BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015091
(413 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 273/327 (83%), Positives = 298/327 (91%), Gaps = 3/327 (0%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE Y+N+CFAHTGEV +VKVIRNKQTGQ+EGYGFIEF S AER+
Sbjct: 87 EVRTLWIGDLQYWMDENYINSCFAHTGEVTSVKVIRNKQTGQVEGYGFIEFGSHGTAERI 146
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NGTPMPNGEQNFRLNWASF G+KRDDTPD TIFVGDLAADVTDY+LQ+TFR YP
Sbjct: 147 LQTYNGTPMPNGEQNFRLNWASFSGGDKRDDTPDFTIFVGDLAADVTDYILQDTFRVHYP 206
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVVIDRLTGRTKGYGFVRFGDESEQ+RAMT+MNG FCSTRPMRIG ATNK V+G
Sbjct: 207 SVKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTDMNGAFCSTRPMRIGLATNKNAVTG 266
Query: 260 QQQYPKASYQNSQV-AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
QQYPKASYQNSQ ++++DPNNTT+FVGNLDS VTD++LRELF +YGQL+HVKIPAGK
Sbjct: 267 -QQYPKASYQNSQTQGENENDPNNTTIFVGNLDSNVTDDNLRELFGRYGQLLHVKIPAGK 325
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQG 378
RCGFVQFADRSCAEEALR+LNGT L GQ+IRLSWGRSPSNKQ QPD NQWNAGYYGYAQG
Sbjct: 326 RCGFVQFADRSCAEEALRLLNGTSLSGQSIRLSWGRSPSNKQPQPDANQWNAGYYGYAQG 385
Query: 379 YENYGYAAAAPQDPSMYYGGYPGYGNY 405
YENYGY A APQDP+MYYG YPGYGNY
Sbjct: 386 YENYGY-APAPQDPNMYYGNYPGYGNY 411
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 271/355 (76%), Positives = 292/355 (82%), Gaps = 12/355 (3%)
Query: 56 WATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIR 115
WAT A P + V P Q E+RTLWIGDLQYWMDE YL TC AHTGEV +VKVIR
Sbjct: 38 WATSAQPPSQS---VAPPQPTSADEVRTLWIGDLQYWMDENYLYTCLAHTGEVASVKVIR 94
Query: 116 NKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDH 174
NKQT Q EGYGFIEF SRAGAERVLQT+NGT MPNG QNFRLNWA+ AGE+R DD+PDH
Sbjct: 95 NKQTSQSEGYGFIEFTSRAGAERVLQTYNGTIMPNGGQNFRLNWATLSAGERRHDDSPDH 154
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
TIFVGDLAADVTDY+LQETFRARYPS KGAKVVIDRLTGRTKGYGFVRFGDESEQ+RAMT
Sbjct: 155 TIFVGDLAADVTDYLLQETFRARYPSIKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMT 214
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
EM GV CSTRPMRIGPA+NK + Q PKASYQN Q AQ++ DPNNTT+FVGNLD V
Sbjct: 215 EMQGVLCSTRPMRIGPASNKNPST--QSQPKASYQNPQGAQNEHDPNNTTIFVGNLDPNV 272
Query: 295 TDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
TD+HLR++F YG+LVHVKIPAGKRCGFVQFADRSCAEEALR+LNGT LGGQN+RLSWGR
Sbjct: 273 TDDHLRQVFGHYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGR 332
Query: 355 SPSNKQAQPDPNQWN----AGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNY 405
SPSNKQAQPD NQWN Y GYENYGYA A QDP+M YG YPGY NY
Sbjct: 333 SPSNKQAQPDANQWNGSGGGYYGYAQGGYENYGYAPAG-QDPNM-YGSYPGYANY 385
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 272/364 (74%), Positives = 296/364 (81%), Gaps = 23/364 (6%)
Query: 48 PQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
P AQPP+ +V P Q E+RTLWIGDLQYWMDE YL TCFAHTGE
Sbjct: 44 PSAQPPSQ-------------SVAPPQPTSADEVRTLWIGDLQYWMDENYLYTCFAHTGE 90
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK 167
+ +VKVIRNKQT Q EGYGFIEF SRAGAERVLQT+NGT MPNG QNFRLNWA+F AGE+
Sbjct: 91 LASVKVIRNKQTSQSEGYGFIEFTSRAGAERVLQTYNGTIMPNGGQNFRLNWATFSAGER 150
Query: 168 R-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDE 226
R DD+PDHTIFVGDLAADVTDY+LQETFRARYPS KGAKVVIDRLTGRTKGYGFVRFGDE
Sbjct: 151 RHDDSPDHTIFVGDLAADVTDYLLQETFRARYPSAKGAKVVIDRLTGRTKGYGFVRFGDE 210
Query: 227 SEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVF 286
SEQ+RAM+EM GV CSTRPMRIGPA+NK + Q PKASYQN Q AQ++ DPNNTT+F
Sbjct: 211 SEQVRAMSEMQGVLCSTRPMRIGPASNKNPST--QSQPKASYQNPQGAQNEHDPNNTTIF 268
Query: 287 VGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
VGNLD VTD+HLR++F QYG+LVHVKIPAGKRCGFVQFADRSCAEEALR+LNGT LGGQ
Sbjct: 269 VGNLDPNVTDDHLRQVFGQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQ 328
Query: 347 NIRLSWGRSPSNKQAQPDPNQWN-----AGYYGYAQGYENYGYAAAAPQDPSMYYGGYPG 401
N+RLSWGRSPSNKQAQPD NQWN Y GYENYGYA A QDP+M YG YPG
Sbjct: 329 NVRLSWGRSPSNKQAQPDANQWNGSGGGGYYGYAQGGYENYGYAPAG-QDPNM-YGSYPG 386
Query: 402 YGNY 405
Y NY
Sbjct: 387 YANY 390
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust.
Identities = 290/421 (68%), Positives = 318/421 (75%), Gaps = 33/421 (7%)
Query: 1 MMQPAPGAVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQA 60
M QP PG PP QYQ Q QQ +MMPPQ QA P MWA A
Sbjct: 2 MQQPGPGMAPPTMGQQPQQQYQQQPPPQQQQP--------YVMMPPQHQA-PQPMWAPSA 52
Query: 61 AAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTG 120
P PQQ E+RTLWIGDLQYWMDE YL TCFAHTGEV +VKVIRNKQT
Sbjct: 53 QPPL-------PQQPASADEVRTLWIGDLQYWMDENYLYTCFAHTGEVSSVKVIRNKQTS 105
Query: 121 QIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGE--KRDDTPDHTIFV 178
Q EGYGFIEF SRAGAER+LQT+NG MPNG Q+FRLNWA+F AGE ++DD+PD+TIFV
Sbjct: 106 QSEGYGFIEFNSRAGAERILQTYNGAIMPNGGQSFRLNWATFSAGERSRQDDSPDYTIFV 165
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDLAADVTDY+LQETFRARY S KGAKVVIDRLTGRTKGYGFVRF +ESEQ+RAMTEM G
Sbjct: 166 GDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSEESEQMRAMTEMQG 225
Query: 239 VFCSTRPMRIGPATNKKTVSGQQQYPKASYQNS--QVAQSDDDPNNTTVFVGNLDSIVTD 296
V CSTRPMRIGPA+NK + Q PKASY NS Q +Q+++DPNNTT+FVGNLD VTD
Sbjct: 226 VLCSTRPMRIGPASNKTPAT--QSQPKASYLNSQPQGSQNENDPNNTTIFVGNLDPNVTD 283
Query: 297 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 356
+HLR++FSQYG+LVHVKIPAGKRCGFVQFADRSCAEEALR+LNGT LGGQN+RLSWGRSP
Sbjct: 284 DHLRQVFSQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSP 343
Query: 357 SNKQAQPDPNQWN---------AGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQ 407
SNKQAQ DPNQWN Y AQGYENYGYA A QDP+M YG YPGY YQ
Sbjct: 344 SNKQAQADPNQWNGAAGAGSGGGYYGYAAQGYENYGYAPAG-QDPNM-YGSYPGYPGYQA 401
Query: 408 P 408
P
Sbjct: 402 P 402
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 271/365 (74%), Positives = 297/365 (81%), Gaps = 21/365 (5%)
Query: 42 MMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTC 101
+MMPPQ QA P AMWA A P A E+RTLWIGDLQYWMDE YL TC
Sbjct: 34 VMMPPQAQA-PQAMWAPSAQPPPQQQPA-------SADEVRTLWIGDLQYWMDENYLYTC 85
Query: 102 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161
FAHTGEV +VKVIRNKQT Q EGYGFIEF SRAGAER+LQT+NG MPNG Q+FRLNWA+
Sbjct: 86 FAHTGEVTSVKVIRNKQTSQSEGYGFIEFNSRAGAERILQTYNGAIMPNGGQSFRLNWAT 145
Query: 162 FGAGEK--RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
F AGE+ DD+PD+TIFVGDLAADVTDY+LQETFRARY S KGAKVVIDRLTGRTKGYG
Sbjct: 146 FSAGERSRHDDSPDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYG 205
Query: 220 FVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQ--VAQSD 277
FVRF DESEQ+RAMTEM GV CSTRPMRIGPA+NK + Q PKASYQNSQ +Q++
Sbjct: 206 FVRFSDESEQVRAMTEMQGVLCSTRPMRIGPASNKTPTT--QSQPKASYQNSQPQGSQNE 263
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRM 337
+DPNNTT+FVGNLD VTD+HLR++FSQYG+LVHVKIPAGKRCGFVQFADRSCAEEALR+
Sbjct: 264 NDPNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFADRSCAEEALRV 323
Query: 338 LNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN-------AGYYGYAQGYENYGYAAAAPQ 390
LNGT LGGQN+RLSWGRSPSNKQAQ DPNQWN Y AQGYENYGYA AA Q
Sbjct: 324 LNGTLLGGQNVRLSWGRSPSNKQAQADPNQWNGGAGSGGGYYGYAAQGYENYGYAPAAGQ 383
Query: 391 DPSMY 395
DP+MY
Sbjct: 384 DPNMY 388
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 274/377 (72%), Positives = 306/377 (81%), Gaps = 18/377 (4%)
Query: 39 PYMMM----MPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMD 94
PYMMM PQPQ QPP MWA A PQ + AVPP E++TLWIGDLQYWMD
Sbjct: 31 PYMMMHPPQPQPQPQTQPPQMWAPNAQPPQQS--AVPPPSSAD--EVKTLWIGDLQYWMD 86
Query: 95 ETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQN 154
E YL CF+HTGEV +VKVIRNKQT Q EGYGF+EFISRAGAERVLQTFNGT MPNG QN
Sbjct: 87 ENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQN 146
Query: 155 FRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTG 213
FRLNWA+F +GEKR DD+PD+TIFVGDLAADV+D+ L E FR RY S KGAKVVIDR TG
Sbjct: 147 FRLNWATFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTG 206
Query: 214 RTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQV 273
RTKGYGFVRF DESEQ+RAMTEM GV CSTRPMRIGPA+NK + Q KASYQN Q
Sbjct: 207 RTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGT---QTSKASYQNPQG 263
Query: 274 -AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAE 332
AQ+++DPNNTT+FVGNLD VTDEHL+++F+QYG+LVHVKIP+GKRCGFVQFADRS AE
Sbjct: 264 GAQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAE 323
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN--AGYY-GYAQGYENYGYAAAAP 389
EALR+LNGT LGGQN+RLSWGRSP+NKQ Q DPNQWN + Y+ GYAQGYENY YA A
Sbjct: 324 EALRVLNGTLLGGQNVRLSWGRSPANKQTQQDPNQWNGSSSYFGGYAQGYENYAYAPPAG 383
Query: 390 QDPSMYYGGYP-GYGNY 405
QDP+M YG YP GY +Y
Sbjct: 384 QDPNM-YGSYPAGYASY 399
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 274/377 (72%), Positives = 305/377 (80%), Gaps = 18/377 (4%)
Query: 39 PYMMM----MPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMD 94
PYMMM PQPQ QPP MWA A PQ + AVPP E+ TLWIGDLQYWMD
Sbjct: 31 PYMMMHPPQPQPQPQTQPPQMWAPNAQPPQQS--AVPPPSSAD--EVETLWIGDLQYWMD 86
Query: 95 ETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQN 154
E YL CF+HTGEV +VKVIRNKQT Q EGYGF+EFISRAGAERVLQTFNGT MPNG QN
Sbjct: 87 ENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQN 146
Query: 155 FRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTG 213
FRLNWA+F +GEKR DD+PD+TIFVGDLAADV+D+ L E FR RY S KGAKVVIDR TG
Sbjct: 147 FRLNWATFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTG 206
Query: 214 RTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQV 273
RTKGYGFVRF DESEQ+RAMTEM GV CSTRPMRIGPA+NK + Q KASYQN Q
Sbjct: 207 RTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGT---QTSKASYQNPQG 263
Query: 274 -AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAE 332
AQ+++DPNNTT+FVGNLD VTDEHL+++F+QYG+LVHVKIP+GKRCGFVQFADRS AE
Sbjct: 264 GAQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAE 323
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN--AGYY-GYAQGYENYGYAAAAP 389
EALR+LNGT LGGQN+RLSWGRSP+NKQ Q DPNQWN + Y+ GYAQGYENY YA A
Sbjct: 324 EALRVLNGTLLGGQNVRLSWGRSPANKQTQQDPNQWNGSSSYFGGYAQGYENYAYAPPAG 383
Query: 390 QDPSMYYGGYP-GYGNY 405
QDP+M YG YP GY +Y
Sbjct: 384 QDPNM-YGSYPAGYASY 399
>gi|224078632|ref|XP_002305583.1| predicted protein [Populus trichocarpa]
gi|222848547|gb|EEE86094.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 263/353 (74%), Positives = 285/353 (80%), Gaps = 8/353 (2%)
Query: 47 QPQAQPPAMWA----TQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF 102
Q Q PP MWA QA+ P Q E+RTLWIGDLQYWMDE Y+ +CF
Sbjct: 11 QTQPPPPHMWAQHQAHQASIPPPQQQQGQGQPPATADEVRTLWIGDLQYWMDENYIASCF 70
Query: 103 AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF 162
AHTGEV +VK+IRNKQT QIEGYGFIE S AER+LQT+NGTPMPNGEQNFRLNWASF
Sbjct: 71 AHTGEVASVKIIRNKQTSQIEGYGFIEMTSHGAAERILQTYNGTPMPNGEQNFRLNWASF 130
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
G+KRDD+PD TIFVGDLAADVTD+MLQETFRA +PS KGAKVVIDRLTGRTKGYGFVR
Sbjct: 131 SGGDKRDDSPDFTIFVGDLAADVTDFMLQETFRAHFPSVKGAKVVIDRLTGRTKGYGFVR 190
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNN 282
FGDESEQLRAMTEMNG FCSTRPMR+G A+NKK V G QQYPKASYQN Q Q+D DPNN
Sbjct: 191 FGDESEQLRAMTEMNGAFCSTRPMRVGLASNKKAVVG-QQYPKASYQNPQ-PQNDGDPNN 248
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ 342
TT+FVGNLDS V D+HL+ELF QYGQL+HVKIPAGKRCGFVQFADRS AEEAL+MLNG Q
Sbjct: 249 TTIFVGNLDSNVMDDHLKELFGQYGQLLHVKIPAGKRCGFVQFADRSSAEEALKMLNGAQ 308
Query: 343 LGGQNIRLSWGRSPSNKQAQPDPN-QWNAGYYGYAQGYENYGYAAAAPQDPSM 394
L GQNIRLSWGR+PSNKQAQPD N Y QGYENYGYA A QDP+M
Sbjct: 309 LSGQNIRLSWGRNPSNKQAQPDANQYGGGYYGYGQQGYENYGYAPAT-QDPNM 360
>gi|225461001|ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/344 (76%), Positives = 293/344 (85%), Gaps = 5/344 (1%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
VA P Q P EIR+LWIGDLQ WM+E YL CF+ TGEVV+VKVIRNKQTGQ EGYGF
Sbjct: 78 VAAP--QASNPEEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGF 135
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVT 186
IE +RA AER+LQT+NGT MPN EQNFRLNWA+ GAGE+R DDTPD+TIFVGDLA+DVT
Sbjct: 136 IELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVT 195
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
DY+LQETFR YPS KGAKVV DR TGR+KGYGFVRFGDE EQLRAM EMNG+FCSTRPM
Sbjct: 196 DYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPM 255
Query: 247 RIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 306
RIGPA KK V GQQ + KAS+QN+Q Q + DPNNTT+FVG LDS VTD++LR++FSQY
Sbjct: 256 RIGPAATKKPVGGQQ-FQKASFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQY 314
Query: 307 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPN 366
G+LVHVKIP GKRCGFVQFA+R+CAE+AL LNGTQLG Q+IRLSWGRSPSNKQAQPD
Sbjct: 315 GELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQA 374
Query: 367 QWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 410
QWN GYYGYAQGYE YGY A PQDP+MYYG YPGYGNYQQPQQ
Sbjct: 375 QWNGGYYGYAQGYEAYGY-APPPQDPNMYYGAYPGYGNYQQPQQ 417
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 276/418 (66%), Positives = 308/418 (73%), Gaps = 38/418 (9%)
Query: 3 QPAPGAVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAA 62
QP G PP QY QAPPQQ PY+MM P PQA +WA A
Sbjct: 1 QPGHGIAPPNIGQQPPQQYH---QAPPQQ-------PYVMMPPQAPQA----LWAQSAQ- 45
Query: 63 PQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI 122
PPQQ E+RTLWIGDLQYWMDE YL TCF +TGEV +VKVIRNKQT Q
Sbjct: 46 --------PPQQPASADEVRTLWIGDLQYWMDENYLYTCFGNTGEVTSVKVIRNKQTSQS 97
Query: 123 EGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK---RDDTPDHTIFVG 179
EGYGFIEF +RA AERVLQT+ G MPNG Q++RLNWA+F AGE+ +DD PDHTIFVG
Sbjct: 98 EGYGFIEFNTRASAERVLQTYQGAIMPNGGQSYRLNWATFSAGERSSRQDDGPDHTIFVG 157
Query: 180 DLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
DLAADVTDY+LQETFRARY S KGAKVVIDRLTGR+KGYGFVRF DE EQ+RAMTEM GV
Sbjct: 158 DLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSKGYGFVRFADEGEQMRAMTEMQGV 217
Query: 240 FCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 299
CSTRPMRIGPATNK + Q KASY N+ QS++DPNNTT+FVGNLD VTD+HL
Sbjct: 218 LCSTRPMRIGPATNKNPAATTQ--AKASYSNTPGGQSENDPNNTTIFVGNLDPNVTDDHL 275
Query: 300 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
R++FSQYG+LVHVKIP+GKRCGFVQF+DRS AEEA+R+LNGT LGGQN+RLSWGR+PSNK
Sbjct: 276 RQVFSQYGELVHVKIPSGKRCGFVQFSDRSSAEEAIRVLNGTLLGGQNVRLSWGRTPSNK 335
Query: 360 QAQPDPNQWN--------AGYYGYAQGYENYGYAAA-APQDPSMYYGGYPGYGNYQQP 408
Q Q DPNQWN Y GYENYGYAAA A QDP++ YG YPGY YQ P
Sbjct: 336 QTQQDPNQWNAAAAGGGGGYYGYPQGGYENYGYAAAPAGQDPNV-YGSYPGYAGYQHP 392
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 270/375 (72%), Positives = 304/375 (81%), Gaps = 16/375 (4%)
Query: 39 PYMMM--MPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDET 96
PYMMM PQPQ QPP MWA PQ + AVPP E++TLWIGDLQYWMDE
Sbjct: 31 PYMMMHPPQPQPQTQPPQMWAPNTQPPQQS--AVPPPTSAD--EVKTLWIGDLQYWMDEN 86
Query: 97 YLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFR 156
YL CF+HTGEV +VKVIRNK Q EGYGF+EFISRAGAERVLQT+NGT MPNG QNFR
Sbjct: 87 YLYNCFSHTGEVGSVKVIRNKLNNQSEGYGFLEFISRAGAERVLQTYNGTIMPNGGQNFR 146
Query: 157 LNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRT 215
LNWA+F +GEKR DD+PD+TIFVGDLAADV+D+ L E FR RY S KGAKVVIDR TGR+
Sbjct: 147 LNWATFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGRS 206
Query: 216 KGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQV-A 274
KGYGFVRF DESEQ+RAMTEM GV CSTRPMRIGPA+NK + Q KASYQN Q A
Sbjct: 207 KGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGT---QTSKASYQNPQGGA 263
Query: 275 QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEA 334
Q+++DPNNTT+FVGNLD VTDEHL+++F+QYG+LVHVKIP+GKRCGFVQFADRS AEEA
Sbjct: 264 QNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEA 323
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN--AGYY-GYAQGYENYGYAAAAPQD 391
LR+LNGT LGGQN+RLSWGRSP+NKQ Q DPNQWN +GY+ GYAQGYENY YA A QD
Sbjct: 324 LRVLNGTLLGGQNVRLSWGRSPANKQTQQDPNQWNGSSGYFGGYAQGYENYAYAPPAGQD 383
Query: 392 PSMYYGGYP-GYGNY 405
P+M YG YP GY +Y
Sbjct: 384 PNM-YGSYPAGYASY 397
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 259/326 (79%), Positives = 285/326 (87%), Gaps = 6/326 (1%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P Q E+RTLWIGDLQYWMDE Y+ CFAHTGEV +VKVIRNKQTGQ EGYGFIEF+
Sbjct: 56 PPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFL 115
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYML 190
+R AERVLQT+NGT MPNG QNFRLNWAS AGEKR DD+PD+TIFVGDLA DVTDY+L
Sbjct: 116 TRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVL 173
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
QETFRARY S KGAKVVIDRLTGRTKGYGFV+FGDESEQ+RAMTEMNGV CS+RPMRIGP
Sbjct: 174 QETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGP 233
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
A NK T SG QQ+ K SYQN Q AQ+++DPNNTT+FVGNLD+ VTDEHLR++F QYG+LV
Sbjct: 234 AANKNT-SGGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELV 292
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN- 369
HVKIP GKRCGFVQFADR+CAEEALR+LNGTQ+GGQNIRLSWGRSPSNKQ Q DPNQWN
Sbjct: 293 HVKIPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNG 352
Query: 370 AGYYGYAQGYENYGYAAAAPQDPSMY 395
GYYGY QGYENY Y A APQDP+M+
Sbjct: 353 GGYYGYGQGYENYSY-APAPQDPNMF 377
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 277/360 (76%), Positives = 302/360 (83%), Gaps = 13/360 (3%)
Query: 63 PQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI 122
PQA P Q E+RTLWIGDLQYWMDE Y+ CFAHTGEV +VKVIRNKQTGQ
Sbjct: 47 PQAGSPQGQPPQPANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQS 106
Query: 123 EGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDL 181
EGYGFIEF++R AERVLQT+NGT MPNG QNFRLNWAS AGEKR DD+PD+TIFVGDL
Sbjct: 107 EGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGDL 164
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
A DVTDY+LQETFRARY S KGAKVVIDRLTGRTKGYGFV+FGDESEQ+RAMTEMNGV C
Sbjct: 165 AGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHC 224
Query: 242 STRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 301
S+RPMRIGPA NK T SG QQ+ K SYQN Q+++DPNNTT+FVGNLDS VTDEHLR+
Sbjct: 225 SSRPMRIGPAANKNT-SGSQQFSKTSYQNPPGTQNENDPNNTTIFVGNLDSNVTDEHLRQ 283
Query: 302 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
+FSQYG+LVHVKIPAGKRCGFVQF+DRSCAEEALR+LNGT +GGQNIRLSWGRSPSNKQ
Sbjct: 284 VFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRILNGTPIGGQNIRLSWGRSPSNKQP 343
Query: 362 QPDPNQWN------AGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQP--QQPQQ 413
Q DPNQWN GYYGY QGYENY YA AA QDP+M+Y GY GYGNYQQP QQP Q
Sbjct: 344 QADPNQWNGGGGGGGGYYGYGQGYENYSYAPAA-QDPNMFYSGYGGYGNYQQPATQQPSQ 402
>gi|147859325|emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/338 (75%), Positives = 284/338 (84%), Gaps = 9/338 (2%)
Query: 74 QQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISR 133
Q P EIR+LWIGDLQ WM+E Y CF+ TGEVV+VKVIRNKQTGQ EGYGFIE +R
Sbjct: 67 QASNPEEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATR 126
Query: 134 AGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQE 192
A AER+LQT+NGT MPN EQNFRLNWA+ GAGE+R DDTPD+TIFVGDLA+DVTDY+LQE
Sbjct: 127 AAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQE 186
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
TFR YPS KGAKVV DR TGR+KGYGFVRFGDE EQLRAM EMNG+FCSTRPMRIGPA
Sbjct: 187 TFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAA 246
Query: 253 NKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 312
KK V AS+QN+Q Q + DPNNTT+FVG LDS VTD++LR++FSQYG+LVHV
Sbjct: 247 TKKPVG-------ASFQNTQGXQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHV 299
Query: 313 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGY 372
KIP GKRCGFVQFA+R+CAE+AL LNGTQLG Q+IRLSWGRSPSNKQAQPD QWN GY
Sbjct: 300 KIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGY 359
Query: 373 YGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 410
YGYAQGYE YGY A PQDP+MYYG YPGYGNYQQPQQ
Sbjct: 360 YGYAQGYEAYGY-APPPQDPNMYYGAYPGYGNYQQPQQ 396
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
gi|297335725|gb|EFH66142.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 261/397 (65%), Positives = 296/397 (74%), Gaps = 34/397 (8%)
Query: 1 MMQPAPGAVPP--PPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWAT 58
M QP PG + P PPP A QY YQQ PSPY + P PP MW
Sbjct: 2 MQQPPPGGILPHHAPPPSAQQQYGYQQ-----------PSPYGIAGAAPP---PPQMWNP 47
Query: 59 QAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ 118
QAAAP P Q EIRTLWIGDLQYWMDE +L CFAHTGE+V+ KVIRNKQ
Sbjct: 48 QAAAP-------PSAQPMTVDEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQ 100
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDHTIF 177
TGQ+EGYGFIEF S A AERVLQTFN P+P+ +Q FRLNWAS +G+KRDD+PD+TIF
Sbjct: 101 TGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIF 160
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDLAADVTDY+L ETFRA YPS KGAKVVIDR TGRTKGYGFVRF DESEQ+RAMTEMN
Sbjct: 161 VGDLAADVTDYILLETFRASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTEMN 220
Query: 238 GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQ-SDDDPNNTTVFVGNLDSIVTD 296
GV CSTRPMRIGPA +KK V+GQ + SYQ++ +D+DPNNTTVFVG LD VTD
Sbjct: 221 GVPCSTRPMRIGPAASKKGVTGQ----RDSYQSAAGGVPTDNDPNNTTVFVGGLDQSVTD 276
Query: 297 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 356
+HL+ +F QYG++VHVKIPAGKRCGFVQF+++SCAEEALRMLNG QLGG +RLSWGRSP
Sbjct: 277 DHLKNVFGQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSP 336
Query: 357 SNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPS 393
SNKQ+ DP+Q+ G GY QG E YGY PQDP+
Sbjct: 337 SNKQSA-DPSQFYYG--GYGQGQEQYGY--TMPQDPN 368
>gi|75334880|sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45 [Nicotiana plumbaginifolia]
Length = 409
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/360 (67%), Positives = 276/360 (76%), Gaps = 10/360 (2%)
Query: 56 WATQAAAPQAAGVAVP---PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
WA Q + Q +A P G P E+R+LWIGDLQYWMDE YL+TCF HTGE+V+ K
Sbjct: 55 WAQQPSQQQYGAMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAK 114
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP 172
VIRNKQTGQ EGYGF+EF S A AE +LQT+NGT MPN EQNFR+NWAS GAGE+RDD+
Sbjct: 115 VIRNKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSA 174
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+HTIFVGDLAADVTDY+LQETF++ Y S +GAKVV DR+TGR+KGYGFV+F DESEQLRA
Sbjct: 175 EHTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRA 234
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDS 292
MTEMNGV CSTRPMRIGPA NKK V Q KA+YQN Q Q + DPNNTT+FVG LD
Sbjct: 235 MTEMNGVLCSTRPMRIGPAANKKPVGTPQ---KATYQNPQATQGESDPNNTTIFVGGLDP 291
Query: 293 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352
V +EHLR++FS YG+LVHVKI AGKRCGFVQF R+ AE+AL LNGTQLGGQ+IRLSW
Sbjct: 292 TVAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSW 351
Query: 353 GRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAP--QDPSMYYGGYPGYGNYQQPQQ 410
GRSPS+KQ D QW Y + Y AP QDP+MYYG YPGY NYQQPQQ
Sbjct: 352 GRSPSSKQT--DQTQWGGSGGAYYGYGQGYEAYGYAPPAQDPNMYYGNYPGYANYQQPQQ 409
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75336898|sp|Q9SAB3.1|RB45B_ARATH RecName: Full=Polyadenylate-binding protein RBP45B;
Short=Poly(A)-binding protein RBP45B; AltName:
Full=RNA-binding protein 45B; Short=AtRBP45B
gi|4835793|gb|AAD30259.1|AC007296_20 Similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains. ESTs gb|T44278, gb|R65195, gb|N65904,
gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166,
gb|N96891, gb|W43137, gb|F15504, gb|F15495 and gb|Z30868
come from this gene [Arabidopsis thaliana]
gi|20260604|gb|AAM13200.1| similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains [Arabidopsis thaliana]
gi|30725662|gb|AAP37853.1| At1g11650 [Arabidopsis thaliana]
gi|332190643|gb|AEE28764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 405
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 260/397 (65%), Positives = 295/397 (74%), Gaps = 36/397 (9%)
Query: 1 MMQPAPGAVPP--PPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWAT 58
M QP PG + P PPP A QY YQQ PP PP MW
Sbjct: 2 MQQPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPP----------------PPQMWNP 45
Query: 59 QAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ 118
QAAAP P Q EIRTLWIGDLQYWMDE +L CFAHTGE+V+ KVIRNKQ
Sbjct: 46 QAAAP-------PSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQ 98
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDHTIF 177
TGQ+EGYGFIEF S A AERVLQTFN P+P+ +Q FRLNWAS +G+KRDD+PD+TIF
Sbjct: 99 TGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIF 158
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDLAADVTDY+L ETFRA YPS KGAKVVIDR+TGRTKGYGFVRF DESEQ+RAMTEMN
Sbjct: 159 VGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMN 218
Query: 238 GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQV-AQSDDDPNNTTVFVGNLDSIVTD 296
GV CSTRPMRIGPA +KK V+GQ+ SYQ+S +D+DPNNTTVFVG LD+ VTD
Sbjct: 219 GVPCSTRPMRIGPAASKKGVTGQRD----SYQSSAAGVTTDNDPNNTTVFVGGLDASVTD 274
Query: 297 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 356
+HL+ +FSQYG++VHVKIPAGKRCGFVQF+++SCAEEALRMLNG QLGG +RLSWGRSP
Sbjct: 275 DHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSP 334
Query: 357 SNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPS 393
SNKQ+ DP+Q+ Y GY QG E YGY PQDP+
Sbjct: 335 SNKQSG-DPSQFY--YGGYGQGQEQYGY--TMPQDPN 366
>gi|255563907|ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223537765|gb|EEF39383.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 404
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/329 (74%), Positives = 277/329 (84%), Gaps = 5/329 (1%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
I++LWIGDLQ WMDE YL F+ TGEVV+ KVIRNKQTG EGYGFIEFI+RA AER+L
Sbjct: 65 IKSLWIGDLQQWMDEGYLFNIFSGTGEVVSAKVIRNKQTGMPEGYGFIEFINRAAAERIL 124
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
QT+NGT MPN EQNFRLNWA+ AGE+R DD PD+T+FVGDLA DV D++LQETFR YP
Sbjct: 125 QTYNGTQMPNTEQNFRLNWATLAAGERRQDDGPDYTVFVGDLAPDVNDFILQETFRTVYP 184
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVV DRLTGRTKGYGFVRFGDE+EQ RAM EMNG +CSTR MRIGPA KK
Sbjct: 185 SVKGAKVVTDRLTGRTKGYGFVRFGDENEQRRAMVEMNGQYCSTRAMRIGPAATKKPAV- 243
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
QQY KA YQ++Q Q ++DPNNTT+FVG LD V+DEHLR++F +YG+LVHVKIPAGKR
Sbjct: 244 -QQYQKAPYQSTQGTQGENDPNNTTIFVGALDPSVSDEHLRQVFGKYGELVHVKIPAGKR 302
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGY 379
CGFVQFA+R+CAE+AL LNGTQL GQ+IRLSWGRSPSNKQAQPD +QWN GYYGYAQGY
Sbjct: 303 CGFVQFANRACAEQALLGLNGTQLAGQSIRLSWGRSPSNKQAQPDQSQWNGGYYGYAQGY 362
Query: 380 ENYGYAAAAPQDPSMYYGGYPGYGNYQQP 408
+ YGY A PQDP+MYY GYPGYGNYQQP
Sbjct: 363 DAYGY--APPQDPNMYYSGYPGYGNYQQP 389
>gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 404
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 258/397 (64%), Positives = 294/397 (74%), Gaps = 36/397 (9%)
Query: 1 MMQPAPGAVPP--PPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWAT 58
M QP PG + P PPP A QY YQQ PP PP MW
Sbjct: 1 MQQPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPP----------------PPQMWNP 44
Query: 59 QAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ 118
QAAAP P Q EIRTLWIGDLQYWMDE +L CFAHTGE+V+ KVIRNKQ
Sbjct: 45 QAAAP-------PSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQ 97
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDHTIF 177
TGQ+EGYGFIEF S A AERVLQTFN P+P+ +Q FRL WAS +G+KRDD+PD+TIF
Sbjct: 98 TGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLXWASLSSGDKRDDSPDYTIF 157
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDLAADVTDY+L ETFRA YPS KGAKVVI+R+TGRTKGYGFVRF DESEQ+RAMTEMN
Sbjct: 158 VGDLAADVTDYILLETFRASYPSVKGAKVVINRVTGRTKGYGFVRFSDESEQIRAMTEMN 217
Query: 238 GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQV-AQSDDDPNNTTVFVGNLDSIVTD 296
GV CSTRPMRIGPA +KK V+GQ+ SYQ+S +D+DPNNTTVFVG LD+ VTD
Sbjct: 218 GVPCSTRPMRIGPAASKKGVTGQRD----SYQSSAAGVTTDNDPNNTTVFVGGLDASVTD 273
Query: 297 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 356
+HL+ +FSQYG++VHVKIPAGKRCGFVQF+++SCAEEALRMLNG QLGG +RLSWGRSP
Sbjct: 274 DHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSP 333
Query: 357 SNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPS 393
SNKQ+ DP+Q+ Y GY QG E YGY PQDP+
Sbjct: 334 SNKQSG-DPSQFY--YGGYGQGQEQYGY--TMPQDPN 365
>gi|218193173|gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/329 (70%), Positives = 271/329 (82%), Gaps = 5/329 (1%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQ+WM+E YL CF+ GE+++ K+IRNKQTGQ EGYGFIEF S A AE+V
Sbjct: 65 EVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQV 124
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NG MPNG Q F+LNWA+ GAGEKR DD D+TIFVGDLA+DVTD +LQ+TF+A Y
Sbjct: 125 LQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHY 184
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKVV DR TGR+KGYGFV+FGD EQ RAMTEMNG +CS+RPMRIGPA+NKK +
Sbjct: 185 QSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIG 244
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
GQQQ P A+YQN+Q SD DPNNTTVFVG LD VTDE L++ FS YG+LV+VKIP GK
Sbjct: 245 GQQQ-PSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGK 303
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGY-AQ 377
RCGFVQ+++R+ AEEA+RMLNG+QLGGQ+IRLSWGRSP NKQ Q D NQWNAGYYGY Q
Sbjct: 304 RCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQ 363
Query: 378 GYENYGYAAAAPQDPSMY-YGGYPGYGNY 405
GY+ YGY A PQDP+MY Y YPGYGNY
Sbjct: 364 GYDPYGY-ARPPQDPAMYAYAAYPGYGNY 391
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 402
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/329 (70%), Positives = 270/329 (82%), Gaps = 5/329 (1%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQ+WM+E YL CF+ GE+++ K+IRNKQTGQ EGYGFIEF S A AE+V
Sbjct: 65 EVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQV 124
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NG MPNG Q F+LNWA+ GAGEKR DD D+TIFVGDLA+DVTD +LQ+TF+A Y
Sbjct: 125 LQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHY 184
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKVV DR TGR+KGYGFV+FGD EQ RAMTEMNG +CS+RPMRIGPA+NKK +
Sbjct: 185 QSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIG 244
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
GQQQ P A+YQN+Q SD DPNNTTVFVG LD VTDE L++ FS YG+LV+VKIP GK
Sbjct: 245 GQQQ-PSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGK 303
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGY-AQ 377
RCGFVQ+++R+ AEEA+RMLNG+QLGGQ+IRLSWGRSP NKQ Q D NQWNAGYYGY Q
Sbjct: 304 RCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQ 363
Query: 378 GYENYGYAAAAPQDPSMY-YGGYPGYGNY 405
GY+ YGY PQDP+MY Y YPGYGNY
Sbjct: 364 GYDPYGY-VRPPQDPAMYAYAAYPGYGNY 391
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/329 (70%), Positives = 270/329 (82%), Gaps = 5/329 (1%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQ+WM+E YL CF+ GE+++ K+IRNKQTGQ EGYGFIEF S A AE+V
Sbjct: 65 EVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQV 124
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NG MPNG Q F+LNWA+ GAGEKR DD D+TIFVGDLA+DVTD +LQ+TF+A Y
Sbjct: 125 LQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHY 184
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKVV DR TGR+KGYGFV+FGD EQ RAMTEMNG +CS+RPMRIGPA+NKK +
Sbjct: 185 QSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIG 244
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
GQQQ P A+YQN+Q SD DPNNTTVFVG LD VTDE L++ FS YG+LV+VKIP GK
Sbjct: 245 GQQQ-PSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGK 303
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGY-AQ 377
RCGFVQ+++R+ AEEA+RMLNG+QLGGQ+IRLSWGRSP NKQ Q D NQWNAGYYGY Q
Sbjct: 304 RCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQ 363
Query: 378 GYENYGYAAAAPQDPSMY-YGGYPGYGNY 405
GY+ YGY PQDP+MY Y YPGYGNY
Sbjct: 364 GYDPYGY-VRPPQDPAMYAYAAYPGYGNY 391
>gi|116789456|gb|ABK25253.1| unknown [Picea sitchensis]
Length = 487
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/336 (69%), Positives = 267/336 (79%), Gaps = 14/336 (4%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
QQ E+RTLW+GDLQYWMDETY+ +CF + EVV+VK+IRNKQTGQ EGYGF+EF S
Sbjct: 70 QQPTSADEVRTLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFAS 129
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQ 191
AGAER LQ NG MPN EQ +RLNWA+FG GEKR + PD+ IFVGDLA+DVTDY+LQ
Sbjct: 130 HAGAERFLQNHNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQ 189
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETFR+RY + KGAKVV DR+TGR+KGYGFVRFGDE+EQ+RAMTEMNG+FCS+RPMR GPA
Sbjct: 190 ETFRSRYQTVKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTEMNGMFCSSRPMRTGPA 249
Query: 252 TNKKTVSGQQQYPKASYQN-SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
T KKT QQ YPKA+ QV SD+DPNNTT+FVG LD VTDE LR+LF Q+G+LV
Sbjct: 250 TTKKTTGFQQPYPKAAAAVPPQVVASDNDPNNTTIFVGGLDPSVTDEMLRQLFGQFGELV 309
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA--------- 361
HVKIP GKRCGFVQF +R+ AEEAL+ML+GT LG Q IRLSWGRSP+NKQ
Sbjct: 310 HVKIPVGKRCGFVQFNNRASAEEALQMLHGTVLGQQAIRLSWGRSPANKQVQTPGWVQPQ 369
Query: 362 QPDPNQWN-AGYYGYAQGYE-NYGYAAAAPQDPSMY 395
QPDPNQWN A YYGY QGY+ YGY A PQDP+MY
Sbjct: 370 QPDPNQWNGAAYYGYGQGYDAGYGY-APQPQDPNMY 404
>gi|148910710|gb|ABR18422.1| unknown [Picea sitchensis]
Length = 418
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/349 (67%), Positives = 271/349 (77%), Gaps = 15/349 (4%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
QQ E+RTLW+GDLQYWMDETY+ +CF + EVV+VK+IRNKQTGQ EGYGF+EF S
Sbjct: 70 QQPTSADEVRTLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFAS 129
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQ 191
AGAER LQ NG MPN EQ +RLNWA+FG GEKR + PD+ IFVGDLA+DVTDY+LQ
Sbjct: 130 HAGAERFLQNHNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQ 189
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETFR+RY + KGAKVV DR+TGR+KGYGFVRFGDE+EQ+RAMTEMNG+FCS+RPMR GPA
Sbjct: 190 ETFRSRYQTVKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTEMNGMFCSSRPMRTGPA 249
Query: 252 TNKKTVSGQQQY--PKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 309
T KKT QQ Y A+ QV SD+DPNNTT+FVG LD VTDE LR+LF Q+G+L
Sbjct: 250 TTKKTTGFQQPYPKAAAAAVPPQVVASDNDPNNTTIFVGGLDPSVTDEMLRQLFGQFGEL 309
Query: 310 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA-------- 361
VHVKIP GKRCGFVQF +R+ AEEAL+ML+GT LG Q IRLSWGRSP+NKQ
Sbjct: 310 VHVKIPVGKRCGFVQFNNRASAEEALQMLHGTVLGQQAIRLSWGRSPANKQVQTPGWVQP 369
Query: 362 -QPDPNQWN-AGYYGYAQGYE-NYGYAAAAPQDPSMYYGGYPGYGNYQQ 407
QPDPNQWN A YYGY QGY+ YGY A PQDP+MY YGNYQQ
Sbjct: 370 QQPDPNQWNGAAYYGYGQGYDAGYGY-APQPQDPNMYSYAPYAYGNYQQ 417
>gi|224115306|ref|XP_002316998.1| predicted protein [Populus trichocarpa]
gi|222860063|gb|EEE97610.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/291 (73%), Positives = 246/291 (84%), Gaps = 3/291 (1%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
EI++LWIGDLQ WMDE YL + F+ TGE+V KVIRNKQTG EGYGFIEF+SRA AER+
Sbjct: 67 EIKSLWIGDLQQWMDENYLLSIFSATGEIVQAKVIRNKQTGYPEGYGFIEFVSRAAAERI 126
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQT+NGTPMPN EQ FRLNWA+ GAGE+R DD PD T+FVGDLAADV DY+LQETFR Y
Sbjct: 127 LQTYNGTPMPNSEQAFRLNWATLGAGERRQDDGPDFTVFVGDLAADVNDYLLQETFRNVY 186
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS KGAKVV DR+TGR+KGYGF+RF DE+EQ RAM EMNG +CSTRPMRIGPA KK ++
Sbjct: 187 PSVKGAKVVTDRVTGRSKGYGFIRFADENEQRRAMVEMNGQYCSTRPMRIGPAATKKPLT 246
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
QQY KA+YQN Q Q ++DPNNTT+FVG LD VTD+ LR +FS+YG+LVHVKIPAGK
Sbjct: 247 --QQYQKATYQNPQGNQGENDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGK 304
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN 369
RCGFVQFA+R+ AE+AL MLNGTQ+ GQNIRLSWGRSPSNKQ QPD +QWN
Sbjct: 305 RCGFVQFANRTSAEQALSMLNGTQIAGQNIRLSWGRSPSNKQVQPDQSQWN 355
>gi|168064363|ref|XP_001784132.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664332|gb|EDQ51056.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 453
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/353 (64%), Positives = 266/353 (75%), Gaps = 23/353 (6%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E++TLW+GDLQYWMDE YL+T F HTGEV +VK+IRNKQTG EGYGF+EF+S AE++
Sbjct: 41 EVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHVAAEKI 100
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NGT MPN EQ FRLNWASFG GE+R + P+H+IFVGDLA DVTDYMLQETFR RY
Sbjct: 101 LQAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRY 160
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS KGAKVV D TGR+KGYGFVRFGDE E+ RAM+EMNG++CS+RPMRI AT KK++
Sbjct: 161 PSVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGIYCSSRPMRISAATPKKSLG 220
Query: 259 GQQQYPK------ASYQ------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 306
Q PK A+Y + Q +D+DPNNTT+FVG LD V DE LR +F Q+
Sbjct: 221 PNQLNPKVSPVAVATYAAYGAQPSPQAFPTDNDPNNTTIFVGGLDPAVGDEDLRNVFGQF 280
Query: 307 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA----- 361
G+LV+VKIPAGK CGFVQF R+CAEEAL+ L+ T +G Q +RLSWGRSP NKQ
Sbjct: 281 GELVYVKIPAGKGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQTSDPAW 340
Query: 362 --QPDPNQWN-AGYY-GYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQ 409
DPNQWN AGYY GYAQGY+ YGY A APQDP+ YG YPGYGNY Q Q
Sbjct: 341 GHHQDPNQWNAAGYYQGYAQGYDQYGYPAPAPQDPAYAQYGNYPGYGNYPQQQ 393
>gi|30524689|emb|CAC85246.1| salt tolerance protein 6 [Beta vulgaris]
Length = 322
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/304 (71%), Positives = 252/304 (82%), Gaps = 8/304 (2%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
MDE Y+ TCFA +GE+V VK+IRNKQT Q E YGFIEF + A AER+LQT+N T MPN E
Sbjct: 1 MDENYIRTCFAQSGELVNVKIIRNKQTMQSECYGFIEFSTHAAAERILQTYNNTLMPNVE 60
Query: 153 QNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
QN+RLNWA +G+GEKR +D D+TIFVGDLA DVTDY LQETFR RYPS KGAKVVIDRL
Sbjct: 61 QNYRLNWAFYGSGEKRGEDASDYTIFVGDLAPDVTDYTLQETFRVRYPSVKGAKVVIDRL 120
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNS 271
T R+KGYGFVRFGDESEQ RAM+EMNG+ C R MRIG A NKK+V G ASYQN+
Sbjct: 121 TSRSKGYGFVRFGDESEQARAMSEMNGMMCLGRAMRIGAAANKKSVGG-----TASYQNN 175
Query: 272 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 331
Q +D DP+NTT+FVGNLDS VTDEHLR+ FS YG+LVHVKIPAGK+CGFVQF +RS A
Sbjct: 176 QGTPNDSDPSNTTIFVGNLDSNVTDEHLRQTFSPYGELVHVKIPAGKQCGFVQFTNRSSA 235
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQW-NAGYYGYAQGYENYGYAAAAPQ 390
EEALR+LNG QLGG+N+RLSWGRSP+N+Q+QPD NQW NA YYGY QGY++YGY +APQ
Sbjct: 236 EEALRVLNGMQLGGRNVRLSWGRSPNNRQSQPDQNQWNNAAYYGYPQGYDSYGY-VSAPQ 294
Query: 391 DPSM 394
DP+M
Sbjct: 295 DPNM 298
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 60 AAAPQAAGVAVPPQQQGQPGEI----RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIR 115
A G A QG P + T+++G+L + + +L F+ GE+V VK+
Sbjct: 161 ANKKSVGGTASYQNNQGTPNDSDPSNTTIFVGNLDSNVTDEHLRQTFSPYGELVHVKIPA 220
Query: 116 NKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159
KQ GF++F +R+ AE L+ NG M G +N RL+W
Sbjct: 221 GKQC------GFVQFTNRSSAEEALRVLNG--MQLGGRNVRLSW 256
>gi|40253807|dbj|BAD05744.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
gi|40253847|dbj|BAD05783.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
Length = 427
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/330 (68%), Positives = 262/330 (79%), Gaps = 11/330 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE Y++ CFA TGE+ +VK+IR+KQTGQ++GYGFIEF S AGAERV
Sbjct: 93 EVRTLWIGDLQYWMDENYISACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERV 152
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN EQ +RLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 153 LQTYNGAMMPNVEQTYRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYILQETFRVHYP 210
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVV D++T R+KGYGFV+FGD SEQ RAMTEMNG+ CS+RPMRIGPA NKK
Sbjct: 211 SVKGAKVVTDKMTMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRIGPAANKKATGV 270
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
Q++ P A Q QSD DP+NTT+FVG LD VTD+ L+++F+ YG +VHVKIP GKR
Sbjct: 271 QEKVPSA-----QGVQSDSDPSNTTIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKR 325
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQW-NAGYYGYA 376
CGFVQFA+R+ A+EAL +L GT +GGQN+RLSWGRSPSN+QAQP D NQW A Y
Sbjct: 326 CGFVQFANRASADEALVLLQGTLIGGQNVRLSWGRSPSNRQAQPQQDSNQWGGANAGYYG 385
Query: 377 QGYENYGYAAAAPQDPSMY-YGGYPGYGNY 405
G GY A PQDP+MY YG Y GY NY
Sbjct: 386 YGQGYEGYGYAQPQDPNMYGYGAYAGYPNY 415
>gi|168049769|ref|XP_001777334.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168061528|ref|XP_001782740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665773|gb|EDQ52446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671310|gb|EDQ57864.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 416
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/357 (64%), Positives = 267/357 (74%), Gaps = 28/357 (7%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E++TLW+GDLQYWMDE YL+T F HTGEV +VK+IRNKQTG EGYGF+EF+S A AE++
Sbjct: 6 EVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHAAAEKI 65
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NGT MPN EQ FRLNWASFG GE+R + P+H+IFVGDLA DVTDYMLQETFR RY
Sbjct: 66 LQAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRY 125
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS KGAKVV D TGR+KGYGFVRFGDE E+ RAM+EMNGV+CS+RPMRI AT KK++
Sbjct: 126 PSVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGVYCSSRPMRISAATPKKSLG 185
Query: 259 GQQQYPK---------ASYQ------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELF 303
Q PK A+Y + Q D+DPNNTT+FVG LD V DE LR +F
Sbjct: 186 PAQLNPKVDAVSPVAVATYAAYGAQPSPQAFPVDNDPNNTTIFVGGLDPAVGDEDLRNVF 245
Query: 304 SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ-AQ 362
Q+G+LV+VKIPAGK CGFVQF R+CAEEAL+ L+ T +G Q +RLSWGRSP NKQ A
Sbjct: 246 GQFGELVYVKIPAGKGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQTAD 305
Query: 363 P------DPNQWNAG--YYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQ 410
P DPNQWNAG Y GYAQGY+ YGY A PQDP+ YG YPGYGNY PQQ
Sbjct: 306 PGWGQHQDPNQWNAGGYYQGYAQGYDQYGYPAQPPQDPAYAQYGNYPGYGNY--PQQ 360
>gi|413921124|gb|AFW61056.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/423 (59%), Positives = 287/423 (67%), Gaps = 39/423 (9%)
Query: 7 GAVPPPPPPMAAHQYQYQQQAPPQ-----------QQPPPQPSPYMMMMPPQPQAQPPAM 55
G +PPP P HQY Q Q PPP + Y +PP P A
Sbjct: 26 GGIPPPMAPQ--HQYAPQMWGQAPPPPPPPQAAYGQAPPPPQAAYGQALPP-----PQAA 78
Query: 56 WATQAAAPQAA------GVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVV 109
+ PQAA A P E+RTLWIGDLQYWMD+ Y+ CFA TGEV
Sbjct: 79 YGQAPPPPQAAYYGAVPAPAAVAAAPVGPSEVRTLWIGDLQYWMDDNYIYGCFASTGEVQ 138
Query: 110 AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRD 169
VK+IR+K TGQ++GYGFIEFISRA AERVLQT+NGT MPN E FRLNWAS AGEKRD
Sbjct: 139 NVKLIRDKHTGQLQGYGFIEFISRAAAERVLQTYNGTMMPNVELPFRLNWAS--AGEKRD 196
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
DTPD+TIFVGDLAADVTDY+LQETFRA YPS KGAKVV D+LT RTKGYGFV+FGD +EQ
Sbjct: 197 DTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPNEQ 256
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGN 289
RAMTEMNG+ CS+RPMRIGPA NKK Q++ P A Q QSD+DPNNTT+FVG
Sbjct: 257 ARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKVPSA-----QGVQSDNDPNNTTIFVGG 311
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 349
LD VT++ L+++F+ YG +VHVKIP GKRCGFVQ+A+RS AEEAL +L GT +GGQN+R
Sbjct: 312 LDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRSSAEEALVILQGTLVGGQNVR 371
Query: 350 LSWGRSPSNKQAQP--DPNQWNAGYYGYAQGYENYGYAAAAP--QDPSMY---YGGYPGY 402
LSWGRSPSNKQ QP D NQW AG GY A P QDP+MY G Y GY
Sbjct: 372 LSWGRSPSNKQVQPQQDSNQW-AGANAGYYGYGQGYEAYGYPQSQDPNMYNYGAGAYAGY 430
Query: 403 GNY 405
NY
Sbjct: 431 PNY 433
>gi|194702946|gb|ACF85557.1| unknown [Zea mays]
gi|413921126|gb|AFW61058.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 456
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/388 (62%), Positives = 277/388 (71%), Gaps = 26/388 (6%)
Query: 31 QQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAA------GVAVPPQQQGQPGEIRTL 84
Q PPP + Y +PP P A + PQAA A P E+RTL
Sbjct: 69 QAPPPPQAAYGQALPP-----PQAAYGQAPPPPQAAYYGAVPAPAAVAAAPVGPSEVRTL 123
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
WIGDLQYWMD+ Y+ CFA TGEV VK+IR+K TGQ++GYGFIEFISRA AERVLQT+N
Sbjct: 124 WIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVLQTYN 183
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
GT MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFRA YPS KGA
Sbjct: 184 GTMMPNVELPFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGA 241
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP 264
KVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NKK Q++ P
Sbjct: 242 KVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKVP 301
Query: 265 KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
A Q QSD+DPNNTT+FVG LD VT++ L+++F+ YG +VHVKIP GKRCGFVQ
Sbjct: 302 SA-----QGVQSDNDPNNTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQ 356
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQWNAGYYGYAQGYENY 382
+A+RS AEEAL +L GT +GGQN+RLSWGRSPSNKQ QP D NQW AG GY
Sbjct: 357 YANRSSAEEALVILQGTLVGGQNVRLSWGRSPSNKQVQPQQDSNQW-AGANAGYYGYGQG 415
Query: 383 GYAAAAP--QDPSMY---YGGYPGYGNY 405
A P QDP+MY G Y GY NY
Sbjct: 416 YEAYGYPQSQDPNMYNYGAGAYAGYPNY 443
>gi|359478387|ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/365 (61%), Positives = 271/365 (74%), Gaps = 18/365 (4%)
Query: 60 AAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
AA + A P Q E+RTLWIGDLQYW+DE YL++CFAHTGEV+++K+IRNK T
Sbjct: 19 AATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKIT 78
Query: 120 GQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFV 178
GQ EGYGF+EF+S A AER+LQ +NGT MP EQ FRLNWASFG GE+R D P+H+IFV
Sbjct: 79 GQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFV 138
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDLA DVTDY+LQETFRA+YPS +GAKVV D TGRTKGYGFV+F DE E+ RAMTEMNG
Sbjct: 139 GDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNG 198
Query: 239 VFCSTRPMRIGPATNKKTVSGQQQYPKASYQNS----------QVAQSDDDPNNTTVFVG 288
V+CSTRPMRI AT KKT QQQY A+ Q +D+D NNTT+FVG
Sbjct: 199 VYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVG 258
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
NLD VT+E L+++FSQ+G+LV+VKIPAG+ CGFVQF R+ AEEA++ + GT +G +
Sbjct: 259 NLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVV 318
Query: 349 RLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQ 407
R+SWGRSP+ KQA DP+QW++ YYGY QGY+ Y Y A QDPS+Y YG Y GY Y
Sbjct: 319 RISWGRSPTAKQA--DPSQWSSAYYGYGQGYDAYPYGAT--QDPSLYAYGAYAGYLQY-- 372
Query: 408 PQQPQ 412
PQQ +
Sbjct: 373 PQQAE 377
>gi|226504372|ref|NP_001141359.1| uncharacterized protein LOC100273450 [Zea mays]
gi|194704160|gb|ACF86164.1| unknown [Zea mays]
gi|413921127|gb|AFW61059.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/386 (62%), Positives = 276/386 (71%), Gaps = 25/386 (6%)
Query: 31 QQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAA------GVAVPPQQQGQPGEIRTL 84
Q PPP + Y +PP P A + PQAA A P E+RTL
Sbjct: 69 QAPPPPQAAYGQALPP-----PQAAYGQAPPPPQAAYYGAVPAPAAVAAAPVGPSEVRTL 123
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
WIGDLQYWMD+ Y+ CFA TGEV VK+IR+K TGQ++GYGFIEFISRA AERVLQT+N
Sbjct: 124 WIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVLQTYN 183
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
GT MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFRA YPS KGA
Sbjct: 184 GTMMPNVELPFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGA 241
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP 264
KVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NKK Q++ P
Sbjct: 242 KVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKVP 301
Query: 265 KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
A Q QSD+DPNNTT+FVG LD VT++ L+++F+ YG +VHVKIP GKRCGFVQ
Sbjct: 302 SA-----QGVQSDNDPNNTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQ 356
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGY 384
+A+RS AEEAL +L GT +GGQN+RLSWGRSPSNKQ Q D NQW AG GY
Sbjct: 357 YANRSSAEEALVILQGTLVGGQNVRLSWGRSPSNKQVQ-DSNQW-AGANAGYYGYGQGYE 414
Query: 385 AAAAP--QDPSMY---YGGYPGYGNY 405
A P QDP+MY G Y GY NY
Sbjct: 415 AYGYPQSQDPNMYNYGAGAYAGYPNY 440
>gi|357144721|ref|XP_003573391.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 435
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/333 (65%), Positives = 257/333 (77%), Gaps = 13/333 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE Y+ CFAHTGEV +VK+IR+KQTGQ++GYGF+EF +RAGAERV
Sbjct: 96 EVRTLWIGDLQYWMDENYVYGCFAHTGEVQSVKLIRDKQTGQLQGYGFVEFTTRAGAERV 155
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN E +RLNWAS AGEKRDD PD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 156 LQTYNGATMPNVEMPYRLNWAS--AGEKRDDGPDYTIFVGDLAADVTDYILQETFRVHYP 213
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVV D+LT R+KGYGFV+F D +EQ RAMTEMNG+ CS+RPMRIGPA NK+ VSG
Sbjct: 214 SVKGAKVVTDKLTMRSKGYGFVKFSDPTEQTRAMTEMNGMVCSSRPMRIGPAANKQKVSG 273
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
Q+ ++Q QSD DP+NTT+FVG LD VT++ L+++F+ YG++VHVKIP GKR
Sbjct: 274 AQE----KVPSAQGVQSDSDPSNTTIFVGGLDPNVTEDMLKQVFAPYGEVVHVKIPVGKR 329
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQWNA----GYY 373
CGFVQ+A RS +EEAL ML GT +GGQN+RLSWGRSPSNKQ Q D NQW Y
Sbjct: 330 CGFVQYASRSSSEEALLMLQGTVIGGQNVRLSWGRSPSNKQVQTPQDSNQWGGATANAGY 389
Query: 374 GYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNY 405
AA PQDP+MY YG Y GY NY
Sbjct: 390 YGYGQGYEAYGYAAQPQDPNMYGYGAYAGYPNY 422
>gi|224124344|ref|XP_002319308.1| predicted protein [Populus trichocarpa]
gi|222857684|gb|EEE95231.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/282 (73%), Positives = 239/282 (84%), Gaps = 3/282 (1%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
EI++LWIGDLQ WMDE Y+ + F+ TGEVV KVIRNKQTG EGYGFIEF+S A AER+
Sbjct: 65 EIKSLWIGDLQQWMDENYILSIFSTTGEVVQAKVIRNKQTGYPEGYGFIEFVSHAAAERI 124
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQT+NGTPMPN EQ FRLNWA+ GAGE+R DD PD+T+F+GDLAADV DY+LQETFR Y
Sbjct: 125 LQTYNGTPMPNSEQTFRLNWATLGAGERRQDDGPDYTVFIGDLAADVNDYLLQETFRNVY 184
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKVV DR+TGR+KGYGFVRF DE+EQ+RAM EMNG +CSTRPMRIGPA KK ++
Sbjct: 185 SSVKGAKVVTDRVTGRSKGYGFVRFADENEQMRAMVEMNGQYCSTRPMRIGPAATKKPLT 244
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
QQY KA+YQ+ Q Q + DPNNTT+FVG LD VTD+ LR +FS+YG+LVHVKIPAGK
Sbjct: 245 --QQYQKAAYQSPQGNQGESDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGK 302
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
RCGFVQFA+R+CAE+AL MLNGTQ+ GQNIRLSWGRSPSNKQ
Sbjct: 303 RCGFVQFANRTCAEQALSMLNGTQIAGQNIRLSWGRSPSNKQ 344
>gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525779|dbj|BAJ88936.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/337 (66%), Positives = 268/337 (79%), Gaps = 14/337 (4%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE Y+ +CFA+TGE +VK+IR+KQTGQ++GYGF+EF S A AERV
Sbjct: 89 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 148
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQTFNG MPN E +RLNWAS AGEKRDDTPD+TIFVGDLAADVTDYMLQETFR YP
Sbjct: 149 LQTFNGQMMPNVELAYRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYMLQETFRVHYP 206
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVV D++T R+KGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA N+KT
Sbjct: 207 SVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAANRKTTGV 266
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
Q++ P + N+Q AQSD+DPNNTT+FVG LD VT++ L+++F+ YG++VHVKIP GKR
Sbjct: 267 QERVPIPN-TNTQGAQSDNDPNNTTIFVGGLDPNVTEDALKQVFAPYGEVVHVKIPVGKR 325
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP-DPNQW---------N 369
CGFVQ+A+R AE+AL++L GT +GGQN+RLSWGRSPSNKQ QP + QW
Sbjct: 326 CGFVQYANRPSAEQALQLLQGTLVGGQNVRLSWGRSPSNKQTQPQEATQWGAGAAAGAAG 385
Query: 370 AGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNY 405
Y GY QGYE YG A PQDP+MY YG Y GY NY
Sbjct: 386 GYYAGYGQGYEAYGQGYAQPQDPNMYGYGAYAGYPNY 422
>gi|293337265|ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
gi|223947441|gb|ACN27804.1| unknown [Zea mays]
gi|223947469|gb|ACN27818.1| unknown [Zea mays]
gi|413933766|gb|AFW68317.1| hypothetical protein ZEAMMB73_975236, partial [Zea mays]
Length = 406
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/357 (63%), Positives = 268/357 (75%), Gaps = 8/357 (2%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAV 111
PPAMW AA E RTLWIGDLQYWMDE YL +CF+ GEV++V
Sbjct: 43 PPAMWGQPPPQAAAAPAPAGGGAGD---EARTLWIGDLQYWMDENYLYSCFSQAGEVISV 99
Query: 112 KVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DD 170
K+IRNKQTGQ EGYGFIEF + A AE+VLQ +NG MPN Q F+LNWA+ GAGEKR DD
Sbjct: 100 KIIRNKQTGQPEGYGFIEFSNHAVAEQVLQNYNGQMMPNVNQPFKLNWATSGAGEKRGDD 159
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
D+TIFVGDLA+DVTD++LQ+TF++RYPS KGAKVV DR TGR+KGYGFV+F D EQ
Sbjct: 160 GSDYTIFVGDLASDVTDFILQDTFKSRYPSVKGAKVVFDRTTGRSKGYGFVKFADSDEQT 219
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNL 290
RAMTEMNG +CS+R MR+GPA+NKK G Q A YQN+Q SD DPNNTTVFVG L
Sbjct: 220 RAMTEMNGQYCSSRAMRLGPASNKKNTGGPQP-SSAIYQNTQGTDSDSDPNNTTVFVGGL 278
Query: 291 DSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 350
D VTDE L++ FS YG+L++VKIP GKRCGFVQ+++R+ AEEA+R+LNG+QLGGQ+IRL
Sbjct: 279 DPSVTDELLKQTFSPYGELLYVKIPVGKRCGFVQYSNRASAEEAIRVLNGSQLGGQSIRL 338
Query: 351 SWGRSPSNKQAQPDPNQWNAGYYGYAQGYEN-YGYAAAAPQDPSMY-YGGYPGYGNY 405
SWGRSP+NKQ Q + +QW+ G Y + YGYA PQDP+MY Y YPGYGNY
Sbjct: 339 SWGRSPANKQPQQEQSQWSGGGYYGYPQGYDPYGYARP-PQDPAMYAYAAYPGYGNY 394
>gi|225435468|ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/372 (59%), Positives = 271/372 (72%), Gaps = 23/372 (6%)
Query: 60 AAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
AA + A P Q E+RTLWIGDLQYW+DE YL++CFAHTGEV+++K+IRNK T
Sbjct: 19 AATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKIT 78
Query: 120 GQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFV 178
GQ EGYGF+EF+S A AER+LQ +NGT MP EQ FRLNWASFG GE+R D P+H+IFV
Sbjct: 79 GQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFV 138
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDLA DVTDY+LQETFRA+YPS +GAKVV D TGRTKGYGFV+F DE E+ RAMTEMNG
Sbjct: 139 GDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNG 198
Query: 239 VFCSTRPMRIGPATNKKTVSGQQQYPKASYQNS----------QVAQSDDDPNNTTVFVG 288
V+CSTRPMRI AT KKT QQQY A+ Q +D+D NNTT+FVG
Sbjct: 199 VYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVG 258
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
NLD VT+E L+++FSQ+G+LV+VKIPAG+ CGFVQF R+ AEEA++ + GT +G +
Sbjct: 259 NLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVV 318
Query: 349 RLSWGRSPSNKQAQP-------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYP 400
R+SWGRSP+ KQ P DP+QW++ YYGY QGY+ Y Y A QDPS+Y YG Y
Sbjct: 319 RISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYGAT--QDPSLYAYGAYA 376
Query: 401 GYGNYQQPQQPQ 412
GY Y PQQ +
Sbjct: 377 GYLQY--PQQAE 386
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/370 (60%), Positives = 270/370 (72%), Gaps = 23/370 (6%)
Query: 60 AAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
AA + A P Q E+RTLWIGDLQYW+DE YL++CFAHTGEV+++K+IRNK T
Sbjct: 19 AATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKIT 78
Query: 120 GQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFV 178
GQ EGYGF+EF+S A AER+LQ +NGT MP EQ FRLNWASFG GE+R D P+H+IFV
Sbjct: 79 GQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFV 138
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDLA DVTDY+LQETFRA+YPS +GAKVV D TGRTKGYGFV+F DE E+ RAMTEMNG
Sbjct: 139 GDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNG 198
Query: 239 VFCSTRPMRIGPATNKKTVSGQQQYPKASYQNS----------QVAQSDDDPNNTTVFVG 288
V+CSTRPMRI AT KKT QQQY A+ Q +D+D NNTT+FVG
Sbjct: 199 VYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVG 258
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
NLD VT+E L+++FSQ+G+LV+VKIPAG+ CGFVQF R+ AEEA++ + GT +G +
Sbjct: 259 NLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVV 318
Query: 349 RLSWGRSPSNKQAQP-------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYP 400
R+SWGRSP+ KQ P DP+QW++ YYGY QGY+ Y Y A QDPS+Y YG Y
Sbjct: 319 RISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYGAT--QDPSLYAYGAYA 376
Query: 401 GYGNYQQPQQ 410
GY Y PQQ
Sbjct: 377 GYLQY--PQQ 384
>gi|357166074|ref|XP_003580589.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 426
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/333 (65%), Positives = 265/333 (79%), Gaps = 12/333 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDETY++ CFA TGE+ +VK+IR+KQTGQ++GYGF+EF S A AERV
Sbjct: 86 EVRTLWIGDLQYWMDETYIHGCFASTGELQSVKLIRDKQTGQLQGYGFVEFTSHAAAERV 145
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQ +NG MPN + +RLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 146 LQGYNGHAMPNVDLAYRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYILQETFRVHYP 203
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVV D++T R+KGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA N+KT
Sbjct: 204 SVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAANRKTTGV 263
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
Q++ P N+Q AQSD+DPNNTT+FVG LD VT++ L+++F+ YG+++HVKIP GKR
Sbjct: 264 QERVPNT---NTQGAQSDNDPNNTTIFVGGLDPNVTEDALKQVFAPYGEVIHVKIPVGKR 320
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQW----NAGYY 373
CGFVQF +R AE+AL+ML GT +GGQN+RLSWGRSPSNKQAQP + +QW AGYY
Sbjct: 321 CGFVQFVNRPSAEQALQMLQGTPIGGQNVRLSWGRSPSNKQAQPQQESSQWGANAGAGYY 380
Query: 374 GYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNY 405
G + A PQDP+MY YG Y GY NY
Sbjct: 381 GGYGQGYDAYGGYAQPQDPNMYGYGAYAGYPNY 413
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza sativa Japonica Group]
Length = 446
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/343 (64%), Positives = 257/343 (74%), Gaps = 33/343 (9%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQ+WM+E YL CF+ GE+++ K+IRNKQTGQ EGYGFIEF S A AE+V
Sbjct: 109 EVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQV 168
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR---------------DDTPDHTIFVGDLAAD 184
LQ +NG MPNG Q F+LNWA+ GAGEKR D
Sbjct: 169 LQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLAS--------------D 214
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
VTD +LQ+TF+A Y S KGAKVV DR TGR+KGYGFV+FGD EQ RAMTEMNG +CS+R
Sbjct: 215 VTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSR 274
Query: 245 PMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
PMRIGPA+NKK + GQQQ P A+YQN+Q SD DPNNTTVFVG LD VTDE L++ FS
Sbjct: 275 PMRIGPASNKKNIGGQQQ-PSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFS 333
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 364
YG+LV+VKIP GKRCGFVQ+++R+ AEEA+RMLNG+QLGGQ+IRLSWGRSP NKQ Q D
Sbjct: 334 PYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQD 393
Query: 365 PNQWNAGYYGY-AQGYENYGYAAAAPQDPSMY-YGGYPGYGNY 405
NQWNAGYYGY QGY+ YGY PQDP+MY Y YPGYGNY
Sbjct: 394 QNQWNAGYYGYPPQGYDPYGY-VRPPQDPAMYAYAAYPGYGNY 435
>gi|326495314|dbj|BAJ85753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/388 (60%), Positives = 274/388 (70%), Gaps = 47/388 (12%)
Query: 1 MMQPAPGAVPPPP------------PPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQP 48
M QP PG PP P PPM HQ APP Q QP +PPQ
Sbjct: 2 MPQPQPGVAPPHPASGAPPQWGAIPPPMLPHQLY----APPPLQMWSQP------LPPQQ 51
Query: 49 ----QAQPPAMWATQAAAPQAAGV---AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTC 101
QAQPP PQ A +VP Q P E RTLWIGDLQYWMDE Y+ C
Sbjct: 52 AAYGQAQPP---------PQTAYYGWPSVPTQAPAGPNEARTLWIGDLQYWMDENYVYNC 102
Query: 102 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161
FA TGEV +VK+IR+KQTGQ++GYGFIEF SRAGAERVLQTFNG MPN E +RLNWA+
Sbjct: 103 FASTGEVQSVKLIRDKQTGQLQGYGFIEFTSRAGAERVLQTFNGAMMPNVEMTYRLNWAT 162
Query: 162 FGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFV 221
AGEK DD D+TIFVGDLAADVTDY+LQETFRA+YPS KGAKVV D+LT R+KGYGFV
Sbjct: 163 --AGEKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKGYGFV 220
Query: 222 RFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG-QQQYPKASYQNSQVAQSDDDP 280
+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NK+ +G Q++ P A Q Q+D+DP
Sbjct: 221 KFGDPTEQTRAMTEMNGMICSSRPMRIGPAANKQKANGVQEKVPTA-----QGIQTDNDP 275
Query: 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 340
+N+T+FVG LD T++ L+++F+ YG++VHVKIP GKRCGFVQ+A RS AEEAL ML G
Sbjct: 276 SNSTIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASRSSAEEALLMLQG 335
Query: 341 TQLGGQNIRLSWGRSPSNKQAQPDPNQW 368
T + GQN+RLSWGRSPSNKQ Q D NQW
Sbjct: 336 TMIEGQNVRLSWGRSPSNKQVQ-DFNQW 362
>gi|449469386|ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/347 (62%), Positives = 264/347 (76%), Gaps = 21/347 (6%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE+YLN+CFAHTGEV+++K+IRNK TGQ EGYGF+EF+S A AER+
Sbjct: 18 EVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERI 77
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQT+NGT MP EQ FRLNWASFG GE+R D P+H+IFVGDLA DVTDY+LQETFRA+Y
Sbjct: 78 LQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQY 137
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS +GAKVV D TGR+KGYGFV+F DE+E+ RAM+EMNGV+CSTRPMRI AT KKT+
Sbjct: 138 PSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKTIG 197
Query: 259 GQQQ-------YPKASYQNSQ-VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
QQQ YP +Y S V +D D NNTT+FVGNLD +T+E L++ F Q+G++
Sbjct: 198 VQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIA 257
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA------QPD 364
+VKIPAGK CGFVQF R+ AEEA++ + G +G Q +R SWGR+P+ KQ Q D
Sbjct: 258 YVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLTTWGQQVD 317
Query: 365 PNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQ 410
PNQW+A YYGY Y+ YGY QDPS+Y YG Y GY +Y PQQ
Sbjct: 318 PNQWSA-YYGYGGTYDAYGYGVV--QDPSLYGYGAYSGYASY--PQQ 359
>gi|326513618|dbj|BAJ87828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/390 (60%), Positives = 274/390 (70%), Gaps = 48/390 (12%)
Query: 1 MMQPAPGAVPPPP------------PPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQP 48
M QP PG PP P PPM HQ APP Q QP +PPQ
Sbjct: 2 MPQPQPGVAPPHPASGAPPQWGAIPPPMLPHQLY----APPPLQMWSQP------LPPQQ 51
Query: 49 ----QAQPPAMWATQAAAPQAAGV---AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTC 101
QAQPP PQ A +VP Q P E RTLWIGDLQYWMDE Y+ C
Sbjct: 52 AAYGQAQPP---------PQTAYYGWPSVPTQAPAGPNEARTLWIGDLQYWMDENYVYNC 102
Query: 102 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161
FA TGEV +VK+IR+KQTGQ++GYGFIEF SRAGAERVLQTFNG MPN E +RLNWA+
Sbjct: 103 FASTGEVQSVKLIRDKQTGQLQGYGFIEFTSRAGAERVLQTFNGAMMPNVEMAYRLNWAT 162
Query: 162 FGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFV 221
AGEK DD D+TIFVGDLAADVTDY+LQETFRA+YPS KGAKVV D+LT R+KGYGFV
Sbjct: 163 --AGEKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKGYGFV 220
Query: 222 RFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG-QQQYPKASYQNSQVAQSDDDP 280
+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NK+ +G Q++ P A Q Q+D+DP
Sbjct: 221 KFGDPTEQTRAMTEMNGMICSSRPMRIGPAANKQKANGVQEKVPTA-----QGIQTDNDP 275
Query: 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 340
+N+T+FVG LD T++ L+++F+ YG++VHVKIP GKRCGFVQ+A RS AEEAL ML G
Sbjct: 276 SNSTIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASRSSAEEALLMLQG 335
Query: 341 TQLGGQNIRLSWGRSPSNKQAQP--DPNQW 368
T + GQN+RLSWGRSPSNKQ Q D NQW
Sbjct: 336 TMIEGQNVRLSWGRSPSNKQVQSQQDFNQW 365
>gi|125549823|gb|EAY95645.1| hypothetical protein OsI_17510 [Oryza sativa Indica Group]
Length = 426
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/332 (64%), Positives = 259/332 (78%), Gaps = 13/332 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E++TLWIGDLQ WMDE+Y+ CFA TGEV +VK+IR+KQ+GQ++GYGF+EF SRA A+R+
Sbjct: 89 EVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRI 148
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 149 LQTYNGQMMPNVEMVFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYP 206
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVV D++T R+KGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NKKT
Sbjct: 207 SVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGV 266
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
Q++ P N+Q AQS++DPNNTT+FVG LD VT++ L+++F+ YG++VHVKIP GKR
Sbjct: 267 QERVP-----NAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKR 321
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQW-----NAGYYG 374
CGFVQ+ +R AE+AL +L GT +GGQN+RLSWGRS SNKQ Q D NQW GYYG
Sbjct: 322 CGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYYG 381
Query: 375 YAQGYENYGYAAAAPQDPSMY-YGGYPGYGNY 405
A PQDP+MY YG Y GY NY
Sbjct: 382 GYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNY 413
>gi|115460682|ref|NP_001053941.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|113565512|dbj|BAF15855.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|215767966|dbj|BAH00195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 425
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/332 (64%), Positives = 259/332 (78%), Gaps = 13/332 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E++TLWIGDLQ WMDE+Y+ CFA TGEV +VK+IR+KQ+GQ++GYGF+EF SRA A+R+
Sbjct: 88 EVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRI 147
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 148 LQTYNGQMMPNVEMVFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYP 205
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVV D++T R+KGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NKKT
Sbjct: 206 SVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGV 265
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
Q++ P N+Q AQS++DPNNTT+FVG LD VT++ L+++F+ YG++VHVKIP GKR
Sbjct: 266 QERVP-----NAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKR 320
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQW-----NAGYYG 374
CGFVQ+ +R AE+AL +L GT +GGQN+RLSWGRS SNKQ Q D NQW GYYG
Sbjct: 321 CGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYYG 380
Query: 375 YAQGYENYGYAAAAPQDPSMY-YGGYPGYGNY 405
A PQDP+MY YG Y GY NY
Sbjct: 381 GYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNY 412
>gi|39545835|emb|CAE04743.3| OSJNBb0060E08.6 [Oryza sativa Japonica Group]
gi|116309791|emb|CAH66831.1| OSIGBa0148A10.8 [Oryza sativa Indica Group]
Length = 414
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/332 (64%), Positives = 259/332 (78%), Gaps = 13/332 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E++TLWIGDLQ WMDE+Y+ CFA TGEV +VK+IR+KQ+GQ++GYGF+EF SRA A+R+
Sbjct: 77 EVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRI 136
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 137 LQTYNGQMMPNVEMVFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYP 194
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVV D++T R+KGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NKKT
Sbjct: 195 SVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGV 254
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
Q++ P N+Q AQS++DPNNTT+FVG LD VT++ L+++F+ YG++VHVKIP GKR
Sbjct: 255 QERVP-----NAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKR 309
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQW-----NAGYYG 374
CGFVQ+ +R AE+AL +L GT +GGQN+RLSWGRS SNKQ Q D NQW GYYG
Sbjct: 310 CGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYYG 369
Query: 375 YAQGYENYGYAAAAPQDPSMY-YGGYPGYGNY 405
A PQDP+MY YG Y GY NY
Sbjct: 370 GYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNY 401
>gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 412
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/362 (61%), Positives = 265/362 (73%), Gaps = 23/362 (6%)
Query: 65 AAGVAVPPQQQGQPG---EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQ 121
AA A P QP E+RTLWIGDLQYW+DE YL++CFAHTGEV+++K+IRNK TGQ
Sbjct: 2 AAPTATNPGGYHQPATLEEVRTLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITGQ 61
Query: 122 IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGD 180
EGYGF+EF+S AER+LQT+NGT MP EQ FRLNWASFG GE+R D P+H+IFVGD
Sbjct: 62 PEGYGFVEFVSHVAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGD 121
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L+ DVTDY+LQETFRA YPS +GAKVV D TGR+KGYGFV+FGDE+E+ RAMTEMNGVF
Sbjct: 122 LSPDVTDYLLQETFRANYPSVRGAKVVTDPNTGRSKGYGFVKFGDENERNRAMTEMNGVF 181
Query: 241 CSTRPMRIGPATNKKTVSGQQQY--PKASY------QNSQVAQSDDDPNNTTVFVGNLDS 292
CSTRPMRI AT KKT + QQQY KA Y QV +D+D NTT+FVGNLD
Sbjct: 182 CSTRPMRISAATPKKTAAYQQQYATAKAIYPLPAYTAPVQVVPADNDITNTTIFVGNLDP 241
Query: 293 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352
VT+E LR +F Q+G++V+VKIP G+ CGFVQFA R+ AEEA++ + G +G Q +R+SW
Sbjct: 242 NVTEEELRPIFLQFGEIVYVKIPVGRGCGFVQFATRASAEEAIQRMQGHVIGQQPVRISW 301
Query: 353 GRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQP 411
GR + D QW+A YYGY QGY+ Y Y A QDPS+Y YG Y GY PQ P
Sbjct: 302 GRKQARSTLILD--QWSA-YYGYGQGYDAYAYGAT--QDPSLYAYGAYAGY-----PQYP 351
Query: 412 QQ 413
QQ
Sbjct: 352 QQ 353
>gi|242074396|ref|XP_002447134.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
gi|241938317|gb|EES11462.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
Length = 440
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/341 (65%), Positives = 258/341 (75%), Gaps = 24/341 (7%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE+Y+ CF TGEV VK+IR+K +GQ++GYGF+EF SRA AERV
Sbjct: 90 EVRTLWIGDLQYWMDESYVLGCFLSTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERV 149
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 150 LQTYNGQMMPNVELTFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYP 207
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA ++K G
Sbjct: 208 SVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNTGG 267
Query: 260 --QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG 317
Q++ P NSQ AQS++DPNNTT+FVG LD VT++ L+++FS YG++VHVKIP G
Sbjct: 268 VVQERVP-----NSQGAQSENDPNNTTIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVG 322
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQWNAGYYGY 375
KRCGFVQF R AE+AL ML G +G QN+RLSWGRS SNKQAQP + NQW A
Sbjct: 323 KRCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQAQPQQESNQWGAAAAAG 382
Query: 376 AQGYENY----------GYAAAAPQDPSMY-YGGYPGYGNY 405
A GY GY A PQDP+MY YG Y GY NY
Sbjct: 383 AGGYYGGYGQGYEAYGSGY--AQPQDPNMYGYGAYAGYPNY 421
>gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/356 (60%), Positives = 261/356 (73%), Gaps = 20/356 (5%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q Q + +T+WIGDLQ WMDE+YL++CF+ GEV++VK+IRNKQTGQ E YGF+EF
Sbjct: 127 PTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEF 186
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYM 189
+ A AE+VLQ++NGT MPN EQ FRLNWA F GEKR +T D +IFVGDLA+DVTD M
Sbjct: 187 NTHAAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTM 246
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L++TF +RYPS KGAKVV+D TG +KGYGFVRFGDESE+ RAMTEMNGV+CS+R MRIG
Sbjct: 247 LRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIG 306
Query: 250 PATNKKTVSGQQQYP------KASYQNSQVA----QSDDDPNNTTVFVGNLDSIVTDEHL 299
AT KK S QQQY Y ++ A QSD D +NTT+FVG LDS VTDE L
Sbjct: 307 VATPKKP-SAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEEL 365
Query: 300 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
R+ F+Q+G++V VKIPAGK CGFVQF+DRS A+EA++ L+G +G Q +RLSWGRSP+NK
Sbjct: 366 RQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANK 425
Query: 360 QAQPDP-NQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYP------GYGNYQQP 408
Q + D +QWN GY G Q Y YGY A+ QD MY G GYGN+QQP
Sbjct: 426 QMRADSGSQWNGGYNG-RQNYGGYGYGASQNQDSGMYATGAAYGASSNGYGNHQQP 480
>gi|449513289|ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
RBP47B'-like [Cucumis sativus]
Length = 427
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/352 (59%), Positives = 261/352 (74%), Gaps = 26/352 (7%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE+YLN+CFAHTGEV+++K+IRNK TGQ EGYGF+EF+S A AER+
Sbjct: 18 EVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERI 77
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQT+NGT MP EQ FRLNWASFG GE+R D P+H+IFVGDLA DVTDY+LQETFRA+Y
Sbjct: 78 LQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQY 137
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---- 254
PS +GAKVV D TGR+KGYGFV+F DE+E+ RAM+EMNG +CSTRPMRI AT K
Sbjct: 138 PSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGXYCSTRPMRISAATPKKPLV 197
Query: 255 --------KTVSGQQQYPKASYQNSQ-VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQ 305
K ++ + YP +Y S V +D D NNTT+FVGNLD +T+E L++ F Q
Sbjct: 198 FSSNTVXVKVMNNESMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQ 257
Query: 306 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA---- 361
+G++ +VKIPAGK CGFVQF R+ AEEA++ + G +G Q +R SWGR+P+ KQ
Sbjct: 258 FGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLTTW 317
Query: 362 --QPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQ 410
Q DPNQW+A YYGY Y+ YGY QDPS+Y YG Y GY +Y PQQ
Sbjct: 318 GQQVDPNQWSA-YYGYGGTYDAYGYGVV--QDPSLYGYGAYSGYASY--PQQ 364
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
gi|297310199|gb|EFH40623.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
Length = 398
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/322 (65%), Positives = 247/322 (76%), Gaps = 15/322 (4%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+++LWIGDLQ WMDE Y+ + F +GE + KVIRNK TGQ EGYGFIEFI+ + AERV
Sbjct: 62 EVKSLWIGDLQQWMDENYIMSVFNQSGEAQSAKVIRNKLTGQSEGYGFIEFINHSVAERV 121
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT--PDHTIFVGDLAADVTDYMLQETFRAR 197
LQT+NG MP+ EQ FRLNWA GAGEKR T PDHTIFVGDLA +VTDYML +TF+
Sbjct: 122 LQTYNGAQMPSTEQTFRLNWAQAGAGEKRHQTEGPDHTIFVGDLAPEVTDYMLSDTFKNV 181
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y S KGAKVV+DR TGR+KGYGFVRF DE+EQ+RAMTEMNG +CSTRPMRIGPA NK +
Sbjct: 182 YGSVKGAKVVVDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNAL 241
Query: 258 SGQQQYPKASYQNSQVAQS-DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 316
Q A YQN+Q + D DPNNTT+FVG LD+ VTD+ L+ +F Q+G+L+HVKIP
Sbjct: 242 PMQ----PAMYQNTQGGNAGDSDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPP 297
Query: 317 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN-AGYYGY 375
GKRCGFVQ+A+R+ AE AL +LNGTQLGGQ+IRLSWGRSP+ QPD QWN GYYGY
Sbjct: 298 GKRCGFVQYANRATAEHALSVLNGTQLGGQSIRLSWGRSPNK---QPDQAQWNGGGYYGY 354
Query: 376 ----AQGYENYGYAAAAPQDPS 393
GYE YGYAA QDP+
Sbjct: 355 PPQPQGGYEPYGYAAQPNQDPN 376
>gi|224286528|gb|ACN40970.1| unknown [Picea sitchensis]
Length = 430
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/337 (62%), Positives = 256/337 (75%), Gaps = 18/337 (5%)
Query: 74 QQGQP---GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
QQ QP E++TLW+GDLQ+WMDE YL+TCF+HTGE+V+ K+IRNK TGQ EGYGF+EF
Sbjct: 81 QQHQPQSSDEVKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEF 140
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYM 189
I+R AE+++QT+NGT MPN EQ FR+NWA+F GE+R D PD +IFVGDL +DV+D +
Sbjct: 141 ITRTAAEKIMQTYNGTLMPNTEQVFRMNWATFSMGERRLDGGPDFSIFVGDLDSDVSDLV 200
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
LQETF++RY S K AKVV+D TGR+KGYGFVRFG+ESE+ RAMTEMNGV+CSTRPMRI
Sbjct: 201 LQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMTEMNGVYCSTRPMRIS 260
Query: 250 PATNKKTVSGQQQYPKASYQNSQVAQ---SDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 306
AT +K+ Q QY + AQ SD+D NNTT+FVG LD TDE LR++F QY
Sbjct: 261 AATPRKSAGVQHQYSGRAGNGGSHAQGFPSDNDLNNTTIFVGRLDPNATDEDLRQVFGQY 320
Query: 307 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK------- 359
G+LV VKIP GK CGFVQF +R+ AEEAL+ L+GT + Q +RLSWGRSP+NK
Sbjct: 321 GELVSVKIPVGKGCGFVQFGNRASAEEALQRLHGTVIRQQTVRLSWGRSPANKQQPQPQG 380
Query: 360 -QAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY 395
Q Q DPNQWN YYG QGYE+YGY A PQDP+MY
Sbjct: 381 QQPQSDPNQWNGAYYG--QGYESYGY-APPPQDPAMY 414
>gi|226491568|ref|NP_001142233.1| uncharacterized protein LOC100274401 [Zea mays]
gi|194707728|gb|ACF87948.1| unknown [Zea mays]
gi|414886903|tpg|DAA62917.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 465
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/337 (63%), Positives = 253/337 (75%), Gaps = 9/337 (2%)
Query: 79 GEIRTLWIGDLQYWMDETYL--NTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
GE+RTLWIGDLQ+WMDE YL N A ++ +VK+IRNKQTG EGYGFIEF SRA A
Sbjct: 111 GEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFIEFYSRAAA 170
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFR 195
E L FNG MPN E F+LNWAS G+KR D+ D TIFVGDLA DVTD ML++ FR
Sbjct: 171 EHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTDSMLEDVFR 230
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
A+YPS +GA VV+DR+TG KG+GFVRFGD +EQ RAMTEMNG+ STR MRIG A NKK
Sbjct: 231 AKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMRIGAAANKK 290
Query: 256 TVSGQQQYP-KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
QQ Y +YQ+S+ S++DPNNTTVFVG LDS V +E+LR++F+ YG++ +VKI
Sbjct: 291 NRDAQQTYATDGAYQSSKGNSSENDPNNTTVFVGGLDSNVNEEYLRQIFTPYGEISYVKI 350
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA-QPDP-NQWNA-G 371
P GK CGFVQF RSCAEEA+RMLNG+Q+GGQ +RLSWGRSP N+QA Q D NQ+N
Sbjct: 351 PVGKHCGFVQFTSRSCAEEAIRMLNGSQVGGQKVRLSWGRSPQNRQASQHDANNQYNGNS 410
Query: 372 YYGYAQ-GYENYGYAAAAPQDPSM-YYGGYPGYGNYQ 406
YYGY Q GYE YGY A++ QDPSM Y GY G GNY+
Sbjct: 411 YYGYQQPGYEGYGYGASSAQDPSMQNYYGYSGCGNYE 447
>gi|414886904|tpg|DAA62918.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 484
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/337 (63%), Positives = 253/337 (75%), Gaps = 9/337 (2%)
Query: 79 GEIRTLWIGDLQYWMDETYL--NTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
GE+RTLWIGDLQ+WMDE YL N A ++ +VK+IRNKQTG EGYGFIEF SRA A
Sbjct: 111 GEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFIEFYSRAAA 170
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFR 195
E L FNG MPN E F+LNWAS G+KR D+ D TIFVGDLA DVTD ML++ FR
Sbjct: 171 EHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTDSMLEDVFR 230
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
A+YPS +GA VV+DR+TG KG+GFVRFGD +EQ RAMTEMNG+ STR MRIG A NKK
Sbjct: 231 AKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMRIGAAANKK 290
Query: 256 TVSGQQQYP-KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
QQ Y +YQ+S+ S++DPNNTTVFVG LDS V +E+LR++F+ YG++ +VKI
Sbjct: 291 NRDAQQTYATDGAYQSSKGNSSENDPNNTTVFVGGLDSNVNEEYLRQIFTPYGEISYVKI 350
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA-QPDP-NQWNA-G 371
P GK CGFVQF RSCAEEA+RMLNG+Q+GGQ +RLSWGRSP N+QA Q D NQ+N
Sbjct: 351 PVGKHCGFVQFTSRSCAEEAIRMLNGSQVGGQKVRLSWGRSPQNRQASQHDANNQYNGNS 410
Query: 372 YYGYAQ-GYENYGYAAAAPQDPSM-YYGGYPGYGNYQ 406
YYGY Q GYE YGY A++ QDPSM Y GY G GNY+
Sbjct: 411 YYGYQQPGYEGYGYGASSAQDPSMQNYYGYSGCGNYE 447
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName: Full=Polyadenylate-binding protein RBP45C;
Short=Poly(A)-binding protein RBP45C; AltName:
Full=RNA-binding protein 45C; Short=AtRBP45C
gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA binding protein [Arabidopsis thaliana]
gi|15450814|gb|AAK96678.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17104569|gb|AAL34173.1| putative DNA binding protein [Arabidopsis thaliana]
gi|20259888|gb|AAM13291.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332659882|gb|AEE85282.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 415
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/319 (64%), Positives = 239/319 (74%), Gaps = 10/319 (3%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQ-----GQPGEIRTLWIGDLQYWMDETYLNTCFAHTG 106
PPA W Q+A G GEIR+LWIGDLQ WMDE YL F TG
Sbjct: 45 PPAGWNQQSAPSSGQPQQQQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTG 104
Query: 107 EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGE 166
E A KVIRNKQ G EGYGFIEF++ A AER LQT+NG PMP+ EQ FRLNWA GAGE
Sbjct: 105 EATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGE 164
Query: 167 KRD-DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
+R + P+HT+FVGDLA DVTD+ML ETF+A Y S KGAKVV DR TGR+KGYGFVRF D
Sbjct: 165 RRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFAD 224
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTV 285
ESEQ+RAMTEMNG +CS+RPMR GPA NKK ++ Q ASYQN+Q + DP NTT+
Sbjct: 225 ESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQ----PASYQNTQGNSGESDPTNTTI 280
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
FVG +D VT++ L+ +F Q+G+LVHVKIPAGKRCGFVQ+A+R+CAE+AL +LNGTQLGG
Sbjct: 281 FVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGG 340
Query: 346 QNIRLSWGRSPSNKQAQPD 364
Q+IRLSWGRSPSNKQ QPD
Sbjct: 341 QSIRLSWGRSPSNKQTQPD 359
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/345 (61%), Positives = 255/345 (73%), Gaps = 20/345 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+WIGDLQ WMDE YL+TCFA GEV++VKVIRNKQTGQ E YGFIEF + AE+VLQ
Sbjct: 79 RTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQ 138
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDT-------PDHTIFVGDLAADVTDYMLQETF 194
++NGT MPN EQ FRLNW++F GEKR D D +IFVGDLA+DVTD ML++TF
Sbjct: 139 SYNGTMMPNAEQPFRLNWSAFSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTMLRDTF 198
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+RYPS KGAKVVID TGR+KGYGFVRF DESE+ RAMTEMNG++CS+R MRIG AT K
Sbjct: 199 SSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPK 258
Query: 255 KTVSGQQQYPKASYQN----SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
K + QQ + + + +Q +Q+D D +NTTVFVG LDS VTDE LR+ FSQ+G +V
Sbjct: 259 KPSAMQQYSSQGGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVV 318
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWN 369
VKIPAGK CGFVQF++RS AE+A+ LNGT +G Q +RLSWGR+P+NKQ + D +QWN
Sbjct: 319 SVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGTQTVRLSWGRNPANKQFRTDSGSQWN 378
Query: 370 AGYYGYAQGYENYGYAAAAPQDPSMYYGGYP------GYGNYQQP 408
GYYG Q Y YGY A+ QD SMY G GYGN++Q
Sbjct: 379 GGYYG-RQNYGGYGYGASQSQD-SMYGAGAAHGASSNGYGNHEQS 421
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/350 (60%), Positives = 256/350 (73%), Gaps = 25/350 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+WIGDLQ WMDE YL+TCFA GEV++VKVIRNKQTGQ E YGFIEF + AE+VLQ
Sbjct: 79 RTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQ 138
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDT-------PDHTIFVGDLAADVTDYMLQETF 194
++NGT MPN EQ FRLNW++F +GEKR D D +IFVGDLA+DVTD ML++TF
Sbjct: 139 SYNGTMMPNAEQPFRLNWSAFSSGEKRADVGAGAGSGSDLSIFVGDLASDVTDTMLRDTF 198
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+RYPS KGAKVVID TGR+KGYGFVRF DESE+ RAMTEMNG++CS+R MRIG AT K
Sbjct: 199 SSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPK 258
Query: 255 KTVSGQQQYPKASY---------QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQ 305
K QQ +P+A +Q +Q+D D +NTTVFVG LDS VTDE LR+ FSQ
Sbjct: 259 KPSPMQQYFPQAVILAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSEVTDEELRQSFSQ 318
Query: 306 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP 365
+G +V VKIPAGK CGFVQF++RS AE+A+ LNGT +G Q +RLSWGR+P+NKQ + D
Sbjct: 319 FGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGAQTVRLSWGRNPANKQFRTDS 378
Query: 366 -NQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYP------GYGNYQQP 408
+QWN GYYG Q Y YGY A+ QD SMY G GYGN++Q
Sbjct: 379 GSQWNGGYYG-RQNYGGYGYGASQSQD-SMYGAGAAHGASSNGYGNHEQS 426
>gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
gi|297313365|gb|EFH43788.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/320 (63%), Positives = 242/320 (75%), Gaps = 11/320 (3%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQ------GQPGEIRTLWIGDLQYWMDETYLNTCFAHT 105
PPA W Q+A G GEIR+LWIGDLQ WM+E YL F+ T
Sbjct: 45 PPAGWNQQSAPSPGQPQQQQYGGGGGSQNPGSAGEIRSLWIGDLQPWMEENYLMNIFSLT 104
Query: 106 GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAG 165
G+ + KVIRNKQ+G EGYGFIEF++ A AER+LQ +NGT MP+ +Q FRLNWA GAG
Sbjct: 105 GDATSAKVIRNKQSGYSEGYGFIEFVNHATAERILQAYNGTTMPSSDQAFRLNWAQLGAG 164
Query: 166 EKRD-DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
E+R + P+HT+FVGDLA DVTD+ML ETF+A Y S KGAKVV DR TGR+KGYGFVRFG
Sbjct: 165 ERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVTDRTTGRSKGYGFVRFG 224
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTT 284
DESEQ+RAMTEMNG +CS+RPMR GPA NKK ++ Q ASYQN+Q Q + DP NTT
Sbjct: 225 DESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQ----PASYQNTQGNQGESDPTNTT 280
Query: 285 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 344
+FVG LD V ++ L+ +F Q+G+LVHVKIPAGKRCGFVQ+A+R+CAE+AL +LNGTQLG
Sbjct: 281 IFVGALDQSVIEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSLLNGTQLG 340
Query: 345 GQNIRLSWGRSPSNKQAQPD 364
GQ+IRLSWGRSPSNKQ QPD
Sbjct: 341 GQSIRLSWGRSPSNKQTQPD 360
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/331 (64%), Positives = 254/331 (76%), Gaps = 13/331 (3%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
+ Q G ++++LWIGDLQ WMDE Y+ + FA +GE + KVIRNK TGQ EGYGFI
Sbjct: 47 GIGSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFI 106
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT--PDHTIFVGDLAADVT 186
EF+S + AERVLQT+NG PMP+ EQ FRLNWA GAGEKR T PDHTIFVGDLA +VT
Sbjct: 107 EFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVT 166
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
DYML +TF+ Y S KGAKVV+DR TGR+KGYGFVRF DE+EQ+RAMTEMNG +CSTRPM
Sbjct: 167 DYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPM 226
Query: 247 RIGPATNKKTVSGQQQYPKASYQNSQVAQS-DDDPNNTTVFVGNLDSIVTDEHLRELFSQ 305
RIGPA NK + Q A YQN+Q A + D+DPNNTT+FVG LD+ VTD+ L+ +F Q
Sbjct: 227 RIGPAANKNALPMQ----PAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQ 282
Query: 306 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP 365
+G+L+HVKIP GKRCGFVQ+A+++ AE AL +LNGTQLGGQ+IRLSWGRSP NKQ+ D
Sbjct: 283 FGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP-NKQS--DQ 339
Query: 366 NQWN-AGYYGY-AQGYENYGYAAAAP-QDPS 393
QWN GYYGY Q YGYAA P QDP+
Sbjct: 340 AQWNGGGYYGYPPQPQGGYGYAAQPPTQDPN 370
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/331 (64%), Positives = 254/331 (76%), Gaps = 13/331 (3%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
+ Q G ++++LWIGDLQ WMDE Y+ + FA +GE + KVIRNK TGQ EGYGFI
Sbjct: 47 GIGSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFI 106
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT--PDHTIFVGDLAADVT 186
EF+S + AERVLQT+NG PMP+ EQ FRLNWA GAGEKR T PDHTIFVGDLA +VT
Sbjct: 107 EFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVT 166
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
DYML +TF+ Y S KGAKVV+DR TGR+KGYGFVRF DE+EQ+RAMTEMNG +CSTRPM
Sbjct: 167 DYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPM 226
Query: 247 RIGPATNKKTVSGQQQYPKASYQNSQVAQS-DDDPNNTTVFVGNLDSIVTDEHLRELFSQ 305
RIGPA NK + Q A YQN+Q A + D+DPNNTT+FVG LD+ VTD+ L+ +F Q
Sbjct: 227 RIGPAANKNALPMQ----PAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQ 282
Query: 306 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP 365
+G+L+HVKIP GKRCGFVQ+A+++ AE AL +LNGTQLGGQ+IRLSWGRSP NKQ+ D
Sbjct: 283 FGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP-NKQS--DQ 339
Query: 366 NQWN-AGYYGY-AQGYENYGYAAAAP-QDPS 393
QWN GYYGY Q YGYAA P QDP+
Sbjct: 340 AQWNGGGYYGYPPQPQGGYGYAAQPPTQDPN 370
>gi|212722596|ref|NP_001131852.1| uncharacterized protein LOC100193230 [Zea mays]
gi|194692726|gb|ACF80447.1| unknown [Zea mays]
gi|413919585|gb|AFW59517.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 434
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/341 (63%), Positives = 256/341 (75%), Gaps = 24/341 (7%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMD+ Y+ CF++TGEV VK+IR+K +GQ++GYGF+EF SRA AERV
Sbjct: 84 EVRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERV 143
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN + FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 144 LQTYNGQMMPNVDLTFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYP 201
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA ++K G
Sbjct: 202 SVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNAGG 261
Query: 260 --QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG 317
Q++ P NSQ AQS++DPNNTT+FVG LD VT++ L++ FS YG+++HVKIP G
Sbjct: 262 VVQERVP-----NSQGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVG 316
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQWNAG---- 371
KRCGFVQF R AE+AL ML G +G QN+RLSWGRS SNKQ QP + QW AG
Sbjct: 317 KRCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQTQPQQESMQWGAGAPAG 376
Query: 372 ------YYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNY 405
YG GY A PQDP+MY YG Y GY NY
Sbjct: 377 VGDYYGGYGQGYEAYGSGY--AQPQDPNMYGYGAYVGYPNY 415
>gi|224284226|gb|ACN39849.1| unknown [Picea sitchensis]
Length = 429
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/336 (62%), Positives = 254/336 (75%), Gaps = 17/336 (5%)
Query: 74 QQGQP---GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
QQ QP E++TLW+GDLQ+WMDE YL+TCF+HTGE+V+ K+IRNK TGQ EGYGF+EF
Sbjct: 81 QQHQPQSSDEVKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEF 140
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYM 189
I+R AE+++QT+NGT MPN EQ FR+NWA+F GE+R D PD +IFVGDL +DV+D +
Sbjct: 141 ITRTAAEKIMQTYNGTLMPNTEQVFRMNWATFSMGERRLDGGPDFSIFVGDLDSDVSDLV 200
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
LQETF++RY S K AKVV+D TGR+KGYGFVRFG+ESE+ RAMTEMNGV+CSTRPMRI
Sbjct: 201 LQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMTEMNGVYCSTRPMRIS 260
Query: 250 PATNKKTVSGQQQYPKASYQNSQVAQ--SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 307
AT +K+ Q QY S SD+D NNTT+FVG LD TDE LR++F QYG
Sbjct: 261 AATPRKSAGVQHQYSGRGNGGSHAQGFPSDNDLNNTTIFVGRLDPNATDEDLRQVFGQYG 320
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK-------- 359
+LV VKIP GK CGFVQF +R+ AEEAL+ L+GT + Q +RLSWGRSP+NK
Sbjct: 321 ELVSVKIPVGKGCGFVQFGNRASAEEALQRLHGTVIRQQTVRLSWGRSPANKQQPQPQGQ 380
Query: 360 QAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY 395
Q Q DPNQWN YYG QGYE+YGY A PQDP+MY
Sbjct: 381 QPQSDPNQWNGAYYG--QGYESYGY-APPPQDPAMY 413
>gi|413919584|gb|AFW59516.1| hypothetical protein ZEAMMB73_768040, partial [Zea mays]
Length = 428
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/341 (63%), Positives = 256/341 (75%), Gaps = 24/341 (7%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMD+ Y+ CF++TGEV VK+IR+K +GQ++GYGF+EF SRA AERV
Sbjct: 84 EVRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERV 143
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN + FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 144 LQTYNGQMMPNVDLTFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYP 201
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA ++K G
Sbjct: 202 SVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNAGG 261
Query: 260 --QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG 317
Q++ P NSQ AQS++DPNNTT+FVG LD VT++ L++ FS YG+++HVKIP G
Sbjct: 262 VVQERVP-----NSQGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVG 316
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQWNAG---- 371
KRCGFVQF R AE+AL ML G +G QN+RLSWGRS SNKQ QP + QW AG
Sbjct: 317 KRCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQTQPQQESMQWGAGAPAG 376
Query: 372 ------YYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNY 405
YG GY A PQDP+MY YG Y GY NY
Sbjct: 377 VGDYYGGYGQGYEAYGSGY--AQPQDPNMYGYGAYVGYPNY 415
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
gi|7269553|emb|CAB79555.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/319 (64%), Positives = 239/319 (74%), Gaps = 10/319 (3%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQ-----GQPGEIRTLWIGDLQYWMDETYLNTCFAHTG 106
PPA W Q+A G GEIR+LWIGDLQ WMDE YL F TG
Sbjct: 45 PPAGWNQQSAPSSGQPQQQQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTG 104
Query: 107 EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGE 166
E A KVIRNKQ G EGYGFIEF++ A AER LQT+NG PMP+ EQ FRLNWA GAGE
Sbjct: 105 EATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGE 164
Query: 167 KRD-DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
+R + P+HT+FVGDLA DVTD+ML ETF+A Y S KGAKVV DR TGR+KGYGFVRF D
Sbjct: 165 RRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFAD 224
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTV 285
ESEQ+RAMTEMNG +CS+RPMR GPA NKK ++ Q ASYQN+Q + DP NTT+
Sbjct: 225 ESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQ----PASYQNTQGNSGESDPTNTTI 280
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
FVG +D VT++ L+ +F Q+G+LVHVKIPAGKRCGFVQ+A+R+CAE+AL +LNGTQLGG
Sbjct: 281 FVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGG 340
Query: 346 QNIRLSWGRSPSNKQAQPD 364
Q+IRLSWGRSPSNKQ QPD
Sbjct: 341 QSIRLSWGRSPSNKQTQPD 359
>gi|449446975|ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449498692|ref|XP_004160607.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/382 (55%), Positives = 269/382 (70%), Gaps = 18/382 (4%)
Query: 38 SPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQ--QGQPGEIRTLWIGDLQYWMDE 95
+P M PP P PP + + P Q +G E +T+W+GDL +WMDE
Sbjct: 43 TPQHYMAPPLP---PPY--MHYHHQYHHHHLPIQPSQPLKGSGSENKTIWVGDLHHWMDE 97
Query: 96 TYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNF 155
+YL++CF+ GE+ ++KVIRNKQTG EGYGF+EF+S AE+VLQ ++G MP+ EQ F
Sbjct: 98 SYLHSCFSSVGEISSMKVIRNKQTGLSEGYGFVEFLSHTTAEKVLQNYSGMFMPSTEQTF 157
Query: 156 RLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGR 214
RLNWA+F G+KR D+ PD +IFVGDLAADVTD +L ETF +++PS K AKVVID TGR
Sbjct: 158 RLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGR 217
Query: 215 TKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPK--ASYQN-- 270
+KGYGFVRFGD++E+ +AMTEMNG++CS+RPMRIG AT +K+ QQQ+ Y
Sbjct: 218 SKGYGFVRFGDDNERSQAMTEMNGIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNG 277
Query: 271 --SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADR 328
SQ QS+ D NTT+FVG LD VTDE LR+ FSQYG++V VKIP GK CGFVQFA+R
Sbjct: 278 YFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANR 337
Query: 329 SCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAA 388
+ AEEAL+ LNGT +G Q +RLSWGR+P+NKQ + NQWN YYG Y+ YGY A+
Sbjct: 338 NDAEEALQKLNGTVIGKQTVRLSWGRNPANKQFRDFGNQWNGAYYG-GHIYDGYGYGLAS 396
Query: 389 PQDPSMY---YGGYPGYGNYQQ 407
P DPSMY YG Y YGN+QQ
Sbjct: 397 PHDPSMYHAAYGAYTVYGNHQQ 418
>gi|357116772|ref|XP_003560152.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 470
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/335 (63%), Positives = 251/335 (74%), Gaps = 10/335 (2%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTG--EVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
+IR+LWIGDLQYWMDE YL+ FA G +V +VK+IRNKQTGQ EGYGFIEF SRA AE
Sbjct: 112 DIRSLWIGDLQYWMDEAYLHNAFAPMGPQQVASVKIIRNKQTGQPEGYGFIEFHSRAAAE 171
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRA 196
L +FNG MPN + F+LNWAS AG++R DD DHTIFVGDLA+DVTD MLQE F+A
Sbjct: 172 YALASFNGHAMPNVDLPFKLNWASASAGDRRGDDGSDHTIFVGDLASDVTDSMLQEIFKA 231
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS +GA VV DR TGR+KGYGFVRFGD +EQ RAMTEMNGV S+R +RIGPA NKK
Sbjct: 232 SYPSVRGANVVTDRATGRSKGYGFVRFGDVNEQTRAMTEMNGVTLSSRQLRIGPAANKKN 291
Query: 257 VSGQQQYPKASYQNSQVAQSDD---DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+ QQ Y YQ SQ +Q +D DPNNTT+FVG LDS + + +LR++F+ YG++ +VK
Sbjct: 292 MGTQQTYSTNGYQ-SQSSQGNDVQNDPNNTTIFVGGLDSNIDENYLRQVFTPYGEVGYVK 350
Query: 314 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA-QPDPNQWN-AG 371
IP GKRCGFVQF RSCAEEA+ LNGT +GG N+RLSWGRS NKQA Q D NQ N +
Sbjct: 351 IPVGKRCGFVQFTSRSCAEEAINALNGTPIGGNNVRLSWGRSTQNKQAPQQDANQGNGSN 410
Query: 372 YYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQ 406
YYGY QG + Y Y A QDPSM GY GYGNY+
Sbjct: 411 YYGYQQGNDAY-YGAPNAQDPSMQNYGYSGYGNYE 444
>gi|222629596|gb|EEE61728.1| hypothetical protein OsJ_16246 [Oryza sativa Japonica Group]
Length = 607
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/386 (57%), Positives = 265/386 (68%), Gaps = 34/386 (8%)
Query: 26 QAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLW 85
Q PPQ AA E++TLW
Sbjct: 4 QPPPQAHYGQ---------------------VPPPQPYYAAPPPQAMPAPAAADEVKTLW 42
Query: 86 IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
IGDLQ WMDE+Y+ CFA TGEV +VK+IR+KQ+GQ++GYGF+EF SRA A+R+LQT+NG
Sbjct: 43 IGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQTYNG 102
Query: 146 TPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAK 205
MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YPS KGAK
Sbjct: 103 QMMPNVEMVFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAK 160
Query: 206 VVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPK 265
VV D++T R+KGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NKKT Q++ P
Sbjct: 161 VVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQERVP- 219
Query: 266 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 325
N+Q AQS++DPNNTT+FVG LD VT++ L+++F+ YG++VHVKIP GKRCGFVQ+
Sbjct: 220 ----NAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQY 275
Query: 326 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQW-----NAGYYGYAQGYE 380
+R AE+AL +L GT +GGQN+RLSWGRS SNKQ Q D NQW GYYG
Sbjct: 276 VNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYYGGYGQGY 335
Query: 381 NYGYAAAAPQDPSMY-YGGYPGYGNY 405
A PQDP+MY YG Y GY NY
Sbjct: 336 EAYGGYAQPQDPNMYGYGAYAGYPNY 361
>gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 443
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/335 (62%), Positives = 249/335 (74%), Gaps = 8/335 (2%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E RT+WIGDL +WMDE YL+TCFA TGE+V++KVIRNKQTG EGYGF+EF + A AE+V
Sbjct: 107 ENRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHATAEKV 166
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQ + G MPN EQ FRLNWA+F G+KR D+ PD +IFVGDLAADVTD +L ETF +RY
Sbjct: 167 LQNYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFVSRY 226
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS K AKVV D TGR+KGYGFVRFGD++E+ +AMTEMNGV+CS+R MRIG AT +K+
Sbjct: 227 PSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIGAATPRKSTG 286
Query: 259 GQQQYPKASYQNS-QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG 317
Q Q S S Q Q+D D NTT+FVG LD VTDE L++ FSQYG++V VKIP G
Sbjct: 287 YQHQGGYVSNGASGQAFQADGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVG 346
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP--NQWNAGYYGY 375
K CGFVQFA RS AEEAL+ LNGT +G Q +RLSWGR+P+NKQ NQW YYG
Sbjct: 347 KGCGFVQFASRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQQLRSDFGNQWGGAYYG- 405
Query: 376 AQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQQ 407
Q Y+ YGYA P DPSMY YG YP YG++QQ
Sbjct: 406 GQIYDGYGYALPPPHDPSMYAAPYGAYPVYGSHQQ 440
>gi|356521484|ref|XP_003529385.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/327 (63%), Positives = 242/327 (74%), Gaps = 16/327 (4%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
EIRT+W+GDL +WMDE YL+ CFAHTGEVV+ KVIRNKQTGQ EGYGF+EF SRA AE+V
Sbjct: 99 EIRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRATAEKV 158
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRAR 197
LQ +NGT MPN +Q FRLNWA+F AGE+R D T D +IFVGDLA DVTD MLQETF R
Sbjct: 159 LQNYNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFVGDLAIDVTDAMLQETFAGR 218
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y S KGAKVVID TGR+KGYGFVRFGDE+E+ RAMTEMNGV+CS+RPMRIG AT KKT
Sbjct: 219 YSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKTY 278
Query: 258 SGQQQYPKASY-------QNSQVAQ---SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 307
QQQY + N VAQ S+ D NNTT+FVG LDS +DE LR+ F Q+G
Sbjct: 279 GYQQQYSSQAVLLAGGHAANGAVAQGSHSEGDLNNTTIFVGGLDSDTSDEDLRQPFLQFG 338
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 367
++V VKIP GK CGFVQFADR AEEA+ LNGT +G Q +RLSWGRSP NK + D
Sbjct: 339 EVVSVKIPVGKGCGFVQFADRKNAEEAIHALNGTVIGKQTVRLSWGRSPGNKHWRSDS-- 396
Query: 368 WNAGYYGYAQGYENYGYAAAAPQDPSM 394
N GY+G Q Y +G+A QD +M
Sbjct: 397 -NGGYFG-GQSYGGHGFAVRQNQDIAM 421
>gi|224104133|ref|XP_002313332.1| predicted protein [Populus trichocarpa]
gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/345 (61%), Positives = 250/345 (72%), Gaps = 19/345 (5%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW DE+YL +CFAHTGEVV++K+IRNK TGQ EGYGF+EF+S A AER+
Sbjct: 18 EVRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPEGYGFVEFVSHAAAERI 77
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQT+NGT MP EQ FRLNWASFG GE+R D P+H+IFVGDLA DVTDY+LQETFR Y
Sbjct: 78 LQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVHY 137
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS +GAKVV D TGR+KGYGFV+F DE+E+ RAMTEMNGVFCSTRPMRI AT KKT S
Sbjct: 138 PSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVFCSTRPMRISMATPKKTTS 197
Query: 259 GQQQY--PKASY------QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
QQQY PKA Y QV +D D NTT+FVGNLD T+E LR+ F Q G++
Sbjct: 198 FQQQYAVPKAFYPAPAYTAPVQVVSADGDVTNTTIFVGNLDPNATEEDLRQTFLQLGEIA 257
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS-NKQAQPDPNQWN 369
VKIPAG+ CGFVQFA R+ AEEA++ + G +G Q +R+SWG+ +QWN
Sbjct: 258 SVKIPAGRGCGFVQFATRTSAEEAIQRMQGHVIGQQPVRISWGKKQDLTATWGQQVDQWN 317
Query: 370 AGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQPQQ 413
A YYGY QGY+ Y Y DPS+Y Y Y GY PQ PQQ
Sbjct: 318 A-YYGYGQGYDAYAYGGT--HDPSLYAYNAYAGY-----PQYPQQ 354
>gi|75334879|sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/356 (59%), Positives = 260/356 (73%), Gaps = 20/356 (5%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q Q + +T+WIGDLQ WMDE+YL++CF+ GEV++VK+IRNKQTGQ E YGF+EF
Sbjct: 73 PTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEF 132
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYM 189
+ A AE+VLQ++NGT MPN EQ FRLNWA F GEKR +T D +IFVGDLA+DVTD M
Sbjct: 133 NTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTM 192
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L++TF +RYPS KGAKVV+D TG +KGYGFVRFGDESE+ RAMTEMNGV+CS+R MRIG
Sbjct: 193 LRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIG 252
Query: 250 PATNKKTVSGQQQYPK------ASYQNSQVA----QSDDDPNNTTVFVGNLDSIVTDEHL 299
AT KK S +QY Y ++ A QSD D +NTT+FVG LDS VTDE L
Sbjct: 253 VATPKKP-SAHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEEL 311
Query: 300 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
R+ F+Q+G++V VKIPAGK CGFVQF+DRS A+EA++ L+G +G Q +RLSWGRSP+NK
Sbjct: 312 RQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANK 371
Query: 360 QAQPDP-NQWNAGYYGYAQGYENYGYAAAAPQDPSMY-----YGGYPG-YGNYQQP 408
Q + D +QWN GY G Q Y YGY A+ QD MY YG YGN+QQP
Sbjct: 372 QMRTDSGSQWNGGYNG-RQNYGGYGYGASQNQDSGMYATGAAYGASSNRYGNHQQP 426
>gi|222640040|gb|EEE68172.1| hypothetical protein OsJ_26296 [Oryza sativa Japonica Group]
Length = 329
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/317 (66%), Positives = 248/317 (78%), Gaps = 11/317 (3%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
MDE ++ CFA TGE+ +VK+IR+KQTGQ++GYGFIEF S AGAERVLQT+NG MPN E
Sbjct: 1 MDENTVSACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERVLQTYNGAMMPNVE 60
Query: 153 QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLT 212
Q +RLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YPS KGAKVV D++T
Sbjct: 61 QTYRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMT 118
Query: 213 GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQ 272
R+KGYGFV+FGD SEQ RAMTEMNG+ CS+RPMRIGPA NKK Q++ P A Q
Sbjct: 119 MRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRIGPAANKKATGVQEKVPSA-----Q 173
Query: 273 VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAE 332
QSD DP+NTT+FVG LD VTD+ L+++F+ YG +VHVKIP GKRCGFVQFA+R+ A+
Sbjct: 174 GVQSDSDPSNTTIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFVQFANRASAD 233
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQW-NAGYYGYAQGYENYGYAAAAP 389
EAL +L GT +GGQN+RLSWGRSPSN+QAQP D NQW A Y G GY A P
Sbjct: 234 EALVLLQGTLIGGQNVRLSWGRSPSNRQAQPQQDSNQWGGANAGYYGYGQGYEGYGYAQP 293
Query: 390 QDPSMY-YGGYPGYGNY 405
QDP+MY YG Y GY NY
Sbjct: 294 QDPNMYGYGAYAGYPNY 310
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 17/148 (11%)
Query: 16 MAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAM----WATQAAAPQAAGVAVP 71
M + Y + + P +Q M+ +P PA Q P A GV
Sbjct: 119 MRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRIGPAANKKATGVQEKVPSAQGV--- 175
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
Q P T+++G L + + L F G+VV VK+ K+ GF++F
Sbjct: 176 -QSDSDPSNT-TIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRC------GFVQFA 227
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNW 159
+RA A+ L GT + G QN RL+W
Sbjct: 228 NRASADEALVLLQGTLI--GGQNVRLSW 253
>gi|116788528|gb|ABK24911.1| unknown [Picea sitchensis]
Length = 397
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/335 (63%), Positives = 252/335 (75%), Gaps = 21/335 (6%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAER 138
EI+TLW+GDLQYWMDE YL TCF+ GEVV +VK+IRNKQTGQ EGYGF+E SRA AER
Sbjct: 49 EIKTLWVGDLQYWMDENYLQTCFSSNGEVVVSVKIIRNKQTGQPEGYGFVELDSRASAER 108
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRAR 197
+LQT +GTPMPN FRLNWA+FGAG++R + ++IFVGDL +V D +LQETF++R
Sbjct: 109 ILQTLHGTPMPNSPHPFRLNWATFGAGDRRTEPGTGYSIFVGDLGPEVIDILLQETFQSR 168
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y S K AKVVID TGRTKGYGFVRFGDE+E+ RAMTEMNGV+C +RPMRI AT KK++
Sbjct: 169 YSSVKSAKVVIDANTGRTKGYGFVRFGDENEKNRAMTEMNGVYCCSRPMRINEATPKKSL 228
Query: 258 SGQQQYP-KASYQN--------SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQ 308
QQ Y K +Y Q QSD+DPNNTT+FVG LD TDE LR++F +G+
Sbjct: 229 GLQQSYSMKGNYYTQAYGGAVAGQGFQSDNDPNNTTIFVGGLDPNATDEDLRQVFGPFGE 288
Query: 309 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA------- 361
+V+VKIP GK CGFVQF +RS AEEAL+ L+GT +G Q+IRLSWGRSP+NKQ
Sbjct: 289 IVYVKIPVGKGCGFVQFTNRSSAEEALQKLHGTIIGQQSIRLSWGRSPANKQTASWGVQP 348
Query: 362 QPDPNQWNAG--YYGYAQGYENYGYAAAAPQDPSM 394
QPDPNQWN G YY Y QGYE YGYA A QDP+M
Sbjct: 349 QPDPNQWNGGGAYYSYGQGYEAYGYAPPA-QDPTM 382
>gi|356562301|ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 401
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/405 (56%), Positives = 273/405 (67%), Gaps = 21/405 (5%)
Query: 12 PPPPMAAHQYQYQQQAPPQQQPPPQ-PSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAV 70
PPPP Q A PQQ P Q P+ M+MP PP +A P A
Sbjct: 6 PPPPR-----QSPAVARPQQWVPMQYPAAAAMVMPHH--MLPPQHYAPPPYVPYHHQYAA 58
Query: 71 PPQQQ---GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
PQ Q G GE +T+WIGDL +WMDE YL+ CFA TGE+ ++KVIRNKQTG EGYGF
Sbjct: 59 QPQHQHQNGSGGENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGF 118
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK-RDDTPDHTIFVGDLAADVT 186
+EF S A AE+VLQ + G MPN EQ FRLNWA+F G+K D+ PD +IFVGDLAADVT
Sbjct: 119 VEFYSHATAEKVLQNYAGILMPNAEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVT 178
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
D +L ETF + YPS K AKVV D TGR+KGYGFVRFGD++E+ +AMT+MNGV+CS+RPM
Sbjct: 179 DSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPM 238
Query: 247 RIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 306
RIG AT +K+ SG QQ N QS+ D NTT+FVG LD V+DE LR+ FSQY
Sbjct: 239 RIGAATPRKS-SGHQQ---GGLSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQY 294
Query: 307 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPN 366
G++V VKIP GK CGFVQFA+R+ AEEAL+ LNGT +G Q +RLSWGR+P+NKQ + D
Sbjct: 295 GEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFG 354
Query: 367 Q-WNAGYYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQQ 407
W YYG A Y+ YGYA DPS+Y YG YP YG +QQ
Sbjct: 355 SPWTGAYYG-APMYDGYGYALPPRHDPSIYAAAYGAYPLYGGHQQ 398
>gi|224067280|ref|XP_002302445.1| predicted protein [Populus trichocarpa]
gi|222844171|gb|EEE81718.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/388 (55%), Positives = 266/388 (68%), Gaps = 16/388 (4%)
Query: 35 PQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQ---------QQGQPGEIRTLW 85
P + M MPPQ PP A A ++G G+ +T+
Sbjct: 40 PVAAMVMQHMPPQHYGLPPPQHYMAATAYHQYQHHHHLPHVQQQQQQQREGSSGDNKTIC 99
Query: 86 IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
IGDL +WMDE YL+TCFA TGE+ ++KVIR+KQTG EGYGF+EF + A AE+VLQ + G
Sbjct: 100 IGDLHHWMDENYLHTCFASTGEIASIKVIRSKQTGLSEGYGFVEFFTHATAEKVLQNYGG 159
Query: 146 TPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
MPN EQ FRLNWA+F G+KR D+TPD +IFVGDLAADVTD +LQETF ++Y S K A
Sbjct: 160 ILMPNTEQPFRLNWATFSTGDKRSDNTPDLSIFVGDLAADVTDSLLQETFASKYQSVKSA 219
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP 264
KVV D TGR+KGYGFVRFGD++E+ +AMTEMNGV+CS+RPMRIG AT +K+ QQQ
Sbjct: 220 KVVFDANTGRSKGYGFVRFGDDTERTQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQGG 279
Query: 265 KASY-QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFV 323
S +SQ QSD D +N T+FVG LD VTDE L++ FSQYG++V VKIP K CGFV
Sbjct: 280 YGSNGASSQGFQSDGDSSNATIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVSKGCGFV 339
Query: 324 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ-WNAGYYGYAQGYENY 382
QFA+R+ AEEAL+ LNGT +G Q +RLSWGR+P +KQ + D + WN YYG Q Y+ Y
Sbjct: 340 QFANRNNAEEALQKLNGTVIGKQTVRLSWGRNPGHKQHRADFSSPWNGAYYG-GQVYDGY 398
Query: 383 GYAAAAPQDPSMY---YGGYPGYGNYQQ 407
GYA P DPS Y YG YP YGN+QQ
Sbjct: 399 GYALPPPHDPSTYAAAYGAYPMYGNHQQ 426
>gi|224137382|ref|XP_002327112.1| predicted protein [Populus trichocarpa]
gi|222835427|gb|EEE73862.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/344 (61%), Positives = 257/344 (74%), Gaps = 10/344 (2%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
QQ+ GE +T+WIGDL +WMDE YL++CF TGE+ ++KVIRNKQTG EGYGF+EF++
Sbjct: 84 QQREGSGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLT 143
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQ 191
A AE+VLQ + G MPN EQ FRLNWA+F G+KR D+ PD +IFVGDLAADVTD +LQ
Sbjct: 144 HATAEKVLQNYGGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLQ 203
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETF ++YPS K AKVV D TGR+KGYGFVRFGD+SE+ +AMTEMNGV+CS+RPMRIG A
Sbjct: 204 ETFVSKYPSVKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRIGAA 263
Query: 252 TNKKTVSGQQQYPKASY-QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
T +K+ QQQ S ++Q QSD D NNTT+FVG LD VTDE L++ FSQYG++V
Sbjct: 264 TPRKSSGYQQQGGYGSNGASAQGFQSDGDSNNTTIFVGGLDPNVTDEDLKQPFSQYGEIV 323
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ-WN 369
VKIP GK CGFVQFA+R AEEAL+ LNGT +G Q +RLSWGR+P+NKQ + D WN
Sbjct: 324 SVKIPVGKGCGFVQFANRDNAEEALQKLNGTVIGKQTVRLSWGRNPANKQFRADFGSPWN 383
Query: 370 AGYYGYAQGYENYGYAAAAPQDPSM------YYGGYPGYGNYQQ 407
YYG Q Y+ YGYA P DPSM YG YP YG++QQ
Sbjct: 384 GAYYG-GQVYDGYGYALPPPHDPSMYAAAAAAYGAYPIYGSHQQ 426
>gi|359492060|ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 418
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/389 (56%), Positives = 265/389 (68%), Gaps = 21/389 (5%)
Query: 39 PYMM-------------MMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLW 85
+M MMPPQ Q + Q Q QQQG + RT+W
Sbjct: 28 QWMAMQYPAAAMVMQHQMMPPQHYPQHFVAYHHQPHQYQHQHQQQHQQQQGSNADNRTIW 87
Query: 86 IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
+GDL WMDE YL++CFA TGE+ ++KVIRNKQTG EGYGF+EF S A AE+VLQ + G
Sbjct: 88 VGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAG 147
Query: 146 TPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
MPN +Q FRLNWA+F G+KR D PD +IFVGDLA+DV+D +L ETF +YPS K A
Sbjct: 148 VLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAA 207
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP 264
KVV D TGR+KGYGFVRFGDE+E+ +AMTEMNGV+CS+RPMRIG AT +K+ QQQY
Sbjct: 208 KVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYS 267
Query: 265 KAS--YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGF 322
N QSD D NTT+FVG LD V+DE LR+ FSQYG++V VKIP GK CGF
Sbjct: 268 SHGGYASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGF 327
Query: 323 VQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNAGYYGYAQGYEN 381
VQFA+R+ AE+AL+ LNGT +G Q +RLSWGR+P+NKQ + D NQW+ YYG Q Y+
Sbjct: 328 VQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYG-GQVYDG 386
Query: 382 YGYAAAAPQDPSMY---YGGYPGYGNYQQ 407
YGYA P DP+MY YG YP YGN+QQ
Sbjct: 387 YGYALPPPHDPTMYAAAYGAYPVYGNHQQ 415
>gi|326495566|dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/413 (55%), Positives = 273/413 (66%), Gaps = 26/413 (6%)
Query: 3 QPAPGAVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAA 62
QP A+P PP AA +Q P Q P P+ + PP P QP A + A
Sbjct: 83 QPHWVAMPFAPPGAAAMVVPHQMAPAPPHQFAPHFVPFHAVAPPPPPLQPRVGVAMGSPA 142
Query: 63 PQAAGVAVPPQQQGQPG--EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTG 120
P A QPG E +T+W+GDL YWMDE YL+TCF +TGEVVA+KVIRNKQTG
Sbjct: 143 PAA-----------QPGQEENKTIWVGDLHYWMDENYLHTCFGYTGEVVAIKVIRNKQTG 191
Query: 121 QIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVG 179
Q EGYGF+EF S A AE+VL F G MPN +Q FR+NWASF G++R D DH+IFVG
Sbjct: 192 QSEGYGFVEFYSHAAAEKVLDGFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVG 251
Query: 180 DLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
DLA+DV D L ETF +RY S KGAKVVID TGR+KGYGFVRFGD+SE+ AMTEMNGV
Sbjct: 252 DLASDVNDTALLETFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTNAMTEMNGV 311
Query: 240 FCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 299
+CSTRPMRIGPAT +K+ S A+SD D NTTVFVG LD V+++ L
Sbjct: 312 YCSTRPMRIGPATPRKSSG-------TSGSTGSSARSDGDLTNTTVFVGGLDPNVSEDDL 364
Query: 300 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
++ FSQYG++ VKIP GK+CGFVQF R AE+AL+ LNG+ +G Q +RLSWGR+P+NK
Sbjct: 365 KQTFSQYGEISSVKIPVGKQCGFVQFLQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANK 424
Query: 360 QAQPDP-NQWNAG-YYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQQ 407
Q + D NQWN G YY + Y YGY AA DP MY YG YP YGN QQ
Sbjct: 425 QLRSDNGNQWNNGMYYAPSPFYNGYGYPAAPFPDPGMYAAAYGAYPLYGNQQQ 477
>gi|359492062|ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/387 (56%), Positives = 265/387 (68%), Gaps = 26/387 (6%)
Query: 39 PYMM-------------MMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLW 85
+M MMPPQ Q + Q Q QQQG + RT+W
Sbjct: 28 QWMAMQYPAAAMVMQHQMMPPQHYPQHFVAYHHQPHQYQHQHQQQHQQQQGSNADNRTIW 87
Query: 86 IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
+GDL WMDE YL++CFA TGE+ ++KVIRNKQTG EGYGF+EF S A AE+VLQ + G
Sbjct: 88 VGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAG 147
Query: 146 TPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
MPN +Q FRLNWA+F G+KR D PD +IFVGDLA+DV+D +L ETF +YPS K A
Sbjct: 148 VLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAA 207
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP 264
KVV D TGR+KGYGFVRFGDE+E+ +AMTEMNGV+CS+RPMRIG AT +K+ QQQY
Sbjct: 208 KVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQY- 266
Query: 265 KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
S QSD D NTT+FVG LD V+DE LR+ FSQYG++V VKIP GK CGFVQ
Sbjct: 267 ------SSHVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQ 320
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNAGYYGYAQGYENYG 383
FA+R+ AE+AL+ LNGT +G Q +RLSWGR+P+NKQ + D NQW+ YYG Q Y+ YG
Sbjct: 321 FANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYG-GQVYDGYG 379
Query: 384 YAAAAPQDPSMY---YGGYPGYGNYQQ 407
YA P DP+MY YG YP YGN+QQ
Sbjct: 380 YALPPPHDPTMYAAAYGAYPVYGNHQQ 406
>gi|293336608|ref|NP_001168401.1| uncharacterized protein LOC100382170 [Zea mays]
gi|223948043|gb|ACN28105.1| unknown [Zea mays]
gi|414585352|tpg|DAA35923.1| TPA: hypothetical protein ZEAMMB73_028165 [Zea mays]
Length = 432
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/293 (68%), Positives = 238/293 (81%), Gaps = 11/293 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE Y+ CF++TGEV VK+IR+K +GQ++GYGF+EF SRA AERV
Sbjct: 90 EVRTLWIGDLQYWMDENYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERV 149
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN + FRLNWAS AGEKRDDTP++TIFVGDLAADVTDY+LQETFR YP
Sbjct: 150 LQTYNGQMMPNVDLTFRLNWAS--AGEKRDDTPEYTIFVGDLAADVTDYLLQETFRVHYP 207
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA ++K G
Sbjct: 208 SVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNTGG 267
Query: 260 --QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG 317
Q++ P NSQ AQS++DPNNTT+FVG LD VT++ L+++FS YG++VHVKIP G
Sbjct: 268 VVQERVP-----NSQGAQSENDPNNTTIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVG 322
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQW 368
KRCGFVQF R AE+AL ML G +G QN+RLSWGRS SNKQAQP + NQW
Sbjct: 323 KRCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQAQPQQESNQW 375
>gi|226492692|ref|NP_001144988.1| uncharacterized protein LOC100278143 [Zea mays]
gi|195649537|gb|ACG44236.1| hypothetical protein [Zea mays]
Length = 436
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/390 (56%), Positives = 268/390 (68%), Gaps = 28/390 (7%)
Query: 28 PPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIG 87
PP Q P P+ + PP+ Q+ P A+ A P Q GQ E +++W+G
Sbjct: 63 PPPQFAPTHFVPFHAVAPPRAQSVPAAVALGSPA----------PHQPGQE-ENKSVWVG 111
Query: 88 DLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP 147
DL YWMDE YL++CF +TGEVVA+KVIRNKQTGQ EGYGF+EF S A AE+VL+ F+G
Sbjct: 112 DLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFSGHI 171
Query: 148 MPNGEQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKV 206
MPN +Q FRLNWASF G++R D DH+IFVGDLA+DV D L E F +RY S KGAKV
Sbjct: 172 MPNTDQPFRLNWASFSMGDRRSDAASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKV 231
Query: 207 VIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKA 266
VID TGR+KGYGFVRFGD+SE+ +AMTEMNGV+CS+RPMRIGPAT +K+ A
Sbjct: 232 VIDANTGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSA 291
Query: 267 SYQNSQVAQSD-DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 325
A+SD D NTTVFVG LD V++E LR+ FSQYG++ VKIP GK+CGFVQF
Sbjct: 292 -------ARSDGGDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQF 344
Query: 326 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAG--YYGYAQGYENY 382
A R AE+AL+ LNG+ +G QN+RLSWGR+P+NKQ + D NQWN G YY Y Y
Sbjct: 345 AQRKNAEDALQGLNGSTIGKQNVRLSWGRNPANKQFRGDNGNQWNNGGMYYAAPPFYNGY 404
Query: 383 GYAAAAP-QDPSMY----YGGYPGYGNYQQ 407
GY AAAP DP MY YG YP YGN QQ
Sbjct: 405 GYPAAAPFPDPGMYAAPAYGAYPFYGNQQQ 434
>gi|242033859|ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
gi|241918178|gb|EER91322.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
Length = 409
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/366 (60%), Positives = 259/366 (70%), Gaps = 23/366 (6%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAV 111
PPAMW A P E RTLWIGDLQYWMDE YL +CF+ GEV++V
Sbjct: 43 PPAMWGQPPPQAAPAPAPAPSGGG-AGDEARTLWIGDLQYWMDENYLYSCFSQAGEVISV 101
Query: 112 KVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DD 170
K+IRNKQTGQ EGYGFIEF + A AE+VLQ +NG MPN Q F+LNWA+ GAGEKR DD
Sbjct: 102 KIIRNKQTGQPEGYGFIEFGNHALAEQVLQNYNGQMMPNVNQPFKLNWATSGAGEKRGDD 161
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
D+TIFVGDLA+DVTD++LQ+TF++RYPS K AKVV DR TGR+KGYGFV+F D EQ
Sbjct: 162 GSDYTIFVGDLASDVTDFILQDTFKSRYPSVKSAKVVFDRTTGRSKGYGFVKFADLDEQT 221
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNL 290
RAMTEMNG +CS+RPMR+GPA+NKK GQ Q YQN+Q SD DPNNTTVFVG L
Sbjct: 222 RAMTEMNGQYCSSRPMRLGPASNKKNTGGQPQPSSTIYQNTQGTDSDSDPNNTTVFVGGL 281
Query: 291 DSIVTDEHLRELFSQYGQLVHVKIPAGKR---------CGFVQFADRSCAEEALRMLNGT 341
D VTDE L++ FS YG+L++VKIP GKR + AEEA+RMLNG+
Sbjct: 282 DPSVTDELLKQTFSPYGELLYVKIPVGKRCGFVQYSNR---------ASAEEAIRMLNGS 332
Query: 342 QLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYEN-YGYAAAAPQDPSMY-YGGY 399
QLGGQ+IRLSWGRSP+NKQ Q + NQW+ G Y + YGY A PQDP+MY Y Y
Sbjct: 333 QLGGQSIRLSWGRSPANKQPQQEQNQWSGGGYYGYPQGYDPYGY-ARPPQDPAMYAYTPY 391
Query: 400 PGYGNY 405
PGYGNY
Sbjct: 392 PGYGNY 397
>gi|356552180|ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 425
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/411 (54%), Positives = 272/411 (66%), Gaps = 21/411 (5%)
Query: 13 PPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAM-WATQAAAPQAAGVAVP 71
PPP + QQ P Q P M+PPQ A PP + + Q A VP
Sbjct: 17 PPPRQSPAVARPQQWLPMQYPAAAMVMPHHMLPPQHYAPPPYVPFHHHHHHHQYAAPHVP 76
Query: 72 ----------PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQ 121
Q G GE +T+WIGDL +WMDE YL+ CFA TGE+ ++KVIRNKQTG
Sbjct: 77 NQHQQQQQHHHHQNGSGGENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGL 136
Query: 122 IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK-RDDTPDHTIFVGD 180
EGYGF+EF S A AE+VLQ + G MPN EQ FRLNWA+F G+K D+ PD +IFVGD
Sbjct: 137 SEGYGFVEFYSHATAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGD 196
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
LAADVTD +L ETF + YPS K AKVV D TGR+KGYGFVRFGD++++ +AMT+MNGV+
Sbjct: 197 LAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVY 256
Query: 241 CSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
CS+RPMRIG AT +K+ SG QQ N QS+ D NTT+FVG LD V+DE LR
Sbjct: 257 CSSRPMRIGAATPRKS-SGHQQ---GGQSNGTANQSEADSTNTTIFVGGLDPNVSDEDLR 312
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
+ FSQYG++V VKIP GK CGFVQFA+R+ AEEAL+ LNGT +G Q +RLSWGR+P+NKQ
Sbjct: 313 QPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTSIGKQTVRLSWGRNPANKQ 372
Query: 361 AQPD-PNQWNAGYYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQQ 407
+ D N W YYG A Y+ YGYA DPS+Y YG YP YG +QQ
Sbjct: 373 FRMDFGNPWTGAYYG-APMYDGYGYALTPRHDPSIYAAAYGAYPLYGGHQQ 422
>gi|30682335|ref|NP_849641.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332190644|gb|AEE28765.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 306
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/332 (65%), Positives = 246/332 (74%), Gaps = 31/332 (9%)
Query: 1 MMQPAPGAVPP--PPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWAT 58
M QP PG + P PPP A QY YQQ PP PP MW
Sbjct: 2 MQQPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPP----------------PPQMWNP 45
Query: 59 QAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ 118
QAAAP P Q EIRTLWIGDLQYWMDE +L CFAHTGE+V+ KVIRNKQ
Sbjct: 46 QAAAP-------PSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQ 98
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDHTIF 177
TGQ+EGYGFIEF S A AERVLQTFN P+P+ +Q FRLNWAS +G+KRDD+PD+TIF
Sbjct: 99 TGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIF 158
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDLAADVTDY+L ETFRA YPS KGAKVVIDR+TGRTKGYGFVRF DESEQ+RAMTEMN
Sbjct: 159 VGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMN 218
Query: 238 GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQV-AQSDDDPNNTTVFVGNLDSIVTD 296
GV CSTRPMRIGPA +KK V+GQ+ SYQ+S +D+DPNNTTVFVG LD+ VTD
Sbjct: 219 GVPCSTRPMRIGPAASKKGVTGQRD----SYQSSAAGVTTDNDPNNTTVFVGGLDASVTD 274
Query: 297 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADR 328
+HL+ +FSQYG++VHVKIPAGKRCGFVQF+++
Sbjct: 275 DHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEK 306
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 23/204 (11%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + + L F A AKV+ ++ TG+ +GYGF+ F + R +
Sbjct: 63 TLWIGDLQYWMDENFLYGCF-AHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQ 121
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
N N S Q + ++ + DD + T+FVG+L + V
Sbjct: 122 TFN---------------NAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIFVGDLAADV 166
Query: 295 TDEHLRELF-----SQYGQLVHVKIPAG--KRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
TD L E F S G V + G K GFV+F+D S A+ +NG +
Sbjct: 167 TDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRP 226
Query: 348 IRLSWGRSPSNKQAQPDPNQWNAG 371
+R+ S Q D Q +A
Sbjct: 227 MRIGPAASKKGVTGQRDSYQSSAA 250
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/357 (59%), Positives = 259/357 (72%), Gaps = 22/357 (6%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q Q + +T+WIGDLQ WMDE+YL++CF+ GEV++VK+IRNKQTGQ E YGF+EF
Sbjct: 73 PTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEF 132
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYM 189
+ A AE+VLQ++NGT MPN EQ FRLNWA F GEKR +T D +IFVGDLA+DVTD M
Sbjct: 133 NTHAAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTM 192
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L++TF +RYPS KGAKVV+D TG +KGYGFVRFGDESE+ RAMTEMNGV+CS+R MRIG
Sbjct: 193 LRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIG 252
Query: 250 PATNKKTVSGQQQYP------KASYQNSQVA----QSDDDPNNTTVFVGNLDSIVTDEHL 299
AT KK S QQQY Y ++ A QSD D +NTT+FVG LDS VTDE L
Sbjct: 253 VATPKKP-SAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEEL 311
Query: 300 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
R+ F+Q+G++V VKIPAGK CGFVQF+DRS A+EA++ L+G +G Q +RLSWGR+ +NK
Sbjct: 312 RQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRT-ANK 370
Query: 360 QAQPDP-NQWNAGYYGYAQGYENYGYAAAAPQDPSM-------YYGGYPGYGNYQQP 408
Q + D +QWN GY G Q Y YGY A+ QD M Y GYGN+QQP
Sbjct: 371 QMRADSGSQWNGGYNGR-QNYGGYGYGASQNQDSGMYATGAAAYGASSNGYGNHQQP 426
>gi|357158812|ref|XP_003578248.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 431
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/419 (54%), Positives = 271/419 (64%), Gaps = 29/419 (6%)
Query: 4 PAPGAVPPPP--------PPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAM 55
P A+ PPP PP AA Q AP PPQ +P+ + PP +
Sbjct: 25 PTVAALAPPPHWVAMPFAPPGAAAMVMPHQMAPA----PPQFAPHFVPFHAVAAPPPPPL 80
Query: 56 WATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIR 115
A A G P QG E +T+W+GDL YWMDE YL++CF +TGEVVA+KVIR
Sbjct: 81 QPRPAPVAVALG---SPAAQGGQEENKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIR 137
Query: 116 NKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDH 174
NKQTGQ EGYGF+EF S A AE+VL F G MPN +Q FR+NWASF G++R D DH
Sbjct: 138 NKQTGQSEGYGFVEFYSHAAAEKVLDGFAGHIMPNTDQPFRINWASFSMGDRRSDIASDH 197
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+IFVGDLA+DV D L E F +RY S KGAKVVID TGR+KGYGFVRFGD+SE+ AMT
Sbjct: 198 SIFVGDLASDVNDATLLEIFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMT 257
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
EMNGV+CSTRPMRIGPAT +K+ S A+SD D NTTVFVG LD V
Sbjct: 258 EMNGVYCSTRPMRIGPATPRKSSG-------NSGSTGSSARSDGDLTNTTVFVGGLDPNV 310
Query: 295 TDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+++ LR+ FSQYG++ VKIP GK+CGFVQF R AE+AL+ LNG+ +G Q +RLSWGR
Sbjct: 311 SEDDLRQSFSQYGEISSVKIPVGKQCGFVQFLQRKNAEDALQGLNGSTIGKQTVRLSWGR 370
Query: 355 SPSNKQAQPDP-NQWNAG-YYGYAQGYENYGYAAAAPQDPSMY----YGGYPGYGNYQQ 407
+P+NKQ + D NQWN G YY + Y YGY AA DP MY YG YP YGN QQ
Sbjct: 371 NPANKQLRSDNGNQWNNGMYYAASPFYNGYGYPAAPFPDPGMYTAAAYGAYPFYGNQQQ 429
>gi|115479619|ref|NP_001063403.1| Os09g0462700 [Oryza sativa Japonica Group]
gi|113631636|dbj|BAF25317.1| Os09g0462700, partial [Oryza sativa Japonica Group]
Length = 441
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/342 (60%), Positives = 247/342 (72%), Gaps = 14/342 (4%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P+ GQ E +T+W+GDL YWMDE YL++CF +TGEVVA+KVIRNKQTGQ EGYGF+EF
Sbjct: 106 PRGGGQE-ENKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFY 164
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYML 190
S A AE+VL+ F G MPN +Q FR+NWASF G++R D DH+IFVGDLA+DV D L
Sbjct: 165 SHAAAEKVLEGFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTL 224
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
ETF RY S KGAKVVID TGR+KGYGFVRFGD++E+ AMTEMNGV+CSTRPMRIGP
Sbjct: 225 LETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGP 284
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
AT +KT S A+SD D NTTVFVG LD V+++ LR+ FSQYG++
Sbjct: 285 ATPRKT-------SGTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEIS 337
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWN 369
VKIP GK+CGFVQF R AE+AL+ LNG+ +G Q +RLSWGR+P+NKQ + D +QWN
Sbjct: 338 SVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQLRSDNGSQWN 397
Query: 370 AG-YYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQQ 407
G YY + Y YGY A P DP MY YG YP YGN QQ
Sbjct: 398 NGMYYAASPFYSGYGYPAPFPADPGMYAAAYGAYPFYGNQQQ 439
>gi|302784144|ref|XP_002973844.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
gi|302803590|ref|XP_002983548.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300148791|gb|EFJ15449.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300158176|gb|EFJ24799.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
Length = 350
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/353 (62%), Positives = 266/353 (75%), Gaps = 18/353 (5%)
Query: 70 VPPQQQGQP-------GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI 122
+PP +QGQ GE++TLW+GDLQYWMDE YL +CFAHT EV KVIRNKQTG
Sbjct: 2 LPPLKQGQAHSPGHANGELKTLWVGDLQYWMDEGYLYSCFAHTSEVQVAKVIRNKQTGYS 61
Query: 123 EGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDL 181
EGYGF+EF + + AE+VLQ+FNGT MP+ + FRLNWA FG GE+R D PD +IFVGDL
Sbjct: 62 EGYGFVEFTNHSTAEKVLQSFNGTQMPSTDIAFRLNWACFGIGERRPDQGPDFSIFVGDL 121
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
A DVTDYMLQETF++RY S KGAKVV+D T R+KGYGFVRFGDE+E++RAMTEM GV+C
Sbjct: 122 APDVTDYMLQETFQSRYSSVKGAKVVMDTTTARSKGYGFVRFGDEAEKMRAMTEMAGVYC 181
Query: 242 STRPMRIGPATNKKTVSGQQQYPKASYQNSQV-AQSDDDPNNTTVFVGNLDSIVTDEHLR 300
STRPMRI AT KK+++ P +QN V +D+DP+NTTVFVG LD V DE L+
Sbjct: 182 STRPMRISTATPKKSLA---TIPPKGFQNFGVPPLTDNDPSNTTVFVGGLDHSVKDEDLK 238
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK- 359
++FSQ+G + +VKIPAGK CGFVQF R+ AEEAL+ L+G+ +G Q IRLSWGRSP+NK
Sbjct: 239 QVFSQFGDIQYVKIPAGKNCGFVQFYTRASAEEALQKLHGSTIGQQTIRLSWGRSPANKQ 298
Query: 360 QAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYP-GYGNYQQPQQ 410
Q QP+ NQWN YYGY QGYE YG+ A PQDP Y YG +P YG Y PQQ
Sbjct: 299 QVQPEFNQWNGPYYGYGQGYECYGF-APPPQDPGAYAYGNFPQAYGTY--PQQ 348
>gi|356550323|ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 410
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/353 (59%), Positives = 255/353 (72%), Gaps = 20/353 (5%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
QQ E+RTLWIGDLQYW+DE YL+ CF HTGEV+++K+IRNK TGQ EGYGF+EF+S
Sbjct: 5 QQASTIEEVRTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVS 64
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQ 191
A AERVLQT+NGT MP +Q FRLNWASFG GE+R D P+H+IFVGDLA DVTDY+LQ
Sbjct: 65 HAAAERVLQTYNGTQMPATDQTFRLNWASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQ 124
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETFRA YPS +GAKVV D T R+KGYGFV+F DE+E+ RAMTEMNGV+CSTRPMRI A
Sbjct: 125 ETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAA 184
Query: 252 TNKKTVSG---------QQQYPKASYQN--SQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
T KKT + YP +Y + QV D D NNTT+FVGNLD V++E L+
Sbjct: 185 TPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQVQPPDYDVNNTTIFVGNLDLNVSEEELK 244
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
+ Q+G++V VKI GK GFVQF R+ AEEA++ + G +G Q +R+SWGR+ + +Q
Sbjct: 245 QNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQGKMIGQQVVRISWGRTLTARQ 304
Query: 361 AQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQPQ 412
DPNQW+A YYGY QGYE Y Y A DPS+Y YG YPGY Y PQQ +
Sbjct: 305 M--DPNQWSA-YYGYGQGYEAYAYGPA--HDPSLYAYGAYPGYAQY--PQQVE 350
>gi|215765810|dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 345
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/332 (61%), Positives = 245/332 (73%), Gaps = 13/332 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+T+W+GDL YWMDE YL++CF +TGEVVA+KVIRNKQTGQ EGYGF+EF S A AE+VL+
Sbjct: 19 KTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLE 78
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPS 200
F G MPN +Q FR+NWASF G++R D DH+IFVGDLA+DV D L ETF RY S
Sbjct: 79 GFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSS 138
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
KGAKVVID TGR+KGYGFVRFGD++E+ AMTEMNGV+CSTRPMRIGPAT +KT SG
Sbjct: 139 VKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKT-SGT 197
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 320
P S A+SD D NTTVFVG LD V+++ LR+ FSQYG++ VKIP GK+C
Sbjct: 198 SG-PTGS-----AARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQC 251
Query: 321 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAG-YYGYAQG 378
GFVQF R AE+AL+ LNG+ +G Q +RLSWGR+P+NKQ + D +QWN G YY +
Sbjct: 252 GFVQFVQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQLRSDNGSQWNNGMYYAASPF 311
Query: 379 YENYGYAAAAPQDPSMY---YGGYPGYGNYQQ 407
Y YGY A P DP MY YG YP YGN QQ
Sbjct: 312 YSGYGYPAPFPADPGMYAAAYGAYPFYGNQQQ 343
>gi|356500047|ref|XP_003518846.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/299 (65%), Positives = 228/299 (76%), Gaps = 12/299 (4%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
EIRT+W+GDL +WMDE YL+ CFAHTGEVV+ KVIRNKQTGQ EGYGF+EF SR AE+V
Sbjct: 98 EIRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRGTAEKV 157
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRAR 197
LQ +NGT MPN +Q FRLNWA+F AGE+R D T D +IFVGDLA DVTD MLQ+TF R
Sbjct: 158 LQNYNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFVGDLAIDVTDAMLQDTFAGR 217
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y S KGAKVVID TGR+KGYGFVRFGDE+E+ RAMTEMNGV+CS+RPMRIG AT KKT
Sbjct: 218 YSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKTY 277
Query: 258 SGQQQYPKASY-------QNSQVAQ---SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 307
QQQY + N VAQ S+ D NNTT+FVG LDS +DE LR+ F Q+G
Sbjct: 278 GFQQQYSSQAVVLAGGHSANGAVAQGSHSEGDINNTTIFVGGLDSDTSDEDLRQPFLQFG 337
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPN 366
++V VKIP GK CGFVQFADR AEEA++ LNGT +G Q +RLSWGRSP NK + D N
Sbjct: 338 EVVSVKIPVGKGCGFVQFADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKHWRSDSN 396
>gi|194707750|gb|ACF87959.1| unknown [Zea mays]
gi|414885794|tpg|DAA61808.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 433
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/346 (60%), Positives = 253/346 (73%), Gaps = 18/346 (5%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P Q GQ E +++W+GDL YWMDE YL++CF +TGEVVA+KVIRNKQTGQ EGYGF+EF
Sbjct: 94 PHQPGQE-ENKSVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFY 152
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYML 190
S A AE+VL+ F+G MPN +Q FRLNWASF G++R D+ DH+IFVGDLA+DV D L
Sbjct: 153 SHAAAEKVLEGFSGHIMPNTDQPFRLNWASFSMGDRRSDSASDHSIFVGDLASDVNDATL 212
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
E F +RY S KGAKVVID TGR+KGYGFVRFGD+SE+ +AMTEMNGV+CS+RPMRIGP
Sbjct: 213 LEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGP 272
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSD-DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 309
AT +K+ A A+SD D NTTVFVG LD V++E LR+ FSQYG++
Sbjct: 273 ATPRKSSGTSGSNGSA-------ARSDGGDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEI 325
Query: 310 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQW 368
VKIP GK+CGFVQFA R AE+AL+ LNG+ +G QN+RLSWGR+P+NKQ + D NQW
Sbjct: 326 SSVKIPIGKQCGFVQFAQRKNAEDALQGLNGSTIGKQNVRLSWGRNPANKQFRGDNGNQW 385
Query: 369 NAG--YYGYAQGYENYGYAAAAP-QDPSMY----YGGYPGYGNYQQ 407
N G YY Y YGY AAAP DP MY YG YP YGN QQ
Sbjct: 386 NNGGMYYAAPPFYNGYGYPAAAPFPDPGMYAAPAYGAYPFYGNQQQ 431
>gi|356550321|ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 419
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/360 (58%), Positives = 256/360 (71%), Gaps = 25/360 (6%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
QQ E+RTLWIGDLQYW+DE YL+ CF HTGEV+++K+IRNK TGQ EGYGF+EF+S
Sbjct: 5 QQASTIEEVRTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVS 64
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQ 191
A AERVLQT+NGT MP +Q FRLNWASFG GE+R D P+H+IFVGDLA DVTDY+LQ
Sbjct: 65 HAAAERVLQTYNGTQMPATDQTFRLNWASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQ 124
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETFRA YPS +GAKVV D T R+KGYGFV+F DE+E+ RAMTEMNGV+CSTRPMRI A
Sbjct: 125 ETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAA 184
Query: 252 TNKKTVSG---------QQQYPKASYQN--SQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
T KKT + YP +Y + QV D D NNTT+FVGNLD V++E L+
Sbjct: 185 TPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQVQPPDYDVNNTTIFVGNLDLNVSEEELK 244
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
+ Q+G++V VKI GK GFVQF R+ AEEA++ + G +G Q +R+SWGR+ + +Q
Sbjct: 245 QNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQGKMIGQQVVRISWGRTLTARQ 304
Query: 361 AQP-------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQPQ 412
P DPNQW+A YYGY QGYE Y Y A DPS+Y YG YPGY Y PQQ +
Sbjct: 305 DLPGGWGPQMDPNQWSA-YYGYGQGYEAYAYGPA--HDPSLYAYGAYPGYAQY--PQQVE 359
>gi|356510359|ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 409
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/388 (57%), Positives = 263/388 (67%), Gaps = 21/388 (5%)
Query: 29 PQQQPPPQPSPYMMMMPPQPQAQPP---AMWATQAAAPQAAGVAVPPQQQGQPGEIRTLW 85
P Q P MMPPQ A P A Q PQA G E +T+W
Sbjct: 31 PMQYPAAAMVMQHHMMPPQHYAPPQPYMAYHQYQQQVPQA-------HHLGSSAENKTVW 83
Query: 86 IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
+GDL +WMDE YL+ CFA TGE+ ++KVIRNKQTG EGYGF+EF S A++VLQ + G
Sbjct: 84 VGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTADKVLQNYAG 143
Query: 146 TPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
MPN EQ FRLNWA+F G+KR D+ PD +IFVGDLAADVTD ML ETF RYPS K A
Sbjct: 144 ILMPNTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFTNRYPSVKAA 203
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP 264
KVV D TGR+KGYGFVRFGD++E+ +AMTEMNGV+CS+RPMRIG AT +KT SG QQ
Sbjct: 204 KVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKT-SGYQQ-- 260
Query: 265 KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
S N +QS+ D NTT+FVG LD VT E L++ FSQYG++V VKIP GK CGFVQ
Sbjct: 261 -GSQSNGTSSQSEADSTNTTIFVGGLDPNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFVQ 319
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNAGYYGYAQGYENYG 383
FA+R+ AEEAL+ LNGT +G Q +RLSWGRSP+NKQ + D N W+ YYG Y+ YG
Sbjct: 320 FANRNNAEEALQKLNGTTIGKQMVRLSWGRSPANKQFRADFGNAWSGAYYG-GPVYDGYG 378
Query: 384 YAAAAPQDPSM----YYGGYPGYGNYQQ 407
YA P DPS+ YG YP YG YQQ
Sbjct: 379 YALPPPYDPSIYAAAAYGAYPIYGGYQQ 406
>gi|388494114|gb|AFK35123.1| unknown [Medicago truncatula]
Length = 425
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 230/427 (53%), Positives = 279/427 (65%), Gaps = 26/427 (6%)
Query: 2 MQPAPGAVPPPPPPMAAHQYQYQQ----QAPPQQQPPPQ-PSPYMMM----MPPQPQAQP 52
MQ G+ P ++ Q QQ A PQQ P Q P+ M+M MPPQ A P
Sbjct: 1 MQQTNGSDSSSPSETTTNKQQRQQPPAPVAVPQQWIPMQYPTAAMVMPHHMMPPQHYAPP 60
Query: 53 PAMWATQAAAPQAAGVAVPPQQQ-------GQPGEIRTLWIGDLQYWMDETYLNTCFAHT 105
P + + VPP Q G GE +TLWIGDL WMDE+YL+ CFA T
Sbjct: 61 PYVPYHHHHHQFQQPLHVPPHQHQNHQNQHGSNGENKTLWIGDLHSWMDESYLHRCFAST 120
Query: 106 GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAG 165
GE+ +VKVIRNK +G EGYGF EF S A AE+VLQ + G MPN +Q FRLNWA+F G
Sbjct: 121 GEITSVKVIRNKHSGISEGYGFAEFFSHATAEKVLQNYAGILMPNADQAFRLNWATFSTG 180
Query: 166 EK-RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
+K D+ D +IFVGDLAADVTD +L ETF + YPS K AKVV D TGR+KGYGFVRFG
Sbjct: 181 DKGSDNVTDLSIFVGDLAADVTDSVLHETFSSSYPSVKAAKVVYDANTGRSKGYGFVRFG 240
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTT 284
DESE+ +AMT+MNGV+CS+RPMRIG AT +K+ SG Q N +QS+ D NTT
Sbjct: 241 DESERSQAMTQMNGVYCSSRPMRIGAATPRKS-SGHQ---PGGQTNGTSSQSEADSTNTT 296
Query: 285 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 344
+FVG LDS VTDE L++ FSQYG++ VKIP GK CGFVQFA+R+ AEEAL+ LNGT +G
Sbjct: 297 IFVGGLDSNVTDEDLKQTFSQYGEIASVKIPVGKGCGFVQFANRNNAEEALQKLNGTMIG 356
Query: 345 GQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAP-QDPSMY---YGGYP 400
Q +RLSWGR+P+ KQ + D W AG Y + Y+ YGYA +P DPSMY YGGYP
Sbjct: 357 KQTVRLSWGRNPAYKQFRLDVGSW-AGPYFPSPIYDGYGYAMPSPHHDPSMYPLAYGGYP 415
Query: 401 GYGNYQQ 407
YG + Q
Sbjct: 416 IYGGHSQ 422
>gi|115451047|ref|NP_001049124.1| Os03g0174100 [Oryza sativa Japonica Group]
gi|113547595|dbj|BAF11038.1| Os03g0174100, partial [Oryza sativa Japonica Group]
Length = 438
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/359 (58%), Positives = 245/359 (68%), Gaps = 25/359 (6%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
A P Q E+RTLWIGDLQYW DE YL CFAHTGE+ +VK+IRNK T EGYGFI
Sbjct: 25 AAPYHQPTSLEEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFI 84
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTD 187
EFIS AE+VLQT+NGT MP E FRLNWASF +GE+R D PDH+IFVGDLA DVTD
Sbjct: 85 EFISHEVAEKVLQTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTD 144
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
Y+LQETFR YPS KGAKVV D TGR+KGYGFV+F DE+E+ RAMTEMNG++CSTRPMR
Sbjct: 145 YLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMR 204
Query: 248 IGPATNKKTVSGQQQ-------YPKASYQNSQV--AQSDDDPNNTTVFVGNLDSIVTDEH 298
I A KKT Q Q YP A Y QV D DP NTT+F+GNLD VT++
Sbjct: 205 ISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDE 264
Query: 299 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
LR++ Q+G+L++VKIPA K CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP++
Sbjct: 265 LRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPAS 324
Query: 359 KQAQP-------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 410
KQ Q DPNQW + Y A QDPS Y Y GY Y PQQ
Sbjct: 325 KQDQSAVWSQQADPNQWA------SAYYGYGYDAYGYAQDPSYAYNSYAGYTQY--PQQ 375
>gi|356538950|ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/343 (60%), Positives = 250/343 (72%), Gaps = 23/343 (6%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE+YL+ CFAH GEVV++K+IRNK TGQ EGYGF+EF+S A AE
Sbjct: 8 EVRTLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAF 67
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
L+T+NG MP EQ FRLNWASFG D PDH+IFVGDLA DVTD++LQETFRA YP
Sbjct: 68 LRTYNGAQMPGTEQTFRLNWASFG-----DSGPDHSIFVGDLAPDVTDFLLQETFRAHYP 122
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVV D TGR+KGYGFV+F DE+++ RAMTEMNGV+CSTRPMRI AT KK S
Sbjct: 123 SVKGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 260 QQQY--PKASYQ-------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
Q QY PKA YQ S VA ++D NNTTV +GNLD VT+E L++ F Q+G +V
Sbjct: 183 QHQYAPPKAMYQFPAYSAPVSAVA-PENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIV 241
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNA 370
VKI AGK G+VQF R AE+A++ + G +G Q I++SWG S + +Q DP+QW+A
Sbjct: 242 LVKIYAGKGYGYVQFGTRVSAEDAIQRMQGKVIGQQVIQISWGSSMTARQM--DPSQWSA 299
Query: 371 GYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQPQ 412
YYGY QGYE Y Y A QDPS+Y YG Y GY Y PQQ +
Sbjct: 300 -YYGYGQGYEAYAYGAT--QDPSIYTYGAYAGYAQY--PQQVE 337
>gi|108706453|gb|ABF94248.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215694482|dbj|BAG89475.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 416
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/359 (58%), Positives = 245/359 (68%), Gaps = 25/359 (6%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
A P Q E+RTLWIGDLQYW DE YL CFAHTGE+ +VK+IRNK T EGYGFI
Sbjct: 3 AAPYHQPTSLEEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFI 62
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTD 187
EFIS AE+VLQT+NGT MP E FRLNWASF +GE+R D PDH+IFVGDLA DVTD
Sbjct: 63 EFISHEVAEKVLQTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTD 122
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
Y+LQETFR YPS KGAKVV D TGR+KGYGFV+F DE+E+ RAMTEMNG++CSTRPMR
Sbjct: 123 YLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMR 182
Query: 248 IGPATNKKTVSGQQQ-------YPKASYQNSQV--AQSDDDPNNTTVFVGNLDSIVTDEH 298
I A KKT Q Q YP A Y QV D DP NTT+F+GNLD VT++
Sbjct: 183 ISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDE 242
Query: 299 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
LR++ Q+G+L++VKIPA K CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP++
Sbjct: 243 LRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPAS 302
Query: 359 KQAQP-------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 410
KQ Q DPNQW + Y A QDPS Y Y GY Y PQQ
Sbjct: 303 KQDQSAVWSQQADPNQWA------SAYYGYGYDAYGYAQDPSYAYNSYAGYTQY--PQQ 353
>gi|326528543|dbj|BAJ93453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/331 (61%), Positives = 240/331 (72%), Gaps = 24/331 (7%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW DE YL CFAHTGEV +VK+IRNK +G EGYGFIEFIS AE+V
Sbjct: 15 EVRTLWIGDLQYWADENYLYGCFAHTGEVQSVKLIRNKLSGLPEGYGFIEFISHEAAEKV 74
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NG MP E FRLNWASF +GEKR D PDH+IFVGDLA DVTDY+LQETFR Y
Sbjct: 75 LQAYNGAQMPGTELTFRLNWASFSSGEKRPDAGPDHSIFVGDLAPDVTDYLLQETFRVNY 134
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S +GAKVV D TGR+KGYGFV+F DE+E+ RAM+EMNGV+CSTRPMRI A KK+
Sbjct: 135 SSVRGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRPMRISAAIPKKSSG 194
Query: 259 GQQQ-------YPKASYQ--NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 309
Q Q YP +Y +Q D D NTT+F+GNLD VT+E LR++ Q+G+L
Sbjct: 195 SQLQYGAAKAMYPATAYAIPQAQTVLPDSDLTNTTIFIGNLDPNVTEEELRQICVQFGEL 254
Query: 310 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP------ 363
++VKIP GK CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP+NKQ Q
Sbjct: 255 IYVKIPVGKGCGFVQYASRASAEEAVQRLHGTVIGQQVVRLSWGRSPANKQDQSAAWGQQ 314
Query: 364 -DPNQWNAGYYGYAQGYENYGYAAAAPQDPS 393
DPNQW+A YY Y GY+ YGY PQDPS
Sbjct: 315 ADPNQWSA-YYSY--GYDPYGY----PQDPS 338
>gi|218192181|gb|EEC74608.1| hypothetical protein OsI_10216 [Oryza sativa Indica Group]
Length = 416
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/359 (58%), Positives = 245/359 (68%), Gaps = 25/359 (6%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
A P Q E+RTLWIGDLQYW DE YL CFAHTGE+ +VK+IRNK T EGYGFI
Sbjct: 3 AAPYHQPTSLEEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFI 62
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTD 187
EFIS AE+VLQT+NGT MP E FRLNWASF +GE+R D PDH+IFVGDLA DVTD
Sbjct: 63 EFISHEVAEKVLQTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTD 122
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
Y+LQETFR YPS KGAKVV D TGR+KGYGFV+F DE+E+ RAMTEMNG++CSTRPMR
Sbjct: 123 YLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMR 182
Query: 248 IGPATNKKTVSGQQQ-------YPKASYQNSQV--AQSDDDPNNTTVFVGNLDSIVTDEH 298
I A KKT Q Q YP A Y QV D DP NTT+F+GNLD VT++
Sbjct: 183 ISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDE 242
Query: 299 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
LR++ Q+G+L++VKIPA K CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP++
Sbjct: 243 LRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPAS 302
Query: 359 KQAQP-------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 410
KQ Q DPNQW + Y A QDPS Y Y GY Y PQQ
Sbjct: 303 KQDQSAVWSQQADPNQWA------SAYYGYGYDAYGYAQDPSYAYNSYAGYTQY--PQQ 353
>gi|357465449|ref|XP_003603009.1| RNA-binding protein [Medicago truncatula]
gi|355492057|gb|AES73260.1| RNA-binding protein [Medicago truncatula]
Length = 420
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/403 (53%), Positives = 263/403 (65%), Gaps = 29/403 (7%)
Query: 29 PQQQPPPQPSPYMMMMPP----QPQAQPPA--------MWATQAAAPQAAGVA------- 69
PQQ+ PP PSP+ + PP P PPA + P +A
Sbjct: 20 PQQKTPPPPSPHSLTFPPPQQWVPMQYPPAAMVMPHHMLPPQHYPPPPHHYMAYHHYLHH 79
Query: 70 VPPQQQGQPG-EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
VP G + +TLW+GDL +WMDE YL+ CFA TGE+ ++KVIRNKQT Q EGYGF+
Sbjct: 80 VPHVHHGSSAADNKTLWVGDLHHWMDENYLHRCFASTGEIFSIKVIRNKQTCQTEGYGFV 139
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVT 186
EF S AE+VLQT+ G MPN EQ FRLNWA+F G+ + D+ PD +IFVGDLAADVT
Sbjct: 140 EFTSHGTAEKVLQTYAGMLMPNTEQPFRLNWATFSTGDHKRSDNVPDLSIFVGDLAADVT 199
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
D ML ETF +YPS K AKVV D TGR+KGYGFVRFGD+ E+ +A+ EMNGVFCS+R M
Sbjct: 200 DTMLLETFSDKYPSVKAAKVVFDANTGRSKGYGFVRFGDDGERSKALNEMNGVFCSSRAM 259
Query: 247 RIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 306
RIG AT +K+ SG QQ N +QSD D NTT+FVG LD T E LR+ FSQY
Sbjct: 260 RIGAATPRKS-SGYQQ---GGQSNGTPSQSDTDSTNTTIFVGGLDPSATAEDLRQPFSQY 315
Query: 307 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPN 366
G++V VKIP GK CGFVQFA+R+ AEEAL+ LNGT +G Q +RLSWGR+P+NKQ + +
Sbjct: 316 GEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTVGKQTVRLSWGRNPANKQFRSEFG 375
Query: 367 Q-WNA-GYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQ 407
WN YYG Y+ YGYA P D SMY YP YG +QQ
Sbjct: 376 SPWNGPAYYG-GPAYDGYGYAMPHPYDQSMYAAAYPMYGGHQQ 417
>gi|356538948|ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/350 (59%), Positives = 251/350 (71%), Gaps = 28/350 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE+YL+ CFAH GEVV++K+IRNK TGQ EGYGF+EF+S A AE
Sbjct: 8 EVRTLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAF 67
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
L+T+NG MP EQ FRLNWASFG D PDH+IFVGDLA DVTD++LQETFRA YP
Sbjct: 68 LRTYNGAQMPGTEQTFRLNWASFG-----DSGPDHSIFVGDLAPDVTDFLLQETFRAHYP 122
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVV D TGR+KGYGFV+F DE+++ RAMTEMNGV+CSTRPMRI AT KK S
Sbjct: 123 SVKGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 260 QQQY--PKASYQ-------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
Q QY PKA YQ S VA ++D NNTTV +GNLD VT+E L++ F Q+G +V
Sbjct: 183 QHQYAPPKAMYQFPAYSAPVSAVA-PENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIV 241
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ-------AQP 363
VKI AGK G+VQF R AE+A++ + G +G Q I++SWG S + +Q Q
Sbjct: 242 LVKIYAGKGYGYVQFGTRVSAEDAIQRMQGKVIGQQVIQISWGSSMTARQDVPGGWGVQM 301
Query: 364 DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQPQ 412
DP+QW+A YYGY QGYE Y Y A QDPS+Y YG Y GY Y PQQ +
Sbjct: 302 DPSQWSA-YYGYGQGYEAYAYGAT--QDPSIYTYGAYAGYAQY--PQQVE 346
>gi|357113824|ref|XP_003558701.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 418
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/360 (57%), Positives = 243/360 (67%), Gaps = 25/360 (6%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
+A P Q E+RTLWIGDLQ+W DE YL CFAHTGEV +VK+IRNK T EGYGF
Sbjct: 3 MAAPYHQPTTLEEVRTLWIGDLQFWADEAYLYNCFAHTGEVQSVKIIRNKVTNLPEGYGF 62
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVT 186
IEFIS AE+VLQT+NG MP E FRLNWASF +GE+R D PDH+IFVGDLA DVT
Sbjct: 63 IEFISHEAAEKVLQTYNGAQMPGSEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVT 122
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
DY+LQETFR Y S +GAKVV D TGR+KGYGFV+F DE+E+ RAM+EMNGV+CSTRPM
Sbjct: 123 DYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRPM 182
Query: 247 RIGPATNKKTVSGQQQ-------YPKASYQ--NSQVAQSDDDPNNTTVFVGNLDSIVTDE 297
RI A KK+ Q Q YP A+Y +Q A D D NTT+F+GNLD T+E
Sbjct: 183 RISAAIPKKSSGSQLQYGTAKAMYPAAAYAVPQAQPALPDSDLTNTTIFIGNLDPNATEE 242
Query: 298 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
LR+L Q+G+L++VKIP GK CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP+
Sbjct: 243 ELRQLCVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQVVRLSWGRSPA 302
Query: 358 NKQAQP-------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 410
NKQ Q DPNQW Y QDPS YG Y GY Y PQQ
Sbjct: 303 NKQDQSAAWTQQADPNQWT------GAYYGYGYDPYGYAQDPSYAYGAYAGYSQY--PQQ 354
>gi|297741313|emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/307 (62%), Positives = 232/307 (75%), Gaps = 12/307 (3%)
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRA 134
G EI+TLW+GDL WMD+ YL TCF HTGEV ++K+IRNKQTGQ EGYGF+EF SRA
Sbjct: 2 HGSTDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRA 61
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQET 193
AE++L ++NGT MPN EQ FRLNWA+F G++R D D +IFVGDLA+DVTD +LQET
Sbjct: 62 TAEKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQET 121
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F RYPS KGAKVV D TGR+KGYGFVRFGDE+E+ RAM EMNG++CS+RPMRIG AT
Sbjct: 122 FATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATP 181
Query: 254 KKTVSGQQQYPK-------ASYQNSQVA---QSDDDPNNTTVFVGNLDSIVTDEHLRELF 303
KK QQQY + N VA Q++ D NTT+FVG LDS VTDE LR+ F
Sbjct: 182 KKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSF 241
Query: 304 SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP 363
SQ+G++V VKIP GK CGFVQFA+R+ AE+AL+ LNGT +G Q +RLSWGR+P++KQ +
Sbjct: 242 SQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQWRN 301
Query: 364 DP-NQWN 369
D NQWN
Sbjct: 302 DSNNQWN 308
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
gi|222871356|gb|EEF08487.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/306 (63%), Positives = 236/306 (77%), Gaps = 13/306 (4%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
G E +T+W+GDL +WMDE YL+ CF+HTGEV +VK+IRNKQTGQ+EGYGF+EF SRA
Sbjct: 59 GSNEEAKTIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSRAA 118
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETF 194
AE+VLQ+++G+ MPN EQ FRLNWASF AGE+R D D +IFVGDLAADVTD MLQETF
Sbjct: 119 AEKVLQSYSGSMMPNTEQPFRLNWASF-AGERRADPGSDLSIFVGDLAADVTDSMLQETF 177
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+YPS KGAKVVID TGR+KGYGFVRFGDE+E+ RAM EMNG FCS+RPMRIG AT K
Sbjct: 178 AGKYPSVKGAKVVIDSNTGRSKGYGFVRFGDENEKTRAMMEMNGAFCSSRPMRIGVATPK 237
Query: 255 KTVSGQQQYPKASY----------QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
K + QQQY + +Q +QSD D NNTT+FVG +DS VTDE LR+ FS
Sbjct: 238 KPSAYQQQYSSQALVLAGGHASNGAMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQPFS 297
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 364
Q+G++V VKIP GK C FVQFA+R AE+AL+ LNGT +G Q +RLSWGR+P+NKQ + D
Sbjct: 298 QFGEVVSVKIPVGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTPANKQWRGD 357
Query: 365 P-NQWN 369
NQW+
Sbjct: 358 HGNQWH 363
>gi|242042043|ref|XP_002468416.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
gi|241922270|gb|EER95414.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
Length = 415
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/360 (57%), Positives = 246/360 (68%), Gaps = 25/360 (6%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
+A P Q E+RTLWIGDLQYW DE YL +CFAHTGEV +VK+IRNK T EGYGF
Sbjct: 1 MAAPYHQPTSLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGF 60
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVT 186
IEF+S AE++LQT+NGT MP E FRLNWASF +GE+R D DH+IFVGDLA DVT
Sbjct: 61 IEFVSHEAAEKILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVT 120
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
DY+LQETFR YPS +GAKVV D TGR+KGYGFV+F DE+E+ RAMTEMNGV+CSTRPM
Sbjct: 121 DYLLQETFRVNYPSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPM 180
Query: 247 RIGPATNKKTVSGQQQYP--KASYQNS-------QVAQSDDDPNNTTVFVGNLDSIVTDE 297
RI A KK+ Q QY KA Y + Q D DP NTT+F+GNLD VT++
Sbjct: 181 RISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVTED 240
Query: 298 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
LR++ Q+G+L++VKIP GK CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP+
Sbjct: 241 ELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPA 300
Query: 358 NKQA-------QPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 410
+KQ Q DPNQW Y A QDPS YG Y GY Y PQQ
Sbjct: 301 SKQDPSAVWSQQADPNQWA------NTYYGYGYDAYGYAQDPSYAYGAYAGYSQY--PQQ 352
>gi|449523756|ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 437
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/309 (63%), Positives = 233/309 (75%), Gaps = 11/309 (3%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P++QG E++TLWIGDLQ WMDETYLN CFAHTGEV +VKVI NKQTGQ EGYGF+EF
Sbjct: 90 PRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFF 149
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYML 190
S AE+VLQ +NGT MPN E FRLNWA+F A ++R DT D +IFVGDLAADVTD +L
Sbjct: 150 SHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAIL 209
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
QETF +RY S KGAKVVID +GR+KGYGFVRFGDE+E+ RAMTEMNG++CS+RPMRIG
Sbjct: 210 QETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGV 269
Query: 251 ATNKKTVSGQQQYPKASY---------QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 301
AT KK QQ Y + Q +QSD + NNTT+FVG LDS V+DE L++
Sbjct: 270 ATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKQ 329
Query: 302 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
FS++G +V VKIP GK CGFVQFA+R AE+A++ LNGT +G Q +RLSWGRS NKQ
Sbjct: 330 AFSKFGDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQW 389
Query: 362 QPDP-NQWN 369
+ D NQWN
Sbjct: 390 RGDSNNQWN 398
>gi|223948225|gb|ACN28196.1| unknown [Zea mays]
gi|414590425|tpg|DAA40996.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 503
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/324 (62%), Positives = 239/324 (73%), Gaps = 8/324 (2%)
Query: 79 GEIRTLWIGDLQYWMDETYLN-TCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
GE+RTLWIGDLQYWMDE YL+ FA + + +VK+IRNKQTG EGYGFIEF S+A A
Sbjct: 143 GEVRTLWIGDLQYWMDENYLHYNAFAPVAQQIASVKIIRNKQTGHSEGYGFIEFYSQAAA 202
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFR 195
E L FNG MPN E F+LNWAS G+KR D+ DH IFVGDLA DVTD ML++ FR
Sbjct: 203 EHTLMNFNGQMMPNIEMAFKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFR 262
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
A YPS +GAKVV+DR+TGR KGYGFV FGD +EQ RAMTEMNG+ STR MRIG A +KK
Sbjct: 263 ANYPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMRIGAAASKK 322
Query: 256 TVSGQQQYP-KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
QQ Y +YQ+SQ S++DPNNTTVFVG LDS V +E+LR++F+ YG++ +VKI
Sbjct: 323 NTDAQQTYATNGAYQSSQGNCSENDPNNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVKI 382
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA-QPDPN-QWNA-G 371
P GK CGFVQF RSCAEEA++MLNG+Q+GGQ RLSWGRS N+QA Q D N Q+N
Sbjct: 383 PVGKHCGFVQFTSRSCAEEAIQMLNGSQIGGQKARLSWGRSTQNRQASQHDANSQYNGNN 442
Query: 372 YYGYAQ-GYENYGYAAAAPQDPSM 394
YY Y Q G E Y Y A QDPS+
Sbjct: 443 YYRYQQPGNEGYSYGAPNAQDPSI 466
>gi|212276053|ref|NP_001130512.1| uncharacterized protein LOC100191611 [Zea mays]
gi|194689348|gb|ACF78758.1| unknown [Zea mays]
gi|414590424|tpg|DAA40995.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 472
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/324 (62%), Positives = 239/324 (73%), Gaps = 8/324 (2%)
Query: 79 GEIRTLWIGDLQYWMDETYLN-TCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
GE+RTLWIGDLQYWMDE YL+ FA + + +VK+IRNKQTG EGYGFIEF S+A A
Sbjct: 112 GEVRTLWIGDLQYWMDENYLHYNAFAPVAQQIASVKIIRNKQTGHSEGYGFIEFYSQAAA 171
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFR 195
E L FNG MPN E F+LNWAS G+KR D+ DH IFVGDLA DVTD ML++ FR
Sbjct: 172 EHTLMNFNGQMMPNIEMAFKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFR 231
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
A YPS +GAKVV+DR+TGR KGYGFV FGD +EQ RAMTEMNG+ STR MRIG A +KK
Sbjct: 232 ANYPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMRIGAAASKK 291
Query: 256 TVSGQQQYP-KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
QQ Y +YQ+SQ S++DPNNTTVFVG LDS V +E+LR++F+ YG++ +VKI
Sbjct: 292 NTDAQQTYATNGAYQSSQGNCSENDPNNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVKI 351
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA-QPDPN-QWNA-G 371
P GK CGFVQF RSCAEEA++MLNG+Q+GGQ RLSWGRS N+QA Q D N Q+N
Sbjct: 352 PVGKHCGFVQFTSRSCAEEAIQMLNGSQIGGQKARLSWGRSTQNRQASQHDANSQYNGNN 411
Query: 372 YYGYAQ-GYENYGYAAAAPQDPSM 394
YY Y Q G E Y Y A QDPS+
Sbjct: 412 YYRYQQPGNEGYSYGAPNAQDPSI 435
>gi|302142363|emb|CBI19566.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/322 (61%), Positives = 240/322 (74%), Gaps = 8/322 (2%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
MDE YL++CFA TGE+ ++KVIRNKQTG EGYGF+EF S A AE+VLQ + G MPN +
Sbjct: 1 MDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTD 60
Query: 153 QNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
Q FRLNWA+F G+KR D PD +IFVGDLA+DV+D +L ETF +YPS K AKVV D
Sbjct: 61 QPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDAN 120
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKAS--YQ 269
TGR+KGYGFVRFGDE+E+ +AMTEMNGV+CS+RPMRIG AT +K+ QQQY
Sbjct: 121 TGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYAS 180
Query: 270 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRS 329
N QSD D NTT+FVG LD V+DE LR+ FSQYG++V VKIP GK CGFVQFA+R+
Sbjct: 181 NGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRN 240
Query: 330 CAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNAGYYGYAQGYENYGYAAAA 388
AE+AL+ LNGT +G Q +RLSWGR+P+NKQ + D NQW+ YYG Q Y+ YGYA
Sbjct: 241 NAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYG-GQVYDGYGYALPP 299
Query: 389 PQDPSMY---YGGYPGYGNYQQ 407
P DP+MY YG YP YGN+QQ
Sbjct: 300 PHDPTMYAAAYGAYPVYGNHQQ 321
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + + L F+ GE+V+VK+ K G GF++F +R AE LQ
Sbjct: 195 TIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGK------GCGFVQFANRNNAEDALQK 248
Query: 143 FNGTPMPNGEQNFRLNW 159
NGT + G+Q RL+W
Sbjct: 249 LNGTVI--GKQTVRLSW 263
>gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/304 (61%), Positives = 237/304 (77%), Gaps = 13/304 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+T+WIGDLQ WMDE YL++CF+H GEV++VK+IRNKQTGQ E YGF+EF + A AE+VLQ
Sbjct: 33 KTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 92
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPS 200
++NGT MPN EQ FRLNWA+F AGEKR +T D +IFVGDLA+DVTD ML++TF +R+PS
Sbjct: 93 SYNGTMMPNAEQPFRLNWAAFSAGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRFPS 152
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
KGAKVV+D TG +KGYGFVRFGDESE+ RAMTEMNG++CS+RPMR+G AT KK S Q
Sbjct: 153 VKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGIYCSSRPMRVGVATPKKP-SAQ 211
Query: 261 QQYPK----------ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
QQ+ ++ + +QSD D +NTT+FVG LDS VTDE LR+ F+Q+G++V
Sbjct: 212 QQFSSQAVILSGGYASNGSATHGSQSDGDSSNTTIFVGGLDSDVTDEELRQSFTQFGEVV 271
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNA 370
VKIPAGK CGFVQF+DRS A+EA++ L+G +G Q +RLSWGRSP+NKQ + D
Sbjct: 272 SVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGN-GG 330
Query: 371 GYYG 374
GYYG
Sbjct: 331 GYYG 334
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK------RCGFVQFADRSC 330
+ +N T+++G+L + + +L FS G+++ VKI K R GFV+F +
Sbjct: 27 NSSEDNKTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 86
Query: 331 AEEALRMLNGTQL--GGQNIRLSW 352
AE+ L+ NGT + Q RL+W
Sbjct: 87 AEKVLQSYNGTMMPNAEQPFRLNW 110
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 34 PPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAA----GVAVPPQQQGQPGEIRTLWIGDL 89
+P + P +P AQ +++QA G A Q T+++G L
Sbjct: 194 SSRPMRVGVATPKKPSAQQQ--FSSQAVILSGGYASNGSATHGSQSDGDSSNTTIFVGGL 251
Query: 90 QYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMP 149
+ + L F GEVV+VK+ K G GF++F R+ A+ +Q +G +
Sbjct: 252 DSDVTDEELRQSFTQFGEVVSVKIPAGK------GCGFVQFSDRSSAQEAIQKLSGAII- 304
Query: 150 NGEQNFRLNW 159
G+Q RL+W
Sbjct: 305 -GKQAVRLSW 313
>gi|356519168|ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 410
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/406 (55%), Positives = 269/406 (66%), Gaps = 33/406 (8%)
Query: 26 QAPPQQQPPPQ------PSPYMMM----MPPQPQAQPP-----AMWATQAAAPQAAGVAV 70
QA Q+ PPPQ P+ M+M MPPQ A PP A Q P A+
Sbjct: 11 QATEQRTPPPQWMPMQYPAAAMVMQHHMMPPQHYAPPPPQPYMAYHHYQQQLPH----AL 66
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
QG E +T+W+GDL +WMDE YL+ CFA GE+ ++KVIRNKQTG EGYGF+EF
Sbjct: 67 HAHHQGSSAENKTVWVGDLHHWMDENYLHRCFASNGEISSIKVIRNKQTGLSEGYGFVEF 126
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYM 189
S AE+VLQ + G MPN EQ FRLNWA+FG G+KR D+ PD +IFVGDLAADVTD M
Sbjct: 127 YSHGTAEKVLQNYAGILMPNTEQPFRLNWATFGTGDKRSDNVPDLSIFVGDLAADVTDSM 186
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L ETF RYPS K AKVV D TGR+KGYGFVRFGD+ E+ +AMTEMNGV+CS+RPMRIG
Sbjct: 187 LHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDDERSQAMTEMNGVYCSSRPMRIG 246
Query: 250 PATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 309
AT +KT SG QQ S N +QS+ D NTT+FVG LDS VT E L++ FSQYG++
Sbjct: 247 AATPRKT-SGYQQ---GSQSNGISSQSEADSTNTTIFVGGLDSNVTAEDLKQPFSQYGEI 302
Query: 310 VHVKIPAGKRCGFVQFADRS----CAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD- 364
V VKIP GK CGF RS AEEAL+ LNGT +G Q +RLSWGR+P+NKQ + D
Sbjct: 303 VSVKIPVGKGCGFTICNSRSPGPKNAEEALQKLNGTTIGKQMVRLSWGRNPANKQFRADF 362
Query: 365 PNQWNAGYYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQQ 407
N W+ YYG Y+ YGYA DPS+Y YG YP YG +QQ
Sbjct: 363 GNAWSGAYYG-GPVYDGYGYALPPSHDPSIYAAAYGAYPIYGGHQQ 407
>gi|225428741|ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 416
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/309 (61%), Positives = 232/309 (75%), Gaps = 14/309 (4%)
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEV--VAVKVIRNKQTGQIEGYGFIEFIS 132
G EI+TLW+GDL WMD+ YL TCF HTGEV ++K+IRNKQTGQ EGYGF+EF S
Sbjct: 74 HGSTDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFS 133
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQ 191
RA AE++L ++NGT MPN EQ FRLNWA+F G++R D D +IFVGDLA+DVTD +LQ
Sbjct: 134 RATAEKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQ 193
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETF RYPS KGAKVV D TGR+KGYGFVRFGDE+E+ RAM EMNG++CS+RPMRIG A
Sbjct: 194 ETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVA 253
Query: 252 TNKKTVSGQQQYPK-------ASYQNSQVA---QSDDDPNNTTVFVGNLDSIVTDEHLRE 301
T KK QQQY + N VA Q++ D NTT+FVG LDS VTDE LR+
Sbjct: 254 TPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQ 313
Query: 302 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
FSQ+G++V VKIP GK CGFVQFA+R+ AE+AL+ LNGT +G Q +RLSWGR+P++KQ
Sbjct: 314 SFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQW 373
Query: 362 QPDP-NQWN 369
+ D NQWN
Sbjct: 374 RNDSNNQWN 382
>gi|238005936|gb|ACR34003.1| unknown [Zea mays]
gi|414865083|tpg|DAA43640.1| TPA: RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/360 (56%), Positives = 244/360 (67%), Gaps = 25/360 (6%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
+A P Q E+RTLWIGDLQYW DE YL +CFAHTGEV +VK+IRNK T EGYGF
Sbjct: 1 MAAPYHQPTSLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGF 60
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVT 186
IEF+S AE++LQT+NGT MP E FRLNWASF +GE+R D DH+IFVGDLA DVT
Sbjct: 61 IEFVSHEAAEKILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVT 120
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
DY+LQETFR Y S +GAKVV D TGR+KGYGFV+F DE+E+ RAMTEMNGV+CSTRPM
Sbjct: 121 DYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPM 180
Query: 247 RIGPATNKKTVSGQQQYP--KASYQNS-------QVAQSDDDPNNTTVFVGNLDSIVTDE 297
RI A KK+ Q QY KA Y + Q D DP NTT+F+GNLD V ++
Sbjct: 181 RISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVIED 240
Query: 298 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
LR++ Q+G+L++VKIP GK CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP+
Sbjct: 241 ELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPA 300
Query: 358 NKQA-------QPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 410
+KQ Q DPNQW Y A QDPS YG Y GY Y PQQ
Sbjct: 301 SKQDSSAVWSQQADPNQWA------NTYYGYGYDAYGYAQDPSYAYGAYAGYSQY--PQQ 352
>gi|226506980|ref|NP_001152183.1| LOC100285821 [Zea mays]
gi|195653617|gb|ACG46276.1| RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/360 (56%), Positives = 244/360 (67%), Gaps = 25/360 (6%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
+A P Q E+RTLWIGDLQYW DE YL +CFAHTGEV +VK+IRNK T EGYGF
Sbjct: 1 MAAPYHQPTSLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGF 60
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVT 186
IEF+S AE++LQT+NGT MP E FRLNWASF +GE+R D DH+IFVGDLA DVT
Sbjct: 61 IEFVSHEAAEKILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVT 120
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
DY+LQETFR Y S +GAKVV D TGR+KGYGFV+F DE+E+ RAMTEMNGV+CSTRPM
Sbjct: 121 DYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPM 180
Query: 247 RIGPATNKKTVSGQQQYP--KASYQNS-------QVAQSDDDPNNTTVFVGNLDSIVTDE 297
RI A KK+ Q QY KA Y + Q D DP NTT+F+GNLD V ++
Sbjct: 181 RISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVIED 240
Query: 298 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
LR++ Q+G+L++VKIP GK CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP+
Sbjct: 241 ELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPA 300
Query: 358 NKQA-------QPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 410
+KQ Q DPNQW Y A QDPS YG Y GY Y PQQ
Sbjct: 301 SKQDSSAVWSQQADPNQWA------NAYYGYGYDAYGYAQDPSYAYGAYAGYSQY--PQQ 352
>gi|357475467|ref|XP_003608019.1| RNA Binding Protein [Medicago truncatula]
gi|355509074|gb|AES90216.1| RNA Binding Protein [Medicago truncatula]
Length = 454
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/304 (62%), Positives = 229/304 (75%), Gaps = 17/304 (5%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P EIRT+W+GDL +WMDET+L+ CFAHTGEV + KVIRNKQTGQ EGYGF+EF +RA AE
Sbjct: 112 PEEIRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAE 171
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASF----GAGEKR--DDTPDHTIFVGDLAADVTDYMLQ 191
+VLQ FNGT MPN +Q FRLNWA+F G GE+R + T D ++FVGDLA DVTD MLQ
Sbjct: 172 KVLQNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQ 231
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETF +++ S KGAKVVID TGR+KGYGFVRFGDESE+ RAMTEMNGV+CS+RPMR+G A
Sbjct: 232 ETFASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVA 291
Query: 252 TNKKTVSGQQQYPK--------ASYQN---SQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
T KKT QQY + N +Q +QS+ D NNTT+FVG LDS ++DE LR
Sbjct: 292 TPKKTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDEDLR 351
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
+ F Q+G ++ VKIP GK CGFVQ ADR AEEA++ LNGT +G Q +RLSWGRSP NK
Sbjct: 352 QPFLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKH 411
Query: 361 AQPD 364
+ D
Sbjct: 412 GRND 415
>gi|414589689|tpg|DAA40260.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 424
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/362 (58%), Positives = 254/362 (70%), Gaps = 20/362 (5%)
Query: 59 QAAAPQAAGV--AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
Q AAP A V + P Q GQ E +T+W+GDL +WMDE YL+ CF +TGEVVA+KVIRN
Sbjct: 68 QLAAPVPAVVLGSPAPHQAGQE-ENKTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRN 126
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHT 175
KQTGQ EGYGF+EF S A AERVL+ F+G MPN +Q FRLNWASF G++R D DH+
Sbjct: 127 KQTGQSEGYGFVEFYSHAAAERVLEGFSGHIMPNTDQPFRLNWASFSMGDRRSDVASDHS 186
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
IFVGDLA+DV D L E F +RY S KGAKVVID TGR+KGYGFVRFGD+SE+ AMTE
Sbjct: 187 IFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTE 246
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 295
MNGV+CS+RPMRIGPAT +K+ ++ + D NTTVFVG LD V+
Sbjct: 247 MNGVYCSSRPMRIGPATPRKSSGTSGSNGSSARPDG------GDLTNTTVFVGGLDPDVS 300
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
+E LR+ FSQYG++ VKIP GK+CGFVQFA R AE+AL+ LNG+ +G Q +RLSWGR+
Sbjct: 301 EEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGSTIGKQAVRLSWGRN 360
Query: 356 PSNKQAQPDPN--QW-NAGYYGYAQGYEN--YGYAAAAPQ-DPSMY----YGGYPGYGNY 405
P+NKQ + D QW N G Y A + N YGY AAAP DP MY YG YP YGN
Sbjct: 361 PANKQFRGDNGNMQWKNGGVYYAAPPFYNGGYGYPAAAPFPDPGMYAAPAYGAYPFYGNQ 420
Query: 406 QQ 407
QQ
Sbjct: 421 QQ 422
>gi|388505308|gb|AFK40720.1| unknown [Medicago truncatula]
Length = 454
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/304 (62%), Positives = 228/304 (75%), Gaps = 17/304 (5%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P EIRT+W+GDL +WMDET+L+ CFAHTGEV + KVIRNKQTGQ EGYGF+EF +RA AE
Sbjct: 112 PEEIRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAE 171
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASF----GAGEKR--DDTPDHTIFVGDLAADVTDYMLQ 191
+VLQ FNGT MPN +Q FRLNWA+F G GE+R + T D ++FVGDLA DVTD MLQ
Sbjct: 172 KVLQNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQ 231
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETF +++ S KGAKVVID TGR+KGYGFVRFGDESE+ RAMTEMNGV+CS+RPMR+G A
Sbjct: 232 ETFASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVA 291
Query: 252 TNKKTVSGQQQYPK--------ASYQNSQVA---QSDDDPNNTTVFVGNLDSIVTDEHLR 300
T KKT QQY + N +A QS+ D NNTT+FVG LDS ++DE LR
Sbjct: 292 TPKKTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDEDLR 351
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
+ F Q+G ++ VKIP GK CGFVQ ADR AEEA++ LNGT +G Q +RLSWGRSP NK
Sbjct: 352 QPFLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKH 411
Query: 361 AQPD 364
+ D
Sbjct: 412 WRND 415
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
gi|222850248|gb|EEE87795.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/306 (62%), Positives = 235/306 (76%), Gaps = 13/306 (4%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
G E +T+W+GDL +WMDETYL+ CF+HTGEV +VK+IRNKQTGQ+EGYGF+EF S A
Sbjct: 74 GSNEEAKTVWVGDLLHWMDETYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSHAA 133
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETF 194
AE+VLQ+++G+ MPN +Q FRLNWASF AGE+R D D +IFVGDLAADVTD MLQETF
Sbjct: 134 AEKVLQSYSGSMMPNTDQPFRLNWASF-AGERRADAGSDLSIFVGDLAADVTDAMLQETF 192
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+Y S KGAKVV D TGR+KGYGFVRFGDE+E+ RA+TEMNG +CS+RPMRIG AT K
Sbjct: 193 ATKYASVKGAKVVADSNTGRSKGYGFVRFGDENEKTRAITEMNGAYCSSRPMRIGVATPK 252
Query: 255 KTVSGQQQYPKASY----------QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
K + QQQY + +Q +QSD D NNTT+FVG +DS VTDE LR+ FS
Sbjct: 253 KPSAYQQQYSSQALVLAGGHASNGTMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQPFS 312
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 364
Q+G++V VK+P GK C FVQFA+R AE+AL+ LNGT +G Q +RLSWGR+P+NKQ + D
Sbjct: 313 QFGEVVSVKMPTGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTPANKQWRGD 372
Query: 365 P-NQWN 369
NQW+
Sbjct: 373 HGNQWH 378
>gi|357454295|ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein [Medicago truncatula]
Length = 428
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/341 (59%), Positives = 243/341 (71%), Gaps = 29/341 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE YL CF+HTGEV+++K+IRNK TGQ EGYGFIEF+S + AERV
Sbjct: 13 EVRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERV 72
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQT+NGT MP EQ FRLNWASFG GE+R D PDH+IFVGDLA DVTDY+LQETFR Y
Sbjct: 73 LQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRTHY 132
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S +GAKVV D TGR+KGYGFV+F DESE+ RAM+EMNGV+CSTRPMRI AT KKT
Sbjct: 133 GSVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRISAATPKKTTG 192
Query: 259 GQQQ---------------YPKASYQNSQVAQS--DDDPNNTTVFVGNLDSIVTDEHLRE 301
QQ YP +Y + V + D NNTT++VGNLD V++E L++
Sbjct: 193 YQQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTVPPEYDVNNTTIYVGNLDLNVSEEELKQ 252
Query: 302 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
F Q+G++V VK+ GK CGFVQF R+ AEEA++ + G LG Q IR+SWGR + +Q
Sbjct: 253 NFLQFGEIVSVKVHPGKACGFVQFGARASAEEAIQKMQGKILGQQVIRVSWGRPQTARQD 312
Query: 362 QP-------DPNQWNAGYYGYAQ-GYENYGYAAAAPQDPSM 394
P D +QW+A YYGY Q GYE Y Y AA QDPSM
Sbjct: 313 VPGGWGQQVDQSQWSA-YYGYGQPGYEAYAYGAA--QDPSM 350
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
gi|297340039|gb|EFH70456.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
Length = 450
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/324 (60%), Positives = 238/324 (73%), Gaps = 14/324 (4%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+++TLW+GDL +WMDETYL+TCF+HT EV +VKVIRNKQT Q EGYGF+EF+SR+ AE
Sbjct: 122 DVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEA 181
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRAR 197
LQ+F+G MPN EQ FRLNWASF GEKR ++ PD +IFVGDLA DV+D +L ETF R
Sbjct: 182 LQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGR 241
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
YPS KGAKVVID TGR+KGYGFVRFGDE+E+ RAMTEMNG FCS+R MR+G AT K+
Sbjct: 242 YPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAA 301
Query: 258 S-----GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 312
+ G Q A + SD + NN+T+FVG LD+ VT+E L + FSQ+G++V V
Sbjct: 302 AYGQQNGSQALTLAGGHGGNGSLSDGESNNSTIFVGGLDADVTEEDLMQPFSQFGEVVSV 361
Query: 313 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAG 371
KIP GK CGFVQFA+R AEEA+ LNGT +G +RLSWGRSP NKQ + D NQWN G
Sbjct: 362 KIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQWRSDTGNQWNGG 420
Query: 372 YYGYAQGYENYGYAAAAPQDPSMY 395
Y QGY N GY A QD +MY
Sbjct: 421 -YSRGQGYNN-GY---ANQDSNMY 439
>gi|356541995|ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/331 (59%), Positives = 243/331 (73%), Gaps = 25/331 (7%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE+YL+ CFAH+GEVV++K+IRNK TGQ EGYGF+EF+S A AE
Sbjct: 8 EVRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAF 67
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
L+TFNG MP +Q FRLNWASFG D PDH+IFVGDLA DVTD++LQETFRA YP
Sbjct: 68 LRTFNGAQMPGTDQTFRLNWASFG-----DSGPDHSIFVGDLAPDVTDFILQETFRAHYP 122
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KG+KVV D TGR+KGYGFV+F DE+++ RAMTEMNGV+CSTRPMRI AT KK S
Sbjct: 123 SVKGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 260 QQQY--PKASYQ-------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
Q QY PKA YQ S VA ++D NNTTV +GNLD VT+E L++ F Q+G +V
Sbjct: 183 QHQYAPPKAMYQFPAYTAPVSTVA-PENDVNNTTVCIGNLDLNVTEEELKQAFVQFGDIV 241
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ-------AQP 363
VKI AGK G+VQF R+ AE+A++ + G +G Q I++SWG + + +Q AQ
Sbjct: 242 LVKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIGQQVIQISWGSTLTARQDVPGGWGAQM 301
Query: 364 DPNQWNAGYYGYAQGYENYGYAAAAPQDPSM 394
DP+QW+A YYGY QGYE+Y Y A DPS+
Sbjct: 302 DPSQWSA-YYGYGQGYESYAYGAT--HDPSL 329
>gi|356541997|ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 241/324 (74%), Gaps = 20/324 (6%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE+YL+ CFAH+GEVV++K+IRNK TGQ EGYGF+EF+S A AE
Sbjct: 8 EVRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAF 67
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
L+TFNG MP +Q FRLNWASFG D PDH+IFVGDLA DVTD++LQETFRA YP
Sbjct: 68 LRTFNGAQMPGTDQTFRLNWASFG-----DSGPDHSIFVGDLAPDVTDFILQETFRAHYP 122
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KG+KVV D TGR+KGYGFV+F DE+++ RAMTEMNGV+CSTRPMRI AT KK S
Sbjct: 123 SVKGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 260 QQQY--PKASYQ-------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
Q QY PKA YQ S VA ++D NNTTV +GNLD VT+E L++ F Q+G +V
Sbjct: 183 QHQYAPPKAMYQFPAYTAPVSTVA-PENDVNNTTVCIGNLDLNVTEEELKQAFVQFGDIV 241
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNA 370
VKI AGK G+VQF R+ AE+A++ + G +G Q I++SWG + + +Q DP+QW+A
Sbjct: 242 LVKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIGQQVIQISWGSTLTARQM--DPSQWSA 299
Query: 371 GYYGYAQGYENYGYAAAAPQDPSM 394
YYGY QGYE+Y Y A DPS+
Sbjct: 300 -YYGYGQGYESYAYGAT--HDPSL 320
>gi|449455232|ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 436
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/309 (62%), Positives = 231/309 (74%), Gaps = 12/309 (3%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P++QG E++TLWIGDLQ WMDETYLN CFAHTGEV +VKVI NKQTGQ EGYGF+EF
Sbjct: 90 PRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFF 149
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYML 190
S AE+VLQ +NGT MPN E FRLNWA+F A ++R DT D +IFVGDLAADVTD +L
Sbjct: 150 SHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAIL 209
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
QETF +RY S KGAKVVID +G +KGYGF RFGDE+E+ RAMTEMNG++CS+RPMRIG
Sbjct: 210 QETFSSRYTSVKGAKVVIDSNSGPSKGYGF-RFGDENERTRAMTEMNGIYCSSRPMRIGV 268
Query: 251 ATNKKTVSGQQQYPKASY---------QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 301
AT KK QQ Y + Q +QSD + NNTT+FVG LDS V+DE L++
Sbjct: 269 ATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKQ 328
Query: 302 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
FS++G +V VKIP GK CGFVQFA+R AE+A++ LNGT +G Q +RLSWGRS NKQ
Sbjct: 329 AFSKFGDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQW 388
Query: 362 QPDP-NQWN 369
+ D NQWN
Sbjct: 389 RGDSNNQWN 397
>gi|449470045|ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449496017|ref|XP_004160013.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 429
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 225/420 (53%), Positives = 278/420 (66%), Gaps = 28/420 (6%)
Query: 13 PPPMAAHQYQYQQQAPPQQQPPPQ-------PSPYMMM----MPPQPQAQPPA---MWAT 58
P AAHQ + QQ +QP PQ P+ M+M MPPQ PP+ +
Sbjct: 10 PQQQAAHQTEQNQQT--HKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPPSPHYIPYR 67
Query: 59 QAAAP-QAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK 117
Q P Q G QG E +T+W+GDLQ+WMDE YL++CFA TGE+ ++KVIRNK
Sbjct: 68 QYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGEISSLKVIRNK 127
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTI 176
QTG EGYGF+EF S AE+VLQ ++ MPN EQ FRLNWA+F G+KR + D +I
Sbjct: 128 QTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGSDLSI 187
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
FVGDLAADVTD +L ETF ++Y S K AKVV D TG +KGYGFVRFGD++E+ +AMTEM
Sbjct: 188 FVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEM 247
Query: 237 NGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQN----SQVAQSDDDPNNTTVFVGNLDS 292
NG++CS+RPMRIG AT KK+ QQQY Y + S QSD D NTT+F+G LD
Sbjct: 248 NGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIGGLDP 307
Query: 293 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352
VTDE L++LFSQ+G++V VKIP GK CGF+QFA+R AEEAL+ LNGT +G Q +RLSW
Sbjct: 308 NVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTVRLSW 367
Query: 353 GRSPSNKQAQPD-PNQWNAGYYGYAQGYENYGYAAAAPQD-PSMY---YGGYPGYGNYQQ 407
GRSP+NKQ + D N W+ Y Q Y YGYA P D P+MY YG YP YG +QQ
Sbjct: 368 GRSPTNKQYRGDYGNHWSGA-YYGGQVYGGYGYALPLPYDPPTMYAAAYGAYPMYGTHQQ 426
>gi|50725189|dbj|BAD33940.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|51535291|dbj|BAD38554.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 316
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/321 (61%), Positives = 235/321 (73%), Gaps = 13/321 (4%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
MDE YL++CF +TGEVVA+KVIRNKQTGQ EGYGF+EF S A AE+VL+ F G MPN +
Sbjct: 1 MDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIMPNTD 60
Query: 153 QNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
Q FR+NWASF G++R D DH+IFVGDLA+DV D L ETF RY S KGAKVVID
Sbjct: 61 QPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDAN 120
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNS 271
TGR+KGYGFVRFGD++E+ AMTEMNGV+CSTRPMRIGPAT +KT SG P S
Sbjct: 121 TGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKT-SGTSG-PTGS---- 174
Query: 272 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 331
A+SD D NTTVFVG LD V+++ LR+ FSQYG++ VKIP GK+CGFVQF R A
Sbjct: 175 -AARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNA 233
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAG-YYGYAQGYENYGYAAAAP 389
E+AL+ LNG+ +G Q +RLSWGR+P+NKQ + D +QWN G YY + Y YGY A P
Sbjct: 234 EDALQGLNGSTIGKQTVRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFYSGYGYPAPFP 293
Query: 390 QDPSMY---YGGYPGYGNYQQ 407
DP MY YG YP YGN QQ
Sbjct: 294 ADPGMYAAAYGAYPFYGNQQQ 314
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L F+ GE+ +VK+ KQ GF++F+ R AE LQ
Sbjct: 186 TVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQC------GFVQFVQRKNAEDALQG 239
Query: 143 FNGTPMPNGEQNFRLNW 159
NG+ + G+Q RL+W
Sbjct: 240 LNGSTI--GKQTVRLSW 254
>gi|145334517|ref|NP_001078604.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005307|gb|AED92690.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 421
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 237/344 (68%), Gaps = 18/344 (5%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE YL +CF+ TGE+V+VKVIRNK TGQ EGYGFIEFIS A AER
Sbjct: 22 EVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERT 81
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NGT MP E FRLNWASFG+G+K D PDH+IFVGDLA DVTDY+LQETFR Y
Sbjct: 82 LQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYS 141
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S +GAKVV D TGR+KGYGFV+F +ESE+ RAM EMNG++CSTRPMRI AT KK V
Sbjct: 142 SVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGV 201
Query: 260 QQQY------PKASYQNSQ--VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 311
QQQY P A Q VA + D TT+ V NLD VT+E L++ FSQ G++++
Sbjct: 202 QQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIY 261
Query: 312 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK--QAQPDPNQWN 369
VKIPA K G+VQF R AEEA++ + G +G Q +R+SW ++P Q DPNQWN
Sbjct: 262 VKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQDGWVTQADPNQWN 321
Query: 370 AGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQPQQ 413
Y G YA A QDPS+Y YG Y PQ PQQ
Sbjct: 322 G---YYGYGQGYDAYAYGATQDPSVY-----AYGGYGYPQYPQQ 357
>gi|15239715|ref|NP_197436.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331115|sp|Q8VXZ9.1|R47BP_ARATH RecName: Full=Polyadenylate-binding protein RBP47B';
Short=Poly(A)-binding protein RBP47B'; AltName:
Full=RNA-binding protein 47B'; Short=AtRBP47B prime;
Short=AtRBP47B'
gi|18377731|gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|21281189|gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|332005306|gb|AED92689.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 425
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/348 (57%), Positives = 238/348 (68%), Gaps = 22/348 (6%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE YL +CF+ TGE+V+VKVIRNK TGQ EGYGFIEFIS A AER
Sbjct: 22 EVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERT 81
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NGT MP E FRLNWASFG+G+K D PDH+IFVGDLA DVTDY+LQETFR Y
Sbjct: 82 LQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYS 141
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S +GAKVV D TGR+KGYGFV+F +ESE+ RAM EMNG++CSTRPMRI AT KK V
Sbjct: 142 SVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGV 201
Query: 260 QQQY-PKASY-----------QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 307
QQQY KA Y + VA + D TT+ V NLD VT+E L++ FSQ G
Sbjct: 202 QQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLG 261
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK--QAQPDP 365
++++VKIPA K G+VQF R AEEA++ + G +G Q +R+SW ++P Q DP
Sbjct: 262 EVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQDGWVTQADP 321
Query: 366 NQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQPQQ 413
NQWN Y G YA A QDPS+Y YG Y PQ PQQ
Sbjct: 322 NQWNG---YYGYGQGYDAYAYGATQDPSVY-----AYGGYGYPQYPQQ 361
>gi|194697962|gb|ACF83065.1| unknown [Zea mays]
gi|414885795|tpg|DAA61809.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 320
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/325 (61%), Positives = 238/325 (73%), Gaps = 17/325 (5%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
MDE YL++CF +TGEVVA+KVIRNKQTGQ EGYGF+EF S A AE+VL+ F+G MPN +
Sbjct: 1 MDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFSGHIMPNTD 60
Query: 153 QNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
Q FRLNWASF G++R D+ DH+IFVGDLA+DV D L E F +RY S KGAKVVID
Sbjct: 61 QPFRLNWASFSMGDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDAN 120
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNS 271
TGR+KGYGFVRFGD+SE+ +AMTEMNGV+CS+RPMRIGPAT +K+ A
Sbjct: 121 TGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSA----- 175
Query: 272 QVAQSD-DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSC 330
A+SD D NTTVFVG LD V++E LR+ FSQYG++ VKIP GK+CGFVQFA R
Sbjct: 176 --ARSDGGDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKN 233
Query: 331 AEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAG--YYGYAQGYENYGYAAA 387
AE+AL+ LNG+ +G QN+RLSWGR+P+NKQ + D NQWN G YY Y YGY AA
Sbjct: 234 AEDALQGLNGSTIGKQNVRLSWGRNPANKQFRGDNGNQWNNGGMYYAAPPFYNGYGYPAA 293
Query: 388 APQ-DPSMY----YGGYPGYGNYQQ 407
AP DP MY YG YP YGN QQ
Sbjct: 294 APFPDPGMYAAPAYGAYPFYGNQQQ 318
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L F+ GE+ +VK+ KQ GF++F R AE LQ
Sbjct: 187 TVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQC------GFVQFAQRKNAEDALQG 240
Query: 143 FNGTPMPNGEQNFRLNW 159
NG+ + G+QN RL+W
Sbjct: 241 LNGSTI--GKQNVRLSW 255
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
gi|122246579|sp|Q0WW84.1|RB47B_ARATH RecName: Full=Polyadenylate-binding protein RBP47B;
Short=Poly(A)-binding protein RBP47B; AltName:
Full=RNA-binding protein 47B; Short=AtRBP47B
gi|110741040|dbj|BAE98614.1| putative nuclear acid binding protein [Arabidopsis thaliana]
gi|111074446|gb|ABH04596.1| At3g19130 [Arabidopsis thaliana]
gi|332642675|gb|AEE76196.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/311 (58%), Positives = 229/311 (73%), Gaps = 14/311 (4%)
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRA 134
+G +++TLW+GDL +WMDETYL++CF+HTGEV +VKVIRNK T Q EGYGF+EF+SRA
Sbjct: 101 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 160
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQE 192
AE VLQ ++G+ MPN +Q FR+NWASF GEKR ++ PD ++FVGDL+ DVTD +L E
Sbjct: 161 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 220
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
TF RYPS K AKVVID TGR+KGYGFVRFGDE+E+ RA+TEMNG +CS R MR+G AT
Sbjct: 221 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT 280
Query: 253 NKKTVSGQQQYPKASY-------QNSQV---AQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
K+ ++ QQQ+ + N + +QSD + N T+FVG +D V DE LR+
Sbjct: 281 PKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQP 340
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
FSQ+G++V VKIP GK CGFVQFADR AE+A+ LNGT +G +RLSWGRSP NKQ +
Sbjct: 341 FSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWR 399
Query: 363 PDPN-QWNAGY 372
D QWN GY
Sbjct: 400 GDSGQQWNGGY 410
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
gi|75337808|sp|Q9SX80.1|R47CP_ARATH RecName: Full=Polyadenylate-binding protein RBP47C';
Short=Poly(A)-binding protein RBP47C'; AltName:
Full=RNA-binding protein 47C'; Short=AtRBP47C prime;
Short=AtRBP47C'
gi|5668811|gb|AAD46037.1|AC007519_22 Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424
comes from this gene [Arabidopsis thaliana]
gi|110743035|dbj|BAE99410.1| hypothetical protein [Arabidopsis thaliana]
gi|124301030|gb|ABN04767.1| At1g47500 [Arabidopsis thaliana]
gi|332194057|gb|AEE32178.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/345 (57%), Positives = 241/345 (69%), Gaps = 17/345 (4%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCF--AHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
Q GE +T+W+GDLQ WMDE YLN+ F A E+V++KVIRNK G EGYGF+EF
Sbjct: 94 HQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEF 153
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDY 188
S A++VLQ FNG PMPN +Q FRLNWASF GEKR ++ PD +IFVGDLA DV+D
Sbjct: 154 ESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDA 213
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
+L ETF +YPS K AKVV+D TGR+KGYGFVRFGDE+E+ +AMTEMNGV CS+R MRI
Sbjct: 214 LLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRI 273
Query: 249 GPATNKKTVSGQQQ---YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQ 305
GPAT +KT QQQ P ++ +S+ D NTT+FVG LDS VTDE L++ FS+
Sbjct: 274 GPATPRKTNGYQQQGGYMPSGAF-----TRSEGDTINTTIFVGGLDSSVTDEDLKQPFSE 328
Query: 306 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD- 364
+G++V VKIP GK CGFVQF +R AEEAL LNGT +G Q +RLSWGR+P+NKQ +
Sbjct: 329 FGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKY 388
Query: 365 PNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG--YPGYGNYQQ 407
NQW YYG Q Y YGY P DP MY YP YG +QQ
Sbjct: 389 GNQWVDPYYG-GQFYNGYGYMVPQP-DPRMYPAAPYYPMYGGHQQ 431
>gi|242073268|ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
gi|241937753|gb|EES10898.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
Length = 423
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/332 (56%), Positives = 240/332 (72%), Gaps = 15/332 (4%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +T+W+GDLQYWMDE YL++CF +GEVV +KVIRN+QTGQ EGYGF+EF S A AE+
Sbjct: 99 ENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKA 158
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ F G MPN ++ F+LNWAS+ GEKR + DH+IFVGDLAADVTD ML E F ++Y
Sbjct: 159 LQNFTGHVMPNTDRAFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKY 218
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKV+ID TGR++GYGFVRFGD++++ AM+EMNGV+CSTRP+RIGPAT +++
Sbjct: 219 RSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGPATPRRSSG 278
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
SD D +N TV+VG LD V+++ LR+ F++YG L VKIP GK
Sbjct: 279 DSGSSTP--------GHSDGDSSNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPLGK 330
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQ 377
+CGFVQFA R+ AEEAL+ LNG+ +G Q +RLSWGRSPS+KQ++ D N+ N YYG
Sbjct: 331 QCGFVQFASRTDAEEALQGLNGSLIGKQAVRLSWGRSPSHKQSRGDSGNRRNNMYYG-TP 389
Query: 378 GYENYGYAAAAPQDPSMY---YGGYPGYGNYQ 406
Y YGYA+ P P+MY YG YP YGN Q
Sbjct: 390 FYGGYGYASPVPH-PNMYAAAYGAYPMYGNQQ 420
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis thaliana]
Length = 392
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/311 (58%), Positives = 229/311 (73%), Gaps = 14/311 (4%)
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRA 134
+G +++TLW+GDL +WMDETYL++CF+HTGEV +VKVIRNK T Q EGYGF+EF+SRA
Sbjct: 58 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 117
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQE 192
AE VLQ ++G+ MPN +Q FR+NWASF GEKR ++ PD ++FVGDL+ DVTD +L E
Sbjct: 118 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 177
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
TF RYPS K AKVVID TGR+KGYGFVRFGDE+E+ RA+TEMNG +CS R MR+G AT
Sbjct: 178 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT 237
Query: 253 NKKTVSGQQQYPKASY-------QNSQV---AQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
K+ ++ QQQ+ + N + +QSD + N T+FVG +D V DE LR+
Sbjct: 238 PKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQP 297
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
FSQ+G++V VKIP GK CGFVQFADR AE+A+ LNGT +G +RLSWGRSP NKQ +
Sbjct: 298 FSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWR 356
Query: 363 PDPN-QWNAGY 372
D QWN GY
Sbjct: 357 GDSGQQWNGGY 367
>gi|302795494|ref|XP_002979510.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
gi|300152758|gb|EFJ19399.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
Length = 432
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/317 (60%), Positives = 225/317 (70%), Gaps = 26/317 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE YL FAHTGEV++ KVIRNKQTG EGYGFIEF S AERV
Sbjct: 26 EVRTLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERV 85
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
L +NGT MP EQ FRLNWASFG GEKR D P+ +IFVGDLA DVTDYML ETFR R+
Sbjct: 86 LLAYNGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRF 145
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK--- 255
PS +GAKVVID +TGR+KGYGFVRF DE+E+ RAM+EMNGV+CS+RPMRI AT KK
Sbjct: 146 PSVRGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRISAATPKKAMA 205
Query: 256 ----TVSGQQQYPKASYQN-----------SQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
TV+ P+ + + SQV D DP NTT+FVG LD +T+E ++
Sbjct: 206 AGLTTVTAATIVPQPTIASPITPPPSLSIQSQVLPPDSDPTNTTIFVGGLDLNITEEEVK 265
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP-SNK 359
+ FS G+LV VKIP GK C FVQ+A R+ AE+AL+ L+GT +G Q IRLSWGRSP S K
Sbjct: 266 QTFSHIGELVSVKIPPGKGCAFVQYAQRNSAEDALQRLHGTVIGQQAIRLSWGRSPTSTK 325
Query: 360 QAQPDP------NQWNA 370
QA P QWN+
Sbjct: 326 QAPTSPWRDAAQTQWNS 342
>gi|297807995|ref|XP_002871881.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
gi|297317718|gb|EFH48140.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/365 (55%), Positives = 241/365 (66%), Gaps = 30/365 (8%)
Query: 71 PPQQQGQ------PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG 124
PPQ QG E+RTLWIGDLQYW+DE YL +CF+ TGE+V+VKVIRNK TGQ EG
Sbjct: 6 PPQPQGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEG 65
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
YGFIEFIS A AER LQT+NGT MP E FRLNWASFG+G+K D PDH+IFVGDLA D
Sbjct: 66 YGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPD 125
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
VTDY+LQETFR Y S +GAKVV D TGR+KGYGFV+F +ESE+ RAM EMNG++CSTR
Sbjct: 126 VTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTR 185
Query: 245 PMRIGPATNKKTVSGQQQY------------PKASY--QNSQVAQSDDDPNNTTVFVGNL 290
PMRI AT KK V QQQY P +Y Q Q + D TT+ + NL
Sbjct: 186 PMRISAATPKKNVGVQQQYVTKGPVPSAVAAPVQAYIAQPGQGLPPESDVTCTTISIANL 245
Query: 291 DSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 350
D VT+E L++ FSQ G++++VKIPA K G+VQF R AEEA++ + G +G Q +R+
Sbjct: 246 DPNVTEEELKKAFSQLGEIIYVKIPATKGYGYVQFKTRPSAEEAVQKMQGQVIGQQAVRI 305
Query: 351 SWGRSPSNK--QAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQP 408
SW ++P AQ DPNQWN Y G Y QDPS+Y YG Y P
Sbjct: 306 SWSKNPGQDGWVAQADPNQWNG---YYGYGQGYDAYGYGTTQDPSLY-----AYGGYGYP 357
Query: 409 QQPQQ 413
Q PQQ
Sbjct: 358 QYPQQ 362
>gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|75337807|sp|Q9SX79.1|RB47C_ARATH RecName: Full=Polyadenylate-binding protein RBP47C;
Short=Poly(A)-binding protein RBP47C; AltName:
Full=RNA-binding protein 47C; Short=AtRBP47C
gi|5668812|gb|AAD46038.1|AC007519_23 Contains 3 PF|00076 RNA recognition motif domains. ESTs gb|R30092,
gb|R30093, gb|AA394338, gb|N65719 and gb|AA597577 come
from this gene [Arabidopsis thaliana]
gi|12744993|gb|AAK06876.1|AF344325_1 putative DNA binding protein [Arabidopsis thaliana]
gi|14334552|gb|AAK59684.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17065624|gb|AAL33806.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332194053|gb|AEE32174.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 432
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/336 (57%), Positives = 238/336 (70%), Gaps = 11/336 (3%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGE--VVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
GE +T+W+GDL +WMDE YLN+ FA E +V+VKVIRNK G EGYGF+EF S A
Sbjct: 98 GENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVA 157
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETF 194
++VL+ FNGT MPN +Q FRLNWASF GEKR ++ PD +IFVGDL+ DV+D +L ETF
Sbjct: 158 DKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETF 217
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+YPS K AKVV+D TGR+KGYGFVRFGDE+E+ +AMTEMNGV CS+R MRIGPAT +
Sbjct: 218 SEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 277
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
KT QQQ N + + + D NTT+FVG LDS VTDE L++ F+++G++V VKI
Sbjct: 278 KTNGYQQQ--GGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKI 335
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNAGYY 373
P GK CGFVQF +R AEEAL LNGT +G Q +RLSWGR+P+NKQ + NQW YY
Sbjct: 336 PVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYY 395
Query: 374 GYAQGYENYGYAAAAPQDPSMYYGG--YPGYGNYQQ 407
G Q Y YGY P DP MY YP YG +QQ
Sbjct: 396 G-GQFYNGYGYMVPQP-DPRMYPAAPYYPMYGGHQQ 429
>gi|302792090|ref|XP_002977811.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
gi|300154514|gb|EFJ21149.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
Length = 455
Score = 367 bits (942), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 193/335 (57%), Positives = 226/335 (67%), Gaps = 44/335 (13%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE YL FAHTGEV++ KVIRNKQTG EGYGFIEF S AERV
Sbjct: 26 EVRTLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERV 85
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
L +NGT MP EQ FRLNWASFG GEKR D P+ +IFVGDLA DVTDYML ETFR R+
Sbjct: 86 LLAYNGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRF 145
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK--- 255
PS +GAKVVID +TGR+KGYGFVRF DE+E+ RAM+EMNGV+CS+RPMRI AT KK
Sbjct: 146 PSVRGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRISAATPKKAMA 205
Query: 256 ----TVSGQQQYPKASYQN-----------------------------SQVAQSDDDPNN 282
TV+ P+ + + SQV D DP N
Sbjct: 206 AGLTTVTAATIVPQPTIASPFKAATTTTTPTYQTMPYSITPPPSLSIQSQVLPPDSDPTN 265
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ 342
TT+FVG LD +T+E +++ FSQ G+LV VKIP GK C FVQ+A R+ AE+AL+ L+GT
Sbjct: 266 TTIFVGGLDLNITEEEVKQTFSQIGELVSVKIPPGKGCAFVQYAQRNSAEDALQRLHGTV 325
Query: 343 LGGQNIRLSWGRSP-SNKQAQPDP------NQWNA 370
+G Q IRLSWGRSP S KQA P QWN+
Sbjct: 326 IGQQAIRLSWGRSPTSTKQAPTSPWGDAAQTQWNS 360
>gi|212722984|ref|NP_001132004.1| uncharacterized protein LOC100193409 [Zea mays]
gi|194693170|gb|ACF80669.1| unknown [Zea mays]
Length = 422
Score = 367 bits (942), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 184/305 (60%), Positives = 224/305 (73%), Gaps = 10/305 (3%)
Query: 59 QAAAPQAAGV--AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
Q AAP A V + P Q GQ E +T+W+GDL +WMDE YL+ CF +TGEVVA+KVIRN
Sbjct: 68 QLAAPVPAVVLGSPAPHQAGQE-ENKTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRN 126
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHT 175
KQTGQ EGYGF+EF S A AERVL+ F+G MPN +Q FRLNWASF G++R D DH+
Sbjct: 127 KQTGQSEGYGFVEFYSHAAAERVLEGFSGHIMPNTDQPFRLNWASFSMGDRRSDVASDHS 186
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
IFVGDLA+DV D L E F +RY S KGAKVVID TGR+KGYGFVRFGD+SE+ AMTE
Sbjct: 187 IFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTE 246
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 295
MNGV+CS+RPMRIGPAT +K+ ++ + D NTTVFVG LD V+
Sbjct: 247 MNGVYCSSRPMRIGPATPRKSSGTSGSNGSSARPDG------GDLTNTTVFVGGLDPDVS 300
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
+E LR+ FSQYG++ VKIP GK+CGFVQFA R AE+AL+ LNG+ +G Q +RLSWGR+
Sbjct: 301 EEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGSTIGKQAVRLSWGRN 360
Query: 356 PSNKQ 360
P+NKQ
Sbjct: 361 PANKQ 365
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 175/298 (58%), Positives = 222/298 (74%), Gaps = 13/298 (4%)
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRA 134
+G +++TLW+GDL +WMDETYL++CF+HTGEV +VKVIRNK T Q EGYGF+EF+SRA
Sbjct: 101 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 160
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQE 192
AE VLQ ++G+ MPN +Q FR+NWASF GEKR ++ PD ++FVGDL+ DVTD +L E
Sbjct: 161 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 220
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
TF RYPS K AKVVID TGR+KGYGFVRFGDE+E+ RA+TEMNG +CS R MR+G AT
Sbjct: 221 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT 280
Query: 253 NKKTVSGQQQYPKASY-------QNSQV---AQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
K+ ++ QQQ+ + N + +QSD + N T+FVG +D V DE LR+
Sbjct: 281 PKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQP 340
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
FSQ+G++V VKIP GK CGFVQFADR AE+A+ LNGT +G +RLSWGRSP NKQ
Sbjct: 341 FSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQ 397
>gi|357149687|ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 421
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 231/329 (70%), Gaps = 13/329 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+W+GDLQYWMDE YL++CF +GEVV +KVIRN+ +G EGYGF+EF S A AE+ LQ
Sbjct: 99 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 158
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARYPS 200
F G MPN ++ F+LNWAS+ GEKR + DH+IFVGDLA DVTD ML E F +Y S
Sbjct: 159 NFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 218
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
KGAKV+ID TGR++GYGFVRFGD++++ AMTEMNGV+CSTRP+RIGPAT ++T
Sbjct: 219 VKGAKVIIDANTGRSRGYGFVRFGDDNDRTHAMTEMNGVYCSTRPIRIGPATPRRTSGDS 278
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 320
P QSD D N TV+VG LD V+++ LR+ F++YG + VKIP GK+C
Sbjct: 279 GSSPP--------RQSDGDLTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC 330
Query: 321 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYE 380
GFVQF +R+ AEEAL+ L+G+ +G Q +RLSWGRSP++KQ + D G Y Y
Sbjct: 331 GFVQFVNRADAEEALQALSGSTIGKQAVRLSWGRSPASKQPRGDSGHRRNGMYYGTPFYG 390
Query: 381 NYGYAAAAPQDPSMY---YGGYPGYGNYQ 406
YGYA+ P P+MY YG YP YGN Q
Sbjct: 391 GYGYASPVPH-PNMYAAAYGAYPFYGNQQ 418
>gi|15594035|emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 240/338 (71%), Gaps = 13/338 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+W+GDL WMDE YL CFA T EV ++KVIRNKQTG EGYGF+EF + A AE+VLQ
Sbjct: 117 RTIWVGDLLNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVEFFTHAAAEKVLQ 176
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
T++ MPN +Q FRLNWA+F G+KR ++ D +IFVGDLAADVTD +L ETF +YPS
Sbjct: 177 TYSCMTMPNVDQPFRLNWATFSMGDKRANNGSDLSIFVGDLAADVTDTLLHETFATKYPS 236
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
K AKVV D TGR+KGYGFVRFGD++E+ +AMTEMNGV+CS+RPMRIG AT +K+ Q
Sbjct: 237 VKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQ 296
Query: 261 QQY-PKASYQN---SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 316
QQY + Y N +Q +Q D D NTT+FVG LD V+DE LR+ F QYG++V VKIP
Sbjct: 297 QQYSSQGGYSNGGPAQGSQPDADSTNTTIFVGGLDPNVSDEDLRQPFVQYGEIVSVKIPV 356
Query: 317 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNAGYYGY 375
+R QFA+R+ AEEAL+ LNGT +G Q +RL WGR+P+NKQ++ D NQW YYG
Sbjct: 357 EERVWVWQFANRNDAEEALQKLNGTFIGKQTVRLFWGRNPANKQSRGDFGNQWTGPYYG- 415
Query: 376 AQGYENYGYAAAAPQDPSM------YYGGYPGYGNYQQ 407
Y+ YGYA DP M YG YP YG +QQ
Sbjct: 416 GHFYDGYGYAFPPQHDPGMYAAAAAAYGAYPIYGTHQQ 453
>gi|357163840|ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 428
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 180/317 (56%), Positives = 232/317 (73%), Gaps = 12/317 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +T+W+GDLQYWMDE YL++CF +GEVV +KVIRN+QTGQ EGYGF+EF S A A++
Sbjct: 102 ENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQTEGYGFVEFYSHASADKA 161
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARY 198
LQ F G MPN ++ F+LNWAS+ GEKR + DH+IFVGDLAADVTD ML E F ++Y
Sbjct: 162 LQNFTGHAMPNTDRPFKLNWASYSMGEKRSEVVSDHSIFVGDLAADVTDEMLMELFASKY 221
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKV+ID TGR++GYGFVRFG++S++ RAMTEMNGV+CSTRP+RIGPAT ++T
Sbjct: 222 RSVKGAKVIIDANTGRSRGYGFVRFGEDSDKSRAMTEMNGVYCSTRPIRIGPATPRRTA- 280
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
+S SD D N TV+VG LD V+++ LR+ F++YG + VKIP GK
Sbjct: 281 -------GDSGSSTPGHSDGDSTNRTVYVGGLDPNVSEDELRKSFAKYGDVASVKIPQGK 333
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQ 377
+CGFVQ+ +R+ AEEAL+ LNG+ +G Q +RLSWGRSPS+KQ + D N+ N YYG
Sbjct: 334 QCGFVQYVNRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQPRGDSGNRRNNMYYG-TP 392
Query: 378 GYENYGYAAAAPQDPSM 394
Y YGYA+ P P+M
Sbjct: 393 FYGGYGYASPVPH-PNM 408
>gi|219888851|gb|ACL54800.1| unknown [Zea mays]
gi|414589690|tpg|DAA40261.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 322
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 195/326 (59%), Positives = 232/326 (71%), Gaps = 17/326 (5%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
MDE YL+ CF +TGEVVA+KVIRNKQTGQ EGYGF+EF S A AERVL+ F+G MPN +
Sbjct: 1 MDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAERVLEGFSGHIMPNTD 60
Query: 153 QNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
Q FRLNWASF G++R D DH+IFVGDLA+DV D L E F +RY S KGAKVVID
Sbjct: 61 QPFRLNWASFSMGDRRSDVASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDAN 120
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNS 271
TGR+KGYGFVRFGD+SE+ AMTEMNGV+CS+RPMRIGPAT +K+ ++ +
Sbjct: 121 TGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSARPDG 180
Query: 272 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 331
D NTTVFVG LD V++E LR+ FSQYG++ VKIP GK+CGFVQFA R A
Sbjct: 181 ------GDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNA 234
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPN--QW-NAGYYGYAQGYEN--YGYAA 386
E+AL+ LNG+ +G Q +RLSWGR+P+NKQ + D QW N G Y A + N YGY A
Sbjct: 235 EDALQGLNGSTIGKQAVRLSWGRNPANKQFRGDNGNMQWKNGGVYYAAPPFYNGGYGYPA 294
Query: 387 AAPQ-DPSMY----YGGYPGYGNYQQ 407
AAP DP MY YG YP YGN QQ
Sbjct: 295 AAPFPDPGMYAAPAYGAYPFYGNQQQ 320
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L F+ GE+ +VK+ KQ GF++F R AE LQ
Sbjct: 187 TVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQC------GFVQFAQRKNAEDALQG 240
Query: 143 FNGTPMPNGEQNFRLNWA 160
NG+ + G+Q RL+W
Sbjct: 241 LNGSTI--GKQAVRLSWG 256
>gi|147856810|emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]
Length = 536
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 187/309 (60%), Positives = 224/309 (72%), Gaps = 13/309 (4%)
Query: 111 VKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD 170
+KVIRNKQTG EGYGF+EF S A AE+VLQ + G MPN +Q FRLNWA+F G+KR D
Sbjct: 1 MKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSD 60
Query: 171 T-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
PD +IFVGDLA+DV+D +L ETF +YPS K AKVV D TGR+KGYGFVRFGDE+E+
Sbjct: 61 NGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENER 120
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKAS--YQNSQVAQSDDDPNNTTVFV 287
+AMTEMNGV+CS+RPMRIG AT +K+ QQQY N QSD D NTT+FV
Sbjct: 121 SQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIFV 180
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
G LD V+DE LR+ FSQYG++V VKIP GK CGFVQFA+R+ AE+AL+ LNGT +G Q
Sbjct: 181 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQT 240
Query: 348 IRLSWGRSPSNKQAQPD------PNQWNAGYYGYAQGYENYGYAAAAPQDPSMY---YGG 398
+RLSWGR+P+NKQA NQW+ YYG Q Y+ YGYA P DP+MY YG
Sbjct: 241 VRLSWGRNPANKQANSLFMRADFGNQWSGAYYG-GQVYDGYGYALPPPHDPTMYAAAYGA 299
Query: 399 YPGYGNYQQ 407
YP YGN+QQ
Sbjct: 300 YPVYGNHQQ 308
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 26/207 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTG-EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
++++GDL + ++ L+ FA V A KV+ + TG+ +GYGF+ F + +
Sbjct: 66 SIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMT 125
Query: 142 TFNGT-----PMPNGEQNFRLN------------WASFGAGEKRD-DTPDHTIFVGDLAA 183
NG PM G R + +AS GA + D D+ + TIFVG L
Sbjct: 126 EMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDP 185
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+V+D L++ F ++Y K+ + KG GFV+F + + A+ ++NG
Sbjct: 186 NVSDEDLRQPF-SQYGEIVSVKIPVG------KGCGFVQFANRNNAEDALQKLNGTVIGK 238
Query: 244 RPMRIGPATNKKTVSGQQQYPKASYQN 270
+ +R+ N + +A + N
Sbjct: 239 QTVRLSWGRNPANKQANSLFMRADFGN 265
>gi|125548504|gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
Length = 426
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 187/346 (54%), Positives = 239/346 (69%), Gaps = 19/346 (5%)
Query: 70 VPPQQQGQPG----EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY 125
PP G G E +T+W+GDLQYWMDE YL++CF +GEVV +KVIRN+QTGQ EGY
Sbjct: 88 TPPAPAGSGGNGCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGY 147
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAAD 184
GF+EF S AE+ LQ F G MPN ++ F+LNWAS+ GEKR + D++IFVGDLAAD
Sbjct: 148 GFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAAD 207
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
VTD ML E F +Y S KGAKV+ID TGR++GYGFVRFGD++++ AMTEMNG +CSTR
Sbjct: 208 VTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTR 267
Query: 245 PMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
P+RIGPAT +++ SD D N TV+VG LD V+++ LR+ F+
Sbjct: 268 PIRIGPATPRRSSGDSGSSTP--------GHSDGDSTNRTVYVGGLDPNVSEDELRKAFA 319
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 364
+YG + VKIP GK+CGFVQF R+ AEEAL+ LNG+ +G Q +RLSWGRSPS+KQ++ D
Sbjct: 320 KYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQSRAD 379
Query: 365 P-NQWNAGYYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQ 406
++ N YYG Y YGYA+ P P+MY YG YP YG+ Q
Sbjct: 380 SGSRRNNMYYG-TPFYGGYGYASPVPH-PNMYAAAYGAYPVYGSQQ 423
>gi|116310076|emb|CAH67097.1| H0818E04.14 [Oryza sativa Indica Group]
Length = 426
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 187/346 (54%), Positives = 239/346 (69%), Gaps = 19/346 (5%)
Query: 70 VPPQQQGQPG----EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY 125
PP G G E +T+W+GDLQYWMDE YL++CF +GEVV +KVIRN+QTGQ EGY
Sbjct: 88 TPPAPAGSGGNGCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGY 147
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAAD 184
GF+EF S AE+ LQ F G MPN ++ F+LNWAS+ GEKR + D++IFVGDLAAD
Sbjct: 148 GFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAAD 207
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
VTD ML E F +Y S KGAKV+ID TGR++GYGFVRFGD++++ AMTEMNG +CSTR
Sbjct: 208 VTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTR 267
Query: 245 PMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
P+RIGPAT +++ SD D N TV+VG LD V+++ LR+ F+
Sbjct: 268 PIRIGPATPRRSSGDSGSSTP--------GHSDGDSTNRTVYVGGLDPNVSEDELRKAFA 319
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 364
+YG + VKIP GK+CGFVQF R+ AEEAL+ LNG+ +G Q +RLSWGRSPS+KQ++ D
Sbjct: 320 KYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQSRAD 379
Query: 365 P-NQWNAGYYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQ 406
++ N YYG Y YGYA+ P P+MY YG YP YG+ Q
Sbjct: 380 SGSRRNNMYYG-TPFYGGYGYASPVPH-PNMYAAAYGAYPVYGSQQ 423
>gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
gi|297337206|gb|EFH67623.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 360 bits (924), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 194/363 (53%), Positives = 239/363 (65%), Gaps = 26/363 (7%)
Query: 30 QQQPPPQPSPYMMMMPPQPQAQPPAM---------------WATQAAAPQAAGVAVPPQQ 74
Q + P P P+ M PP P PP M + + Q+ G Q
Sbjct: 42 QPKTSPTPPPHWMRYPP-PVLMPPQMMYAPPPPHPFSPYHQYPSHHLHHQSRGNNNNKHQ 100
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTG---EVVAVKVIRNKQTGQIEGYGFIEFI 131
GE +T+W+GDL +WMDETYLN+ FA ++V+VKVIRNK G EGYGF+EF
Sbjct: 101 NASNGENKTIWVGDLHHWMDETYLNSSFASADGEIQIVSVKVIRNKHNGLSEGYGFVEFD 160
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYM 189
S A++VLQ FNGT MP+ EQ FRLNWASF GEKR ++ PD +IFVGDLA DV+D +
Sbjct: 161 SHDVADKVLQEFNGTTMPDTEQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDTL 220
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L ETF +YPS K AKVVID TGR+KGYGFVRFGDE+E+ +AMTEMNGV CS+R MRIG
Sbjct: 221 LHETFSEKYPSVKAAKVVIDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIG 280
Query: 250 PATNKKTVSGQQQYPKASYQ-NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQ 308
PAT +KT QQQ Y N + + + D NTT+FVG LDS VTD+ LR+ FS++G+
Sbjct: 281 PATPRKTTGYQQQ---GGYMPNGALTRPEGDTLNTTIFVGGLDSSVTDDDLRQPFSEFGE 337
Query: 309 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQ 367
+V VKIP GK CGFVQF +R AEEAL LNGT +G Q +RLSWGR+ +NKQ + NQ
Sbjct: 338 IVSVKIPVGKGCGFVQFVNRPSAEEALEKLNGTVIGKQTVRLSWGRNQANKQPRDKYGNQ 397
Query: 368 WNA 370
W A
Sbjct: 398 WVA 400
>gi|194703366|gb|ACF85767.1| unknown [Zea mays]
Length = 420
Score = 360 bits (924), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 236/332 (71%), Gaps = 16/332 (4%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +T+W+GDLQYWMDE YL+ CF +GEVV +KVIRN+QTGQ EGYGF+EF S A AE+
Sbjct: 97 ENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKA 156
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ F G MPN ++ F+LNWAS+ GEKR + DH+IFVGDLAADVTD ML E F ++Y
Sbjct: 157 LQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKY 216
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKV+ID TGR++GYGFVRFGD++++ AM+EMNGV+CSTRP+RIGPAT +++
Sbjct: 217 RSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGPATPRRSSG 276
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
SD D +N TV+VG LD V+++ LR+ F++Y L VKIP GK
Sbjct: 277 DSGSSTP--------GHSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGK 327
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQ 377
+CGFVQF R+ AEEAL+ LNG+ +G Q +RLSW RSPS+KQ++ D N+ N YYG
Sbjct: 328 QCGFVQFVSRTDAEEALQGLNGSLIGKQAVRLSWVRSPSHKQSRGDSVNRRNNMYYG-TP 386
Query: 378 GYENYGYAAAAPQDPSMY---YGGYPGYGNYQ 406
Y YGYA+ P P+MY YG YP YGN Q
Sbjct: 387 FYGGYGYASPVPH-PNMYAAAYGTYPLYGNQQ 417
>gi|226495169|ref|NP_001150649.1| nucleic acid binding protein [Zea mays]
gi|195640856|gb|ACG39896.1| nucleic acid binding protein [Zea mays]
Length = 420
Score = 360 bits (924), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 236/332 (71%), Gaps = 16/332 (4%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +T+W+GDLQYWMDE YL+ CF +GEVV +KVIRN+QTGQ EGYGF+EF S A AE+
Sbjct: 97 ENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKA 156
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ F G MPN ++ F+LNWAS+ GEKR + DH+IFVGDLAADVTD ML E F ++Y
Sbjct: 157 LQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKY 216
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKV+ID TGR++GYGFVRFGD++++ AM+EMNGV+CSTRP+RIGPAT +++
Sbjct: 217 RSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGPATPRRSSG 276
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
SD D +N TV+VG LD V+++ LR+ F++Y L VKIP GK
Sbjct: 277 DSGSSTP--------GHSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGK 327
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQ 377
+CGFVQF R+ AEEAL+ LNG+ +G Q +RLSW RSPS+KQ++ D N+ N YYG
Sbjct: 328 QCGFVQFVSRTDAEEALQGLNGSLIGKQAVRLSWVRSPSHKQSRGDSVNRRNNMYYG-TP 386
Query: 378 GYENYGYAAAAPQDPSMY---YGGYPGYGNYQ 406
Y YGYA+ P P+MY YG YP YGN Q
Sbjct: 387 FYGGYGYASPVPH-PNMYAAAYGTYPLYGNQQ 417
>gi|413919586|gb|AFW59518.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 329
Score = 360 bits (923), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 173/253 (68%), Positives = 207/253 (81%), Gaps = 9/253 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMD+ Y+ CF++TGEV VK+IR+K +GQ++GYGF+EF SRA AERV
Sbjct: 84 EVRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERV 143
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN + FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 144 LQTYNGQMMPNVDLTFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYP 201
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA ++K G
Sbjct: 202 SVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNAGG 261
Query: 260 --QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG 317
Q++ P NSQ AQS++DPNNTT+FVG LD VT++ L++ FS YG+++HVKIP G
Sbjct: 262 VVQERVP-----NSQGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVG 316
Query: 318 KRCGFVQFADRSC 330
KRCGFVQF R C
Sbjct: 317 KRCGFVQFVTRRC 329
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRM 337
T+++G+L + D ++ FS G++ +VK+ K G FV+F R+ AE L+
Sbjct: 87 TLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 146
Query: 338 LNGTQLGGQNI--RLSWGRSPSNKQAQPD 364
NG + ++ RL+W + + PD
Sbjct: 147 YNGQMMPNVDLTFRLNWASAGEKRDDTPD 175
>gi|195620484|gb|ACG32072.1| nucleic acid binding protein [Zea mays]
gi|195625400|gb|ACG34530.1| nucleic acid binding protein [Zea mays]
Length = 369
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 236/332 (71%), Gaps = 16/332 (4%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +T+W+GDLQYWMDE YL+ CF +GEVV +KVIRN+QTGQ EGYGF+EF S A AE+
Sbjct: 46 ENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKA 105
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ F G MPN ++ F+LNWAS+ GEKR + DH+IFVGDLAADVTD ML E F ++Y
Sbjct: 106 LQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKY 165
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKV+ID TGR++GYGFVRFGD++++ AM+EMNGV+CSTRP+RIGPAT +++
Sbjct: 166 RSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGPATPRRSSG 225
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
SD D +N TV+VG LD V+++ LR+ F++Y L VKIP GK
Sbjct: 226 DSGSSTP--------GHSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGK 276
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQ 377
+CGFVQF R+ AEEAL+ LNG+ +G Q +RLSW RSPS+KQ++ D N+ N YYG
Sbjct: 277 QCGFVQFVSRTDAEEALQGLNGSLIGKQAVRLSWVRSPSHKQSRGDSVNRRNNMYYG-TP 335
Query: 378 GYENYGYAAAAPQDPSMY---YGGYPGYGNYQ 406
Y YGYA+ P P+MY YG YP YGN Q
Sbjct: 336 FYGGYGYASPVPH-PNMYAAAYGTYPLYGNQQ 366
>gi|222641726|gb|EEE69858.1| hypothetical protein OsJ_29658 [Oryza sativa Japonica Group]
Length = 310
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 188/307 (61%), Positives = 223/307 (72%), Gaps = 13/307 (4%)
Query: 107 EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGE 166
+VVA+KVIRNKQTGQ EGYGF+EF S A AE+VL+ F G MPN +Q FR+NWASF G+
Sbjct: 9 QVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIMPNTDQPFRINWASFSMGD 68
Query: 167 KRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
+R D DH+IFVGDLA+DV D L ETF RY S KGAKVVID TGR+KGYGFVRFGD
Sbjct: 69 RRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGD 128
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTV 285
++E+ AMTEMNGV+CSTRPMRIGPAT +KT SG P S A+SD D NTTV
Sbjct: 129 DNEKTHAMTEMNGVYCSTRPMRIGPATPRKT-SGTSG-PTGS-----AARSDGDLTNTTV 181
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
FVG LD V+++ LR+ FSQYG++ VKIP GK+CGFVQF R AE+AL+ LNG+ +G
Sbjct: 182 FVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGK 241
Query: 346 QNIRLSWGRSPSNKQAQPDP-NQWNAG-YYGYAQGYENYGYAAAAPQDPSMY---YGGYP 400
Q +RLSWGR+P+NKQ + D +QWN G YY + Y YGY A P DP MY YG YP
Sbjct: 242 QTVRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFYSGYGYPAPFPADPGMYAAAYGAYP 301
Query: 401 GYGNYQQ 407
YGN QQ
Sbjct: 302 FYGNQQQ 308
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
++++GDL +++T L F+ V KV+ + TG+ +GYGF+ F +
Sbjct: 77 HSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAM 136
Query: 141 QTFNGT-----PMPNGEQNFRLNWASFG----AGEKRDDTPDHTIFVGDLAADVTDYMLQ 191
NG PM G R + G A D + T+FVG L +V++ L+
Sbjct: 137 TEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLR 196
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
+TF ++Y K+ + K GFV+F A+ +NG + +R+
Sbjct: 197 QTF-SQYGEISSVKIPVG------KQCGFVQFVQRKNAEDALQGLNGSTIGKQTVRL 246
>gi|218202287|gb|EEC84714.1| hypothetical protein OsI_31675 [Oryza sativa Indica Group]
Length = 377
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 185/312 (59%), Positives = 221/312 (70%), Gaps = 13/312 (4%)
Query: 102 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161
F +VVA+KVIRNKQTGQ EGYGF+EF S A AE+VL+ F G MPN +Q FR+NWAS
Sbjct: 71 FGLMCQVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIMPNTDQPFRINWAS 130
Query: 162 FGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGF 220
F G++R D DH+IFVGDLA+DV D L ETF RY S KGAKVVID TGR+KGYGF
Sbjct: 131 FSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGF 190
Query: 221 VRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDP 280
VRFGD++E+ AMTEMNGV+CSTRPMRIGPAT +KT S A+SD D
Sbjct: 191 VRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKT-------SGTSGPTGSAARSDGDL 243
Query: 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 340
NTTVFVG LD V+++ LR+ FSQYG++ VKIP GK+CGFVQF R AE+AL+ LNG
Sbjct: 244 TNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNG 303
Query: 341 TQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAG-YYGYAQGYENYGYAAAAPQDPSMY--- 395
+ +G Q +RLSWGR+P+NKQ + D +QWN G +Y + Y YGY A P DP MY
Sbjct: 304 STIGKQTVRLSWGRNPANKQLRSDNGSQWNNGMFYAASPFYSGYGYPAPFPADPGMYAAA 363
Query: 396 YGGYPGYGNYQQ 407
YG YP YGN QQ
Sbjct: 364 YGAYPFYGNQQQ 375
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 17/182 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
++++GDL +++T L F+ V KV+ + TG+ +GYGF+ F +
Sbjct: 144 HSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAM 203
Query: 141 QTFNGT-----PMPNGEQNFRLNWASFG----AGEKRDDTPDHTIFVGDLAADVTDYMLQ 191
NG PM G R + G A D + T+FVG L +V++ L+
Sbjct: 204 TEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLR 263
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
+TF ++Y K+ + K GFV+F A+ +NG + +R+
Sbjct: 264 QTF-SQYGEISSVKIPVG------KQCGFVQFVQRKNAEDALQGLNGSTIGKQTVRLSWG 316
Query: 252 TN 253
N
Sbjct: 317 RN 318
>gi|242062048|ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
gi|241932144|gb|EES05289.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
Length = 435
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 174/319 (54%), Positives = 225/319 (70%), Gaps = 16/319 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+W+GDLQYWMDE YL++CF +GEVV +KVIRN+ +G EGYGF+EF S AE+ LQ
Sbjct: 109 RTIWVGDLQYWMDENYLHSCFGPSGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQ 168
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARYPS 200
F+G MPN ++ F+LNWAS+ GEKR + + DH+IFVGDLA DVTD ML E F +Y S
Sbjct: 169 NFSGHVMPNTDRAFKLNWASYSMGEKRTELSSDHSIFVGDLAVDVTDEMLLELFSNKYRS 228
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
KGAKV+ID TGR++GYGFVRFGD++++ AMTEMNGV+CSTRP+R+GPAT +++
Sbjct: 229 VKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGVYCSTRPIRVGPATPRRSQGDS 288
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 320
P QSD D N TV+VG LD V+++ LR+ F++YG L VKIP GK+C
Sbjct: 289 GSSPP--------RQSDVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQC 340
Query: 321 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAG-----YYGY 375
GFVQF +R+ AEEAL+ LNG +G Q +RLSWGRSP++KQ++ D G YYG
Sbjct: 341 GFVQFVNRADAEEALQGLNGATIGKQAVRLSWGRSPASKQSRGDSGHRRNGNGNGMYYG- 399
Query: 376 AQGYENYGYAAAAPQDPSM 394
Y YGYA+ P P+M
Sbjct: 400 TPFYSGYGYASPVPH-PNM 417
>gi|413922759|gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
Length = 430
Score = 350 bits (897), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 240/369 (65%), Gaps = 21/369 (5%)
Query: 33 PPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEI-RTLWIGDLQY 91
P P P M+ PP P Q + P + P G GE RT+W+GDLQY
Sbjct: 58 PYPPPHHPMVAAPPPPSLQ----FVKHFTPPSSVTPPPPTGSGGNGGEDNRTIWVGDLQY 113
Query: 92 WMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNG 151
WMDE YL++CF +GEVV +KVIRN+ +G EGYGFIEF + AE+ LQ F+G MPN
Sbjct: 114 WMDENYLHSCFGSSGEVVNIKVIRNRHSGVSEGYGFIEFYTHVSAEKALQNFSGHVMPNT 173
Query: 152 EQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR 210
++ F+LNWAS+ GEKR + + DH+IFVGDLA DVTD ML E F +Y S KGAKV+ID
Sbjct: 174 DRAFKLNWASYSMGEKRSEISSDHSIFVGDLAVDVTDAMLLELFSNKYRSVKGAKVIIDA 233
Query: 211 LTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQN 270
TGR++GYGFVRFGD+++++ AMTEMNGV+CSTRP+R+GPAT +++ P
Sbjct: 234 NTGRSRGYGFVRFGDDNDKIHAMTEMNGVYCSTRPIRVGPATPRRSQGDSGTSPP----- 288
Query: 271 SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSC 330
QS D N TV+VG LD V+++ LR+ F++YG L VKIP GK+CGFVQF +R
Sbjct: 289 ---RQSHVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNRVD 345
Query: 331 AEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ-----WNAGYYGYAQGYENYGYA 385
AEEAL LNG+ +G Q +RLSWGRSP++KQ++ D N YYG Y YGYA
Sbjct: 346 AEEALHGLNGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGNCNGMYYG-TPFYGGYGYA 404
Query: 386 AAAPQDPSM 394
+ P P+M
Sbjct: 405 SPIPH-PNM 412
>gi|302794528|ref|XP_002979028.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
gi|302806386|ref|XP_002984943.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300147529|gb|EFJ14193.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300153346|gb|EFJ19985.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
Length = 408
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 177/288 (61%), Positives = 222/288 (77%), Gaps = 6/288 (2%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P +++TLW+GDLQYWMDE+YLN+ F+ TGE+V+ K+IRNK +G EGYGF+EF S A AE
Sbjct: 16 PIDMKTLWVGDLQYWMDESYLNSIFSSTGELVSAKIIRNKASGFPEGYGFVEFASHACAE 75
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRA 196
RVL F GT MP EQ FRLNWA FG GE+R + P+++IFVGDLA DVTDYMLQETFR
Sbjct: 76 RVLTAFTGTQMPQTEQLFRLNWAYFGIGERRPEGGPENSIFVGDLAPDVTDYMLQETFRT 135
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
RYPS +GAKVV D TGR+KGYGFVRF D+SE++RAM+EMNG++CS+RPMRI AT KK
Sbjct: 136 RYPSVRGAKVVTDVATGRSKGYGFVRFADDSERVRAMSEMNGIYCSSRPMRINAATPKKA 195
Query: 257 VSGQQQYPK--ASYQNS--QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 312
+ P+ ++ S Q +D+DPNNTT+FVG LD V++E L++ F ++G+LV+V
Sbjct: 196 LIPSAPAPQKVTTFATSPLQNVPNDNDPNNTTIFVGGLDPAVSEEELQKTFGEFGELVYV 255
Query: 313 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
KIP GK CGFVQF RSCAEEAL L+GT + Q IRLSWGR+ +NKQ
Sbjct: 256 KIPPGKGCGFVQFTHRSCAEEALGKLHGTMIRQQAIRLSWGRT-ANKQ 302
>gi|302813198|ref|XP_002988285.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
gi|300144017|gb|EFJ10704.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
Length = 352
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 185/343 (53%), Positives = 234/343 (68%), Gaps = 28/343 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
++R+LWIGDLQYWMDE+YL +CF + +V+ KVIRNK TG EGYGF+EF S A AE+
Sbjct: 15 DVRSLWIGDLQYWMDESYLKSCFPQS-TIVSTKVIRNKITGHHEGYGFVEFESHAAAEKA 73
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQ+F G MP EQ FRLNWA G G+KRD D +IFVGDLAADVTD ML ETF++RYP
Sbjct: 74 LQSFTGAVMPRTEQAFRLNWACVG-GDKRDSGADDSIFVGDLAADVTDAMLLETFKSRYP 132
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S K AKVV+D +GR +GYGFVRFGDE+E+ AMTEM+GV+CS+RPMRI AT KK
Sbjct: 133 SVKSAKVVMDVNSGRCRGYGFVRFGDEAEKSSAMTEMHGVYCSSRPMRIRTATPKKQT-- 190
Query: 260 QQQYP--KASYQ-----NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 312
QQ+P + SYQ +DD NTT+FVG LD V+ + L+++FS YG++ +
Sbjct: 191 -QQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIKYT 249
Query: 313 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ---------- 362
KIP G+ CGFVQF R+ AEEAL+ ++G+ +G Q +RLSWGR P+NKQ
Sbjct: 250 KIPPGRGCGFVQFMTRASAEEALKQVHGSVIGQQTVRLSWGRHPANKQRLSSSALPWYQP 309
Query: 363 PDPNQWNAGY-YGYAQGYENYGYAAAAPQDPSMYY-GGYPGYG 403
P +QWNA Y Y ++Q YA PQDP++ Y GY YG
Sbjct: 310 PFDSQWNAFYPYNHSQA----PYAYLYPQDPALVYTTGYQVYG 348
>gi|212275334|ref|NP_001130489.1| uncharacterized protein LOC100191587 [Zea mays]
gi|194689276|gb|ACF78722.1| unknown [Zea mays]
Length = 417
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 173/309 (55%), Positives = 219/309 (70%), Gaps = 13/309 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+W+GDLQYWMDE YL++CF GEVV +KVIRN+ +G EGYGF+EF S AE+ LQ
Sbjct: 93 RTIWVGDLQYWMDENYLHSCFGPGGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQ 152
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPS 200
F+G MPN E+ F+LNWAS+ GEKR + PDH+IFVGDLA DVTD ML E F +Y S
Sbjct: 153 NFSGHVMPNTERAFKLNWASYSMGEKRSEVPPDHSIFVGDLAVDVTDEMLLELFSNKYRS 212
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
KGAKV+ID TGR++GYGFVRFGD++++ AMTEMNGV+CSTRP+R+G AT +++
Sbjct: 213 VKGAKVIIDANTGRSRGYGFVRFGDDNDKTLAMTEMNGVYCSTRPIRVGLATPRRSQGDS 272
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 320
P QSD D N TV+VG LD V+++ LR+ F++YG L VKIP GK+C
Sbjct: 273 GSSPP--------RQSDVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQC 324
Query: 321 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD---PNQWNAGYYGYAQ 377
GFVQF +R AEEAL+ LNG+ +G Q IRLSWGRSP++KQ++ D N YYG
Sbjct: 325 GFVQFVNRVDAEEALQGLNGSTIGKQAIRLSWGRSPTSKQSRGDYGHRRNGNGMYYG-TP 383
Query: 378 GYENYGYAA 386
Y YGYA+
Sbjct: 384 FYGGYGYAS 392
>gi|356557398|ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 404
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 178/325 (54%), Positives = 223/325 (68%), Gaps = 27/325 (8%)
Query: 89 LQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPM 148
L+ +DE YL+ CFA GEVV++K+IRN+ TGQ EGYGF+EF+S A AERVLQT+N T
Sbjct: 11 LRTAVDEAYLSHCFAPAGEVVSIKIIRNELTGQPEGYGFVEFVSHATAERVLQTYNAT-- 68
Query: 149 PNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVV 207
+Q FRLNWASFG GE+R D +H+IFVGDLA D+TDY+LQE FRA YPS +GAKVV
Sbjct: 69 ---DQTFRLNWASFGIGERRPDAALEHSIFVGDLAPDITDYLLQEMFRAHYPSVRGAKVV 125
Query: 208 IDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKAS 267
D TGR+KGYGFV+F DE+E+ RAMTEMNGV+CSTRPMRI AT KKT S
Sbjct: 126 SDPNTGRSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAATPKKTTSAYAAPAAPV 185
Query: 268 YQNS-----------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 316
+ QV + D NNT +FVGNLD V++E L++ F Q+G++V VK+ +
Sbjct: 186 PKPVYPVPAYTAPVVQVQPPEYDVNNTAIFVGNLDLNVSEEELKQNFLQFGEIVSVKVQS 245
Query: 317 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP-------DPNQWN 369
GK CGFVQF R+ AEEA++ + +G Q +R+SWGR+ + +Q P DPNQW+
Sbjct: 246 GKGCGFVQFGTRASAEEAIQKMQEKMIGQQVVRISWGRTLTARQDLPGGWGPQMDPNQWS 305
Query: 370 AGYYGYAQGYENYGYAAAAPQDPSM 394
A YYGY QGYE Y Y AA DPS
Sbjct: 306 A-YYGYGQGYEAYAYGAA--HDPSF 327
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++G+L + E L F GE+V+VKV Q+G+ G GF++F +RA AE +Q
Sbjct: 214 IFVGNLDLNVSEEELKQNFLQFGEIVSVKV----QSGK--GCGFVQFGTRASAEEAIQKM 267
Query: 144 NGTPMPNGEQNFRLNW 159
+ G+Q R++W
Sbjct: 268 QEKMI--GQQVVRISW 281
>gi|297602825|ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa Japonica Group]
Length = 387
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 172/337 (51%), Positives = 220/337 (65%), Gaps = 39/337 (11%)
Query: 70 VPPQQQGQPG----EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY 125
PP G G E +T+W+GDLQYWMDE YL++CF +GEVV +KVIRN+QTGQ EGY
Sbjct: 49 TPPAPAGSGGNGCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGY 108
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAAD 184
GF+EF S AE+ LQ F G MPN ++ F+LNWAS+ GEKR + D++IFVGDLAAD
Sbjct: 109 GFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAAD 168
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
VTD ML E F +Y S KGAKV+ID TGR++GYGFVRFGD++++ AMTEMNG +CSTR
Sbjct: 169 VTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTR 228
Query: 245 PMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
P+RIGPAT +++ SD D N TV+VG LD V+++ LR+ F+
Sbjct: 229 PIRIGPATPRRSSGDSGSSTPG--------HSDGDSTNRTVYVGGLDPNVSEDELRKAFA 280
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 364
+YG + VKIP GK+CGFVQF R+ AEEAL+ LNG+ +G Q +RLSWGRSPS+KQ++ D
Sbjct: 281 KYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQSRAD 340
Query: 365 --------------------------PNQWNAGYYGY 375
PN + A Y Y
Sbjct: 341 SGSRRNNMYYGTPFYGGYGYASPVPHPNMYAAAYGAY 377
>gi|302760919|ref|XP_002963882.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
gi|300169150|gb|EFJ35753.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
Length = 332
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/289 (57%), Positives = 210/289 (72%), Gaps = 12/289 (4%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
++R+LWIGDLQYWMDE+YL +CF + +V+ KVIRNK TG EGYGF+EF S A AE+
Sbjct: 15 DVRSLWIGDLQYWMDESYLKSCFPQS-TIVSTKVIRNKITGHHEGYGFVEFESHAAAEKA 73
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQ+F G MP EQ FRLNWA G G+KRD D +IFVGDLAADVTD ML ETF++RYP
Sbjct: 74 LQSFTGAVMPRTEQAFRLNWACVG-GDKRDSGADDSIFVGDLAADVTDAMLLETFKSRYP 132
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S K AKVV+D +GR +GYGFVRFGDE+E+ AMTEM+GV+CS+RPMRI AT KK
Sbjct: 133 SVKSAKVVMDVNSGRCRGYGFVRFGDETEKSSAMTEMHGVYCSSRPMRIRTATPKKQT-- 190
Query: 260 QQQYP--KASYQ-----NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 312
QQ+P + SYQ +DD NTT+FVG LD V+ + L+++FS YG++ +
Sbjct: 191 -QQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIKYT 249
Query: 313 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
KIP G+ CGFVQF R+ AEEAL+ ++G+ +G Q +RLSWGR P+NKQ
Sbjct: 250 KIPPGRGCGFVQFMTRASAEEALKQVHGSVIGQQTVRLSWGRHPANKQV 298
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 40/215 (18%)
Query: 165 GEKRDDTPDHTIFVGDLAADVTDYMLQETF-RARYP--STKGAKVVIDRLTGRTKGYGFV 221
+ RDD ++++GDL Y + E++ ++ +P + KV+ +++TG +GYGFV
Sbjct: 10 AQARDDV--RSLWIGDL-----QYWMDESYLKSCFPQSTIVSTKVIRNKITGHHEGYGFV 62
Query: 222 RFGDESEQLRAMTEMNGVFC--STRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDD 279
F + +A+ G + + R+ N V G ++ D
Sbjct: 63 EFESHAAAEKALQSFTGAVMPRTEQAFRL----NWACVGGDKR---------------DS 103
Query: 280 PNNTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVKIPA---GKRC---GFVQFADRSCAE 332
+ ++FVG+L + VTD L E F S+Y + K+ RC GFV+F D +
Sbjct: 104 GADDSIFVGDLAADVTDAMLLETFKSRYPSVKSAKVVMDVNSGRCRGYGFVRFGDETEKS 163
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 367
A+ ++G + +R+ + KQ Q P Q
Sbjct: 164 SAMTEMHGVYCSSRPMRIR--TATPKKQTQQHPVQ 196
>gi|147781769|emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]
Length = 434
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 177/330 (53%), Positives = 217/330 (65%), Gaps = 35/330 (10%)
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ-TGQIEGYGF-IE--- 129
G EI+TLW+GDL WMD+ YL TCF HTGE + V IR+ ++ +GF IE
Sbjct: 71 HGSTDEIKTLWVGDLHQWMDDNYLRTCFGHTGEWLFVMCIRHIYFINRLLVFGFSIEVLY 130
Query: 130 ------------------FISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT 171
F E ++NGT MPN EQ FRLNWA+F G++R D
Sbjct: 131 IVKSFKIYEWIWLWAGDVFHELGILENFXHSYNGTLMPNTEQPFRLNWATFSTGDRRTDA 190
Query: 172 -PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
D +IFVGDLA+DVTD +LQETF RYPS KGAKVV D TGR+KGYGFVRFGDE+E+
Sbjct: 191 GSDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERS 250
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASY-------QNSQVA---QSDDDP 280
RAM EMNG++CS+RPMRIG AT KK QQQY + N VA Q++ D
Sbjct: 251 RAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDS 310
Query: 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 340
NTT+FVG LDS VTDE LR+ FSQ+G++V VKIP GK CGFVQFA+R+ AE+AL+ LNG
Sbjct: 311 TNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNG 370
Query: 341 TQLGGQNIRLSWGRSPSNKQAQPDP-NQWN 369
T +G Q +RLSWGR+P++KQ + D NQWN
Sbjct: 371 TVIGKQTVRLSWGRNPASKQWRNDSNNQWN 400
>gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542179|gb|EEF43723.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 438
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 178/325 (54%), Positives = 215/325 (66%), Gaps = 63/325 (19%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+T+W+GDL +WMDETYL++CF+HTGEV +VKVIRNKQTGQ EGYGFIEF S A AE+VLQ
Sbjct: 106 KTIWVGDLLHWMDETYLHSCFSHTGEVTSVKVIRNKQTGQPEGYGFIEFYSHATAEKVLQ 165
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPS 200
+NG+ MPN +Q FRLNWASF AGE+R +T D +IFVGDLAADVTD MLQETF ++Y S
Sbjct: 166 NYNGSMMPNADQPFRLNWASF-AGERRTETGSDLSIFVGDLAADVTDAMLQETFSSKYLS 224
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA--------- 251
KGAKVV D TGR+KGYGFVRFGDE
Sbjct: 225 VKGAKVVTDLNTGRSKGYGFVRFGDE-------------------------NERSRAMME 259
Query: 252 ----------------TNKKTVSGQQQYPKASY----------QNSQVAQSDDDPNNTTV 285
T KK+ + QQQY + +Q +QSD D NNTT+
Sbjct: 260 MNGVYCSSRPMRIGVATPKKSPAYQQQYSSQALVLAGGHAPNGSMAQGSQSDGDSNNTTI 319
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
FVG +DS ++DE LR+ FSQ+G++V VKIPAGK CGFVQFADR AE+AL+ LNGT +G
Sbjct: 320 FVGGIDSDISDEDLRQPFSQFGEVVSVKIPAGKGCGFVQFADRKSAEDALQSLNGTTIGK 379
Query: 346 QNIRLSWGRSPSNKQAQPDP-NQWN 369
Q +RLSWGRSP+NKQ + D NQWN
Sbjct: 380 QTVRLSWGRSPANKQWRGDHNNQWN 404
>gi|227204263|dbj|BAH56983.1| AT1G11650 [Arabidopsis thaliana]
Length = 271
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 182/286 (63%), Positives = 203/286 (70%), Gaps = 31/286 (10%)
Query: 1 MMQPAPGAVPP--PPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWAT 58
M QP PG + P PPP A QY YQQ PP PP MW
Sbjct: 2 MQQPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPP----------------PPQMWNP 45
Query: 59 QAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ 118
QAAAP P Q EIRTLWIGDLQYWMDE +L CFAHTGE+V+ KVIRNKQ
Sbjct: 46 QAAAP-------PSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQ 98
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDHTIF 177
TGQ+EGYGFIEF S A AERVLQTFN P+P+ +Q FRLNWAS +G+KRDD+PD+TIF
Sbjct: 99 TGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIF 158
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDLAADVTDY+L ETFRA YPS KGAKVVIDR+TGRTKGYGFVRF DESEQ+RAMTEMN
Sbjct: 159 VGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMN 218
Query: 238 GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQV-AQSDDDPNN 282
GV CSTRPMRIGPA +KK V+GQ+ SYQ+S +D+DPNN
Sbjct: 219 GVPCSTRPMRIGPAASKKGVTGQRD----SYQSSAAGVTTDNDPNN 260
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 23/205 (11%)
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
T+++GDL + + L F A AKV+ ++ TG+ +GYGF+ F + R +
Sbjct: 62 RTLWIGDLQYWMDENFLYGCF-AHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVL 120
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSI 293
N N S Q + ++ + DD + T+FVG+L +
Sbjct: 121 QTFN---------------NAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIFVGDLAAD 165
Query: 294 VTDEHLRELF-----SQYGQLVHVKIPAG--KRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
VTD L E F S G V + G K GFV+F+D S A+ +NG +
Sbjct: 166 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 225
Query: 347 NIRLSWGRSPSNKQAQPDPNQWNAG 371
+R+ S Q D Q +A
Sbjct: 226 PMRIGPAASKKGVTGQRDSYQSSAA 250
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
gi|297331134|gb|EFH61553.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/315 (52%), Positives = 208/315 (66%), Gaps = 42/315 (13%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P +G +++TLW+GDL +WMDETYL++CF+HTGEV +VKVIRNK T Q EGYGFIEF+
Sbjct: 98 PLDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFIEFL 157
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYM 189
SRA AE VLQ ++G+ MPN +Q FR+NWASF GEKR ++ PD +IFVGDL+ DVTD +
Sbjct: 158 SRAAAEEVLQNYSGSLMPNSDQPFRINWASFSTGEKRAVENGPDLSIFVGDLSPDVTDAL 217
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L ETF RYPS K AKVVID TGR+KGYGFVRFGDE+E+ RA+TEMNG +CS R MR+G
Sbjct: 218 LHETFFDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVG 277
Query: 250 PATNKKTVSGQQQYPK----------ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 299
AT K+ ++ QQQ+ A+ + +QSD + N T+FVG +D+ VTDE L
Sbjct: 278 VATPKRAIANQQQHSSQALILAGGHGANGSMAHGSQSDGESTNATIFVGGIDADVTDEDL 337
Query: 300 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
R+ FSQ+G++V VKIP GK CGFVQFA+R AE+A
Sbjct: 338 RQPFSQFGEVVSVKIPVGKGCGFVQFAERKSAEDA------------------------- 372
Query: 360 QAQPDPNQWNAGYYG 374
N G
Sbjct: 373 -----IETLNGTVIG 382
>gi|297791731|ref|XP_002863750.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
gi|297309585|gb|EFH40009.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
Length = 400
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/343 (52%), Positives = 219/343 (63%), Gaps = 34/343 (9%)
Query: 74 QQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISR 133
Q E +T+W+GDL +WMDE YLN+ F+ GE+ +VKVIRNK TG EGYGF+EF+S
Sbjct: 83 QNASNTENKTIWVGDLLHWMDENYLNSSFSSAGEISSVKVIRNKHTGLTEGYGFVEFVSH 142
Query: 134 AGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQE 192
AE+VLQ NG M N EQ FRLNWASF GEKR ++ PD +IFVGDLA +VTD ML++
Sbjct: 143 DVAEKVLQELNGEAMLNAEQPFRLNWASFSTGEKRLENGPDLSIFVGDLAPEVTDTMLEQ 202
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F +YPS K AKVVID TGR+KGYGFVRFGD+SE+ +AM EMNGV C R MRIGPAT
Sbjct: 203 IFSEKYPSVKNAKVVIDGNTGRSKGYGFVRFGDDSERSKAMLEMNGVKCCGRAMRIGPAT 262
Query: 253 NKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 312
+K QQ LDS VTD+ LR+ F+ YG++V V
Sbjct: 263 PRKPSGYHQQ--------------------------GLDSSVTDDDLRQPFAGYGEIVSV 296
Query: 313 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNAG 371
KIP GK CGF+QF +R AEEAL LNG+ +G Q +RLSWGR+P NKQ + + +QW
Sbjct: 297 KIPVGKGCGFIQFVNRENAEEALEKLNGSMIGKQTVRLSWGRNPGNKQPRGEYADQW-VE 355
Query: 372 YYGYAQGYENYGYAAAAPQDPSMYY-----GGYPGYGNYQQPQ 409
Y Q Y YGY P DP MY GGYP Y +QQ Q
Sbjct: 356 PYYGGQYYNGYGYMMPPPVDPRMYAAAPYGGGYPVYSGHQQQQ 398
>gi|218191015|gb|EEC73442.1| hypothetical protein OsI_07730 [Oryza sativa Indica Group]
Length = 312
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 162/303 (53%), Positives = 208/303 (68%), Gaps = 10/303 (3%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
MDE YL+ CF +GEVV +KVIRN+ +G EGYGF+EF S A AE+ LQ F+G MPN +
Sbjct: 1 MDEGYLHNCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFFSHASAEKALQNFSGHVMPNTD 60
Query: 153 QNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
+ F+LNWAS+ GEKR + DH+IFVGDLA DVTD ML + F +Y S KGAKV+ID
Sbjct: 61 RAFKLNWASYSMGEKRSELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDAN 120
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNS 271
TGR++GYGFVRFGD++++ AMTEMNG +CSTRP+RIGPAT + +S
Sbjct: 121 TGRSRGYGFVRFGDDNDKTHAMTEMNGAYCSTRPIRIGPAT--------PRRSSGDSGSS 172
Query: 272 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 331
QSD D N T++VG LD T++ LR+ F++YG L VKIP GK+CGFVQF +R A
Sbjct: 173 PPRQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDA 232
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQD 391
EEAL+ LNG+ +G Q +RLSWGRSP++KQ++ D G Y Y YGYA+ P
Sbjct: 233 EEALQGLNGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGMYYGTPFYGGYGYASPLPH- 291
Query: 392 PSM 394
P+M
Sbjct: 292 PNM 294
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+++G L E L FA G++ +VK+ KQ GF++F++R AE LQ
Sbjct: 184 RTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQC------GFVQFVNRPDAEEALQ 237
Query: 142 TFNGTPMPNGEQNFRLNW 159
NG+ + G+Q RL+W
Sbjct: 238 GLNGSTI--GKQAVRLSW 253
>gi|449488366|ref|XP_004158014.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 260
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 181/269 (67%), Positives = 197/269 (73%), Gaps = 19/269 (7%)
Query: 2 MQPAPGAVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAA 61
MQPAPG P P A Q Q Q PPQ P M P QPQA P Q
Sbjct: 1 MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSP-----QGQ 55
Query: 62 APQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQ 121
PQ+A E+RTLWIGDLQYWMDE Y+ CFAHTGEV +VKVIRNKQTGQ
Sbjct: 56 PPQSA----------NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQ 105
Query: 122 IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGD 180
EGYGFIEF++R AERVLQT+NGT MPNG QNFRLNWAS AGEKR DD+PD+TIFVGD
Sbjct: 106 SEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGD 163
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
LA DVTDY+LQETFRARY S KGAKVVIDRLTGRTKGYGFV+FGDESEQ+RAMTEMNGV
Sbjct: 164 LAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVH 223
Query: 241 CSTRPMRIGPATNKKTVSGQQQYPKASYQ 269
CS+RPMRIGPA NK T SG QQ+ K+ Y+
Sbjct: 224 CSSRPMRIGPAANKNT-SGSQQFSKSKYE 251
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 25/184 (13%)
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
T+++GDL + + + F A KV+ ++ TG+++GYGF+ F R +
Sbjct: 66 RTLWIGDLQYWMDENYIFNCF-AHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVL 124
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSI 293
NG +G Q + + ++ ++ + DD P+ T+FVG+L
Sbjct: 125 QTYNGT---------------AMPNGAQNF-RLNWASAGEKRQDDSPD-YTIFVGDLAGD 167
Query: 294 VTDEHLRELF-SQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQ 346
VTD L+E F ++Y + K+ + GFV+F D S A+ +NG +
Sbjct: 168 VTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSR 227
Query: 347 NIRL 350
+R+
Sbjct: 228 PMRI 231
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 262 QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC- 320
Q P+A Q QS + T+++G+L + + ++ F+ G++ VK+ K+
Sbjct: 45 QQPQAGSPQGQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTG 104
Query: 321 -----GFVQFADRSCAEEALRMLNGTQL--GGQNIRLSWGRSPSNKQ 360
GF++F R AE L+ NGT + G QN RL+W + +Q
Sbjct: 105 QSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQ 151
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
gi|378522727|sp|F4I3B3.1|RB47A_ARATH RecName: Full=Polyadenylate-binding protein RBP47A;
Short=Poly(A)-binding protein RBP47A; AltName:
Full=RNA-binding protein 47A; Short=AtRBP47A
gi|332194327|gb|AEE32448.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/354 (49%), Positives = 215/354 (60%), Gaps = 74/354 (20%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+++TLW+GDL +WMDETYL+TCF+HT EV +VKVIRNKQT Q EGYGF+EF+SR+ AE
Sbjct: 117 DVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEA 176
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRAR 197
LQ+F+G MPN EQ FRLNWASF GEKR ++ PD +IFVGDLA DV+D +L ETF R
Sbjct: 177 LQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGR 236
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
YPS KGAKVVID TGR+KGYGFVRFGDE+E+ RAMTEMNG FCS+R MR+G AT K+
Sbjct: 237 YPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAA 296
Query: 258 S-----GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 312
+ G Q A + SD + NN+T+FVG LD+ VT+E L + FS +G++V V
Sbjct: 297 AYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSV 356
Query: 313 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP------- 365
KIP GK CGFVQFA N+Q+ +
Sbjct: 357 KIPVGKGCGFVQFA-------------------------------NRQSAEEAIGNLNGT 385
Query: 366 ------------------------NQWNAGYYGYAQGYENYGYAAAAPQDPSMY 395
NQWN G Y QGY N GY A QD +MY
Sbjct: 386 VIGKNTVRLSWGRSPNKQWRSDSGNQWNGG-YSRGQGYNN-GY---ANQDSNMY 434
>gi|357480265|ref|XP_003610418.1| RNA-binding protein [Medicago truncatula]
gi|355511473|gb|AES92615.1| RNA-binding protein [Medicago truncatula]
Length = 319
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/289 (62%), Positives = 199/289 (68%), Gaps = 46/289 (15%)
Query: 39 PYMMM----MPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMD 94
PYMMM PQPQ QPP MWA A PQ + AVPP E++TLWIGDLQYWMD
Sbjct: 31 PYMMMHPPQPQPQPQTQPPQMWAPNAQPPQQS--AVPPPSSAD--EVKTLWIGDLQYWMD 86
Query: 95 ETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQN 154
E YL CF+HTGEV +VKVIRNKQT Q EGYGF+EFISRAGAERVLQTFNGT MPNG QN
Sbjct: 87 ENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQN 146
Query: 155 FRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTG 213
FRLNWA+F +GEKR DD+PD+TIFVGDLAADV+D+ L E FR RY S KGAKVVIDR TG
Sbjct: 147 FRLNWATFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTG 206
Query: 214 RTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPK-------- 265
RTKGYGFVRF DESEQ+RAMTEM GV CSTRPMRIGPA+NK + +
Sbjct: 207 RTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTSKAVHFIIYMVLV 266
Query: 266 ----------------------------ASYQNSQ-VAQSDDDPNNTTV 285
ASYQN Q AQ+++DPNNTTV
Sbjct: 267 YFLSFFYELLPSMSYVIYLFILFYFENAASYQNPQGGAQNENDPNNTTV 315
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + + L F + KV+ ++ T +++GYGF+ F + R +
Sbjct: 75 TLWIGDLQYWMDENYLYNCF-SHTGEVGSVKVIRNKQTNQSEGYGFLEFISRAGAERVLQ 133
Query: 235 EMNGVFCST--RPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDS 292
NG + R+ AT SG++++ DD P+ T+FVG+L +
Sbjct: 134 TFNGTIMPNGGQNFRLNWATFS---SGEKRH-------------DDSPD-YTIFVGDLAA 176
Query: 293 IVTDEHLRELF-SQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGG 345
V+D HL E+F ++Y + K+ + GFV+FAD S A+ + G
Sbjct: 177 DVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQGVLCST 236
Query: 346 QNIRL 350
+ +R+
Sbjct: 237 RPMRI 241
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRM 337
T+++G+L + + +L FS G++ VK+ K+ GF++F R+ AE L+
Sbjct: 75 TLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEFISRAGAERVLQT 134
Query: 338 LNGTQL--GGQNIRLSWGRSPSNKQAQPD 364
NGT + GGQN RL+W S ++ D
Sbjct: 135 FNGTIMPNGGQNFRLNWATFSSGEKRHDD 163
>gi|357111822|ref|XP_003557709.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 361
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/333 (49%), Positives = 221/333 (66%), Gaps = 28/333 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R+L IG L WM+E YL +CF + E+++ V RNK+TG+ E +G++ F A A+++LQ
Sbjct: 51 RSLRIGGLLDWMNEEYLRSCFTRSPELLSAVVKRNKETGKSECFGYLNFADHATADQILQ 110
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
++NG MPN +++FRL+W + +KRDD H I+VGDLA DVTD+ML F++RYPS
Sbjct: 111 SYNGQKMPNADRDFRLSWVTNYPVQKRDDD-GHNIYVGDLAFDVTDFMLHHVFKSRYPSV 169
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
K AK+ D GR+KGYGFV FGD +E+ +AMTEMNG +CSTRPMR+GPAT ++G+
Sbjct: 170 KHAKIAWDHFNGRSKGYGFVVFGDVNERRQAMTEMNGAYCSTRPMRVGPATK---MAGK- 225
Query: 262 QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 321
SD D NNT +FVG LD IVTDE L++ FS YG+L VK+ AGK+CG
Sbjct: 226 -------------YSDSDSNNTRLFVGGLDRIVTDEDLKKAFSPYGELTEVKVIAGKKCG 272
Query: 322 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYEN 381
FV + +R+ AEEA+R+LNG+ LG IR+SWGRS +KQ D NQWN G GY +
Sbjct: 273 FVTYLNRASAEEAMRILNGSLLGDNTIRISWGRSLYHKQKH-DQNQWNGERQGSGPGYRS 331
Query: 382 YGYAAAAPQDPSMY-YGGYPGYGNYQQPQQPQQ 413
+ P+DP M+ Y G+P Y +Y PQQ Q
Sbjct: 332 H------PEDPKMHGYTGHPEYPHY--PQQQAQ 356
>gi|222628961|gb|EEE61093.1| hypothetical protein OsJ_14988 [Oryza sativa Japonica Group]
Length = 373
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/305 (54%), Positives = 214/305 (70%), Gaps = 15/305 (4%)
Query: 107 EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGE 166
+VV +KVIRN+QTGQ EGYGF+EF S AE+ LQ F G MPN ++ F+LNWAS+ GE
Sbjct: 76 KVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGE 135
Query: 167 KRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
KR + D++IFVGDLAADVTD ML E F +Y S KGAKV+ID TGR++GYGFVRFGD
Sbjct: 136 KRSEVASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 195
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTV 285
++++ AMTEMNG +CSTRP+RIGPAT +++ +S SD D N TV
Sbjct: 196 DNDKSHAMTEMNGAYCSTRPIRIGPATPRRS--------SGDSGSSTPGHSDGDSTNRTV 247
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
+VG LD V+++ LR+ F++YG + VKIP GK+CGFVQF R+ AEEAL+ LNG+ +G
Sbjct: 248 YVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGK 307
Query: 346 QNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQGYENYGYAAAAPQDPSMY---YGGYPG 401
Q +RLSWGRSPS+KQ++ D ++ N YYG Y YGYA+ P P+MY YG YP
Sbjct: 308 QAVRLSWGRSPSHKQSRADSGSRRNNMYYG-TPFYGGYGYASPVPH-PNMYAAAYGAYPV 365
Query: 402 YGNYQ 406
YG+ Q
Sbjct: 366 YGSQQ 370
>gi|255073999|ref|XP_002500674.1| predicted protein [Micromonas sp. RCC299]
gi|226515937|gb|ACO61932.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 167/326 (51%), Positives = 206/326 (63%), Gaps = 9/326 (2%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
+ GE++TLW+GDL YWM+E+YL+TCFAH G + +VK+IRNKQTG EGYGF+EF+ RA A
Sbjct: 8 ETGEVKTLWVGDLGYWMEESYLHTCFAHFGAIGSVKIIRNKQTGFSEGYGFVEFVDRATA 67
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----DHTIFVGDLAADVTDYMLQE 192
E L+T NGTPMP+ QNFRLNWASFG G DH++FVGDL +V DY LQE
Sbjct: 68 EHALKTLNGTPMPSAHQNFRLNWASFGVGGGAGGAGGAANDHSVFVGDLPPEVNDYALQE 127
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
TF RYPS + A+VV D TGR+KG+GFVRFGDE E+ RA+ EMNGV C +R MRI A
Sbjct: 128 TFAERYPSVRNARVVTDPNTGRSKGFGFVRFGDEGERDRALVEMNGVPCGSRVMRISLAI 187
Query: 253 NKKTVSGQQQYPKASYQNSQVAQSDD----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQ 308
+K V G S +P N+TVFVG LD +T+ LR F +G+
Sbjct: 188 PRKGVDGVGGGGVGSNTGVGSNGVGGSPAPEPENSTVFVGGLDPTLTEPDLRTHFEAFGE 247
Query: 309 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQW 368
LV+VKIPAGK CGFVQF R+ AE +++ LNGT +G +RLSW RS +
Sbjct: 248 LVYVKIPAGKGCGFVQFTRRADAEASIQALNGTMMGASRVRLSWVRSGGGGGGRHTGPFG 307
Query: 369 NAGYYGY-AQGYENYGYAAAAPQDPS 393
YG GY Y A A DPS
Sbjct: 308 GGSPYGMPYGGYPPYAMAGAYGVDPS 333
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis thaliana]
Length = 468
Score = 306 bits (785), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 180/373 (48%), Positives = 219/373 (58%), Gaps = 89/373 (23%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+++TLW+GDL +WMDETYL+TCF+HT EV +VKVIRNKQT Q EGYGF+EF+SR+ AE
Sbjct: 117 DVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEA 176
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRAR 197
LQ+F+G MPN EQ FRLNWASF GEKR ++ PD +IFVGDLA DV+D +L ETF R
Sbjct: 177 LQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGR 236
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA------------------------- 232
YPS KGAKV
Sbjct: 237 YPSVKGAKV--------------------------VIDSNTGRSKGYGFVRFGDENERSR 270
Query: 233 -MTEMNGVFCSTRPMRIGPATNKKTVS-GQQQYPK-----------ASYQNSQV------ 273
MTEMNG FCS+R MR+G AT K+ + GQQ + AS N V
Sbjct: 271 AMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQGLITCLDALNIASEVNCNVFIGLAL 330
Query: 274 ----------AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFV 323
+ SD + NN+T+FVG LD+ VT+E L + FS +G++V VKIP GK CGFV
Sbjct: 331 TLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFV 390
Query: 324 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQGYENY 382
QFA+R AEEA+ LNGT +G +RLSWGRSP NKQ + D NQWN G Y QGY N
Sbjct: 391 QFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGG-YSRGQGYNN- 447
Query: 383 GYAAAAPQDPSMY 395
GY A QD +MY
Sbjct: 448 GY---ANQDSNMY 457
>gi|223973753|gb|ACN31064.1| unknown [Zea mays]
Length = 359
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 209/333 (62%), Gaps = 40/333 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R+LWIG L WMDE YL CF + E++++ + RNKQTGQ EG+GF++F A +L+
Sbjct: 37 RSLWIGGLLLWMDEDYLYGCFTTSRELLSLVIKRNKQTGQSEGFGFLKFSDHTAAAHILK 96
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKR--------------------DDTPDHTIFVGDL 181
++NG MPN Q+F+LNWA+ K+ D + DH+IFVGDL
Sbjct: 97 SYNGQKMPNAVQDFKLNWATQQPAPKKLPDPDFKLDLATQQERHAAVDSSSDHSIFVGDL 156
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
A +VT YML F+ARYPS K AK++ D+ TG +K YGFV+FGD EQ++A+TEMNG +C
Sbjct: 157 AYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVDEQIQALTEMNGAYC 216
Query: 242 STRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 301
STRPMRIGP KK S+++ Q +S D NN+ +FVG LD VT E L +
Sbjct: 217 STRPMRIGPVPKKKN----------SFRSKQWTESYHDANNSRLFVGQLDQSVTSEDLMQ 266
Query: 302 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
FS YG+LV VK GK CGFV +++R+ AEEA+RMLNG+QLGG+ I+LSWG ++KQA
Sbjct: 267 AFSPYGELVDVKALPGKGCGFVTYSNRASAEEAIRMLNGSQLGGKAIKLSWGYPSADKQA 326
Query: 362 Q--------PDPNQWNAGY-YGYAQGYE-NYGY 384
Q D W+ Y Y YAQ + YGY
Sbjct: 327 QRNSGGGFGRDCFVWSPQYPYAYAQTCQPGYGY 359
>gi|222623094|gb|EEE57226.1| hypothetical protein OsJ_07197 [Oryza sativa Japonica Group]
Length = 459
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/304 (51%), Positives = 202/304 (66%), Gaps = 16/304 (5%)
Query: 106 GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAG 165
G+VV +KVIRN+ +G EGYGF+EF S A AE+ LQ F+G MPN ++ F+LNWAS+ G
Sbjct: 139 GKVVTIKVIRNRHSGVSEGYGFVEFFSHASAEKALQNFSGHVMPNTDRAFKLNWASYSMG 198
Query: 166 EKRDD-TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
EKR + DH+IFVGDLA DVTD ML + F +Y S KGAKV+ID TGR++GYGFVRFG
Sbjct: 199 EKRAELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFG 258
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPAT------NKKTVSGQQQYPKASYQNSQVA---- 274
D++++ AMTEMNG +CSTRP+RIGPAT + G +A+ V
Sbjct: 259 DDNDKTHAMTEMNGAYCSTRPIRIGPATPRDLQPTSASAYGLVAKARANIWGEYVGDSGS 318
Query: 275 ----QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSC 330
QSD D N T++VG LD T++ LR+ F++YG L VKIP GK+CGFVQF +R
Sbjct: 319 SPPRQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPD 378
Query: 331 AEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQ 390
AEEAL+ LNG+ +G Q +RLSWGRSP++KQ++ D G Y Y YGYA+ P
Sbjct: 379 AEEALQGLNGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGMYYGTPFYGGYGYASPLPH 438
Query: 391 DPSM 394
P+M
Sbjct: 439 -PNM 441
>gi|384244508|gb|EIE18010.1| hypothetical protein COCSUDRAFT_31894 [Coccomyxa subellipsoidea
C-169]
Length = 407
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/302 (49%), Positives = 204/302 (67%), Gaps = 25/302 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TLW+GDL YWMDE+++ + F TG +V+VK+IRNK T EGYGF+EF + AE+VL+
Sbjct: 11 KTLWMGDLAYWMDESFIYSIFVGTGNLVSVKIIRNKNTAVSEGYGFVEFATHEAAEQVLR 70
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
TFNG P+PN +Q FRLNWA+FG G+ D+ D+++FVGDLA DVTDY LQE FR + S
Sbjct: 71 TFNGCPIPNTDQIFRLNWAAFGVGKVTTDS-DYSVFVGDLAPDVTDYALQEHFRQFFASV 129
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ- 260
+ AKV+ D LTGR+KGYGFVRFG+E+E+ R++TEM+G ++RP+R+ AT KK+ +
Sbjct: 130 RSAKVITDPLTGRSKGYGFVRFGNEAERDRSLTEMSGHVINSRPIRVSIATAKKSQTATM 189
Query: 261 --QQYPKASYQN-------------SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQ 305
+Q ++N SQ SD DPNNTT+F+G L S V+++ LR LF +
Sbjct: 190 LPKQCQNFDFENFRLRVQGAPAPVASQPHPSDYDPNNTTLFIGGLSSGVSEDDLRVLFGR 249
Query: 306 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRM--------LNGTQLGGQNIRLSWGRSPS 357
+G +V+ KIP GK CGFVQF R AE A+ L G LGG IR+SWGRS +
Sbjct: 250 FGDIVYTKIPPGKGCGFVQFVQRPAAESAMAQMQARCSPSLFGQILGGSTIRISWGRSST 309
Query: 358 NK 359
++
Sbjct: 310 SR 311
>gi|84453184|dbj|BAE71189.1| putative DNA binding protein [Trifolium pratense]
Length = 253
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 139/176 (78%), Positives = 150/176 (85%), Gaps = 1/176 (0%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE YL CF+HTGEV VKVIRNKQT Q EGYGF+EF SRAGAER+
Sbjct: 66 EVRTLWIGDLQYWMDENYLYQCFSHTGEVGNVKVIRNKQTNQSEGYGFLEFTSRAGAERI 125
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NG MPNG QNFRLNWA+F +GEKR DD+PD TIFVGDLAADVTDY L E FR RY
Sbjct: 126 LQQYNGNIMPNGGQNFRLNWATFSSGEKRHDDSPDFTIFVGDLAADVTDYHLTEVFRTRY 185
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
S KGAKVVIDR TGRTKGYGFVRF DE EQ+RAM+EM GV CSTRPMRIGPA+NK
Sbjct: 186 NSVKGAKVVIDRTTGRTKGYGFVRFADEGEQMRAMSEMQGVLCSTRPMRIGPASNK 241
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + + L + F + KV+ ++ T +++GYGF+ F + R +
Sbjct: 69 TLWIGDLQYWMDENYLYQCF-SHTGEVGNVKVIRNKQTNQSEGYGFLEFTSRAGAERILQ 127
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
+ NG I P +G Q + S + DD + T+FVG+L + V
Sbjct: 128 QYNG--------NIMP-------NGGQNFRLNWATFSSGEKRHDDSPDFTIFVGDLAADV 172
Query: 295 TDEHLRELF-SQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQN 347
TD HL E+F ++Y + K+ + GFV+FAD A+ + G +
Sbjct: 173 TDYHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADEGEQMRAMSEMQGVLCSTRP 232
Query: 348 IRL 350
+R+
Sbjct: 233 MRI 235
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRM 337
T+++G+L + + +L + FS G++ +VK+ K+ GF++F R+ AE L+
Sbjct: 69 TLWIGDLQYWMDENYLYQCFSHTGEVGNVKVIRNKQTNQSEGYGFLEFTSRAGAERILQQ 128
Query: 338 LNGTQL--GGQNIRLSWGRSPSNKQAQPD 364
NG + GGQN RL+W S ++ D
Sbjct: 129 YNGNIMPNGGQNFRLNWATFSSGEKRHDD 157
>gi|413921125|gb|AFW61057.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 322
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/238 (65%), Positives = 175/238 (73%), Gaps = 13/238 (5%)
Query: 31 QQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAA------GVAVPPQQQGQPGEIRTL 84
Q PPP + Y +PP P A + PQAA A P E+RTL
Sbjct: 69 QAPPPPQAAYGQALPP-----PQAAYGQAPPPPQAAYYGAVPAPAAVAAAPVGPSEVRTL 123
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
WIGDLQYWMD+ Y+ CFA TGEV VK+IR+K TGQ++GYGFIEFISRA AERVLQT+N
Sbjct: 124 WIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVLQTYN 183
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
GT MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFRA YPS KGA
Sbjct: 184 GTMMPNVELPFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGA 241
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NKK Q++
Sbjct: 242 KVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVVQEK 299
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 30/185 (16%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + D + F A + K++ D+ TG+ +GYGF+ F + R +
Sbjct: 122 TLWIGDLQYWMDDNYIYGCF-ASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVLQ 180
Query: 235 EMNGVFC--STRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDS 292
NG P R+ A+ + DD + T+FVG+L +
Sbjct: 181 TYNGTMMPNVELPFRLNWAS--------------------AGEKRDDTPDYTIFVGDLAA 220
Query: 293 IVTDEHLRELF-SQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGG 345
VTD L+E F + Y + K+ K GFV+F D + A+ +NG
Sbjct: 221 DVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSS 280
Query: 346 QNIRL 350
+ +R+
Sbjct: 281 RPMRI 285
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRM 337
T+++G+L + D ++ F+ G++ +VK+ K G F++F R+ AE L+
Sbjct: 122 TLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVLQT 181
Query: 338 LNGTQLGGQNI--RLSWGRSPSNKQAQPD 364
NGT + + RL+W + + PD
Sbjct: 182 YNGTMMPNVELPFRLNWASAGEKRDDTPD 210
>gi|303290118|ref|XP_003064346.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453944|gb|EEH51251.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 420
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 151/288 (52%), Positives = 185/288 (64%), Gaps = 16/288 (5%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLWIGDL YWMDE YL+ CFA G V +VK+IRNKQTG EGYGF+E RA AE L+
Sbjct: 14 TLWIGDLGYWMDEAYLHQCFASVGGVASVKIIRNKQTGYSEGYGFVEMCDRATAEHALRA 73
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEK--------RDDTPDHTIFVGDLAADVTDYMLQETF 194
NGT MPN +QN+RLNWASFG G + ++ DH+IFVGDL +V D+MLQE F
Sbjct: 74 LNGTQMPNAQQNYRLNWASFGVGARFAGGGDGGATNSNDHSIFVGDLPPEVNDFMLQEVF 133
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+RY S + A+VV D TGR+KG+GFVRF DES++ RA+ EMNG+ C +R MRI A +
Sbjct: 134 SSRYASVRNARVVTDPATGRSKGFGFVRFADESQRDRALVEMNGLACGSRNMRISLAIPR 193
Query: 255 KTVSGQQQ-------YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 307
K ++ Q DD +N TVFVG L SI +D LR F YG
Sbjct: 194 KNMTVGYQGGGGGGGDGGGGGGGGGGGARDDGDDNCTVFVGGLGSI-SDAELRIHFEPYG 252
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
+LV++KIP GK CGFVQFA RSCAE A+ LN +G +RLSW RS
Sbjct: 253 ELVYIKIPHGKGCGFVQFAQRSCAEAAIAGLNNALIGTSRVRLSWVRS 300
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCA 331
++ +T+++G+L + + +L + F+ G + VKI K+ GFV+ DR+ A
Sbjct: 8 EEAGGSTLWIGDLGYWMDEAYLHQCFASVGGVASVKIIRNKQTGYSEGYGFVEMCDRATA 67
Query: 332 EEALRMLNGTQL--GGQNIRLSW 352
E ALR LNGTQ+ QN RL+W
Sbjct: 68 EHALRALNGTQMPNAQQNYRLNW 90
>gi|326532404|dbj|BAK05131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 356
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 211/361 (58%), Gaps = 30/361 (8%)
Query: 43 MMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF 102
M PP PP AA +G Q+ E R+L I +L WMDE YL +CF
Sbjct: 11 MAPPYHYHGPPQQEQAAPAAEDESGAGSGEQE----AESRSLRIRELFPWMDEDYLRSCF 66
Query: 103 AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF 162
+ E+V + RN++T Q EG+G++ F A A+++L ++NG MPN +++F L+W +
Sbjct: 67 TRSPELVTAVITRNRETKQSEGFGYLTFSDHATADQILHSYNGQKMPNADRDFSLSWVQY 126
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
A + +H I+VG L+ DVTD+ML F+ RYPS K AKV+ + R+KGYGFV
Sbjct: 127 AAADH-----EHAIYVGGLSFDVTDFMLHHVFKNRYPSVKKAKVIWNVFARRSKGYGFVV 181
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNN 282
FGD +E +AMTEMNG +CS+RPMRIGPAT K Q YP D + NN
Sbjct: 182 FGDVNECTQAMTEMNGAYCSSRPMRIGPATFKSDFRTQGTYP------------DSNRNN 229
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ 342
+ +FVG LDS VTDE L + FS YG+L VKI GK CGFV ++ R+ AEEAL +LNG+Q
Sbjct: 230 SRLFVGQLDSCVTDEDLIKAFSPYGELT-VKIIEGKSCGFVTYSSRASAEEALTILNGSQ 288
Query: 343 LGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPG 401
LG I + W R KQ +QWN +G+ Q GY P+DP++ Y G+PG
Sbjct: 289 LGDNIITVVWARHAPKKQ-----DQWNGVDHGHPQS-SGPGY-GCCPEDPNIVGYTGHPG 341
Query: 402 Y 402
Y
Sbjct: 342 Y 342
>gi|297737424|emb|CBI26625.3| unnamed protein product [Vitis vinifera]
Length = 194
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 134/170 (78%), Positives = 147/170 (86%), Gaps = 1/170 (0%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
M+E YL CF+ TGEVV+VKVIRNKQTGQ EGYGFIE +RA AER+LQT+NGT MPN E
Sbjct: 1 MEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSE 60
Query: 153 QNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
QNFRLNWA+ GAGE+R DDTPD+TIFVGDLA+DVTDY+LQETFR YPS KGAKVV DR
Sbjct: 61 QNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRT 120
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
TGR+KGYGFVRFGDE EQLRAM EMNG+FCSTRPMRIGPA KK V GQQ
Sbjct: 121 TGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATKKPVGGQQ 170
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 26/146 (17%)
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC--STRPMRIGPATNKKTVSGQQ 261
KV+ ++ TG+ +GYGF+ + R + NG S + R+ AT +G++
Sbjct: 19 VKVIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSEQNFRLNWAT---LGAGER 75
Query: 262 QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELF-----SQYGQLVHVKIPA 316
+ +DD P+ T+FVG+L S VTD L+E F S G V
Sbjct: 76 R-------------ADDTPD-YTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTT 121
Query: 317 G--KRCGFVQFADRSCAEEALRMLNG 340
G K GFV+F D A+ +NG
Sbjct: 122 GRSKGYGFVRFGDEGEQLRAMNEMNG 147
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 296 DEHLRELFSQYGQLVHVKIPAGKR---C---GFVQFADRSCAEEALRMLNGTQL--GGQN 347
+ +L FSQ G++V VK+ K+ C GF++ A R+ AE L+ NGT + QN
Sbjct: 3 ENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSEQN 62
Query: 348 IRLSWGRSPSNKQAQPD 364
RL+W + ++ D
Sbjct: 63 FRLNWATLGAGERRADD 79
>gi|110681486|emb|CAL25353.1| ACBF-like dna binding protein [Platanus x acerifolia]
Length = 216
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 128/190 (67%), Positives = 154/190 (81%), Gaps = 1/190 (0%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
G E +T+W+GDL YWMD YLN CFAHTGEV+++KVIRNKQTGQ EGYGF+EF SR
Sbjct: 23 GLTEENKTIWVGDLHYWMDGNYLNNCFAHTGEVISIKVIRNKQTGQSEGYGFVEFFSREA 82
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETF 194
AE+VLQ +NGT MPN EQ FRLNWASF GE+R + DH+IFVGDL++DVTD +LQETF
Sbjct: 83 AEKVLQNYNGTAMPNTEQPFRLNWASFSMGERRSEAGSDHSIFVGDLSSDVTDTLLQETF 142
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+RYPS KGAKVVID TGR+KGYGFVRFGD++E+ RA++EMNG +CS RPMR+G AT +
Sbjct: 143 ASRYPSVKGAKVVIDANTGRSKGYGFVRFGDDNERSRAISEMNGAYCSNRPMRVGVATPR 202
Query: 255 KTVSGQQQYP 264
K+ QQQY
Sbjct: 203 KSSGYQQQYS 212
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 27/187 (14%)
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ TI+VGDL + L F A KV+ ++ TG+++GYGFV F +
Sbjct: 28 NKTIWVGDLHYWMDGNYLNNCF-AHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAEKV 86
Query: 233 MTEMNGVFC--STRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNL 290
+ NG + +P R+ A+ G+++ S + ++FVG+L
Sbjct: 87 LQNYNGTAMPNTEQPFRLNWASFSM---GERRSEAGS--------------DHSIFVGDL 129
Query: 291 DSIVTDEHLRELF-SQY----GQLVHVKIPAG--KRCGFVQFADRSCAEEALRMLNGTQL 343
S VTD L+E F S+Y G V + G K GFV+F D + A+ +NG
Sbjct: 130 SSDVTDTLLQETFASRYPSVKGAKVVIDANTGRSKGYGFVRFGDDNERSRAISEMNGAYC 189
Query: 344 GGQNIRL 350
+ +R+
Sbjct: 190 SNRPMRV 196
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEAL 335
N T++VG+L + +L F+ G+++ +K+ K+ GFV+F R AE+ L
Sbjct: 28 NKTIWVGDLHYWMDGNYLNNCFAHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAEKVL 87
Query: 336 RMLNGTQL--GGQNIRLSW 352
+ NGT + Q RL+W
Sbjct: 88 QNYNGTAMPNTEQPFRLNW 106
>gi|46806694|dbj|BAD17764.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 396
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 150/316 (47%), Positives = 194/316 (61%), Gaps = 48/316 (15%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E RT+W+GDLQYWMDE YL+ CF +GE V
Sbjct: 110 ENRTIWVGDLQYWMDEGYLHNCFGPSGEHV------------------------------ 139
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARY 198
MPN ++ F+LNWAS+ GEKR + DH+IFVGDLA DVTD ML + F +Y
Sbjct: 140 --------MPNTDRAFKLNWASYSMGEKRAELASDHSIFVGDLAVDVTDEMLMDLFAKKY 191
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKV+ID TGR++GYGFVRFGD++++ AMTEMNG +CSTRP+RIGPAT +++
Sbjct: 192 RSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGAYCSTRPIRIGPATPRRS-- 249
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
+S QSD D N T++VG LD T++ LR+ F++YG L VKIP GK
Sbjct: 250 ------SGDSGSSPPRQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGK 303
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQG 378
+CGFVQF +R AEEAL+ LNG+ +G Q +RLSWGRSP++KQ++ D G Y
Sbjct: 304 QCGFVQFVNRPDAEEALQGLNGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGMYYGTPF 363
Query: 379 YENYGYAAAAPQDPSM 394
Y YGYA+ P P+M
Sbjct: 364 YGGYGYASPLPH-PNM 378
>gi|125586872|gb|EAZ27536.1| hypothetical protein OsJ_11491 [Oryza sativa Japonica Group]
Length = 257
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 130/184 (70%), Positives = 153/184 (83%), Gaps = 1/184 (0%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQ+WM+E YL CF+ GE+++ K+IRNKQTGQ EGYGFIEF S A AE+V
Sbjct: 65 EVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQV 124
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NG MPNG Q F+LNWA+ GAGEKR DD D+TIFVGDLA+DVTD +LQ+TF+A Y
Sbjct: 125 LQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHY 184
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKVV DR TGR+KGYGFV+FGD EQ RAMTEMNG +CS+RPMRIGPA+NKK +
Sbjct: 185 QSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIG 244
Query: 259 GQQQ 262
GQQQ
Sbjct: 245 GQQQ 248
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 25/200 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + + L F ++ AK++ ++ TG+ +GYGF+ FG + + +
Sbjct: 68 TLWIGDLQFWMEENYLYNCF-SQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQ 126
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQS-DDDPNNTTVFVGNLDSI 293
NG ++ P N Q K ++ S + DD ++ T+FVG+L S
Sbjct: 127 GYNG--------QMMPNGN--------QVFKLNWATSGAGEKRGDDGSDYTIFVGDLASD 170
Query: 294 VTDEHLRELFSQYGQLVHVKIPAGKRC-------GFVQFADRSCAEEALRMLNGTQLGGQ 346
VTD L++ F + Q V R GFV+F D A+ +NG +
Sbjct: 171 VTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSR 230
Query: 347 NIRLSWGRSPSNKQAQPDPN 366
+R+ + N Q P+
Sbjct: 231 PMRIGPASNKKNIGGQQQPS 250
>gi|34395215|dbj|BAC83714.1| RNA Binding Protein-like [Oryza sativa Japonica Group]
gi|50508741|dbj|BAD31317.1| RNA Binding Protein-like [Oryza sativa Japonica Group]
Length = 206
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 127/188 (67%), Positives = 147/188 (78%), Gaps = 3/188 (1%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAER 138
EIR+LWIGDLQYWMDE+YL+ FA G+ V +VKVIRNKQ+G EGYGFIEF S A AE
Sbjct: 11 EIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEY 70
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRA 196
L FNG M N +Q F+LNWAS GAGE+R DD P+HTIFVGDLA+DVTD ML+E F+
Sbjct: 71 ALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSMLEEAFKT 130
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS +GAKVV D++TGR+KGYGFVRFGDE+EQ RAMTEMNG STR MR+GPA NKK
Sbjct: 131 SYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRLGPAANKKN 190
Query: 257 VSGQQQYP 264
+ QQ Y
Sbjct: 191 MGTQQTYS 198
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + L F KV+ ++ +G ++GYGF+ F + A+
Sbjct: 14 SLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEYALA 73
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQ---SDDDPNNTTVFVGNLD 291
NG + + Q K ++ +S + +DD P +T +FVG+L
Sbjct: 74 NFNG----------------RMMLNVDQLFKLNWASSGAGERRAADDGPEHT-IFVGDLA 116
Query: 292 SIVTDEHLRELFS------QYGQLVHVKIPA-GKRCGFVQFADRSCAEEALRMLNGTQLG 344
S VTD L E F + ++V K+ K GFV+F D + A+ +NG L
Sbjct: 117 SDVTDSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLS 176
Query: 345 GQNIRL 350
+ +RL
Sbjct: 177 TRQMRL 182
>gi|70982362|ref|XP_746709.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
fumigatus Af293]
gi|66844333|gb|EAL84671.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus Af293]
gi|159123048|gb|EDP48168.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus A1163]
Length = 418
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/311 (45%), Positives = 189/311 (60%), Gaps = 22/311 (7%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
A P QQG G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F+
Sbjct: 55 AAPVAQQGNEGKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFV 113
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADV 185
+F S A A + L + NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V
Sbjct: 114 DFSSPAAAAKAL-SLNGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEV 172
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+Y+L F+ R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C RP
Sbjct: 173 NEYVLVSLFQNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRP 232
Query: 246 MRIGPATNKK----TVSGQQQYPKAS-------------YQNSQVAQSDDDPNNTTVFVG 288
MRI AT K V G P + Y Q DPNNTTVFVG
Sbjct: 233 MRISTATPKNKGPGVVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVG 292
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +
Sbjct: 293 GLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRV 352
Query: 349 RLSWGRSPSNK 359
RLSWGRS +N
Sbjct: 353 RLSWGRSQNNS 363
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAV 111
P M+ A P A P Q T+++G L ++ E L + F GE+ V
Sbjct: 257 PAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYV 316
Query: 112 KVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
K+ K G GF++F+ R AE + G P+ G RL+W
Sbjct: 317 KIPPGK------GCGFVQFVQRHAAEMAINQMQGYPI--GNSRVRLSWG 357
>gi|125558527|gb|EAZ04063.1| hypothetical protein OsI_26200 [Oryza sativa Indica Group]
Length = 323
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/187 (67%), Positives = 147/187 (78%), Gaps = 3/187 (1%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAER 138
EIR+LWIGDLQYWMDE+YL+ FA G+ V +VKVIRNKQ+G EGYGFIEF S A AE
Sbjct: 126 EIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEY 185
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRA 196
L FNG M N +Q F+LNWAS GAGE+R DD P+HTIFVGDLA+DVTD ML+E F+
Sbjct: 186 ALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSMLEEAFKT 245
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS +GAKVV D++TGR+KGYGFVRFGDE+EQ RAMTEMNG STR MR+GPA NKK
Sbjct: 246 SYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRLGPAANKKN 305
Query: 257 VSGQQQY 263
+ QQ Y
Sbjct: 306 MGTQQTY 312
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + L F KV+ ++ +G ++GYGF+ F + A+
Sbjct: 129 SLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEYALA 188
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQ---SDDDPNNTTVFVGNLD 291
NG + + Q K ++ +S + +DD P +T +FVG+L
Sbjct: 189 NFNG----------------RMMLNVDQLFKLNWASSGAGERRAADDGPEHT-IFVGDLA 231
Query: 292 SIVTDEHLRELFS------QYGQLVHVKIPA-GKRCGFVQFADRSCAEEALRMLNGTQLG 344
S VTD L E F + ++V K+ K GFV+F D + A+ +NG L
Sbjct: 232 SDVTDSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLS 291
Query: 345 GQNIRL 350
+ +RL
Sbjct: 292 TRQMRL 297
>gi|125600441|gb|EAZ40017.1| hypothetical protein OsJ_24455 [Oryza sativa Japonica Group]
Length = 323
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/187 (67%), Positives = 147/187 (78%), Gaps = 3/187 (1%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAER 138
EIR+LWIGDLQYWMDE+YL+ FA G+ V +VKVIRNKQ+G EGYGFIEF S A AE
Sbjct: 126 EIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEY 185
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRA 196
L FNG M N +Q F+LNWAS GAGE+R DD P+HTIFVGDLA+DVTD ML+E F+
Sbjct: 186 ALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSMLEEAFKT 245
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS +GAKVV D++TGR+KGYGFVRFGDE+EQ RAMTEMNG STR MR+GPA NKK
Sbjct: 246 SYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRLGPAANKKN 305
Query: 257 VSGQQQY 263
+ QQ Y
Sbjct: 306 MGTQQTY 312
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + L F KV+ ++ +G ++GYGF+ F + A+
Sbjct: 129 SLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEYALA 188
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQ---SDDDPNNTTVFVGNLD 291
NG + + Q K ++ +S + +DD P +T +FVG+L
Sbjct: 189 NFNG----------------RMMLNVDQLFKLNWASSGAGERRAADDGPEHT-IFVGDLA 231
Query: 292 SIVTDEHLRELFS------QYGQLVHVKIPA-GKRCGFVQFADRSCAEEALRMLNGTQLG 344
S VTD L E F + ++V K+ K GFV+F D + A+ +NG L
Sbjct: 232 SDVTDSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLS 291
Query: 345 GQNIRL 350
+ +RL
Sbjct: 292 TRQMRL 297
>gi|322694638|gb|EFY86462.1| mRNA binding post-transcriptional regulator [Metarhizium acridum
CQMa 102]
Length = 384
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/326 (43%), Positives = 190/326 (58%), Gaps = 31/326 (9%)
Query: 63 PQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQ 121
P + AVPP G TLW+G+L+ WMDE ++ F + GE V VKVIR+K +G
Sbjct: 9 PASDMAAVPPPAGGPEQPKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGN 68
Query: 122 IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVG 179
GY F+EF + A + L NGTP+PN + F+LNWAS G ++RDD P+++IFVG
Sbjct: 69 -AGYCFVEFTTPEAATKAL-GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVG 126
Query: 180 DLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
DL +V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV
Sbjct: 127 DLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGV 186
Query: 240 FCSTRPMRIGPATNKKTV--------------------------SGQQQYPKASYQNSQV 273
+C RPMRI AT K G Q +P Y +
Sbjct: 187 YCGNRPMRISTATPKNRGNHGFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYGGYNPATQ 246
Query: 274 AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEE 333
DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE
Sbjct: 247 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEM 306
Query: 334 ALRMLNGTQLGGQNIRLSWGRSPSNK 359
A+ + G +G +RLSWGRS +N
Sbjct: 307 AINQMQGYPIGNSRVRLSWGRSQNNS 332
>gi|171695760|ref|XP_001912804.1| hypothetical protein [Podospora anserina S mat+]
gi|170948122|emb|CAP60286.1| unnamed protein product [Podospora anserina S mat+]
Length = 390
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 192/313 (61%), Gaps = 22/313 (7%)
Query: 67 GVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGY 125
G A P Q +TLW+G+++ WMDE ++ F++T E V VKVIR++ +G GY
Sbjct: 26 GFASPSQMPAPSEAAKTLWMGEMEPWMDENFIKNVFSNTSAENVQVKVIRDRNSGN-AGY 84
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAA 183
F+EF + A++ L NGTP+PN ++ F+LNWAS G ++RDD P+++IFVGDL
Sbjct: 85 CFVEFSTPEAAQKAL-ALNGTPVPNSQRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGP 143
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+V +++L F++R+PS K AK++ D +TG+++GYGFVRF DES+Q RA+ EM GV+C
Sbjct: 144 EVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESDQQRALVEMQGVYCGN 203
Query: 244 RPMRIGPATNKKT-----VSGQQ------------QYPKASYQNSQVAQSDDDPNNTTVF 286
RPMRI AT K V G Q P A + Q DPNNTTVF
Sbjct: 204 RPMRISTATPKTRYMMPPVPGAQAPMWGGVPPYGYAQPAAPFNPMQPMNQFTDPNNTTVF 263
Query: 287 VGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
VG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 264 VGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNS 323
Query: 347 NIRLSWGRSPSNK 359
+RLSWGRS +N
Sbjct: 324 RVRLSWGRSQNNS 336
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 43 MMPPQPQAQPPAMWATQA----AAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYL 98
MMPP P AQ P MW A P A + P Q T+++G L ++ E L
Sbjct: 218 MMPPVPGAQAP-MWGGVPPYGYAQPAAPFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDEL 276
Query: 99 NTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158
+ F GE+ VK+ K G GF++F+ R AE + G P+ G RL+
Sbjct: 277 RSFFQGFGEITYVKIPPGK------GCGFVQFVHRHAAEMAINQMQGYPI--GNSRVRLS 328
Query: 159 WA 160
W
Sbjct: 329 WG 330
>gi|322705595|gb|EFY97180.1| mRNA binding post-transcriptional regulator [Metarhizium anisopliae
ARSEF 23]
Length = 390
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/320 (43%), Positives = 188/320 (58%), Gaps = 31/320 (9%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGF 127
AVPP G TLW+G+L+ WMDE ++ F + GE V VKVIR+K +G GY F
Sbjct: 15 AVPPPAGGPEQPKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGN-AGYCF 73
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADV 185
+EF + A + L NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V
Sbjct: 74 VEFTTPEAATKAL-GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEV 132
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV+C RP
Sbjct: 133 NEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRP 192
Query: 246 MRIGPATNKKTV--------------------------SGQQQYPKASYQNSQVAQSDDD 279
MRI AT K G Q +P Y + D
Sbjct: 193 MRISTATPKNRGNHGFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYGGYNPATQMNQFTD 252
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 339
PNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ +
Sbjct: 253 PNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQ 312
Query: 340 GTQLGGQNIRLSWGRSPSNK 359
G +G +RLSWGRS +N
Sbjct: 313 GYPIGNSRVRLSWGRSQNNS 332
>gi|325183868|emb|CCA18326.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 429
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 200/341 (58%), Gaps = 33/341 (9%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +TLW+GD+Q DE Y+ + FA E ++K+IR+K TG GYGF+EF S+ GA+ V
Sbjct: 4 DCKTLWMGDIQLNWDEAYIGSLFASAVEQPSIKLIRDKVTGYPAGYGFLEFPSQQGAQAV 63
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
L TFNG +PN FRLNW GAG +R DT DH+IFVGDLA +V+D +L TF R+
Sbjct: 64 LNTFNGQIVPNTIHRFRLNW---GAGGRRIDTVEDHSIFVGDLAPEVSDELLLSTFSTRF 120
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S +GAKVVID +T KG+GFVRFGD+ E +A+ MNGV+CS+RPMR+ AT++
Sbjct: 121 SSVRGAKVVIDPVTRMPKGFGFVRFGDKGEADQALQTMNGVYCSSRPMRVSVATDRTKTR 180
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
G P SY ++++ NTTVF+G LD T++ LR F G+++ VK+P G+
Sbjct: 181 GIMP-PPISYTVVGTGNTEEEGANTTVFIGGLDPSTTEDDLRARFGVIGEIMSVKVPPGR 239
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA----------------- 361
CGFVQ+ + A+ A+ +NG + G +R +WGRS + + A
Sbjct: 240 GCGFVQYVTKDAADVAINQMNGALINGVKVRCAWGRSAAARLAGSTTPAAGYYQQYPYQQ 299
Query: 362 QPDPNQWNAGYY--GYAQGYENYGYAAAAPQDPSMYYGGYP 400
N + Y+ GYAQ +Y Y A YGGYP
Sbjct: 300 TAYQNAYGYNYFPQGYAQQPGSYAYNA---------YGGYP 331
>gi|212546039|ref|XP_002153173.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
gi|210064693|gb|EEA18788.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
Length = 392
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 209/367 (56%), Gaps = 33/367 (8%)
Query: 16 MAAHQYQYQ-QQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQ 74
M+ Y+YQ QQ P P+ M P PA +A P AA Q
Sbjct: 1 MSFQNYEYQNQQDGAASAGAPTPADTNMTGQADPS---PAPFAGTPGEPSAAA-----PQ 52
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRA 134
QG G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F++F S A
Sbjct: 53 QGGDGKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSAA 111
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQ 191
A + L + NGTPMPN + F+LNWA+ G A RD+ P+++IFVGDL +V +Y+L
Sbjct: 112 AAGKAL-SLNGTPMPNTTRAFKLNWATGGGLADRGRDERGPEYSIFVGDLGPEVNEYVLV 170
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C RPMRI A
Sbjct: 171 SLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTA 230
Query: 252 TNKKTVSGQQQ-----------YPKAS--------YQNSQVAQSDDDPNNTTVFVGNLDS 292
T K G YP A+ Y Q DPNNTTVFVG L
Sbjct: 231 TPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQPMNQFTDPNNTTVFVGGLSG 290
Query: 293 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSW
Sbjct: 291 YVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSW 350
Query: 353 GRSPSNK 359
GRS +N
Sbjct: 351 GRSQNNS 357
>gi|430812963|emb|CCJ29641.1| unnamed protein product [Pneumocystis jirovecii]
Length = 853
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 192/327 (58%), Gaps = 11/327 (3%)
Query: 43 MMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRT-LWIGDLQYWMDETYLNTC 101
++ P A P T +P Q GE +T LW+G+L+ W+DE ++
Sbjct: 27 IVAPSANASSPTFQTTNTTVQNVNNNQIPSSQSPLQGENKTALWMGELEPWVDEAFIRQV 86
Query: 102 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161
+ + GE V VK+IR+K +G GY F++F S A A + L + NGT +P + F+LNWAS
Sbjct: 87 WFNLGEQVNVKMIRDKFSGSNAGYCFVDFSSTAAASKAL-SLNGTIIPGTTRLFKLNWAS 145
Query: 162 FGAGEKRDDT--PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
G R D P+ +IFVGDL +V +Y+L F++RYPS K AK++ D ++G ++GYG
Sbjct: 146 GGGLTDRKDDREPEFSIFVGDLGPEVNEYLLVSLFQSRYPSCKSAKIMTDLVSGMSRGYG 205
Query: 220 FVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT--NKKTVSGQQQY-----PKASYQNSQ 272
FVRF DE +Q RA+TEM GV+C +RP+RI AT NK +S P Y Q
Sbjct: 206 FVRFSDEVDQRRALTEMQGVYCGSRPIRISTATPKNKPGMSHINMMHMGMSPLGYYGAPQ 265
Query: 273 VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAE 332
DPNNTTVFVG L S VT++ LR F +G++ +VKIP GK CGFVQF R AE
Sbjct: 266 PMNQFTDPNNTTVFVGGLSSFVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 325
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNK 359
A+ + G +G +RLSWGRS +N
Sbjct: 326 MAISQMQGYPIGNSRVRLSWGRSQNNS 352
>gi|378727642|gb|EHY54101.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 398
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 208/368 (56%), Gaps = 47/368 (12%)
Query: 24 QQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRT 83
QQ+A P Q PPPQ P QP P A +P A P Q G GE +T
Sbjct: 12 QQEAAPGQIPPPQDG----AAPGQP-TDPSAQQQMAFQSPDPNVNAAP--QPGSGGEQKT 64
Query: 84 -LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G+L+ W+DE ++ + GE V+VK+IR+K +G GY F++F S A + LQ
Sbjct: 65 TLWMGELEPWIDENFVRNLWFQMGEQVSVKMIRDKFSGSNAGYCFVDFSSPQAAAKALQ- 123
Query: 143 FNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPS 200
+G PMPN + F+LNWA+ G ++RDD P+++IFVGDL +V +Y+L F++R+PS
Sbjct: 124 LSGQPMPNSTRPFKLNWATGGGLADRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPS 183
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT---- 256
K AK++ D L+G ++GYGFVRF DE +Q RA+TEM GV+C RPMRI AT K
Sbjct: 184 CKSAKIMTDPLSGMSRGYGFVRFSDEGDQQRALTEMQGVYCGNRPMRISTATPKNKGLPM 243
Query: 257 -------------------------VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
GQQQ P+ Q + DPNNTTVFVG L
Sbjct: 244 QGANMGMPGPAGPMGYPPMGGPPMPYYGQQQTPQPMNQFT-------DPNNTTVFVGGLS 296
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 297 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLS 356
Query: 352 WGRSPSNK 359
WGRS +N
Sbjct: 357 WGRSQNNS 364
>gi|303315831|ref|XP_003067920.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107596|gb|EER25775.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320032017|gb|EFW13973.1| mRNA binding post-transcriptional regulator [Coccidioides posadasii
str. Silveira]
gi|392867443|gb|EAS29326.2| mRNA binding post-transcriptional regulator [Coccidioides immitis
RS]
Length = 400
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 196/339 (57%), Gaps = 29/339 (8%)
Query: 44 MPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFA 103
M QP A P Q AP A A QQ G+ TLW+G+L+ W+DE ++ +
Sbjct: 33 MTGQPDATAPGF---QGPAPGEASAAPGGQQSGE--GKTTLWMGELEPWIDENFIRNIWY 87
Query: 104 HTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG 163
GE V VK+IR+K +G GY F++F + A A + L + NGTPMPN + F+LNWA+ G
Sbjct: 88 QMGEQVNVKMIRDKFSGSNAGYCFVDFATPAAAAKAL-SVNGTPMPNTNRPFKLNWATGG 146
Query: 164 AGEKR---DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGF 220
R D TP+++IFVGDL +V +Y+L F++R+PS K AK++ D ++G ++GYGF
Sbjct: 147 GLSDRSREDRTPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGF 206
Query: 221 VRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT----VSGQQQYPKAS--------- 267
VRF DE++Q RA+TEM GV+C RPMRI AT K GQ P A
Sbjct: 207 VRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGPSGAPGQMGMPGAPPAGMYPPAM 266
Query: 268 -------YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 320
Y Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK C
Sbjct: 267 GGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGC 326
Query: 321 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
GFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 327 GFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 365
>gi|119177688|ref|XP_001240593.1| hypothetical protein CIMG_07756 [Coccidioides immitis RS]
Length = 401
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 196/339 (57%), Gaps = 29/339 (8%)
Query: 44 MPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFA 103
M QP A P Q AP A A QQ G+ TLW+G+L+ W+DE ++ +
Sbjct: 33 MTGQPDATAPGF---QGPAPGEASAAPGGQQSGE--GKTTLWMGELEPWIDENFIRNIWY 87
Query: 104 HTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG 163
GE V VK+IR+K +G GY F++F + A A + L + NGTPMPN + F+LNWA+ G
Sbjct: 88 QMGEQVNVKMIRDKFSGSNAGYCFVDFATPAAAAKAL-SVNGTPMPNTNRPFKLNWATGG 146
Query: 164 AGEKR---DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGF 220
R D TP+++IFVGDL +V +Y+L F++R+PS K AK++ D ++G ++GYGF
Sbjct: 147 GLSDRSREDRTPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGF 206
Query: 221 VRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT----VSGQQQYPKAS--------- 267
VRF DE++Q RA+TEM GV+C RPMRI AT K GQ P A
Sbjct: 207 VRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGPSGAPGQMGMPGAPPAGMYPPAM 266
Query: 268 -------YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 320
Y Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK C
Sbjct: 267 GGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGC 326
Query: 321 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
GFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 327 GFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 365
>gi|391868084|gb|EIT77307.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 395
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/310 (44%), Positives = 187/310 (60%), Gaps = 25/310 (8%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
V P Q+G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F++
Sbjct: 56 VQPAQEGK----TTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD 111
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVT 186
F S A A + L + NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V
Sbjct: 112 FSSPAAAAKAL-SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVN 170
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
+Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C RPM
Sbjct: 171 EYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPM 230
Query: 247 RIGPATNKKTVSGQQQY-----------------PKASYQNSQVAQSDDDPNNTTVFVGN 289
RI AT K G P Y Q DPNNTTVFVG
Sbjct: 231 RISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGG 290
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 349
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +R
Sbjct: 291 LSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVR 350
Query: 350 LSWGRSPSNK 359
LSWGRS +N
Sbjct: 351 LSWGRSQNNS 360
>gi|83774240|dbj|BAE64365.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 488
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/310 (44%), Positives = 187/310 (60%), Gaps = 25/310 (8%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
V P Q+G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F++
Sbjct: 56 VQPAQEGK----TTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD 111
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVT 186
F S A A + L + NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V
Sbjct: 112 FSSPAAAAKAL-SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVN 170
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
+Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C RPM
Sbjct: 171 EYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPM 230
Query: 247 RIGPATNKKTVSGQQQY-----------------PKASYQNSQVAQSDDDPNNTTVFVGN 289
RI AT K G P Y Q DPNNTTVFVG
Sbjct: 231 RISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGG 290
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 349
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +R
Sbjct: 291 LSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVR 350
Query: 350 LSWGRSPSNK 359
LSWGRS +N
Sbjct: 351 LSWGRSQNNS 360
>gi|302420775|ref|XP_003008218.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
gi|261353869|gb|EEY16297.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
Length = 430
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 146/340 (42%), Positives = 189/340 (55%), Gaps = 43/340 (12%)
Query: 61 AAPQAAGVAVPPQQQ-------GQPGEIRTLWIGDLQYWMDETYLNTCFAH-TGEVVAVK 112
P AAG+ PP G TLW+G+L+ WMDE ++ FA TGE V VK
Sbjct: 23 GTPVAAGMGYPPNANELTGPGNSPDGNKTTLWMGELEPWMDENFIKGVFATATGEQVNVK 82
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT 171
VIR+K +G GY F+EF S A + L NGTP+PN + F+LNWAS G ++RDD
Sbjct: 83 VIRDKSSGN-AGYCFVEFNSTDAASKAL-ALNGTPVPNSARMFKLNWASGGGINDRRDDR 140
Query: 172 -PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
P+ +IFVGDL +V +++L F+AR+PS K AK++ D +TG+++GYGFVRF DE +Q
Sbjct: 141 GPEFSIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQ 200
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSG------------------------------- 259
RA+ EM GV+C RPMRI AT K G
Sbjct: 201 RALVEMQGVYCGNRPMRISTATPKNRNHGPYGAQQGHQMPPAMHPHQPQAFYGVPPGPQF 260
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
Q Y A Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK
Sbjct: 261 NQGYGAAPQFQQQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 320
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 321 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 360
>gi|346977902|gb|EGY21354.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
dahliae VdLs.17]
Length = 418
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 146/340 (42%), Positives = 189/340 (55%), Gaps = 43/340 (12%)
Query: 61 AAPQAAGVAVPPQQQ-------GQPGEIRTLWIGDLQYWMDETYLNTCFAH-TGEVVAVK 112
P AAG+ PP G TLW+G+L+ WMDE ++ FA TGE V VK
Sbjct: 23 GTPVAAGMGYPPNANELTGPGNSPDGNKTTLWMGELEPWMDENFIKGVFATATGEQVNVK 82
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT 171
VIR+K +G GY F+EF S A + L NGTP+PN + F+LNWAS G ++RDD
Sbjct: 83 VIRDKSSGN-AGYCFVEFNSTDAASKAL-ALNGTPVPNSARMFKLNWASGGGINDRRDDR 140
Query: 172 -PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
P+ +IFVGDL +V +++L F+AR+PS K AK++ D +TG+++GYGFVRF DE +Q
Sbjct: 141 GPEFSIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQ 200
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSG------------------------------- 259
RA+ EM GV+C RPMRI AT K G
Sbjct: 201 RALVEMQGVYCGNRPMRISTATPKNRNHGPYGAQQGHQMPPAMHPHQPQAFYGVPPGPQF 260
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
Q Y A Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK
Sbjct: 261 NQGYGAAPQFQQQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 320
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 321 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 360
>gi|400600479|gb|EJP68153.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 410
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 187/318 (58%), Gaps = 29/318 (9%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGF 127
A PP Q TLW+G+L+ WMDE ++ F + +GE V VKVIR+K +G GY F
Sbjct: 35 APPPTGSSQDQAKTTLWMGELEPWMDENFIKGVFLSASGETVNVKVIRDKNSGN-AGYCF 93
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADV 185
+EF + A + L NG P+PN + F+LNWAS G ++RDD P+++IFVGDL +V
Sbjct: 94 VEFQTADAATKAL-GLNGNPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEV 152
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV+C RP
Sbjct: 153 NEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRP 212
Query: 246 MRIGPATNKKTV------------------------SGQQQYPKASYQNSQVAQSDDDPN 281
MRI AT K +G Q + Y + DPN
Sbjct: 213 MRISTATPKNRGNHGFGHGPHGGPMMGGGMPQQPMWNGMQGFAYGGYNPATQMNQFTDPN 272
Query: 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 341
NTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G
Sbjct: 273 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 332
Query: 342 QLGGQNIRLSWGRSPSNK 359
+G +RLSWGRS +N
Sbjct: 333 PIGNSRVRLSWGRSQNNS 350
>gi|302893889|ref|XP_003045825.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
gi|256726752|gb|EEU40112.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
Length = 408
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 191/322 (59%), Gaps = 32/322 (9%)
Query: 67 GVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGY 125
G PP GQ TLW+G+L+ WMDE ++ F + GE V VKVIR+K +G GY
Sbjct: 35 GAVAPPPGAGQEPPKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGN-AGY 93
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAA 183
F+EF S A + L NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL
Sbjct: 94 CFVEFQSPDAATKAL-GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGP 152
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV+C
Sbjct: 153 EVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGN 212
Query: 244 RPMRIGPATNK--------------------------KTVSGQQQYPKASYQNSQVAQSD 277
RPMRI AT K + +G Q + +Q+ Q
Sbjct: 213 RPMRISTATPKNRGNHGFGHGQHNGGPMMGGGVMPQQQMWNGAQGFYGGFNPATQMNQFT 272
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRM 337
D PNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+
Sbjct: 273 D-PNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQ 331
Query: 338 LNGTQLGGQNIRLSWGRSPSNK 359
+ G +G +RLSWGRS +N
Sbjct: 332 MQGYPIGNSRVRLSWGRSQNNS 353
>gi|261199113|ref|XP_002625958.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|239595110|gb|EEQ77691.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|327353834|gb|EGE82691.1| hypothetical protein BDDG_05635 [Ajellomyces dermatitidis ATCC
18188]
Length = 399
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 187/318 (58%), Gaps = 25/318 (7%)
Query: 65 AAGVAVPPQQQGQPGEIRT-LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE 123
A+G P Q Q GE +T LW+G+L+ W+DE ++ + GE V VK+IR+K +G
Sbjct: 48 ASGEPAPSSAQ-QGGEAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNA 106
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFVGD 180
GY F++F + A A + L T +GTP+PN + F+LNWAS G R + P+ +IFVGD
Sbjct: 107 GYCFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGD 165
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+
Sbjct: 166 LGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVY 225
Query: 241 CSTRPMRIGPATNKKTVSGQQQY-------------------PKASYQNSQVAQSDDDPN 281
C RPMRI AT K G P Y Q DPN
Sbjct: 226 CGNRPMRISTATPKNKGPGAGPGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFTDPN 285
Query: 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 341
NTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G
Sbjct: 286 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 345
Query: 342 QLGGQNIRLSWGRSPSNK 359
+G +RLSWGRS +N
Sbjct: 346 PIGNSRVRLSWGRSQNNS 363
>gi|240280986|gb|EER44489.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H143]
gi|325092520|gb|EGC45830.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H88]
Length = 399
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/306 (43%), Positives = 183/306 (59%), Gaps = 24/306 (7%)
Query: 77 QPGEIRT-LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
Q GE +T LW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F++F + A
Sbjct: 59 QAGEAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFTTPAA 118
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFVGDLAADVTDYMLQE 192
A + L T +GTP+PN + F+LNWAS G R + P+ +IFVGDL +V +Y+L
Sbjct: 119 AAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVS 177
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C RPMRI AT
Sbjct: 178 LFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTAT 237
Query: 253 NKKTVSGQQQY-------------------PKASYQNSQVAQSDDDPNNTTVFVGNLDSI 293
K +G P Y Q DPNNTTVFVG L
Sbjct: 238 PKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGY 297
Query: 294 VTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWG
Sbjct: 298 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 357
Query: 354 RSPSNK 359
RS +N
Sbjct: 358 RSQNNS 363
>gi|317155988|ref|XP_001825498.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
oryzae RIB40]
Length = 404
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 188/311 (60%), Gaps = 26/311 (8%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-GYGFI 128
V P Q+G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G+ GY F+
Sbjct: 56 VQPAQEGK----TTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFV 111
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADV 185
+F S A A + L + NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V
Sbjct: 112 DFSSPAAAAKAL-SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEV 170
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C RP
Sbjct: 171 NEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRP 230
Query: 246 MRIGPATNKKTVSGQQQY-----------------PKASYQNSQVAQSDDDPNNTTVFVG 288
MRI AT K G P Y Q DPNNTTVFVG
Sbjct: 231 MRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVG 290
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +
Sbjct: 291 GLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRV 350
Query: 349 RLSWGRSPSNK 359
RLSWGRS +N
Sbjct: 351 RLSWGRSQNNS 361
>gi|310798962|gb|EFQ33855.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 419
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/313 (44%), Positives = 186/313 (59%), Gaps = 38/313 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
TLW+G+L+ WMDE ++ F TGE V VKVIR+K +G GY F+EF S A + L
Sbjct: 60 TLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGN-AGYCFVEFTSSEAASKAL- 117
Query: 142 TFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
T NG+P+PN + F+LNWAS G ++RDD P+++IFVGDL +V +Y+L F+AR+P
Sbjct: 118 TLNGSPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 177
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S K AK++ D ++G+++GYGFVRF DE +Q RA+ EM GV+C RPMRI AT K G
Sbjct: 178 SCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRISTATPKNRNHG 237
Query: 260 ---QQQY---------------------PKASYQNS---------QVAQSDDDPNNTTVF 286
QQQ+ A Y + Q DPNNTTVF
Sbjct: 238 GPYQQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMNQFTDPNNTTVF 297
Query: 287 VGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
VG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 298 VGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNS 357
Query: 347 NIRLSWGRSPSNK 359
+RLSWGRS +N
Sbjct: 358 RVRLSWGRSQNNS 370
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 99/246 (40%), Gaps = 43/246 (17%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
D +T+++G+L + + ++ F KV+ D+ +G GY FV F
Sbjct: 55 DANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGNA-GYCFVEFTSSEAA 113
Query: 230 LRAMTEMNG--VFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
+A+T +NG V S R ++ A+ + DD ++FV
Sbjct: 114 SKALT-LNGSPVPNSNRAFKLNWASGGGIND----------------RRDDRGPEYSIFV 156
Query: 288 GNLDSIVTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNG 340
G+L V + L LF +++ KI + GFV+F D + AL + G
Sbjct: 157 GDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQG 216
Query: 341 TQLGGQNIRLSWGRSPSNK------QAQPDPNQWNA--------GYYGYAQGYENYGYAA 386
G + +R+S +P N+ Q Q NQ A G+YG + YG A
Sbjct: 217 VYCGNRPMRISTA-TPKNRNHGGPYQQQHHGNQMMAPGLPPHQQGFYGVPSPAQ-YGGAY 274
Query: 387 AAPQDP 392
AP +P
Sbjct: 275 GAPYNP 280
>gi|226292803|gb|EEH48223.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides brasiliensis Pb18]
Length = 400
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 185/321 (57%), Gaps = 25/321 (7%)
Query: 62 APQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQ 121
P + A QQG + TLW+G+L+ W+DE ++ + GE V VK+IR+K +G
Sbjct: 46 GPASGEAASGSAQQGGDAKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGS 104
Query: 122 IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFV 178
GY F++F S A A + L T +GTP+PN + F+LNWAS G R + P+ +IFV
Sbjct: 105 NAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFV 163
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM G
Sbjct: 164 GDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQG 223
Query: 239 VFCSTRPMRIGPATNKKTVSGQQQY--------------------PKASYQNSQVAQSDD 278
V+C RPMRI AT K G P Y Q
Sbjct: 224 VYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFT 283
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ +
Sbjct: 284 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 343
Query: 339 NGTQLGGQNIRLSWGRSPSNK 359
G +G +RLSWGRS +N
Sbjct: 344 QGYPIGNSRVRLSWGRSQNNS 364
>gi|258576821|ref|XP_002542592.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
gi|237902858|gb|EEP77259.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
Length = 399
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 137/309 (44%), Positives = 185/309 (59%), Gaps = 26/309 (8%)
Query: 76 GQPGE--IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISR 133
GQPG TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F++F +
Sbjct: 54 GQPGGEGKTTLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVDFATP 113
Query: 134 AGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFVGDLAADVTDYML 190
A A + L + NGTPMPN + F+LNWA+ G R D TP+++IFVGDL +V +Y+L
Sbjct: 114 AAAAKAL-SVNGTPMPNTNRPFKLNWATGGGLSDRNREDRTPEYSIFVGDLGPEVNEYVL 172
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C RPMRI
Sbjct: 173 VSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRIST 232
Query: 251 ATNKKTVSGQQ-------------QYPKAS-------YQNSQVAQSDDDPNNTTVFVGNL 290
AT K YP A Y Q DPNNTTVFVG L
Sbjct: 233 ATPKNKGPAGGPGQMGMPGAPPAGMYPPAMGGPPMGYYGTPQPMNQFTDPNNTTVFVGGL 292
Query: 291 DSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 350
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RL
Sbjct: 293 SGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRL 352
Query: 351 SWGRSPSNK 359
SWGRS +N
Sbjct: 353 SWGRSQNNS 361
>gi|296412343|ref|XP_002835884.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629680|emb|CAZ80041.1| unnamed protein product [Tuber melanosporum]
Length = 412
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 187/312 (59%), Gaps = 28/312 (8%)
Query: 60 AAAPQAAGVAVPPQQQGQPGEI------RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKV 113
+A+P A PP G TLW+G+L+ W+DE ++ + GE V VK+
Sbjct: 16 SASPTGASAGGPPPTAGSSNGAAGSDAKTTLWMGELEPWIDEAFVRNVWYQLGEGVNVKM 75
Query: 114 IRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT- 171
IR+K +G GY F++F S A A + L T N TP+P + F+LNWAS G ++RDD
Sbjct: 76 IRDKFSGN-AGYCFVDFSSPAAAAKAL-TLNATPIPGSSRPFKLNWASGGGLADRRDDRG 133
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P+++IFVGDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE +Q R
Sbjct: 134 PEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPVSGMSRGYGFVRFSDEMDQQR 193
Query: 232 AMTEMNGVFCSTRPMRIGPAT--NKKTVSG--QQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+TEM GV+C RPMRI AT NK G Q+ DPNNTTVFV
Sbjct: 194 ALTEMQGVYCGNRPMRISTATPKNKSATGGPPMNQF--------------TDPNNTTVFV 239
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
G L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 240 GGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSR 299
Query: 348 IRLSWGRSPSNK 359
+RLSWGRS +N
Sbjct: 300 VRLSWGRSQNNS 311
>gi|429854847|gb|ELA29832.1| mRNA binding post-transcriptional regulator, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 366
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 138/310 (44%), Positives = 184/310 (59%), Gaps = 35/310 (11%)
Query: 83 TLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
TLW+G+L+ WMDE ++ F TGE V VKVIR+K +G GY F+EF S A + LQ
Sbjct: 58 TLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGN-AGYCFVEFTSSDAASKALQ 116
Query: 142 TFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +Y+L F+AR+P
Sbjct: 117 -LNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 175
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S K AK++ D ++G+++GYGFVRF DE +Q RA+ EM GV+C RPMRI AT K G
Sbjct: 176 SCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRISTATPKNRNHG 235
Query: 260 QQQY---------------------PKASYQNS---------QVAQSDDDPNNTTVFVGN 289
Q+ A Y + Q DPNNTTVFVG
Sbjct: 236 PYQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMNQFTDPNNTTVFVGG 295
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 349
L VT++ LR F +G++ +V+IP GK CGFVQF R AE A+ + G +G +R
Sbjct: 296 LSGYVTEDELRSFFQGFGEITYVQIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVR 355
Query: 350 LSWGRSPSNK 359
LSWGRS +N
Sbjct: 356 LSWGRSQNNS 365
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 40/243 (16%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
D +T+++G+L + + ++ F KV+ D+ +G GY FV F
Sbjct: 53 DANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGNA-GYCFVEFTSSDAA 111
Query: 230 LRAMTEMNG--VFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
+A+ ++NG V S R ++ A+ + DD ++FV
Sbjct: 112 SKAL-QLNGTPVPNSNRAFKLNWASGGGIND----------------RRDDRGPEYSIFV 154
Query: 288 GNLDSIVTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNG 340
G+L V + L LF +++ KI + GFV+F D + AL + G
Sbjct: 155 GDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQG 214
Query: 341 TQLGGQNIRLSWGRSPSNKQAQPDPNQWN-----------AGYYGYAQGYENYGYAAAAP 389
G + +R+S +P N+ P + N G+YG + YG A AP
Sbjct: 215 VYCGNRPMRISTA-TPKNRNHGPYQHHGNQMMAPGLPPHQQGFYGVPSPAQ-YGGAYGAP 272
Query: 390 QDP 392
+P
Sbjct: 273 YNP 275
>gi|225680559|gb|EEH18843.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 400
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 185/321 (57%), Gaps = 25/321 (7%)
Query: 62 APQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQ 121
P + A QQG + TLW+G+L+ W+DE ++ + GE V VK+IR+K +G
Sbjct: 46 GPASGEAASGSAQQGGDAKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGS 104
Query: 122 IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFV 178
GY F++F S A A + L T +GTP+PN + F+LNWAS G R + P+ +IFV
Sbjct: 105 NAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFV 163
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM G
Sbjct: 164 GDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQG 223
Query: 239 VFCSTRPMRIGPATNKKTVSGQQQY--------------------PKASYQNSQVAQSDD 278
V+C RPMRI AT K G P Y Q
Sbjct: 224 VYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFT 283
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ +
Sbjct: 284 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 343
Query: 339 NGTQLGGQNIRLSWGRSPSNK 359
G +G +RLSWGRS +N
Sbjct: 344 QGYPIGNSRVRLSWGRSQNNS 364
>gi|295661580|ref|XP_002791345.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226280907|gb|EEH36473.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 400
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 185/321 (57%), Gaps = 25/321 (7%)
Query: 62 APQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQ 121
P + A QQG + TLW+G+L+ W+DE ++ + GE V VK+IR+K +G
Sbjct: 46 GPASGEAASGSAQQGGDAKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGS 104
Query: 122 IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFV 178
GY F++F S A A + L T +GTP+PN + F+LNWAS G R + P+ +IFV
Sbjct: 105 NAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFV 163
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM G
Sbjct: 164 GDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQG 223
Query: 239 VFCSTRPMRIGPATNKKTVSGQQQY--------------------PKASYQNSQVAQSDD 278
V+C RPMRI AT K G P Y Q
Sbjct: 224 VYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFT 283
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ +
Sbjct: 284 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 343
Query: 339 NGTQLGGQNIRLSWGRSPSNK 359
G +G +RLSWGRS +N
Sbjct: 344 QGYPIGNSRVRLSWGRSQNNS 364
>gi|115446801|ref|NP_001047180.1| Os02g0567900 [Oryza sativa Japonica Group]
gi|113536711|dbj|BAF09094.1| Os02g0567900, partial [Oryza sativa Japonica Group]
Length = 259
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 130/248 (52%), Positives = 168/248 (67%), Gaps = 10/248 (4%)
Query: 148 MPNGEQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKV 206
MPN ++ F+LNWAS+ GEKR + DH+IFVGDLA DVTD ML + F +Y S KGAKV
Sbjct: 3 MPNTDRAFKLNWASYSMGEKRAELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKV 62
Query: 207 VIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKA 266
+ID TGR++GYGFVRFGD++++ AMTEMNG +CSTRP+RIGPAT +
Sbjct: 63 IIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGAYCSTRPIRIGPAT--------PRRSSG 114
Query: 267 SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 326
+S QSD D N T++VG LD T++ LR+ F++YG L VKIP GK+CGFVQF
Sbjct: 115 DSGSSPPRQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFV 174
Query: 327 DRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAA 386
+R AEEAL+ LNG+ +G Q +RLSWGRSP++KQ++ D G Y Y YGYA+
Sbjct: 175 NRPDAEEALQGLNGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGMYYGTPFYGGYGYAS 234
Query: 387 AAPQDPSM 394
P P+M
Sbjct: 235 PLPH-PNM 241
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+++G L E L FA G++ +VK+ KQ GF++F++R AE LQ
Sbjct: 131 RTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQC------GFVQFVNRPDAEEALQ 184
Query: 142 TFNGTPMPNGEQNFRLNW 159
NG+ + G+Q RL+W
Sbjct: 185 GLNGSTI--GKQAVRLSW 200
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFI 131
+++ + ++++GDL + + L FA V KVI + TG+ GYGF+ F
Sbjct: 21 EKRAELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFG 80
Query: 132 SRAGAERVLQTFNGT-----PMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFVGDLAA 183
+ NG P+ G R + G+ R D+ + TI+VG L
Sbjct: 81 DDNDKTHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPPRQSDSDSTNRTIYVGGLDP 140
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+ T+ L++ F A+Y K+ + K GFV+F + + A+ +NG
Sbjct: 141 NATEDELRKAF-AKYGDLASVKIPV------GKQCGFVQFVNRPDAEEALQGLNGSTIGK 193
Query: 244 RPMRI 248
+ +R+
Sbjct: 194 QAVRL 198
>gi|380478379|emb|CCF43635.1| RNA recognition domain-containing protein, partial [Colletotrichum
higginsianum]
Length = 419
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 144/330 (43%), Positives = 191/330 (57%), Gaps = 41/330 (12%)
Query: 66 AGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEG 124
GV P QQ TLW+G+L+ WMDE ++ F TGE V VKVIR+K +G G
Sbjct: 46 GGVQAPNQQDANK---NTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGN-AG 101
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLA 182
Y F+EF S A + L NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL
Sbjct: 102 YCFVEFSSSDAASKAL-GLNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLG 160
Query: 183 ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCS 242
+V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE +Q RA+ EM GV+C
Sbjct: 161 PEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCG 220
Query: 243 TRPMRIGPAT--NKKTVSG--QQQYPK--------------------ASYQNSQVAQSD- 277
RPMRI AT N+ G QQ + A Y + A +
Sbjct: 221 NRPMRISTATPKNRSNHGGPYQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNP 280
Query: 278 --------DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRS 329
DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R
Sbjct: 281 PGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRH 340
Query: 330 CAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
AE A+ + G +G +RLSWGRS +N
Sbjct: 341 AAEMAINQMQGYPIGNSRVRLSWGRSQNNS 370
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 28/211 (13%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
D +T+++G+L + + ++ F KV+ D+ +G GY FV F
Sbjct: 55 DANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGNA-GYCFVEFSSSDAA 113
Query: 230 LRAMTEMNG--VFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
+A+ +NG V S R ++ A+ + DD ++FV
Sbjct: 114 SKALG-LNGTPVPNSNRAFKLNWASGGGIND----------------RRDDRGPEYSIFV 156
Query: 288 GNLDSIVTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNG 340
G+L V + L LF +++ KI + GFV+F D + AL + G
Sbjct: 157 GDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQG 216
Query: 341 TQLGGQNIRLSWGRSPSNKQAQPDPNQWNAG 371
G + +R+S +P N+ P Q + G
Sbjct: 217 VYCGNRPMRIST-ATPKNRSNHGGPYQQHHG 246
>gi|85115744|ref|XP_964924.1| hypothetical protein NCU00768 [Neurospora crassa OR74A]
gi|28926722|gb|EAA35688.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38636412|emb|CAE81949.1| related to polyadenylate-binding protein [Neurospora crassa]
Length = 491
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/308 (43%), Positives = 184/308 (59%), Gaps = 32/308 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+++ WMDE ++ F GE V VKVIR++ +G GY FIEF + A++ L
Sbjct: 43 KTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSGN-AGYCFIEFATPEAAQKAL 101
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAG-EKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +++L F++R+
Sbjct: 102 N-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRF 160
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-KTV 257
PS K AK++ D +TG+++GYGFVRF DE +Q RA+ EM GV+C RPMRI AT K +T
Sbjct: 161 PSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRISTATPKTRTH 220
Query: 258 SGQQQYPKAS--------------------------YQNSQVAQSDDDPNNTTVFVGNLD 291
P A+ + Q DPNNTTVFVG L
Sbjct: 221 QYGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLS 280
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 281 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLS 340
Query: 352 WGRSPSNK 359
WGRS +N
Sbjct: 341 WGRSQNNS 348
>gi|350295821|gb|EGZ76798.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 523
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/308 (43%), Positives = 184/308 (59%), Gaps = 32/308 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+++ WMDE ++ F GE V VKVIR++ +G GY FIEF + A++ L
Sbjct: 75 KTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSGN-AGYCFIEFATPEAAQKAL 133
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAG-EKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +++L F++R+
Sbjct: 134 N-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRF 192
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-KTV 257
PS K AK++ D +TG+++GYGFVRF DE +Q RA+ EM GV+C RPMRI AT K +T
Sbjct: 193 PSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRISTATPKTRTH 252
Query: 258 SGQQQYPKAS--------------------------YQNSQVAQSDDDPNNTTVFVGNLD 291
P A+ + Q DPNNTTVFVG L
Sbjct: 253 QYGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLS 312
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 313 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLS 372
Query: 352 WGRSPSNK 359
WGRS +N
Sbjct: 373 WGRSQNNS 380
>gi|336463751|gb|EGO51991.1| hypothetical protein NEUTE1DRAFT_149626 [Neurospora tetrasperma
FGSC 2508]
Length = 491
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/308 (43%), Positives = 184/308 (59%), Gaps = 32/308 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+++ WMDE ++ F GE V VKVIR++ +G GY FIEF + A++ L
Sbjct: 43 KTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSGN-AGYCFIEFATPEAAQKAL 101
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAG-EKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +++L F++R+
Sbjct: 102 N-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRF 160
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-KTV 257
PS K AK++ D +TG+++GYGFVRF DE +Q RA+ EM GV+C RPMRI AT K +T
Sbjct: 161 PSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRISTATPKTRTH 220
Query: 258 SGQQQYPKAS--------------------------YQNSQVAQSDDDPNNTTVFVGNLD 291
P A+ + Q DPNNTTVFVG L
Sbjct: 221 QYGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLS 280
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 281 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLS 340
Query: 352 WGRSPSNK 359
WGRS +N
Sbjct: 341 WGRSQNNS 348
>gi|119489215|ref|XP_001262859.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
gi|119411017|gb|EAW20962.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
Length = 417
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/311 (45%), Positives = 188/311 (60%), Gaps = 22/311 (7%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
A P QQG G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F+
Sbjct: 54 AAPVAQQGNEGKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFV 112
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADV 185
+F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V
Sbjct: 113 DFASPAAAAKALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEV 171
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+Y+L F+ R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C RP
Sbjct: 172 NEYVLVSLFQNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRP 231
Query: 246 MRIGPATNKK----TVSGQQQYPKAS-------------YQNSQVAQSDDDPNNTTVFVG 288
MRI AT K V G P + Y Q DPNNTTVFVG
Sbjct: 232 MRISTATPKNKGPGVVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVG 291
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +
Sbjct: 292 GLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRV 351
Query: 349 RLSWGRSPSNK 359
RLSWGRS +N
Sbjct: 352 RLSWGRSQNNS 362
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAV 111
P M+ A P A P Q T+++G L ++ E L + F GE+ V
Sbjct: 256 PAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYV 315
Query: 112 KVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
K+ K G GF++F+ R AE + G P+ G RL+W
Sbjct: 316 KIPPGK------GCGFVQFVQRHAAEMAINQMQGYPI--GNSRVRLSWG 356
>gi|340521165|gb|EGR51400.1| RNA-binding protein [Trichoderma reesei QM6a]
Length = 441
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/374 (39%), Positives = 206/374 (55%), Gaps = 45/374 (12%)
Query: 29 PQQQPPPQPSPYMMMMPPQP-----QAQPPAMWATQAAAPQAAGVAV--PPQQQGQPGEI 81
P++ P P ++ P P Q + + Q P A ++V PP Q
Sbjct: 8 PEEASQLTPRPLHLLNSPFPGPDANQTSGSSPMSYQNGTPPATDMSVVPPPTGPTQDQAK 67
Query: 82 RTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
TLW+G+L+ WMDE ++ F + GE V VKVIR+K +G GY F+EF + A + L
Sbjct: 68 TTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGN-AGYCFVEFATPDAATKAL 126
Query: 141 QTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +Y+L F+AR+
Sbjct: 127 -GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARF 185
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV+C RPMRI AT K +
Sbjct: 186 PSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGN 245
Query: 259 ------------------------GQQQYP---------KASYQNSQVAQSDDDPNNTTV 285
G Q +P ++ + DPNNTTV
Sbjct: 246 HGFGHGHQGGPMMGGGMPQQQMWGGVQAFPYGGGGAAAAGGNFNPATQMNQFTDPNNTTV 305
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
FVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 306 FVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGN 365
Query: 346 QNIRLSWGRSPSNK 359
+RLSWGRS +N
Sbjct: 366 SRVRLSWGRSQNNS 379
>gi|121709146|ref|XP_001272322.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
gi|119400471|gb|EAW10896.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
Length = 417
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/311 (45%), Positives = 186/311 (59%), Gaps = 22/311 (7%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
A P QQG G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F+
Sbjct: 54 AAPVSQQGSDGKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFV 112
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADV 185
+F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V
Sbjct: 113 DFASPAAAAKALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEV 171
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+Y+L F+ R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C RP
Sbjct: 172 NEYVLVSLFQNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRP 231
Query: 246 MRIGPATNKKTVSGQQQY-----------------PKASYQNSQVAQSDDDPNNTTVFVG 288
MRI AT K G P Y Q DPNNTTVFVG
Sbjct: 232 MRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVG 291
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +
Sbjct: 292 GLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRV 351
Query: 349 RLSWGRSPSNK 359
RLSWGRS +N
Sbjct: 352 RLSWGRSQNNS 362
>gi|42571787|ref|NP_973984.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|332194052|gb|AEE32173.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 310
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/220 (58%), Positives = 157/220 (71%), Gaps = 8/220 (3%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE--VVAVKVIRNKQTGQIEGYGFIEF 130
Q GE +T+W+GDL +WMDE YLN+ FA E +V+VKVIRNK G EGYGF+EF
Sbjct: 92 HQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEF 151
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDY 188
S A++VL+ FNGT MPN +Q FRLNWASF GEKR ++ PD +IFVGDL+ DV+D
Sbjct: 152 ESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDN 211
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
+L ETF +YPS K AKVV+D TGR+KGYGFVRFGDE+E+ +AMTEMNGV CS+R MRI
Sbjct: 212 LLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRI 271
Query: 249 GPATNKKTVSGQQQYPKASYQ-NSQVAQSDDDPNNTTVFV 287
GPAT +KT QQQ Y N + + + D NTTV V
Sbjct: 272 GPATPRKTNGYQQQ---GGYMPNGTLTRPEGDIMNTTVIV 308
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 26/186 (13%)
Query: 175 TIFVGDLAADVTDYMLQETFRA-RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
TI+VGDL + + L +F + KV+ ++ G ++GYGFV F + +
Sbjct: 102 TIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVL 161
Query: 234 TEMNGVFC--STRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
E NG + +P R+ AS+ + ++ P+ ++FVG+L
Sbjct: 162 REFNGTTMPNTDQPFRLN---------------WASFSTGEKRLENNGPD-LSIFVGDLS 205
Query: 292 SIVTDEHLRELFSQ-YGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLG 344
V+D L E FS+ Y + K+ K GFV+F D + +A+ +NG +
Sbjct: 206 PDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCS 265
Query: 345 GQNIRL 350
+ +R+
Sbjct: 266 SRAMRI 271
>gi|336275731|ref|XP_003352619.1| hypothetical protein SMAC_01453 [Sordaria macrospora k-hell]
gi|380094509|emb|CCC07889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 517
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/308 (43%), Positives = 184/308 (59%), Gaps = 32/308 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+++ WMDE ++ F GE V VKVIR++ +G GY FIEF S A++ L
Sbjct: 43 KTLWMGEMEGWMDENFIKNVFTTVLGENVQVKVIRDRNSGN-AGYCFIEFASAEAAQKAL 101
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAG-EKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +++L F++R+
Sbjct: 102 N-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRF 160
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-KTV 257
PS K AK++ D +TG+++GYGFVRF DE +Q RA+ EM GV+C RPMRI AT K +T
Sbjct: 161 PSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRISTATPKTRTH 220
Query: 258 SGQQQYPKAS--------------------------YQNSQVAQSDDDPNNTTVFVGNLD 291
P A+ + Q DPNNTTVFVG L
Sbjct: 221 QYGAHAPHAANAMMAPVPAHAANMQWGVPPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLS 280
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 281 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLS 340
Query: 352 WGRSPSNK 359
WGRS +N
Sbjct: 341 WGRSQNNS 348
>gi|238498926|ref|XP_002380698.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
gi|220693972|gb|EED50317.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
Length = 427
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/308 (43%), Positives = 183/308 (59%), Gaps = 27/308 (8%)
Query: 78 PGEIRTLWI------GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P + T+W+ G+L+ W+DE ++ + GE V VK+IR+K +G GY F++F
Sbjct: 78 PSWLGTIWLTVNVRMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFS 137
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDY 188
S A A + L + NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V +Y
Sbjct: 138 SPAAAAKAL-SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEY 196
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C RPMRI
Sbjct: 197 VLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRI 256
Query: 249 GPATNKKTVSGQQQY-----------------PKASYQNSQVAQSDDDPNNTTVFVGNLD 291
AT K G P Y Q DPNNTTVFVG L
Sbjct: 257 STATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLS 316
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 317 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLS 376
Query: 352 WGRSPSNK 359
WGRS +N
Sbjct: 377 WGRSQNNS 384
>gi|389643224|ref|XP_003719244.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|351639013|gb|EHA46877.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|440462667|gb|ELQ32668.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae Y34]
gi|440489843|gb|ELQ69456.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae P131]
Length = 415
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 136/318 (42%), Positives = 184/318 (57%), Gaps = 44/318 (13%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+L+ WMDE ++ ++ GE V VKVIR++Q+G GY F+EF S A + L
Sbjct: 47 KTLWMGELEPWMDENFIKQIWSTVCGETVNVKVIRDRQSGN-AGYCFVEFPSSEAATKAL 105
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDT--PDHTIFVGDLAADVTDYMLQETFRARY 198
NG+P+PN ++ F+LNWAS G R D P+++IFVGDL +V +++L F+AR+
Sbjct: 106 -GLNGSPVPNSQRVFKLNWASGGGLVDRRDERGPEYSIFVGDLGPEVNEFVLVSLFQARF 164
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS K AK++ D +TG+++GYGFVRF DES+Q RA+ EM GV+C RPMRI AT K
Sbjct: 165 PSCKSAKIMTDAMTGQSRGYGFVRFTDESDQQRALVEMQGVYCGNRPMRISTATPK--TR 222
Query: 259 GQQQY------------------------------------PKASYQN-SQVAQSDDDPN 281
QQY P ++ N Q DPN
Sbjct: 223 SHQQYGNQGPHGAGPMNMTPPAQNMQWGMNPYGYQQPQAPPPNTAFNNPMQPMNQFTDPN 282
Query: 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 341
NTTVFVG L VT++ LR F +G + +VKIP GK CGFVQF R AE A+ + G
Sbjct: 283 NTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 342
Query: 342 QLGGQNIRLSWGRSPSNK 359
+G +RLSWGRS +N
Sbjct: 343 PIGNSRVRLSWGRSQNNS 360
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 98/246 (39%), Gaps = 40/246 (16%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G+L + + +++ + T KV+ DR +G GY FV F +A+
Sbjct: 48 TLWMGELEPWMDENFIKQIWSTVCGETVNVKVIRDRQSGNA-GYCFVEFPSSEAATKAL- 105
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNS--QVAQSDDDPNNTTVFVGNLDS 292
N V Q+ K ++ + V + D+ ++FVG+L
Sbjct: 106 ----------------GLNGSPVPNSQRVFKLNWASGGGLVDRRDERGPEYSIFVGDLGP 149
Query: 293 IVTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGG 345
V + L LF +++ KI + GFV+F D S + AL + G G
Sbjct: 150 EVNEFVLVSLFQARFPSCKSAKIMTDAMTGQSRGYGFVRFTDESDQQRALVEMQGVYCGN 209
Query: 346 QNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNY 405
+ +R+S + Q YG QG G P +M +G P YG Y
Sbjct: 210 RPMRISTATPKTRSHQQ----------YG-NQGPHGAGPMNMTPPAQNMQWGMNP-YG-Y 256
Query: 406 QQPQQP 411
QQPQ P
Sbjct: 257 QQPQAP 262
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 25/154 (16%)
Query: 14 PPMAAHQYQYQQQAP----PQQQPPPQPSPYMMMMP---PQPQAQPPAMWATQAAAPQAA 66
P +HQ QY Q P P PP + M P QPQA PP A
Sbjct: 219 PKTRSHQ-QYGNQGPHGAGPMNMTPPAQNMQWGMNPYGYQQPQAPPPNT---------AF 268
Query: 67 GVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYG 126
+ P Q T+++G L ++ E L + F G++ VK+ K G G
Sbjct: 269 NNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPPGK------GCG 322
Query: 127 FIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
F++F+ R AE + G P+ G RL+W
Sbjct: 323 FVQFVHRHAAEMAINQMQGYPI--GNSRVRLSWG 354
>gi|346325712|gb|EGX95309.1| mRNA binding post-transcriptional regulator [Cordyceps militaris
CM01]
Length = 474
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 188/329 (57%), Gaps = 34/329 (10%)
Query: 63 PQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQ 121
P + ++ PP TLW+G+L+ WMDE ++ F + GE V VKVIR+K +G
Sbjct: 88 PPSGDMSAPPPTGSSDQSKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGN 147
Query: 122 IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVG 179
GY F+EF + A + L NG P+PN + F+LNWAS G ++RDD P+++IFVG
Sbjct: 148 -AGYCFVEFQNADAASKAL-GLNGNPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVG 205
Query: 180 DLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
DL +V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV
Sbjct: 206 DLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGV 265
Query: 240 FCSTRPMRIGPATNKK-----------------------------TVSGQQQYPKASYQN 270
+C RPMRI AT K +G Q + Y
Sbjct: 266 YCGNRPMRISTATPKNRGNHGFGHGHHGGGGPMMGGGMPQQQQQPMWNGMQGFAYGGYNP 325
Query: 271 SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSC 330
+ DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R
Sbjct: 326 ATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHA 385
Query: 331 AEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
AE A+ + G +G +RLSWGRS +N
Sbjct: 386 AEMAINQMQGYPIGNSRVRLSWGRSQNNS 414
>gi|413936668|gb|AFW71219.1| hypothetical protein ZEAMMB73_649152 [Zea mays]
Length = 483
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 137/261 (52%), Positives = 156/261 (59%), Gaps = 27/261 (10%)
Query: 30 QQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQ------------ 77
QQ PPPQ ++ P Q Q A PQ A PPQQ
Sbjct: 104 QQHPPPQYYQQALLQPWGQQQQYAAPPLQYPPPPQTQQYATPPQQYAPLPQQQYAPPPQQ 163
Query: 78 ------------PGEIRTLWIGDLQYWMDETYL--NTCFAHTGEVVAVKVIRNKQTGQIE 123
GE+RTLWIGDLQ+WMDE YL N A ++ +VK+IRNKQTG E
Sbjct: 164 QYAPSPYGTTPGSGEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSE 223
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLA 182
GYGFIEF SRA AE L FNG MPN E F+LNWAS G+KR D+ DHTIFVGDLA
Sbjct: 224 GYGFIEFSSRATAEHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDHTIFVGDLA 283
Query: 183 ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCS 242
DVTD ML++ FRA+YPS + A VV+DR+TG KGYGFVRFGD +EQ AMTEMNG+ S
Sbjct: 284 HDVTDSMLEDVFRAKYPSVRRANVVVDRMTGWPKGYGFVRFGDLNEQAHAMTEMNGMLLS 343
Query: 243 TRPMRIGPATNKKTVSGQQQY 263
TR MRIG NKK QQ Y
Sbjct: 344 TRQMRIGATANKKNRDAQQTY 364
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTD-YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFV 221
G+GE R T+++GDL + + Y+ F A K++ ++ TG ++GYGF+
Sbjct: 175 GSGEVR------TLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFI 228
Query: 222 RFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPN 281
F + + NG M + + AS + + D +
Sbjct: 229 EFSSRATAEHTLMNFNGQMMPNVEMTF-----------KLNWASASTGDKR----GDSGS 273
Query: 282 NTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVKIPAGKRCG------FVQFADRSCAEEA 334
+ T+FVG+L VTD L ++F ++Y + + + G FV+F D + A
Sbjct: 274 DHTIFVGDLAHDVTDSMLEDVFRAKYPSVRRANVVVDRMTGWPKGYGFVRFGDLNEQAHA 333
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ +NG L + +R+ + N+ AQ
Sbjct: 334 MTEMNGMLLSTRQMRIGATANKKNRDAQ 361
>gi|46122719|ref|XP_385913.1| hypothetical protein FG05737.1 [Gibberella zeae PH-1]
Length = 409
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 139/328 (42%), Positives = 190/328 (57%), Gaps = 33/328 (10%)
Query: 62 APQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTG-EVVAVKVIRNKQTG 120
AP GVA PP + TLW+G+L+ WMDE ++ F + E V VKVIR+K +G
Sbjct: 30 APDMGGVAPPPGSGPDSPKT-TLWMGELEPWMDENFIKGVFLSSAHENVNVKVIRDKNSG 88
Query: 121 QIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFV 178
GY F+EF S A + L NG+ +PN ++F+LNWAS G ++RDD P+++IFV
Sbjct: 89 N-AGYCFVEFQSPEAATKAL-NMNGSQVPNSSRSFKLNWASGGGLVDRRDDRGPEYSIFV 146
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL +V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM G
Sbjct: 147 GDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQG 206
Query: 239 VFCSTRPMRIGPATNKK---------------------------TVSGQQQYPKASYQNS 271
V+C RPMRI AT K G Q +P + +
Sbjct: 207 VYCGNRPMRISTATPKNRGNHGFGGQGHQHGGPMMPGMPQQQMWNGGGMQGFPYGGFNPA 266
Query: 272 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 331
DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R A
Sbjct: 267 TQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAA 326
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSNK 359
E A+ + G +G +RLSWGRS +N
Sbjct: 327 EMAINQMQGYPIGNSRVRLSWGRSQNNS 354
>gi|367053249|ref|XP_003657003.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
gi|347004268|gb|AEO70667.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
Length = 396
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 136/323 (42%), Positives = 188/323 (58%), Gaps = 31/323 (9%)
Query: 66 AGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEG 124
AG + Q +TLW+G+++ WMDE ++ F V V VKVIR++ +G G
Sbjct: 25 AGFSATSQMSASNEAAKTLWMGEMEGWMDENFIKNVFQTVLSVDVQVKVIRDRNSGN-AG 83
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLA 182
Y FIEF + A++ L T NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL
Sbjct: 84 YCFIEFPTPDAAQKAL-TLNGTPVPNSSRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLG 142
Query: 183 ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCS 242
+V +++L F++R+PS K AK++ D +TG+++GYGFVRF DESEQ RA+ EM GV+C
Sbjct: 143 PEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESEQQRALVEMQGVYCG 202
Query: 243 TRPMRIGPATNKKTVSGQQQYPKASYQ------------------------NSQVAQSD- 277
R MRI AT K + + Q N +A +
Sbjct: 203 NRAMRISTATPKSRSHQFGHHGHGATQMMPPIAGHPGPMWGVPSYYGQQPFNQHIAPMNQ 262
Query: 278 -DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALR 336
DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+
Sbjct: 263 FTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAIN 322
Query: 337 MLNGTQLGGQNIRLSWGRSPSNK 359
+ G +G +RLSWGRS +N
Sbjct: 323 QMQGYPIGNSRVRLSWGRSQNNS 345
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 64/162 (39%), Gaps = 25/162 (15%)
Query: 14 PPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQ 73
P +HQ+ + Q PP P M P Q P Q AP
Sbjct: 213 PKSRSHQFGHHGHGATQMMPPIAGHPGPMWGVPSYYGQQP---FNQHIAPM--------N 261
Query: 74 QQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISR 133
Q P T+++G L ++ E L + F GE+ VK+ K G GF++F+ R
Sbjct: 262 QFTDPNNT-TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVHR 314
Query: 134 AGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT 175
AE + G P+ G RL+W G ++++ HT
Sbjct: 315 HAAEMAINQMQGYPI--GNSRVRLSW-----GRSQNNSGVHT 349
>gi|320587473|gb|EFW99953.1| mRNA-binding post-transcriptional regulator [Grosmannia clavigera
kw1407]
Length = 399
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 186/312 (59%), Gaps = 36/312 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAH-TGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+L+ WMDE ++ F+ +GE V VKVIR++ +G GY F+EF + A + L
Sbjct: 42 KTLWMGELEPWMDENFVKNVFSTVSGEAVNVKVIRDRASGN-AGYCFVEFNTADAATKAL 100
Query: 141 QTFNGTPMPNGEQNFRLNWASFGA-GEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARY 198
T NG+P+PN + F+LNWAS G ++RDD +P+ +IFVGDL +V +++L F+AR+
Sbjct: 101 -TLNGSPVPNSTRAFKLNWASGGGLVDRRDDRSPEFSIFVGDLGPEVNEFVLVSLFQARF 159
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS K AK++ D +TG+++GYGFVRF DE++Q RA+ EM GV+C RPMRI AT K
Sbjct: 160 PSCKSAKIMTDAVTGQSRGYGFVRFSDETDQQRALVEMQGVYCGNRPMRISTATPKTRSH 219
Query: 259 --GQQQY-----------------------------PKASYQNSQVAQSDDDPNNTTVFV 287
GQ Q+ P Q DPNNTTVFV
Sbjct: 220 QYGQGQHGQHMPAHGPAQGNMGWGGMGNGGNGGYYQPGFGPMAPQPMNQFTDPNNTTVFV 279
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
G L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 280 GGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSR 339
Query: 348 IRLSWGRSPSNK 359
+RLSWGRS +N
Sbjct: 340 VRLSWGRSQNNS 351
>gi|340924065|gb|EGS18968.1| hypothetical protein CTHT_0055850 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 393
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/307 (43%), Positives = 185/307 (60%), Gaps = 31/307 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+++ WMDET++ F GE V VKVIR++ +G GY F+EF + A++ L
Sbjct: 41 KTLWMGEMEGWMDETFIKNVFQTVMGESVQVKVIRDRNSGN-AGYCFVEFQTPEAAQKAL 99
Query: 141 QTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +++L F++R+
Sbjct: 100 -GLNGTPVPNSNRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRF 158
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS K AK++ D +TG+++GYGFVRF DE++ RA+ EM GV+C RPMRI AT K+
Sbjct: 159 PSCKSAKIMTDAMTGQSRGYGFVRFSDEADMQRALVEMQGVYCGNRPMRISTATPKQRSH 218
Query: 259 GQQQ--------------YPKA------------SYQNSQVAQSDDDPNNTTVFVGNLDS 292
Q +P A Y Q DPNNTTVFVG L
Sbjct: 219 HHQYGHHPPAPMMPPVPGHPAAPPMWGNYPYYGQQYNPIQPMNQFTDPNNTTVFVGGLSG 278
Query: 293 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSW
Sbjct: 279 YVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSW 338
Query: 353 GRSPSNK 359
GRS +N
Sbjct: 339 GRSQNNS 345
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 105/265 (39%), Gaps = 39/265 (14%)
Query: 158 NWASFGAGEKRDDTPD--HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRT 215
N A+F A PD T+++G++ + + ++ F+ + KV+ DR +G
Sbjct: 23 NEANFSAPAPIAPNPDAPKTLWMGEMEGWMDETFIKNVFQTVMGESVQVKVIRDRNSGNA 82
Query: 216 KGYGFVRFGDESEQLRAMTEMNG--VFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQV 273
GY FV F +A+ +NG V S R ++ A+ V
Sbjct: 83 -GYCFVEFQTPEAAQKALG-LNGTPVPNSNRVFKLNWASGGGLVD--------------- 125
Query: 274 AQSDDDPNNTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFA 326
+ DD ++FVG+L V + L LF S++ KI + GFV+F+
Sbjct: 126 -RRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFS 184
Query: 327 DRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAA 386
D + + AL + G G + +R+S +P + YG+
Sbjct: 185 DEADMQRALVEMQGVYCGNRPMRISTA-TPKQRSHHHQ--------YGHHPPAPMMPPVP 235
Query: 387 AAPQDPSMYYGGYPGYGNYQQPQQP 411
P P M+ G YP YG P QP
Sbjct: 236 GHPAAPPMW-GNYPYYGQQYNPIQP 259
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 20/155 (12%)
Query: 6 PGAVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQA 65
P + P +H +QY P PP P A PP MW Q
Sbjct: 205 PMRISTATPKQRSHHHQYGHHPPAPMMPPVPGHP----------AAPP-MWGNYPYYGQQ 253
Query: 66 AGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY 125
P Q P T+++G L ++ E L + F GE+ VK+ K G
Sbjct: 254 YNPIQPMNQFTDPNNT-TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GC 306
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
GF++F+ R AE + G P+ G RL+W
Sbjct: 307 GFVQFVHRHAAEMAINQMQGYPI--GNSRVRLSWG 339
>gi|358380439|gb|EHK18117.1| hypothetical protein TRIVIDRAFT_117191, partial [Trichoderma virens
Gv29-8]
Length = 417
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 196/343 (57%), Gaps = 46/343 (13%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVA 110
PPA +A P AG P Q Q + TLW+G+L+ WMDE ++ F + GE V
Sbjct: 28 PPA--TDMSAVPPPAG---PTQDQAK----TTLWMGELEPWMDENFIKGVFLSAAGETVN 78
Query: 111 VKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRD 169
VKVIR+K +G GY F+EF + A + L NGTP+PN + F+LNWAS G ++RD
Sbjct: 79 VKVIRDKNSGN-AGYCFVEFATPDAATKAL-GLNGTPVPNSSRQFKLNWASGGGLVDRRD 136
Query: 170 DT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D P+++IFVGDL +V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++
Sbjct: 137 DRGPEYSIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDEND 196
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVS------------------------GQQQYP 264
Q RA+ EM GV+C RPMRI AT K + G Q +P
Sbjct: 197 QQRALVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQMWGGVQGFP 256
Query: 265 --------KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 316
+ + DPNNTTVFVG L VT++ LR F +G++ +VKIP
Sbjct: 257 YGGGAGAGGGGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPP 316
Query: 317 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
GK CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 317 GKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 359
>gi|367019444|ref|XP_003659007.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
gi|347006274|gb|AEO53762.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
Length = 396
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/308 (43%), Positives = 185/308 (60%), Gaps = 32/308 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+++ WMDE ++ F E V VKVIR++ +G GY FIEF + A++ L
Sbjct: 40 KTLWMGEMEGWMDENFIKNVFQTVLAENVQVKVIRDRHSGN-AGYCFIEFGTPEAAQKAL 98
Query: 141 QTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
+ NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +++L F++R+
Sbjct: 99 -SLNGTPVPNSTRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRF 157
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT-- 256
PS K AK++ D +TG+++GYGFVRF DE++Q RA+ EM GV+C RPMRI AT K
Sbjct: 158 PSCKSAKIMTDAMTGQSRGYGFVRFSDEADQQRALVEMQGVYCGNRPMRISTATPKTRSH 217
Query: 257 ----VSGQQQYPK---------------------ASYQNSQVAQSDDDPNNTTVFVGNLD 291
GQ P A++ Q DPNNTTVFVG L
Sbjct: 218 QYGGAHGQGANPMIPPVPGHPGPMWGAPAYYGQGAAFNPMQPMNQFTDPNNTTVFVGGLS 277
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 278 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLS 337
Query: 352 WGRSPSNK 359
WGRS +N
Sbjct: 338 WGRSQNNS 345
>gi|408392147|gb|EKJ71507.1| hypothetical protein FPSE_08320 [Fusarium pseudograminearum CS3096]
Length = 442
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 190/329 (57%), Gaps = 34/329 (10%)
Query: 62 APQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTG-EVVAVKVIRNKQTG 120
AP GVA PP + TLW+G+L+ WMDE ++ F + E V VKVIR+K +G
Sbjct: 30 APDMGGVAPPPGSGPDSPKT-TLWMGELEPWMDENFIKGVFLSSAHENVNVKVIRDKNSG 88
Query: 121 QIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFV 178
GY F+EF S A + L NG+ +PN ++F+LNWAS G ++RDD P+++IFV
Sbjct: 89 N-AGYCFVEFQSPEAATKAL-NMNGSQVPNSSRSFKLNWASGGGLVDRRDDRGPEYSIFV 146
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL +V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM G
Sbjct: 147 GDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQG 206
Query: 239 VFCSTRPMRIGPATNKK----------------------------TVSGQQQYPKASYQN 270
V+C RPMRI AT K G Q +P +
Sbjct: 207 VYCGNRPMRISTATPKNRGNHGFGGQGHQHGGPMMPGMPQQQQMWNGGGMQGFPYGGFNP 266
Query: 271 SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSC 330
+ DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R
Sbjct: 267 ATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHA 326
Query: 331 AEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
AE A+ + G +G +RLSWGRS +N
Sbjct: 327 AEMAINQMQGYPIGNSRVRLSWGRSQNNS 355
>gi|242824554|ref|XP_002488282.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713203|gb|EED12628.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 392
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 198/334 (59%), Gaps = 30/334 (8%)
Query: 49 QAQP-PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
QA P PA +A P AA QQG G+ TLW+G+L+ W+DE ++ + GE
Sbjct: 31 QADPSPAPFAGTPGEPSAAAT-----QQGGDGKT-TLWMGELEPWIDENFIRNLWFQMGE 84
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AG 165
V VK+IR+K +G GY F++F S A A + L NGTPMPN + F+LNWA+ G A
Sbjct: 85 QVNVKMIRDKFSGSNAGYCFVDFASPAAAAKALSL-NGTPMPNTTRAFKLNWATGGGLAD 143
Query: 166 EKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
RD+ P+++IFVGDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF
Sbjct: 144 RGRDERGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFS 203
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ-----------YPKAS------ 267
DE++Q RA++EM GV+C RPMRI AT K G YP A+
Sbjct: 204 DENDQQRALSEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPM 263
Query: 268 --YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 325
Y Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF
Sbjct: 264 GFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQF 323
Query: 326 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
R AE A+ + G +G +RLSWGRS +N
Sbjct: 324 VQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 357
>gi|242824548|ref|XP_002488281.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713202|gb|EED12627.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 393
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 198/334 (59%), Gaps = 30/334 (8%)
Query: 49 QAQP-PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
QA P PA +A P AA QQG G+ TLW+G+L+ W+DE ++ + GE
Sbjct: 31 QADPSPAPFAGTPGEPSAAAT-----QQGGDGKT-TLWMGELEPWIDENFIRNLWFQMGE 84
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AG 165
V VK+IR+K +G GY F++F S A A + L NGTPMPN + F+LNWA+ G A
Sbjct: 85 QVNVKMIRDKFSGSNAGYCFVDFASPAAAAKALSL-NGTPMPNTTRAFKLNWATGGGLAD 143
Query: 166 EKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
RD+ P+++IFVGDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF
Sbjct: 144 RGRDERGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFS 203
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ-----------YPKAS------ 267
DE++Q RA++EM GV+C RPMRI AT K G YP A+
Sbjct: 204 DENDQQRALSEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPM 263
Query: 268 --YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 325
Y Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF
Sbjct: 264 GFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQF 323
Query: 326 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
R AE A+ + G +G +RLSWGRS +N
Sbjct: 324 VQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 357
>gi|134079837|emb|CAK40970.1| unnamed protein product [Aspergillus niger]
Length = 402
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 188/313 (60%), Gaps = 23/313 (7%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
A P QQ G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F
Sbjct: 53 TAAPVPQQANEGKT-TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCF 111
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAAD 184
++F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +
Sbjct: 112 VDFASPAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPE 170
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C R
Sbjct: 171 VNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNR 230
Query: 245 PMRIGPATNKKT-----VSGQQQYPKAS-------------YQNSQVAQSDDDPNNTTVF 286
PMRI AT K +G P + Y Q DPNNTTVF
Sbjct: 231 PMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVF 290
Query: 287 VGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
VG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 291 VGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNS 350
Query: 347 NIRLSWGRSPSNK 359
+RLSWGRS +N
Sbjct: 351 RVRLSWGRSQNNS 363
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 27 APPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWI 86
A P+ + P + M MP P M+ A P A P Q T+++
Sbjct: 237 ATPKNKGPSLGAAGAMGMP-----GPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFV 291
Query: 87 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGT 146
G L ++ E L + F GE+ VK+ K G GF++F+ R AE + G
Sbjct: 292 GGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQMQGY 345
Query: 147 PMPNGEQNFRLNWA 160
P+ G RL+W
Sbjct: 346 PI--GNSRVRLSWG 357
>gi|414886902|tpg|DAA62916.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 308
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/188 (64%), Positives = 139/188 (73%), Gaps = 3/188 (1%)
Query: 79 GEIRTLWIGDLQYWMDETYL--NTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
GE+RTLWIGDLQ+WMDE YL N A ++ +VK+IRNKQTG EGYGFIEF SRA A
Sbjct: 111 GEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFIEFYSRAAA 170
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFR 195
E L FNG MPN E F+LNWAS G+KR D+ D TIFVGDLA DVTD ML++ FR
Sbjct: 171 EHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTDSMLEDVFR 230
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
A+YPS +GA VV+DR+TG KG+GFVRFGD +EQ RAMTEMNG+ STR MRIG A NKK
Sbjct: 231 AKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMRIGAAANKK 290
Query: 256 TVSGQQQY 263
QQ Y
Sbjct: 291 NRDAQQTY 298
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTD-YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFV 221
G+GE R T+++GDL + + Y+ F A K++ ++ TG ++GYGF+
Sbjct: 109 GSGEVR------TLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFI 162
Query: 222 RFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPN 281
F + + NG M + + AS + + D +
Sbjct: 163 EFYSRAAAEHTLMNFNGQMMPNVEMTF-----------KLNWASASTGDKR----GDSGS 207
Query: 282 NTTVFVGNLDSIVTDEHLRELF-----SQYGQLVHVKIPAG--KRCGFVQFADRSCAEEA 334
+ T+FVG+L VTD L ++F S G V V G K GFV+F D + A
Sbjct: 208 DRTIFVGDLAHDVTDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARA 267
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ +NG L + +R+ + N+ AQ
Sbjct: 268 MTEMNGMLLSTRQMRIGAAANKKNRDAQ 295
>gi|358374531|dbj|GAA91122.1| mRNA binding post-transcriptional regulator [Aspergillus kawachii
IFO 4308]
Length = 402
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 188/312 (60%), Gaps = 23/312 (7%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
A P QQ G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F+
Sbjct: 54 AAPVPQQANEGKT-TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFV 112
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADV 185
+F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V
Sbjct: 113 DFASPAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEV 171
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C RP
Sbjct: 172 NEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRP 231
Query: 246 MRIGPATNKKT-----VSGQQQYPKAS-------------YQNSQVAQSDDDPNNTTVFV 287
MRI AT K +G P + Y Q DPNNTTVFV
Sbjct: 232 MRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFV 291
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
G L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 292 GGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSR 351
Query: 348 IRLSWGRSPSNK 359
+RLSWGRS +N
Sbjct: 352 VRLSWGRSQNNS 363
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 27 APPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWI 86
A P+ + P + M MP P M+ A P A P Q T+++
Sbjct: 237 ATPKNKGPSLGAAGAMGMP-----GPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFV 291
Query: 87 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGT 146
G L ++ E L + F GE+ VK+ K G GF++F+ R AE + G
Sbjct: 292 GGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQMQGY 345
Query: 147 PMPNGEQNFRLNWA 160
P+ G RL+W
Sbjct: 346 PI--GNSRVRLSWG 357
>gi|402077003|gb|EJT72352.1| tRNA selenocysteine-associated protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 423
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/319 (42%), Positives = 184/319 (57%), Gaps = 43/319 (13%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAER 138
+ +TLW+G+L+ WMDE ++ + GE V VKVIR++Q+G GY F+EF S A +
Sbjct: 41 DAKTLWMGELEPWMDENFVKQVWQTVCGEAVNVKVIRDRQSGN-AGYCFVEFNSAEAANK 99
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT--PDHTIFVGDLAADVTDYMLQETFRA 196
LQ NG+P+PN ++ F+LNWAS G R D P+ +IFVGDL +V +++L F+A
Sbjct: 100 ALQ-LNGSPVPNSQRVFKLNWASGGGLVDRRDERGPEFSIFVGDLGPEVNEFVLVSLFQA 158
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
R+PS K AK++ D +TG+++GYGFVRF DE +Q RA+ EM GV+C RPMRI AT K
Sbjct: 159 RFPSCKSAKIMTDAMTGQSRGYGFVRFTDEGDQQRALLEMQGVYCGNRPMRISTATPK-- 216
Query: 257 VSGQQQY----------------------------------PKASYQNS--QVAQSDDDP 280
QQY P A+ N+ Q DP
Sbjct: 217 TRSHQQYSAQGQHGGPMPMAAPAQQQNMNWGMPYGFNQPAPPAANNFNAAMQPMNQFTDP 276
Query: 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 340
NNTTVFVG L VT++ LR F +G + +VKIP GK CGFVQF R AE A+ + G
Sbjct: 277 NNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPPGKGCGFVQFVHRHAAEMAINQMQG 336
Query: 341 TQLGGQNIRLSWGRSPSNK 359
+G +RLSWGRS +N
Sbjct: 337 YPIGNSRVRLSWGRSQNNS 355
>gi|348670884|gb|EGZ10705.1| hypothetical protein PHYSODRAFT_520170 [Phytophthora sojae]
Length = 390
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 174/267 (65%), Gaps = 14/267 (5%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +TLW+GD+Q DET++++ FA GE VK+IR+K TG GYGF+EF ++ GA++V
Sbjct: 4 ECKTLWMGDIQMHWDETFISSLFASAGEQPVVKLIRDKVTGYPAGYGFLEFPTQRGAQQV 63
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD-HTIFVGDLAADVTDYMLQETFRARY 198
L T+NG +PN FR+NW GAG +R +T D H+IFVGDLA DVTD +L TF +R+
Sbjct: 64 LDTYNGQVIPNTMHRFRMNW---GAGGRRIETSDDHSIFVGDLAPDVTDELLLSTFNSRF 120
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S +GAKVV+D +T +KG+GFVRFG + E +A+ MNGV+CS+RPMR+ AT +
Sbjct: 121 TSVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATER---- 176
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
S Q +++ NTTVFVG LD T++ LR F G++V VK+P G+
Sbjct: 177 ------SKSRQQGAFGAPEEEGTNTTVFVGGLDPSTTEDELRARFGALGEIVSVKVPPGR 230
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGG 345
CGFVQ+ + AE A+ +NGT + G
Sbjct: 231 GCGFVQYTSKEAAEVAITQMNGTVISG 257
>gi|440795338|gb|ELR16465.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 424
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 169/296 (57%), Gaps = 33/296 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTLW+GD+ WMDE Y+ F EV VK+IR+K TG GYGF+EF S GA RVL
Sbjct: 19 RTLWVGDIDRWMDENYIVALFGSAAEVANVKIIRDKMTGLPAGYGFVEFKSHEGAARVLN 78
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPS 200
FN P+P ++FRLNWA+FG +R +T P+ ++FVGDLA +++D LQ F ARY S
Sbjct: 79 DFNNVPIPGVGRSFRLNWATFGIAARRPETGPEFSLFVGDLAPEISDDQLQAFFGARYRS 138
Query: 201 TKGAKVVIDRLTGRTK----------------------GYGFVRFGDESEQLRAMTEMNG 238
+ AKVV D T ++ GYGFVRFGDE+E AMTEM G
Sbjct: 139 VRSAKVVTDAATAASRGTCSSAINKHLFSHFALLCSADGYGFVRFGDETECYSAMTEMQG 198
Query: 239 VFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDD----------DPNNTTVFVG 288
+ +R +R+ AT KK+ S DP+NTT+FVG
Sbjct: 199 MMLGSRALRLSQATPKKSSSMGGGMGMPMGMPMGGGGGGGGHSAPMPEQADPSNTTIFVG 258
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 344
NLDS V ++ LR F +G+LV+V++P GK CGFVQF RSCAE A+ ++G +G
Sbjct: 259 NLDSTVGEDELRGHFMPFGELVYVRVPPGKNCGFVQFVHRSCAENAMLRVHGKTIG 314
>gi|225562584|gb|EEH10863.1| RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 427
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 184/320 (57%), Gaps = 38/320 (11%)
Query: 77 QPGEIRT-LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE------------ 123
Q GE +T LW+G+L+ W+DE ++ + GE V VK+IR+K +G+
Sbjct: 59 QAGEAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGKQHESSRSNIDIPRS 118
Query: 124 --GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFV 178
GY F++F + A A + L T +GTP+PN + F+LNWAS G R + P+ +IFV
Sbjct: 119 NAGYCFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFV 177
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM G
Sbjct: 178 GDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQG 237
Query: 239 VFCSTRPMRIGPATNKKTVSGQQQY-------------------PKASYQNSQVAQSDDD 279
V+C RPMRI AT K +G P Y Q D
Sbjct: 238 VYCGNRPMRISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTD 297
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 339
PNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ +
Sbjct: 298 PNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQ 357
Query: 340 GTQLGGQNIRLSWGRSPSNK 359
G +G +RLSWGRS +N
Sbjct: 358 GYPIGNSRVRLSWGRSQNNS 377
>gi|452982866|gb|EME82624.1| hypothetical protein MYCFIDRAFT_51313 [Pseudocercospora fijiensis
CIRAD86]
Length = 414
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/299 (43%), Positives = 177/299 (59%), Gaps = 24/299 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + G V VK+IR+K +G GY F++F + A R L
Sbjct: 82 TLWMGELEPWIDENFIRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDSAARAL-A 140
Query: 143 FNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +PN + F+LNWAS G A RDD P+++IFVGDL +V +Y+L F+ +YP
Sbjct: 141 LNGQMIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQNKYP 200
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV-- 257
S K AK++ D ++G ++GYGFVRF DE++Q +A+ EM GV+C RPMRI AT K
Sbjct: 201 SCKSAKIMSDPISGMSRGYGFVRFADETDQQKALHEMQGVYCGNRPMRISTATPKNKSGG 260
Query: 258 -------------SGQQQY-----PKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 299
GQ Y P Y Q DPNNTTVFVG L VT++ L
Sbjct: 261 AGGPGMGGMQQVPGGQGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 320
Query: 300 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
R F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 321 RSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 379
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 98/243 (40%), Gaps = 39/243 (16%)
Query: 175 TIFVGDLAADVTDYMLQET-FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
T+++G+L + + ++ F Y K++ D+ +G GY FV F + RA+
Sbjct: 82 TLWMGELEPWIDENFIRSVWFGMGYQVN--VKMIRDKFSGSNAGYCFVDFENPDSAARAL 139
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSI 293
+NG ++ P +N+ Q + AS DD ++FVG+L
Sbjct: 140 A-LNG--------QMIPNSNR-----QFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPE 185
Query: 294 VTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
V + L LF ++Y KI + + GFV+FAD + ++AL + G G +
Sbjct: 186 VNEYVLMSLFQNKYPSCKSAKIMSDPISGMSRGYGFVRFADETDQQKALHEMQGVYCGNR 245
Query: 347 NIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQ 406
+R+S +P NK G G P MY G P G Y
Sbjct: 246 PMRISTA-TPKNKSG--------------GAGGPGMGGMQQVPGGQGMYSMGAPPMGYYG 290
Query: 407 QPQ 409
PQ
Sbjct: 291 APQ 293
>gi|342875796|gb|EGU77504.1| hypothetical protein FOXB_11986 [Fusarium oxysporum Fo5176]
Length = 405
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 183/310 (59%), Gaps = 38/310 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTG-EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
TLW+G+L+ WMDE ++ F E V VKVIR+K +G GY F+EF S A L
Sbjct: 45 TLWMGELEPWMDENFIKGVFMSAAHETVNVKVIRDKNSGN-AGYCFVEFQSPEAATNAL- 102
Query: 142 TFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+PN +++F+LNWAS G ++RDD P+++IFVGDL +V +Y+L F+AR+P
Sbjct: 103 GMNGKPVPNSQRSFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 162
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV+C RPMRI AT K G
Sbjct: 163 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKN--RG 220
Query: 260 QQQYPKASYQN------------------------------SQVAQSDDDPNNTTVFVGN 289
+ + N +Q+ Q D PNNTTVFVG
Sbjct: 221 NHGFGGQGHHNGGPMMGGMPQQQMWNGGGMQGFGYGGFNPATQMNQFTD-PNNTTVFVGG 279
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 349
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +R
Sbjct: 280 LSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVR 339
Query: 350 LSWGRSPSNK 359
LSWGRS +N
Sbjct: 340 LSWGRSQNNS 349
>gi|154279514|ref|XP_001540570.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412513|gb|EDN07900.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 422
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 180/307 (58%), Gaps = 29/307 (9%)
Query: 81 IRTLW------IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRA 134
+ ++W +G+L+ W+DE ++ + GE V VK+IR+K +G GY F++F + A
Sbjct: 82 LSSMWRNACDGMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFTTPA 141
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFVGDLAADVTDYMLQ 191
A + L T +GTP+PN + F+LNWAS G R + P+ +IFVGDL +V +Y+L
Sbjct: 142 AAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLV 200
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C RPMRI A
Sbjct: 201 SLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTA 260
Query: 252 TNKKTVSGQQQY-------------------PKASYQNSQVAQSDDDPNNTTVFVGNLDS 292
T K +G P Y Q DPNNTTVFVG L
Sbjct: 261 TPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSG 320
Query: 293 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSW
Sbjct: 321 YVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSW 380
Query: 353 GRSPSNK 359
GRS +N
Sbjct: 381 GRSQNNS 387
>gi|67904206|ref|XP_682359.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|40742733|gb|EAA61923.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|67043519|gb|AAY63883.1| putative RNA binding protein [Emericella nidulans]
gi|259485498|tpe|CBF82571.1| TPA: Putative RNA binding proteinPutative uncharacterized protein ;
[Source:UniProtKB/TrEMBL;Acc:Q5ARJ0] [Aspergillus
nidulans FGSC A4]
Length = 393
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/328 (43%), Positives = 193/328 (58%), Gaps = 25/328 (7%)
Query: 53 PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
P+ Q AP AV QQG G+ TLW+G+L+ W+DE ++ + GE V VK
Sbjct: 39 PSTAPFQGPAPGEGAPAV--AQQGNEGKT-TLWMGELEPWIDENFVRNLWFQMGEQVNVK 95
Query: 113 VIRNKQTGQIE-GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRD 169
+IR+K +G+ GY F++F S A A + L NGTPMPN + F+LNWA+ G A RD
Sbjct: 96 MIRDKFSGRSNAGYCFVDFASPAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRD 154
Query: 170 DT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D P+++IFVGDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++
Sbjct: 155 DRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDEND 214
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQY-----------------PKASYQNS 271
Q RA++EM GV+C RPMRI AT K G P Y
Sbjct: 215 QQRALSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAP 274
Query: 272 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 331
Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R A
Sbjct: 275 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 334
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSNK 359
E A+ + G +G +RLSWGRS +N
Sbjct: 335 EMAINQMQGYPIGNSRVRLSWGRSQNNS 362
>gi|350637619|gb|EHA25976.1| hypothetical protein ASPNIDRAFT_212792 [Aspergillus niger ATCC
1015]
Length = 403
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 189/314 (60%), Gaps = 24/314 (7%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-GYG 126
A P QQ G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G+ GY
Sbjct: 53 TAAPVPQQANEGKT-TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYC 111
Query: 127 FIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAA 183
F++F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL
Sbjct: 112 FVDFASPAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGP 170
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C
Sbjct: 171 EVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGN 230
Query: 244 RPMRIGPATNKKT-----VSGQQQYPKAS-------------YQNSQVAQSDDDPNNTTV 285
RPMRI AT K +G P + Y Q DPNNTTV
Sbjct: 231 RPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTV 290
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
FVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 291 FVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGN 350
Query: 346 QNIRLSWGRSPSNK 359
+RLSWGRS +N
Sbjct: 351 SRVRLSWGRSQNNS 364
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 27 APPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWI 86
A P+ + P + M MP P M+ A P A P Q T+++
Sbjct: 238 ATPKNKGPSLGAAGAMGMP-----GPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFV 292
Query: 87 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGT 146
G L ++ E L + F GE+ VK+ K G GF++F+ R AE + G
Sbjct: 293 GGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQMQGY 346
Query: 147 PMPNGEQNFRLNWA 160
P+ G RL+W
Sbjct: 347 PI--GNSRVRLSWG 358
>gi|326524666|dbj|BAK04269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 133/310 (42%), Positives = 184/310 (59%), Gaps = 35/310 (11%)
Query: 83 TLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
TLW+G+L+ WMDE ++ F + T E V VKVIR+K +G GY F+EF + A + L
Sbjct: 49 TLWMGELEPWMDENFIKGVFLSATTETVNVKVIRDKNSGN-AGYCFVEFQTPEAATKAL- 106
Query: 142 TFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG+ +PN ++F+LNWAS G ++RDD P+++IFVGDL +V +Y+L F+AR+P
Sbjct: 107 ALNGSGVPNSSRHFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 166
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT-----NK 254
S K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV+C RPMRI AT N
Sbjct: 167 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 226
Query: 255 KTVSG-------------------QQQYP------KASYQNSQVAQSDDDPNNTTVFVGN 289
G QQ +P + + DPNNTTVFVG
Sbjct: 227 GFAHGHHNAMMGGMPQQQMWAGGMQQGFPYGGGGGGGGFNPATQMNQFTDPNNTTVFVGG 286
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 349
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +R
Sbjct: 287 LSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVR 346
Query: 350 LSWGRSPSNK 359
LSWGRS +N
Sbjct: 347 LSWGRSQNNS 356
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 37/215 (17%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G+L + + ++ F + T KV+ D+ +G GY FV F +A+
Sbjct: 49 TLWMGELEPWMDENFIKGVFLSATTETVNVKVIRDKNSGNA-GYCFVEFQTPEAATKALA 107
Query: 235 -EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSI 293
+GV S+R ++ A+ V + DD ++FVG+L
Sbjct: 108 LNGSGVPNSSRHFKLNWASGGGLVD----------------RRDDRGPEYSIFVGDLGPE 151
Query: 294 VTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
V + L LF +++ KI + GFV+F+D + + AL + G G +
Sbjct: 152 VNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNR 211
Query: 347 NIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYEN 381
+R+S A P N G +G+A G+ N
Sbjct: 212 PMRIS--------TATPK----NRGNHGFAHGHHN 234
>gi|255954935|ref|XP_002568220.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589931|emb|CAP96086.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 408
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/315 (44%), Positives = 189/315 (60%), Gaps = 26/315 (8%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-GYGF 127
A P QQG G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G+ GY F
Sbjct: 48 AAPVPQQGADGKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGRSNAGYCF 106
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAAD 184
++F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +
Sbjct: 107 VDFASPAAAAKALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPE 165
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C R
Sbjct: 166 VNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNR 225
Query: 245 PMRIGPATNKKTVSGQQQYPKAS--------------------YQNSQVAQSDDDPNNTT 284
PMRI AT K G A+ Y Q DPNNTT
Sbjct: 226 PMRISTATPKNKGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAPQPMNQFTDPNNTT 285
Query: 285 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 344
VFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 286 VFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIG 345
Query: 345 GQNIRLSWGRSPSNK 359
+RLSWGRS +N
Sbjct: 346 NSRVRLSWGRSQNNS 360
>gi|440636370|gb|ELR06289.1| hypothetical protein, variant [Geomyces destructans 20631-21]
gi|440636371|gb|ELR06290.1| hypothetical protein GMDG_07882 [Geomyces destructans 20631-21]
Length = 411
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 130/304 (42%), Positives = 179/304 (58%), Gaps = 29/304 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + GE V VK+IR+K +G GY FI+F + A + L +
Sbjct: 76 TLWMGELEPWIDENFVRSVWFGMGEQVNVKMIRDKFSGN-AGYCFIDFTTPEAAAKAL-S 133
Query: 143 FNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG+ +PN + F+LNWAS G ++RDD P+ +IFVGDL +V +Y+L F++R+PS
Sbjct: 134 LNGSMIPNTSRPFKLNWASGGGLADRRDDRGPEFSIFVGDLGPEVNEYVLVSLFQSRFPS 193
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
K AK++ D ++G ++GYGFVRF DE +Q RA+TEM GV+C RPMRI AT K G
Sbjct: 194 CKSAKIMTDPISGMSRGYGFVRFSDEGDQQRALTEMQGVYCGNRPMRISTATPKNKSGGG 253
Query: 261 QQY-------------------------PKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 295
P Y Q DPNNTTVFVG L VT
Sbjct: 254 GPPGAMGGMPGAPMGGNMAPGMYSMGAPPIGYYGAPQPMNQFTDPNNTTVFVGGLSGYVT 313
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS
Sbjct: 314 EDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRS 373
Query: 356 PSNK 359
+N
Sbjct: 374 QNNS 377
>gi|317033242|ref|XP_001395129.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
gi|317033244|ref|XP_003188853.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
Length = 399
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 189/314 (60%), Gaps = 24/314 (7%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-GYG 126
A P QQ G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G+ GY
Sbjct: 53 TAAPVPQQANEGKT-TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYC 111
Query: 127 FIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAA 183
F++F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL
Sbjct: 112 FVDFASPAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGP 170
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C
Sbjct: 171 EVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGN 230
Query: 244 RPMRIGPATNKKT-----VSGQQQYPKAS-------------YQNSQVAQSDDDPNNTTV 285
RPMRI AT K +G P + Y Q DPNNTTV
Sbjct: 231 RPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTV 290
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
FVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 291 FVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGN 350
Query: 346 QNIRLSWGRSPSNK 359
+RLSWGRS +N
Sbjct: 351 SRVRLSWGRSQNNS 364
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 27 APPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWI 86
A P+ + P + M MP P M+ A P A P Q T+++
Sbjct: 238 ATPKNKGPSLGAAGAMGMP-----GPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFV 292
Query: 87 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGT 146
G L ++ E L + F GE+ VK+ K G GF++F+ R AE + G
Sbjct: 293 GGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQMQGY 346
Query: 147 PMPNGEQNFRLNWA 160
P+ G RL+W
Sbjct: 347 PI--GNSRVRLSWG 358
>gi|358401132|gb|EHK50447.1| hypothetical protein TRIATDRAFT_297212 [Trichoderma atroviride IMI
206040]
Length = 409
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 193/347 (55%), Gaps = 50/347 (14%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVA 110
PPA +A P AG P Q Q + TLW+G+L+ WMDE ++ F + GE V
Sbjct: 8 PPA--TDMSAVPSPAG---PTQDQAKT----TLWMGELEPWMDENFIKGVFLSSAGETVN 58
Query: 111 VKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRD 169
VKVIR+K +G GY F+EF + A + L NG +PN ++ F+LNWAS G ++RD
Sbjct: 59 VKVIRDKNSGN-AGYCFVEFPTPDSATKAL-GLNGQAVPNSQRQFKLNWASGGGLVDRRD 116
Query: 170 DT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D P+++IFVGDL +V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++
Sbjct: 117 DRGPEYSIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDEND 176
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTV-------------------------SGQQQY 263
Q RA+ EM GV+C RPMRI AT K G Q +
Sbjct: 177 QQRALVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQQMWGGVQNF 236
Query: 264 PKASYQNSQVAQSDD-----------DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 312
P + DPNNTTVFVG L VT++ LR F +G++ +V
Sbjct: 237 PYGGGGGGGGGGGGNFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYV 296
Query: 313 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
KIP GK CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 297 KIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 343
>gi|330935675|ref|XP_003305076.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
gi|311318022|gb|EFQ86789.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
Length = 471
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 124/301 (41%), Positives = 176/301 (58%), Gaps = 25/301 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + + GE V VK+IR+K +G GY F++F S A + L
Sbjct: 66 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKAL-G 124
Query: 143 FNGTPMPNGEQNFRLNWASFGA-GEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG+ +PN + F+LNWAS G ++R P+ ++FVGDL +VT+++L + F+ +Y ST
Sbjct: 125 LNGSLIPNSNRPFKLNWASGGGLADRRQRGPEFSVFVGDLGPEVTEFVLVQLFQNKYAST 184
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
K AK++ D ++G ++GYGFVRF E +Q +A+TEM GV+C RPMRI AT K G
Sbjct: 185 KSAKIMSDPISGMSRGYGFVRFASEDDQQKALTEMQGVYCGNRPMRISTATPKNKSGGPG 244
Query: 262 QYPKAS-----------------------YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 298
Y Q DPNNTTVFVG L VT++
Sbjct: 245 GPGGMGMPQGGGGPGMGMYSMNAPPMGGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTEDE 304
Query: 299 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 305 LRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 364
Query: 359 K 359
Sbjct: 365 S 365
>gi|425773059|gb|EKV11433.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum Pd1]
gi|425778836|gb|EKV16941.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum PHI26]
Length = 408
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 139/315 (44%), Positives = 189/315 (60%), Gaps = 26/315 (8%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-GYGF 127
+ P QQG G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G+ GY F
Sbjct: 48 SAPVPQQGADGKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGRSNAGYCF 106
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAAD 184
++F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +
Sbjct: 107 VDFASPAAAAKALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPE 165
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C R
Sbjct: 166 VNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNR 225
Query: 245 PMRIGPATNKKTVSGQQQYPKAS--------------------YQNSQVAQSDDDPNNTT 284
PMRI AT K G A+ Y Q DPNNTT
Sbjct: 226 PMRISTATPKNKGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAPQPMNQFTDPNNTT 285
Query: 285 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 344
VFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 286 VFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIG 345
Query: 345 GQNIRLSWGRSPSNK 359
+RLSWGRS +N
Sbjct: 346 NSRVRLSWGRSQNNS 360
>gi|345561228|gb|EGX44324.1| hypothetical protein AOL_s00193g52 [Arthrobotrys oligospora ATCC
24927]
Length = 461
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 138/336 (41%), Positives = 189/336 (56%), Gaps = 33/336 (9%)
Query: 45 PPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAH 104
P QP +Q PA + +A A G TLW+G+L+ W+DE ++ + +
Sbjct: 31 PGQPPSQSPAPFNGNGSANGANGNDAK----------TTLWMGELEPWIDENFIRSVWYS 80
Query: 105 TGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA 164
GE V VK+IR+K G GY F++F S A + L NGT +PN + F+LNWAS G
Sbjct: 81 LGEQVNVKMIRDKFNGS-AGYCFVDFTSPQAAAKAL-ALNGTQIPNSNRPFKLNWASGGG 138
Query: 165 -GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
++RDD P+++IFVGDL +V +++L F+ R+ S K AK++ D ++G ++GYGFVR
Sbjct: 139 LADRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQGRFQSCKSAKIMTDPISGMSRGYGFVR 198
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQY------------------P 264
F DE +Q RA+TEM GV+C RPMRI AT K Q P
Sbjct: 199 FADEMDQQRALTEMQGVYCGNRPMRISTATPKNKGGNQGMMQQGMGGMAPQMGMYTMGAP 258
Query: 265 KASYQNS-QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFV 323
Y + Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFV
Sbjct: 259 TMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 318
Query: 324 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
QF R AE A+ + G +G +RLSWGRS +N
Sbjct: 319 QFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 354
>gi|396480654|ref|XP_003841045.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
gi|312217619|emb|CBX97566.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
Length = 433
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 180/302 (59%), Gaps = 27/302 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + + GE V VK+IR+K +G GY F++F S A + L T
Sbjct: 73 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGN-AGYCFVDFSSPDAAAKAL-T 130
Query: 143 FNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +PN + F+LNWAS G A RD+ P+++IFVGDL +VT+++L + F+ +YP
Sbjct: 131 LNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEYSIFVGDLGPEVTEFVLVQLFQNKYP 190
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
STK AK++ D ++G ++GYGFVRF E +Q +A+TEM GV+C RPMRI AT K G
Sbjct: 191 STKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNKSGG 250
Query: 260 QQQY----------------------PKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 297
P Y Q DPNNTTVFVG L VT++
Sbjct: 251 PGGPGGMGMPQQGGGPGMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 310
Query: 298 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS +
Sbjct: 311 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQN 370
Query: 358 NK 359
N
Sbjct: 371 NS 372
>gi|154296254|ref|XP_001548559.1| hypothetical protein BC1G_12954 [Botryotinia fuckeliana B05.10]
Length = 409
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/339 (40%), Positives = 190/339 (56%), Gaps = 40/339 (11%)
Query: 53 PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
PA +A Q A + + +V + TLW+G+L+ W+DE ++ + + GE V VK
Sbjct: 49 PAPFAQQGAGVEGSSGSVTGDAK------TTLWMGELEPWIDENFIRSVWFGMGEQVNVK 102
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT 171
+IR+K +G GY FI+F S A A + L + NG+ +PN + F+LNWAS G ++RDD
Sbjct: 103 MIRDKFSGN-AGYCFIDFTSPAAAAKAL-SLNGSMIPNTTRPFKLNWASGGGLADRRDDR 160
Query: 172 -PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
P+ +IFVGDL +V +Y+L F+AR+PS K AK++ D ++G ++GYGFVRF +E +Q
Sbjct: 161 GPEFSIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFAEEGDQQ 220
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSG------------------------------Q 260
RA+TEM GV+C RPMRI AT K G
Sbjct: 221 RALTEMQGVYCGNRPMRISTATPKNKSGGAGPAGMQMQGGGGGGMPGAMGGAPGMYGMGG 280
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 320
Y Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK C
Sbjct: 281 GPPMAGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGC 340
Query: 321 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
GFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 341 GFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 379
>gi|406866319|gb|EKD19359.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 812
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 182/310 (58%), Gaps = 35/310 (11%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + GE V VK+IR+K +G GY FI+F S A A + L +
Sbjct: 308 TLWMGELEPWIDENFVRSVWFGMGEQVNVKMIRDKFSGN-AGYCFIDFSSPAAAAKAL-S 365
Query: 143 FNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG+ +PN + F+LNWAS G ++RDD P+++IFVGDL +V +Y+L F+AR+PS
Sbjct: 366 LNGSMIPNTARPFKLNWASGGGLADRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 425
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
K AK++ D ++G ++GYGFVRF DE +Q RA+TEM GV+C RPMRI AT K G
Sbjct: 426 CKSAKIMTDPISGMSRGYGFVRFADEGDQQRALTEMQGVYCGNRPMRISTATPKNKAGGG 485
Query: 261 QQ---------------YPKASYQNSQVA----------------QSDDDPNNTTVFVGN 289
P A S A DPNNTTVFVG
Sbjct: 486 GPAGMPMQQGGPNMGPGMPAAPGMYSMGAPPPMQYGGGYGQQQPMNQFTDPNNTTVFVGG 545
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 349
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +R
Sbjct: 546 LSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVR 605
Query: 350 LSWGRSPSNK 359
LSWGRS +N
Sbjct: 606 LSWGRSQNNS 615
>gi|453086344|gb|EMF14386.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 425
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 176/309 (56%), Gaps = 33/309 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + G V VK+IR+K +G GY F++F + A R LQ
Sbjct: 84 TLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDAAGRALQ- 142
Query: 143 FNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +PN + F+LNWAS G A RDD P+++IFVGDL +V +Y+L F+ +YP
Sbjct: 143 LNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQNKYP 202
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S K AK++ D ++G ++GYGFVRF DE +Q +A+ EM GV+C RPMRI AT K G
Sbjct: 203 SCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMRISTATPKNKSGG 262
Query: 260 QQ------------------------QY-----PKASYQNSQVAQSDDDPNNTTVFVGNL 290
Y P Y Q DPNNTTVFVG L
Sbjct: 263 AAVPPGGMPQPGMPGGPAAGGPQMPGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGL 322
Query: 291 DSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 350
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RL
Sbjct: 323 SGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRL 382
Query: 351 SWGRSPSNK 359
SWGRS +N
Sbjct: 383 SWGRSQNNS 391
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 105/245 (42%), Gaps = 34/245 (13%)
Query: 175 TIFVGDLAADVTDYMLQET-FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
T+++G+L + + ++ F Y K++ D+ +G GY FV F + RA+
Sbjct: 84 TLWMGELEPWIDENFVRSVWFGMGYQVN--VKMIRDKFSGSNAGYCFVDFENPDAAGRAL 141
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSI 293
++NG ++ P +N+ Q + AS DD ++FVG+L
Sbjct: 142 -QLNG--------QVIPNSNR-----QFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPE 187
Query: 294 VTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
V + L LF ++Y KI + + GFV+FAD ++AL + G G +
Sbjct: 188 VNEYVLMSLFQNKYPSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNR 247
Query: 347 NIRLSWGRSPSNKQ--AQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGN 404
+R+S +P NK A P G Q G AA PQ P MY G P G
Sbjct: 248 PMRISTA-TPKNKSGGAAVPPG-------GMPQPGMPGGPAAGGPQMPGMYSMGAPPMGY 299
Query: 405 YQQPQ 409
Y PQ
Sbjct: 300 YGAPQ 304
>gi|452844119|gb|EME46053.1| hypothetical protein DOTSEDRAFT_70146 [Dothistroma septosporum
NZE10]
Length = 407
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 174/302 (57%), Gaps = 26/302 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + G V VK+IR+K +G GY F++F + A R LQ
Sbjct: 72 TLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPESATRALQ- 130
Query: 143 FNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +PN + F+LNWAS G A RDD P+++IFVGDL +V +Y+L F+ +Y
Sbjct: 131 LNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQGKYT 190
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT--- 256
S K AK++ D ++G ++GYGFVRF DE +Q +A+ EM GV+C RPMRI AT K
Sbjct: 191 SCKSAKIMSDPISGMSRGYGFVRFADEGDQQKALHEMQGVYCGNRPMRISTATPKNKSGG 250
Query: 257 -------------------VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 297
V P Y Q DPNNTTVFVG L VT++
Sbjct: 251 GGPGMPGMQGGMGPGAPGGVYAMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 310
Query: 298 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS +
Sbjct: 311 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQN 370
Query: 358 NK 359
N
Sbjct: 371 NS 372
>gi|301107790|ref|XP_002902977.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098095|gb|EEY56147.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 382
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 170/267 (63%), Gaps = 14/267 (5%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +TLW+GD+Q DE ++ + F+ E VK+IR+K TG GYGF+EF ++ GA++V
Sbjct: 4 ECKTLWMGDIQMHWDEAFITSLFSSAAEQPVVKLIRDKVTGYPAGYGFLEFPTQQGAQQV 63
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD-HTIFVGDLAADVTDYMLQETFRARY 198
L+T NG +PN FR+NW GAG +R +T D H+IFVGDLA DVTD +L TF AR+
Sbjct: 64 LETLNGQLIPNTMHRFRMNW---GAGGRRIETSDDHSIFVGDLAPDVTDELLLATFNARF 120
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ +GAKVV+D +T +KG+GFVRFG + E +A+ MNGV+CS+RPMR+ AT +
Sbjct: 121 TTVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATER---- 176
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
S Q +++ NTTVFVG LD T++ LR F G +V VK+P G+
Sbjct: 177 ------NKSRQQVGFTMGEEEGTNTTVFVGGLDPATTEDELRARFGALGAIVSVKVPPGR 230
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGG 345
CGFVQ++ + AE A+ +NG + G
Sbjct: 231 GCGFVQYSSKEAAEVAISQMNGQAVSG 257
>gi|451846221|gb|EMD59531.1| hypothetical protein COCSADRAFT_251085 [Cochliobolus sativus
ND90Pr]
Length = 406
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 181/303 (59%), Gaps = 28/303 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + + GE V VK+IR+K +G GY F++F S A + L
Sbjct: 65 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGN-AGYCFVDFASPDAAAKAL-N 122
Query: 143 FNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +PN + F+LNWAS G A RD+ P+ +IFVGDL +VT+++L + F+ +YP
Sbjct: 123 LNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEFSIFVGDLGPEVTEFVLVQLFQNKYP 182
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS- 258
STK AK++ D ++G ++GYGFVRF E +Q +A+TEM GV+C RPMRI AT K
Sbjct: 183 STKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNKSGG 242
Query: 259 ----------------GQQQY-----PKASYQNS-QVAQSDDDPNNTTVFVGNLDSIVTD 296
G Y P +Y + Q DPNNTTVFVG L VT+
Sbjct: 243 PGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQPMNQFTDPNNTTVFVGGLSGYVTE 302
Query: 297 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 356
+ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS
Sbjct: 303 DELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQ 362
Query: 357 SNK 359
+N
Sbjct: 363 NNS 365
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 93/246 (37%), Gaps = 40/246 (16%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G+L + + ++ + T K++ D+ +G GY FV F +A+
Sbjct: 65 TLWMGELEPWIDENFVRSIWY-NMGETVNVKMIRDKFSGNA-GYCFVDFASPDAAAKALN 122
Query: 235 EMNGVFC--STRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDS 292
+NG S RP ++ A+ D+ ++FVG+L
Sbjct: 123 -LNGQLIPNSNRPFKLNWASGGGLAD---------------RSRDERGPEFSIFVGDLGP 166
Query: 293 IVTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGG 345
VT+ L +LF ++Y KI + + GFV+FA ++AL + G G
Sbjct: 167 EVTEFVLVQLFQNKYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGN 226
Query: 346 QNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNY 405
+ +R+S +P NK A MY G P GNY
Sbjct: 227 RPMRISTA-TPKNKSGG------------PGGPGGMGMPQGAGGPGMGMYSMGAPPMGNY 273
Query: 406 QQPQQP 411
QP
Sbjct: 274 YGAPQP 279
>gi|169616740|ref|XP_001801785.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
gi|111060133|gb|EAT81253.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
Length = 408
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 185/311 (59%), Gaps = 29/311 (9%)
Query: 76 GQPGEIRT-LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRA 134
GQP +T LW+G+L+ W+DE ++ + + + GE V VK+IR+K +G GY F++F +
Sbjct: 54 GQPSAGKTTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGN-AGYCFVDFSTPE 112
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQ 191
A + L + NG +PN + F+LNWAS G A RD+ P+++IFVGDL +VT+++L
Sbjct: 113 AAAKAL-SLNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEYSIFVGDLGPEVTEFVLV 171
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
+ F+ +Y STK AK++ D ++G ++GYGFVRF DE++Q +A+T+M GV+C RPMRI A
Sbjct: 172 QLFQNKYRSTKSAKIMSDPISGMSRGYGFVRFADEADQQKALTDMQGVYCGNRPMRISTA 231
Query: 252 TNKKTVSGQQQY-----------------------PKASYQNSQVAQSDDDPNNTTVFVG 288
T K G P Y Q DPNNTTVFVG
Sbjct: 232 TPKNKSGGPGGPGGMGMQQGGPGGPGMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVG 291
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +
Sbjct: 292 GLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRV 351
Query: 349 RLSWGRSPSNK 359
RLSWGRS +N
Sbjct: 352 RLSWGRSQNNS 362
>gi|213401961|ref|XP_002171753.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|211999800|gb|EEB05460.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 476
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 131/286 (45%), Positives = 173/286 (60%), Gaps = 17/286 (5%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L ++ E + + GE V VK+IR++ +G GY F+EF S A A + + +
Sbjct: 99 TLWMGELAPFITEAMVQQIWNSLGENVNVKIIRDRYSGLNAGYCFVEFNSPASAMKAM-S 157
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDD--TPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NGT +P + F+LNWAS G R + TP+ +IFVGDL +VT+ ML F++RY S
Sbjct: 158 LNGTVIPGTNRFFKLNWASGGGLHDRREGKTPEFSIFVGDLGPEVTEPMLLSLFQSRYRS 217
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
K AK+++D T ++GYGFVRF DE++Q RA+TEM GV+C RPMRI AT K S
Sbjct: 218 CKSAKIMMDSNTNLSRGYGFVRFYDENDQKRALTEMQGVYCGNRPMRIAMATPK---SKN 274
Query: 261 QQY-----------PKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 309
Y P Y Q DP NTTVFVG L VT+E LR LF +G++
Sbjct: 275 HMYSPMNMMHIGLQPVGFYGAPQPVNQFTDPTNTTVFVGGLSGYVTEEELRFLFQNFGEI 334
Query: 310 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
++VKIP GK CGFVQF +R AE A+ + G LG IRLSWGRS
Sbjct: 335 IYVKIPPGKGCGFVQFVNRQSAELAINQMQGYPLGKSRIRLSWGRS 380
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 23/125 (18%)
Query: 249 GPATNKKTVSGQQQYPKASYQN---SQVAQSDD----------DPNNTTVFVGNLDSIVT 295
G ATN T +G Q + + N S + SD+ NN+T+++G L +T
Sbjct: 52 GAATNPAT-TGLQFHSSNNASNASLSDIKSSDNMMHVNNDETASHNNSTLWMGELAPFIT 110
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQN-- 347
+ ++++++ G+ V+VKI + G FV+F + A +A+ LNGT + G N
Sbjct: 111 EAMVQQIWNSLGENVNVKIIRDRYSGLNAGYCFVEFNSPASAMKAMS-LNGTVIPGTNRF 169
Query: 348 IRLSW 352
+L+W
Sbjct: 170 FKLNW 174
>gi|328769877|gb|EGF79920.1| hypothetical protein BATDEDRAFT_19794 [Batrachochytrium
dendrobatidis JAM81]
Length = 470
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 175/299 (58%), Gaps = 26/299 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+GDL WMDE ++ + GE V VK+I++K TG + GY F+EF S A ++L+
Sbjct: 13 TLWMGDLLPWMDEHFIRQTWRLLGESVTVKMIKDKSTGSLAGYCFVEFSSSDVAAKLLEL 72
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
NGT +P F+LNWA G P+ +IFVGDLA ++ D +L + F RYPS K
Sbjct: 73 VNGTLIPGTHCFFKLNWAFGGGLSPLYVLPEFSIFVGDLAHEINDILLMQVFHERYPSVK 132
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ- 261
A+VVID TG KGYGFVRFG E++Q +++ ++ G +RP+R+ AT K G
Sbjct: 133 SARVVIDPTTGSPKGYGFVRFGSEADQQQSLVDLQGQMIGSRPVRVSIATPKHKALGSNG 192
Query: 262 -----QYPK-ASYQNSQVAQ-------------------SDDDPNNTTVFVGNLDSIVTD 296
YP SY ++ A +DP N+T+F+G L + +T+
Sbjct: 193 HGMPGYYPIPPSYMDASGAMIPNSAHMIYRQPVYMHQHLGGNDPTNSTIFIGALPATMTN 252
Query: 297 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
+ LR+ F +G++V+ KIP GKRCGFVQF R AE A++ ++G +GG +RLSWGRS
Sbjct: 253 DDLRKHFLPFGEIVYTKIPFGKRCGFVQFIHRQSAEMAIQEMDGKVIGGSALRLSWGRS 311
>gi|315043939|ref|XP_003171345.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
gi|311343688|gb|EFR02891.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
Length = 412
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/318 (41%), Positives = 182/318 (57%), Gaps = 36/318 (11%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
QP TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F++F + A A
Sbjct: 57 QPDGKTTLWMGELEGWIDENFIRNIWYQMGEQVNVKMIRDKFSGANAGYCFVDFATPAAA 116
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFVGDLAADVTDYMLQET 193
+ L T NGTPMPN ++ F+LNWAS G R + P+ +IFVGDL +V +Y+L
Sbjct: 117 AKAL-TVNGTPMPNTQRPFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSL 175
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F++R+PS K AK++ D +TG ++GYGFVRF DE++Q RA++EM GV+C RPMRI AT
Sbjct: 176 FQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALSEMQGVYCGNRPMRISTATP 235
Query: 254 KK------------------------------TVSGQQQYPKASYQNS--QVAQSDDDPN 281
K P+ Y + Q DPN
Sbjct: 236 KNKGPAGPGGPAHMGVPGGPPGGMYPPSMGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPN 295
Query: 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 341
NTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G
Sbjct: 296 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 355
Query: 342 QLGGQNIRLSWGRSPSNK 359
+G +RLSWGRS +N
Sbjct: 356 PIGNSRVRLSWGRSQNNS 373
>gi|451993069|gb|EMD85544.1| hypothetical protein COCHEDRAFT_1035442 [Cochliobolus
heterostrophus C5]
Length = 409
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 128/306 (41%), Positives = 179/306 (58%), Gaps = 31/306 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + + GE V VK+IR+K +G GY F++F S A + L
Sbjct: 65 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGN-AGYCFVDFASPDAAAKAL-N 122
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKR------DDTPDHTIFVGDLAADVTDYMLQETFRA 196
NG +PN + F+LNWAS G R + P+ +IFVGDL +VT+++L + F+
Sbjct: 123 LNGQLIPNSNRPFKLNWASGGGLADRRQVIRDERGPEFSIFVGDLGPEVTEFVLVQLFQN 182
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+YPSTK AK++ D ++G ++GYGFVRF E +Q +A+TEM GV+C RPMRI AT K
Sbjct: 183 KYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNK 242
Query: 257 VS-----------------GQQQY-----PKASYQNS-QVAQSDDDPNNTTVFVGNLDSI 293
G Y P +Y + Q DPNNTTVFVG L
Sbjct: 243 SGGPGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQPMNQFTDPNNTTVFVGGLSGY 302
Query: 294 VTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWG
Sbjct: 303 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 362
Query: 354 RSPSNK 359
RS +N
Sbjct: 363 RSQNNS 368
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 96/246 (39%), Gaps = 37/246 (15%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G+L + + ++ + T K++ D+ +G GY FV F +A+
Sbjct: 65 TLWMGELEPWIDENFVRSIWY-NMGETVNVKMIRDKFSGNA-GYCFVDFASPDAAAKALN 122
Query: 235 EMNGVFC--STRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDS 292
+NG S RP ++ A+ QV + + P ++FVG+L
Sbjct: 123 -LNGQLIPNSNRPFKLNWASGGGLAD-----------RRQVIRDERGPE-FSIFVGDLGP 169
Query: 293 IVTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGG 345
VT+ L +LF ++Y KI + + GFV+FA ++AL + G G
Sbjct: 170 EVTEFVLVQLFQNKYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGN 229
Query: 346 QNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNY 405
+ +R+S +P NK A MY G P GNY
Sbjct: 230 RPMRISTA-TPKNKSGG------------PGGPGGMGMPQGAGGPGMGMYSMGAPPMGNY 276
Query: 406 QQPQQP 411
QP
Sbjct: 277 YGAPQP 282
>gi|189197507|ref|XP_001935091.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981039|gb|EDU47665.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 490
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/320 (39%), Positives = 177/320 (55%), Gaps = 44/320 (13%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + + GE V VK+IR+K +G GY F++F S A + L +
Sbjct: 66 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKAL-S 124
Query: 143 FNGTPMPNGEQNFRLNWASFGA-------------------GEKRDDT-PDHTIFVGDLA 182
NG+ +PN + F+LNWAS G RD+ P+ ++FVGDL
Sbjct: 125 LNGSLIPNSNRPFKLNWASGGGLADRRQVSQVSKYKHMANESNSRDERGPEFSVFVGDLG 184
Query: 183 ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCS 242
+VT+++L + F+ +Y STK AK++ D ++G ++GYGFVRF E +Q +A+TEM GV+C
Sbjct: 185 PEVTEFVLVQLFQNKYASTKSAKIMSDPISGMSRGYGFVRFASEDDQQKALTEMQGVYCG 244
Query: 243 TRPMRIGPATNKKTVSGQQQYPKAS-----------------------YQNSQVAQSDDD 279
RPMRI AT K G Y Q D
Sbjct: 245 NRPMRISTATPKNKSGGPGGPGGMGMPQGGGGPGMGMYSMNAPPMGGYYGTPQPMNQFTD 304
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 339
PNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ +
Sbjct: 305 PNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQ 364
Query: 340 GTQLGGQNIRLSWGRSPSNK 359
G +G +RLSWGRS +N
Sbjct: 365 GYPIGNSRVRLSWGRSQNNS 384
>gi|398412748|ref|XP_003857692.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
gi|339477577|gb|EGP92668.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
Length = 437
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/317 (40%), Positives = 174/317 (54%), Gaps = 40/317 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + G V VK+IR+K +G GY F++F + A R LQ
Sbjct: 73 TLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDQATRALQ- 131
Query: 143 FNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +PN + F+LNWAS G A RDD P+ +IFVGDL +V +Y+L F+ +Y
Sbjct: 132 LNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEFSIFVGDLGPEVNEYVLMSLFQGKYT 191
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S K AK++ D ++G ++GYGFVRF DE +Q +A+ EM GV+C RPMRI AT K
Sbjct: 192 SCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMRISTATPKNKSGA 251
Query: 260 QQQY-------------------------PKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
P Y Q DPNNTTVFVG L V
Sbjct: 252 GGPGGMPGMGPPGGPGGNPNMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYV 311
Query: 295 TDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
T++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGR
Sbjct: 312 TEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR 371
Query: 355 SPSNKQAQPDPNQWNAG 371
S Q N+G
Sbjct: 372 S-----------QNNSG 377
>gi|449302980|gb|EMC98988.1| hypothetical protein BAUCODRAFT_386817 [Baudoinia compniacensis
UAMH 10762]
Length = 431
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 172/304 (56%), Gaps = 29/304 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + G V VK+IR+K +G GY F++F + A R LQ
Sbjct: 82 TLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENTDSAGRALQ- 140
Query: 143 FNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +PN + F+LNWAS G A RDD P+++IFVGDL +V +Y+L F+ +Y
Sbjct: 141 LNGQMIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQGKYN 200
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S K AK++ D ++G ++GYGFVRF DE +Q +A+ EM GV+C RPMRI AT K G
Sbjct: 201 SCKSAKIMSDPISGMSRGYGFVRFSDEQDQQKALHEMQGVYCGNRPMRISTATPKNKSGG 260
Query: 260 QQQYPKASYQNSQVAQSD-------------------------DDPNNTTVFVGNLDSIV 294
Q DPNNTTVFVG L V
Sbjct: 261 GGPGMGGMPGGMQPGMYGMGQPPMSGGGGGGGYYPQQQPMNQFTDPNNTTVFVGGLSGYV 320
Query: 295 TDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
T++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGR
Sbjct: 321 TEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGR 380
Query: 355 SPSN 358
S +N
Sbjct: 381 SQNN 384
>gi|298706390|emb|CBJ29399.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 434
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/276 (42%), Positives = 170/276 (61%), Gaps = 17/276 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAH-TGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+GD+Q E Y+ + F+ G+ + VK+IR++ G + GYGFI+F + A+ VL
Sbjct: 16 KTLWLGDVQPDWTEEYVESLFSSIVGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVL 75
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+ NG P+ +RLNW GAG KR + P++++FVGDL+ +VTD L+ TF +Y
Sbjct: 76 DSLNGKPIEGTSLRYRLNW---GAGGKRIEQAPEYSVFVGDLSPEVTDAELKATFLGKYT 132
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S GAKVV + +TG +K +GF+RFGDE E+ A+T MNG C RP+R+ PAT + +V G
Sbjct: 133 SVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPATKRTSVQG 192
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
Q DP+NTTVFVG ++ VT++ LR+ F+ G++ V P G+
Sbjct: 193 ------------QTGAHATDPSNTTVFVGGINDSVTEKVLRDTFNSAGEIQTVTTPPGRG 240
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
C FV FA R+ AE + + GT + G +RLSWG+S
Sbjct: 241 CAFVTFAHRASAEHVINNMQGTTVCGSCVRLSWGKS 276
>gi|290997888|ref|XP_002681513.1| predicted protein [Naegleria gruberi]
gi|284095137|gb|EFC48769.1| predicted protein [Naegleria gruberi]
Length = 292
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 176/299 (58%), Gaps = 27/299 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGE--VVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
RTLW+GDL MD+ Y+ FA+ + +VK+I+++ TG+ GYGF+EF S A+ V
Sbjct: 1 RTLWMGDLDDSMDDEYVKKLFANDIRPSINSVKIIKDRNTGKSIGYGFVEFASIEIAKAV 60
Query: 140 LQTFNGTPMPNG-EQNFRLNWASFGAGEK---------------RDDTPDHTIFVGDLAA 183
L+++ G P+P + +RLNWA+ G +++ +IFVGDLA
Sbjct: 61 LESYAGKPIPTLPNKIYRLNWAAQNQGSNPLFSSQPGGKPSSGGKENIV--SIFVGDLAP 118
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
DV DYML++TFR RYPS +GAKVV+D +G +KGYGFV+F DE + +R+MTEM GV+ S+
Sbjct: 119 DVNDYMLEQTFRNRYPSVRGAKVVMDPKSGISKGYGFVKFADEDDMMRSMTEMQGVYISS 178
Query: 244 RPMRIGPATNKKTVSG--QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 301
RP++I ATN G + P + Q NTTV+VGNL ++ LRE
Sbjct: 179 RPVKISHATNNFKSQGALEDLMPTTIITTDPLEQE-----NTTVYVGNLSPNTDEKILRE 233
Query: 302 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
F YG + VKIP CGF+ F AE A+ +NG ++ G +R+SWGR NK+
Sbjct: 234 FFQGYGPITSVKIPTNSNCGFINFTRTEHAERAIIEMNGIEIQGNRVRVSWGRVQHNKK 292
>gi|302511659|ref|XP_003017781.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
gi|291181352|gb|EFE37136.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
Length = 428
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 174/309 (56%), Gaps = 36/309 (11%)
Query: 86 IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
+G+L+ W+DE ++ + GE V VK+IR+K +G GY F++F S A A NG
Sbjct: 85 MGELEGWIDENFIRNIWYQMGEQVNVKMIRDKFSGANAGYCFVDFASPA-AAAKALAVNG 143
Query: 146 TPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
TPMPN ++ F+LNWAS G R + P+ +IFVGDL +V +Y+L F++R+PS K
Sbjct: 144 TPMPNTQRPFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCK 203
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK------- 255
AK++ D +TG ++GYGFVRF DE++Q RA++EM GV+C RPMRI AT K
Sbjct: 204 SAKIMTDPITGLSRGYGFVRFSDETDQQRALSEMQGVYCGNRPMRISTATPKNKGPAGPG 263
Query: 256 -----------------------TVSGQQQYPKASYQNS--QVAQSDDDPNNTTVFVGNL 290
P+ Y + Q DPNNTTVFVG L
Sbjct: 264 GPAHMGVPGGPPGGMYPPSMGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGL 323
Query: 291 DSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 350
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RL
Sbjct: 324 SGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRL 383
Query: 351 SWGRSPSNK 359
SWGRS +N
Sbjct: 384 SWGRSQNNS 392
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L ++ E L + F GE+ VK+ K G GF++F+ R AE +
Sbjct: 317 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQ 370
Query: 143 FNGTPMPNGEQNFRLNWA 160
G P+ G RL+W
Sbjct: 371 MQGYPI--GNSRVRLSWG 386
>gi|162312303|ref|NP_596601.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|26401571|sp|O60176.2|YG41_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23E6.01c
gi|157310462|emb|CAB83010.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe]
Length = 473
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 164/283 (57%), Gaps = 11/283 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+ E ++ + G+ V VK+IRN+ TG GY F+EF S A + +
Sbjct: 94 TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-S 152
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N P+P F+LNWAS G ++ +++IFVGDL+ +V ++ + F +RY S
Sbjct: 153 MNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNS 212
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK----- 255
K AK++ D T ++GYGFVRF DE++Q A+ EM G C RP+R+G AT K
Sbjct: 213 CKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPKSKAHVF 272
Query: 256 ---TVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 312
V P Y +Q D N+TVFVG L V++E L+ LF +G++V+V
Sbjct: 273 SPVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKYLFQNFGEIVYV 332
Query: 313 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
KIP GK CGFVQF +R AE A+ L G LG IRLSWGR+
Sbjct: 333 KIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRN 375
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 33/215 (15%)
Query: 148 MPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVV 207
M + E N +++G+ + T+++G+L VT+ +Q+ + + K K++
Sbjct: 67 MASNESGNSENTSNYGSSRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVK-VKLI 125
Query: 208 IDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM-----RIGPATNKKTVSGQQQ 262
+R TG GY FV F E AM+ N T + G +K++S +
Sbjct: 126 RNRYTGMNAGYCFVEFASPHEASSAMSMNNKPIPGTNHLFKLNWASGGGLREKSISKASE 185
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVKI------P 315
Y ++FVG+L V + + LF S+Y KI
Sbjct: 186 Y--------------------SIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTN 225
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 350
+ GFV+F D + + AL + G G + IR+
Sbjct: 226 VSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRV 260
>gi|19115155|ref|NP_594243.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe 972h-]
gi|3121946|sp|O13759.1|CSX1_SCHPO RecName: Full=RNA-binding post-transcriptional regulator csx1
gi|2656019|emb|CAB16569.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe]
Length = 632
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 167/284 (58%), Gaps = 13/284 (4%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQ--IEGYGFIEFISRAGAERVL 140
TLW+GDL+ WMD T++ +A E V VKV+R+K + + Y F++F S A AER L
Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERAL 145
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDD----TPDHTIFVGDLAADVTDYMLQETFRA 196
+N T +P F+LNWA+ G G + ++ P+ +IFVGDL D L TFR+
Sbjct: 146 MKYNNTMIPGAHCTFKLNWAT-GGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRS 204
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS AK+++D +TG ++ YGFVRF E EQ A+ M G C RP+RI A+ K
Sbjct: 205 IYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPKSR 264
Query: 257 VSGQQQYPK----ASYQNSQVAQ--SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
S S N Q Q DP NTTVFVG L S ++++ L+ F +G+++
Sbjct: 265 ASIAADSALGIVPTSTSNRQPNQDLCSMDPLNTTVFVGGLASNLSEKDLQVCFQPFGRIL 324
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
++KIP GK CGFVQ++++S AE+A+ + G +G +IRL+WG
Sbjct: 325 NIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGH 368
>gi|213406019|ref|XP_002173781.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|212001828|gb|EEB07488.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 680
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 186/337 (55%), Gaps = 44/337 (13%)
Query: 57 ATQAAAPQAAGVAVPP---QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKV 113
++++A+P A G+ PP +P + TLW+GDL+ WMD ++ +A GE V VK+
Sbjct: 63 SSRSASPAAYGL--PPLSFSADHKPND--TLWMGDLESWMDAAFIQQLWASLGETVHVKL 118
Query: 114 IRNKQTGQIEG---YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD 170
+R K + EG Y F++F S AE L +N T +P F+LNWA+ G +
Sbjct: 119 MRTKSSVS-EGCVSYCFVQFSSPQAAEYALLRYNNTIIPRTHSVFKLNWATGGGIQHSAK 177
Query: 171 T---PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
T P++++FVGDL + + L TF + YPS AK++ID +TG ++ YGFVRF DE
Sbjct: 178 TRREPEYSVFVGDLDPETHEAELYHTFHSVYPSCTSAKIIIDPVTGMSRKYGFVRFSDER 237
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPAT--NKKTVSGQQQYPKAS------------------ 267
EQ RA++EM G C RP+RI A+ ++ ++S P +
Sbjct: 238 EQQRALSEMQGYLCHGRPLRISVASPRSRTSISADSTTPTGAASTANGGAAASSSAVATG 297
Query: 268 -----YQNSQVAQSDD-----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG 317
+S Q D DP NTTVFVG L S T++ L FS +G ++++KIP G
Sbjct: 298 VTGVPSSSSSTRQPDQGLCSIDPFNTTVFVGGLFSGATEKDLFYHFSPFGNILNIKIPPG 357
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
K CGFVQ+ +++ AE+A+ M+ G +G +IRL+WG
Sbjct: 358 KGCGFVQYTEKAAAEKAITMMQGALVGPSHIRLAWGH 394
>gi|361131740|gb|EHL03392.1| putative Uncharacterized RNA-binding protein C23E6.01c [Glarea
lozoyensis 74030]
Length = 391
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 165/308 (53%), Gaps = 55/308 (17%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + GE V VK+IR+K +G GY FI+F S A A + L +
Sbjct: 74 TLWMGELEPWIDENFIRSVWFGMGEQVNVKMIRDKFSGN-AGYCFIDFSSPAAAAKAL-S 131
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
NG D P+ +IFVGDL +V +Y+L F+AR+PS K
Sbjct: 132 LNGD----------------------DRGPEFSIFVGDLGPEVNEYVLVSLFQARFPSCK 169
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
AK++ D ++G ++GYGFVRF DE +Q RA+TEM GV+C RPMRI AT K G
Sbjct: 170 SAKIMTDPISGMSRGYGFVRFADEQDQQRALTEMQGVYCGNRPMRISTATPKNKSGGAGG 229
Query: 263 Y------------------------------PKASYQNS-QVAQSDDDPNNTTVFVGNLD 291
P+ Y + Q DPNNTTVFVG L
Sbjct: 230 PAGMPMQGGGGMGGGQPGGMGAPGMYSMGAPPQLGYYGAPQPMNQFTDPNNTTVFVGGLS 289
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 290 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLS 349
Query: 352 WGRSPSNK 359
WGRS +N
Sbjct: 350 WGRSQNNS 357
>gi|297737425|emb|CBI26626.3| unnamed protein product [Vitis vinifera]
Length = 224
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 112/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 266 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 325
+S+QN+Q Q + DPNNTT+FVG LDS VTD++LR++FSQYG+LVHVKIP GKRCGFVQF
Sbjct: 35 SSFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQF 94
Query: 326 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYA 385
A+R+CAE+AL LNGTQLG Q+IRLSWGRSPSNKQAQPD QWN GYYGYAQGYE YGY
Sbjct: 95 ANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGYYGYAQGYEAYGY- 153
Query: 386 AAAPQDPSMYYGGYPGYGNYQQPQQ 410
A PQDP+MYYG YPGYGNYQQPQQ
Sbjct: 154 APPPQDPNMYYGAYPGYGNYQQPQQ 178
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 75 QGQPGEI----RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
QG GE T+++G L + + YL F+ GE+V VK+ K+ GF++F
Sbjct: 41 QGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRC------GFVQF 94
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNW 159
+RA AE+ L NGT + G Q+ RL+W
Sbjct: 95 ANRACAEQALAGLNGTQL--GAQSIRLSW 121
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Query: 146 TPMPNGEQNFRLNWASF--GAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPSTK 202
P+ N NF+L ++SF G + + P++T IFVG L ++VTD L++ F ++Y
Sbjct: 22 VPVGNFASNFQL-FSSFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVF-SQYGELV 79
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
K+ + K GFV+F + + +A+ +NG + +R+
Sbjct: 80 HVKIPVG------KRCGFVQFANRACAEQALAGLNGTQLGAQSIRL 119
>gi|407925486|gb|EKG18497.1| hypothetical protein MPH_04299 [Macrophomina phaseolina MS6]
Length = 311
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/259 (44%), Positives = 151/259 (58%), Gaps = 24/259 (9%)
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDL 181
GY F++F + A + L T NG +PN + F+LNWAS G ++RDD P+++IFVGDL
Sbjct: 17 GYCFVDFQTPEAAAKAL-TLNGQMIPNSNRPFKLNWASGGGLQDRRDDRGPEYSIFVGDL 75
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+V +Y+L F+ +YPS K AK++ D ++G ++GYGFVRF DESEQ RA+ EM GV+C
Sbjct: 76 GPEVNEYVLVSLFQGKYPSCKSAKIMSDPISGMSRGYGFVRFSDESEQQRALNEMQGVYC 135
Query: 242 STRPMRIGPATNKK---------------------TVSGQQQYPKASYQNSQVAQSDDDP 280
RPMRI AT K + G P Y Q DP
Sbjct: 136 GNRPMRISTATPKNKSGGGPGAGPMGGMHGGPGPVGMYGMGAPPLGYYGAPQPMNQFTDP 195
Query: 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 340
NNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G
Sbjct: 196 NNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQG 255
Query: 341 TQLGGQNIRLSWGRSPSNK 359
+G +RLSWGRS +N
Sbjct: 256 YPIGNSRVRLSWGRSQNNS 274
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L ++ E L + F GE+ VK+ K G GF++F+ R AE +
Sbjct: 199 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQ 252
Query: 143 FNGTPMPNGEQNFRLNWA 160
G P+ G RL+W
Sbjct: 253 MQGYPI--GNSRVRLSWG 268
>gi|242042652|ref|XP_002459197.1| hypothetical protein SORBIDRAFT_02g000370 [Sorghum bicolor]
gi|241922574|gb|EER95718.1| hypothetical protein SORBIDRAFT_02g000370 [Sorghum bicolor]
Length = 238
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 133/199 (66%), Gaps = 23/199 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R+LWIG L +WMDE YL CF + E+++V + R+KQTGQ EG+GF+ F A ++L+
Sbjct: 36 RSLWIGGLLHWMDEDYLYACFTTSPELLSVVIRRSKQTGQSEGFGFLNFADHTTAAQILK 95
Query: 142 TFNGTPMPNGEQNFRLNWAS------------FGAG--------EKRDD---TPDHTIFV 178
++NG MPN Q+F+LNWA+ F ++ DD + +H IFV
Sbjct: 96 SYNGHKMPNSVQDFKLNWATQQPAPDKLPDPHFKLDPAMQQDVPQRHDDDNSSSEHFIFV 155
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDLA DVT+YML F+ RY S K AK+++DR TGR+KGYGFV+FGD +EQ +A+TEMNG
Sbjct: 156 GDLAYDVTEYMLHHLFKTRYASVKRAKIIVDRFTGRSKGYGFVQFGDVNEQTQALTEMNG 215
Query: 239 VFCSTRPMRIGPATNKKTV 257
+CSTRPMRIGP NKK+
Sbjct: 216 AYCSTRPMRIGPVPNKKST 234
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL--TGRTKGYGFVRFGDESEQLRA 232
++++G L + + L F S + VVI R TG+++G+GF+ F D + +
Sbjct: 37 SLWIGGLLHWMDEDYLYACFTT---SPELLSVVIRRSKQTGQSEGFGFLNFADHTTAAQI 93
Query: 233 MTEMNG--VFCSTRPMRIGPATNKKTVSGQQQYPKASYQ-----NSQVAQSDDDPNNTT- 284
+ NG + S + ++ AT + + P ++ V Q DD N+++
Sbjct: 94 LKSYNGHKMPNSVQDFKLNWATQQP---APDKLPDPHFKLDPAMQQDVPQRHDDDNSSSE 150
Query: 285 --VFVGNLDSIVTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEAL 335
+FVG+L VT+ L LF ++Y + KI K GFVQF D + +AL
Sbjct: 151 HFIFVGDLAYDVTEYMLHHLFKTRYASVKRAKIIVDRFTGRSKGYGFVQFGDVNEQTQAL 210
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQAQP 363
+NG + +R+ G P+ K P
Sbjct: 211 TEMNGAYCSTRPMRI--GPVPNKKSTYP 236
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRM 337
++++G L + +++L F+ +L+ V I K+ G F+ FAD + A + L+
Sbjct: 37 SLWIGGLLHWMDEDYLYACFTTSPELLSVVIRRSKQTGQSEGFGFLNFADHTTAAQILKS 96
Query: 338 LNGTQL--GGQNIRLSWGRSPSNKQAQPDPN 366
NG ++ Q+ +L+W PDP+
Sbjct: 97 YNGHKMPNSVQDFKLNWATQQPAPDKLPDPH 127
>gi|363755816|ref|XP_003648124.1| hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891324|gb|AET41307.1| Hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
Length = 602
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/309 (40%), Positives = 170/309 (55%), Gaps = 42/309 (13%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++GDL E + +A GE V VK+I+N GY F+EF S A L
Sbjct: 55 LYMGDLDASWTENDIKQIWATLGEPNVQVKLIKNSGPMNNSGYCFVEFPSNLSATNALLK 114
Query: 143 FNGTPMP-NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
G P+P + ++ +LNWASF + +IFVGDLA +V++ L E F +RY ST
Sbjct: 115 -TGLPIPVDPSRSLKLNWASFATAPGTE----FSIFVGDLAPNVSESQLFELFISRYSST 169
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT----- 256
AK+V D++TG +KGYGFV+FG+E+EQ R++ EM GVF + R +R+ + K+
Sbjct: 170 LNAKIVFDQVTGVSKGYGFVKFGNEAEQQRSLVEMQGVFLNGRAIRVSTTSKNKSRFRGG 229
Query: 257 -------------------VSG--QQQYPKASYQNSQ---------VAQSDDDPNNTTVF 286
+SG Q P+ Q SQ V DPNNTTVF
Sbjct: 230 LSGTVTSAAAATAGPPVGNLSGVIQTSSPQTLPQQSQFIYPVQQQPVLSQFTDPNNTTVF 289
Query: 287 VGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
+G L S+VT+E LR F +GQ+V+VKIP GK CGFVQ+ DRS AE A+ + G +G
Sbjct: 290 IGGLSSLVTEEELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKMQGFPIGNS 349
Query: 347 NIRLSWGRS 355
IRLSWGRS
Sbjct: 350 RIRLSWGRS 358
>gi|212722006|ref|NP_001131810.1| uncharacterized protein LOC100193183 [Zea mays]
gi|194692604|gb|ACF80386.1| unknown [Zea mays]
Length = 236
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 128/195 (65%), Gaps = 20/195 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R+LWIG L WMDE YL CF + E++++ + RNKQTGQ EG+GF++F A +L+
Sbjct: 37 RSLWIGGLLPWMDEDYLYGCFTTSRELLSLVIKRNKQTGQSEGFGFLKFSDHTAAAHILK 96
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKR--------------------DDTPDHTIFVGDL 181
++NG MPN Q+F+LNWA+ K+ D + DH+IFVGDL
Sbjct: 97 SYNGQKMPNAVQDFKLNWATQQPAPKKLPDPDFKLDLATQQERHAAVDSSSDHSIFVGDL 156
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
A +VT YML F+ARYPS K AK++ D+ TG +K YGFV+FGD EQ++A+TEMNG +C
Sbjct: 157 AYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVDEQIQALTEMNGAYC 216
Query: 242 STRPMRIGPATNKKT 256
STRPMRIGP KK+
Sbjct: 217 STRPMRIGPVPKKKS 231
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 19/171 (11%)
Query: 206 VVIDR--LTGRTKGYGFVRFGDESEQLRAMTEMNG--VFCSTRPMRIGPATN----KKTV 257
+VI R TG+++G+GF++F D + + NG + + + ++ AT KK
Sbjct: 66 LVIKRNKQTGQSEGFGFLKFSDHTAAAHILKSYNGQKMPNAVQDFKLNWATQQPAPKKLP 125
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS------QYGQLVH 311
+ A+ Q A D ++ ++FVG+L VT L +F + +++
Sbjct: 126 DPDFKLDLATQQERHAAV--DSSSDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSAKIIF 183
Query: 312 VKIPAGKRC-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
K +C GFVQF D +AL +NG + +R+ G P K A
Sbjct: 184 DKFTGLSKCYGFVQFGDVDEQIQALTEMNGAYCSTRPMRI--GPVPKKKSA 232
>gi|320584167|gb|EFW98378.1| RNA-binding post-transcriptional regulator csx1 [Ogataea
parapolymorpha DL-1]
Length = 485
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 135/343 (39%), Positives = 189/343 (55%), Gaps = 40/343 (11%)
Query: 45 PPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYL----NT 100
P + A PPA TQ++ Q G + Q P LW+GDL DET + ++
Sbjct: 14 PNKSSASPPASQYTQSS--QLNGQSNGQQNAQTP----QLWMGDLDQRWDETTIKQIWSS 67
Query: 101 CFAHTGEVV-AVKVIRNKQTGQIE----GYGFIEFISRAGAERVLQTFNGTPMP--NGEQ 153
A G +V +VK+IR+KQ+ +E GY FI F + +VL+ FNG P+P N +
Sbjct: 68 VLAPLGILVHSVKLIRDKQSMNLELANAGYCFIRFHNFEDCYKVLELFNGKPIPGTNNVR 127
Query: 154 NFRLNWASFGAGEKRDDT------PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVV 207
FRLNW+S + +++IFVGDL VT+ L + F+ARYPS GAKV+
Sbjct: 128 FFRLNWSSANSSGANATAFQPKGQSEYSIFVGDLPQTVTEQSLLQAFQARYPSCSGAKVM 187
Query: 208 IDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS--------- 258
ID TG KGYGFV+F +E++Q RA+ EM G RP+R+ A+ +T +
Sbjct: 188 IDPATGHLKGYGFVKFLNETDQKRALIEMQGYVLLGRPIRVSTASKSQTNAAANSSFASA 247
Query: 259 -------GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 311
GQ + S + Q +DPNNTTVF+G L+ +++ LR LFS+YG + +
Sbjct: 248 MPSQDGLGQLKVNVPSLPQTAPLQYYNDPNNTTVFIGGLNVPISEMQLRALFSRYGDISY 307
Query: 312 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQL-GGQNIRLSWG 353
VKIP GK CGFVQF R+ AE A+ + G + GG IR+SWG
Sbjct: 308 VKIPPGKNCGFVQFFHRASAEMAISEMQGYDIGGGCRIRVSWG 350
>gi|302307679|ref|NP_984403.2| ADR307Wp [Ashbya gossypii ATCC 10895]
gi|299789115|gb|AAS52227.2| ADR307Wp [Ashbya gossypii ATCC 10895]
Length = 566
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 125/309 (40%), Positives = 169/309 (54%), Gaps = 45/309 (14%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++GDL E + +A GE V VK+I+N G GY F+EF S A L
Sbjct: 54 LYMGDLDPSWTEGDIKQIWATLGEANVQVKLIKNSSGGGNSGYCFVEFPSNLAATNALLK 113
Query: 143 FNGTPMP-NGEQNFRLNWASFGAGEKRDDTP--DHTIFVGDLAADVTDYMLQETFRARYP 199
G P+P + + +LNWASF TP + +IFVGDLA +VT+ L E F +RY
Sbjct: 114 -TGLPIPVDASRTLKLNWASFAT------TPGSEFSIFVGDLAPNVTESQLFELFISRYS 166
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK---- 255
ST AK+V D+ TG +KGYGFV+FG+E+EQ R++ EM GVF + R +R+ + K
Sbjct: 167 STLNAKIVFDQGTGVSKGYGFVKFGNEAEQQRSLLEMQGVFLNGRAIRVSTTSKNKSRFQ 226
Query: 256 -----------------------------TVSGQQQYPKASYQNSQVAQSDDDPNNTTVF 286
T+ Q Q+ Q ++Q D PNNTTVF
Sbjct: 227 SGNPASAAPASPASTAVNSPGLAQGSNVQTLLQQSQFIYPVQQQPALSQFAD-PNNTTVF 285
Query: 287 VGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
+G L S+VT++ LR F +GQ+V+VKIP GK CGFVQ+ DRS AE A+ + G +G
Sbjct: 286 IGGLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKMQGFPIGNS 345
Query: 347 NIRLSWGRS 355
+RLSWGRS
Sbjct: 346 RVRLSWGRS 354
>gi|413918498|gb|AFW58430.1| nucleic acid binding protein, partial [Zea mays]
Length = 241
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 94/145 (64%), Positives = 114/145 (78%), Gaps = 1/145 (0%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +T+W+GDLQYWMDE YL+ CF +GEVV +KVIRN+QTGQ EGYGF+EF S A AE+
Sbjct: 97 ENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKA 156
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ F G MPN ++ F+LNWAS+ GEKR + DH+IFVGDLAADVTD ML E F ++Y
Sbjct: 157 LQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKY 216
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRF 223
S KGAKV+ID TGR++GYGFVRF
Sbjct: 217 RSVKGAKVIIDANTGRSRGYGFVRF 241
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTK--GAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ TI+VGDL + + L F PS + KV+ +R TG+++GYGFV F +
Sbjct: 98 NKTIWVGDLQYWMDENYLHNCFG---PSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAE 154
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNL 290
+A+ G + P T++ Y + S+VA ++ ++FVG+L
Sbjct: 155 KALQNFTG--------HVMPNTDRPFKLNWASYSMGE-KRSEVA------SDHSIFVGDL 199
Query: 291 DSIVTDEHLRELFSQ-----YGQLVHVKIPAGKR--CGFVQF 325
+ VTDE L ELFS G V + G+ GFV+F
Sbjct: 200 AADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRF 241
>gi|374107618|gb|AEY96526.1| FADR307Wp [Ashbya gossypii FDAG1]
Length = 565
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 125/309 (40%), Positives = 170/309 (55%), Gaps = 45/309 (14%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++GDL E + +A GE V VK+I+N G GY F+EF S A L
Sbjct: 54 LYMGDLDPSWTEGDIKQIWATLGEANVQVKLIKNSSGGGNSGYCFVEFPSNLAATNALLK 113
Query: 143 FNGTPMP-NGEQNFRLNWASFGAGEKRDDTP--DHTIFVGDLAADVTDYMLQETFRARYP 199
G P+P + + +LNWASF TP + +IFVGDLA +VT+ L E F +RY
Sbjct: 114 -TGLPIPVDASRTLKLNWASFAT------TPGSEFSIFVGDLAPNVTESQLFELFISRYS 166
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT------- 252
ST AK+V D+ TG +KGYGFV+FG+E+EQ R++ EM GVF + R +R+ +
Sbjct: 167 STLNAKIVFDQGTGVSKGYGFVKFGNEAEQQRSLLEMQGVFLNGRAIRVSTTSKNKSRFQ 226
Query: 253 --------------------------NKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVF 286
N +T+ Q Q+ Q ++Q D PNNTTVF
Sbjct: 227 SGNPASAAPASPASTAVNSPGLAQGSNVQTLLQQSQFIYPVQQQPALSQFAD-PNNTTVF 285
Query: 287 VGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
+G L S+VT++ LR F +GQ+V+VKIP GK CGFVQ+ DRS AE A+ + G +G
Sbjct: 286 IGGLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKMQGFPIGNS 345
Query: 347 NIRLSWGRS 355
+RLSWGRS
Sbjct: 346 RVRLSWGRS 354
>gi|255714705|ref|XP_002553634.1| KLTH0E03520p [Lachancea thermotolerans]
gi|238935016|emb|CAR23197.1| KLTH0E03520p [Lachancea thermotolerans CBS 6340]
Length = 516
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/316 (40%), Positives = 168/316 (53%), Gaps = 47/316 (14%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEG-YGFIEFISRAGAERVL 140
+L++GDL DE + +A+ GE V VK+IRN + Y F+EF S A L
Sbjct: 44 SLYMGDLDPSWDENAIRAVWANLGEPNVQVKLIRNSGSTGGSSGYCFVEFPSHLNASNAL 103
Query: 141 QTFNGTPMPNGEQNF-RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +PN + +LNWASF + H++FVGD+A +V++ L E F +RY
Sbjct: 104 LK-NGLLIPNARNRYLKLNWASFATAPGNE----HSVFVGDIAPNVSEAQLFELFISRYA 158
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI----------- 248
ST AK+V D++TG +KGYGFV+FG ESEQ RA+ EM GVF + R +R+
Sbjct: 159 STLNAKIVFDQMTGVSKGYGFVKFGQESEQQRALLEMQGVFLNGRAVRVSTTSKNRSKFQ 218
Query: 249 -----------------------GPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTV 285
PA N V Q YP Q DPNNTTV
Sbjct: 219 QPLQQQQQPYMQQQQPYVQQQARAPAFNNGNVQSQFIYP---VQQQPTLTQYTDPNNTTV 275
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
F+G L S+V+++ LR F +G +V+VKIP GK CGFVQ+ DR AE A+ + G +G
Sbjct: 276 FIGGLSSLVSEDELRAYFQPFGSIVYVKIPVGKGCGFVQYVDRISAETAIAKMQGYPIGN 335
Query: 346 QNIRLSWGRSPSNKQA 361
IRLSWGRS KQA
Sbjct: 336 SRIRLSWGRSA--KQA 349
>gi|320580282|gb|EFW94505.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 398
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 170/313 (54%), Gaps = 29/313 (9%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-----GY 125
PP+ RTLW+GD++ W +E ++ +A T + V VKVI+ +Q + GY
Sbjct: 17 PPENPANTVPSRTLWMGDIEPWWNEEFITDVWAKTNKRVLVKVIKPRQNALVHQLAHSGY 76
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNG-EQNFRLNWASFGA-GEKRDDTPDHTIFVGDLAA 183
F+EF + A+ L+ NGT +PN ++ FRLNWAS + TP++++FVGDL+
Sbjct: 77 CFVEFETPEDAKEALK-LNGTIIPNTTDKLFRLNWASAATLNSQIAQTPEYSLFVGDLSP 135
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
T+ L F+ + + K +V+ D TG ++ +GFVRF + ++ +A+ EMNG +
Sbjct: 136 ATTEAHLLALFQTHFSTVKTVRVMTDPATGLSRCFGFVRFSSDEDRQKALVEMNGKWLDG 195
Query: 244 RPMRIGPATNKKTVSGQQQY------------------PKASYQNSQVAQSDDDPNNTTV 285
R +R+ AT K QQ+ P Y Q + DP NTTV
Sbjct: 196 RLIRVALATPKHQ---NQQFRKHQIPMELDPYHAPGLPPIGYYAAPQPPPAYSDPTNTTV 252
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
FVG L + +T+ L +F YGQ+VHVK+P GK CGFV+F R+ AE A+ L G + G
Sbjct: 253 FVGGLSNNITEATLLSIFEPYGQIVHVKVPPGKGCGFVKFTQRTDAERAIEQLQGYVIDG 312
Query: 346 QNIRLSWGRSPSN 358
+RLSWGRS N
Sbjct: 313 SRVRLSWGRSNRN 325
>gi|414592072|tpg|DAA42643.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
Length = 235
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 127/195 (65%), Gaps = 21/195 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R+LWIG L WMDE YL CF + E++++ + RNKQTGQ EG+GF++F A +L+
Sbjct: 37 RSLWIGGLLPWMDEDYLYGCFTTSRELLSLVIKRNKQTGQSEGFGFLKFSDHTAAAHILK 96
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKR--------------------DDTPDHTIFVGDL 181
++NG MPN Q+F+LNWA+ K+ D + DH+IFVGDL
Sbjct: 97 SYNGQKMPNAVQDFKLNWATQQPAPKKLPDPDFKLDLATQQERHAAVDSSSDHSIFVGDL 156
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
A +VT YML F+ARYPS K AK++ D+ TG +K YGFV+FGD EQ++ +TEMNG +C
Sbjct: 157 AYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVDEQIQ-LTEMNGAYC 215
Query: 242 STRPMRIGPATNKKT 256
STRPMRIGP KK+
Sbjct: 216 STRPMRIGPVPKKKS 230
>gi|125586871|gb|EAZ27535.1| hypothetical protein OsJ_11490 [Oryza sativa Japonica Group]
Length = 171
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/142 (70%), Positives = 116/142 (81%), Gaps = 3/142 (2%)
Query: 266 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 325
++YQN+Q SD DPNNTTVFVG LD VTDE L++ FS YG+LV+VKIP GKRCGFVQ+
Sbjct: 16 STYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQY 75
Query: 326 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGY-AQGYENYGY 384
++R+ AEEA+RMLNG+QLGGQ+IRLSWGRSP NKQ Q D NQWNAGYYGY QGY+ YGY
Sbjct: 76 SNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQGYDPYGY 135
Query: 385 AAAAPQDPSMY-YGGYPGYGNY 405
PQDP+MY Y YPGYGNY
Sbjct: 136 -VRPPQDPAMYAYAAYPGYGNY 156
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + + L F+ GE+V VK+ K+ G F+++ +RA AE ++
Sbjct: 34 TVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCG------FVQYSNRASAEEAIRM 87
Query: 143 FNGTPMPNGEQNFRLNWA 160
NG+ + G Q+ RL+W
Sbjct: 88 LNGSQL--GGQSIRLSWG 103
>gi|449472161|ref|XP_004153512.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
[Cucumis sativus]
Length = 176
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 95/123 (77%), Positives = 104/123 (84%), Gaps = 3/123 (2%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P Q E+RTLWIGDLQYWMDE Y+ CFAHTGEV +VKVIRNKQTGQ EGYGFIEF+
Sbjct: 56 PPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFL 115
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYML 190
+R AERVLQT+NGT MPNG QNFRLNWAS AGEKR DD+PD+TIFVGDLA DVTDY+L
Sbjct: 116 TRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVL 173
Query: 191 QET 193
QET
Sbjct: 174 QET 176
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRM 337
T+++G+L + + ++ F+ G++ VK+ K+ GF++F R AE L+
Sbjct: 67 TLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQT 126
Query: 338 LNGTQL--GGQNIRLSWGRSPSNKQ 360
NGT + G QN RL+W + +Q
Sbjct: 127 YNGTAMPNGAQNFRLNWASAGEKRQ 151
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
T+++GDL + + + F A KV+ ++ TG+++GYGF+ F R +
Sbjct: 66 RTLWIGDLQYWMDENYIFNCF-AHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVL 124
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSI 293
NG + P +G Q + + ++ ++ + DD P + T+FVG+L
Sbjct: 125 QTYNG---TAMP------------NGAQNF-RLNWASAGEKRQDDSP-DYTIFVGDLAGD 167
Query: 294 VTDEHLRE 301
VTD L+E
Sbjct: 168 VTDYVLQE 175
>gi|449471209|ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
[Cucumis sativus]
Length = 156
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/130 (80%), Positives = 117/130 (90%), Gaps = 2/130 (1%)
Query: 267 SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 326
SYQN Q AQ+++DPNNTT+FVGNLD+ VTDEHLR++F QYG+LVHVKIP GKRCGFVQFA
Sbjct: 1 SYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFA 60
Query: 327 DRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN-AGYYGYAQGYENYGYA 385
DR+CAEEALR+LNGTQ+GGQNIRLSWGRSPSNKQ Q DPNQWN GYYGY QGYENY Y
Sbjct: 61 DRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGYYGYGQGYENYSY- 119
Query: 386 AAAPQDPSMY 395
A APQDP+M+
Sbjct: 120 APAPQDPNMF 129
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G+L + + +L F GE+V VK+ K+ GF++F R AE L+
Sbjct: 18 TIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRC------GFVQFADRNCAEEALRV 71
Query: 143 FNGTPMPNGEQNFRLNWA 160
NGT + G QN RL+W
Sbjct: 72 LNGTQI--GGQNIRLSWG 87
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 166 EKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
+ +D + TIFVG+L A+VTD L++ F +Y K+ + K GFV+F D
Sbjct: 9 QNENDPNNTTIFVGNLDANVTDEHLRQVF-GQYGELVHVKIPV------GKRCGFVQFAD 61
Query: 226 ESEQLRAMTEMNGVFCSTRPMRI 248
+ A+ +NG + +R+
Sbjct: 62 RNCAEEALRVLNGTQIGGQNIRL 84
>gi|384495849|gb|EIE86340.1| hypothetical protein RO3G_11051 [Rhizopus delemar RA 99-880]
Length = 1099
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 160/282 (56%), Gaps = 25/282 (8%)
Query: 86 IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
+G+L WMDE YL + + G V+ ++ +K Y FI+F++R A + L TFNG
Sbjct: 1 MGELDSWMDENYLRQLWWNLGHEVSCRISVDKYGAN---YAFIDFLTREAASKSLITFNG 57
Query: 146 TPMPNGEQNFRLNWASFGAG---------EKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
T +PN + F+LNW++ + + D+ IFVGDL ADV D +L TF++
Sbjct: 58 TQIPNTNKVFKLNWSNRDSNGMPLLQRPTLMSNFLGDYCIFVGDLRADVDDNILLTTFQS 117
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
RY S AKV++D TG +KG+GFV+F DE EQ R++ EM G + + +R+ A
Sbjct: 118 RYKSAASAKVMVDPATGFSKGFGFVKFFDEIEQKRSLEEMQGAYVGSSRIRVSVAR---- 173
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 316
PKA + V ++ TTVFVG L++ +T+E LR F +G +V VKI
Sbjct: 174 -------PKAKIETGPVVSGPEEI--TTVFVGGLNNTITEEELRAYFGTFGNIVAVKIIP 224
Query: 317 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
K F+Q+ +S AE+A+ LNG+ LGG +RLS+GR+ N
Sbjct: 225 LKNIAFIQYEKKSSAEQAISELNGSHLGGAKLRLSFGRTQLN 266
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 84 LWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++GDL+ +D+ L T F + + KV+ + TG +G+GF++F +R L+
Sbjct: 97 IFVGDLRADVDDNILLTTFQSRYKSAASAKVMVDPATGFSKGFGFVKFFDEIEQKRSLEE 156
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTP-------DHTIFVGDLAADVTDYMLQETFR 195
G + G R++ A A K + P T+FVG L +T +E R
Sbjct: 157 MQGAYV--GSSRIRVSVARPKA--KIETGPVVSGPEEITTVFVGGLNNTIT----EEELR 208
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
A Y T G V + + K F+++ +S +A++E+NG +R+ +
Sbjct: 209 A-YFGTFGNIVAVKIIP--LKNIAFIQYEKKSSAEQAISELNGSHLGGAKLRLSFGRTQL 265
Query: 256 TVSGQQQYPKASYQ 269
V+ Y +SYQ
Sbjct: 266 NVNPSAHYVPSSYQ 279
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
Query: 60 AAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
+ A A + P G P EI T+++G L + E L F G +VAVK+I
Sbjct: 170 SVARPKAKIETGPVVSG-PEEITTVFVGGLNNTITEEELRAYFGTFGNIVAVKII----- 223
Query: 120 GQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG 163
++ FI++ ++ AE+ + NG+ + G RL SFG
Sbjct: 224 -PLKNIAFIQYEKKSSAEQAISELNGSHL--GGAKLRL---SFG 261
>gi|294463675|gb|ADE77364.1| unknown [Picea sitchensis]
Length = 253
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/198 (56%), Positives = 132/198 (66%), Gaps = 20/198 (10%)
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSGQQQY-PKASYQN-------SQVAQSDDDPNNTT 284
MTEMN V+CSTRPMRI AT KK+ QQQY PK +YQ +QV QSDD NNTT
Sbjct: 1 MTEMNNVYCSTRPMRISAATPKKSAGFQQQYTPKVAYQTPAYSAPPAQVFQSDDQ-NNTT 59
Query: 285 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 344
+FVG LD V+DE LR++F Q+G+LV+VKIP K CGFVQF +R+CAEEAL+ ++GT +G
Sbjct: 60 IFVGGLDPTVSDEDLRQIFGQFGELVYVKIPVNKGCGFVQFGNRACAEEALQRVHGTVIG 119
Query: 345 GQNIRLSWGRSPSNKQAQP--------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY- 395
Q +RLSWGRSP+ KQ QP D NQWN Y G Y AAPQDPS Y
Sbjct: 120 QQTVRLSWGRSPATKQDQPAGWGQAQADANQWNGA--YYGYGQGYDAYGYAAPQDPSTYG 177
Query: 396 YGGYPGYGNYQQPQQPQQ 413
YG YP GNYQQ + Q+
Sbjct: 178 YGAYPSSGNYQQQTEVQE 195
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + + L F GE+V VK+ NK G GF++F +RA AE LQ
Sbjct: 59 TIFVGGLDPTVSDEDLRQIFGQFGELVYVKIPVNK------GCGFVQFGNRACAEEALQR 112
Query: 143 FNGTPMPNGEQNFRLNW 159
+GT + G+Q RL+W
Sbjct: 113 VHGTVI--GQQTVRLSW 127
>gi|210075649|ref|XP_502423.2| YALI0D04917p [Yarrowia lipolytica]
gi|199425763|emb|CAG80611.2| YALI0D04917p [Yarrowia lipolytica CLIB122]
Length = 430
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/314 (37%), Positives = 166/314 (52%), Gaps = 49/314 (15%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHT---GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
+ T+++GDL+ WMDE + +A + VK+IR+K T I YGFI+F S A
Sbjct: 1 MSTIYMGDLEPWMDEAAIKNMWAQVMGPDTNINVKLIRDKFTDSIN-YGFIDFASPELAA 59
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP--DHTIFVGDLAADVTDYMLQETFR 195
L+ FNG P+P ++ F+L GE D + +IFVGDLA + T+ L + F+
Sbjct: 60 AALK-FNGKPIPGTDRLFKL-------GEDNGDGAPVEFSIFVGDLAPESTEPELLQAFK 111
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
+RY S + AK++ D +TG ++GYGFVRF E +Q +A+ EM G +RP+R+ AT K
Sbjct: 112 SRYESCRAAKIMTDPVTGLSRGYGFVRFSSEEDQQKALQEMQGYMLGSRPLRVSTATPKN 171
Query: 256 TVSGQ--------------------QQYPKASYQN----SQVAQ-----------SDDDP 280
Q Q+P + N QV Q D
Sbjct: 172 RHHHQPYMQFQPQQFQPPAHYQQLHSQHPFPHHPNGAPSHQVHQPFYGGPAHPLNQFTDA 231
Query: 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 340
NNTTVFVG L S V+++ LR+ F +G + +VKIP GK CGFVQ+ R AE A+ + G
Sbjct: 232 NNTTVFVGGLSSSVSEDELRQYFQGFGDITYVKIPPGKGCGFVQYVQRQSAEMAITQMQG 291
Query: 341 TQLGGQNIRLSWGR 354
+G +RLSWGR
Sbjct: 292 YPIGNGRVRLSWGR 305
>gi|449471357|ref|XP_004153285.1| PREDICTED: polyadenylate-binding protein RBP47B-like, partial
[Cucumis sativus]
Length = 218
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/128 (69%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P++QG E++TLWIGDLQ WMDETYLN CFAHTGEV +VKVI NKQTGQ EGYGF+EF
Sbjct: 90 PRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFF 149
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYML 190
S AE+VLQ +NGT MPN E FRLNWA+F A ++R DT D +IFVGDLAADVTD +L
Sbjct: 150 SHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAIL 209
Query: 191 QETFRARY 198
QETF +RY
Sbjct: 210 QETFSSRY 217
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + + L F A KV+ ++ TG+++GYGFV F + + +
Sbjct: 101 TLWIGDLQPWMDETYLNNCF-AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQ 159
Query: 235 EMNGVFC--STRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDS 292
NG + P R+ N T S + P D ++ ++FVG+L +
Sbjct: 160 NYNGTIMPNTELPFRL----NWATFSANDRRP-------------DTGSDLSIFVGDLAA 202
Query: 293 IVTDEHLRELFS 304
VTD L+E FS
Sbjct: 203 DVTDAILQETFS 214
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRM 337
T+++G+L + + +L F+ G++ VK+ K+ GFV+F + AE+ L+
Sbjct: 101 TLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQN 160
Query: 338 LNGTQLGGQNI--RLSWGRSPSNKQAQPD 364
NGT + + RL+W +N + +PD
Sbjct: 161 YNGTIMPNTELPFRLNWATFSANDR-RPD 188
>gi|406602666|emb|CCH45778.1| Nucleolysin TIA-1 isoform [Wickerhamomyces ciferrii]
Length = 485
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 171/336 (50%), Gaps = 62/336 (18%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTG-EVVAVKVIRNK--QTGQIEGYGFIEFISRAGAERVL 140
LW+G+L + DE + + + G + VK+I+ K Q GY FIEF + A L
Sbjct: 43 LWMGELDPFWDENSIKSIWLSLGFNNINVKLIKEKIQQGFNNAGYCFIEFPNIEQASNAL 102
Query: 141 QTFNGTPMPNGEQNFRLNWASFG---------------AGEKRDDTPDHTIFVGDLAADV 185
+ NG +PN ++ +LNWAS G G R++ +IFVGDLA DV
Sbjct: 103 NS-NGLKIPNTNKSLKLNWASGGQNSNNHNNNNNNNGSIGYNRNEV---SIFVGDLAPDV 158
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+D +L E F ++YPS G K++ID LTG +KGYGFVRF +E EQ RA+ EM G + RP
Sbjct: 159 SDTILYEYFGSKYPSVSGTKIMIDSLTGGSKGYGFVRFINELEQKRALVEMQGAILNGRP 218
Query: 246 MRIGPATNKK-----------TVSGQQQYPKASYQNSQ---------------------- 272
+R+ A K +G Q + + + N+
Sbjct: 219 IRVSTAVPKNRQQQQGQQQGGGFNGNQGFNGSRFNNNLQPLQSSIPSSSGPSQQILNGLE 278
Query: 273 ------VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 326
+ Q D N T VF+G L SIVT++ LR F +G + +VKIP GK CGFVQ+
Sbjct: 279 SQYQPPLTQFTDPNNTT-VFIGGLSSIVTEDELRLYFQPFGDITYVKIPVGKGCGFVQYV 337
Query: 327 DRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
RS AE A+ + G +G IRLSWGRS SN + Q
Sbjct: 338 TRSSAELAISKMQGYPIGNSRIRLSWGRSNSNPKPQ 373
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
PP Q T++IG L + E L F G++ VK+ K G GF+++
Sbjct: 283 PPLTQFTDPNNTTVFIGGLSSIVTEDELRLYFQPFGDITYVKIPVGK------GCGFVQY 336
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
++R+ AE + G P+ G RL+W
Sbjct: 337 VTRSSAELAISKMQGYPI--GNSRIRLSWG 364
>gi|254566455|ref|XP_002490338.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|238030134|emb|CAY68057.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|328350732|emb|CCA37132.1| Uncharacterized RNA-binding protein C23E6.01c [Komagataella
pastoris CBS 7435]
Length = 506
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 175/338 (51%), Gaps = 42/338 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT-----------GQIEGYGFIEF 130
RTLW+GDL+ W E + + G+ V VK+IR++ Q GY F+EF
Sbjct: 52 RTLWMGDLEPWWVEENIIQLWQQLGQSVRVKLIRSRHNRSPNPNSSLPPPQNAGYCFVEF 111
Query: 131 ISRAGAERVLQTFNGTPMPNGE-QNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDY 188
A + L NG+ +P + FRLNWAS + + TP +++FVGDL+ T+
Sbjct: 112 ERHEDALQAL-ALNGSIVPRSSGRLFRLNWASGPTLQSQIPPTPQYSLFVGDLSPSTTEA 170
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
L F+ Y S + +V+ D TG ++ +GFVRF +E ++ RA+ EM+G++ RP+R+
Sbjct: 171 HLLALFQPNYSSIQSVRVMTDPATGSSRCFGFVRFTEEEDRQRALHEMSGIWLGGRPIRV 230
Query: 249 GPATNK----KTVSGQQQY---------PKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 295
AT + + V QQ P+ + NS +DP N+TVFVG L + V+
Sbjct: 231 ALATPRGAGHQPVQMQQHLQYAPSAPMVPQFASNNSSSRNIYNDPTNSTVFVGGLAAGVS 290
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
+E L LF +G + +KIP GK CGFV+F+ R AE A+ ++G +GG +RLSWGRS
Sbjct: 291 EETLFTLFEPFGSISSIKIPRGKGCGFVKFSTREEAENAISGMHGFLIGGSRVRLSWGRS 350
Query: 356 ------------PSNKQAQP---DPNQWNAGYYGYAQG 378
P + P DP N G YG G
Sbjct: 351 SLPNQHTHSHPHPQHLMMSPGVFDPMGRNGGMYGIPPG 388
>gi|409079460|gb|EKM79821.1| hypothetical protein AGABI1DRAFT_57019, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 366
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 163/302 (53%), Gaps = 39/302 (12%)
Query: 93 MDETYLN-TCFAHTGEVVAVKVIR---NKQTGQIE---GYGFIEFISRAGAERVLQTFNG 145
MDE Y C E + +KV + + TGQ GY F+ F + A A V N
Sbjct: 1 MDEEYAKQVCKLLNWEPIQIKVPQPPPDPATGQQANNPGYCFLTFSTPAQASTVFAQVNN 60
Query: 146 T------PMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA-- 196
+ MPN + F L+WA + + +++IFVGDLA + ++ L FR
Sbjct: 61 SGKGGTMTMPNSSKPFVLSWAPAITPNNSQQYQKEYSIFVGDLAPETSNSDLVAVFRNPV 120
Query: 197 ------RYP-------STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
R P S K AK+++D LTG ++GYGFVRF DE++Q RA+ EM+G++C +
Sbjct: 121 LGLRNDREPKFIRPFLSCKSAKIMLDPLTGVSRGYGFVRFSDEADQQRALIEMHGLYCLS 180
Query: 244 RPMRIGPATNK-KTVSGQQ---------QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSI 293
RPMRI PAT K K SG P + N V + +DP NTTVFVG L +
Sbjct: 181 RPMRISPATAKFKPASGVSLDYSQAPPFSAPLPNVDNQPVTLTSNDPYNTTVFVGGLSPL 240
Query: 294 VTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353
+++E LR F+ +G + +VK+P GK CGFVQF ++ AE A+ + G +GG IRLSWG
Sbjct: 241 ISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKMQGFPIGGSRIRLSWG 300
Query: 354 RS 355
RS
Sbjct: 301 RS 302
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K GF++F+ +A AER ++
Sbjct: 231 TVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHC------GFVQFVRKADAERAIEK 284
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 285 MQGFPI--GGSRIRLSW 299
>gi|302841234|ref|XP_002952162.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
gi|300262427|gb|EFJ46633.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
Length = 193
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 127/191 (66%), Gaps = 8/191 (4%)
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
D ++FVGDL +V D+ L+ FR +PS + AKV+ D +TGR+KGYGFVRFG E+E+ RA
Sbjct: 3 DFSLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMTDPVTGRSKGYGFVRFGSEAERDRA 62
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSG--------QQQYPKASYQNSQVAQSDDDPNNTT 284
+ EMNGVF S+RP+R+ AT ++ G + A + DPNNTT
Sbjct: 63 VVEMNGVFISSRPVRVSVATARRIDGGPLVPGGGSRVPGSGPGGGGGGGALGEADPNNTT 122
Query: 285 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 344
+F+G L S VT++ LR +F +YG++++ KIP GK CGFVQF DR AE A++ +NG +G
Sbjct: 123 LFIGGLSSGVTEDQLRGVFGRYGEIIYTKIPPGKGCGFVQFIDRQAAEYAMQEVNGQIIG 182
Query: 345 GQNIRLSWGRS 355
G ++R+SWG+S
Sbjct: 183 GSSVRISWGKS 193
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 83 TLWIGDLQYWMDETYLNTCFA-HTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+L++GDL + + +L + F + V + KV+ + TG+ +GYGF+ F S A +R +
Sbjct: 5 SLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMTDPVTGRSKGYGFVRFGSEAERDRAVV 64
Query: 142 TFNGTPMPNGEQNFRLNWASF----------GAGEK----------------RDDTPDHT 175
NG + + + R++ A+ G G + D + T
Sbjct: 65 EMNGVFISS--RPVRVSVATARRIDGGPLVPGGGSRVPGSGPGGGGGGGALGEADPNNTT 122
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+F+G L++ VT+ L+ F RY +++ ++ KG GFV+F D AM E
Sbjct: 123 LFIGGLSSGVTEDQLRGVF-GRY-----GEIIYTKIP-PGKGCGFVQFIDRQAAEYAMQE 175
Query: 236 MNGVFCSTRPMRI 248
+NG +RI
Sbjct: 176 VNGQIIGGSSVRI 188
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TL+IG L + E L F GE++ K+ K G GF++FI R AE +Q
Sbjct: 122 TLFIGGLSSGVTEDQLRGVFGRYGEIIYTKIPPGK------GCGFVQFIDRQAAEYAMQE 175
Query: 143 FNGTPMPNGEQNFRLNWA 160
NG + G + R++W
Sbjct: 176 VNGQII--GGSSVRISWG 191
>gi|403214377|emb|CCK68878.1| hypothetical protein KNAG_0B04440 [Kazachstania naganishii CBS
8797]
Length = 397
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 169/319 (52%), Gaps = 41/319 (12%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGE-VVAVKVI-------RNKQTGQIEGYGFIEFISRAG 135
L++GDL+ DE + ++ GE ++VK++ N+ + +GY FI+F +
Sbjct: 56 LYMGDLEPSWDENVIKRIWSSIGEDNISVKMMWQNNNYMGNESGPRNQGYCFIDFPTHFN 115
Query: 136 AERVLQTFNGTPMPNG-EQNFRLNWASFGA----GEKRDDTPDHTIFVGDLAADVTDYML 190
A L N +P + +LNWAS A G + +IFVGDLA +VT+ L
Sbjct: 116 ASNALLK-NKMSIPGHPHKKLKLNWASSSAPSTAGVSTTGGNNFSIFVGDLAPNVTEAQL 174
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F +RYPST+ AKVVID TG +KGYGF+RF D ++Q A+ EM GVF + R +++G
Sbjct: 175 FDLFISRYPSTEHAKVVIDLSTGVSKGYGFIRFRDPADQQTALAEMQGVFLNGRALKVGM 234
Query: 251 ATNKKT--VSGQQQYPKASYQNSQVAQSDD-------------------------DPNNT 283
++ + G +Q Y S+ A DPNNT
Sbjct: 235 SSGQSNSGAGGSRQVGHDRYGGSKPAGGKSNTPNSALFSQFMYPIQQQPALNHFTDPNNT 294
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQL 343
TVF+G L +V +E LR+ F +G++V+VKIP GK CGFVQ+ DR AE A+ + G +
Sbjct: 295 TVFIGGLSPLVKEEELRQYFQPFGEIVYVKIPVGKGCGFVQYIDRISAETAISQMQGFPI 354
Query: 344 GGQNIRLSWGRSPSNKQAQ 362
+RLSWGRS +Q Q
Sbjct: 355 SNSRVRLSWGRSAKQQQLQ 373
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T++IG L + E L F GE+V VK+ K G GF+++I R AE +
Sbjct: 295 TVFIGGLSPLVKEEELRQYFQPFGEIVYVKIPVGK------GCGFVQYIDRISAETAISQ 348
Query: 143 FNGTPMPNGEQNFRLNWA 160
G P+ N RL+W
Sbjct: 349 MQGFPISNSR--VRLSWG 364
>gi|366996152|ref|XP_003677839.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
gi|342303709|emb|CCC71491.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/311 (36%), Positives = 163/311 (52%), Gaps = 43/311 (13%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++GDL DE + + GE V VK++ N G +GY F+EF S L
Sbjct: 49 LYMGDLDPNWDENVIRQIWRDLGESNVHVKMMWNSNLGVNQGYCFVEFPSMEHGNNALLK 108
Query: 143 FNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG +P ++ +LNWAS GA + ++FVGDL+ +VT+ L E F RYPST
Sbjct: 109 -NGIVIPGFPQRRLKLNWASAGA---NGNNSGFSVFVGDLSPNVTEAQLFELFIGRYPST 164
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA-------TNK 254
AKVV D+LTG +K YGFV+F ++Q R + EM GVF + R +++G +N
Sbjct: 165 CHAKVVHDQLTGVSKCYGFVKFNSATDQQRVLVEMQGVFLNGRSIKVGLTGGAHNDNSNT 224
Query: 255 KTVSGQQQ----YPKASYQNSQVAQSDD--------------------------DPNNTT 284
+++G + P S S++ DPNNTT
Sbjct: 225 NSMAGGRSRFGGMPPNSASTVSSGNSNNRNMTPLLNSSQFMYPVQQQPTLNHLTDPNNTT 284
Query: 285 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 344
VF+G L S+V+++ LR+ F +G +++VKIP GK CGFVQ+ DR AE A+ + G L
Sbjct: 285 VFIGGLSSLVSEDDLRQYFQPFGDIIYVKIPTGKGCGFVQYVDRLSAELAISKMQGFPLA 344
Query: 345 GQNIRLSWGRS 355
IRLSWGRS
Sbjct: 345 NSRIRLSWGRS 355
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 26/195 (13%)
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
G G +T +++GDL + + ++++ +R S K++ + G +GY FV
Sbjct: 36 GGGATDYNTGSSQLYMGDLDPNWDENVIRQIWRDLGESNVHVKMMWNSNLGVNQGYCFVE 95
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNN 282
F A+ + NG+ P R + + AS A ++ + +
Sbjct: 96 FPSMEHGNNALLK-NGIVIPGFPQR------------RLKLNWAS------AGANGNNSG 136
Query: 283 TTVFVGNLDSIVTDEHLRELF------SQYGQLVHVKIPAGKRC-GFVQFADRSCAEEAL 335
+VFVG+L VT+ L ELF + + ++VH ++ +C GFV+F + + L
Sbjct: 137 FSVFVGDLSPNVTEAQLFELFIGRYPSTCHAKVVHDQLTGVSKCYGFVKFNSATDQQRVL 196
Query: 336 RMLNGTQLGGQNIRL 350
+ G L G++I++
Sbjct: 197 VEMQGVFLNGRSIKV 211
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T++IG L + E L F G+++ VK+ K G GF++++ R AE +
Sbjct: 284 TVFIGGLSSLVSEDDLRQYFQPFGDIIYVKIPTGK------GCGFVQYVDRLSAELAISK 337
Query: 143 FNGTPMPNGEQNFRLNWA 160
G P+ N RL+W
Sbjct: 338 MQGFPLANSR--IRLSWG 353
>gi|375152130|gb|AFA36523.1| nucleic acid binding protein, partial [Lolium perenne]
Length = 164
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 120/165 (72%), Gaps = 9/165 (5%)
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S KGAKV+ID TGR++GYGFVRF D++++ AMTEMNG++CSTRP+RIGPAT ++T
Sbjct: 2 SVKGAKVIIDANTGRSRGYGFVRFADDNDKSHAMTEMNGIYCSTRPIRIGPATPRRTGDS 61
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
P SD D N TV+VG LD V+++ LR+ F++YG + VKIP GK+
Sbjct: 62 GSSTP---------GHSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQ 112
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 364
CGFVQ+ +R+ A+EAL+ LNG+ +G Q +RLSWGRSPS+KQ++ D
Sbjct: 113 CGFVQYVNRTDAKEALQGLNGSVIGKQVVRLSWGRSPSHKQSRGD 157
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 66 AGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY 125
+G + P G RT+++G L + E L FA G+V +VK+ KQ
Sbjct: 61 SGSSTPGHSDGDSTN-RTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------ 113
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
GF+++++R A+ LQ NG+ + G+Q RL+W
Sbjct: 114 GFVQYVNRTDAKEALQGLNGSVI--GKQVVRLSWG 146
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 14/149 (9%)
Query: 107 EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGT-----PMPNGEQNFRLNWAS 161
V KVI + TG+ GYGF+ F + NG P+ G R S
Sbjct: 2 SVKGAKVIIDANTGRSRGYGFVRFADDNDKSHAMTEMNGIYCSTRPIRIGPATPRRTGDS 61
Query: 162 FGA--GEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
+ G D+ + T++VG L +V++ L++ F A+Y K+ + K G
Sbjct: 62 GSSTPGHSDGDSTNRTVYVGGLDPNVSEDELRKAF-AKYGDVASVKIPL------GKQCG 114
Query: 220 FVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
FV++ + ++ A+ +NG + +R+
Sbjct: 115 FVQYVNRTDAKEALQGLNGSVIGKQVVRL 143
>gi|367014399|ref|XP_003681699.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
gi|359749360|emb|CCE92488.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
Length = 472
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 168/303 (55%), Gaps = 34/303 (11%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIE---GYGFIEFISRAGAERV 139
L++GDL DE + + + GE V +K++ N + + GY F++F SR+ A
Sbjct: 50 LYMGDLDPSWDENVIRSIWNSLGESNVEIKLMWNNRNAGVRTHLGYCFVQFSSRSQASNA 109
Query: 140 LQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARY 198
L NG +P + RLNW+S +G D + + ++FVGDLA +VT+ L E F ++
Sbjct: 110 LLK-NGMAIPGYPSKTLRLNWSS-ASGNSADGSNEISVFVGDLAPNVTESDLFELFISKC 167
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---- 254
PST AKV+ D++TG +KGY FVRFG++ +Q RA+ EM G F R +R+G A ++
Sbjct: 168 PSTSNAKVMYDQVTGVSKGYAFVRFGNQEDQQRALQEMTGTFLKGRAIRVGSAGHQNQRN 227
Query: 255 ----------KTVSGQQQYPK-ASYQNSQVAQ------------SDDDPNNTTVFVGNLD 291
K ++ PK A+ ++ +Q S D NNTT+FV +L
Sbjct: 228 RNGPGLENKLKGLNATVSSPKPANISSTNFSQFILPTQQLPPLNSFTDRNNTTLFVSSLS 287
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
+VT+ L+ F +G +++ K+P K+CGFVQ+ DR+ AE A+ L G + G I++S
Sbjct: 288 HMVTENELKAFFQPFGNVIYAKLPENKQCGFVQYVDRASAEMAILKLQGFPIRGSRIKIS 347
Query: 352 WGR 354
WGR
Sbjct: 348 WGR 350
>gi|190346145|gb|EDK38159.2| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 178/356 (50%), Gaps = 79/356 (22%)
Query: 82 RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIRNKQT--------GQIEGYGFIEFIS 132
RTLW+GDL W+DE + + + G+ V +K+I+ K GY F+EF S
Sbjct: 53 RTLWMGDLDPWLDEAAIADLWYQLLGKKVTIKIIKPKNVRGSMSSSGLSHSGYCFVEFES 112
Query: 133 RAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRDDT--PDHT 175
A++ L + NG +P N ++ FRLNWAS GA P+++
Sbjct: 113 YEDAQQAL-SLNGQLLPDIAMPSQQSFPNNPDNQKKYFRLNWAS-GATLTAPIVQGPEYS 170
Query: 176 IFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+FVGDL+A T+ L F+ +P S K +V+ D +TG+++ +GFVRF DESE+ RA+
Sbjct: 171 LFVGDLSASTTEAHLLAFFQKSFPNSIKTVRVMTDPVTGKSRCFGFVRFTDESERQRALV 230
Query: 235 EMNGVFCSTRPMRIGPAT---NKKTVSGQQQYP------------------KASYQN-SQ 272
EMNG + RP+R+ AT + K Q YP Y N
Sbjct: 231 EMNGAWFGGRPLRVALATPRSSGKRFGFQNMYPFWGGGAPYYPYGYAGAPGSPDYGNMGG 290
Query: 273 VAQSDD---------------------------DPNNTTVFVGNLDSIVTDEHLRELFSQ 305
+ + DD DPNNTTVFVG L S V ++ L LF Q
Sbjct: 291 LNEEDDYGGAPPPPPPPPPPGQIPYPPPVQQYTDPNNTTVFVGGLSSDVNEQTLFTLFKQ 350
Query: 306 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQ 360
+G + +KIP GK CGFV++ +R AEEA+ + G +GG +RLSWGR S SNK+
Sbjct: 351 FGIIQQIKIPPGKNCGFVKYTNREDAEEAIASMQGFIIGGNRVRLSWGRVSASNKK 406
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 19/129 (14%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQY--GQLVHVKI----PAGK-RC-GFVQFADRSCAEEAL 335
++FVG+L + T+ HL F + + V++ GK RC GFV+F D S + AL
Sbjct: 170 SLFVGDLSASTTEAHLLAFFQKSFPNSIKTVRVMTDPVTGKSRCFGFVRFTDESERQRAL 229
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY 395
+NG GG+ +R++ S+ + N + ++G Y YGYA A
Sbjct: 230 VEMNGAWFGGRPLRVALATPRSSGKRFGFQNMYP--FWGGGAPYYPYGYAGAP------- 280
Query: 396 YGGYPGYGN 404
G P YGN
Sbjct: 281 --GSPDYGN 287
>gi|410079368|ref|XP_003957265.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
gi|372463850|emb|CCF58130.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
Length = 406
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/297 (38%), Positives = 160/297 (53%), Gaps = 37/297 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++GDL DE ++ +A GE V+VK++ Y FI F+ A L
Sbjct: 33 VLYMGDLDLSWDERVVSQIWASLGEPNVSVKMMNR--------YCFITFLDSLTASNALL 84
Query: 142 TFNGTPMPN-GEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG +P G + +LNWA + + ++IFVGDL+ +VT+ L + F +Y S
Sbjct: 85 K-NGMLIPGYGGKRLKLNWAQ----ASSNASNGYSIFVGDLSPNVTEAQLFDLFINKYAS 139
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
T AK+V D+ TG ++GYGFVRF +Q A+ EM G+F + R ++IG NK+
Sbjct: 140 TDHAKIVYDQATGVSRGYGFVRFNSLMDQQHALLEMQGIFLNGRAIKIGMTGNKQGQLQG 199
Query: 261 QQYPKASYQNSQV-AQSDD---------------------DPNNTTVFVGNLDSIVTDEH 298
QQ+ Q+ +V QS+ DPNNTTVFVG L S+VT++
Sbjct: 200 QQHQGQQQQDFKVPIQSNTPMNQSQFMYPVQQQPTLNHFTDPNNTTVFVGGLSSLVTEDE 259
Query: 299 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
LRE F +G +V+VKIP GK CGFVQ+ DR AE A+ + G + IRLSWGRS
Sbjct: 260 LREYFKPFGTIVYVKIPVGKGCGFVQYIDRVSAENAISKMQGFPIANSRIRLSWGRS 316
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 163/292 (55%), Gaps = 7/292 (2%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
V+ P + G + L++G+L ++ + L F+ G+V +K+I++K TG GYGF
Sbjct: 8 VSQNPARLGSGDAAKALYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTGLSAGYGF 67
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTD 187
++F+ A+ LQ+ NG + Q R+NWA F ++ D IFVGDLA+D+ D
Sbjct: 68 VQFLDHRAADMALQSLNGRVLHG--QELRVNWA-FQKDQREDSASQFQIFVGDLASDIND 124
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
+L E F++ A+V+ D TGR+KGYGFV F ++ +A+++M+G +R +R
Sbjct: 125 KLLCEAFQS--CGCADARVMWDHNTGRSKGYGFVSFKTRADAEQALSQMSGTMLGSRRIR 182
Query: 248 IGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 307
G A +K+ S Q A + S ++++ DP N V+VGNL V+D L+ SQ+G
Sbjct: 183 CGWAQHKQENS--QASFAAVDRVSTLSRAQADPENANVYVGNLAPDVSDAELQTAVSQFG 240
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
++ VKI F QFA + A A+ L+G LGG+ ++ SWGR + K
Sbjct: 241 AVLDVKIYRKGGYAFAQFASHADAVRAIVGLSGQNLGGKALKCSWGRHQARK 292
>gi|146421272|ref|XP_001486586.1| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 176/356 (49%), Gaps = 79/356 (22%)
Query: 82 RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIRNKQT--------GQIEGYGFIEFIS 132
RTLW+GDL W+DE + + + G+ V +K+I+ K GY F+EF S
Sbjct: 53 RTLWMGDLDPWLDEAAIADLWYQLLGKKVTIKIIKPKNVRGSMSSSGLSHSGYCFVEFES 112
Query: 133 RAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRDDT--PDHT 175
A++ L + NG +P N ++ FRLNWAS GA P+++
Sbjct: 113 YEDAQQAL-SLNGQLLPDIAMPSQQLFPNNPDNQKKYFRLNWAS-GATLTAPIVQGPEYS 170
Query: 176 IFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+FVGDL+A T+ L F+ +P S K +V+ D +TG+ + +GFVRF DESE+ RA+
Sbjct: 171 LFVGDLSASTTEAHLLAFFQKSFPNSIKTVRVMTDPVTGKLRCFGFVRFTDESERQRALV 230
Query: 235 EMNGVFCSTRPMRIGPAT---NKKTVSGQQQYP------------------KASYQN-SQ 272
EMNG + RP+R+ AT + K Q YP Y N
Sbjct: 231 EMNGAWFGGRPLRVALATPRSSGKRFGFQNMYPFWGGGAPYYPYGYAGAPGLPDYGNMGG 290
Query: 273 VAQSDD---------------------------DPNNTTVFVGNLDSIVTDEHLRELFSQ 305
+ + DD DPNNTTVFVG L S V ++ L LF Q
Sbjct: 291 LNEEDDYGGAPPPPPPPPPPGQIPYPPPVQQYTDPNNTTVFVGGLSSDVNEQTLFTLFKQ 350
Query: 306 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS-PSNKQ 360
+G + +KIP GK CGFV++ +R AEEA+ + G +GG +RLSWGR SNK+
Sbjct: 351 FGIIQQIKIPPGKNCGFVKYTNREDAEEAIASMQGFIIGGNRVRLSWGRVLASNKK 406
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 19/129 (14%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQY--GQLVHVKI----PAGK-RC-GFVQFADRSCAEEAL 335
++FVG+L + T+ HL F + + V++ GK RC GFV+F D S + AL
Sbjct: 170 SLFVGDLSASTTEAHLLAFFQKSFPNSIKTVRVMTDPVTGKLRCFGFVRFTDESERQRAL 229
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY 395
+NG GG+ +R++ S+ + N + ++G Y YGYA A
Sbjct: 230 VEMNGAWFGGRPLRVALATPRSSGKRFGFQNMYP--FWGGGAPYYPYGYAGAP------- 280
Query: 396 YGGYPGYGN 404
G P YGN
Sbjct: 281 --GLPDYGN 287
>gi|50288915|ref|XP_446887.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526196|emb|CAG59820.1| unnamed protein product [Candida glabrata]
Length = 555
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 117/316 (37%), Positives = 165/316 (52%), Gaps = 46/316 (14%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTG---QIEGYGFIEFISRAGAERV 139
L++GDL DE + +A GE + V+++ + GY F+EF S A A
Sbjct: 86 LYMGDLDPSWDEAVVKGIWAALGEENIGVRMMWGGDADFHRKNLGYCFVEFPSPAHASNA 145
Query: 140 LQTFNGTPMPN-GEQNFRLNW----------ASFGAGEKRDDTPDHTIFVGDLAADVTDY 188
L NG +P + +LNW AS G + +++IFVGDLA VT+
Sbjct: 146 LMK-NGMEIPGFVHKKLKLNWSAQSVNNGSGASVANGAVANQQTNNSIFVGDLAPSVTEA 204
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
L + F +YPST AKV+ D+LTG +KGYGFV+F +Q RA+ EM G F + R ++I
Sbjct: 205 QLFDLFINKYPSTVHAKVMYDQLTGISKGYGFVKFKSSMDQQRALVEMQGCFLNGRAIKI 264
Query: 249 GPATN---------------------------KKTVSGQ--QQYPKASYQNSQVAQSDDD 279
G A ++++GQ QQ+ A+ Q V D
Sbjct: 265 GIAGGNNNNNSNSNYNNQRMANDNISNGLGQQSRSLNGQLPQQFVNATPQ-QPVLNHFTD 323
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 339
PNNTTVFVG L +VT++ LR F +G +++VKIPAGK CGFVQ+ +RS AE A+ +
Sbjct: 324 PNNTTVFVGGLSPLVTEDELRSYFEPFGTIIYVKIPAGKGCGFVQYVERSSAETAITKMQ 383
Query: 340 GTQLGGQNIRLSWGRS 355
G + +RLSWGRS
Sbjct: 384 GFPIANSRVRLSWGRS 399
>gi|151944033|gb|EDN62326.1| RNA-binding protein [Saccharomyces cerevisiae YJM789]
Length = 523
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 169/331 (51%), Gaps = 60/331 (18%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLAA+V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAANV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPATN-KKTVSGQQQYPKAS----------------------------YQNSQVAQ- 275
+++GP + ++ VSG Y ++S ++ + ++Q
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 276 -----------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|323450795|gb|EGB06674.1| hypothetical protein AURANDRAFT_28594, partial [Aureococcus
anophagefferens]
Length = 319
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 159/305 (52%), Gaps = 29/305 (9%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
G ++++LW+G++Q E Y+ + +A + VK++R++ TG GYGF+EF S A
Sbjct: 17 GTLDDVKSLWVGEVQPDWTEEYMRSIYAECNKRFNVKIMRDRATGTAAGYGFLEFESHAD 76
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWAS---FGAGEKRDDTP------------------DH 174
A VL+ + P+P L W A + + TP D
Sbjct: 77 AAEVLRLYEDKPIPGTPFKCVLRWGGGHGTAAAKPKGGTPYGAGTMHPVGYSGPPPQADW 136
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+IFVGDL VT+ L F +Y S K+VID TG +KG+GF++FG E+E+ AM
Sbjct: 137 SIFVGDLDYTVTEQQLHGAFAKKYRSILSTKLVIDMSTGLSKGFGFIKFGSEAERDSAMN 196
Query: 235 EMNGVFCSTRPMRIGPATNKK------TVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
EM+G + R +R AT ++ ++ QQQ S ++ ++ ++ NT VFVG
Sbjct: 197 EMHGQYVGERAIRCTLATTREEREREAKMNQQQQMYDPSRLHA--PKATEEGENTCVFVG 254
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
LD V+ + LR F G + +++IP G+ CGFV F R AE A+ L G ++ G +
Sbjct: 255 GLDESVSPDMLRHHFGLLGDIAYIRIPPGRGCGFVGFVHRKNAEAAISTLQGLRINGYKV 314
Query: 349 RLSWG 353
RLSWG
Sbjct: 315 RLSWG 319
>gi|254577373|ref|XP_002494673.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
gi|238937562|emb|CAR25740.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
Length = 558
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 166/337 (49%), Gaps = 51/337 (15%)
Query: 67 GVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE--VVAVKVIRNKQTGQIE- 123
G P G G L++GDL DE + + GE VV ++ N +G
Sbjct: 32 GTGSPVNAVGNRGS--QLYMGDLDPSWDENTIRQIWGSLGESNVVIRLMLHNNVSGSGTM 89
Query: 124 ------GYGFIEFISRAGAERVLQTFNGTPMPN-GEQNFRLNWASFGAGEKRDDTPDHTI 176
GY F+EF S A L NG +PN + +LNWAS + ++++
Sbjct: 90 GPRNNLGYCFLEFPSTVHASNALLK-NGMQIPNFVHKRLKLNWAS-SSHSSAGAFNEYSV 147
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
FVGDLA +VT+ L E F +R+ ST K+V D+LTG +KGY FV+F + + Q RA+ EM
Sbjct: 148 FVGDLAPNVTESQLFELFISRFNSTSHVKIVYDQLTGVSKGYAFVKFTNPAHQQRALLEM 207
Query: 237 NGVFCSTRPMRIGPA-------------------------------TNKKTVSGQQ-QYP 264
G+F S R +R+ A N +SG Q YP
Sbjct: 208 QGIFLSGRAIRVSNAGHLQNSADGKSKATGAASASNANAVGGINTGNNSGLMSGSQFMYP 267
Query: 265 KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
Q S DPNNTTVFVG L S+V ++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 268 ---VQPQPALNSFTDPNNTTVFVGGLSSLVAEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 324
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
+ DR AE A+ + G +G +RLSWGRS KQA
Sbjct: 325 YVDRISAETAIAKMQGFPIGNSRVRLSWGRSA--KQA 359
>gi|323337302|gb|EGA78555.1| Nam8p [Saccharomyces cerevisiae Vin13]
Length = 523
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 168/331 (50%), Gaps = 60/331 (18%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPATN-KKTVSGQQQYPKAS----------------------------YQNSQVAQ- 275
+++GP + ++ VSG Y ++S ++ + ++Q
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNXMGFKRNHMSQF 294
Query: 276 -----------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKXCGFVQ 354
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|365765198|gb|EHN06710.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 523
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 168/331 (50%), Gaps = 60/331 (18%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQI----------EGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNXSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPATN-KKTVSGQQQYPKAS----------------------------YQNSQVAQ- 275
+++GP + ++ VSG Y ++S ++ + ++Q
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNTMGFKRNHMSQF 294
Query: 276 -----------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|256269427|gb|EEU04722.1| Nam8p [Saccharomyces cerevisiae JAY291]
Length = 523
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 166/331 (50%), Gaps = 60/331 (18%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPATN-KKTVSGQQQYPKASY-----------------------QNSQVAQSD---- 277
+++GP + ++ VSG Y ++S N ++D
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMDFKRNDMSQF 294
Query: 278 -------------DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|349578638|dbj|GAA23803.1| K7_Nam8p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298893|gb|EIW09988.1| Nam8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 523
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 168/331 (50%), Gaps = 60/331 (18%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPATN-KKTVSGQQQYPKAS----------------------------YQNSQVAQ- 275
+++GP + ++ VSG Y ++S ++ + ++Q
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMDFKRNHMSQF 294
Query: 276 -----------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|259146840|emb|CAY80096.1| Nam8p [Saccharomyces cerevisiae EC1118]
gi|323348251|gb|EGA82500.1| Nam8p [Saccharomyces cerevisiae Lalvin QA23]
Length = 523
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 168/331 (50%), Gaps = 60/331 (18%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPATN-KKTVSGQQQYPKAS----------------------------YQNSQVAQ- 275
+++GP + ++ VSG Y ++S ++ + ++Q
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNTMGFKRNHMSQF 294
Query: 276 -----------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|6321878|ref|NP_011954.1| Nam8p [Saccharomyces cerevisiae S288c]
gi|730108|sp|Q00539.2|NAM8_YEAST RecName: Full=Protein NAM8
gi|487934|gb|AAB68928.1| Nam8p: Putative RNA binding proteins [Saccharomyces cerevisiae]
gi|520596|dbj|BAA02016.1| Mre2 protein [Saccharomyces cerevisiae]
gi|190405867|gb|EDV09134.1| RNA-binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207344656|gb|EDZ71726.1| YHR086Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|285809994|tpg|DAA06781.1| TPA: Nam8p [Saccharomyces cerevisiae S288c]
gi|323333247|gb|EGA74645.1| Nam8p [Saccharomyces cerevisiae AWRI796]
Length = 523
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 168/331 (50%), Gaps = 60/331 (18%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPATN-KKTVSGQQQYPKAS----------------------------YQNSQVAQ- 275
+++GP + ++ VSG Y ++S ++ + ++Q
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 276 -----------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQ 354
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|323304584|gb|EGA58347.1| Nam8p [Saccharomyces cerevisiae FostersB]
Length = 523
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 168/331 (50%), Gaps = 60/331 (18%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPATN-KKTVSGQQQYPKAS----------------------------YQNSQVAQ- 275
+++GP + ++ VSG Y ++S ++ + ++Q
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 276 -----------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|365984507|ref|XP_003669086.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
gi|343767854|emb|CCD23843.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
Length = 498
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 168/328 (51%), Gaps = 57/328 (17%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++G+L E + + + GE ++ VK+I NK G +GY FIEF S A L
Sbjct: 72 IYMGELDPTWTEATIKSIWKSLGEELINVKLIWNKNLGLNQGYCFIEFPSEQHASNALLK 131
Query: 143 FNGTPMPNG-EQNFRLNWASF---------GAGEKRDDTPDHTIFVGDLAADVTDYMLQE 192
NG +P + +LNW S +G+ + ++++FVGDLAA+VT+ L +
Sbjct: 132 -NGINIPEFPRKKVKLNWTSSSSASLQGSSNSGQVPSTSTNYSVFVGDLAANVTEGQLFD 190
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP-- 250
F +R+ ST AK+V D +T +K YGFV+F D +Q RA+ EM G+F + R ++IG
Sbjct: 191 LFISRFQSTCHAKIVHDPVTRASKCYGFVKFNDLRDQQRALVEMQGIFLNGRAIKIGTTT 250
Query: 251 -------------ATNKKTVSGQQQY-----------------PKASYQNSQVA------ 274
A N G+ ++ ++Y+ + ++
Sbjct: 251 GGSAHTNTDNNALAPNIANSGGKSRFQGTTTNSPSSPANIGRGNTSNYRLTSLSSQFIFP 310
Query: 275 -------QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD 327
DPNNTTVFVG L S+VT+E LR F +G +++VKIP GK CGFVQ+ D
Sbjct: 311 VQQQPPLNHFTDPNNTTVFVGGLSSMVTEEQLRHCFQPFGTIIYVKIPIGKGCGFVQYFD 370
Query: 328 RSCAEEALRMLNGTQLGGQNIRLSWGRS 355
R AE A+ + G +G IRLSWGRS
Sbjct: 371 RISAETAILRMQGFPIGNSRIRLSWGRS 398
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L CF G ++ VK+ K G GF+++ R AE +
Sbjct: 327 TVFVGGLSSMVTEEQLRHCFQPFGTIIYVKIPIGK------GCGFVQYFDRISAETAILR 380
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 381 MQGFPI--GNSRIRLSW 395
>gi|323308830|gb|EGA62067.1| Nam8p [Saccharomyces cerevisiae FostersO]
Length = 466
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 166/329 (50%), Gaps = 60/329 (18%)
Query: 86 IGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFISRA 134
+GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 1 MGDLDPTWDKNTVRXIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPSST 60
Query: 135 GAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADVTD 187
A L NG +PN + +LNWA+ + + +IFVGDLA +VT+
Sbjct: 61 HAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVTE 119
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R ++
Sbjct: 120 SQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAIK 179
Query: 248 IGPATN-KKTVSGQQQYPKAS----------------------------YQNSQVAQ--- 275
+GP + ++ VSG Y ++S ++ + ++Q
Sbjct: 180 VGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMXFKRNHMSQFIY 239
Query: 276 ---------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 326
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ+
Sbjct: 240 PVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYV 299
Query: 327 DRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
DR AE A+ + G + +RLSWGRS
Sbjct: 300 DRLSAEAAIAGMQGFPIANSRVRLSWGRS 328
>gi|302656875|ref|XP_003020176.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
gi|291183977|gb|EFE39558.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
Length = 281
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 124/225 (55%), Gaps = 32/225 (14%)
Query: 167 KRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDE 226
+ + P+ +IFVGDL +V +Y+L F++R+PS K AK++ D +TG ++GYGFVRF DE
Sbjct: 21 REERGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDE 80
Query: 227 SEQLRAMTEMNGVFCSTRPMRIGPATNKK------------------------------T 256
++Q RA++EM GV+C RPMRI AT K
Sbjct: 81 TDQQRALSEMQGVYCGNRPMRISTATPKNKGPAGPGGPAHMGVPGGPPGGMYPPSMGGAG 140
Query: 257 VSGQQQYPKASYQNS--QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
P+ Y + Q DPNNTTVFVG L VT++ LR F +G++ +VKI
Sbjct: 141 GPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKI 200
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
P GK CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 201 PPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 245
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L ++ E L + F GE+ VK+ K G GF++F+ R AE +
Sbjct: 170 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQ 223
Query: 143 FNGTPMPNGEQNFRLNWA 160
G P+ G RL+W
Sbjct: 224 MQGYPI--GNSRVRLSWG 239
>gi|401625439|gb|EJS43448.1| nam8p [Saccharomyces arboricola H-6]
Length = 527
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 168/335 (50%), Gaps = 64/335 (19%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D++ + +A GE + V+++ N + +GY F++F S
Sbjct: 56 LYMGDLDPTWDKSTIRQIWASLGEANINVRMMWNNPSNNGPRSPLGQKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP----------DHTIFVGDL 181
A L NG +PN + +LNWA+ + + +++IFVGDL
Sbjct: 116 STHAANALLK-NGMLIPNFPNRKLKLNWATSSYSNNSNTSNTVNNTAKSGNNYSIFVGDL 174
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
A +VT+ L E F RY S AK+V D++TG +KGYGFV+F + EQ A++EM GVF
Sbjct: 175 APNVTESQLFELFINRYASASHAKIVHDQVTGMSKGYGFVKFNNADEQHLALSEMQGVFL 234
Query: 242 STRPMRIGPATNKK--------------TVSGQQQYPKASYQNSQVAQSD---------- 277
+ R +++GP ++ +++ + P+ S +N + +
Sbjct: 235 NGRAIKVGPTAGQQQQNMHANGNSRSFSSLNNENMDPRFSSKNQSLLGNVANKMSLKRNY 294
Query: 278 -----------------DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 320
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK C
Sbjct: 295 TSQFIYPVQQQPSLTHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGC 354
Query: 321 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
GFVQ+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 GFVQYVDRLSAEAAISGMQGFPIANSRVRLSWGRS 389
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T++IG L + E L F G +V VK+ K G GF++++ R AE +
Sbjct: 318 TVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGK------GCGFVQYVDRLSAEAAISG 371
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ N RL+W
Sbjct: 372 MQGFPIANSR--VRLSW 386
>gi|426192598|gb|EKV42534.1| hypothetical protein AGABI2DRAFT_229063, partial [Agaricus bisporus
var. bisporus H97]
Length = 396
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 168/334 (50%), Gaps = 73/334 (21%)
Query: 93 MDETYLN-TCFAHTGEVVAVKVIR---NKQTGQIE---GYGFIEFISRAGAERVLQTFNG 145
MDE Y C E + +KV + + TGQ GY F+ F + A A VL N
Sbjct: 1 MDEEYAKQVCKLLNWEPIQIKVPQPPPDPATGQQANNPGYCFLTFSTPAQASTVLAQVNN 60
Query: 146 T------PMPNGEQNFRLNWASFGAGEKRDDTP----DHTIFVGDLAADVTDYMLQETFR 195
+ MPN + F L+WA A TP +++IFVGDLA + ++ L FR
Sbjct: 61 SGKGGTMTMPNSSKPFVLSWAP--AVTPSISTPQYQKEYSIFVGDLAPETSNSDLVAVFR 118
Query: 196 A--------RYP-------STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
R P S K AK+++D LTG ++GYGFVRF DE++Q RA+ EM+G++
Sbjct: 119 NPVLGLRNDREPKFIRPFLSCKSAKIMLDPLTGVSRGYGFVRFSDEADQQRALIEMHGLY 178
Query: 241 CSTRPMRIGPATNK----------------------KTVSGQQQ---YPKASYQNSQVAQ 275
C +RPMRI PAT K + V GQ + S ++ A+
Sbjct: 179 CLSRPMRISPATAKFKPASGVGNGLGVSGLLSEAQLRQVFGQTDGYLMTEESLKHHAHAR 238
Query: 276 --------------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 321
+ +DP NTTVFVG L ++++E LR F+ +G + +VK+P GK CG
Sbjct: 239 AILGNLMGPNGEQLTSNDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCG 298
Query: 322 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
FVQF ++ AE A+ + G +GG IRLSWGRS
Sbjct: 299 FVQFVRKADAERAIEKMQGFPIGGSRIRLSWGRS 332
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K G F++F+ +A AER ++
Sbjct: 261 TVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCG------FVQFVRKADAERAIEK 314
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 315 MQGFPI--GGSRIRLSW 329
>gi|4026|emb|CAA46011.1| NAM8 [Saccharomyces cerevisiae]
gi|228931|prf||1814447B NAM8 gene
Length = 523
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 166/331 (50%), Gaps = 60/331 (18%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGY V+F + EQ A++EM GVF + R
Sbjct: 175 TESQLLELFINRYASTSHAKIVHDQVTGMSKGYVLVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPATN-KKTVSGQQQYPKAS----------------------------YQNSQVAQ- 275
+++GP + ++ VSG Y ++S ++ + ++Q
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 276 -----------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQ 354
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|414592073|tpg|DAA42644.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
gi|414592074|tpg|DAA42645.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
gi|414592075|tpg|DAA42646.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
Length = 207
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 107/170 (62%), Gaps = 20/170 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R+LWIG L WMDE YL CF + E++++ + RNKQTGQ EG+GF++F A +L+
Sbjct: 37 RSLWIGGLLPWMDEDYLYGCFTTSRELLSLVIKRNKQTGQSEGFGFLKFSDHTAAAHILK 96
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKR--------------------DDTPDHTIFVGDL 181
++NG MPN Q+F+LNWA+ K+ D + DH+IFVGDL
Sbjct: 97 SYNGQKMPNAVQDFKLNWATQQPAPKKLPDPDFKLDLATQQERHAAVDSSSDHSIFVGDL 156
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
A +VT YML F+ARYPS K AK++ D+ TG +K YGFV+FGD EQ++
Sbjct: 157 AYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVDEQIQ 206
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 206 VVIDR--LTGRTKGYGFVRFGDESEQLRAMTEMNG--VFCSTRPMRIGPATN----KKTV 257
+VI R TG+++G+GF++F D + + NG + + + ++ AT KK
Sbjct: 66 LVIKRNKQTGQSEGFGFLKFSDHTAAAHILKSYNGQKMPNAVQDFKLNWATQQPAPKKLP 125
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS------QYGQLVH 311
+ A+ Q A D ++ ++FVG+L VT L +F + +++
Sbjct: 126 DPDFKLDLATQQERHAAV--DSSSDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSAKIIF 183
Query: 312 VKIPAGKRC-GFVQFAD 327
K +C GFVQF D
Sbjct: 184 DKFTGLSKCYGFVQFGD 200
>gi|410081644|ref|XP_003958401.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
gi|372464989|emb|CCF59266.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
Length = 620
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 196/437 (44%), Gaps = 122/437 (27%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DE + + G+ V++K++R K+
Sbjct: 37 RTLWMGDLDPTFDELTIKEIWKRLGKNVSIKLVRAKKNLLIPCSSFTNNSGGNSKNETEE 96
Query: 119 --------------TGQIE--GYGFIEFISRAGAERVLQTFNGTPMPN------------ 150
T Q+ GY FIEF S A+ L + N P+PN
Sbjct: 97 SSITINGISFIDPMTTQLHHAGYCFIEFDSLKDAQFGL-SLNSKPIPNFKSISTELETNP 155
Query: 151 -GEQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVV 207
G++ FRLNWAS GA + TP++++FVGDL+ T+ L + F+ + S K +V+
Sbjct: 156 SGQRTFRLNWAS-GATLQSSIPTTPEYSLFVGDLSPMTTEADLLKLFQKTFKSVKTVRVM 214
Query: 208 IDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP--- 264
D +TG ++ +GF+R DE E+ A+ +MNG R +R+ A N + + Q+Q P
Sbjct: 215 TDPITGESRCFGFIRLSDEFEREEALDKMNGTLLHGRQLRVALA-NPRNANLQEQAPSQV 273
Query: 265 -------------------------KASYQN-----SQVAQSDDDPNNTTVFVGNLDSIV 294
K S N S SD+DP NTTVFVGNL+ +
Sbjct: 274 VEDKKKHNEPLLLETAKKLFSKELLKNSSSNVNDVKSNEDHSDNDPTNTTVFVGNLNCKI 333
Query: 295 TDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG- 353
T++ L+++F +G + VKIP GK+CGFV+F ++ AE ++ L G + G IR+SWG
Sbjct: 334 TEDELQKVFEPFGAIEKVKIPPGKKCGFVKFCNKIDAEASMYGLQGYFVAGSPIRISWGR 393
Query: 354 -------------RSPS-----NKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY 395
PS N+ +Q D + +N Y +EN + P P
Sbjct: 394 SRNSNSSGSANAINRPSESSFMNENSQSDSSTYNLKYNPVI--WENKVWTEEVPAVP--- 448
Query: 396 YGGYPGYGNYQQPQQPQ 412
NY+Q + PQ
Sbjct: 449 --------NYEQIRNPQ 457
>gi|294659018|ref|XP_461354.2| DEHA2F23276p [Debaryomyces hansenii CBS767]
gi|202953554|emb|CAG89760.2| DEHA2F23276p [Debaryomyces hansenii CBS767]
Length = 477
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 184/367 (50%), Gaps = 52/367 (14%)
Query: 18 AHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQ 77
++QYQ Q Q Q++P + + Y PP+ Q +A Q
Sbjct: 49 SNQYQSQVQ---QRKPYNRSNNYQANYPPRNNYQNSYDQGNHSAENQ------------- 92
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNK------QTGQIEGYGFIEF 130
LW+GDL DE + ++ GE VAVK+IR+K + GY F+ F
Sbjct: 93 ----NQLWMGDLDPSWDENAIKKIWSAFGETPVAVKIIRDKFAVDSTDSKSNAGYCFVSF 148
Query: 131 IS-RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAG----EKRDDTP------DHTIFVG 179
+ +A + VL+ NG +P + F+LNWAS G+G ++ + P D++IFVG
Sbjct: 149 ANQKAVSTAVLK--NGLQIPGSTKVFKLNWAS-GSGSTIPQENNFKPIGKTHNDYSIFVG 205
Query: 180 DLAADVTDYMLQETFRARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
DL +DVT+ ML E F YP+ K AK++ D +T +KG+GFVRF Q +A+ EMNG
Sbjct: 206 DLGSDVTEPMLFECFNKVYPNQVKQAKIMFDPVTKLSKGFGFVRFSTSFTQQKALNEMNG 265
Query: 239 VFCSTRPMRIGPAT-NKKTVSGQQQYPKASY---QNSQVAQ------SDDDPNNTTVFVG 288
+RP+R+G A + GQ + K+ N +AQ + DPNNTT+ +
Sbjct: 266 TIAGSRPIRVGMAAGSSNNAVGQDTFSKSETPVASNVHIAQPQPSLNAHTDPNNTTIIIK 325
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
L S +++ L F +G +V+ K+ + G +++ RS AE AL ++G+ +
Sbjct: 326 GLSSKFSEDELCSYFIAFGDIVYCKLSSDFNSGIIKYFLRSSAESALLFMHGSIANDCRV 385
Query: 349 RLSWGRS 355
++WG+S
Sbjct: 386 VVNWGKS 392
>gi|242045812|ref|XP_002460777.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
gi|241924154|gb|EER97298.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
Length = 171
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 103/131 (78%), Gaps = 3/131 (2%)
Query: 267 SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 326
+YQ+SQ S++DPNNTTVFVG LDS V +E+LR++F+ +G++ +VKIP GK CGFVQF
Sbjct: 1 AYQSSQGISSENDPNNTTVFVGGLDSNVNEEYLRQIFTPHGEISYVKIPVGKHCGFVQFT 60
Query: 327 DRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPN-QWNA-GYYGYA-QGYENYG 383
RSCAEEA++MLNG+Q+GGQ +RLSWGR+ + + +Q D N Q+N YYGY QGYE YG
Sbjct: 61 SRSCAEEAIQMLNGSQIGGQKVRLSWGRTQNRQASQQDANSQYNGNSYYGYRQQGYEGYG 120
Query: 384 YAAAAPQDPSM 394
YAA QDPSM
Sbjct: 121 YAAPNTQDPSM 131
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L ++E YL F GE+ VK+ K GF++F SR+ AE +Q
Sbjct: 18 TVFVGGLDSNVNEEYLRQIFTPHGEISYVKIPVGKHC------GFVQFTSRSCAEEAIQM 71
Query: 143 FNGTPMPNGEQNFRLNWA 160
NG+ + G Q RL+W
Sbjct: 72 LNGSQI--GGQKVRLSWG 87
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 169/339 (49%), Gaps = 28/339 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E ++ F G + K+I + G + Y F+EF+ + A LQ
Sbjct: 14 RTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMI--AEHGGNDPYCFVEFVEHSHAAAALQ 71
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + E ++NWA+ + K+D + H +FVGDL+++V L+ F A +
Sbjct: 72 TMNGRMILGKE--VKVNWATTPSSMKKDTSNHHHVFVGDLSSEVDTPDLKAAF-APFGQI 128
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D T ++KGYGFV F ++ + A+ MNG + S R +R AT K Q
Sbjct: 129 SDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQWLSGRAIRTNWATRKPPPPRQP 188
Query: 262 QYPK-ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 320
+ K SY + + NTTV++G + + +T+ +RE FS YG + V+I K
Sbjct: 189 ETTKQLSYDD---VCNSSSYTNTTVYIGGVTTGLTEGKMRETFSHYGHIQEVRIFPDKGY 245
Query: 321 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYE 380
F++F A A+ +NG+Q+ G ++ SWG+ S+ Q PN + GYY Y QG
Sbjct: 246 AFIRFMTHESAAHAIVSVNGSQINGHMVKCSWGKESSDPLYQAQPNTY-PGYYNYQQGQW 304
Query: 381 N------------------YGYAAAAPQDPSMYYGGYPG 401
N G AAA PQ S YY Y G
Sbjct: 305 NQYYQQYATQQPQVQPQQYMGGAAAVPQQSSYYYPQYQG 343
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 27/190 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
DD T++VG+L VT+ + + F P K K++ + G Y FV F + S
Sbjct: 9 DDALPRTLYVGNLDRQVTEAFILQLFGQIGP-CKSCKMIAEH--GGNDPYCFVEFVEHSH 65
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ MNG + +++ AT ++ D N+ VFVG
Sbjct: 66 AAAALQTMNGRMILGKEVKVNWATTPSSM------------------KKDTSNHHHVFVG 107
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L S V L+ F+ +GQ+ ++ K GFV F ++ AE A++ +NG
Sbjct: 108 DLSSEVDTPDLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQW 167
Query: 343 LGGQNIRLSW 352
L G+ IR +W
Sbjct: 168 LSGRAIRTNW 177
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK-----RCGFVQFADRSCA 331
DDD T++VGNLD VT+ + +LF Q G K+ A C FV+F + S A
Sbjct: 8 DDDALPRTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYC-FVEFVEHSHA 66
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSN 358
AL+ +NG + G+ ++++W +PS+
Sbjct: 67 AAALQTMNGRMILGKEVKVNWATTPSS 93
>gi|365760349|gb|EHN02076.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 513
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 166/338 (49%), Gaps = 72/338 (21%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + + GE V V+++ N + +GY FI+F S
Sbjct: 46 LYMGDLDPTWDKNTIRQIWTSLGEANVNVRMMWNNPSNNGSRPSVGPKNNQGYCFIDFPS 105
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASF-------GAGEKRDDTPDHTIFVGDLAAD 184
A L NG +PN + +LNWA+ GA K ++ ++IFVGDLA +
Sbjct: 106 STHAANALLK-NGMLIPNFPNRKLKLNWATSSYSNNINGANMKSGNS--YSIFVGDLAPN 162
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
VT+ L F RY S AK+V D++TG +KGYGFV+F + E+ A++EM GVF + R
Sbjct: 163 VTESQLFGLFINRYASASHAKIVHDQVTGMSKGYGFVKFTNAGEEQLALSEMQGVFLNGR 222
Query: 245 PMRIGPATNKK----TVSGQQQYPKASYQNSQVAQSDDDP-------------------- 280
+++GP + ++ V+G ++S S + + DP
Sbjct: 223 AIKVGPTSGQQQQNVHVNGNIDQGRSS---SSLNNENFDPRFHSKNQSLLGNVANNMSSK 279
Query: 281 -----------------------NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG 317
NNTTVF+G L S+VT++ LR F +G +V+VKIP G
Sbjct: 280 GNNVSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVG 339
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
K CGFVQ+ DR AE A+ + G + +RLSWGRS
Sbjct: 340 KGCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 377
>gi|156843736|ref|XP_001644934.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
gi|156115587|gb|EDO17076.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
Length = 587
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 165/337 (48%), Gaps = 72/337 (21%)
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPN-------------GEQNFRLNWASFGAGEKRDD 170
GY F+EF ++ A+ L + N P+PN G++NFRLNWAS GA +
Sbjct: 165 GYCFVEFQNQEDAQYAL-SLNSNPIPNILSDSNNLYTNPTGKRNFRLNWAS-GATLQSSI 222
Query: 171 --TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
TP+ ++FVGDL+ T+ L F+ +Y S K +V+ D +TG ++ +GF+RFGD+ E
Sbjct: 223 PVTPEFSLFVGDLSPTATEADLLSLFQQQYRSVKTVRVMTDPITGASRCFGFIRFGDQDE 282
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTV------------------------------- 257
+ RA++EMNGV+C RP+R+ AT +
Sbjct: 283 RKRALSEMNGVWCQGRPLRVAYATPRNNNNIISNQQNTATQLSHHGNSYHNNSHNNGNNR 342
Query: 258 SGQQQYPKASYQNSQVAQ---------SDDDPNN---TTVFVGNLDSIVTDEHLRELFSQ 305
S + +YQN+ A S + N +TVF+G L + + +R LF
Sbjct: 343 SRKNSSSILNYQNNYTANTNHGQPPQLSKSNSQNELVSTVFIGGLSPKINESQVRSLFKP 402
Query: 306 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS-------- 357
+G +V+VK+P GK CGFV+F +R AE A++ L G + G IRLSWG++ S
Sbjct: 403 FGNIVNVKLPPGKNCGFVKFENRIDAEAAIQGLQGFIVAGNPIRLSWGKASSMTSGNASN 462
Query: 358 ----NKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQ 390
N NQ N Y+ ++ + Y A + PQ
Sbjct: 463 NHNVNGNIDQLNNQNNVNYHVKSKPHFQYPMAKSVPQ 499
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 18/286 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTLW+GDL DE+ + + +V VK+IR K+ I I + +
Sbjct: 24 RTLWMGDLDPSFDESTIQQIWKSLDRLVTVKLIRAKKNLLIPCSSTINDSFSNSSNSLSP 83
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLA-ADVTDYMLQETF---RAR 197
T + T + + + S + E + ++ + + A +T + +T +
Sbjct: 84 TNSSTRLSSAGSSASPTTVSSSSAENKSNSITNNLSTDQTEDASITSNLDDDTNGGNQNL 143
Query: 198 YPSTKGAKVVIDRLTGRTK--GYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
+ ID T + GY FV F ++ + A++ + + P + + N
Sbjct: 144 HKININGVSFIDPSTVQLHHAGYCFVEFQNQEDAQYALS----LNSNPIPNILSDSNNLY 199
Query: 256 TVSGQQQYPKASYQNSQVAQSDDDPN-NTTVFVGNLDSIVTDEHLRELFSQ-YGQLVHVK 313
T ++ + ++ + QS ++FVG+L T+ L LF Q Y + V+
Sbjct: 200 TNPTGKRNFRLNWASGATLQSSIPVTPEFSLFVGDLSPTATEADLLSLFQQQYRSVKTVR 259
Query: 314 -----IPAGKRC-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353
I RC GF++F D+ + AL +NG G+ +R+++
Sbjct: 260 VMTDPITGASRCFGFIRFGDQDERKRALSEMNGVWCQGRPLRVAYA 305
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 153/278 (55%), Gaps = 10/278 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+++G+L + E ++ T F G V KVI + G + Y F+EF A + LQ
Sbjct: 74 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD---GTNDPYAFVEFADHYTAAQALQ 130
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
N + E+ ++NWA+ + + DT H +FVGDL+ +V + L++ F A +
Sbjct: 131 AMNKRVLL--EKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 187
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--KTVS 258
AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K T +
Sbjct: 188 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 247
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
G QY ++ V + P+NT+V+VGN++S DE LR F ++G+++ V+I +
Sbjct: 248 GDGQYGRSELNYDDV-YNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQ 306
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 356
FV+F + A A+ +NG +L GQNI+ SWGR+P
Sbjct: 307 GYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTP 344
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 269 QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGKRCGFVQF 325
QN+ +D TV+VGNLD +T++ + LF Q G + K+ FV+F
Sbjct: 60 QNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEF 119
Query: 326 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 367
AD A +AL+ +N L + ++++W P + QA+ D ++
Sbjct: 120 ADHYTAAQALQAMNKRVLLEKEMKVNWATEPGS-QAKVDTSK 160
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 156/285 (54%), Gaps = 12/285 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+++G+L + E ++ T F G V KVI + G + Y F+EF A + LQ
Sbjct: 74 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD---GTNDPYAFVEFADHYTAAQALQ 130
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
N + E+ ++NWA+ + + DT H +FVGDL+ +V + L++ F A +
Sbjct: 131 AMNKRVLL--EKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 187
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--KTVS 258
AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K T +
Sbjct: 188 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 247
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
G QY + V + P+NT+V+VGN++S DE LR F ++G+++ V+I +
Sbjct: 248 GDGQYGRTELNYDDV-YNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQ 306
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS--NKQA 361
FV+F + A A+ +NG +L GQNI+ SWGR+P N+QA
Sbjct: 307 GYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTPEGHNQQA 351
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 262 QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGK 318
+Y + QN+ +D TV+VGNLD +T++ + LF Q G + K+
Sbjct: 53 RYHFQAAQNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTND 112
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 367
FV+FAD A +AL+ +N L + ++++W P + QA+ D ++
Sbjct: 113 PYAFVEFADHYTAAQALQAMNKRVLLEKEMKVNWATEPGS-QAKVDTSK 160
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 157/285 (55%), Gaps = 12/285 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+++G+L + E ++ T F G V KVI + G + Y F+EF A + LQ
Sbjct: 93 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD---GTNDPYAFVEFADHYTAAQALQ 149
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
N + E+ ++NWA+ + + DT H +FVGDL+ +V + L++ F A +
Sbjct: 150 AMNKRVLL--EKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 206
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--KTVS 258
AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K T +
Sbjct: 207 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 266
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
G QY ++ V + P+NT+V+VGN++S DE LR F ++G+++ V+I +
Sbjct: 267 GDGQYGRSELNYDDV-YNQTGPDNTSVYVGNVNSNANDEDLRAAFDKFGRILEVRIFKSQ 325
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS--NKQA 361
FV+F + A A+ +NG +L GQNI+ SWGR+P N+QA
Sbjct: 326 GYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTPEGHNQQA 370
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 262 QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGK 318
+Y + QN+ +D TV+VGNLD +T++ + LF Q G + K+
Sbjct: 72 RYHFQAAQNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTND 131
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 367
FV+FAD A +AL+ +N L + ++++W P + QA+ D ++
Sbjct: 132 PYAFVEFADHYTAAQALQAMNKRVLLEKEMKVNWATEPGS-QAKVDTSK 179
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 156/285 (54%), Gaps = 12/285 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+++G+L + E ++ T F G V KVI + G + Y F+EF A + LQ
Sbjct: 47 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD---GTNDPYAFVEFADHYTAAQALQ 103
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
N + E+ ++NWA+ + + DT H +FVGDL+ +V + L++ F A +
Sbjct: 104 AMNKRVLL--EKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 160
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--KTVS 258
AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K T +
Sbjct: 161 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 220
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
G QY + V + P+NT+V+VGN++S DE LR F ++G+++ V+I +
Sbjct: 221 GDGQYGRTELNYDDV-YNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQ 279
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS--NKQA 361
FV+F + A A+ +NG +L GQNI+ SWGR+P N+QA
Sbjct: 280 GYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTPEGHNQQA 324
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 262 QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGK 318
+Y + QN+ +D TV+VGNLD +T++ + LF Q G + K+
Sbjct: 26 RYHFQAAQNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTND 85
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 367
FV+FAD A +AL+ +N L + ++++W P + QA+ D ++
Sbjct: 86 PYAFVEFADHYTAAQALQAMNKRVLLEKEMKVNWATEPGS-QAKVDTSK 133
>gi|344287494|ref|XP_003415488.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Loxodonta africana]
Length = 287
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 121/178 (67%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE VV+VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVVSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVVSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|291400054|ref|XP_002716363.1| PREDICTED: tRNA selenocysteine associated protein 1 [Oryctolagus
cuniculus]
Length = 287
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 121/178 (67%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + +LN+A++G ++ D++P++++FVGDL ADV + ML E F YP
Sbjct: 64 KINGKPLPGATPAKRLKLNYATYG--KQPDNSPEYSLFVGDLTADVDEGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++PMR+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPMRLSVAIPKAS 178
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L + V
Sbjct: 64 KING-----KPLP-GATPAKRLKLNYATYGK---------QPDNSP-EYSLFVGDLTADV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
+ L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DEGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 MRLS 171
>gi|363742248|ref|XP_417743.3| PREDICTED: uncharacterized protein LOC419597 [Gallus gallus]
Length = 287
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 120/176 (68%), Gaps = 7/176 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE+V +VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL ADV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTADVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
S +G KVV+D+ G +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K
Sbjct: 122 SCRGGKVVLDQ-AGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 23/192 (11%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L + V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTADV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQAGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKP 167
Query: 348 IRLSWGRSPSNK 359
+RLS +N+
Sbjct: 168 VRLSVAIPKANR 179
>gi|73950095|ref|XP_535338.2| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 1
[Canis lupus familiaris]
Length = 287
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 121/178 (67%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|355726287|gb|AES08822.1| tRNA selenocysteine 1 associated protein 1 [Mustela putorius furo]
Length = 286
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 121/178 (67%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|348571058|ref|XP_003471313.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Cavia
porcellus]
Length = 287
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 121/178 (67%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|354472393|ref|XP_003498424.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Cricetulus griseus]
Length = 287
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 121/178 (67%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|8923460|ref|NP_060316.1| tRNA selenocysteine 1-associated protein 1 [Homo sapiens]
gi|149694993|ref|XP_001504030.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Equus
caballus]
gi|296207254|ref|XP_002750563.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Callithrix
jacchus]
gi|332245217|ref|XP_003271759.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 1
[Nomascus leucogenys]
gi|335290818|ref|XP_003356292.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Sus
scrofa]
gi|397515828|ref|XP_003828145.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Pan
paniscus]
gi|403308350|ref|XP_003944628.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Saimiri
boliviensis boliviensis]
gi|410966601|ref|XP_003989819.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Felis catus]
gi|426328634|ref|XP_004025356.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|426328636|ref|XP_004025357.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|74761781|sp|Q9NX07.1|TSAP1_HUMAN RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=SECp43; AltName: Full=tRNA
selenocysteine-associated protein 1
gi|7020651|dbj|BAA91217.1| unnamed protein product [Homo sapiens]
gi|12653787|gb|AAH00680.1| TRNA selenocysteine 1 associated protein 1 [Homo sapiens]
gi|119628094|gb|EAX07689.1| tRNA selenocysteine associated protein 1, isoform CRA_c [Homo
sapiens]
gi|261861114|dbj|BAI47079.1| tRNA selenocysteine 1 associated protein 1 [synthetic construct]
gi|410217052|gb|JAA05745.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
gi|410246780|gb|JAA11357.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
gi|410287892|gb|JAA22546.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
gi|410350233|gb|JAA41720.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
Length = 287
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 121/178 (67%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|169614620|ref|XP_001800726.1| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
gi|160702784|gb|EAT81850.2| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
Length = 506
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 189/422 (44%), Gaps = 54/422 (12%)
Query: 7 GAVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWA-------TQ 59
G +PPPP A Y Q AP Q PPP +P +++P P AM +
Sbjct: 9 GNLPPPP---GAPGYDGQHGAPQQHMPPPPLAP--VVIPQNTNPIPTAMGSPLPGNPGLD 63
Query: 60 AAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
A +P + G P++ R L++G L + E L F TG V +VK+I +K
Sbjct: 64 AMSPGSGGPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTV 123
Query: 120 GQIE------GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD 173
YGF+E+ AER + T NG + N E R+NWA ++DT +
Sbjct: 124 SSPSVNSKGFNYGFVEYDDPGAAERGMATLNGRRIHNNE--IRVNWAYQSNNTAKEDTSN 181
Query: 174 H-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
H IFVGDL+ +V D +L + F P ++ A+V+ D TGR++GYGFV F D ++ RA
Sbjct: 182 HFHIFVGDLSNEVNDEVLLQAFSTFGPVSE-ARVMWDMKTGRSRGYGFVAFRDRADAERA 240
Query: 233 MTEMNGVFCSTRPMRIGPATNK------------------KTVSGQQQYPKASYQNSQVA 274
++ M+G + +R +R A K T G +P Q+ +
Sbjct: 241 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTQGVQSYDMV 300
Query: 275 QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEA 334
+ TT +VGNL + L LF +G + + + + F++ A A
Sbjct: 301 VAQTPQWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMA 360
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSM 394
+ LNG + G+ ++ SWG+ +P Q+ +GY G +A PQ PS
Sbjct: 361 ICQLNGYNVNGRPLKCSWGKD------RPPTGQF--------EGYSPAGPNSAYPQTPSA 406
Query: 395 YY 396
Y+
Sbjct: 407 YF 408
>gi|395856824|ref|XP_003800818.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Otolemur
garnettii]
Length = 287
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 121/178 (67%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|115495097|ref|NP_001069435.1| tRNA selenocysteine 1-associated protein 1 [Bos taurus]
gi|122145885|sp|Q1RMJ7.1|TSAP1_BOVIN RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=tRNA selenocysteine-associated protein 1
gi|92098413|gb|AAI14859.1| TRNA selenocysteine 1 associated protein 1 [Bos taurus]
gi|296490008|tpg|DAA32121.1| TPA: tRNA selenocysteine 1-associated protein 1 [Bos taurus]
gi|440905999|gb|ELR56315.1| tRNA selenocysteine 1-associated protein 1 [Bos grunniens mutus]
Length = 287
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 120/178 (67%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNKKT 256
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPKAS 178
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|426221836|ref|XP_004005112.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Ovis aries]
Length = 287
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 120/178 (67%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNKKT 256
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPKAS 178
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|12711700|ref|NP_075416.1| tRNA selenocysteine 1-associated protein 1 [Rattus norvegicus]
gi|81917757|sp|Q9QZI7.1|TSAP1_RAT RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=SECp43; AltName: Full=tRNA
selenocysteine-associated protein 1
gi|5853317|gb|AAD54419.1|AF181856_1 tRNA selenocysteine associated protein [Rattus norvegicus]
Length = 287
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 120/178 (67%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V +P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKAS 178
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|402853636|ref|XP_003891498.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Papio
anubis]
gi|355764244|gb|EHH62272.1| hypothetical protein EGM_20511 [Macaca fascicularis]
gi|380785637|gb|AFE64694.1| tRNA selenocysteine 1-associated protein 1 [Macaca mulatta]
gi|383411005|gb|AFH28716.1| tRNA selenocysteine 1-associated protein 1 [Macaca mulatta]
gi|384939910|gb|AFI33560.1| tRNA selenocysteine 1-associated protein 1 [Macaca mulatta]
Length = 287
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 120/178 (67%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V +P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGAKPVRLSVAIPKAS 178
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGAKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|301755122|ref|XP_002913378.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like isoform
1 [Ailuropoda melanoleuca]
Length = 287
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 121/178 (67%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
S +G KVV+D+ TG +KGYGFV+F DE EQ RA++E G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALSECQGAVGLGSKPVRLSVAIPKAS 178
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALSECQGAVGLGSKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|398365523|ref|NP_009771.3| Ngr1p [Saccharomyces cerevisiae S288c]
gi|585555|sp|P32831.2|NGR1_YEAST RecName: Full=Negative growth regulatory protein NGR1; AltName:
Full=RNA-binding protein RBP1
gi|536596|emb|CAA85176.1| NGR1 [Saccharomyces cerevisiae]
gi|285810543|tpg|DAA07328.1| TPA: Ngr1p [Saccharomyces cerevisiae S288c]
Length = 672
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 180/426 (42%), Gaps = 130/426 (30%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DE + ++ + V VK+IR K+
Sbjct: 34 RTLWMGDLDPSFDEATIEEIWSKLDKKVIVKLIRAKKNLLIPCSSTSSSNNNTSEENAEN 93
Query: 119 -------TGQIE-----------------------GYGFIEFISRAGAERVLQTFNGTPM 148
T Q++ GY F+EF ++ A+ L + N TP+
Sbjct: 94 QQSASNSTDQLDNSQMININGISFIDPSTTQLHHAGYCFVEFETQKDAKFAL-SLNATPL 152
Query: 149 PNG-------------EQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQET 193
PN ++ FRLNWAS GA + TP+ ++FVGDL+ T+ L
Sbjct: 153 PNFYSPTTNSQTNPTFKRTFRLNWAS-GATLQSSIPSTPEFSLFVGDLSPTATEADLLSL 211
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT- 252
F+ R+ S K +V+ D LTG ++ +GFVRFGDE E+ RA+ EM+G + R +R+ AT
Sbjct: 212 FQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATP 271
Query: 253 ---------------------------------------NKKTVSGQQQYPKASYQN--- 270
N + P + N
Sbjct: 272 RNNMMLQLQEQQQQQQQLQQQHQQLDQEDNNGPLLIKTANNLIQNNSNMLPLNALHNAPP 331
Query: 271 --------SQVAQSDDDPNNT--------TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
S + +D P+NT TVFVG L T+ LR LF +G +++V+I
Sbjct: 332 MHLNEGGISNMRVNDSLPSNTYNTDPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRI 391
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 374
P GK CGFV+F R AE +++ L G +GG IRLSWGR PS+ A+ + A Y
Sbjct: 392 PNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR-PSSSNAKTNSTIMGASQYM 450
Query: 375 YAQGYE 380
+ G
Sbjct: 451 SSNGLR 456
>gi|392301060|gb|EIW12149.1| Ngr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 670
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 180/426 (42%), Gaps = 130/426 (30%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DE + ++ + V VK+IR K+
Sbjct: 34 RTLWMGDLDPSFDEATIEEIWSKLDKKVIVKLIRAKKNLLIPCSSTSSSNNNTSEENAEN 93
Query: 119 -------TGQIE-----------------------GYGFIEFISRAGAERVLQTFNGTPM 148
T Q++ GY F+EF ++ A+ L + N TP+
Sbjct: 94 QQSASNSTDQLDNSQMININGISFIDPSTTQLHHAGYCFVEFETQKDAKFAL-SLNATPL 152
Query: 149 PNG-------------EQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQET 193
PN ++ FRLNWAS GA + TP+ ++FVGDL+ T+ L
Sbjct: 153 PNFYSPTTNSQTNPTFKRTFRLNWAS-GATLQSSIPSTPEFSLFVGDLSPTATEADLLSL 211
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT- 252
F+ R+ S K +V+ D LTG ++ +GFVRFGDE E+ RA+ EM+G + R +R+ AT
Sbjct: 212 FQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATP 271
Query: 253 ---------------------------------------NKKTVSGQQQYPKASYQN--- 270
N + P + N
Sbjct: 272 RNNMMLQLQEQQQQQQQLQQQHQQLDQEDNNGPLLIKTANNLIQNNSNMLPLNALHNAPP 331
Query: 271 --------SQVAQSDDDPNNT--------TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
S + +D P+NT TVFVG L T+ LR LF +G +++V+I
Sbjct: 332 MHLNEGGISNMRVNDSLPSNTYNTDPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRI 391
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 374
P GK CGFV+F R AE +++ L G +GG IRLSWGR PS+ A+ + A Y
Sbjct: 392 PNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR-PSSSNAKANSTIMGASQYM 450
Query: 375 YAQGYE 380
+ G
Sbjct: 451 SSNGLR 456
>gi|349576587|dbj|GAA21758.1| K7_Ngr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 671
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 180/426 (42%), Gaps = 130/426 (30%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DE + ++ + V VK+IR K+
Sbjct: 34 RTLWMGDLDPSFDEATIEEIWSKLDKKVIVKLIRAKKNLLIPCSSTSSSNNNTSEENAEN 93
Query: 119 -------TGQIE-----------------------GYGFIEFISRAGAERVLQTFNGTPM 148
T Q++ GY F+EF ++ A+ L + N TP+
Sbjct: 94 QQSASNSTDQLDNSQMININGISFIDPSTTQLHHAGYCFVEFETQKDAKFAL-SLNATPL 152
Query: 149 PNG-------------EQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQET 193
PN ++ FRLNWAS GA + TP+ ++FVGDL+ T+ L
Sbjct: 153 PNFYSPTTNSQTNPTFKRTFRLNWAS-GATLQSSIPSTPEFSLFVGDLSPTATEADLLSL 211
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT- 252
F+ R+ S K +V+ D LTG ++ +GFVRFGDE E+ RA+ EM+G + R +R+ AT
Sbjct: 212 FQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATP 271
Query: 253 ---------------------------------------NKKTVSGQQQYPKASYQN--- 270
N + P + N
Sbjct: 272 RNNMMLQLQEQQQQQQQLQQQHQQLDQEDNNGPLLIKTANNLIQNNSNMLPLNALHNAPP 331
Query: 271 --------SQVAQSDDDPNNT--------TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
S + +D P+NT TVFVG L T+ LR LF +G +++V+I
Sbjct: 332 MHLNEGGISNMRVNDSLPSNTYNTDPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRI 391
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 374
P GK CGFV+F R AE +++ L G +GG IRLSWGR PS+ A+ + A Y
Sbjct: 392 PNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR-PSSSNAKTNSTIMGASQYM 450
Query: 375 YAQGYE 380
+ G
Sbjct: 451 SSNGLR 456
>gi|190408636|gb|EDV11901.1| glucose-repressible RNA binding protein [Saccharomyces cerevisiae
RM11-1a]
gi|290878229|emb|CBK39288.1| Ngr1p [Saccharomyces cerevisiae EC1118]
Length = 670
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 180/426 (42%), Gaps = 130/426 (30%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DE + ++ + V VK+IR K+
Sbjct: 34 RTLWMGDLDPSFDEATIEEIWSKLDKKVIVKLIRAKKNLLIPCSSTSSSNNNTSEENAEN 93
Query: 119 -------TGQIE-----------------------GYGFIEFISRAGAERVLQTFNGTPM 148
T Q++ GY F+EF ++ A+ L + N TP+
Sbjct: 94 QQSASNSTDQLDNSQMININGISFIDPSTTQLHHAGYCFVEFETQKDAKFAL-SLNATPL 152
Query: 149 PNG-------------EQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQET 193
PN ++ FRLNWAS GA + TP+ ++FVGDL+ T+ L
Sbjct: 153 PNFYSPTTNSQTNPTFKRTFRLNWAS-GATLQSSIPSTPEFSLFVGDLSPTATEADLLSL 211
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT- 252
F+ R+ S K +V+ D LTG ++ +GFVRFGDE E+ RA+ EM+G + R +R+ AT
Sbjct: 212 FQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATP 271
Query: 253 ---------------------------------------NKKTVSGQQQYPKASYQN--- 270
N + P + N
Sbjct: 272 RNNMMLQLQEQQQQQQQLQQQHQQLDQEDNNGPLLIKTANNLIQNNSNMLPLNALHNAPP 331
Query: 271 --------SQVAQSDDDPNNT--------TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
S + +D P+NT TVFVG L T+ LR LF +G +++V+I
Sbjct: 332 MHLNEGGISNMRVNDSLPSNTYNTDPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRI 391
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 374
P GK CGFV+F R AE +++ L G +GG IRLSWGR PS+ A+ + A Y
Sbjct: 392 PNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR-PSSSNAKTNSTIMGASQYM 450
Query: 375 YAQGYE 380
+ G
Sbjct: 451 SSNGLR 456
>gi|355557743|gb|EHH14523.1| hypothetical protein EGK_00465, partial [Macaca mulatta]
Length = 242
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 120/178 (67%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V +P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGAKPVRLSVAIPKAS 178
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGAKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|365766915|gb|EHN08404.1| Ngr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 669
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 180/426 (42%), Gaps = 130/426 (30%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DE + ++ + V VK+IR K+
Sbjct: 33 RTLWMGDLDPSFDEATIEEIWSKLDKKVIVKLIRAKKNLLIPCSSTSSSNNNTSEENAEN 92
Query: 119 -------TGQIE-----------------------GYGFIEFISRAGAERVLQTFNGTPM 148
T Q++ GY F+EF ++ A+ L + N TP+
Sbjct: 93 QQSASNSTDQLDNSQMININGISFIDPSTTQLHHAGYCFVEFETQKDAKFAL-SLNATPL 151
Query: 149 PNG-------------EQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQET 193
PN ++ FRLNWAS GA + TP+ ++FVGDL+ T+ L
Sbjct: 152 PNFYSPTTNSQTNPTFKRTFRLNWAS-GATLQSSIPSTPEFSLFVGDLSPTATEADLLSL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT- 252
F+ R+ S K +V+ D LTG ++ +GFVRFGDE E+ RA+ EM+G + R +R+ AT
Sbjct: 211 FQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATP 270
Query: 253 ---------------------------------------NKKTVSGQQQYPKASYQN--- 270
N + P + N
Sbjct: 271 RNNMMLQLQEQQQQQQQLQQQHQQLDQEDNNGPXLIKTANNLIQNNSNMLPLNALHNAPP 330
Query: 271 --------SQVAQSDDDPNNT--------TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
S + +D P+NT TVFVG L T+ LR LF +G +++V+I
Sbjct: 331 MHLNEGGISNMRVNDSLPSNTYNTDPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRI 390
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 374
P GK CGFV+F R AE +++ L G +GG IRLSWGR PS+ A+ + A Y
Sbjct: 391 PNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR-PSSSNAKTNSTIMGASQYM 449
Query: 375 YAQGYE 380
+ G
Sbjct: 450 SSNGLR 455
>gi|197101902|ref|NP_001127022.1| tRNA selenocysteine 1-associated protein 1 [Pongo abelii]
gi|75070420|sp|Q5R462.1|TSAP1_PONAB RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=tRNA selenocysteine-associated protein 1
gi|55733553|emb|CAH93454.1| hypothetical protein [Pongo abelii]
Length = 287
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 120/178 (67%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+ ++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYVTYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYVTYGK---------QPDNSP-EYSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|207347548|gb|EDZ73682.1| YBR212Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 617
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 180/425 (42%), Gaps = 130/425 (30%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DE + ++ + V VK+IR K+
Sbjct: 34 RTLWMGDLDPSFDEATIEEIWSKLDKKVIVKLIRAKKNLLIPCSSTSSSNNNTSEENAEN 93
Query: 119 -------TGQIE-----------------------GYGFIEFISRAGAERVLQTFNGTPM 148
T Q++ GY F+EF ++ A+ L + N TP+
Sbjct: 94 QQSASNSTDQLDNSQMININGISFIDPSTTQLHHAGYCFVEFETQKDAKFAL-SLNATPL 152
Query: 149 PNG-------------EQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQET 193
PN ++ FRLNWAS GA + TP+ ++FVGDL+ T+ L
Sbjct: 153 PNFYSPTTNSQTNPTFKRTFRLNWAS-GATLQSSIPSTPEFSLFVGDLSPTATEADLLSL 211
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT- 252
F+ R+ S K +V+ D LTG ++ +GFVRFGDE E+ RA+ EM+G + R +R+ AT
Sbjct: 212 FQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATP 271
Query: 253 ---------------------------------------NKKTVSGQQQYPKASYQN--- 270
N + P + N
Sbjct: 272 RNNMMLQLQEQQQQQQQLQQQHQQLDQEDNNGPLLIKTANNLIQNNSNMLPLNALHNAPP 331
Query: 271 --------SQVAQSDDDPNNT--------TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
S + +D P+NT TVFVG L T+ LR LF +G +++V+I
Sbjct: 332 MHLNEGGISNMRVNDSLPSNTYNTDPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRI 391
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 374
P GK CGFV+F R AE +++ L G +GG IRLSWGR PS+ A+ + A Y
Sbjct: 392 PNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR-PSSSNAKTNSTIMGASQYM 450
Query: 375 YAQGY 379
+ G
Sbjct: 451 SSNGL 455
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 179/383 (46%), Gaps = 44/383 (11%)
Query: 5 APGAVPPPPPPMAAHQ-YQYQQQAPPQ----QQPPPQPSPYMMMMPPQPQAQPPAMWATQ 59
A GA PPPP AA Q Y Q PQ PPP +P ++ PQ P T
Sbjct: 6 ASGANLPPPPASAAGQGYDNGGQGNPQASQGHMPPPPLAPVII-----PQNTNPI--PTA 58
Query: 60 AAAPQAAGVAVPPQQQG-------QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
++P + V P G +P + R L++G L + E L F G VV+VK
Sbjct: 59 ISSPMSGSVMSPTSAGGYVRRAAPEPNK-RALYVGGLDPRITEDVLRQIFETAGHVVSVK 117
Query: 113 VIRNKQTGQIEG--YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD 170
+I +K Q +G YGF+E+ AER +QT NG + E R+NWA + ++D
Sbjct: 118 IIPDKNKFQSKGLNYGFVEYDDPGTAERAMQTLNGRRVHQSE--IRVNWAYQSNNQPKED 175
Query: 171 TPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
T +H IFVGDL+ +V D +L + F A + A+V+ D TGR++GYGFV F D +
Sbjct: 176 TSNHFHIFVGDLSNEVNDEVLLQAFSA-FGQVSEARVMWDMKTGRSRGYGFVAFRDRGDA 234
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNK------------------KTVSGQQQYPKASYQNS 271
+A++ M+G + +R +R A K T G +P Q+
Sbjct: 235 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPYGHHHFPTHGVQSY 294
Query: 272 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 331
++ + TT +VGNL T L LF +G +V + + + F++ A
Sbjct: 295 EMVVNQTPQWQTTCYVGNLTPYTTQSDLVPLFQNFGYVVETRFQSDRGFAFIKMDTHENA 354
Query: 332 EEALRMLNGTQLGGQNIRLSWGR 354
A+ LNG + G+ ++ SWG+
Sbjct: 355 AMAICQLNGYNVNGRPLKCSWGK 377
>gi|256270156|gb|EEU05383.1| Ngr1p [Saccharomyces cerevisiae JAY291]
Length = 673
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 180/426 (42%), Gaps = 130/426 (30%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DE + ++ + V VK+IR K+
Sbjct: 34 RTLWMGDLDPSFDEATIEGIWSKLDKKVIVKLIRAKKNLLIPCSSTSSSNNNTSEENAEN 93
Query: 119 -------TGQIE-----------------------GYGFIEFISRAGAERVLQTFNGTPM 148
T Q++ GY F+EF ++ A+ L + N TP+
Sbjct: 94 QQSASNSTDQLDNSQMININGISFIDPSTTQLHHAGYCFVEFETQKDAKFAL-SLNATPL 152
Query: 149 PNG-------------EQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQET 193
PN ++ FRLNWAS GA + TP+ ++FVGDL+ T+ L
Sbjct: 153 PNFYSPTTNSQTNPTFKRTFRLNWAS-GATLQSSIPSTPEFSLFVGDLSPTATEADLLSL 211
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT- 252
F+ R+ S K +V+ D LTG ++ +GFVRFGDE E+ RA+ EM+G + R +R+ AT
Sbjct: 212 FQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATP 271
Query: 253 ---------------------------------------NKKTVSGQQQYPKASYQN--- 270
N + P + N
Sbjct: 272 RNNMMLQLQEQQQQQQQLQQQHQQLDQEDNNGPLLIKTANNLIQNNSNMLPLNALHNAPP 331
Query: 271 --------SQVAQSDDDPNNT--------TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
S + +D P+NT TVFVG L T+ LR LF +G +++V+I
Sbjct: 332 MHLNEGGISNMRVNDSLPSNTYNTDPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRI 391
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 374
P GK CGFV+F R AE +++ L G +GG IRLSWGR PS+ A+ + A Y
Sbjct: 392 PNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR-PSSSNAKTNSTIMGASQYM 450
Query: 375 YAQGYE 380
+ G
Sbjct: 451 SSNGLR 456
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 143/295 (48%), Gaps = 25/295 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ---TGQIEGYGFIEFISRAGAER 138
R L++G L + E L F TG VV+VK+I +K T + YGF+EF AER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQFTTKGHNYGFVEFDDPGAAER 150
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRAR 197
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A
Sbjct: 151 AMQTLNGRRIHQSE--IRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSA- 207
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--- 254
+ S A+V+ D TGR++GYGFV F D +E +A+ M+G + +R +R A K
Sbjct: 208 FGSVSEARVMWDMKTGRSRGYGFVAFRDRTEADKALNSMDGEWLGSRAIRCNWANQKGQP 267
Query: 255 ---------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 299
T G +P Q+ + TT +VGNL T L
Sbjct: 268 SISQQQALVAMGMTPTTAFGHHHFPTHGIQSYDMVAQQTPQWQTTCYVGNLTPYTTQNDL 327
Query: 300 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF +G ++ ++ A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 328 VPLFQNFGYVLETRLQADRGFAFVKMDSHENAASAICQLNGYNVNGRPLKCSWGK 382
>gi|62821783|ref|NP_082201.2| tRNA selenocysteine 1-associated protein 1 [Mus musculus]
gi|81912790|sp|Q80VC6.2|TSAP1_MOUSE RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=SECp43; AltName: Full=tRNA
selenocysteine-associated protein 1
gi|33416825|gb|AAH55454.1| TRNA selenocysteine 1 associated protein 1 [Mus musculus]
gi|66840156|gb|AAH48840.2| TRNA selenocysteine 1 associated protein 1 [Mus musculus]
gi|74225435|dbj|BAE31634.1| unnamed protein product [Mus musculus]
gi|148698163|gb|EDL30110.1| tRNA selenocysteine associated protein 1, isoform CRA_a [Mus
musculus]
Length = 287
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 119/178 (66%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
S +G KVV+D TG +KGYGFV+F DE EQ RA+TE G V +P+R+ A K +
Sbjct: 122 SCRGGKVVLDP-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKAS 178
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDPTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|116283942|gb|AAH05795.1| Trnau1ap protein [Mus musculus]
Length = 221
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 119/178 (66%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
S +G KVV+D TG +KGYGFV+F DE EQ RA+TE G V +P+R+ A K +
Sbjct: 122 SCRGGKVVLDP-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKAS 178
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 23/184 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSPE-YSLFVGDLTPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDPTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKP 167
Query: 348 IRLS 351
+RLS
Sbjct: 168 VRLS 171
>gi|151946599|gb|EDN64821.1| glucose-repressible RNA binding protein [Saccharomyces cerevisiae
YJM789]
Length = 670
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 179/426 (42%), Gaps = 130/426 (30%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DE + ++ + V VK+IR K+
Sbjct: 34 RTLWMGDLDPSFDEATIEEIWSKLDKKVIVKLIRAKKNLLIPCSSTSSSNNNTSEENAEN 93
Query: 119 -------TGQIE-----------------------GYGFIEFISRAGAERVLQTFNGTPM 148
T Q++ GY F+EF ++ A+ L + N TP+
Sbjct: 94 QQSASNSTDQLDNSQMININGISFIDPSTTQLHHAGYCFVEFETQKDAKFAL-SLNATPL 152
Query: 149 PNG-------------EQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQET 193
PN ++ FRLNWAS GA + TP+ ++FVGDL+ T+ L
Sbjct: 153 PNFYSPTTNSQTNPTFKRTFRLNWAS-GATLQSSIPSTPEFSLFVGDLSPTATEADLLSL 211
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT- 252
F+ R+ S K +V+ D LTG ++ +GFVRFGDE E+ RA+ EM+G + R +R+ AT
Sbjct: 212 FQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATP 271
Query: 253 ---------------------------------------NKKTVSGQQQYPKASYQN--- 270
N + P + N
Sbjct: 272 RNNMMLQLQEQQQQQQQLQQQHQQLDQEDNNGPLLIKTANNLIQNNSNMLPLNTLHNAPP 331
Query: 271 --------SQVAQSDDDPNNT--------TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
S + +D P+NT TVFVG L T+ LR LF +G +++V I
Sbjct: 332 MHLNEGGISNMRVNDSLPSNTYNTDPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVTI 391
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 374
P GK CGFV+F R AE +++ L G +GG IRLSWGR PS+ A+ + A Y
Sbjct: 392 PNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR-PSSSNAKTNSTIMGASQYM 450
Query: 375 YAQGYE 380
+ G
Sbjct: 451 SSNGLR 456
>gi|387019429|gb|AFJ51832.1| tRNA selenocysteine 1-associated protein 1 [Crotalus adamanteus]
Length = 286
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 120/176 (68%), Gaps = 7/176 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA G++V +VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGQLVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL+ DV D M+ E F YP
Sbjct: 64 KINGKPLPGATPTKRFKLNYATYG--KQPDNSPEYSLFVGDLSPDVDDGMIYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+ E G V ++P+R+ A K
Sbjct: 122 SCRGGKVVVDQ-TGVSKGYGFVKFSDELEQKRALVECQGAVGLGSKPIRLSVAIPK 176
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 23/192 (11%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGQLVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FVG+L V
Sbjct: 64 KING-----KPLP-GATPTKRFKLNYATYGK---------QPDNSP-EYSLFVGDLSPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D + E F + G++V + K GFV+F+D + AL G LG +
Sbjct: 108 DDGMIYEFFVKVYPSCRGGKVVVDQTGVSKGYGFVKFSDELEQKRALVECQGAVGLGSKP 167
Query: 348 IRLSWGRSPSNK 359
IRLS +N+
Sbjct: 168 IRLSVAIPKANR 179
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 144/294 (48%), Gaps = 24/294 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERV 139
R L++G L + E L F TG VV+VK+I +NK + YGF+EF AER
Sbjct: 90 RALYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 149
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +LQ+ F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEILQQAFSA-F 206
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---- 254
S A+V+ D TGR++GYGFV F D ++ +A+ M+G + +R +R A K
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRDRADADKALGSMDGEWLGSRAIRCNWANQKGQPS 266
Query: 255 --------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
T G +P Q+ + TT +VGNL T L
Sbjct: 267 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLV 326
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 327 PLFQNFGYVLETRLQADRGFAFIKMDSHENAAMAICQLNGYNVNGRPLKCSWGK 380
>gi|164424152|ref|XP_962723.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
gi|157070397|gb|EAA33487.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
Length = 480
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 190/441 (43%), Gaps = 54/441 (12%)
Query: 4 PAPGAVPPPPPPMAA---HQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQA 60
P G +PPPP P A ++ A PPP + +P P A+ +
Sbjct: 8 PTTGQLPPPPQPNAGAPGYENGQNNNANSAHMPPPP-----LHIPQNTNPIPTAITSPMG 62
Query: 61 AAPQAAGVAVPPQQQGQPG--------EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
+G+ + P G P R L++G L + E L F TG V VK
Sbjct: 63 GNGDTSGI-MSPTSAGNPFGRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVK 121
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP 172
+I +K YGF+E+ AER +QT NG + E R+NWA + ++DT
Sbjct: 122 IIPDKNQKGYN-YGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNNQNKEDTS 178
Query: 173 DH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
H IFVGDL+ +V D +L + F A + S A+V+ D TGR++GYGFV F D + +
Sbjct: 179 GHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEK 237
Query: 232 AMTEMNGVFCSTRPMRIGPATNK------------------KTVSGQQQYPKASYQNSQV 273
A++ M+G + +R +R A K T G +P + +
Sbjct: 238 ALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDM 297
Query: 274 AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEE 333
+ TT +VGNL T L LF +G +V + A + F++ A
Sbjct: 298 IVAQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAFIKMDTHENAAM 357
Query: 334 ALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPS 393
A+ LNG Q+ G+ ++ SWG+ + Q DPNQ + GY P PS
Sbjct: 358 AICQLNGYQVNGRPLKCSWGKDKTPNPQQFDPNQPYSPQSAQTPGY---------PGTPS 408
Query: 394 MYY----GGYPG-YGNYQQPQ 409
Y+ YPG GNY PQ
Sbjct: 409 TYFNNYGNSYPGQQGNYNGPQ 429
>gi|323349799|gb|EGA84014.1| Ngr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 593
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 180/426 (42%), Gaps = 130/426 (30%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DE + ++ + V VK+IR K+
Sbjct: 33 RTLWMGDLDPSFDEATIEEIWSKLDKKVIVKLIRAKKNLLIPCSSTSSSNNNTSEENAEN 92
Query: 119 -------TGQIE-----------------------GYGFIEFISRAGAERVLQTFNGTPM 148
T Q++ GY F+EF ++ A+ L + N TP+
Sbjct: 93 QQSASNSTDQLDNSQMININGISFIDPSTTQLHHAGYCFVEFETQKDAKFAL-SLNATPL 151
Query: 149 PNG-------------EQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQET 193
PN ++ FRLNWAS GA + TP+ ++FVGDL+ T+ L
Sbjct: 152 PNFYSPTTNSQTNPTFKRTFRLNWAS-GATLQSSIPSTPEFSLFVGDLSPTATEADLLSL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT- 252
F+ R+ S K +V+ D LTG ++ +GFVRFGDE E+ RA+ EM+G + R +R+ AT
Sbjct: 211 FQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATP 270
Query: 253 ---------------------------------------NKKTVSGQQQYPKASYQN--- 270
N + P + N
Sbjct: 271 RNNMMLQLQEQQQQQQQLQQQHQQLDQEDNNGPLLIKTANNLIQNNSNMLPLNALHNAPP 330
Query: 271 --------SQVAQSDDDPNN--------TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
S + +D P+N TTVFVG L T+ LR LF +G +++V+I
Sbjct: 331 MHLNEGGISNMRVNDSLPSNTYNTDPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRI 390
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 374
P GK CGFV+F R AE +++ L G +GG IRLSWGR PS+ A+ + A Y
Sbjct: 391 PNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR-PSSSNAKTNSTIMGASQYM 449
Query: 375 YAQGYE 380
+ G
Sbjct: 450 SSNGLR 455
>gi|323338729|gb|EGA79945.1| Ngr1p [Saccharomyces cerevisiae Vin13]
Length = 594
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 180/426 (42%), Gaps = 130/426 (30%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DE + ++ + V VK+IR K+
Sbjct: 34 RTLWMGDLDPSFDEATIEEIWSKLDKKVIVKLIRAKKNLLIPCSSTSSSNNNTSEENAEN 93
Query: 119 -------TGQIE-----------------------GYGFIEFISRAGAERVLQTFNGTPM 148
T Q++ GY F+EF ++ A+ L + N TP+
Sbjct: 94 QQSASNSTDQLDNSQMININGISFIDPSTTQLHHAGYCFVEFETQKDAKFAL-SLNATPL 152
Query: 149 PNG-------------EQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQET 193
PN ++ FRLNWAS GA + TP+ ++FVGDL+ T+ L
Sbjct: 153 PNFYSPTTNSQTNPTFKRTFRLNWAS-GATLQSSIPSTPEFSLFVGDLSPTATEADLLSL 211
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT- 252
F+ R+ S K +V+ D LTG ++ +GFVRFGDE E+ RA+ EM+G + R +R+ AT
Sbjct: 212 FQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATP 271
Query: 253 ---------------------------------------NKKTVSGQQQYPKASYQN--- 270
N + P + N
Sbjct: 272 RNNMMLQLQEQQQQQQQLQQQHQQLDQEDNNGPLLIKTANNLIQNNSNMLPLNALHNAPP 331
Query: 271 --------SQVAQSDDDPNN--------TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
S + +D P+N TTVFVG L T+ LR LF +G +++V+I
Sbjct: 332 MHLNEGGISNMRVNDSLPSNTYNTDPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRI 391
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 374
P GK CGFV+F R AE +++ L G +GG IRLSWGR PS+ A+ + A Y
Sbjct: 392 PNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR-PSSSNAKTNSTIMGASQYM 450
Query: 375 YAQGYE 380
+ G
Sbjct: 451 SSNGLR 456
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 143/293 (48%), Gaps = 23/293 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ-TGQIEGYGFIEFISRAGAERVL 140
R L++G L + E L F TG VV+VK+I +K T + YGF+EF AER +
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFTTKGHNYGFVEFDDPGAAERAM 150
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 151 QTLNGRRIHQSE--IRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSA-FG 207
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----- 254
S A+V+ D TGR++GYGFV F D +E +A+ M+G + +R +R A K
Sbjct: 208 SVSEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSMDGEWLGSRAIRCNWANQKGQPSI 267
Query: 255 -------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 301
T G +P Q+ + TT +VGNL T L
Sbjct: 268 SQQQALVAMGMTPTTPFGHHHFPTHGIQSYDMVAQQTPQWQTTCYVGNLTPYTTQNDLVP 327
Query: 302 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF +G ++ ++ A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 328 LFQNFGYVLETRLQADRGFAFVKMDSHENAASAICQLNGYNVNGRPLKCSWGK 380
>gi|196008869|ref|XP_002114300.1| hypothetical protein TRIADDRAFT_57967 [Trichoplax adhaerens]
gi|190583319|gb|EDV23390.1| hypothetical protein TRIADDRAFT_57967 [Trichoplax adhaerens]
Length = 344
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 116/174 (66%), Gaps = 7/174 (4%)
Query: 89 LQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP 147
L+ +MDET++ FA G V++VK+IRN+ G GY F++F AE L+ NG P
Sbjct: 46 LETYMDETFIRNAFASVGRTVLSVKLIRNRVVGGPAGYCFVDFPDPQSAEDCLKQVNGLP 105
Query: 148 MP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAK 205
+P N ++ F+LNWA+ GA + + P+ +IFVGDL DVTD +L+ F R+PS KGAK
Sbjct: 106 LPGSNPQKRFKLNWATHGARDAGN--PEFSIFVGDLTPDVTDLVLRNFFCERFPSCKGAK 163
Query: 206 VVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNKKTVS 258
VVID+ G ++GYGFVRFGDE+E RA+ EM G C RP+R+ AT KKT++
Sbjct: 164 VVIDQ-GGNSRGYGFVRFGDENEHTRALNEMQGASGCGGRPIRVSLATPKKTMN 216
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 27/172 (15%)
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
++ F + + K++ +R+ G GY FV F D + ++NG+ P+
Sbjct: 54 FIRNAFASVGRTVLSVKLIRNRVVGGPAGYCFVDFPDPQSAEDCLKQVNGL-----PL-- 106
Query: 249 GPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNN--TTVFVGNLDSIVTDEHLRELFSQY 306
P +N P+ ++ + D N ++FVG+L VTD LR F +
Sbjct: 107 -PGSN----------PQKRFKLNWATHGARDAGNPEFSIFVGDLTPDVTDLVLRNFFCER 155
Query: 307 -----GQLVHVKIPAGKR-CGFVQFADRSCAEEALRMLNGTQ-LGGQNIRLS 351
G V + R GFV+F D + AL + G GG+ IR+S
Sbjct: 156 FPSCKGAKVVIDQGGNSRGYGFVRFGDENEHTRALNEMQGASGCGGRPIRVS 207
>gi|350291093|gb|EGZ72307.1| hypothetical protein NEUTE2DRAFT_144798 [Neurospora tetrasperma
FGSC 2509]
Length = 490
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 192/450 (42%), Gaps = 62/450 (13%)
Query: 4 PAPGAVPPPPPPMAA---HQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQA 60
P G +PPPP P A ++ A PPP + +P P A+ +
Sbjct: 8 PTTGQLPPPPQPNAGAPGYENGQNNNANSAHMPPPP-----LHIPQNTNPIPTAITSPMG 62
Query: 61 AAPQAAGVAVPPQQQGQP--------GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
+G+ + P G P R L++G L + E L F TG V VK
Sbjct: 63 GNGDTSGI-MSPTSAGNPFGRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVK 121
Query: 113 VIRNKQTGQIEG---------YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG 163
+I +K G+ YGF+E+ AER +QT NG + E R+NWA
Sbjct: 122 IIPDKNVGKPGSEQPRQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQS 179
Query: 164 AGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
+ ++DT H IFVGDL+ +V D +L + F A + S A+V+ D TGR++GYGFV
Sbjct: 180 NNQNKEDTSGHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVA 238
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------------------KTVSGQQQYP 264
F D + +A++ M+G + +R +R A K T G +P
Sbjct: 239 FRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFP 298
Query: 265 KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
+ + + TT +VGNL T L LF +G +V + A + F++
Sbjct: 299 THGVHSYDMIVAQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAFIK 358
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGY 384
A A+ LNG Q+ G+ ++ SWG+ + Q DPNQ + GY
Sbjct: 359 MDTHENAAMAICQLNGYQVNGRPLKCSWGKDKTPNPQQFDPNQPYSPQSAQTPGY----- 413
Query: 385 AAAAPQDPSMYY----GGYPG-YGNYQQPQ 409
P PS Y+ YPG GNY PQ
Sbjct: 414 ----PGTPSTYFNNYGNSYPGQQGNYNGPQ 439
>gi|336373915|gb|EGO02253.1| hypothetical protein SERLA73DRAFT_86524 [Serpula lacrymans var.
lacrymans S7.3]
Length = 611
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 151/298 (50%), Gaps = 71/298 (23%)
Query: 124 GYGFIEFISRAGAERVLQTF--NGT----PMPNGEQNFRLNWASFGAGEKRDDTP----- 172
GY F+ F S + A+ VL NG+ MPN + F LNWAS +TP
Sbjct: 39 GYCFLTFPSPSLAQSVLAQVANNGSGQPVTMPNSSKPFVLNWAS-----SVPNTPIAQQQ 93
Query: 173 ---DHTIFVGDLAADVTDYMLQETFRA--------RYP-------STKGAKVVIDRLTGR 214
+++IFVGDLA + ++ L FR R P S K AK+++D +TG
Sbjct: 94 YPREYSIFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPVTGV 153
Query: 215 TKGYGFVRFGDESEQLRAMTEMNGVFCSTRP-----------MRIG-----PATNKKTVS 258
++GYGFVRF +E++Q RA+ EM+G++C +RP +++G PA
Sbjct: 154 SRGYGFVRFTEEADQQRALIEMHGLYCLSRPTAQQYSSTNAAIKVGGVTTNPAGATFAPD 213
Query: 259 GQQQYPKASYQNSQVA---------------------QSDDDPNNTTVFVGNLDSIVTDE 297
GQ Q Y S+ + + DP NTTVFVG L ++++E
Sbjct: 214 GQDQNGAPRYMISEESWKHHAQARAILGNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEE 273
Query: 298 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
LR F+ +G + +VK+P GK CGFVQF ++ AE A+ + G +GG IRLSWGRS
Sbjct: 274 TLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKMQGFPIGGSRIRLSWGRS 331
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K G F++F+ +A AER ++
Sbjct: 260 TVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCG------FVQFVRKADAERAIEK 313
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 314 MQGFPI--GGSRIRLSW 328
>gi|308801969|ref|XP_003078298.1| DNA-binding protein (ISS) [Ostreococcus tauri]
gi|116056749|emb|CAL53038.1| DNA-binding protein (ISS) [Ostreococcus tauri]
Length = 452
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 156/325 (48%), Gaps = 65/325 (20%)
Query: 94 DETYLNTCFAHTGEVVA-VKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP----- 147
D Y+ F+ + +A VK+IRN+ TG EGYGFIEF SR A+ + + +G+
Sbjct: 62 DAAYVYYAFSSVWKSLAHVKLIRNRATGLSEGYGFIEFNSRDEADSLSKLLSGSQCRERC 121
Query: 148 -----MPNGEQNFRLNWA------SFGAG-----------------------EKRDDTPD 173
M E ++ A S G+ E D D
Sbjct: 122 TVNEMMTTKEDAVKMYSAPTTPKQSEGSSRSVLAPRSESGSSEGSPEIEADMEDEADIQD 181
Query: 174 HTIFV--------------GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
T V GDL +DV + +L E F+++ + A+VV+D T R KGYG
Sbjct: 182 ETDIVDDGNVQTADYSVFVGDLGSDVNETILCEHFKSKCSTAHNARVVVDLKTFRPKGYG 241
Query: 220 FVRFGDESEQLRAMTEMNGVFC--STRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSD 277
FV F E + + A++ G C S R MR+ A +K P+ ++ +
Sbjct: 242 FVDFKTEKDYMTALSAFQGSRCGSSDRQMRVCNAFERK--------PEPVIDVTKFHDFE 293
Query: 278 D-DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALR 336
D DP NTT+F+GNLD VT+EHLR +F ++G++ + K K CGFV F DR A EA+
Sbjct: 294 DMDPQNTTIFIGNLDHNVTEEHLRVVFEEFGEIAYAKATPKKGCGFVHFFDRQDATEAIE 353
Query: 337 MLNGTQLGGQNIRLSWGRSPSNKQA 361
L+G+ +G + +RLSWGR + K A
Sbjct: 354 NLHGSMIGSKRVRLSWGRHNATKCA 378
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 26/200 (13%)
Query: 83 TLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
++++GDL ++ET L F + +V+ + +T + +GYGF++F + L
Sbjct: 197 SVFVGDLGSDVNETILCEHFKSKCSTAHNARVVVDLKTFRPKGYGFVDFKTEKDYMTALS 256
Query: 142 TFNGTPMPNGEQNFR------------LNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
F G+ + ++ R ++ F E D + TIF+G+L +VT+
Sbjct: 257 AFQGSRCGSSDRQMRVCNAFERKPEPVIDVTKFHDFEDM-DPQNTTIFIGNLDHNVTEEH 315
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L+ F + ++ + T + KG GFV F D + A+ ++G ++ +R+
Sbjct: 316 LRVVFE------EFGEIAYAKATPK-KGCGFVHFFDRQDATEAIENLHGSMIGSKRVRLS 368
Query: 250 PATNKKTVSG-----QQQYP 264
+ T QQQYP
Sbjct: 369 WGRHNATKCAIASMYQQQYP 388
>gi|342870153|gb|EGU73450.1| hypothetical protein FOXB_16088 [Fusarium oxysporum Fo5176]
Length = 474
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 199/437 (45%), Gaps = 57/437 (13%)
Query: 6 PGAVPPPPPPMA-AHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQ 64
PG +PPPP A A ++ Q P PP + +P P A+ + ++AA Q
Sbjct: 10 PGQLPPPPQAGAGAPGFEAGQNGQPMAPPP-------LHIPQNTNPIPTAITSPRSAADQ 62
Query: 65 AAGVAVPPQQQG------QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ 118
G+ P G +P + R L+IG L + E L F TG V VK+I +K
Sbjct: 63 G-GIMSPTSAGGFRRAAPEPNK-RALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKN 120
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIF 177
+ YGF+E+ AER +QT NG + E R+NWA ++DT +H IF
Sbjct: 121 A-RGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTTNKEDTSNHFHIF 177
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ +V D +L + F A + S A+V+ D TGR++GYGFV F D E +A++ M+
Sbjct: 178 VGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMD 236
Query: 238 GVFCSTRPMRIGPATNK------------------KTVSGQQQYPKASYQNSQVAQSDDD 279
G + +R +R A K T G Q+P + +V +
Sbjct: 237 GEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTP 296
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 339
TTV+VGNL T + LF +G +V + A + F++ A A+ +N
Sbjct: 297 SWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMN 356
Query: 340 GTQLGGQNIRLSWGRSPS-NKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY--- 395
G + G+ ++ SWG+ + + Q DP Q + A G+ P P+ Y
Sbjct: 357 GYNVNGRPLKCSWGKDKTPSAQGAFDPAQPYSPQSAQAPGF---------PGTPTYYPQY 407
Query: 396 ---YGGYPGYGNYQQPQ 409
YGG P GNY PQ
Sbjct: 408 GAQYGGQP--GNYGGPQ 422
>gi|336469273|gb|EGO57435.1| hypothetical protein NEUTE1DRAFT_129383 [Neurospora tetrasperma
FGSC 2508]
Length = 494
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 194/454 (42%), Gaps = 66/454 (14%)
Query: 4 PAPGAVPPPPPPMAA---HQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQA 60
P G +PPPP P A ++ A PPP + +P P A+ +
Sbjct: 8 PTTGQLPPPPQPNAGAPGYENGQNNNANSAHMPPPP-----LHIPQNTNPIPTAITSPMG 62
Query: 61 AAPQAAGVAVPPQQQGQP--------GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
+G+ + P G P R L++G L + E L F TG V VK
Sbjct: 63 GNGDTSGI-MSPTSAGNPFGRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVK 121
Query: 113 VIRNKQTG-----------QIEGY--GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159
+I +K G Q +GY GF+E+ AER +QT NG + E R+NW
Sbjct: 122 IIPDKNVGKPGSEQPRDEKQQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNW 179
Query: 160 ASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGY 218
A + ++DT H IFVGDL+ +V D +L + F A + S A+V+ D TGR++GY
Sbjct: 180 AYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGY 238
Query: 219 GFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------------------KTVSGQ 260
GFV F D + +A++ M+G + +R +R A K T G
Sbjct: 239 GFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGH 298
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 320
+P + + + TT +VGNL T L LF +G +V + A +
Sbjct: 299 HHFPTHGVHSYDMIVAQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGF 358
Query: 321 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYE 380
F++ A A+ LNG Q+ G+ ++ SWG+ + Q DPNQ + GY
Sbjct: 359 AFIKMDTHENAAMAICQLNGYQVNGRPLKCSWGKDKTPNPQQFDPNQPYSPQSAQTPGY- 417
Query: 381 NYGYAAAAPQDPSMYY----GGYPG-YGNYQQPQ 409
P PS Y+ YPG GNY PQ
Sbjct: 418 --------PGTPSTYFNNYGNSYPGQQGNYNGPQ 443
>gi|336271351|ref|XP_003350434.1| hypothetical protein SMAC_02147 [Sordaria macrospora k-hell]
gi|380090956|emb|CCC11489.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 495
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 179/408 (43%), Gaps = 53/408 (12%)
Query: 4 PAPGAVPPPPPPMAA---HQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQA 60
P G +PPPP P A ++ + P PPP + +P P A+ +
Sbjct: 8 PTTGQLPPPPQPNAGAPGYENGQNNNSNPAHMPPPP-----LHIPQNTNPIPTAITSPMG 62
Query: 61 AAPQAAGVAVPPQQQGQP--------GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
+G+ + P G P R L++G L + E L F TG V VK
Sbjct: 63 GNGDTSGI-MSPTSAGNPFGRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVK 121
Query: 113 VIRNKQTG------------QIEGY--GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158
+I +K G Q +GY GF+E+ AER +QT NG + E R+N
Sbjct: 122 IIPDKNVGKPGSPEQPHDAQQQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVN 179
Query: 159 WASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKG 217
WA + ++DT H IFVGDL+ +V D +L + F A + S A+V+ D TGR++G
Sbjct: 180 WAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRG 238
Query: 218 YGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------------------KTVSG 259
YGFV F D + +A++ M+G + +R +R A K T G
Sbjct: 239 YGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYG 298
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
+P + + + TT +VGNL T L LF +G +V + A +
Sbjct: 299 HHHFPTHGVHSYDMIVAQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRG 358
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 367
F++ A A+ LNG Q+ G+ ++ SWG+ + Q DPNQ
Sbjct: 359 FAFIKMDTHENAAMAICQLNGYQVNGRPLKCSWGKDKTPNPQQFDPNQ 406
>gi|126328777|ref|XP_001365071.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Monodelphis domestica]
Length = 287
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 119/176 (67%), Gaps = 7/176 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FV DL+ DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVRDLSPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
S +G KVV+D+ G +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K
Sbjct: 122 SCRGGKVVLDQ-AGISKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 102/260 (39%), Gaps = 56/260 (21%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FV +L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSPE-YSLFVRDLSPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQAGISKGYGFVKFTDELEQKRALTECQGAVGLGSKP 167
Query: 348 IRLSWGRSPSNKQAQPDPNQWNAGY-----------------YGYAQGYENYGYAAAAPQ 390
+RLS +N+ P +++ Y +GY Q +Y Y+
Sbjct: 168 VRLSVAIPKANRVK---PMEYSQMYSYSLNQYYQQYQNYYAQWGYDQNTGSYSYS----- 219
Query: 391 DPSMYYGGYPGYGNYQQPQQ 410
YP YG Q Q
Sbjct: 220 --------YPQYGYTQSTMQ 231
>gi|395521932|ref|XP_003765068.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Sarcophilus
harrisii]
Length = 287
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 119/176 (67%), Gaps = 7/176 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FV DL+ DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVRDLSPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
S +G KVV+D+ G +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K
Sbjct: 122 SCRGGKVVLDQ-AGISKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 102/252 (40%), Gaps = 40/252 (15%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG +P+ G K+ Y K Q D+ P ++FV +L V
Sbjct: 64 KING-----KPLP-GATPAKRFKLNYATYGK---------QPDNSPE-YSLFVRDLSPDV 107
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K GFV+F D + AL G LG +
Sbjct: 108 DDGMLYEFFVKVYPSCRGGKVVLDQAGISKGYGFVKFTDELEQKRALTECQGAVGLGSKP 167
Query: 348 IRLSWGRSPSNKQAQPDPNQWNAGYYGYA---------QGYENYGYAAAAPQDPSMYYGG 398
+RLS +N+ + +Q Y Y+ Y +GY Q+ Y
Sbjct: 168 VRLSVAIPKANRVKPLEYSQM----YSYSLNQYYQQYQNYYAQWGY----DQNTGSYSYS 219
Query: 399 YPGYGNYQQPQQ 410
YP YG Q Q
Sbjct: 220 YPQYGYTQSTMQ 231
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 178/388 (45%), Gaps = 40/388 (10%)
Query: 6 PGAVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQA 65
PG +PPP A Y+ Q P PP + +P P A+ + ++A
Sbjct: 10 PGQLPPPQAGAGAPGYEAGQNGQPMAPPP-------LHIPQNNNPIPTAITSPRSA--DN 60
Query: 66 AGVAVPPQQQG------QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
G+ P G +P + R L+IG L + E L F TG V VK+I +K
Sbjct: 61 GGIMSPTSAGGFRRAAPEPNK-RALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNA 119
Query: 120 GQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFV 178
+ YGF+E+ AER +QT NG + E R+NWA ++DT +H IFV
Sbjct: 120 -RGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTTNKEDTSNHFHIFV 176
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL+ +V D +L + F A + S A+V+ D TGR++GYGFV F D E +A++ M+G
Sbjct: 177 GDLSNEVNDEVLTQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDG 235
Query: 239 VFCSTRPMRIGPATNK------------------KTVSGQQQYPKASYQNSQVAQSDDDP 280
+ +R +R A K T G Q+P + +V +
Sbjct: 236 EWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPS 295
Query: 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 340
TTV+VGNL T + LF +G +V + A + F++ A A+ +NG
Sbjct: 296 WQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDSHENAAMAICQMNG 355
Query: 341 TQLGGQNIRLSWGRSPS-NKQAQPDPNQ 367
+ G+ ++ SWG+ + N Q DP Q
Sbjct: 356 YNVNGRPLKCSWGKDKTPNAQGGFDPVQ 383
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 181/397 (45%), Gaps = 47/397 (11%)
Query: 6 PGAVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQA 65
PG +PPP A Y+ Q P PP + +P P A+ + ++A
Sbjct: 10 PGQLPPPQAGAGAPGYEAGQNGQPMAPPP-------LHIPQNNNPIPTAITSPRSA--DN 60
Query: 66 AGVAVPPQQQG------QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
G+ P G +P + R L+IG L + E L F TG V VK+I +K
Sbjct: 61 GGIMSPTSAGGFRRAAPEPNK-RALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNA 119
Query: 120 GQIEGYGFIEFISRAGAERVLQTFNG------TPMPNGEQN---FRLNWASFGAGEKRDD 170
+ YGF+E+ AER +QT NG P P+ +N R+NWA ++D
Sbjct: 120 -RGYNYGFVEYDDPGAAERAMQTLNGRRVHQSVPYPDTTRNSKEIRVNWAYQSNTTNKED 178
Query: 171 TPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
T +H IFVGDL+ +V D +L + F A + S A+V+ D TGR++GYGFV F D E
Sbjct: 179 TSNHFHIFVGDLSNEVNDEVLTQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPEA 237
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNK------------------KTVSGQQQYPKASYQNS 271
+A++ M+G + +R +R A K T G Q+P +
Sbjct: 238 EKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASY 297
Query: 272 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 331
+V + TTV+VGNL T + LF +G +V + A + F++ A
Sbjct: 298 EVILTQTPSWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDSHENA 357
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPS-NKQAQPDPNQ 367
A+ +NG + G+ ++ SWG+ + N Q DP Q
Sbjct: 358 AMAICQMNGYNVNGRPLKCSWGKDKTPNAQGGFDPVQ 394
>gi|320165313|gb|EFW42212.1| nucleic acid binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1042
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 115/176 (65%), Gaps = 7/176 (3%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW GDL+ DE+++++ F GE VV VK+I+N+ TG GY F++F + A RVL
Sbjct: 5 LWFGDLEPSWDESFISSLFGQAGEPVVGVKIIKNRLTGGPAGYCFVDFGNSDRAVRVLHA 64
Query: 143 FNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG +P + + FRLN A + +G R++ P++++FVGDL ADVTD+ L F+ Y S
Sbjct: 65 LNGAQIPGLDPSRRFRLNLALY-SGATRNE-PEYSLFVGDLTADVTDFQLHSFFKQLYAS 122
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKK 255
K AKVV+D+ G KG+GFVRF D ++ LRA+ EMNG V C +PMR+ AT K+
Sbjct: 123 CKTAKVVVDQ-AGTPKGFGFVRFTDSNDCLRALLEMNGAVGCGGKPMRVSAATPKR 177
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 53/77 (68%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRM 337
DD NTTV+VG L V+ E L+ +FS +G +V V+IP GK CGFVQFA AE+A+
Sbjct: 579 DDSINTTVYVGGLSPHVSAEELKAIFSLFGDIVGVRIPQGKACGFVQFAQHGNAEQAIAH 638
Query: 338 LNGTQLGGQNIRLSWGR 354
LNG +GGQ IRLSWG
Sbjct: 639 LNGQYIGGQPIRLSWGH 655
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 73/187 (39%), Gaps = 31/187 (16%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
++ GDL + + F G K++ +RLTG GY FV FG+ +R +
Sbjct: 5 LWFGDLEPSWDESFISSLFGQAGEPVVGVKIIKNRLTGGPAGYCFVDFGNSDRAVRVLHA 64
Query: 236 MNGV----FCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
+NG +R R+ A + +Y ++FVG+L
Sbjct: 65 LNGAQIPGLDPSRRFRLNLALYSGATRNEPEY--------------------SLFVGDLT 104
Query: 292 SIVTDEHLRELFSQ-YGQLVHVKIPAG-----KRCGFVQFADRS-CAEEALRMLNGTQLG 344
+ VTD L F Q Y K+ K GFV+F D + C L M G
Sbjct: 105 ADVTDFQLHSFFKQLYASCKTAKVVVDQAGTPKGFGFVRFTDSNDCLRALLEMNGAVGCG 164
Query: 345 GQNIRLS 351
G+ +R+S
Sbjct: 165 GKPMRVS 171
>gi|365761964|gb|EHN03583.1| Ngr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 666
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 174/408 (42%), Gaps = 130/408 (31%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DE + ++ + V VK+IR K+
Sbjct: 33 RTLWMGDLDPSFDEATIEEIWSKLNKKVIVKLIRAKKNLLIPCSSTSSSNTNTNEENGEN 92
Query: 119 ----------------------------TGQIE--GYGFIEFISRAGAERVLQTFNGTPM 148
T Q+ GY F+EF ++ A+ L + N TP+
Sbjct: 93 QQSASNSSDQLDNSQMININGVSFIDPSTTQLHHAGYCFVEFETQKDAQFAL-SLNATPL 151
Query: 149 PNG-------------EQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQET 193
PN ++ FRLNWAS GA + TP+ ++FVGDL+ T+ L
Sbjct: 152 PNFYSPTTNAQTNPTFKRTFRLNWAS-GATLQSSIPSTPEFSLFVGDLSPTATEADLLSL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT- 252
F+ R+ S K +V+ D LTG ++ +GFVRFG+E E+ RA+ EM+G + R +R+ AT
Sbjct: 211 FQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGNEDERRRALIEMSGKWFQGRALRVAYATP 270
Query: 253 ---------------------------------------NKKTVSGQQQYPKASYQ---- 269
N S P + Q
Sbjct: 271 RNNMMLQLQEQQQQQQLQPNQSQQQEQEDNQGPLLVKTANDLIQSNSNMLPLNAIQNGPP 330
Query: 270 -------NSQVAQSDDDPNN--------TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
NS V ++ P+N TTVFVG L + LR LF +G +++V+I
Sbjct: 331 MPSKEGGNSNVRANEFLPSNTYNSDPTNTTVFVGGLVPKTAEFQLRSLFKPFGPILNVRI 390
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA 361
P GK CGFV+F R AE +++ L G +GG IRLSWGR S SN +A
Sbjct: 391 PNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGRPSSSNAKA 438
>gi|198421765|ref|XP_002125303.1| PREDICTED: similar to tRNA selenocysteine-associated protein 1
(SECp43) [Ciona intestinalis]
Length = 324
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 113/176 (64%), Gaps = 6/176 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R+LW+GDL+ +MDET++N F + V+VKVIR K G GY FIEF S A AERVL+
Sbjct: 3 RSLWMGDLEPYMDETFVNKAFLQVSQPVSVKVIRRKDNGLPAGYCFIEFPSEAEAERVLK 62
Query: 142 TFNGTPM--PNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NGT + N + FRLN + AG+ D P +IFVGDL A VTD L++ F RY
Sbjct: 63 LVNGTTINGSNPPKRFRLNRSQ--AGKMWDIGPSFSIFVGDLDATVTDDKLEDFFLKRYR 120
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNK 254
S KGAK++ + G ++GYGFVRF DE+EQ RA+ EM G+ +P+R+ AT K
Sbjct: 121 SVKGAKIMYEE-GGISRGYGFVRFSDEAEQKRALQEMQGIRGLGAKPIRVSVATPK 175
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
++++GDL + + + + F + KV+ + G GY F+ F E+E R +
Sbjct: 3 RSLWMGDLEPYMDETFVNKAF-LQVSQPVSVKVIRRKDNGLPAGYCFIEFPSEAEAERVL 61
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSI 293
+NG T++G + SQ + D + ++FVG+LD+
Sbjct: 62 KLVNGT----------------TINGSNPPKRFRLNRSQAGKMWDIGPSFSIFVGDLDAT 105
Query: 294 VTDEHLRELF-SQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQ-LGGQ 346
VTD+ L + F +Y + KI + GFV+F+D + + AL+ + G + LG +
Sbjct: 106 VTDDKLEDFFLKRYRSVKGAKIMYEEGGISRGYGFVRFSDEAEQKRALQEMQGIRGLGAK 165
Query: 347 NIRLSWGRSPSNKQA 361
IR+S +P K A
Sbjct: 166 PIRVSVA-TPKGKMA 179
>gi|115473341|ref|NP_001060269.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|23237933|dbj|BAC16506.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113611805|dbj|BAF22183.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|215737207|dbj|BAG96136.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767365|dbj|BAG99593.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637457|gb|EEE67589.1| hypothetical protein OsJ_25126 [Oryza sativa Japonica Group]
Length = 427
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 157/291 (53%), Gaps = 24/291 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + E L F TG V K+IR +++ YGF+++ R A +
Sbjct: 65 RSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSS----YGFVDYYDRRSAALSIL 120
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + Q R+NWA + +G++ D T IFVGDL+ +VTD L F Y S
Sbjct: 121 TLNGKQIFG--QLIRVNWA-YASGQREDTTDHFNIFVGDLSPEVTDSALFAFFSG-YSSC 176
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D+ TGR++GYGFV F ++ + A+ ++NG + +R +R AT K +G+Q
Sbjct: 177 SDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIRCNWAT-KGASNGEQ 235
Query: 262 QYPKAS---------YQNSQVAQSDDDPNNT----TVFVGNLDSIVTDEHLRELFSQY-- 306
Q + ++ + ++D P N TV+VGNL VT + L LF
Sbjct: 236 QTSDSKNVADLTNNLTEDGKEKANEDAPENNPQYRTVYVGNLAHEVTQDVLHRLFHALGA 295
Query: 307 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G + V+I GK GFV++++ + A A++M NG LGG+ I+ SWG P+
Sbjct: 296 GAIEEVRIQLGKGFGFVRYSNHAEAALAIQMGNGRILGGKPIKCSWGNKPT 346
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 31/206 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +L+E F++ +G K++ YGFV + D
Sbjct: 60 DTSTCRSVYVGNVHVQVTEALLREVFQST-GLVEGCKLI----RKEKSSYGFVDYYDRRS 114
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
++ +NG K + GQ +Y + Q +D ++ +FVG
Sbjct: 115 AALSILTLNG----------------KQIFGQLIRVNWAYAS---GQREDTTDHFNIFVG 155
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ G FV F ++ A+ A+ LNG
Sbjct: 156 DLSPEVTDSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQW 215
Query: 343 LGGQNIRLSWG-RSPSNKQAQPDPNQ 367
LG + IR +W + SN + Q ++
Sbjct: 216 LGSRQIRCNWATKGASNGEQQTSDSK 241
>gi|159480296|ref|XP_001698220.1| hypothetical protein CHLREDRAFT_193148 [Chlamydomonas reinhardtii]
gi|158273718|gb|EDO99505.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1212
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 113/173 (65%), Gaps = 6/173 (3%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++FVGDL +V D+ L+ FR +PS + AKV++D +TGR+KG+GFVRF E E+ RA+
Sbjct: 13 SLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMMDNITGRSKGFGFVRFAVEGERDRALN 72
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQ--SDDDPNNTTVFVGNLDS 292
EMNGVF S+R + + VS ++ + Q + DP NTT+FVG L +
Sbjct: 73 EMNGVFISSRQHTL----SASAVSALAPCASNTHCRNTPTQLPGELDPQNTTLFVGGLSA 128
Query: 293 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
V+++ LR +F +YG++ +VKIP GK CGFV FADR AE A++ +NGT +GG
Sbjct: 129 HVSEDALRGVFGRYGEISYVKIPPGKGCGFVHFADRQAAEYAMQEVNGTIIGG 181
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 22/173 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFA-HTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+L++GDL + + +L + F + V + KV+ + TG+ +G+GF+ F +R L
Sbjct: 13 SLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMMDNITGRSKGFGFVRFAVEGERDRALN 72
Query: 142 TFNGTPMPNGEQNFRLNWAS----FGAGEKRDDTP----------DHTIFVGDLAADVTD 187
NG + + + + S + +TP + T+FVG L+A V++
Sbjct: 73 EMNGVFISSRQHTLSASAVSALAPCASNTHCRNTPTQLPGELDPQNTTLFVGGLSAHVSE 132
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L+ F RY K+ KG GFV F D AM E+NG
Sbjct: 133 DALRGVF-GRYGEISYVKI------PPGKGCGFVHFADRQAAEYAMQEVNGTI 178
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 57 ATQAAAPQAAGVAVPPQQQGQPGEI----RTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
A A AP A+ PGE+ TL++G L + E L F GE+ VK
Sbjct: 90 AVSALAPCASNTHCRNTPTQLPGELDPQNTTLFVGGLSAHVSEDALRGVFGRYGEISYVK 149
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNF 155
+ K G GF+ F R AE +Q NGT + G N+
Sbjct: 150 IPPGK------GCGFVHFADRQAAEYAMQEVNGT-IIGGSANY 185
>gi|218200015|gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indica Group]
Length = 427
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 156/291 (53%), Gaps = 24/291 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + E L F TG V K+IR +++ YGF+++ R A +
Sbjct: 65 RSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSS----YGFVDYYDRRSAALAIL 120
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + Q R+NWA + +G++ D T IFVGDL+ +VTD L F Y S
Sbjct: 121 TLNGKQIFG--QLIRVNWA-YASGQREDTTDHFNIFVGDLSPEVTDSALFAFFSG-YSSC 176
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D+ TGR++GYGFV F ++ + A+ ++NG + +R +R AT K +G+Q
Sbjct: 177 SDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIRCNWAT-KGASNGEQ 235
Query: 262 QYPKAS---------YQNSQVAQSDDDPNNT----TVFVGNLDSIVTDEHLRELFSQY-- 306
Q + ++ + ++D P N TV+VGNL VT + L LF
Sbjct: 236 QTSDSKNVADLTNNLTEDGKEKANEDVPENNPQYRTVYVGNLAHEVTQDVLHRLFHALGA 295
Query: 307 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G + V+I GK GFV+++ + A A++M NG LGG+ I+ SWG P+
Sbjct: 296 GAIEEVRIQLGKGFGFVRYSSHTEAALAIQMGNGRILGGKPIKCSWGNKPT 346
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 31/206 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +L+E F++ +G K++ YGFV + D
Sbjct: 60 DTSTCRSVYVGNVHVQVTEALLREVFQST-GLVEGCKLI----RKEKSSYGFVDYYDRRS 114
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG K + GQ +Y + Q +D ++ +FVG
Sbjct: 115 AALAILTLNG----------------KQIFGQLIRVNWAYAS---GQREDTTDHFNIFVG 155
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ G FV F ++ A+ A+ LNG
Sbjct: 156 DLSPEVTDSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQW 215
Query: 343 LGGQNIRLSWG-RSPSNKQAQPDPNQ 367
LG + IR +W + SN + Q ++
Sbjct: 216 LGSRQIRCNWATKGASNGEQQTSDSK 241
>gi|302904116|ref|XP_003049006.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729940|gb|EEU43293.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 474
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 131/433 (30%), Positives = 192/433 (44%), Gaps = 55/433 (12%)
Query: 9 VPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGV 68
+PPPP P A Q Q Q PPP + +P P A+ T + G+
Sbjct: 13 LPPPPEPNAGAQGFQGGQNGSQALPPPP-----LHIPQNTNPIPTAI--TSPRSGDQGGI 65
Query: 69 AVPPQQQG------QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI 122
P G +P + R L++G L + E L F TG V VK+I +K +
Sbjct: 66 MSPTSAGGFRRAAPEPNK-RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNA-RG 123
Query: 123 EGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDL 181
YGF+E+ AER +QT NG + E R+NWA ++DT +H IFVGDL
Sbjct: 124 YNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTSNKEDTSNHFHIFVGDL 181
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ +V D +L + F A + S A+V+ D TGR++GYGFV F D + +A++ M+G +
Sbjct: 182 SNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWL 240
Query: 242 STRPMRIGPATNK------------------KTVSGQQQYPKASYQNSQVAQSDDDPNNT 283
+R +R A K T G Q+P + +V + T
Sbjct: 241 GSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQT 300
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQL 343
T +VGNL T + LF +G +V + A + F++ A A+ +NG +
Sbjct: 301 TCYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNV 360
Query: 344 GGQNIRLSWGRSPS-NKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY------Y 396
G+ ++ SWG+ + N Q DP Q + A GY P P+ Y Y
Sbjct: 361 NGRPLKCSWGKDKTPNAQGGFDPAQPYSPQSAQAPGY---------PGTPTFYPQYGAQY 411
Query: 397 GGYPGYGNYQQPQ 409
GG P GNY PQ
Sbjct: 412 GGQP--GNYGGPQ 422
>gi|326524289|dbj|BAK00528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 429
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 39/339 (11%)
Query: 41 MMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQ--PG----EIRTLWIGDLQYWMD 94
M MPP PP AA PQ + P G PG R++++G++ +
Sbjct: 23 MYAMPP-----PPHHHLLGAAPPQQ----IEPILTGNLPPGFDTSTCRSVYVGNIHVQVT 73
Query: 95 ETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQN 154
E L F G V K+IR +++ YGF+++ R A + T NG + Q
Sbjct: 74 EALLREVFQSAGSVDGCKLIRKEKSS----YGFVDYYERGSAALAILTLNGKQIFG--QP 127
Query: 155 FRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGR 214
R+NWA + +G++ D T IFVGDL+ +VTD L F A P+ A+V+ D+ TGR
Sbjct: 128 IRVNWA-YASGQREDTTDHFHIFVGDLSPEVTDSALFAFFSAYSPNCSDARVMWDQKTGR 186
Query: 215 TKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKAS------- 267
++GYGFV F ++ + A+ ++NG + R +R AT K SG+ Q S
Sbjct: 187 SRGYGFVSFRNQQDAQSAINDLNGQWLGNRQIRCNWAT-KGANSGEDQLASDSKSIVDVN 245
Query: 268 ---YQNSQVAQSDDDPNNT----TVFVGNLDSIVTDEHLRELFSQY--GQLVHVKIPAGK 318
+N++ ++D P N TV+VGNL VT + L F G + V++ GK
Sbjct: 246 NNFTENAKQKSNEDAPENNPLYRTVYVGNLAHEVTQDVLHRFFHALGAGAIEEVRVQHGK 305
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
GFV++++ + A++ NG LGG+ ++ SWG P+
Sbjct: 306 GFGFVKYSNHAETALAIQTGNGRILGGKPVKCSWGNKPT 344
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 31/197 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +L+E F++ S G K++ YGFV + +
Sbjct: 56 DTSTCRSVYVGNIHVQVTEALLREVFQSA-GSVDGCKLI----RKEKSSYGFVDYYERGS 110
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG +P+R+ N SGQ++ D ++ +FVG
Sbjct: 111 AALAILTLNGKQIFGQPIRV----NWAYASGQRE---------------DTTDHFHIFVG 151
Query: 289 NLDSIVTDEHLRELFSQYG-------QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 341
+L VTD L FS Y + K + GFV F ++ A+ A+ LNG
Sbjct: 152 DLSPEVTDSALFAFFSAYSPNCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQ 211
Query: 342 QLGGQNIRLSWGRSPSN 358
LG + IR +W +N
Sbjct: 212 WLGNRQIRCNWATKGAN 228
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 335
D +V+VGN+ VT+ LRE+F G + K+ ++ GFV + +R A A+
Sbjct: 56 DTSTCRSVYVGNIHVQVTEALLREVFQSAGSVDGCKLIRKEKSSYGFVDYYERGSAALAI 115
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQAQPD 364
LNG Q+ GQ IR++W + ++ D
Sbjct: 116 LTLNGKQIFGQPIRVNWAYASGQREDTTD 144
>gi|384484722|gb|EIE76902.1| hypothetical protein RO3G_01606 [Rhizopus delemar RA 99-880]
Length = 204
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 107/164 (65%), Gaps = 3/164 (1%)
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNS 271
TG ++GYGFVRF D+ EQ +A+TEMNG+ C RPMR+ AT K + Q++Y + + Q
Sbjct: 6 TGLSRGYGFVRFSDQQEQQQAVTEMNGILCKNRPMRVSFATPK--TNNQERYIQLALQAP 63
Query: 272 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 331
+ Q DPNNTTVF+G L S VT++ LR+ F +G +++VK+P GK CGFVQ+ R A
Sbjct: 64 ALVQQPTDPNNTTVFIGGLSSPVTEDELRQYFGSFGDIMNVKLPPGKGCGFVQYTTRISA 123
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQW-NAGYYG 374
E A+ +NG +G IRLSWGRS +++ + Q N ++G
Sbjct: 124 ETAIEKMNGFLIGTSRIRLSWGRSSNHQSDTMNSKQMANNDFFG 167
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 114 IRNKQTGQIEGYGFIEFISRAGAERVLQTFNG-------------TPMPNGEQNF-RLNW 159
+ N TG GYGF+ F + ++ + NG TP N ++ + +L
Sbjct: 1 MTNSSTGLSRGYGFVRFSDQQEQQQAVTEMNGILCKNRPMRVSFATPKTNNQERYIQLAL 60
Query: 160 ASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
+ ++ D + T+F+G L++ VT+ L++ F + G + + G KG G
Sbjct: 61 QAPALVQQPTDPNNTTVFIGGLSSPVTEDELRQYF-----GSFGDIMNVKLPPG--KGCG 113
Query: 220 FVRFGDESEQLRAMTEMNGVFCSTRPMRI--GPATNKKT 256
FV++ A+ +MNG T +R+ G ++N ++
Sbjct: 114 FVQYTTRISAETAIEKMNGFLIGTSRIRLSWGRSSNHQS 152
>gi|323356144|gb|EGA87949.1| Ngr1p [Saccharomyces cerevisiae VL3]
Length = 562
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 154/331 (46%), Gaps = 77/331 (23%)
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPNG-------------EQNFRLNWASFGAGEKRD- 169
GY F+EF ++ A+ L + N TP+PN ++ FRLNWAS GA +
Sbjct: 21 GYCFVEFETQKDAKFAL-SLNATPLPNFYSPTTNSQTNPTFKRTFRLNWAS-GATLQSSI 78
Query: 170 -DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
TP+ ++FVGDL+ T+ L F+ R+ S K +V+ D LTG ++ +GFVRFGDE E
Sbjct: 79 PSTPEFSLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDE 138
Query: 229 QLRAMTEMNGVFCSTRPMRIGPAT------------------------------------ 252
+ RA+ EM+G + R +R+ AT
Sbjct: 139 RRRALIEMSGKWFQGRALRVAYATPRNNMMLQLQEQQQQQQQLQQQHQQLDQEDNNGPLL 198
Query: 253 ----NKKTVSGQQQYPKASYQN-----------SQVAQSDDDPNNT--------TVFVGN 289
N + P + N S + +D P+NT TVFVG
Sbjct: 199 IKTANNLIQNNSNMLPLNALHNAPPMHLNEGGISNMRVNDSLPSNTYNTDPTNTTVFVGG 258
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 349
L T+ LR LF +G +++V+IP GK CGFV+F R AE +++ L G +GG IR
Sbjct: 259 LVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIR 318
Query: 350 LSWGRSPSNKQAQPDPNQWNAGYYGYAQGYE 380
LSWGR PS+ A+ + A Y + G
Sbjct: 319 LSWGR-PSSSNAKTNSTIMGASQYMSSNGLR 348
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 144/294 (48%), Gaps = 24/294 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERV 139
R L++G L + E L F TG VV+VK+I +NK + YGF+EF AER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 151 MQTLNGRRIHQSE--IRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEILLQAFSA-F 207
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---- 254
S A+V+ D TGR++GYGFV F + S+ +A++ M+G + +R +R A K
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 255 --------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
T G +P Q+ + TT +VGNL + L
Sbjct: 268 ISQQQAMAAMGMTPTTPFGHHHFPTHGMQSYDMVVQQTPQWQTTCYVGNLTPYTSQNDLV 327
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 328 PLFQNFGFVLETRLQADRGFAFIKMDSHENAAMAICQLNGYNVNGRPLKCSWGK 381
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 143/293 (48%), Gaps = 23/293 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ-TGQIEGYGFIEFISRAGAERVL 140
R L++G L + E L F TG V++VK+I +K + YGF+EF AER +
Sbjct: 90 RALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFNSKGANYGFVEFDDPGAAERAM 149
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 150 QTLNGRRIHQSE--IRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FG 206
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----- 254
S A+V+ D TGR++GYGFV F + ++ +A+T M+G + +R +R A K
Sbjct: 207 SVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQKGQPSI 266
Query: 255 -------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 301
T G +P Q+ + TT +VGNL T +
Sbjct: 267 SQQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMVVQQTPAWQTTCYVGNLTPYTTQNDIVP 326
Query: 302 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 327 LFQNFGYVIETRMQADRGFAFIKMDTHENAASAICQLNGYNVNGRPLKCSWGK 379
>gi|453087889|gb|EMF15930.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 486
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 164/342 (47%), Gaps = 28/342 (8%)
Query: 34 PPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWM 93
PP P+P + + PQ P T +P +AG V ++ R L++G L +
Sbjct: 36 PPPPAPSLNVNIPQ-NHNPVPTELTDILSPTSAGGQV--RRAAPEPNKRALYVGGLDPRV 92
Query: 94 DETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY--GFIEFISRAGAERVLQTFNGTPMPNG 151
E L F TG V +VK+I +K Q +GY GF+E+ AER +QT NG +
Sbjct: 93 TEDVLKQIFETTGHVQSVKIIPDKNF-QSKGYNYGFVEYDDPGAAERAMQTLNGRRV--H 149
Query: 152 EQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR 210
+Q R+NWA ++DT +H IFVGDL+ +V D +L + F A + + A+V+ D
Sbjct: 150 QQEIRVNWAYQSNTSAKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGTVSEARVMWDM 208
Query: 211 LTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---------------- 254
TGR++GYGF F D E +A++ M+G + +R +R A K
Sbjct: 209 KTGRSRGYGFAAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMAQMGM 268
Query: 255 --KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 312
T G Q+P Q+ ++ TTV+VGNL T L LF +G +
Sbjct: 269 TPTTPYGHHQFPTQGSQSYEMIVQQTPQWQTTVYVGNLTPYTTQNDLVPLFQNFGYVTET 328
Query: 313 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ + + F++ A A+ L+G Q+ G+ ++ SWG+
Sbjct: 329 RFQSDRGFAFIKMDTHENAANAICQLSGYQVNGRPLKCSWGK 370
>gi|340905400|gb|EGS17768.1| putative polyadenylated RNA protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 485
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 151/307 (49%), Gaps = 26/307 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V +VK+I +K + YGF+E+ AER +Q
Sbjct: 93 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNH-RGYNYGFVEYDDPGAAERAMQ 151
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 152 TLNGRRVHQNE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLWQAFSA-FGS 208
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K
Sbjct: 209 ISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIH 268
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P + + + TT +VGNL T L L
Sbjct: 269 QQQAMQQMGMTPTTPYGHHHFPTHGIHSYDMVVNQTPAWQTTCYVGNLTPYTTQNDLVPL 328
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG--RSPSNKQ 360
F +G +V ++ A + F++ A A+ LNG + G+ ++ SWG R+P++ Q
Sbjct: 329 FQNFGYVVECRMQADRGFAFIKMDSHENAAMAICQLNGYMVNGRPLKCSWGKDRNPNHHQ 388
Query: 361 AQPDPNQ 367
Q DPN
Sbjct: 389 -QFDPNH 394
>gi|440635298|gb|ELR05217.1| hypothetical protein GMDG_01655 [Geomyces destructans 20631-21]
Length = 503
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 158/344 (45%), Gaps = 37/344 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG--YGFIEFISRAGAERV 139
R L++G L + E L F TG V VK+I +K G +G YGF+E+ AER
Sbjct: 89 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGASKGFNYGFVEYDDPGAAERA 148
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 149 MQTLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFCA-F 205
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---- 254
S A+V+ D TGR++GYGFV F + + +A++ M+G + +R +R A K
Sbjct: 206 GSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPS 265
Query: 255 --------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
T G +P Q+ + TTV+VGNL T L
Sbjct: 266 ISQQQSMVSTGLTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTVYVGNLTPYTTQNDLV 325
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
LF +G +V + + + FV+ A A+ L+G + G+ ++ SWG+ + Q
Sbjct: 326 PLFQNFGYVVETRFQSDRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDKAPSQ 385
Query: 361 AQPDPNQWNAGYYGYAQGYE-NYGYAAAAPQDPSMY---YGGYP 400
G+ G GY A P PS Y YGG P
Sbjct: 386 ---------PGFEGTPTGYSPQSAQTPAYPGTPSAYFPQYGGMP 420
>gi|326932968|ref|XP_003212582.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Meleagris gallopavo]
Length = 307
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 114/170 (67%), Gaps = 7/170 (4%)
Query: 89 LQYWMDETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP 147
L+ +MDE +++ FA GE+V +VK+IRN+ TG GY F+EF A AE+ L NG P
Sbjct: 30 LEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 89
Query: 148 MPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAK 205
+P + F+LN+A++G ++ D++P++++FVGDL ADV D ML E F YPS +G K
Sbjct: 90 LPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTADVDDGMLYEFFVKVYPSCRGGK 147
Query: 206 VVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
VV+D+ G +KGYGFV+F DE EQ RA+TE G V ++PMR+ A K
Sbjct: 148 VVLDQ-AGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPMRLSVAIPK 196
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 190 LQETFRARYPSTKG-----AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+ E F +R +T G K++ +RLTG GY FV F D + + + ++NG +
Sbjct: 34 MDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----K 88
Query: 245 PMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
P+ G K+ Y K Q D+ P ++FVG+L + V D L E F
Sbjct: 89 PLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTADVDDGMLYEFFV 137
Query: 305 QY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 357
+ G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 138 KVYPSCRGGKVVLDQAGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPMRLSVAIPKV 197
Query: 358 NK 359
N+
Sbjct: 198 NR 199
>gi|67517823|ref|XP_658695.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
gi|40747053|gb|EAA66209.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
Length = 892
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 144/294 (48%), Gaps = 24/294 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG--YGFIEFISRAGAERV 139
R L++G L + E L F TG V++VK+I +K +G YGF+EF AER
Sbjct: 90 RALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNQFNSKGANYGFVEFDDPGAAERA 149
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 206
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---- 254
S A+V+ D TGR++GYGFV F + ++ +A+T M+G + +R +R A K
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQKGQPS 266
Query: 255 --------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
T G +P Q+ + TT +VGNL T +
Sbjct: 267 ISQQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMVVQQTPAWQTTCYVGNLTPYTTQNDIV 326
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 327 PLFQNFGYVIETRMQADRGFAFIKMDTHENAASAICQLNGYNVNGRPLKCSWGK 380
>gi|429863469|gb|ELA37920.1| nuclear and cytoplasmic polyadenylated rna-binding protein pub1
[Colletotrichum gloeosporioides Nara gc5]
Length = 479
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 150/307 (48%), Gaps = 25/307 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K + YGF+E+ AER +Q
Sbjct: 86 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNA-KGYNYGFVEYDDPGAAERAMQ 144
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 145 TLNGRRVHQSE--IRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSA-FGS 201
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K
Sbjct: 202 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 261
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G Q+P + +V + TT +VGNL T + L
Sbjct: 262 QQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPL 321
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG--RSPSNKQ 360
F +G +V + A + F++ A A+ +NG + G+ ++ SWG ++P+ +
Sbjct: 322 FQNFGYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKDKTPNPQS 381
Query: 361 AQPDPNQ 367
A DP+Q
Sbjct: 382 AGFDPSQ 388
>gi|190344618|gb|EDK36327.2| hypothetical protein PGUG_00425 [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 162/296 (54%), Gaps = 21/296 (7%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRN-KQTGQIEGYGFIEFISRA 134
+P +W+GDL +E + ++ GE V++K++++ ++ G GY F+ F + A
Sbjct: 78 KPRNENQVWMGDLDPRWNEQAIADIWSQIGESPVSIKIMKDGREPGG--GYCFVSF-ANA 134
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGE----KRDDTP--DHTIFVGDLAADVTDY 188
A + T+NG+P+PN ++F+LN AS G +R+ P D +IFVGDLA DV++
Sbjct: 135 NAVQTALTYNGSPIPNSSKHFKLNIASRGKNTATDIQRNSKPANDFSIFVGDLAMDVSEP 194
Query: 189 MLQETFRARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
+L E F + +P K K+++D T +KG+GFVRF D + Q +A+TE NG+ +R +R
Sbjct: 195 ILYEAFNSLFPDQVKQVKIMMDNSTRASKGFGFVRFFDANTQAKALTEANGMVVGSRAIR 254
Query: 248 IGPA--TNK-----KTVSGQQQYPKASYQNSQVAQSD--DDPNNTTVFVGNLDSIVTDEH 298
+G A +NK V + A + ++ + DP N T+ V L VT+E
Sbjct: 255 VGMAAGSNKPQPVTNIVHSDRLASPAIEEEVKLPKHARFSDPTNNTIVVHGLSGKVTEEE 314
Query: 299 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
L S +G++++ + + G+V+F +R AE A+ + G + I++SWG
Sbjct: 315 LALHLSSFGEILYCTLSSDFDSGYVKFYNRQDAETAIFFMYGQIINDCRIQVSWGH 370
>gi|146422214|ref|XP_001487048.1| hypothetical protein PGUG_00425 [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 162/296 (54%), Gaps = 21/296 (7%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRN-KQTGQIEGYGFIEFISRA 134
+P +W+GDL +E + ++ GE V++K++++ ++ G GY F+ F + A
Sbjct: 78 KPRNENQVWMGDLDPRWNEQAIADIWSQIGESPVSIKIMKDGREPGG--GYCFVSF-ANA 134
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGE----KRDDTP--DHTIFVGDLAADVTDY 188
A + T+NG+P+PN ++F+LN AS G +R+ P D +IFVGDLA DV++
Sbjct: 135 NAVQTALTYNGSPIPNSSKHFKLNIASRGKNTATDIQRNSKPANDFSIFVGDLAMDVSEP 194
Query: 189 MLQETFRARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
+L E F + +P K K+++D T +KG+GFVRF D + Q +A+TE NG+ +R +R
Sbjct: 195 ILYEAFNSLFPDQVKQVKIMMDNSTRASKGFGFVRFFDANTQAKALTEANGMVVGSRAIR 254
Query: 248 IGPA--TNK-----KTVSGQQQYPKASYQNSQVAQSD--DDPNNTTVFVGNLDSIVTDEH 298
+G A +NK V + A + ++ + DP N T+ V L VT+E
Sbjct: 255 VGMAAGSNKPQPVTNIVHSDRLASPAIEEEVKLPKHARFSDPTNNTIVVHGLSGKVTEEE 314
Query: 299 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
L S +G++++ + + G+V+F +R AE A+ + G + I++SWG
Sbjct: 315 LALHLSSFGEILYCTLSSDFDSGYVKFYNRQDAETAIFFMYGQIINDCRIQVSWGH 370
>gi|357121988|ref|XP_003562698.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 427
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 157/318 (49%), Gaps = 34/318 (10%)
Query: 63 PQAAGVAVPPQQQGQP------------GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVA 110
PQ + PP QQ +P R++++G++ + E L F TG V
Sbjct: 31 PQHHLLGAPPPQQIEPILTGNLPPGFDASTCRSVYVGNIHVHVTEAVLREVFQSTGSVEG 90
Query: 111 VKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD 170
K+IR +++ YGF+++ R A + NG + Q R+NWA + +G++ D
Sbjct: 91 CKLIRKEKSS----YGFVDYYERGSAALAILQLNGRQIFG--QPIRVNWA-YASGQREDT 143
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
T IFVGDL+A+VTD L F S A+V+ D+ TGR++GYGFV F ++ +
Sbjct: 144 TDHFNIFVGDLSAEVTDSALFAFFSGYSSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQ 203
Query: 231 RAMTEMNGVFCSTRPMRIGPATN-KKTVSGQQQYPKASY--------QNSQVAQSDDDPN 281
A+ ++NG + R +R AT +V QQ S ++ + ++D P
Sbjct: 204 SAINDLNGQWLGNRQIRCNWATKGANSVEDQQTSDSKSIAGVTNNFTEDGKEKANEDAPE 263
Query: 282 NT----TVFVGNLDSIVTDEHLRELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEAL 335
N TV+VGNL T + L F G + V++ GK GFV+++ + A A+
Sbjct: 264 NNPLYRTVYVGNLAHEATQDVLHRFFYALGAGAIEEVRVQHGKGFGFVKYSSHAEAALAI 323
Query: 336 RMLNGTQLGGQNIRLSWG 353
+M NG LGG+ I+ SWG
Sbjct: 324 QMGNGCILGGKPIKCSWG 341
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 31/198 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +L+E F++ S +G K++ YGFV + +
Sbjct: 57 DASTCRSVYVGNIHVHVTEAVLREVFQST-GSVEGCKLI----RKEKSSYGFVDYYERGS 111
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ ++NG +P+R+ N SGQ+ +D ++ +FVG
Sbjct: 112 AALAILQLNGRQIFGQPIRV----NWAYASGQR---------------EDTTDHFNIFVG 152
Query: 289 NLDSIVTDEHLRELFSQYGQ-------LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 341
+L + VTD L FS Y + K + GFV F ++ A+ A+ LNG
Sbjct: 153 DLSAEVTDSALFAFFSGYSSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQ 212
Query: 342 QLGGQNIRLSWGRSPSNK 359
LG + IR +W +N
Sbjct: 213 WLGNRQIRCNWATKGANS 230
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 335
D +V+VGN+ VT+ LRE+F G + K+ ++ GFV + +R A A+
Sbjct: 57 DASTCRSVYVGNIHVHVTEAVLREVFQSTGSVEGCKLIRKEKSSYGFVDYYERGSAALAI 116
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQAQPD 364
LNG Q+ GQ IR++W + ++ D
Sbjct: 117 LQLNGRQIFGQPIRVNWAYASGQREDTTD 145
>gi|361127946|gb|EHK99901.1| putative Nucleolysin TIA-1 [Glarea lozoyensis 74030]
Length = 505
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 167/360 (46%), Gaps = 45/360 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTG---QIEG--YGFIEFISRAGA 136
R L++G L + E L F TG V VK+I +K G Q +G YGF+E+ A
Sbjct: 87 RALYVGGLDPRVTEDVLRQIFETTGHVQHVKIIPDKNVGAEQQAKGFNYGFVEYDDPGAA 146
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFR 195
ER +QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F
Sbjct: 147 ERAMQTLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFS 204
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
A + S A+V+ D TGR++GYGFV F + + +A++ M+G + +R +R A K
Sbjct: 205 A-FGSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKG 263
Query: 256 --TVSGQQQ----------------YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 297
++S QQQ +P Q+ + TT +VGNL T
Sbjct: 264 QPSISQQQQMSAMGMTPTTPFGHHHFPTHGVQSFDMIVQQTPAWQTTCYVGNLTPYTTQN 323
Query: 298 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
L LF +G +V + A + FV+ A A+ L+G + G+ ++ SWG+ +
Sbjct: 324 DLIPLFQNFGFVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDKA 383
Query: 358 NKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG-----YPGYGNYQQPQQPQ 412
Q G+ QG GY+ Q P Y G +P YG QP PQ
Sbjct: 384 PTQD------------GFPQGTPT-GYSPQGGQTPGGYGSGAQSAYFPQYGGMPQPAGPQ 430
>gi|389639074|ref|XP_003717170.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|351642989|gb|EHA50851.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|440475727|gb|ELQ44390.1| nucleolysin TIA-1 [Magnaporthe oryzae Y34]
gi|440486439|gb|ELQ66302.1| nucleolysin TIA-1 [Magnaporthe oryzae P131]
Length = 479
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 28/387 (7%)
Query: 4 PAPGAVPPPPPPMAAHQYQYQQQAPPQQQP-PPQPSPYMMMMPPQPQAQPPAMWATQAAA 62
PAPG PPPP A + Q P P P P P A M +A
Sbjct: 7 PAPGTQLPPPPQANAGAPGFDNPQNGQSGPMAPPPLHIPQNTNPIPTAITSPMGGGDQSA 66
Query: 63 PQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI 122
+ G + +P + R L++G L + E L F TG V VK+I +K +
Sbjct: 67 LMSPGGTFTRRTAPEPNK-RALYVGGLDARVTEDVLRQIFETTGHVQNVKIIPDKNA-KG 124
Query: 123 EGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDTPDH-TIFVGD 180
YGF+E+ A+R +QT NG + E R+NWA A ++DT +H IFVGD
Sbjct: 125 YNYGFVEYDDPGAADRAMQTLNGRRVHQSE--IRVNWAYQAATSATKEDTSNHFHIFVGD 182
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L+ +V D +L + F + S A+V+ D TGR++GYGFV F D S+ +A++ M+G +
Sbjct: 183 LSNEVNDEVLTQAFSV-FGSVSEARVMWDMKTGRSRGYGFVAFRDRSDAEKALSSMDGEW 241
Query: 241 CSTRPMRIGPATNK------------------KTVSGQQQYPKASYQNSQVAQSDDDPNN 282
+R +R A K T G +P Q+ ++ +
Sbjct: 242 LGSRAIRCNWANQKGQPSIAQQQAMSAVGMTPTTPFGHHHFPTHGMQSYEMVVNQTPAYQ 301
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ 342
TT +VGNL T + LF +G +V + A + F++ A +A+ LNG
Sbjct: 302 TTCYVGNLTPYTTANDVVPLFQNFGYVVESRFQADRGFAFIKMDSHENAAQAICGLNGYN 361
Query: 343 LGGQNIRLSWG--RSPSNKQAQPDPNQ 367
+ G+ ++ SWG ++ +N Q DP+Q
Sbjct: 362 VNGRPLKCSWGKDKNSTNPQGNFDPSQ 388
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 151/281 (53%), Gaps = 15/281 (5%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V +VK+I RN G + YGF+E+ AE LQ
Sbjct: 17 LYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDRNFSHGGLN-YGFVEYTDMRAAETALQ 75
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G ++ D T +FVGDL+ +V D +L + F + S
Sbjct: 76 TLNGRKIFDTE--IRVNWAYQGNNKQEDTTNHFHVFVGDLSPEVNDEILSKAFSG-FKSI 132
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D TG+++GYGF+ F ++++ +A++ MNG + +R +R+ A N+KT +G
Sbjct: 133 SDARVMWDMNTGKSRGYGFLSFREKTDAEQAISTMNGEWLGSRAIRVNWA-NQKTQTGSH 191
Query: 262 QY----PKASYQN---SQVAQSDDDPN-NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+ P + N S A P NTTV++GNL T L +F +G ++ V+
Sbjct: 192 RLNDLMPTMNAFNGPLSYEAVFQQTPAYNTTVYIGNLTPYTTQADLVPIFQAFGYIIEVR 251
Query: 314 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ A + FV+ A A+ L GT + G+ I+ SWGR
Sbjct: 252 MQADRGFAFVKLDSHENASMAIVQLQGTLIQGRPIKCSWGR 292
>gi|448107329|ref|XP_004205333.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
gi|448110297|ref|XP_004201597.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
gi|359382388|emb|CCE81225.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
gi|359383153|emb|CCE80460.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
Length = 460
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 156/317 (49%), Gaps = 28/317 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQT-----GQIEGYGFIEFISRAGAE 137
LW+GDL+ DE + + GE +VK+I++K T + GY F+ F
Sbjct: 78 LWMGDLEPSWDEKTIKKIWQSFGESPTSVKIIKDKFTSGNNKARNVGYCFVSFPDSNTVA 137
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP-----------DHTIFVGDLAADVT 186
LQ NG +P + +LNWAS ++D+ D++IFVGDL DV+
Sbjct: 138 SALQK-NGLQIPGSTKTLKLNWASGSNSLQQDNAKQGGRFSSKSQNDYSIFVGDLGMDVS 196
Query: 187 DYMLQETFRARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+ +L E+F YP K K++ID +T +KG+GFV+F Q +A+TEMNG +R
Sbjct: 197 ETLLFESFNRNYPGQIKQVKIMIDPVTKLSKGFGFVKFASPHSQQKALTEMNGYQVGSRS 256
Query: 246 MRIGPATNKKTVSGQQQYP---KASYQNSQVAQ------SDDDPNNTTVFVGNLDSIVTD 296
+R+G A+ Q++ P S Q+ Q DP NTT+ V L + T
Sbjct: 257 IRVGMASGSNMSINQEKSPYPDGVSASQIQIPQYQPPLNHITDPENTTLRVDGLPANFTP 316
Query: 297 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 356
+ L F +G +VH I G ++F R+ AE+A+ +G L G ++++WG++
Sbjct: 317 DDLALHFINFGNIVHCHISPDHSFGLIKFLVRTDAEKAMLYAHGAILDGCRVKVTWGKND 376
Query: 357 SNKQAQPDPNQWNAGYY 373
++ Q + Q +Y
Sbjct: 377 TDSQDATNTTQNTTKHY 393
>gi|310798412|gb|EFQ33305.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 482
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 147/310 (47%), Gaps = 28/310 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K + YGF+E+ AER +Q
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNA-KGYNYGFVEYDDPGAAERAMQ 145
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 146 TLNGRRVHQSE--IRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSA-FGS 202
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K
Sbjct: 203 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 262
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G Q+P + +V + TT +VGNL T + L
Sbjct: 263 QQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPL 322
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
F +G +V + A + F++ A A+ +NG + G+ ++ SWG K
Sbjct: 323 FQNFGYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWG-----KDKT 377
Query: 363 PDPNQWNAGY 372
P+P AG+
Sbjct: 378 PNPQGGAAGF 387
>gi|380478106|emb|CCF43782.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 482
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 146/310 (47%), Gaps = 28/310 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K YGF+E+ AER +Q
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYN-YGFVEYDDPGAAERAMQ 145
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 146 TLNGRRVHQSE--IRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSA-FGS 202
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K
Sbjct: 203 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 262
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G Q+P + +V + TT +VGNL T + L
Sbjct: 263 QQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPL 322
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
F +G +V + A + F++ A A+ +NG + G+ ++ SWG K
Sbjct: 323 FQNFGYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWG-----KDKT 377
Query: 363 PDPNQWNAGY 372
P+P AG+
Sbjct: 378 PNPQGGAAGF 387
>gi|224081280|ref|XP_002188811.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Taeniopygia
guttata]
Length = 281
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 116/173 (67%), Gaps = 7/173 (4%)
Query: 86 IGDLQYWMDETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
+G+L+ +MDE +++ FA GE+V +VK+IRN+ TG GY F+EF A AE+ L N
Sbjct: 1 MGELEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKIN 60
Query: 145 GTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
G P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +
Sbjct: 61 GKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCR 118
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
G KVV+D+ G +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K
Sbjct: 119 GGKVVLDQ-AGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 170
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 190 LQETFRARYPSTKG-----AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+ E F +R +T G K++ +RLTG GY FV F D + + + ++NG +
Sbjct: 8 MDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----K 62
Query: 245 PMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
P+ G K+ Y K Q D+ P ++FVG+L V D L E F
Sbjct: 63 PLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDVDDGMLYEFFV 111
Query: 305 QY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 357
+ G++V + K GFV+F D + AL G LG + +RLS +
Sbjct: 112 KVYPSCRGGKVVLDQAGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKA 171
Query: 358 NK 359
N+
Sbjct: 172 NR 173
>gi|367051094|ref|XP_003655926.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
gi|347003190|gb|AEO69590.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
Length = 500
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 148/306 (48%), Gaps = 24/306 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V +VK+I +K + YGF+E+ AER +Q
Sbjct: 90 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNA-RGYNYGFVEYDDPGAAERAMQ 148
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 149 TLNGRRVHQSE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 205
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K
Sbjct: 206 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 265
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P + + + TT +VGNL T + L
Sbjct: 266 QQQAMQQMGLTPTTPYGHHHFPTHGIHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDIVPL 325
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+ + Q
Sbjct: 326 FQNFGFVVESRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDKTPAHHQ 385
Query: 363 P-DPNQ 367
P DPNQ
Sbjct: 386 PFDPNQ 391
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 176/375 (46%), Gaps = 35/375 (9%)
Query: 9 VPPPPPPMAA---HQYQYQQ---QAPPQQQPPPQPSPYMMM--MPPQPQAQPPAMWATQA 60
+PPPP AA QY Q QA P PPP P ++ P P A M +
Sbjct: 13 LPPPPQTSAAAPNQQYDASQGNGQANPSHMPPPXRPPVVIPQNTNPIPTAITSPM-SGNM 71
Query: 61 AAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQ 118
+P +AG V ++ R L++G L + E L F TG VV+VK+I +NK
Sbjct: 72 MSPTSAGGFV--RRAAPEPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKF 129
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIF 177
+ YGF+EF AER +QT NG + E R+NWA ++DT +H IF
Sbjct: 130 NSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIF 187
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ +V D +L + F A + S A+V+ D TGR++GYGFV F + S+ +A++ M+
Sbjct: 188 VGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMD 246
Query: 238 GVFCSTRPMRIGPATNK------------------KTVSGQQQYPKASYQNSQVAQSDDD 279
G + +R +R A K T G +P Q+ +
Sbjct: 247 GEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTP 306
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 339
TT +VGNL T L LF +G ++ ++ A + F++ A A+ LN
Sbjct: 307 QWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADRGFAFIKMDTHENAAMAICQLN 366
Query: 340 GTQLGGQNIRLSWGR 354
G + G+ ++ SWG+
Sbjct: 367 GYNVNGRPLKCSWGK 381
>gi|254572874|ref|XP_002493546.1| RNA binding protein, component of the U1 snRNP protein
[Komagataella pastoris GS115]
gi|238033345|emb|CAY71367.1| RNA binding protein, component of the U1 snRNP protein
[Komagataella pastoris GS115]
gi|328354629|emb|CCA41026.1| Protein NAM8 [Komagataella pastoris CBS 7435]
Length = 378
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 158/321 (49%), Gaps = 49/321 (15%)
Query: 84 LWIGDLQ-YWMDET----YLNTCFAHTGEVVAVKVIRNK-----QTGQIEGYGFIEFISR 133
+W+GDL W ++T +L+ + + ++ +++VI++K + GY F+ F
Sbjct: 22 VWMGDLLPSWEEDTIRQIWLSVDPSLSEKIHSIRVIKDKTPNLAKLNNNPGYCFLRFTDY 81
Query: 134 AGAERVLQTFNGTPMPN-GEQNFRLNWAS------------FGAGEKRDDTPDHTIFVGD 180
A ++ + G P+PN ++ F+LNWAS + + T +++IFVGD
Sbjct: 82 DTANELITNYQGKPIPNHKDKFFKLNWASSHTQNQQQQQGYQNTQDSSNRTQENSIFVGD 141
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
LA VTD ML + F+ YPS A+++ID TG+T+G+GFV+F D E +A+ EM G
Sbjct: 142 LAQGVTDTMLLDAFKKNYPSAFSARIMIDSQTGKTRGFGFVKFRDIQELNKALIEMQGFV 201
Query: 241 CSTRPMRIGPATNKKTVSGQQQYPKASYQ----------------NSQVA---------Q 275
+ RP+R+ A + + Q ++ Q N V
Sbjct: 202 LNGRPIRVSTAGRSTSNTNGGQLKQSVQQSSTAPSSSGSQSYGFGNRLVIPPLPLAPPLN 261
Query: 276 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEAL 335
DPNNT + V N+D + + L E F +G++V K K V +ADR AE A+
Sbjct: 262 PASDPNNTALSVTNIDELTEQKELWEYFQPFGKIVLFK-QTSKESAIVVYADRLGAELAV 320
Query: 336 RMLNGTQLGGQNIRLSWGRSP 356
R +NG Q+G I + WG SP
Sbjct: 321 REMNGCQVGFSRIVVKWGESP 341
>gi|260829407|ref|XP_002609653.1| hypothetical protein BRAFLDRAFT_123569 [Branchiostoma floridae]
gi|229295015|gb|EEN65663.1| hypothetical protein BRAFLDRAFT_123569 [Branchiostoma floridae]
Length = 297
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 116/176 (65%), Gaps = 7/176 (3%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +LW+GDL+ +MDE ++ FA GE +++VK+I+N+QTG G+ F++F + AER
Sbjct: 1 MTSLWMGDLEPYMDEPFIMNAFASMGEPIISVKLIKNRQTGGPAGFCFVDFGDQQLAERA 60
Query: 140 LQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
L +G +P + F+LN+AS+G + TP+++IFVGDL ++ D LQE F R
Sbjct: 61 LTRLSGKQLPGSYTPKRFKLNYASYG--RENVVTPEYSIFVGDLTPEIDDGSLQEFFGRR 118
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPAT 252
Y S K AKVV+D G ++GYGFVRF DE+EQ RA+TEM G V + +R+ PAT
Sbjct: 119 YSSCKAAKVVLD-AAGNSRGYGFVRFTDENEQKRALTEMQGAVGLGGKALRVSPAT 173
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 27/186 (14%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +R TG G+ FV FGD+ RA+T
Sbjct: 3 SLWMGDLEPYMDEPFIMNAFASMGEPIISVKLIKNRQTGGPAGFCFVDFGDQQLAERALT 62
Query: 235 EMNG--VFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDS 292
++G + S P R + ASY V + ++FVG+L
Sbjct: 63 RLSGKQLPGSYTPKRF-------------KLNYASYGRENVVTPE-----YSIFVGDLTP 104
Query: 293 IVTDEHLRELFS-QYGQLVHVKI---PAG--KRCGFVQFADRSCAEEALRMLNG-TQLGG 345
+ D L+E F +Y K+ AG + GFV+F D + + AL + G LGG
Sbjct: 105 EIDDGSLQEFFGRRYSSCKAAKVVLDAAGNSRGYGFVRFTDENEQKRALTEMQGAVGLGG 164
Query: 346 QNIRLS 351
+ +R+S
Sbjct: 165 KALRVS 170
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 176/375 (46%), Gaps = 35/375 (9%)
Query: 9 VPPPPPPMAA---HQYQYQQ---QAPPQQQPPPQPSPYMMM--MPPQPQAQPPAMWATQA 60
+PPPP AA QY Q QA P PPP P ++ P P A M +
Sbjct: 13 LPPPPQTSAAAPNQQYDASQGNGQANPSHMPPPXRPPVVIPQNTNPIPTAITSPM-SGNM 71
Query: 61 AAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQ 118
+P +AG V ++ R L++G L + E L F TG VV+VK+I +NK
Sbjct: 72 MSPTSAGGFV--RRAAPEPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKF 129
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIF 177
+ YGF+EF AER +QT NG + E R+NWA ++DT +H IF
Sbjct: 130 NSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIF 187
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ +V D +L + F A + S A+V+ D TGR++GYGFV F + S+ +A++ M+
Sbjct: 188 VGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMD 246
Query: 238 GVFCSTRPMRIGPATNK------------------KTVSGQQQYPKASYQNSQVAQSDDD 279
G + +R +R A K T G +P Q+ +
Sbjct: 247 GEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTP 306
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 339
TT +VGNL T L LF +G ++ ++ A + F++ A A+ LN
Sbjct: 307 QWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADRGFAFIKMDTHENAAMAICQLN 366
Query: 340 GTQLGGQNIRLSWGR 354
G + G+ ++ SWG+
Sbjct: 367 GYNVNGRPLKCSWGK 381
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 176/375 (46%), Gaps = 35/375 (9%)
Query: 9 VPPPPPPMAA---HQYQYQQ---QAPPQQQPPPQPSPYMMM--MPPQPQAQPPAMWATQA 60
+PPPP AA QY Q QA P PPP P ++ P P A M +
Sbjct: 13 LPPPPQTSAAAPNQQYDASQGNGQANPSHMPPPPRPPVVIPQNTNPIPTAITSPM-SGNM 71
Query: 61 AAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQ 118
+P +AG V ++ R L++G L + E L F TG VV+VK+I +NK
Sbjct: 72 MSPTSAGGFV--RRAAPEPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKF 129
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIF 177
+ YGF+EF AER +QT NG + E R+NWA ++DT +H IF
Sbjct: 130 NSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIF 187
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ +V D +L + F A + S A+V+ D TGR++GYGFV F + S+ +A++ M+
Sbjct: 188 VGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMD 246
Query: 238 GVFCSTRPMRIGPATNK------------------KTVSGQQQYPKASYQNSQVAQSDDD 279
G + +R +R A K T G +P Q+ +
Sbjct: 247 GEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTP 306
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 339
TT +VGNL T L LF +G ++ ++ A + F++ A A+ LN
Sbjct: 307 QWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADRGFAFIKMDTHENAAMAICQLN 366
Query: 340 GTQLGGQNIRLSWGR 354
G + G+ ++ SWG+
Sbjct: 367 GYNVNGRPLKCSWGK 381
>gi|431891176|gb|ELK02053.1| tRNA selenocysteine 1-associated protein 1 [Pteropus alecto]
Length = 270
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 115/172 (66%), Gaps = 7/172 (4%)
Query: 89 LQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP 147
L+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L NG P
Sbjct: 18 LEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 77
Query: 148 MPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAK 205
+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +G K
Sbjct: 78 LPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGK 135
Query: 206 VVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
VV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 136 VVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 186
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 28/174 (16%)
Query: 190 LQETFRARYPSTKG-----AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+ E F +R +T G K++ +RLTG GY FV F D + + + ++NG +
Sbjct: 22 MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----K 76
Query: 245 PMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
P+ G K+ Y K Q D+ P ++FVG+L V D L E F
Sbjct: 77 PLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDVDDGMLYEFFV 125
Query: 305 QY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 351
+ G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 126 KVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 179
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 146/305 (47%), Gaps = 23/305 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K + YGF+E+ A AER +Q
Sbjct: 89 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNSKGFN-YGFVEYDDPAAAERAMQ 147
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 148 TLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 204
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F + + +A++ M+G + +R +R A K
Sbjct: 205 VSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 264
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P Q+ + TTV+VGNL T L L
Sbjct: 265 QQQAMSAMGMTSTTPFGHHHFPTHGVQSYDMIVQQTPAWQTTVYVGNLTPYTTQNDLIPL 324
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
F +G +V + A + FV+ A A+ L+G + G+ ++ SWG+ + Q
Sbjct: 325 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDKAPGQPG 384
Query: 363 PDPNQ 367
D +Q
Sbjct: 385 ADGSQ 389
>gi|344245053|gb|EGW01157.1| tRNA selenocysteine 1-associated protein 1 [Cricetulus griseus]
Length = 283
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 115/172 (66%), Gaps = 7/172 (4%)
Query: 89 LQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP 147
L+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L NG P
Sbjct: 6 LEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 65
Query: 148 MPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAK 205
+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +G K
Sbjct: 66 LPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGK 123
Query: 206 VVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
VV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 124 VVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 174
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 28/174 (16%)
Query: 190 LQETFRARYPSTKG-----AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+ E F +R +T G K++ +RLTG GY FV F D + + + ++NG +
Sbjct: 10 MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----K 64
Query: 245 PMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
P+ G K+ Y K Q D+ P ++FVG+L V D L E F
Sbjct: 65 PLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDVDDGMLYEFFV 113
Query: 305 QY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 351
+ G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 KVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 167
>gi|452845910|gb|EME47843.1| hypothetical protein DOTSEDRAFT_167231 [Dothistroma septosporum
NZE10]
Length = 500
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 174/371 (46%), Gaps = 33/371 (8%)
Query: 8 AVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAA---APQ 64
++PP P +A Q +Q + PPP PS + +P P A+ + +P
Sbjct: 11 SLPPLPAGVAPGQTSFQNGSQGHMPPPPVPS---LTIPQNNNPAPTAVGEVDLSGILSPT 67
Query: 65 AAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG 124
+AG V ++ R L++G L + E L F TG V VK+I +K Q +G
Sbjct: 68 SAGGHV--RRAAPEPNKRALYVGGLDPRVTEDVLKQIFETTGHVQNVKIIPDKNF-QSKG 124
Query: 125 Y--GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDL 181
Y GF+E+ AER +QT NG + +Q R+NWA ++DT +H IFVGDL
Sbjct: 125 YNYGFVEYDDPGAAERAMQTLNGRRV--HQQEIRVNWAYQSNTNTKEDTSNHFHIFVGDL 182
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ +V D +L + F A + + A+V+ D TGR++GYGFV + D E +A++ M+G +
Sbjct: 183 SNEVNDEVLLQAFSA-FGTVSEARVMWDMKTGRSRGYGFVAYRDRGEAEKALSSMDGEWL 241
Query: 242 STRPMRIGPATNK------------------KTVSGQQQYPKASYQNSQVAQSDDDPNNT 283
+R +R A K T G +P Q+ ++ + T
Sbjct: 242 GSRAIRCNWANQKGQPSFSQQQAMAQMGMTPTTPYGHHTFPTQGSQSYEMVVNQTPQWQT 301
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQL 343
T +VGNL T L LF +G + + + + FV+ A A+ L+G +
Sbjct: 302 TCYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSDRGFAFVKMDTHENAANAICQLSGYNV 361
Query: 344 GGQNIRLSWGR 354
G+ ++ SWG+
Sbjct: 362 NGRPLKCSWGK 372
>gi|296423176|ref|XP_002841131.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637365|emb|CAZ85322.1| unnamed protein product [Tuber melanosporum]
Length = 498
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 159/351 (45%), Gaps = 42/351 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K + YGFIE+ AER +Q
Sbjct: 86 RALYVGGLDPRVTEEILKQIFETTGHVQNVKIIPDKNSKGYN-YGFIEYDDPGAAERAMQ 144
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F + + S
Sbjct: 145 TLNGRRIHQAE--IRVNWAYQSNQSSKEDTTNHFHIFVGDLSNEVNDEVLMQAF-STFGS 201
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F D ++ +A++ M+G + +R +R A K
Sbjct: 202 VSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 261
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P Q+ + TT +VGNL T L L
Sbjct: 262 QQAAMAAMGMTPTTPYGHHNFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQNDLVPL 321
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG--RSPSNKQ 360
F +G +V + A + FV+ A A+ L+G + G+ ++ SWG R P+ +
Sbjct: 322 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTGQF 381
Query: 361 AQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQP 411
P Q N Y PQ PS Y +P YG PQ P
Sbjct: 382 DAYSPQQPNTPQY--------------PPQTPSAY---FPQYGGPMTPQGP 415
>gi|171687054|ref|XP_001908468.1| hypothetical protein [Podospora anserina S mat+]
gi|170943488|emb|CAP69141.1| unnamed protein product [Podospora anserina S mat+]
Length = 481
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 162/358 (45%), Gaps = 44/358 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K YGF+E+ AER +Q
Sbjct: 88 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYN-YGFVEYDDPGSAERAMQ 146
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 147 TLNGRRVHQAE--IRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 203
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F D E +A++ M+G + +R +R A K
Sbjct: 204 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 263
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P + + + TT +VGNL T L L
Sbjct: 264 QQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDLVPL 323
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
F +G +V + A + F++ A A+ LNG + G+ ++ S +P +QAQ
Sbjct: 324 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCS---TPQAQQAQ 380
Query: 363 PDPNQWNA-------GYYGYAQGYEN-YG----------YAAAAPQDPSMYYGGYPGY 402
DPNQ + Y G Y N YG Y A Q P+ Y GG GY
Sbjct: 381 FDPNQAYSPQSAQTPAYPGTPSTYFNQYGGNFGPGQQAAYTGAQAQSPAAYGGGPMGY 438
>gi|367026720|ref|XP_003662644.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
gi|347009913|gb|AEO57399.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
Length = 500
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 148/306 (48%), Gaps = 24/306 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V +VK+I +K + YGF+E+ AER +Q
Sbjct: 90 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNA-KGYNYGFVEYDDPGAAERAMQ 148
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 149 TLNGRRVHQSE--IRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLFQAFSA-FGS 205
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K
Sbjct: 206 ISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 265
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P + + + TT +VGNL T + L
Sbjct: 266 QQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMVVNQTPAWQTTCYVGNLTPYTTQTDIVPL 325
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS-NKQA 361
F +G +V + A + F++ A A+ LNG + G+ ++ SWG+ + N
Sbjct: 326 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDKTPNHHQ 385
Query: 362 QPDPNQ 367
Q DP+Q
Sbjct: 386 QFDPHQ 391
>gi|346319566|gb|EGX89167.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cordyceps militaris CM01]
Length = 450
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 142/299 (47%), Gaps = 23/299 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K YGF+E+ AER +Q
Sbjct: 70 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFN-YGFVEYDDPGAAERAMQ 128
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT H IFVGDL+ +V D +L + F A + S
Sbjct: 129 TLNGRRVHQSE--IRVNWAYQSNTSGKEDTSGHFHIFVGDLSNEVNDEILTQAFSA-FGS 185
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F D E +A++ M+G + +R +R A K
Sbjct: 186 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 245
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G Q+P + V + TTV+VGNL T + L
Sbjct: 246 QQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQTPTWQTTVYVGNLTPYTTPNDVVPL 305
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
F +G +V + A + F++ A A+ +NG + G+ ++ SWG+ ++ Q
Sbjct: 306 FQNFGFVVESRFQADRGFAFIKMDTHENASMAICQMNGYNVNGRPLKCSWGKDKTSNQG 364
>gi|345571041|gb|EGX53856.1| hypothetical protein AOL_s00004g515 [Arthrobotrys oligospora ATCC
24927]
Length = 496
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 173/381 (45%), Gaps = 46/381 (12%)
Query: 58 TQAAAPQAAGVAVPPQQQG-------QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVA 110
T +P +A V P G +P + R L++G L + + L F TG VV+
Sbjct: 48 TAITSPMSASVTSPTSAGGFVRRAAPEPNK-RALYVGGLDPRVTDDILRQIFETTGHVVS 106
Query: 111 VKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD 170
VK+I +K YGF+E+ AER +QT NG + E R+NWA + ++D
Sbjct: 107 VKIIPDKNAKGFN-YGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSSQAAKED 163
Query: 171 TPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
T H IFVGDL+ +V D +LQ+ F + + A+V+ D TGR++GYGFV + + S+
Sbjct: 164 TSHHFHIFVGDLSNEVNDELLQQAFTT-FGTISEARVMWDMKTGRSRGYGFVAYRERSDA 222
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNK------------------KTVSGQQQYPKASYQNS 271
+A++ M+G + +R +R A K T G +P Q+
Sbjct: 223 EKALSAMDGEWLGSRAIRCNWANQKGQPSISQQSQMAQMGMTPTTPFGHHHFPTHGIQSY 282
Query: 272 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 331
+ TTV+VGNL T L LF +G +V + A + F++ A
Sbjct: 283 DMIVQQTPQWQTTVYVGNLTPYTTQNDLLPLFQNFGYIVETRFQADRGFAFIKMDTHENA 342
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQD 391
A+ L+G + G+ ++ SWG+ +P Q++ GY G PQ
Sbjct: 343 AMAICQLSGYNVNGRPLKCSWGKD------RPPTGQFD--------GYSPQG-GPQTPQF 387
Query: 392 PSMYYGGYPGYGNYQQPQQPQ 412
P+ + +P YG P PQ
Sbjct: 388 PNSPFSNFPQYGGPGGPMSPQ 408
>gi|410924257|ref|XP_003975598.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Takifugu rubripes]
Length = 340
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 128/210 (60%), Gaps = 8/210 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL +M+E ++ F+ GE VK+I +K TG GY F+E A ER +Q
Sbjct: 7 SLWMGDLDPYMEEDFIKQAFSAMGESPTGVKIITHKITGGSAGYCFVELADEASVERCVQ 66
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +P + F+LN+A++G ++ + P+ ++FVGDLA+DV D+ LQ+ F+ YP
Sbjct: 67 RLNGKLVPGSNPPRKFKLNYATYG--KRPEAGPEFSVFVGDLASDVQDFQLQQVFK-NYP 123
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-KTVS 258
S KGAKVV D+ G ++GYGFV+FG+ESEQ +A+ E G S +P+R+ A K + +S
Sbjct: 124 SCKGAKVVTDQY-GYSRGYGFVKFGEESEQKKAIEECQGTMLSGKPLRLSVAVAKSQKIS 182
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
Q +Y + +QS+ +N +V G
Sbjct: 183 SYQGGQGQNYSSYNQSQSNYYGSNNSVAQG 212
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 31/240 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + +++ F A S G K++ ++TG + GY FV DE+ R +
Sbjct: 7 SLWMGDLDPYMEEDFIKQAFSAMGESPTGVKIITHKITGGSAGYCFVELADEASVERCVQ 66
Query: 235 EMNGVFCST----RPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNL 290
+NG R ++ AT K P+A + S VFVG+L
Sbjct: 67 RLNGKLVPGSNPPRKFKLNYATYGKR-------PEAGPEFS-------------VFVGDL 106
Query: 291 DSIVTDEHLRELFSQY-----GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
S V D L+++F Y ++V + + GFV+F + S ++A+ GT L G
Sbjct: 107 ASDVQDFQLQQVFKNYPSCKGAKVVTDQYGYSRGYGFVKFGEESEQKKAIEECQGTMLSG 166
Query: 346 QNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNY 405
+ +RLS + S K + Q Y Y Q NY Y + YY + GY Y
Sbjct: 167 KPLRLSVAVAKSQKISSYQGGQ-GQNYSSYNQSQSNY-YGSNNSVAQGGYYSQWGGYDQY 224
>gi|325089595|gb|EGC42905.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus H88]
Length = 492
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 140/292 (47%), Gaps = 23/292 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L+IG L + E L F TG V +VK+I +K + + YGF+E+ AER +
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLN-YGFVEYDDPGAAERAMS 150
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 151 TLNGRRVHQSE--IRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 207
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F + + +A++ M+G + +R +R A K
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P Q+ + + TT +VGNL T L L
Sbjct: 268 QQQAMAAMGMTPSTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPL 327
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
F +G +V + + FV+ A A+ L+G + G+ ++ SWGR
Sbjct: 328 FQNFGYVVETRFQTDRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGR 379
>gi|452986364|gb|EME86120.1| hypothetical protein MYCFIDRAFT_52503 [Pseudocercospora fijiensis
CIRAD86]
Length = 482
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 162/347 (46%), Gaps = 38/347 (10%)
Query: 34 PPQPSPYMMMMPPQ-----PQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGD 88
PP P P + + PQ PQ+ M T A Q A P + R L++G
Sbjct: 36 PPPPVPSLAVNIPQNTNPLPQSMSGLMSPTSAGG-QVRRAAPEPNK-------RALYVGG 87
Query: 89 LQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY--GFIEFISRAGAERVLQTFNGT 146
L + E L F TG V +VK+I +K Q +GY GF+E+ AER +QT NG
Sbjct: 88 LDPRVTEDVLKQIFETTGHVQSVKIIPDKNF-QSKGYNYGFVEYDDPGAAERAMQTLNGR 146
Query: 147 PMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAK 205
+ +Q R+NWA ++DT +H IFVGDL+ +V D +L + F A + + A+
Sbjct: 147 RV--HQQEIRVNWAYQSNTATKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGNVSEAR 203
Query: 206 VVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----------- 254
V+ D TGR++GYGFV F D E +A++ M+G + +R +R A K
Sbjct: 204 VMWDMKTGRSRGYGFVAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAM 263
Query: 255 -------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 307
T G +P Q+ + S TT +VGNL T L LF +G
Sbjct: 264 AQMGMTPTTPYGHHSFPTQGPQSYETIVSQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFG 323
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ + + + F++ A A+ L+G Q+ G+ ++ SWG+
Sbjct: 324 YVTETRFQSDRGFAFIKMDSHENAANAICHLSGYQVNGRPLKCSWGK 370
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 152/282 (53%), Gaps = 19/282 (6%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E RTL++G+L + E ++ T F G V KVI + G + Y F+EF A +
Sbjct: 40 EPRTLYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHD---GANDPYAFVEFSDHGQASQA 96
Query: 140 LQTFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRAR 197
LQT N + + E ++NWA G + DT H +FVGDL+++V + L+E F
Sbjct: 97 LQTMNKRLLHDRE--MKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAF-IP 153
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K
Sbjct: 154 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK--- 210
Query: 258 SGQQQ----YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
G Q+ Y + SY S D NT+V+VGN+ ++ DE +R+ F+ YG++ V+
Sbjct: 211 PGDQEKPSNYNEKSYDEVYNQTSGD---NTSVYVGNIANLTEDE-IRQAFASYGRISEVR 266
Query: 314 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
I + FV+F +++ A +A+ +N +GGQ +R SWG++
Sbjct: 267 IFKMQGYAFVKFENKNAAAKAITEMNNQDVGGQMVRCSWGKT 308
>gi|296815788|ref|XP_002848231.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
gi|238841256|gb|EEQ30918.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
Length = 507
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 142/294 (48%), Gaps = 25/294 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG--YGFIEFISRAGAERV 139
R L++G L + E L F TG V +VK+I +K Q +G YGFIE+ AER
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNF-QSKGLNYGFIEYDDPGAAERA 160
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A
Sbjct: 161 MQTLNGRRVHQSE--IRVNWAYQSNTASKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-C 217
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---- 254
S A+V+ D TGR++GYGFV F D ++ +A++ M+G + +R +R A K
Sbjct: 218 GSVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPS 277
Query: 255 --------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
T G +P Q+ + TT +VGNL T L
Sbjct: 278 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLI 337
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 338 PLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 391
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 175/374 (46%), Gaps = 34/374 (9%)
Query: 9 VPPPPPPMAA---HQYQYQQ---QAPPQQQPPPQPSPYMMM--MPPQPQAQPPAMWATQA 60
+PPPP AA QY Q QA P PPP P ++ P P A M +
Sbjct: 13 LPPPPQTSAAAPNQQYDASQGNGQANPSHMPPPPRPPVVIPQNTNPIPTAITSPM-SGNM 71
Query: 61 AAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ-T 119
+P +AG V ++ R L++G L + E L F TG VV+VK+I +K
Sbjct: 72 MSPTSAGGFV--RRAAPEPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFN 129
Query: 120 GQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFV 178
+ YGF+EF AER +QT NG + E R+NWA ++DT +H IFV
Sbjct: 130 SKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFV 187
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL+ +V D +L + F A + S A+V+ D TGR++GYGFV F + S+ +A++ M+G
Sbjct: 188 GDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDG 246
Query: 239 VFCSTRPMRIGPATNK------------------KTVSGQQQYPKASYQNSQVAQSDDDP 280
+ +R +R A K T G +P Q+ +
Sbjct: 247 EWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQ 306
Query: 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 340
TT +VGNL T L LF +G ++ ++ A + F++ A A+ LNG
Sbjct: 307 WQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADRGFAFIKMDTHENAAMAICQLNG 366
Query: 341 TQLGGQNIRLSWGR 354
+ G+ ++ SWG+
Sbjct: 367 YNVNGRPLKCSWGK 380
>gi|400595086|gb|EJP62896.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 468
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 145/305 (47%), Gaps = 24/305 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K YGF+E+ A+R +Q
Sbjct: 68 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFN-YGFVEYDDPGAADRAMQ 126
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT H IFVGDL+ +V D +L + F A + S
Sbjct: 127 TLNGRRVHQSE--IRVNWAYQANSSGKEDTSGHFHIFVGDLSNEVNDDILTQAFSA-FGS 183
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F D E +A++ M+G + +R +R A K
Sbjct: 184 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 243
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G Q+P + V + TTV+VGNL T + L
Sbjct: 244 QQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQTPNWQTTVYVGNLTPYTTPNDVVPL 303
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
F +G +V + A + F++ A A+ +NG + G+ ++ SWG+ + Q
Sbjct: 304 FQNFGFVVESRFQADRGFAFIKMDTHENASMAICQMNGYNVNGRPLKCSWGKDKTPNQGF 363
Query: 363 PDPNQ 367
DP+Q
Sbjct: 364 -DPSQ 367
>gi|443710130|gb|ELU04461.1| hypothetical protein CAPTEDRAFT_181109 [Capitella teleta]
Length = 297
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 114/181 (62%), Gaps = 7/181 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
TLW+GDL+ +MDE +++ F GE VV+VKVI+NK TG GY F+EF + GA R +
Sbjct: 8 TLWMGDLEPYMDEAFISNAFHTMGEGVVSVKVIKNKHTGMPTGYCFVEFPDQEGAHRAML 67
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+ NG +P + F+LN ASF G + + P+ ++FVGDL DV D +L F Y
Sbjct: 68 SLNGKIVPGSMPYKRFKLNHASF--GREHLNVPEFSLFVGDLTEDVDDLILYSHFHTHYK 125
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTRPMRIGPATNKKTVS 258
+ +GAKVV+D G+++GYGFVRF E +Q +A+ EM + +P+R+ AT KKT +
Sbjct: 126 NLRGAKVVVDE-NGKSRGYGFVRFTCEKDQQKALVEMQHYTGIGRKPIRVSLATPKKTQA 184
Query: 259 G 259
G
Sbjct: 185 G 185
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 33/248 (13%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + + + F KV+ ++ TG GY FV F D+ RAM
Sbjct: 8 TLWMGDLEPYMDEAFISNAFHTMGEGVVSVKVIKNKHTGMPTGYCFVEFPDQEGAHRAML 67
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
+NG K V G Y + ++ + + ++FVG+L V
Sbjct: 68 SLNG----------------KIVPGSMPYKRFKLNHASFGREHLNVPEFSLFVGDLTEDV 111
Query: 295 TDEHLRELF-SQYGQLVHVKIPAGKR-----CGFVQFADRSCAEEAL-RMLNGTQLGGQN 347
D L F + Y L K+ + GFV+F ++AL M + T +G +
Sbjct: 112 DDLILYSHFHTHYKNLRGAKVVVDENGKSRGYGFVRFTCEKDQQKALVEMQHYTGIGRKP 171
Query: 348 IRLSWGRSPSNKQAQPDPNQWNA----GYYGYAQGYENYGYAAA---APQDPSMYYGGYP 400
IR+S +P QA + A GY Y G N GY A Q P YGGY
Sbjct: 172 IRVSLA-TPKKTQAGMTGGTYTASSSSGYDYYQGGAYNQGYYNNWWQAYQQPG--YGGYD 228
Query: 401 GYGNYQQP 408
Y + P
Sbjct: 229 SYMGHSDP 236
>gi|327357360|gb|EGE86217.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces dermatitidis ATCC 18188]
Length = 492
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 141/292 (48%), Gaps = 23/292 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L+IG L + E L F TG V +VK+I +K + + YGF+E+ AER +
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLN-YGFVEYDDPGAAERAMA 150
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 151 TLNGRRVHQSE--IRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 207
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F + + +A++ M+G + +R +R A K
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P Q+ + + TT +VGNL T L L
Sbjct: 268 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPL 327
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
F +G +V + A + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 328 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGK 379
>gi|121701611|ref|XP_001269070.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
gi|119397213|gb|EAW07644.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
Length = 480
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 139/294 (47%), Gaps = 24/294 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERV 139
R L++G L + E L F TG V +VKVI +NK + YGF+EF AER
Sbjct: 92 RALYVGGLDPRVTEDILKQIFETTGHVQSVKVIPDKNKFNSKGYNYGFVEFDDPGAAERA 151
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT H IFVGDL+ +V D +L + F A +
Sbjct: 152 MQTLNGRRIHQSE--IRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEILMQAFSA-F 208
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---- 254
S A+V+ D TGR++GYGFV F D + +A+ M+G + +R +R A K
Sbjct: 209 GSVSEARVMWDMKTGRSRGYGFVAFRDRGDADKALNSMDGEWLGSRAIRCNWANQKGQPS 268
Query: 255 --------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
T G +P Q+ + TT +VGNL L
Sbjct: 269 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTAQNDLV 328
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 329 PLFQNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 382
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 153/282 (54%), Gaps = 19/282 (6%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E RTL++G+L + E ++ T F G V KVI + G + Y F+EF A +
Sbjct: 44 EPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQA 100
Query: 140 LQTFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRAR 197
LQT N + + E ++NWA G + + DT H +FVGDL+++V + L+E F+
Sbjct: 101 LQTMNKRLLLDRE--MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP- 157
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K
Sbjct: 158 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK--- 214
Query: 258 SGQQQ----YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
G Q+ Y + SY S D NT+V+VGN+ S+ DE +R+ F+ +G++ V+
Sbjct: 215 PGDQEKPSHYNEKSYDEIYNQTSGD---NTSVYVGNIASLTEDE-IRQGFASFGRITEVR 270
Query: 314 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
I + FV+F ++ A +A+ +N +GGQ +R SWG++
Sbjct: 271 IFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKT 312
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 32/187 (17%)
Query: 71 PPQQQGQPGEIRT--LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P QQQ + R +++GDL +D L F G+V KVIR+ T + +GYGF+
Sbjct: 122 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 181
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------- 174
+ R AER ++ NG + G + R NWA+ G++ + P H
Sbjct: 182 SYPKREEAERAIEQMNGQWL--GRRTIRTNWATRKPGDQ--EKPSHYNEKSYDEIYNQTS 237
Query: 175 ----TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+++VG++A+ +T+ +++ F A + ++ + +GY FV+F ++
Sbjct: 238 GDNTSVYVGNIAS-LTEDEIRQGF-ASFGRITEVRIF------KMQGYAFVKFDNKDAAA 289
Query: 231 RAMTEMN 237
+A+ +MN
Sbjct: 290 KAIVQMN 296
>gi|367002926|ref|XP_003686197.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
gi|357524497|emb|CCE63763.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
Length = 608
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 165/403 (40%), Gaps = 116/403 (28%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE------------------ 123
RTLW+GDL DE + + V VK+I+ ++ I
Sbjct: 27 RTLWMGDLNPLFDELTITKIWKSLNLPVFVKLIKARKNLLISSSSTKSQHSTSNNSPESG 86
Query: 124 ---------------------------------GYGFIEFISRAGAERVL---------- 140
GY F+EF S+ L
Sbjct: 87 LSNNEDNFDLDIQRININGVNFIDPNTVQLHHAGYCFVEFESQQDVIAALSLNKAVIPNI 146
Query: 141 --QTFNGTPMPNGEQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRA 196
++ N PNG + FRLNWAS GA + TP++++F+GDL+ T+ + F+
Sbjct: 147 FSESINLYTNPNGRRTFRLNWAS-GATLQSLIPATPEYSLFIGDLSPLTTEADILSIFQK 205
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG---PATN 253
+Y S K +V+ D + G ++G+GF+RF DE E+ A+ MNGV C +R R+ P TN
Sbjct: 206 KYKSVKTVRVMTDPINGSSRGFGFIRFSDEDERKDALENMNGVMCHSRYFRLALATPRTN 265
Query: 254 KKTVSGQQQ-------------------------------------------YPKASYQN 270
K S P ++
Sbjct: 266 KFATSTNMTQVREDNDGRSNSVTNVHTSPYEQTTTNINISNKFIDKLDVNNFIPTSNNSL 325
Query: 271 SQVAQSDD----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 326
Q AQ+ D D +NTTVF+G L + + L+ LF +G ++ VKIP GK CGFV+F
Sbjct: 326 QQSAQNIDHVNLDNSNTTVFIGGLSTSTNEYELQVLFEPFGNILSVKIPIGKNCGFVKFK 385
Query: 327 DRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN 369
+ A A++ + G + G IRLSWG+S +N + + N
Sbjct: 386 RKIEANAAIKGMQGFIINGNPIRLSWGKSNNNASTKLNHKHIN 428
>gi|347839348|emb|CCD53920.1| similar to nuclear and cytoplasmic polyadenylated RNA-binding
protein pub1 [Botryotinia fuckeliana]
Length = 506
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 146/309 (47%), Gaps = 26/309 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG----YGFIEFISRAGAE 137
R L++G L + E L F TG V VK+I +K G ++ YGF+E+ AE
Sbjct: 89 RALYVGGLDPRVTEEILRQIFETTGHVQNVKIIPDKNVGAVQSKGFNYGFVEYDDPGAAE 148
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
R +QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A
Sbjct: 149 RAMQTLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA 206
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-- 254
+ S A+V+ D TGR++GYGF F + + +A++ M+G + +R +R A K
Sbjct: 207 -FGSVSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQ 265
Query: 255 ----------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 298
T G +P Q+ + TT +VGNL T +
Sbjct: 266 PSISQQQAMSAMGMTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQQD 325
Query: 299 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
L LF +G +V + + + FV+ A A+ L+G + G+ ++ SWG+ +
Sbjct: 326 LVPLFQNFGYVVETRFQSDRGFAFVKMDSHENAALAICQLSGYNVNGRPLKCSWGKDKAP 385
Query: 359 KQAQPDPNQ 367
A D +Q
Sbjct: 386 TSAGFDGSQ 394
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 165/348 (47%), Gaps = 30/348 (8%)
Query: 29 PQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAA---APQAAGVAVPPQQQGQPGEIRTLW 85
P PPP +P +++P P A+ + + +P +AG V ++ R L+
Sbjct: 48 PSHMPPPPLAP--VVIPQNTNPIPTAITSPMSGNMMSPTSAGGFV--RRAAPEPNKRALY 103
Query: 86 IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
+G L + E L F TG V +VK+I +K + + YGF+E+ AER + T NG
Sbjct: 104 VGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSKGLN-YGFVEYDDPGAAERAMATLNG 162
Query: 146 TPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGA 204
+ E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S A
Sbjct: 163 RRVHQSE--IRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEA 219
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---------- 254
+V+ D TGR++GYGFV F + S+ +A++ M+G + +R +R A K
Sbjct: 220 RVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQA 279
Query: 255 --------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 306
T G +P Q+ + + TT +VGNL T L LF +
Sbjct: 280 MAAMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNF 339
Query: 307 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
G +V + A + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 340 GYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGK 387
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 140/293 (47%), Gaps = 23/293 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ-TGQIEGYGFIEFISRAGAERVL 140
R L++G L + E L F TG V +VK+I +K + YGF+EF AER +
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAM 150
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
QT NG + E R+NWA ++DT H IFVGDL+ +V D +L + F A +
Sbjct: 151 QTLNGRRIHQSE--IRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSA-FG 207
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----- 254
S A+V+ D TGR++GYGFV F + ++ +A+ M+G + +R +R A K
Sbjct: 208 SVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPSI 267
Query: 255 -------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 301
T G +P Q+ + TT +VGNL T L
Sbjct: 268 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVP 327
Query: 302 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 328 LFHNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 380
>gi|378726298|gb|EHY52757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 481
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 144/295 (48%), Gaps = 25/295 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ---TGQIEGYGFIEFISRAGAER 138
R L++G L + E L F TG VV+VK+I +K + + YGF+E+ AER
Sbjct: 81 RALYVGGLDPRVTEDVLKQIFETTGHVVSVKIIPDKNAQFSSKGFNYGFVEYDDPGAAER 140
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRAR 197
+ T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A
Sbjct: 141 AMTTLNGRRVHQAE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 197
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--- 254
+ S A+V+ D TGR++GYGFV F + ++ +A+ M+G + +R +R+ A K
Sbjct: 198 FGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALASMDGEWLGSRAIRVNWANQKGQP 257
Query: 255 ---------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 299
T G +P Q+ ++ + TT +VGNL T L
Sbjct: 258 SISQQQAMAAMGMSPTTPFGHHHFPTQGIQSYEMVVNQTPAWQTTCYVGNLTPYTTQADL 317
Query: 300 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF +G +V + + + F++ A A+ L+G + G+ ++ SWG+
Sbjct: 318 VPLFQNFGYVVETRFQSDRGFAFIKMDTHENAAMAICQLSGYNVNGRPLKCSWGK 372
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 273 VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC---------GFV 323
V ++ +PN ++VG LD VT++ L+++F G +V VKI K GFV
Sbjct: 71 VRRAAPEPNKRALYVGGLDPRVTEDVLKQIFETTGHVVSVKIIPDKNAQFSSKGFNYGFV 130
Query: 324 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN 369
++ D AE A+ LNG ++ IR++W ++ + N ++
Sbjct: 131 EYDDPGAAERAMTTLNGRRVHQAEIRVNWAYQSNSTNKEDTSNHFH 176
>gi|322709421|gb|EFZ00997.1| oligouridylate binding protein ,putative [Metarhizium anisopliae
ARSEF 23]
Length = 472
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 143/304 (47%), Gaps = 28/304 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L+ + E L F TG V VK+I +K YGF+E+ AER +
Sbjct: 84 RALYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFN-YGFVEYDDPGAAERAMS 142
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + R+NWA ++DT H IFVGDL+ +V D +L + F A + +
Sbjct: 143 TLNG------RREIRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSA-FGT 195
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGRT+GYGFV F D S+ +A++ M+G + +R +R A K
Sbjct: 196 VSEARVMWDMKTGRTRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 255
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G Q+P + V + TT +VGNL T + L
Sbjct: 256 QQQAMQAMGLTPTTPFGHHQFPAHGVGSYDVVLNQTPNWQTTCYVGNLTPYTTPNDVVPL 315
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS-NKQA 361
F +G +V + A + F++ A A+ +NG + G+ ++ SWG+ + N Q
Sbjct: 316 FQNFGFVVESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGKDKTPNAQG 375
Query: 362 QPDP 365
DP
Sbjct: 376 NFDP 379
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 140/293 (47%), Gaps = 23/293 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ-TGQIEGYGFIEFISRAGAERVL 140
R L++G L + E L F TG V +VK+I +K + YGF+EF AER +
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAM 150
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
QT NG + E R+NWA ++DT H IFVGDL+ +V D +L + F A +
Sbjct: 151 QTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSSHFHIFVGDLSNEVNDEILLQAFSA-FG 207
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----- 254
S A+V+ D TGR++GYGFV F + ++ +A+ M+G + +R +R A K
Sbjct: 208 SVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPSI 267
Query: 255 -------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 301
T G +P Q+ + TT +VGNL T L
Sbjct: 268 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVP 327
Query: 302 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 328 LFHNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 380
>gi|302409198|ref|XP_003002433.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
gi|261358466|gb|EEY20894.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
Length = 443
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 144/306 (47%), Gaps = 26/306 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L+IG L + E L F TG V VK+I +K YGF+E+ A R +Q
Sbjct: 52 RALYIGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNQKGYN-YGFVEYDDPGAAARAMQ 110
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 111 TLNGRRV----HEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEILSQAFAA-FGS 165
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K
Sbjct: 166 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 225
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G Q+P + +V + TTV+VGNL T + L
Sbjct: 226 QQQAMQAMGMTPTTPFGHHQFPAHGMASYEVILAQTPNWQTTVYVGNLTPYTTPNDVVPL 285
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS-NKQA 361
F +G +V + A + F++ A A+ +NG + G+ ++ SWG+ + N
Sbjct: 286 FQNFGFVVESRFQADRGFAFIKMESHEAAAMAICQMNGYNVNGRPLKCSWGKDKTPNAAG 345
Query: 362 QPDPNQ 367
DP Q
Sbjct: 346 GFDPAQ 351
>gi|255642249|gb|ACU21389.1| unknown [Glycine max]
Length = 452
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 149/294 (50%), Gaps = 26/294 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + + L F G + K+IR +++ YGF+++ RA A +
Sbjct: 54 CRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASAALAI 109
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T +G + Q ++NWA A R+DT H IFVGDL+ +VTD L F YP
Sbjct: 110 MTLHGRQLYG--QALKVNWAY--ANSSREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 164
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI-------GPAT 252
S A+V+ D TGR+KGYGFV F D + A+ +M G + R +R G ++
Sbjct: 165 SCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSS 224
Query: 253 NKKTVSGQQQYPKASYQNSQVAQS-------DDDPNNTTVFVGNLDSIVTDEHLRELFSQ 305
N++ ++ Q + +S Q D++P+ TTV+VGNL VT L F
Sbjct: 225 NEEKINDSQNAVVLTNGSSDGGQDNNNEDAPDNNPSYTTVYVGNLPHDVTQAELHCQFHA 284
Query: 306 YGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G V V++ K GFV++ A A++M NG + G+N++ SWG P+
Sbjct: 285 LGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMANGRLVRGKNMKCSWGSKPT 338
>gi|302772731|ref|XP_002969783.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
gi|302806762|ref|XP_002985112.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300146940|gb|EFJ13606.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300162294|gb|EFJ28907.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
Length = 425
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 151/302 (50%), Gaps = 34/302 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + E L FA G + K+I+ +++ YGF+++ A +
Sbjct: 55 RSVYVGNIHIKVTEALLAEVFATVGPLEGCKLIKKEKSS----YGFVDYFDHRSAAAAII 110
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + Q+ ++NWA + +G++ D T + IFVGDL+ +VTD L F YP
Sbjct: 111 TLNGKLIFG--QSIKVNWA-YASGQREDTTGHYNIFVGDLSPEVTDATLYAAF-FMYPGC 166
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI------------- 248
A+V+ D+ +GR++GYGFV F + E RA+ EMNG + +RP+R
Sbjct: 167 SDARVMWDQRSGRSRGYGFVSFRSKQEAERAINEMNGKWLGSRPIRCNWATKSTGSQEDV 226
Query: 249 ---GPATNKKTVSGQQ----QYPKASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDE 297
GP + + V+ Q Q P Q+ A D P N TTV+VGNL VT
Sbjct: 227 PTPGPVSVPEQVAVVQVQMKQEPNHDEQHEDGAMQLDGPENNPQFTTVYVGNLAHEVTQT 286
Query: 298 HLRELFSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
L F G V V++ K GFV++ A A++ NG + G++++ SWG
Sbjct: 287 ELHRQFHALGVGVIEDVRVQKEKGFGFVRYRTHEEAAYAIQAANGRVICGKSVKCSWGSK 346
Query: 356 PS 357
P+
Sbjct: 347 PT 348
>gi|315052890|ref|XP_003175819.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
gi|311341134|gb|EFR00337.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
Length = 506
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 141/297 (47%), Gaps = 27/297 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTG---QIEG--YGFIEFISRAGA 136
R L++G L + E L F TG V +VK+I +K Q +G YGFIE+ A
Sbjct: 97 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNASAQFQSKGLNYGFIEYDDPGAA 156
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFR 195
ER +QT NG + E R+NWA ++DT H IFVGDL+ +V D +L + F
Sbjct: 157 ERAMQTLNGRRVHQSE--IRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFS 214
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK- 254
A S A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K
Sbjct: 215 A-CGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKG 273
Query: 255 -----------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 297
T G +P Q+ + TT +VGNL T
Sbjct: 274 QPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQN 333
Query: 298 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
L LF +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 334 DLIPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 390
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 172/347 (49%), Gaps = 32/347 (9%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
PQ GQP RTL++G+L + E + F+ G++ K+I + + Y F+EF+
Sbjct: 6 PQDGGQP---RTLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPGS---DPYCFVEFV 59
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD----HTIFVGDLAADVTD 187
+ + A + N E R+NWAS ++ PD H IFVGDL+ +
Sbjct: 60 NHSDASSAITAMNARMCLGRE--LRVNWASSAIQQQTPHRPDTSKHHHIFVGDLSPQIET 117
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
L+E F + + +VV D T ++KGYGFV F ++ + A+ M+G + +R +R
Sbjct: 118 SDLREAF-SPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGSWLGSRAIR 176
Query: 248 IGPAT----NKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE-HLREL 302
A+ +K+T S + +A + AQS P+N TV+ G L+ + + E LR+
Sbjct: 177 TNWASRKPNHKETGSYIGGHHRALNYDEVFAQSS--PSNCTVYCGGLNQMASSEDFLRQA 234
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR--SPSNKQ 360
F ++G++V +++ K F++F + A A+ + + +GGQ ++ SWG+ P+ Q
Sbjct: 235 FDEFGEIVDIRLFKDKGYAFIKFNSKESACRAIVARHNSDIGGQAVKCSWGKEQEPAQPQ 294
Query: 361 AQPDPNQWNAGYYGYAQ-------GYENYGYAAAAPQDPSMYYGGYP 400
DP Q N Y GY+ Y N YAAA YYG YP
Sbjct: 295 FPYDPYQMNYWYSGYSMDGNYMGGDYMNQMYAAAP---YGQYYGQYP 338
>gi|449273177|gb|EMC82785.1| tRNA selenocysteine 1-associated protein 1, partial [Columba livia]
Length = 278
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 7/170 (4%)
Query: 89 LQYWMDETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP 147
L+ +MDE +++ FA GE+V +VK+IRN+ TG GY F+EF A AE+ L NG P
Sbjct: 1 LEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 60
Query: 148 MPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAK 205
+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +G K
Sbjct: 61 LPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGK 118
Query: 206 VVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
VV+D+ G ++GYGFV+F DE EQ RA+TE G V ++P+R+ A K
Sbjct: 119 VVLDQ-AGVSRGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 167
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 190 LQETFRARYPSTKG-----AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+ E F +R +T G K++ +RLTG GY FV F D + + + ++NG +
Sbjct: 5 MDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----K 59
Query: 245 PMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
P+ G K+ Y K Q D+ P ++FVG+L V D L E F
Sbjct: 60 PLP-GATPAKRFKLNYATYGK---------QPDNSP-EYSLFVGDLTPDVDDGMLYEFFV 108
Query: 305 QY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 357
+ G++V + + GFV+F D + AL G LG + +RLS +
Sbjct: 109 KVYPSCRGGKVVLDQAGVSRGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKA 168
Query: 358 NK 359
N+
Sbjct: 169 NR 170
>gi|165935740|gb|ABY75165.1| RNA binding protein [Arachis diogoi]
Length = 142
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 98/139 (70%), Gaps = 6/139 (4%)
Query: 274 AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEE 333
+QS+ D NTT+FVG LD VTDE LR+ FSQYG++V VK+P GK CGFVQFA R+ AEE
Sbjct: 2 SQSEADSTNTTIFVGGLDPNVTDEDLRQQFSQYGEIVSVKVPVGKGCGFVQFAIRNNAEE 61
Query: 334 ALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD--PNQWNAGYYGYAQGYENYGYAAAAPQD 391
AL+ LNGT +G Q +RLSWGR+P+NKQ + D N W+ YYG A Y+ YGYA P D
Sbjct: 62 ALQKLNGTVIGKQTVRLSWGRNPANKQFRMDFGGNHWSGTYYG-APVYDGYGYALPPPHD 120
Query: 392 PSM---YYGGYPGYGNYQQ 407
PS+ Y YP YG +QQ
Sbjct: 121 PSIYAAAYAAYPIYGGHQQ 139
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + + L F+ GE+V+VKV K G GF++F R AE LQ
Sbjct: 12 TIFVGGLDPNVTDEDLRQQFSQYGEIVSVKVPVGK------GCGFVQFAIRNNAEEALQK 65
Query: 143 FNGTPMPNGEQNFRLNWA 160
NGT + G+Q RL+W
Sbjct: 66 LNGTVI--GKQTVRLSWG 81
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
D+ + TIFVG L +VTD L++ F ++Y KV + KG GFV+F +
Sbjct: 7 DSTNTTIFVGGLDPNVTDEDLRQQF-SQYGEIVSVKVPVG------KGCGFVQFAIRNNA 59
Query: 230 LRAMTEMNGVFCSTRPMRIGPATN 253
A+ ++NG + +R+ N
Sbjct: 60 EEALQKLNGTVIGKQTVRLSWGRN 83
>gi|403359035|gb|EJY79175.1| Nuclear acid binding protein, putative [Oxytricha trifallax]
Length = 474
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 110/210 (52%), Gaps = 34/210 (16%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
GQ G +TLWIGD++ WMD+ Y+++ F+ V VK+IR+K G GYGF+EF +
Sbjct: 11 GQVGA-KTLWIGDVEPWMDDAYISSLFSGIASVQTVKLIRDKLKGTPVGYGFVEFPNHDV 69
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAG----------------EKRDDTP------- 172
A V T NG+ +P ++++LNWA+ G G + + P
Sbjct: 70 ARNVYLTLNGSVIPGTTKSYKLNWATHGNGGIKQIQNQPQSQPPHLQMHNQNPQMMNQGG 129
Query: 173 ----------DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
D I+VGDL +V D ML F +YPS AKV++D +T +KGYGFV+
Sbjct: 130 PGGAQQQQQGDFQIYVGDLDPNVNDQMLLNVFNKKYPSVTQAKVIVDPVTRYSKGYGFVK 189
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
FG + E AM EM G + +PM+I A
Sbjct: 190 FGSQEESQNAMVEMQGYYLFKKPMKINQAN 219
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GD+ + D + F S + K++ D+L G GYGFV F +
Sbjct: 17 TLWIGDVEPWMDDAYISSLFSG-IASVQTVKLIRDKLKGTPVGYGFVEFPNHDVARNVYL 75
Query: 235 EMNGVFC--STRPMRIGPATNK----KTVSGQQQ----YPKASYQNSQVAQ-------SD 277
+NG +T+ ++ AT+ K + Q Q + + QN Q+
Sbjct: 76 TLNGSVIPGTTKSYKLNWATHGNGGIKQIQNQPQSQPPHLQMHNQNPQMMNQGGPGGAQQ 135
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFS-QYGQLVHVKIPA------GKRCGFVQFADRSC 330
+ ++VG+LD V D+ L +F+ +Y + K+ K GFV+F +
Sbjct: 136 QQQGDFQIYVGDLDPNVNDQMLLNVFNKKYPSVTQAKVIVDPVTRYSKGYGFVKFGSQEE 195
Query: 331 AEEALRMLNGTQL 343
++ A+ + G L
Sbjct: 196 SQNAMVEMQGYYL 208
>gi|409083337|gb|EKM83694.1| hypothetical protein AGABI1DRAFT_110331 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 444
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 156/305 (51%), Gaps = 31/305 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRSAETALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + + +FVGDL+ +V D +L + F A + +
Sbjct: 77 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSA-FGTL 133
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ- 260
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT G
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQGGAP 192
Query: 261 --QQYPK------------------ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
QQ P+ SY+ S V Q+ NTTV+VGNL T L
Sbjct: 193 AVQQSPRPAGSTGGAPAPINFQGGPLSYE-SVVQQTP--AYNTTVYVGNLVPYCTQADLI 249
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
LF G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++
Sbjct: 250 PLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGT 309
Query: 361 AQPDP 365
A P
Sbjct: 310 AAAQP 314
>gi|402079107|gb|EJT74372.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 482
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 164/361 (45%), Gaps = 29/361 (8%)
Query: 30 QQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPG-EIRTLWIGD 88
Q QPPP P P P A M +A + G P ++ P R L++G
Sbjct: 36 QMQPPPLHIP--QNTNPIPTAITSPMGGGDKSALMSPGGTSPFGRRTAPEPNKRALYVGG 93
Query: 89 LQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPM 148
L + E L F TG V VK+I +K YGF+E+ A+R +QT NG +
Sbjct: 94 LDARVTEDVLRQIFETTGHVQNVKIIPDKNAKGFN-YGFVEYDDPGAADRAMQTLNGRRV 152
Query: 149 PNGEQNFRLNWASFGAGEK-RDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKV 206
E R+NWA A ++DT +H IFVGDL+ +V D +L + F + S A+V
Sbjct: 153 HQSE--IRVNWAYQSANTTTKEDTSNHFHIFVGDLSNEVNDEVLTQAFSV-FGSVSEARV 209
Query: 207 VIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------------ 254
+ D TGR++GYGFV F D + +A++ M+G + +R +R A K
Sbjct: 210 MWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQ 269
Query: 255 ------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQ 308
T G +P Q+ ++ + TT +VGNL T L LF +G
Sbjct: 270 AMGMTPTTPYGHHHFPTHGMQSYEMVLNQTPAYQTTCYVGNLTPYTTANDLVPLFQNFGY 329
Query: 309 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPN 366
+V + + + F++ A A+ LNG + G+ ++ SWG+ + Q DP+
Sbjct: 330 VVESRFQSDRGFAFIKMDTHENATSAICNLNGYNVNGRPLKCSWGKDKNTASPQVGFDPS 389
Query: 367 Q 367
Q
Sbjct: 390 Q 390
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 145/305 (47%), Gaps = 23/305 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K + YGF+E+ AER +Q
Sbjct: 77 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNA-KGYNYGFVEYDDPGAAERAMQ 135
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 136 TLNGRRVHQSE--IRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILLQAFSA-FGS 192
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K
Sbjct: 193 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 252
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G Q+P + ++ + TT +VGNL T + L
Sbjct: 253 QQQAMQAMGMTPTTPFGHHQFPAHGIASYEMILAQTPNWQTTCYVGNLTPYTTPNDVVPL 312
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
F +G +V + A + F++ A A+ +NG + G+ ++ SWG+ +
Sbjct: 313 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTPNSGS 372
Query: 363 PDPNQ 367
DP Q
Sbjct: 373 FDPQQ 377
>gi|156058654|ref|XP_001595250.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980]
gi|154701126|gb|EDO00865.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 501
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 144/305 (47%), Gaps = 23/305 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K + YGF+E+ AER +Q
Sbjct: 89 RALYVGGLDPRVTEEVLRQIFETTGHVQNVKIIPDKNSKGFN-YGFVEYDDPGAAERAMQ 147
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 148 TLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 204
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGF F + + +A++ M+G + +R +R A K
Sbjct: 205 VSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 264
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P Q+ + TT +VGNL T + L L
Sbjct: 265 QQQAMSAMGMTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQQDLVPL 324
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
F +G +V + A + FV+ A A+ L+G + G+ ++ SWG+ + A
Sbjct: 325 FQNFGYVVETRFQADRGFAFVKMDSHENAALAICQLSGYNVNGRPLKCSWGKDKAPTSAG 384
Query: 363 PDPNQ 367
D +Q
Sbjct: 385 FDGSQ 389
>gi|242806685|ref|XP_002484795.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
gi|218715420|gb|EED14842.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
Length = 482
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 174/378 (46%), Gaps = 41/378 (10%)
Query: 9 VPPPPPPMAAHQYQYQ--------QQAPPQQQPPPQPSPYMMMMPPQPQAQPPAM---WA 57
+PPPP P A Q Q Q QPP P +++P + P A+ +
Sbjct: 13 LPPPPQPSAGAPGQPQFDSAQGNGQGTGAHMQPPSLPP---VVIPQKTNPIPTAITSPMS 69
Query: 58 TQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK 117
Q +P +AG V ++ R L+IG L + E L F TG V +VK+I +K
Sbjct: 70 GQMMSPTSAGGFV--RRAAPEPNKRALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDK 127
Query: 118 QTGQIEG--YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH- 174
Q +G YGF+E+ AER +QT NG + E R+NWA ++DT +H
Sbjct: 128 NF-QSKGMNYGFVEYDDPGAAERAMQTLNGRRIHQSE--IRVNWAYQSNNSHKEDTSNHF 184
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
IFVGDL+ +V D +L + F A + S A+V+ D TGR++GYGFV F + + +A+
Sbjct: 185 HIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKALK 243
Query: 235 EMNGVFCSTRPMRIGPATNKKTVS------------------GQQQYPKASYQNSQVAQS 276
M+ + +R +R A K S G +P + + +
Sbjct: 244 SMDREWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPSAPFGHHHFPTHGANSYDMVVA 303
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALR 336
TT +VGNL T L LF +G +V ++ A + F++ A A+
Sbjct: 304 QTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRLQADRGFAFLKMDTHENAAMAIC 363
Query: 337 MLNGTQLGGQNIRLSWGR 354
LNG Q+ G+ ++ SWG+
Sbjct: 364 QLNGYQVNGRPLKCSWGK 381
>gi|426201609|gb|EKV51532.1| hypothetical protein AGABI2DRAFT_189771 [Agaricus bisporus var.
bisporus H97]
Length = 469
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 156/305 (51%), Gaps = 31/305 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRSAETALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + + +FVGDL+ +V D +L + F A + +
Sbjct: 77 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSA-FGTL 133
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ- 260
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT G
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQGGAP 192
Query: 261 --QQYPK------------------ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
QQ P+ SY+ S V Q+ NTTV+VGNL T L
Sbjct: 193 AVQQSPRPAGSTGGAPAPINFQGGPLSYE-SVVQQTP--AYNTTVYVGNLVPYCTQADLI 249
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
LF G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++
Sbjct: 250 PLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGT 309
Query: 361 AQPDP 365
A P
Sbjct: 310 AAAQP 314
>gi|330933733|ref|XP_003304275.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
gi|311319203|gb|EFQ87630.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 145/314 (46%), Gaps = 38/314 (12%)
Query: 76 GQPGEI----------RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-- 123
GQPG + R L++G L + E L F TG V +VK+I +K
Sbjct: 67 GQPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFN 126
Query: 124 ----GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFV 178
YGF+E+ AER + T NG + N E R+NWA ++DT +H IFV
Sbjct: 127 SKGFNYGFVEYDDPGAAERGMATLNGRRIHNNE--IRVNWAYQSNNTAKEDTSNHFHIFV 184
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL+ +V D +L + F P ++ A+V+ D TGR++GYGFV F D ++ RA++ M+G
Sbjct: 185 GDLSNEVNDEVLLQAFSTFGPVSE-ARVMWDMKTGRSRGYGFVAFRDRADADRALSSMDG 243
Query: 239 VFCSTRPMRIGPATNK------------------KTVSGQQQYPKASYQNSQVAQSDDDP 280
+ +R +R A K T G +P Q+ + S
Sbjct: 244 EWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVSQTPA 303
Query: 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 340
TT +VGNL + L LF +G + + + + F++ A A+ LNG
Sbjct: 304 WQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNG 363
Query: 341 TQLGGQNIRLSWGR 354
+ G+ ++ SWG+
Sbjct: 364 YNVNGRPLKCSWGK 377
>gi|384247365|gb|EIE20852.1| hypothetical protein COCSUDRAFT_4708, partial [Coccomyxa
subellipsoidea C-169]
Length = 264
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 148/275 (53%), Gaps = 17/275 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+ L++G+L +++E L F+ G V V++++++ TG G F++F A L+
Sbjct: 5 KALYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAAIALK 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPS 200
T NG + N E R+ WA EK ++T H+ IFVG+L+ DV D +L + F+
Sbjct: 65 TINGRILYNKE--VRIQWAF--QKEKTENTASHSHIFVGNLSGDVADPVLLQAFQ-HLGE 119
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-KTVSG 259
A+V+ D TGR+KG+GFV F + +A+ EM+G +R G A +K + V+G
Sbjct: 120 CSDARVMWDHSTGRSKGFGFVSFRTKEAAEKALAEMDGAQVGQWKIRCGWAHHKTEAVTG 179
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
V ++ DP NT V+VGNL + V +E LR F YG++ +K
Sbjct: 180 --------LDIDTVDRA--DPANTNVYVGNLPTEVMEEDLRAAFGAYGEITGLKPCHKGG 229
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
GFV + D S A +A+ +NG +L G+ ++ SWGR
Sbjct: 230 YGFVTYRDHSAAVQAIVGMNGKELKGKMVKCSWGR 264
>gi|15221031|ref|NP_175810.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|4587549|gb|AAD25780.1|AC006577_16 Similar to gb|U55861 RNA binding protein nucleolysin (TIAR) from
Mus musculus and contains several PF|00076 RNA
recognition motif domains. ESTs gb|T21032 and gb|T44127
come from this gene [Arabidopsis thaliana]
gi|13194792|gb|AAK15558.1|AF348587_1 putative oligouridylate binding protein [Arabidopsis thaliana]
gi|13605627|gb|AAK32807.1|AF361639_1 At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|22137190|gb|AAM91440.1| At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|332194924|gb|AEE33045.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 426
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 34/317 (10%)
Query: 67 GVAVPPQQQ----------GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
GV PPQ + P R+++ G++ + E L FA TG + + K+IR
Sbjct: 38 GVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRK 97
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTI 176
++ YGF+ + R A + T NG + Q ++NWA + G++ D + I
Sbjct: 98 DKSS----YGFVHYFDRRCASMAIMTLNGRHIFG--QPMKVNWA-YATGQREDTSSHFNI 150
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
FVGDL+ +VTD L ++F A + S A+V+ D+ TGR++G+GFV F ++ + A+ EM
Sbjct: 151 FVGDLSPEVTDAALFDSFSA-FNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 209
Query: 237 NGVFCSTRPMRIGPAT-------NKKTVSGQQ--QYPKASYQNSQVAQSDDDPNN----T 283
NG + S+R +R AT +K + G+ + S ++ + ++D P N T
Sbjct: 210 NGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNPQFT 269
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGT 341
TV+VGNL VT L LF G V V++ K GFV++ A A++M N
Sbjct: 270 TVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQ 329
Query: 342 -QLGGQNIRLSWGRSPS 357
L + IR SWG P+
Sbjct: 330 PFLFSRQIRCSWGNKPT 346
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 155/282 (54%), Gaps = 19/282 (6%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E RTL++G+L + E ++ T F G V KVI + G + Y F+EF A A +
Sbjct: 40 EPRTLYVGNLDPTVSEDFVATLFNQIGSVTKTKVIFD---GANDPYAFVEFSDHAQASQA 96
Query: 140 LQTFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRAR 197
LQT N + + E ++NWA G + DT H +FVGDL+++V + L+E F+
Sbjct: 97 LQTMNKRLLLDRE--MKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP- 153
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K
Sbjct: 154 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK--- 210
Query: 258 SGQQQ----YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
G Q+ Y + SY S D NT+V+VGN+ ++ ++E +R+ F+ YG++ V+
Sbjct: 211 PGDQEKPVHYNEKSYDEIYNQTSGD---NTSVYVGNIANL-SEEDIRQAFASYGRISEVR 266
Query: 314 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
I + FV+F ++ A +A+ +N ++GGQ +R SWG++
Sbjct: 267 IFKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWGKT 308
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 154/282 (54%), Gaps = 19/282 (6%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E RTL++G+L + E + T F G V KVI + G + Y F+EF+ + A +
Sbjct: 42 EPRTLYVGNLDPSVSEDLIATLFNQIGSVTKTKVIFD---GANDPYAFVEFLDHSQASQA 98
Query: 140 LQTFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRAR 197
LQT N + + E ++NWA G + DT H +FVGDL+++V + L+E F+
Sbjct: 99 LQTMNKRLLLDRE--MKVNWAVEPGQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQP- 155
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K
Sbjct: 156 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK--- 212
Query: 258 SGQQQ----YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
G Q+ Y + S+ S D NT+V+VGN+ ++ DE +R+ F+ YG++ V+
Sbjct: 213 PGDQEKPTHYNEKSFDEIYNQTSGD---NTSVYVGNIANLSEDE-IRQAFASYGRISEVR 268
Query: 314 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
I + FV+F ++ A +A+ +N ++GGQ +R SWG++
Sbjct: 269 IFKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWGKT 310
>gi|320585953|gb|EFW98632.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Grosmannia clavigera kw1407]
Length = 488
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 158/346 (45%), Gaps = 30/346 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K YGF+E+ AER +Q
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYN-YGFVEYDDPGAAERAMQ 145
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
NG + E R+NWA ++DT H IFVGDL+ +V D +L + F + + S
Sbjct: 146 NLNGRRVHQSE--IRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEVLTQAFTS-FGS 202
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K
Sbjct: 203 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 262
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P + ++ + TT +VGNL T L L
Sbjct: 263 QQQALQQVGMTPTTPFGHHHFPTQGINSYEMVINQTPAWQTTCYVGNLTPYTTQNDLVPL 322
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
F +G +V + + + F++ A A+ LNG + G+ ++ SWG+ +
Sbjct: 323 FQNFGYVVESRFQSDRGFAFIKLDSHENAAMAICQLNGYNVNGRPLKCSWGKDKTPNAQG 382
Query: 363 PDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPG-YGNYQQ 407
DP+Q + G AQ Y P P+ Y+ Y YGN QQ
Sbjct: 383 FDPSQQSYGSPQSAQAPGPY------PGSPTTYFPQYGAQYGNGQQ 422
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 144/305 (47%), Gaps = 23/305 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K YGF+E+ AER +Q
Sbjct: 75 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYN-YGFVEYDDPGAAERAMQ 133
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 134 TLNGRRVHQSE--IRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILMQAFSA-FGS 190
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K
Sbjct: 191 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 250
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G Q+P + ++ + TT +VGNL T + L
Sbjct: 251 QQQAMQAMGMTPTTPFGHHQFPAHGVASYEMILAQTPNWQTTCYVGNLTPYTTPNDVVPL 310
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
F +G ++ + A + F++ A A+ +NG + G+ ++ SWG+ +
Sbjct: 311 FQNFGFVMESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGKDKAPNSGS 370
Query: 363 PDPNQ 367
DP Q
Sbjct: 371 FDPQQ 375
>gi|194701250|gb|ACF84709.1| unknown [Zea mays]
Length = 424
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 154/303 (50%), Gaps = 36/303 (11%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E+ L F G V K+IR +++ +GF+++ R A
Sbjct: 44 PSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSAA 99
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ T +G + Q ++NWA A +R+DT H IFVGDL+++V D L F A
Sbjct: 100 LAIMTLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA 155
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS A+V+ D TGR++GYGFV F ++ E A+TEM G + +R +R AT +
Sbjct: 156 -YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNS 214
Query: 257 VSGQQQYPKASYQN----------------SQVAQSDDDPNN----TTVFVGNLDSIVTD 296
++ P+ N SQ A S ++P N TTV+VGNL V
Sbjct: 215 ----EEKPETDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDCTTVYVGNLGHEVNR 270
Query: 297 EHLRELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ L F G + +++ K GFV+++ A A++M NG + G++I+ SWG
Sbjct: 271 DELHRHFYNLGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMANGLVVRGKSIKCSWGN 330
Query: 355 SPS 357
P+
Sbjct: 331 KPT 333
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F+ + G + +GFV + D
Sbjct: 43 DPSTCRSVYVGNVNPNVTESLLIEVFQ-----SAGLVERCKLIRKEKSSFGFVDYYDRRS 97
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ ++G + + GQ +Y ++Q +D + +FVG
Sbjct: 98 AALAIMTLHG----------------RHIYGQAIKVNWAYASTQ---REDTSGHFHIFVG 138
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L S V D L FS Y ++ + G FV F ++ AE A+ + G
Sbjct: 139 DLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 198
Query: 343 LGGQNIRLSWGRSPSNKQAQPDPNQWNA 370
LG + IR +W + +N + +P+ + NA
Sbjct: 199 LGSRQIRCNWA-TKTNSEEKPETDNHNA 225
>gi|226505614|ref|NP_001148740.1| LOC100282356 [Zea mays]
gi|195621754|gb|ACG32707.1| mRNA 3-UTR binding protein [Zea mays]
gi|224030425|gb|ACN34288.1| unknown [Zea mays]
gi|413921566|gb|AFW61498.1| mRNA 3-UTR binding protein [Zea mays]
Length = 449
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 154/303 (50%), Gaps = 36/303 (11%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E+ L F G V K+IR +++ +GF+++ R A
Sbjct: 69 PSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSAA 124
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ T +G + Q ++NWA A +R+DT H IFVGDL+++V D L F A
Sbjct: 125 LAIMTLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA 180
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS A+V+ D TGR++GYGFV F ++ E A+TEM G + +R +R AT +
Sbjct: 181 -YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNS 239
Query: 257 VSGQQQYPKASYQN----------------SQVAQSDDDPNN----TTVFVGNLDSIVTD 296
++ P+ N SQ A S ++P N TTV+VGNL V
Sbjct: 240 ----EEKPETDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDCTTVYVGNLGHEVNR 295
Query: 297 EHLRELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ L F G + +++ K GFV+++ A A++M NG + G++I+ SWG
Sbjct: 296 DELHRHFYNLGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMANGLVVRGKSIKCSWGN 355
Query: 355 SPS 357
P+
Sbjct: 356 KPT 358
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F+ + G + +GFV + D
Sbjct: 68 DPSTCRSVYVGNVNPNVTESLLIEVFQ-----SAGLVERCKLIRKEKSSFGFVDYYDRRS 122
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ ++G + + GQ +Y ++Q +D + +FVG
Sbjct: 123 AALAIMTLHG----------------RHIYGQAIKVNWAYASTQ---REDTSGHFHIFVG 163
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L S V D L FS Y ++ + G FV F ++ AE A+ + G
Sbjct: 164 DLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 223
Query: 343 LGGQNIRLSWGRSPSNKQAQPDPNQWNA 370
LG + IR +W + +N + +P+ + NA
Sbjct: 224 LGSRQIRCNWA-TKTNSEEKPETDNHNA 250
>gi|451847206|gb|EMD60514.1| hypothetical protein COCSADRAFT_29739 [Cochliobolus sativus ND90Pr]
Length = 506
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 161/360 (44%), Gaps = 47/360 (13%)
Query: 30 QQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEI-------- 81
Q PPP +P ++ PQ P T ++P + P GQPG +
Sbjct: 31 QHMPPPPLAPVII-----PQNNNPI--PTAISSPMSGNPMSP--TSGQPGYVPRRAAPEP 81
Query: 82 --RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE------GYGFIEFISR 133
R L++G L + E L F TG V +VK+I +K YGF+E+
Sbjct: 82 NKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDP 141
Query: 134 AGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQE 192
AER + T NG + N E R+NWA ++DT +H IFVGDL+ +V D +L +
Sbjct: 142 GAAERGMATLNGRRIHNNE--IRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQ 199
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F P ++ A+V+ D TGR++GYGFV F D ++ RA+ M+G + +R +R A
Sbjct: 200 AFSTFGPVSE-ARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWLGSRAIRCNWAN 258
Query: 253 NK------------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
K T G +P Q+ + + TT +VGNL
Sbjct: 259 QKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYT 318
Query: 295 TDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ L LF +G + + + + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 319 SQADLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 378
>gi|313226301|emb|CBY21445.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 154/318 (48%), Gaps = 24/318 (7%)
Query: 70 VPPQQQGQPGEI--RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
V +Q + EI RTL++G+L E L FA G VV +K+I N Y F
Sbjct: 33 VRLSEQAKDDEIFKRTLYVGNLHKNATENVLKALFAVIGNVVDIKMI-NDAALSTSHYCF 91
Query: 128 IEFISRAGAERVLQTFNGT---PMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
I + + GA+R L NG MP ++NWA+ G K+D + DH IFVGDLA +
Sbjct: 92 ITYETHVGAQRALAAMNGRDVYKMP-----LKVNWATRPDGIKKDTSKDHHIFVGDLAQE 146
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T LQ F ++ A+VV D T R+KGYGFV F + A+TEMN R
Sbjct: 147 LTTLDLQNEFE-KFGKISEARVVRDAQTNRSKGYGFVAFLKKESAEMAITEMNNKSICGR 205
Query: 245 PMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV-TDEHLRELF 303
+R AT++K P +VAQ+ +NTTV+VG + V T + L+ F
Sbjct: 206 EVRTNWATSRKLP------PPTVIDPHKVAQA-SSFSNTTVYVGGITKDVHTQQVLQASF 258
Query: 304 SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP 363
S++G + V+ + GFV+ A A+ +NG + G ++ WG+ + ++
Sbjct: 259 SRFGVVEEVR--TFETFGFVKMQTHQAATNAICEMNGASISGCTVKCRWGK--DDHKSSN 314
Query: 364 DPNQWNAGYYGYAQGYEN 381
D N Y A G +N
Sbjct: 315 DGNHQYGHNYKEANGSQN 332
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 29/215 (13%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + L F G++ +V+R+ QT + +GYGF+ F+ + AE +
Sbjct: 138 IFVGDLAQELTTLDLQNEFEKFGKISEARVVRDAQTNRSKGYGFVAFLKKESAEMAITEM 197
Query: 144 NGTPMPNGEQNFRLNWASF-----------GAGEKRDDTPDHTIFVGDLAADV-TDYMLQ 191
N + E R NWA+ + + T++VG + DV T +LQ
Sbjct: 198 NNKSICGRE--VRTNWATSRKLPPPTVIDPHKVAQASSFSNTTVYVGGITKDVHTQQVLQ 255
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCS--TRPMRIG 249
+F +R+ VV + T T +GFV+ A+ EMNG S T R G
Sbjct: 256 ASF-SRF------GVVEEVRTFET--FGFVKMQTHQAATNAICEMNGASISGCTVKCRWG 306
Query: 250 PATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTT 284
+K + G QY N + A + +NTT
Sbjct: 307 KDDHKSSNDGNHQYG----HNYKEANGSQNSSNTT 337
>gi|212538447|ref|XP_002149379.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069121|gb|EEA23212.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 482
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 172/375 (45%), Gaps = 36/375 (9%)
Query: 9 VPPPPPPMAAH----QYQYQQ---QAPPQQQPPPQPSPYMM-MMPPQPQAQPPAMWATQA 60
+PPPP P A Q+ Q Q PPP P ++ P P A M + Q
Sbjct: 13 LPPPPQPSAGAPGQPQFDSAQGNGQGTGAHMPPPSLPPVVIPNTNPIPTAITSPM-SGQM 71
Query: 61 AAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTG 120
+P + G V ++ R L+IG L + E L F TG V +VK+I +K
Sbjct: 72 MSPTSTGGFV--RRAAPEPNKRALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDKNF- 128
Query: 121 QIEG--YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIF 177
Q +G YGF+E+ AER +QT NG + E R+NWA ++DT +H IF
Sbjct: 129 QSKGMNYGFVEYDDPGAAERAMQTLNGRRIHQSE--IRVNWAYQSNNTHKEDTSNHFHIF 186
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ +V D +L + F A + S A+V+ D TGR++GYGFV F + + +A+ M+
Sbjct: 187 VGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMD 245
Query: 238 GVFCSTRPMRIGPATNKKTVS------------------GQQQYPKASYQNSQVAQSDDD 279
+ +R +R A K S G +P + + +
Sbjct: 246 REWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTAPFGHHHFPTHGANSYDMVVAQTP 305
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 339
TT +VGNL T L LF +G +V ++ A + F++ A A+ LN
Sbjct: 306 QWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRLQADRGFAFLKMDTHENAAMAICQLN 365
Query: 340 GTQLGGQNIRLSWGR 354
G Q+ G+ ++ SWG+
Sbjct: 366 GYQVNGRPLKCSWGK 380
>gi|432883111|ref|XP_004074210.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Oryzias
latipes]
Length = 305
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 108/177 (61%), Gaps = 8/177 (4%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ TLW+G+L +MDE ++ F+ GE VV V++IRNK TG GY F+E A AER
Sbjct: 1 MSTLWMGNLDSYMDEKFITRAFSTMGEQVVNVRIIRNKMTGGAMGYCFVEMSDEATAERC 60
Query: 140 LQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
L+ NG +P N F+LN A+FG K++ P ++FVGDL +V D ML E F R
Sbjct: 61 LRKINGKSLPGANPPTRFKLNRATFG---KQEAGPMFSLFVGDLTPEVDDGMLYEFFYNR 117
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATN 253
YPS +G KVV+D + G +KG GFV+F DE Q RA+ E G ++P+R+ A N
Sbjct: 118 YPSCRGGKVVLDSM-GNSKGCGFVQFPDERLQKRALEECQGAMGLGSKPLRLSLAAN 173
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 106/253 (41%), Gaps = 49/253 (19%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKG-----AKVVIDRLTGRTKGYGFVRFGDESEQ 229
T+++G+L D + E F R ST G +++ +++TG GY FV DE+
Sbjct: 3 TLWMGNL-----DSYMDEKFITRAFSTMGEQVVNVRIIRNKMTGGAMGYCFVEMSDEATA 57
Query: 230 LRAMTEMNGVFC--STRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
R + ++NG + P R N+ T Q+ P S +FV
Sbjct: 58 ERCLRKINGKSLPGANPPTRF--KLNRATFGKQEAGPMFS-----------------LFV 98
Query: 288 GNLDSIVTDEHLRELF------SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 341
G+L V D L E F + G++V + K CGFVQF D + AL G
Sbjct: 99 GDLTPEVDDGMLYEFFYNRYPSCRGGKVVLDSMGNSKGCGFVQFPDERLQKRALEECQGA 158
Query: 342 Q-LGGQNIRLSW-GRSPSNKQAQPDPNQ--W--NAGY-YGYAQGYENYGYAAAAP----- 389
LG + +RLS + NKQ Q + W ++GY Y Y+N Y P
Sbjct: 159 MGLGSKPLRLSLAANNLRNKQPQQSEQKQTWPSSSGYSYDQYNQYQNQAYPGYYPSWGYD 218
Query: 390 QDPSMYYGGYPGY 402
Q +MY YP Y
Sbjct: 219 QTAAMYGYSYPQY 231
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYG-QLVHVKIPAGKRCG------FVQFADRSCAEEAL 335
+T+++GNLDS + ++ + FS G Q+V+V+I K G FV+ +D + AE L
Sbjct: 2 STLWMGNLDSYMDEKFITRAFSTMGEQVVNVRIIRNKMTGGAMGYCFVEMSDEATAERCL 61
Query: 336 RMLNGTQLGGQN--IRLSWGRSPSNKQ 360
R +NG L G N R R+ KQ
Sbjct: 62 RKINGKSLPGANPPTRFKLNRATFGKQ 88
>gi|297853192|ref|XP_002894477.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
gi|297340319|gb|EFH70736.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
Length = 417
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 34/317 (10%)
Query: 67 GVAVPPQQQ----------GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
GV PPQ + P R+++ G++ + E L FA TG + + K+IR
Sbjct: 34 GVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRK 93
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTI 176
++ YGF+ + R A + T NG + Q ++NWA + G++ D + I
Sbjct: 94 DKSS----YGFVHYFDRRCASMAIMTLNGRHIFG--QPMKVNWA-YATGQREDTSSHFNI 146
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
FVGDL+ +VTD L ++F A + S A+V+ D+ TGR++G+GFV F ++ + A+ EM
Sbjct: 147 FVGDLSPEVTDAALFDSFSA-FNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 205
Query: 237 NGVFCSTRPMRIGPAT-------NKKTVSGQQ--QYPKASYQNSQVAQSDDDPNN----T 283
NG + S+R +R AT +K + G+ + S ++ + ++D P N T
Sbjct: 206 NGKWLSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNPQYT 265
Query: 284 TVFVGNLDSIVTDEHLRELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 341
TV+VGNL VT L LF G + V++ K GFV++ A A++M N
Sbjct: 266 TVYVGNLSPEVTQLDLHRLFYTLGAGAIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQ 325
Query: 342 -QLGGQNIRLSWGRSPS 357
L + I+ SWG P+
Sbjct: 326 PYLFSRQIKCSWGNKPT 342
>gi|401887565|gb|EJT51549.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 2479]
gi|406699766|gb|EKD02963.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 381
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 144/278 (51%), Gaps = 12/278 (4%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L+IG++ + + L F+ G VV+ K+I RN G YGF+E+ AE+ L
Sbjct: 15 LYIGNMSPRVTDQMLAEIFSVAGPVVSAKIIQDRNFHHGGYN-YGFVEYTDMRSAEQALT 73
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G G + D +FVGDL+ +V D +L + F A++ S
Sbjct: 74 TLNGRKIFDSE--IRVNWAYQGQGNREDTQHHFHVFVGDLSPEVNDDILGKAF-AKFASL 130
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K G +
Sbjct: 131 SEARVMWDMNSGKSRGYGFLSFRDKADAEQAIATMNGEWLGSRAIRVNWANQKTQTGGSR 190
Query: 262 QYPKASYQN-----SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 316
N QVA D NTTV+VGNL T L LF YG +V +++ A
Sbjct: 191 SLGLGQGFNGPLTFEQVAAQTPD-YNTTVYVGNLIPYTTQADLIPLFQNYGYIVEIRMQA 249
Query: 317 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ FV+ + A ++ L + G+ I+ SWG+
Sbjct: 250 DRGFAFVKLDTHANAALSITSLQNQLVHGRPIKCSWGK 287
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 270 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGF 322
N+Q A++ P+ +++GN+ VTD+ L E+FS G +V KI G GF
Sbjct: 3 NNQAAEAPKKPH---LYIGNMSPRVTDQMLAEIFSVAGPVVSAKIIQDRNFHHGGYNYGF 59
Query: 323 VQFADRSCAEEALRMLNGTQLGGQNIRLSW 352
V++ D AE+AL LNG ++ IR++W
Sbjct: 60 VEYTDMRSAEQALTTLNGRKIFDSEIRVNW 89
>gi|115477340|ref|NP_001062266.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|42408523|dbj|BAD09702.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|42409171|dbj|BAD10437.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113624235|dbj|BAF24180.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|215697677|dbj|BAG91671.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640879|gb|EEE69011.1| hypothetical protein OsJ_27962 [Oryza sativa Japonica Group]
Length = 447
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 152/299 (50%), Gaps = 28/299 (9%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E+ L F +G V K+IR +++ +GF+++ R A
Sbjct: 69 PSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSAA 124
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ T +G + Q ++NWA A +R+DT H IFVGDL+++V D L F A
Sbjct: 125 LAIMTLHGRHICG--QAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA 180
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS A+V+ D TGR++GYGFV F ++ E A+TEM G + +R +R AT
Sbjct: 181 -YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNA 239
Query: 257 --------------VSGQQQYP--KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
+G P +AS +++P+ TTV+VGNL V + L
Sbjct: 240 EEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELH 299
Query: 301 ELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
F G + V++ K GFV++++ A A++M NG + G+ I+ SWG P+
Sbjct: 300 RHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWGNKPT 358
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 30/205 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F+ + G + +GFV + D
Sbjct: 68 DPSTCRSVYVGNVHPNVTESLLIEVFQ-----SSGLVERCKLIRKEKSSFGFVDYYDRRS 122
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ ++G + + GQ +Y ++Q +D + +FVG
Sbjct: 123 AALAIMTLHG----------------RHICGQAIKVNWAYASTQ---REDTSGHFHIFVG 163
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L S V D L FS Y ++ + G FV F ++ AE A+ + G
Sbjct: 164 DLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 223
Query: 343 LGGQNIRLSWGRSPSNKQAQPDPNQ 367
LG + IR +W + ++ Q N
Sbjct: 224 LGSRQIRCNWATKNNAEEKQETDNH 248
>gi|449302198|gb|EMC98207.1| hypothetical protein BAUCODRAFT_416441 [Baudoinia compniacensis
UAMH 10762]
Length = 479
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 143/294 (48%), Gaps = 25/294 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY--GFIEFISRAGAERV 139
R L++G L + E L F TG V +VK+I +K Q +GY GF+E+ AER
Sbjct: 82 RALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDKNF-QSKGYNYGFVEYDDPQCAERA 140
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + +Q R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 141 MQTLNGRRV--HQQEIRVNWAYQSNTISKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 197
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---- 254
+ A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K
Sbjct: 198 GTVSEARVMWDMKTGRSRGYGFVSFRDRGDAEKALSSMDGEWLGSRAIRCNWANQKGQPS 257
Query: 255 --------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
T G +P Q+ ++ TT +VGNL T L
Sbjct: 258 YSQAQAMVQMGMTPTTPYGHHTFPTQGAQSFEMIVQQTPQWQTTCYVGNLTPYTTQNDLV 317
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF +G + + + + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 318 PLFQNFGYVTETRFHSDRGFAFVKMDTHENAANAICQLSGYNVNGRPLKCSWGK 371
>gi|222624283|gb|EEE58415.1| hypothetical protein OsJ_09609 [Oryza sativa Japonica Group]
Length = 261
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 115/205 (56%), Gaps = 38/205 (18%)
Query: 175 TIFVGDL-------------AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFV 221
T+++GDL A + DY+LQETFR YPS KGAKVV D TGR+KGYGFV
Sbjct: 17 TLWIGDLQYWADENYLYNCFAPNRRDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFV 76
Query: 222 RFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPN 281
+F DE+E+ RAMTEMNG++CSTRPMRI A KKT Q QY A D+
Sbjct: 77 KFADENEKNRAMTEMNGMYCSTRPMRISAAIPKKTTGSQLQYGAAK----------DNAA 126
Query: 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADR----SCAEEALRM 337
T+ + H + Q Q++ + K F Q R + AEEA++
Sbjct: 127 YITI-----HKCIIHFHRQPCIQQ--QVMQFR----KSNQFYQIVIRQTPLASAEEAVQR 175
Query: 338 LNGTQLGGQNIRLSWGRSPSNKQAQ 362
L+GT +G Q +RLSWGRSP++KQ +
Sbjct: 176 LHGTTIGQQVVRLSWGRSPASKQVE 200
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE--------------VVAVKVI 114
A P Q E+RTLWIGDLQYW DE YL CFA V KV+
Sbjct: 3 AAPYHQPTSLEEVRTLWIGDLQYWADENYLYNCFAPNRRDYLLQETFRVSYPSVKGAKVV 62
Query: 115 RNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
+ TG+ +GYGF++F R + NG
Sbjct: 63 TDPNTGRSKGYGFVKFADENEKNRAMTEMNG 93
>gi|410927733|ref|XP_003977295.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Takifugu rubripes]
Length = 304
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 109/177 (61%), Gaps = 8/177 (4%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ TLW+G+L+ +MDE ++ F+ GE VV+V++IRNK TG GY F+E A AER
Sbjct: 1 MSTLWMGNLETYMDEKFITRAFSTMGEQVVSVRIIRNKMTGGALGYCFVEMTDEATAERC 60
Query: 140 LQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
L+ NG +P F+LN A+FG K+D +++FVGDL +V D ML E F R
Sbjct: 61 LRKINGKSLPGASPPTRFKLNRATFG---KQDVGQMYSLFVGDLTPEVDDGMLYEFFYNR 117
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATN 253
YPS +G KVV+D + G +KG GFV+F DE Q RA+ E G V ++ +R+ A N
Sbjct: 118 YPSCRGGKVVLDSM-GNSKGCGFVQFPDERLQKRALDECQGAVGLGSKALRLSLAAN 173
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 28/219 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G+L + + + F +++ +++TG GY FV DE+ R +
Sbjct: 3 TLWMGNLETYMDEKFITRAFSTMGEQVVSVRIIRNKMTGGALGYCFVEMTDEATAERCLR 62
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
++NG + P P K +A++ V Q ++FVG+L V
Sbjct: 63 KING---KSLPGASPPTRFKLN--------RATFGKQDVGQM------YSLFVGDLTPEV 105
Query: 295 TDEHLRELF------SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQN 347
D L E F + G++V + K CGFVQF D + AL G LG +
Sbjct: 106 DDGMLYEFFYNRYPSCRGGKVVLDSMGNSKGCGFVQFPDERLQKRALDECQGAVGLGSKA 165
Query: 348 IRLSWG----RSPSNKQAQPDPNQWNAGYYGYAQGYENY 382
+RLS R+ +Q++ Q ++GY G Y Y
Sbjct: 166 LRLSLAANNLRNRQPQQSETRAAQPSSGYRGDYDQYSQY 204
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYG-QLVHVKIPAGKRCG------FVQFADRSCAEEAL 335
+T+++GNL++ + ++ + FS G Q+V V+I K G FV+ D + AE L
Sbjct: 2 STLWMGNLETYMDEKFITRAFSTMGEQVVSVRIIRNKMTGGALGYCFVEMTDEATAERCL 61
Query: 336 RMLNGTQLGGQN--IRLSWGRSPSNKQ 360
R +NG L G + R R+ KQ
Sbjct: 62 RKINGKSLPGASPPTRFKLNRATFGKQ 88
>gi|448523083|ref|XP_003868848.1| hypothetical protein CORT_0C05700 [Candida orthopsilosis Co 90-125]
gi|380353188|emb|CCG25944.1| hypothetical protein CORT_0C05700 [Candida orthopsilosis]
Length = 444
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 145/288 (50%), Gaps = 17/288 (5%)
Query: 84 LWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+W+GDL W +E+ + A +VK++R++ Y F+ F + + LQ
Sbjct: 79 MWMGDLDPSWTEESIHSIWSALVQPPKSVKIMRDRLNPSKPSYCFVTFEDQEALDWALQR 138
Query: 143 FNGTPMPNGEQNFRLNWASF--------GAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
NG +PN ++ F+++ AS G+G R T + ++F+GDLA DV + L TF
Sbjct: 139 -NGQLIPNSQRKFKISHASAKNSTSGGAGSGHSRQSTGEFSLFIGDLAQDVGEAALYSTF 197
Query: 195 RARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
+YP+ K A+V++D+ + KG+GFV+F +A+ EM GV ++ +R+G A
Sbjct: 198 NLKYPNQIKSARVIVDQDSKVGKGFGFVKFFTGEVMEKALKEMQGVMVGSKTIRVGIAAG 257
Query: 254 KKTVSGQQQYPKASYQNSQVAQSD------DDPNNTTVFVGNLDSIVTDEHLRELFSQYG 307
+ V K Y+ + QS D NT + + L S T+ L +F +G
Sbjct: 258 SEVVQSSSHANKPDYKKIPITQSQPELEAGTDEKNTNISISGLSSKFTESELELMFLTFG 317
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
LV+ K+ + G+V+F R+ AE A+ L + + G + L+WG S
Sbjct: 318 DLVYCKLSRDLQRGYVKFVSRNAAELAMAHLTSSVVNGCRLDLTWGSS 365
>gi|212538449|ref|XP_002149380.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069122|gb|EEA23213.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 424
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 142/294 (48%), Gaps = 25/294 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG--YGFIEFISRAGAERV 139
R L+IG L + E L F TG V +VK+I +K Q +G YGF+E+ AER
Sbjct: 91 RALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDKNF-QSKGMNYGFVEYDDPGAAERA 149
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNNTHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 206
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F + + +A+ M+ + +R +R A K S
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQPS 266
Query: 259 ------------------GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
G +P + + + TT +VGNL T L
Sbjct: 267 ISQQQAMAAMGMTPTAPFGHHHFPTHGANSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLV 326
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF +G +V ++ A + F++ A A+ LNG Q+ G+ ++ SWG+
Sbjct: 327 PLFQNFGYVVETRLQADRGFAFLKMDTHENAAMAICQLNGYQVNGRPLKCSWGK 380
>gi|344302744|gb|EGW33018.1| hypothetical protein SPAPADRAFT_60343 [Spathaspora passalidarum
NRRL Y-27907]
Length = 457
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 155/293 (52%), Gaps = 25/293 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+GDL E ++ +A E V+VK+IR+K GY F+ F ++ + +Q
Sbjct: 91 LWMGDLDSNWTEEAIDYIWASLVEKPVSVKIIRDKLNPTKPGYCFVTFNNQKSVDLAMQR 150
Query: 143 FNGTPMPNGEQNFRLNWASFG---------AGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
NG P+P+ + F+LN+AS G A D + D ++FVGDL +V++ +L
Sbjct: 151 -NGQPVPSSNKYFKLNYASGGGHGGGQSRHAASGGDSSNDFSMFVGDLGHEVSEALLFNK 209
Query: 194 FRARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F +YP+ K KV+ID T ++KG+GFVRF + RA+ EMNGV ++ +R+G A+
Sbjct: 210 FNHKYPNQIKHVKVIIDPTTKKSKGFGFVRFLNGEALNRALQEMNGVEIGSKAIRVGLAS 269
Query: 253 NKKTVSGQQQYPKAS-----YQNSQVAQSDDDPN------NTTVFVGNLDSIVTDEHLRE 301
Q+ P +S Y+ V Q D N NT++ + L S T+ L
Sbjct: 270 GASV--DIQKGPTSSQGTVDYRRVVVPQPQPDLNQYTDYDNTSLVIKGLASKFTERELEM 327
Query: 302 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
F +G L+H K+ + + G++++ RS AE A+ ++G+ + + ++WG+
Sbjct: 328 YFIGFGDLIHCKLSSDFQTGYIKYYLRSSAESAILYMHGSTINDCRLTINWGK 380
>gi|82400162|gb|ABB72820.1| oligouridylate binding protein-like protein [Solanum tuberosum]
Length = 417
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 152/296 (51%), Gaps = 24/296 (8%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L F+ TG V K+IR +++ YGFI + R A
Sbjct: 50 PSTCRSVFVGNIHPQVTEPLLQEVFSSTGLVEGCKLIRKEKSS----YGFIHYYDRRSAA 105
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA F +G++ D + IFVGDL+ +VTD ML F
Sbjct: 106 LAIVSLNGRHLFG--QPIKVNWA-FASGQREDTSSHFNIFVGDLSPEVTDAMLFACFSV- 161
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
YP A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT
Sbjct: 162 YPGCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGANS 221
Query: 258 SGQQQYPKA---------SYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFS 304
+ +Q A S ++ + A + D P N TTV+VGN+ VT L F
Sbjct: 222 NDDKQSSDAKSVVELTNGSSEDGKEAANSDAPENNPQYTTVYVGNIAPEVTQLDLHRYFH 281
Query: 305 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 357
G V ++I K GFV++ + A A++M N + LGG+ I+ SWG P+
Sbjct: 282 ALGAGVIEEIRIQRDKGFGFVRYNTHAEAALAIQMGNTHSVLGGRQIKCSWGNKPT 337
>gi|403335112|gb|EJY66726.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 588
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 108/204 (52%), Gaps = 27/204 (13%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-----GYGFIEFISR 133
G +TLWIGD++ WMDE Y+ F +V+ +K+I+NK + GYGF+EF S
Sbjct: 96 GGSKTLWIGDIENWMDEQYVINLFQGIAQVMNIKLIKNKDNRKNSSAPQFGYGFVEFTSH 155
Query: 134 AGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDD---------------------T 171
A+ + T NG +P+ +NF+LNWAS +
Sbjct: 156 EIAKSIFTTLNGASIPSLPNKNFKLNWASHQVAYNKTSYQNYQNNGHAQNYSNHQGSRKQ 215
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
++ I+VGDL +V D ML TF+ RYPS AKV++D +T ++K YGFV+FG E
Sbjct: 216 EEYQIYVGDLDPNVNDQMLMITFQKRYPSVNQAKVIMDPITRQSKCYGFVKFGIIEEGQN 275
Query: 232 AMTEMNGVFCSTRPMRIGPATNKK 255
AM EM G T+ M+I A+ KK
Sbjct: 276 AMAEMQGKLLLTKAMKINHASQKK 299
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC-----------GFVQFADRSCAE 332
T+++G++++ + ++++ LF Q++++K+ K GFV+F A+
Sbjct: 100 TLWIGDIENWMDEQYVINLFQGIAQVMNIKLIKNKDNRKNSSAPQFGYGFVEFTSHEIAK 159
Query: 333 EALRMLNGT---QLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENY 382
LNG L +N +L+W S++ A + N G+AQ Y N+
Sbjct: 160 SIFTTLNGASIPSLPNKNFKLNWA---SHQVAYNKTSYQNYQNNGHAQNYSNH 209
>gi|348531393|ref|XP_003453194.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Oreochromis niloticus]
Length = 360
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 111/175 (63%), Gaps = 7/175 (4%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL +MDE ++ F+ GE VK+I ++ TG GY F+E A ER +Q
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSAMGESPFGVKIITHRITGGSAGYCFVELADEASVERCVQ 66
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +P + F+LN+A++G ++ + P+ ++FVGDLA+++ D+ L + F+ +YP
Sbjct: 67 RLNGKLVPGSNPPRKFKLNYATYG--KRPEAGPEFSVFVGDLASEIDDFQLHQVFK-KYP 123
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
S KGAKVV D+ G ++GYGFV+FG+ESEQ +A+ E G +P+R+ A K
Sbjct: 124 SCKGAKVVTDQY-GYSRGYGFVKFGEESEQKKAIEECQGTMLGGKPLRLSIAVAK 177
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 110/250 (44%), Gaps = 48/250 (19%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + +++ F A S G K++ R+TG + GY FV DE+ R +
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSAMGESPFGVKIITHRITGGSAGYCFVELADEASVERCVQ 66
Query: 235 EMNGVFCST----RPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNL 290
+NG R ++ AT K P+A + S VFVG+L
Sbjct: 67 RLNGKLVPGSNPPRKFKLNYATYGKR-------PEAGPEFS-------------VFVGDL 106
Query: 291 DSIVTDEHLRELFSQY-----GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
S + D L ++F +Y ++V + + GFV+F + S ++A+ GT LGG
Sbjct: 107 ASEIDDFQLHQVFKKYPSCKGAKVVTDQYGYSRGYGFVKFGEESEQKKAIEECQGTMLGG 166
Query: 346 QNIRLSWGRSPSNKQA----------QPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY 395
+ +RLS + S K + Q + NQ +GYYG G Q
Sbjct: 167 KPLRLSIAVAKSQKMSSYHGGQGQNYQSNYNQTQSGYYGSHSG---------GSQGYYSQ 217
Query: 396 YGGYPGYGNY 405
+GGY YG Y
Sbjct: 218 WGGYDQYGGY 227
>gi|357466551|ref|XP_003603560.1| RNA-binding protein [Medicago truncatula]
gi|355492608|gb|AES73811.1| RNA-binding protein [Medicago truncatula]
Length = 414
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 147/294 (50%), Gaps = 26/294 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + + L F G + K+IR +++ YGF+++ RA A +
Sbjct: 33 CRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASAALAI 88
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T +G + Q ++NWA A R+DT H +FVGDL+ +VTD L F Y
Sbjct: 89 MTLHGRQLYG--QALKVNWAY--ANSSREDTSGHFNVFVGDLSPEVTDATLFACFSV-YT 143
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI-------GPAT 252
+ A+V+ D TGR+KGYGFV F D + A+ +M G + R +R G ++
Sbjct: 144 TCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSS 203
Query: 253 NKKTVSGQQQ---YPKASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQ 305
N++ ++ Q S Q ++D P N TTV+VGNL VT L F
Sbjct: 204 NEEKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYTTVYVGNLPHDVTQAELHCQFHA 263
Query: 306 YGQ--LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G L V++ +GK GFV++ A A++M NG + G+ ++ SWG P+
Sbjct: 264 LGAGVLEEVRVQSGKGFGFVRYNTHEEAAMAIQMANGRPVRGKTMKCSWGSKPT 317
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 30/190 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VTD +L E F++ P G K++ YGFV + D +
Sbjct: 29 DASACRSVYVGNIHVNVTDKLLAEVFQSAGP-LAGCKLIRK----EKSSYGFVDYHDRAS 83
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ ++G + + GQ +Y NS +D + VFVG
Sbjct: 84 AALAIMTLHG----------------RQLYGQALKVNWAYANS---SREDTSGHFNVFVG 124
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ K GFV F D A+ A+ + G
Sbjct: 125 DLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKW 184
Query: 343 LGGQNIRLSW 352
LG + IR +W
Sbjct: 185 LGNRQIRCNW 194
>gi|6996560|emb|CAB75429.1| oligouridylate binding protein [Nicotiana plumbaginifolia]
Length = 406
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 146/293 (49%), Gaps = 25/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L FA TG + K+IR ++ YGF+++ R A +
Sbjct: 48 CRSVYVGNIHPQVTEPLLQEVFASTGPLEGCKLIRKDKSS----YGFVDYFDRRSAALAI 103
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T NG + Q ++NWA A +R+DT +H IFVGDL+ +VTD L F Y
Sbjct: 104 VTLNGRHLFG--QPIKVNWAY--ASAQREDTSNHYNIFVGDLSPEVTDATLFACFSV-YT 158
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S A+V+ D+ TGR++G+GFV F ++ E A+ ++NG + +R +R A G
Sbjct: 159 SCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGKWLGSRQIRCNWAAKGAGAVG 218
Query: 260 QQQYPKASYQNSQVAQSDD-------------DPNNTTVFVGNLDSIVTDEHLRELFSQY 306
+Q S SDD +P TTV+VGNL VT L F
Sbjct: 219 EQNSDAKSVVELTSGTSDDGQEKVVNEDAPENNPQYTTVYVGNLAPEVTSVDLHRHFHAL 278
Query: 307 GQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G V V+I K GFV+++ + A A+++ N L G+ ++ SWG P+
Sbjct: 279 GAGVIEDVRIQRDKGFGFVRYSSHAEAARAIQLGNARLLFGKPVKCSWGSKPT 331
>gi|356515545|ref|XP_003526460.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 435
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 143/294 (48%), Gaps = 26/294 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + + L F G + K+IR +++ YGF+++ RA A +
Sbjct: 55 CRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASAALAI 110
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T +G + Q ++NWA A R+DT H IFVGDL+ +VTD L F YP
Sbjct: 111 MTLHGRQLYG--QALKVNWAY--ANSSREDTTGHFNIFVGDLSPEVTDATLFACFSV-YP 165
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S A+V+ D TGR+KGYGFV F D + A+ +M G + R +R AT S
Sbjct: 166 SCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSS 225
Query: 260 QQQ----------YPKASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQ 305
++ S Q ++D P N TTV+VGNL VT L F
Sbjct: 226 NEEKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTTVYVGNLPHDVTQAELHCQFHA 285
Query: 306 YGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G V V++ K GF+++ A A++M NG + G+N++ SWG P+
Sbjct: 286 LGAGVIEEVRVQRDKGFGFIRYNTHDEAALAIQMANGRLVRGKNMKCSWGSKPT 339
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 30/204 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VTD +L E F++ P G K++ YGFV + D +
Sbjct: 51 DTSACRSVYVGNIHVNVTDKLLAEVFQSAGP-LAGCKLI----RKEKSSYGFVDYHDRAS 105
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ ++G + + GQ +Y NS +D + +FVG
Sbjct: 106 AALAIMTLHG----------------RQLYGQALKVNWAYANSS---REDTTGHFNIFVG 146
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ K GFV F D A+ A+ + G
Sbjct: 147 DLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKW 206
Query: 343 LGGQNIRLSWGRSPSNKQAQPDPN 366
LG + IR +W + + + N
Sbjct: 207 LGNRQIRCNWATKGAGGSSNEEKN 230
>gi|357466549|ref|XP_003603559.1| RNA-binding protein [Medicago truncatula]
gi|355492607|gb|AES73810.1| RNA-binding protein [Medicago truncatula]
Length = 440
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 147/294 (50%), Gaps = 26/294 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + + L F G + K+IR +++ YGF+++ RA A +
Sbjct: 59 CRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASAALAI 114
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T +G + Q ++NWA A R+DT H +FVGDL+ +VTD L F Y
Sbjct: 115 MTLHGRQLYG--QALKVNWAY--ANSSREDTSGHFNVFVGDLSPEVTDATLFACFSV-YT 169
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI-------GPAT 252
+ A+V+ D TGR+KGYGFV F D + A+ +M G + R +R G ++
Sbjct: 170 TCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSS 229
Query: 253 NKKTVSGQQQ---YPKASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQ 305
N++ ++ Q S Q ++D P N TTV+VGNL VT L F
Sbjct: 230 NEEKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYTTVYVGNLPHDVTQAELHCQFHA 289
Query: 306 YGQ--LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G L V++ +GK GFV++ A A++M NG + G+ ++ SWG P+
Sbjct: 290 LGAGVLEEVRVQSGKGFGFVRYNTHEEAAMAIQMANGRPVRGKTMKCSWGSKPT 343
>gi|209735818|gb|ACI68778.1| tRNA selenocysteine-associated protein 1 [Salmo salar]
gi|303668652|gb|ADM16309.1| tRNA selenocysteine-associated protein 1 SECp43 [Salmo salar]
Length = 301
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 112/178 (62%), Gaps = 7/178 (3%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ TLW+G+L+ +MDE ++ F GE VV+V++IRNK TG GY F+E A AER
Sbjct: 1 MSTLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGGAAGYCFVELTDEATAERC 60
Query: 140 LQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
L+ NG +P + F+LN A+FG ++ + +P +++FVGDL +V D ML E F R
Sbjct: 61 LRKVNGKALPGATPPRRFKLNRATFG--KQGESSPLYSLFVGDLTPEVDDGMLYEFFYNR 118
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
YPS +G KVV+D TG +KG GFV+F D+ Q A+ E G V ++P+R+ A NK
Sbjct: 119 YPSCRGGKVVLDG-TGNSKGCGFVQFPDQRLQKLALEECQGAVGLGSKPLRLSLAANK 175
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G+L + + + F +++ +++TG GY FV DE+ R +
Sbjct: 3 TLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGGAAGYCFVELTDEATAERCLR 62
Query: 235 EMNGVFC--STRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDS 292
++NG +T P R N+ T G+Q Y ++FVG+L
Sbjct: 63 KVNGKALPGATPPRRF--KLNRATF-GKQGESSPLY---------------SLFVGDLTP 104
Query: 293 IVTDEHLRELF------SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGG 345
V D L E F + G++V K CGFVQF D+ + AL G LG
Sbjct: 105 EVDDGMLYEFFYNRYPSCRGGKVVLDGTGNSKGCGFVQFPDQRLQKLALEECQGAVGLGS 164
Query: 346 QNIRLSWGRSPSNKQAQPDPNQWNAGYYGY 375
+ +RLS + + + Q D W + GY
Sbjct: 165 KPLRLSLAANKT-RHNQSDNRGWGSHGGGY 193
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLV-HVKIPAGKRCG------FVQFADRSCAEEAL 335
+T+++GNL+ + + + F G+LV V+I K G FV+ D + AE L
Sbjct: 2 STLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGGAAGYCFVELTDEATAERCL 61
Query: 336 RMLNGTQLGGQN--IRLSWGRSPSNKQAQPDP 365
R +NG L G R R+ KQ + P
Sbjct: 62 RKVNGKALPGATPPRRFKLNRATFGKQGESSP 93
>gi|356565743|ref|XP_003551097.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 411
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 154/294 (52%), Gaps = 25/294 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
R++++G++ + ++ L F+ G + K+IR +++ YGF+++ R+ A
Sbjct: 44 SCRSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFA 99
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+ T NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L F Y
Sbjct: 100 IVTLNGRNIFG--QPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYACFSV-Y 154
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT + S
Sbjct: 155 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASAS 214
Query: 259 GQQQYPKA---------SYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQ 305
++Q + S ++ Q +DD P TTV+VGNL VT L + F
Sbjct: 215 DEKQTSDSRSVVELTNGSSEDGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHS 274
Query: 306 Y--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G + V++ K GFV+++ + A A++M N L G+ I+ SWG P+
Sbjct: 275 LNAGTIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWGSKPT 328
>gi|255647186|gb|ACU24061.1| unknown [Glycine max]
Length = 435
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 143/294 (48%), Gaps = 26/294 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + + L F G + K+IR +++ YGF+++ RA A +
Sbjct: 55 CRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASAALAI 110
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T +G + Q ++NWA A R+DT H IFVGDL+ +VTD L F YP
Sbjct: 111 MTLHGRQLYG--QALKVNWAY--ANSSREDTTGHFNIFVGDLSPEVTDATLFACFSV-YP 165
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S A+V+ D TGR+KGYGFV F D + A+ +M G + R +R AT S
Sbjct: 166 SCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSS 225
Query: 260 QQQ----------YPKASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQ 305
++ S Q ++D P N TTV+VGNL VT L F
Sbjct: 226 NEEKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTTVYVGNLPHDVTQAELHCQFHA 285
Query: 306 YGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G V V++ K GF+++ A A++M NG + G+N++ SWG P+
Sbjct: 286 LGAGVIEEVRVQRDKGFGFIRYNTHDEAALAIQMANGRLVRGKNMKCSWGSKPT 339
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 30/204 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VTD +L E F++ P G K++ YGFV + D +
Sbjct: 51 DTSACRSVYVGNIHVNVTDKLLAEVFQSAGP-LAGCKLI----RKEKSSYGFVDYHDRAS 105
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ ++G + + GQ +Y NS +D + +FVG
Sbjct: 106 AALAIMTLHG----------------RQLYGQALKVNWAYANSS---REDTTGHFNIFVG 146
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ K GFV F D A+ A+ + G
Sbjct: 147 DLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKW 206
Query: 343 LGGQNIRLSWGRSPSNKQAQPDPN 366
LG + IR +W + + + N
Sbjct: 207 LGNRQIRCNWATKGAGGSSNEEKN 230
>gi|225429862|ref|XP_002283326.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 436
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 146/293 (49%), Gaps = 23/293 (7%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
R++++G++ + E L F G + K+IR ++ YGF++++ RA A
Sbjct: 56 SCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSS----YGFVDYLDRASASLA 111
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+ T +G + Q ++NWA + +G++ D + IFVGDL+ +VTD L F +
Sbjct: 112 IMTLHGRQVYG--QALKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLYACFSV-FA 167
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT------- 252
S A+V+ D TGR+KGYGFV F ++ + A+ +++G + R +R AT
Sbjct: 168 SCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIRCNWATKGAGFNE 227
Query: 253 ------NKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 306
N+ V S +N+ +++P TTV+VGNL VT L F
Sbjct: 228 DKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHEVTQAELHCQFHAL 287
Query: 307 GQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G V V+I K GFV++ A A++M NG + G++++ SWG P+
Sbjct: 288 GAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSKPT 340
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 335
D + +V+VGN+ VT++ L E+F G L K+ + GFV + DR+ A A+
Sbjct: 53 DSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSSYGFVDYLDRASASLAI 112
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQ 360
L+G Q+ GQ ++++W + ++
Sbjct: 113 MTLHGRQVYGQALKVNWAYASGQRE 137
>gi|255550383|ref|XP_002516242.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223544728|gb|EEF46244.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 358
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 157/292 (53%), Gaps = 26/292 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + E L F++TG + K+IR +++ YGF+++ R A +
Sbjct: 44 RSVYVGNIHPQVTEPLLQEVFSNTGLIEGCKLIRKEKSS----YGFVDYFDRRSAALSIV 99
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L +F A +PS
Sbjct: 100 TLNGRHLFG--QPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYASF-ALFPS 154
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A+V+ D+ TGR++G+GFV F ++ + A+ E+NG + +R +R A T +
Sbjct: 155 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWIGSRQIRCNWAAKGTTSNDD 214
Query: 261 QQYPKA---------SYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY- 306
+Q A + ++SQ ++DD P N TTV+VGNL VT L F
Sbjct: 215 KQSSDAKSVVELTNGTSEDSQ-EKNDDAPENNPQYTTVYVGNLAPEVTSVDLHRHFYGLG 273
Query: 307 -GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G + V++ K GFV+++ + A A++M N L G+ ++ SWG P+
Sbjct: 274 AGTIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILYGKPVKCSWGSKPT 325
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 335
D +V+VGN+ VT+ L+E+FS G + K+ ++ GFV + DR A ++
Sbjct: 39 DSTTCRSVYVGNIHPQVTEPLLQEVFSNTGLIEGCKLIRKEKSSYGFVDYFDRRSAALSI 98
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQ 360
LNG L GQ I+++W + S ++
Sbjct: 99 VTLNGRHLFGQPIKVNWAYASSQRE 123
>gi|299755830|ref|XP_001828914.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|298411401|gb|EAU92921.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 20/291 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + + +FVGDL+ +V D +L + F A + +
Sbjct: 77 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDEVLGKAFSA-FGTL 133
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGAPG 193
Query: 262 QYPKAS----------YQNS----QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 307
+ S +Q + + P NTTV+VGNL T L LF G
Sbjct: 194 GGARPSAGGGAPAPVNFQGGPLTYEQVLAQTAPYNTTVYVGNLVPYTTQADLIPLFQSIG 253
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
L +++ A + FV+ A +A+ L G + G+ I+ SWG+ ++
Sbjct: 254 YLSEIRMQADRGFAFVKLDTHEHAAQAIVQLQGQMVHGRPIKCSWGKDRAD 304
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSCAE 332
P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D AE
Sbjct: 13 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAE 72
Query: 333 EALRMLNGTQLGGQNIRLSW 352
AL+ LNG ++ IR++W
Sbjct: 73 TALQTLNGRKIFDTEIRVNW 92
>gi|451997861|gb|EMD90326.1| hypothetical protein COCHEDRAFT_1106708 [Cochliobolus
heterostrophus C5]
Length = 455
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 144/314 (45%), Gaps = 38/314 (12%)
Query: 76 GQPGEI----------RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-- 123
GQPG + R L++G L + E L F TG V +VK+I +K
Sbjct: 36 GQPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFN 95
Query: 124 ----GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFV 178
YGF+E+ AER + T NG + N E R+NWA ++DT +H IFV
Sbjct: 96 SKGFNYGFVEYDDPGAAERGMATLNGRRIHNNE--IRVNWAYQSNNTAKEDTSNHFHIFV 153
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL+ +V D +L + F P ++ A+V+ D TGR++GYGFV F D ++ RA+ M+G
Sbjct: 154 GDLSNEVNDEVLLQAFSTFGPVSE-ARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDG 212
Query: 239 VFCSTRPMRIGPATNK------------------KTVSGQQQYPKASYQNSQVAQSDDDP 280
+ +R +R A K T G +P Q+ + +
Sbjct: 213 EWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQ 272
Query: 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 340
TT +VGNL + L LF +G + + + + F++ A A+ LNG
Sbjct: 273 WQTTCYVGNLTPYTSQADLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNG 332
Query: 341 TQLGGQNIRLSWGR 354
+ G+ ++ SWG+
Sbjct: 333 YNVNGRPLKCSWGK 346
>gi|255576617|ref|XP_002529199.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223531377|gb|EEF33213.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 422
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 153/296 (51%), Gaps = 24/296 (8%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V + K+IR +++ YGFI + R A
Sbjct: 49 PSTCRSVYVGNIHTQVTEPLLQEVFASTGPVESCKLIRKEKSS----YGFIHYFDRRSAA 104
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + + IFVGDL+ +VTD L F
Sbjct: 105 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSGHYNIFVGDLSPEVTDATLFACFSV- 160
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y S A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT T
Sbjct: 161 YHSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGATS 220
Query: 258 SGQQQYPKA----------SYQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFS 304
+ +Q A S + + A +D NN TTV+VGNL VT L F
Sbjct: 221 NDDKQSSDAKSVVELTNGSSEEGKETANNDAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 280
Query: 305 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 357
G V V++ K GFV+F+ + A A++M N + L G+ I+ SWG P+
Sbjct: 281 SLGAGVIEEVRVQRDKGFGFVRFSTHAEAALAIQMGNTQSILYGKQIKCSWGSKPT 336
>gi|398407815|ref|XP_003855373.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
gi|339475257|gb|EGP90349.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
Length = 401
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 144/295 (48%), Gaps = 26/295 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG--YGFIEFISRAGAERV 139
R L++G L + E L F TG V VK+I +K Q +G YGF+E+ AER
Sbjct: 69 RALYVGGLDPRVTEDVLKQIFETTGHVQNVKIIPDKNF-QSKGFNYGFVEYDDPGAAERA 127
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + +Q R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 128 MQTLNGRRV--HQQEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 184
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ A+V+ D TGR++GYGFV F D ++ +A++ M+G + +R +R A K S
Sbjct: 185 GTVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPS 244
Query: 259 -------------------GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 299
G +P Q+ ++ TT +VGNL T L
Sbjct: 245 FSQQQAMVQMGMTPTTPYGGHHSFPTQGAQSYEMIVQQTPQWQTTCYVGNLTPYTTQNDL 304
Query: 300 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF +G + + + + F++ A A+ L+G Q+ G+ ++ SWG+
Sbjct: 305 VPLFQNFGYVTETRFQSDRGFAFIKMDTHENAANAICQLSGYQVNGRPLKCSWGK 359
>gi|356559021|ref|XP_003547800.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 416
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 154/295 (52%), Gaps = 23/295 (7%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V A K+IR ++ YGFI + R A
Sbjct: 49 PSTCRSVYVGNIHTQVTEPLLQEVFAGTGPVEACKLIRKDKSS----YGFIHYFDRRSAA 104
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + + IFVGDL+ +VTD L F
Sbjct: 105 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSGHYNIFVGDLSPEVTDATLFACFSV- 160
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN---- 253
YP+ A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT
Sbjct: 161 YPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGG 220
Query: 254 --KKTVSGQQQYPKASYQNS---QVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQ 305
+K S + + +Y +S + + SD NN TTV+VGNL T L F
Sbjct: 221 TEEKQNSDAKSVVELTYGSSDGKETSNSDAPENNPQYTTVYVGNLAPEATQLDLHHHFHS 280
Query: 306 YGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 357
G V V++ K GFV+++ + A A++M N + L G+ I+ SWG P+
Sbjct: 281 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSLLCGKQIKCSWGSKPT 335
>gi|223948725|gb|ACN28446.1| unknown [Zea mays]
gi|414869520|tpg|DAA48077.1| TPA: mRNA 3-UTR binding protein [Zea mays]
Length = 446
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 150/299 (50%), Gaps = 28/299 (9%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E+ L F G V K+IR +++ +GF+++ R A
Sbjct: 67 PSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSAA 122
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ T +G + Q ++NWA A +R+DT H IFVGDL+++V D L F A
Sbjct: 123 LAIMTLHGRHVYG--QAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA 178
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS A+V+ D TGR++GYGFV F ++ E A+TEM G + +R +R AT +
Sbjct: 179 -YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNS 237
Query: 257 VSGQQQ-------YPKASYQNSQVAQSDD---------DPNNTTVFVGNLDSIVTDEHLR 300
+ S NS S D +P+ TTV+VGNL V + L
Sbjct: 238 EEKPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQNNPDCTTVYVGNLGHEVNRDELH 297
Query: 301 ELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
F G + V++ K GFV+++ A A++M NG+ + G+ I+ SWG P+
Sbjct: 298 RHFYNLGVGAIEEVRVQQDKGFGFVRYSTHGEAALAIQMSNGSVVRGKPIKCSWGVKPT 356
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F+ + G + +GFV + D
Sbjct: 66 DPSTCRSVYVGNVNPNVTESLLIEVFQ-----SAGLVERCKLIRKEKSSFGFVDYYDRRS 120
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ ++G + V GQ +Y ++Q +D + +FVG
Sbjct: 121 AALAIMTLHG----------------RHVYGQAIKVNWAYASTQ---REDTSGHFHIFVG 161
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L S V D L FS Y ++ + G FV F ++ AE A+ + G
Sbjct: 162 DLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 221
Query: 343 LGGQNIRLSWGRSPSNKQAQPDPNQWNA 370
LG + IR +W + +N + +P+ + NA
Sbjct: 222 LGSRQIRCNWA-TKNNSEEKPETDNHNA 248
>gi|224121456|ref|XP_002330832.1| predicted protein [Populus trichocarpa]
gi|222872634|gb|EEF09765.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 146/293 (49%), Gaps = 23/293 (7%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
R++++G++ + + L FA G + K+IR ++ YGF+++ R+ A
Sbjct: 34 SCRSVYVGNIHVNVTDKLLAEVFATAGPLAGCKLIRKDKSS----YGFVDYHDRSSAALA 89
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+ T +G + + ++NWA + +G++ D + IFVGDL+ +VTD L F +P
Sbjct: 90 IMTLHGRQLYG--EALKVNWA-YASGQREDTSGHFHIFVGDLSPEVTDATLYACFSV-FP 145
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT------- 252
S A+V+ D TGR+KGYGFV F ++ E A+ ++ G + R +R AT
Sbjct: 146 SCSDARVMWDHKTGRSKGYGFVSFRNQQEAQSAINDLTGKWLGNRQIRCNWATKGVGSNE 205
Query: 253 ------NKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 306
N+ V S +N+ +++P TTV+VGNL +VT L F
Sbjct: 206 DKQNSDNQNAVVLTNGSSAGSQENTNEEAPENNPAYTTVYVGNLSHVVTQAELHGNFHAL 265
Query: 307 GQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G V V++ K GFV++ A A++M NG + G+ ++ SWG P+
Sbjct: 266 GAGVIEEVRVQRDKGFGFVRYNTHEEAAFAIQMGNGKIVCGKPMKCSWGSKPT 318
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 36/209 (17%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VTD +L E F P + D+ YGFV + D S
Sbjct: 31 DSSSCRSVYVGNIHVNVTDKLLAEVFATAGPLAGCKLIRKDK-----SSYGFVDYHDRSS 85
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVA--QSDDDPNNTTVF 286
A+ T+ G+Q Y +A N A Q +D + +F
Sbjct: 86 AALAIM---------------------TLHGRQLYGEALKVNWAYASGQREDTSGHFHIF 124
Query: 287 VGNLDSIVTDEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNG 340
VG+L VTD L FS + ++ K GFV F ++ A+ A+ L G
Sbjct: 125 VGDLSPEVTDATLYACFSVFPSCSDARVMWDHKTGRSKGYGFVSFRNQQEAQSAINDLTG 184
Query: 341 TQLGGQNIRLSWGRS--PSNKQAQPDPNQ 367
LG + IR +W SN+ Q NQ
Sbjct: 185 KWLGNRQIRCNWATKGVGSNEDKQNSDNQ 213
>gi|242082185|ref|XP_002445861.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
gi|241942211|gb|EES15356.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
Length = 447
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 155/303 (51%), Gaps = 36/303 (11%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E+ L F G V K+IR +++ +GF+++ R A
Sbjct: 67 PSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSAA 122
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ T +G + Q ++NWA A +R+DT H IFVGDL+++V D L F A
Sbjct: 123 LAIMTLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA 178
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS A+V+ D TGR++GYGFV F ++ E A+TEM G + +R +R AT +
Sbjct: 179 -YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNS 237
Query: 257 VSGQQQYPKASYQNSQVAQS--------------------DDDPNNTTVFVGNLDSIVT- 295
++ P+ N+ V + +++P+ TTV+VGNL V
Sbjct: 238 ----EEKPETDNHNAVVLTNGSSSNSATDASQDGGSKENPENNPDCTTVYVGNLGHEVNR 293
Query: 296 DEHLRELFSQ-YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
DE R +S G + +++ K GFV+++ A A++M NG + G+ I+ SWG
Sbjct: 294 DELHRHFYSLGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMGNGLVVRGKPIKCSWGN 353
Query: 355 SPS 357
P+
Sbjct: 354 KPT 356
>gi|432916416|ref|XP_004079326.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Oryzias
latipes]
Length = 345
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 110/175 (62%), Gaps = 7/175 (4%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL +MDE ++ F+ GE VK+I ++ TG GY F+E +R +Q
Sbjct: 8 SLWMGDLDPYMDENFIKQAFSAMGESPCGVKIITHRITGGSAGYCFVELADEESVDRCVQ 67
Query: 142 TFNG--TPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P N + F+LN+A++G ++ + P+ ++FVGDLA+++ D+ L + F+ +YP
Sbjct: 68 RLNGKLVPASNPPRKFKLNYATYG--KRPEAGPEFSVFVGDLASEIDDFQLHQVFK-KYP 124
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
S KGAKVV D+ G ++GYGFV+FG+ESEQ +A+ E G +P+R+ A K
Sbjct: 125 SCKGAKVVTDQY-GYSRGYGFVKFGEESEQKKAIEECQGTVLGGKPLRLSIAVAK 178
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 31/213 (14%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + +++ F A S G K++ R+TG + GY FV DE R +
Sbjct: 8 SLWMGDLDPYMDENFIKQAFSAMGESPCGVKIITHRITGGSAGYCFVELADEESVDRCVQ 67
Query: 235 EMNGVFCSTRPMRIGPATN-----KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGN 289
+NG ++ PA+N K + + P+A + S VFVG+
Sbjct: 68 RLNG--------KLVPASNPPRKFKLNYATYGKRPEAGPEFS-------------VFVGD 106
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQLG 344
L S + D L ++F +Y K+ + GFV+F + S ++A+ GT LG
Sbjct: 107 LASEIDDFQLHQVFKKYPSCKGAKVVTDQYGYSRGYGFVKFGEESEQKKAIEECQGTVLG 166
Query: 345 GQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQ 377
G+ +RLS + S K + Q + + Y+Q
Sbjct: 167 GKPLRLSIAVAKSQKVSNYQAGQGQSYHSNYSQ 199
>gi|357479379|ref|XP_003609975.1| RNA-binding protein [Medicago truncatula]
gi|355511030|gb|AES92172.1| RNA-binding protein [Medicago truncatula]
Length = 404
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 152/291 (52%), Gaps = 23/291 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + E L F+ G + K+IR +++ YGF+++ R+ A +
Sbjct: 46 RSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSS----YGFVDYFDRSSAAIAIV 101
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + Q+ ++NWA + G++ D + IFVGDL+ +VTD L F A Y S
Sbjct: 102 TLNGRNIFG--QSIKVNWA-YTRGQREDTSGHFHIFVGDLSPEVTDATLYACFSA-YSSC 157
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D+ TGR++G+GFV F ++ E A+ ++ G + +R +R AT ++G+
Sbjct: 158 SDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWATKGANMNGEN 217
Query: 262 QYPKA---------SYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY-- 306
Q ++ + + +Q SDD P TTV+VGNL VT L F
Sbjct: 218 QSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEVTSVDLHHHFHALGV 277
Query: 307 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G + V++ K GFV+++ A A++M N L G+ I+ SWG P+
Sbjct: 278 GTIEDVRVQRDKGFGFVRYSTHGEAALAIQMGNTRFLFGKPIKCSWGSKPT 328
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 30/200 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ V++ +LQE F S+ GA + YGFV + D S
Sbjct: 41 DSSTCRSVYVGNIHPQVSEPLLQELF-----SSAGALEGCKLIRKEKSSYGFVDYFDRSS 95
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG + + GQ +Y Q +D + +FVG
Sbjct: 96 AAIAIVTLNG----------------RNIFGQSIKVNWAYTR---GQREDTSGHFHIFVG 136
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ G FV F ++ A+ A+ L G
Sbjct: 137 DLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKW 196
Query: 343 LGGQNIRLSWGRSPSNKQAQ 362
LG + IR +W +N +
Sbjct: 197 LGSRQIRCNWATKGANMNGE 216
>gi|296081803|emb|CBI20808.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 146/293 (49%), Gaps = 23/293 (7%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
R++++G++ + E L F G + K+IR ++ YGF++++ RA A
Sbjct: 17 SCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSS----YGFVDYLDRASASLA 72
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+ T +G + Q ++NWA + +G++ D + IFVGDL+ +VTD L F +
Sbjct: 73 IMTLHGRQVYG--QALKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLYACFSV-FA 128
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT------- 252
S A+V+ D TGR+KGYGFV F ++ + A+ +++G + R +R AT
Sbjct: 129 SCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIRCNWATKGAGFNE 188
Query: 253 ------NKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 306
N+ V S +N+ +++P TTV+VGNL VT L F
Sbjct: 189 DKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHEVTQAELHCQFHAL 248
Query: 307 GQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G V V+I K GFV++ A A++M NG + G++++ SWG P+
Sbjct: 249 GAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSKPT 301
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 32/207 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F++ P + D+ YGFV + D +
Sbjct: 14 DSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDK-----SSYGFVDYLDRAS 68
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ ++G + V GQ +Y + Q +D + +FVG
Sbjct: 69 ASLAIMTLHG----------------RQVYGQALKVNWAYAS---GQREDTSGHFNIFVG 109
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS + ++ K GFV F ++ A+ A+ L+G
Sbjct: 110 DLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKW 169
Query: 343 LGGQNIRLSWGRSPS--NKQAQPDPNQ 367
LG + IR +W + N+ Q + NQ
Sbjct: 170 LGNRQIRCNWATKGAGFNEDKQVNENQ 196
>gi|358397912|gb|EHK47280.1| hypothetical protein TRIATDRAFT_165657, partial [Trichoderma
atroviride IMI 206040]
Length = 465
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 143/305 (46%), Gaps = 23/305 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K YGF+E+ A+R +
Sbjct: 76 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYN-YGFVEYDDPGAADRAMA 134
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 135 TLNGRRVHQSE--IRVNWAYQSNTTTKEDTSNHFHIFVGDLSNEVNDDILHQAFSA-FGS 191
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K
Sbjct: 192 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 251
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G Q+P + ++ + TT +VGNL T + L
Sbjct: 252 QQQAMQAMGMTPTTPFGHHQFPAHGIASYEMILAQTPNWQTTCYVGNLTPYTTHTDVVPL 311
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
F +G +V + A + F++ A A+ +NG + G+ ++ SWG+ +
Sbjct: 312 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTPNSQS 371
Query: 363 PDPNQ 367
DP Q
Sbjct: 372 FDPQQ 376
>gi|318037555|ref|NP_001188239.1| tRNA selenocysteine 1-associated protein 1-like [Ictalurus
punctatus]
gi|308324633|gb|ADO29451.1| tRNA selenocysteine 1-associated protein 1-like [Ictalurus
punctatus]
Length = 315
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 110/182 (60%), Gaps = 7/182 (3%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +LW+GDL +MDE ++ F+ GE VK+I ++ TG GY F+E A +R
Sbjct: 5 MTSLWMGDLDPYMDENFIKQAFSTMGETAYGVKIITHRVTGGSAGYCFVELADEASVDRC 64
Query: 140 LQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+Q NG +P N + F+LN+A++G ++ + P+ ++FVGDL +V DY L + F +
Sbjct: 65 VQRLNGKLVPGSNPPRKFKLNYATYG--KRPEPGPEFSVFVGDLTPEVDDYQLHQFFLKK 122
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTRPMRIGPATNKKT 256
YPS KGAKVV D G +KGYGFV+FGDESEQ +A+ E N + +RI A NK
Sbjct: 123 YPSCKGAKVVTDPY-GNSKGYGFVKFGDESEQKKALEEFQNATGLGGKAIRISIAVNKSN 181
Query: 257 VS 258
S
Sbjct: 182 KS 183
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 25/193 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + +++ F + G K++ R+TG + GY FV DE+ R +
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAYGVKIITHRVTGGSAGYCFVELADEASVDRCVQ 66
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPN-NTTVFVGNLDSI 293
+NG ++ P +N P+ N +P +VFVG+L
Sbjct: 67 RLNG--------KLVPGSNP---------PRKFKLNYATYGKRPEPGPEFSVFVGDLTPE 109
Query: 294 VTDEHLRELF-SQYGQLVHVKI---PAG--KRCGFVQFADRSCAEEALRML-NGTQLGGQ 346
V D L + F +Y K+ P G K GFV+F D S ++AL N T LGG+
Sbjct: 110 VDDYQLHQFFLKKYPSCKGAKVVTDPYGNSKGYGFVKFGDESEQKKALEEFQNATGLGGK 169
Query: 347 NIRLSWGRSPSNK 359
IR+S + SNK
Sbjct: 170 AIRISIAVNKSNK 182
>gi|354548091|emb|CCE44827.1| hypothetical protein CPAR2_406300 [Candida parapsilosis]
Length = 445
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 143/287 (49%), Gaps = 16/287 (5%)
Query: 84 LWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+W+GDL W +E+ ++K++R++ Y F+ F + + LQ
Sbjct: 81 MWMGDLDPSWTEESIYTMWSTLVAPPKSLKIMRDRLNPSKPSYCFVTFGDQEALDWALQR 140
Query: 143 FNGTPMPNGEQNFRLNWAS-------FGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFR 195
NG +P+ ++ F+L+ AS G G R T + ++FVGDLA DV++ L F
Sbjct: 141 -NGQMVPSTQRRFKLSHASARNNNPNVGGGSGRPSTGEFSLFVGDLAQDVSEAALYSKFN 199
Query: 196 ARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+YP+ K A+VVID+ + KG+GFV+F + RA+ EM GV ++ +R+G A
Sbjct: 200 LKYPNEIKSARVVIDQNSKLGKGFGFVKFFHSATMERALKEMQGVMLGSKAIRVGIAAGS 259
Query: 255 KTVSGQQQYPKASYQNSQVAQ------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQ 308
+T K + VAQ +D D NT + + L S T L +F +G
Sbjct: 260 ETTQTNHAQSKPDLKKLAVAQNQPELNADTDERNTNITISGLSSNFTARELELVFLSFGD 319
Query: 309 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
L++ K+ + G+V+F R+ AE A+ L+ T L + L+WG S
Sbjct: 320 LIYCKLSRDLQKGYVKFVSRNAAELAMTQLSDTVLHNCRLELTWGSS 366
>gi|30695647|ref|NP_849806.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|332194923|gb|AEE33044.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 430
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 159/320 (49%), Gaps = 36/320 (11%)
Query: 67 GVAVPPQQQ----------GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
GV PPQ + P R+++ G++ + E L FA TG + + K+IR
Sbjct: 38 GVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRK 97
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTI 176
++ YGF+ + R A + T NG + Q ++NWA + G++ D + I
Sbjct: 98 DKSS----YGFVHYFDRRCASMAIMTLNGRHIFG--QPMKVNWA-YATGQREDTSSHFNI 150
Query: 177 FVGDLAADVTDYMLQETFRARYPST---KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
FVGDL+ +VTD L ++F A + + A+V+ D+ TGR++G+GFV F ++ + A+
Sbjct: 151 FVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVSFRNQQDAQTAI 210
Query: 234 TEMNGVFCSTRPMRIGPAT-------NKKTVSGQQ--QYPKASYQNSQVAQSDDDPNN-- 282
EMNG + S+R +R AT +K + G+ + S ++ + ++D P N
Sbjct: 211 NEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNP 270
Query: 283 --TTVFVGNLDSIVTDEHLRELFSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRML 338
TTV+VGNL VT L LF G V V++ K GFV++ A A++M
Sbjct: 271 QFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMG 330
Query: 339 NGT-QLGGQNIRLSWGRSPS 357
N L + IR SWG P+
Sbjct: 331 NAQPFLFSRQIRCSWGNKPT 350
>gi|225444661|ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
Length = 429
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 152/302 (50%), Gaps = 36/302 (11%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L F+ TG + K+IR +++ YGF+++ R A +
Sbjct: 53 CRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSS----YGFVDYFDRRSAALSI 108
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L F YP
Sbjct: 109 VTLNGRHLFG--QPIKVNWAY--ASSQREDTSGHYNIFVGDLSPEVTDATLFACFSV-YP 163
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S A+V+ D+ TGR++G+GFV F ++ E A+ ++NG + +R +R AT K G
Sbjct: 164 SCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWLGSRQIRCNWAT--KGAGG 221
Query: 260 QQQYPKAS------------------YQNSQVAQSDDDPNN----TTVFVGNLDSIVTDE 297
+ P + QN + +D+ P N TTV+VGNL VT
Sbjct: 222 NEDKPNSDAKSVVELTNGTSGEVIYGIQNGKDKSNDEAPENNLQYTTVYVGNLAPEVTSV 281
Query: 298 HLRELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
L F G + V++ K GFV+++ + A A++M N L G+ I+ SWG
Sbjct: 282 DLHRHFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILCGKPIKCSWGSK 341
Query: 356 PS 357
P+
Sbjct: 342 PT 343
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 335
D +V+VGN+ VT+ L+E+FS G L K+ ++ GFV + DR A ++
Sbjct: 49 DSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSSYGFVDYFDRRSAALSI 108
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQ 360
LNG L GQ I+++W + S ++
Sbjct: 109 VTLNGRHLFGQPIKVNWAYASSQRE 133
>gi|224119532|ref|XP_002331184.1| predicted protein [Populus trichocarpa]
gi|222873305|gb|EEF10436.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 151/295 (51%), Gaps = 23/295 (7%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V K+IR +++ YGFI + R A
Sbjct: 54 PSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKEKSS----YGFIHYFDRRAAA 109
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + IFVGDL+ +VTD L F
Sbjct: 110 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLYACFSV- 165
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI-----GPAT 252
YPS A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R G ++
Sbjct: 166 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAAKGASS 225
Query: 253 NKKTVSGQQ----QYPKASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFS 304
N S + + ++ + A +++ P N TTV+VGNL V L F
Sbjct: 226 NDDKQSSDSKSVVELTNGTSEDCKEATNNEAPENNPQYTTVYVGNLAPEVAQPDLHRHFH 285
Query: 305 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G V V++ K GFV+F+ + A A++M N L G+ ++ SWG P+
Sbjct: 286 ALGAGVIEEVRVQRDKGFGFVRFSTHAEAALAIQMGNTQSLFGKQMKCSWGSKPT 340
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 145/285 (50%), Gaps = 19/285 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 73
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G+ K D + +FVGDL+ +V D +L + F A + +
Sbjct: 74 TLNGRKIFDTE--IRVNWAYQGSTAKEDTSGHFHVFVGDLSPEVNDAVLAKAFSA-FGTL 130
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT
Sbjct: 131 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQGAPA 189
Query: 262 QYPKAS--------YQNS----QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 309
P + +Q + NTTV+VGNL T L LF G L
Sbjct: 190 PRPTGAGGAPAPINFQGGPLSYETVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYL 249
Query: 310 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+++ A + FV+ A A+ L G + G+ I+ SWG+
Sbjct: 250 SEIRMQADRGFAFVKLDTHENAAMAIVQLQGQMVHGRPIKCSWGK 294
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSCAE 332
P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D AE
Sbjct: 10 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAE 69
Query: 333 EALRMLNGTQLGGQNIRLSW 352
AL+ LNG ++ IR++W
Sbjct: 70 TALQTLNGRKIFDTEIRVNW 89
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 145/281 (51%), Gaps = 15/281 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F G + K+I ++ G + Y F+EF A L
Sbjct: 114 RTLYVGNLSRQVTEQLILQLFGAIGPCKSCKMI-SEHAGN-DPYCFVEFYDHNHASAALT 171
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + + E ++NWA+ +G K+D + H +FVGDL+ ++ L+ F A +
Sbjct: 172 AMNGRKIMHKE--VKVNWATTPSGNKKDTSNHHHVFVGDLSPEIDTTDLKAAF-APFGKI 228
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KTV 257
A+VV D T +++GYGFV F ++ + A+ M+G + R +R AT K K+
Sbjct: 229 SDARVVRDAQTAKSRGYGFVSFVNKVDAENAIGAMSGQWLGGRAIRTNWATRKPPPPKSN 288
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG 317
GQ+Q SY S P NTTV+ G + +T++ +R FS +G + +++
Sbjct: 289 EGQKQL---SYDEVLCQAS---PTNTTVYCGGITKGLTEDLMRNTFSNFGPIQEIRVFPE 342
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
K F++F A A+ +NGTQ+ GQ ++ SWG+ S+
Sbjct: 343 KGYSFIRFFSHEVAAMAIVTVNGTQIEGQAVKCSWGKESSD 383
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 36/236 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D++ T++VG+L+ VT+ ++ + F A P K K++ + Y FV F D +
Sbjct: 109 DESRPRTLYVGNLSRQVTEQLILQLFGAIGP-CKSCKMISEH--AGNDPYCFVEFYDHNH 165
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+T MNG + +++ AT T SG ++ D N+ VFVG
Sbjct: 166 ASAALTAMNGRKIMHKEVKVNWAT---TPSGNKK---------------DTSNHHHVFVG 207
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L + L+ F+ +G++ ++ + GFV F ++ AE A+ ++G
Sbjct: 208 DLSPEIDTTDLKAAFAPFGKISDARVVRDAQTAKSRGYGFVSFVNKVDAENAIGAMSGQW 267
Query: 343 LGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG 398
LGG+ IR +W + K P N+ G Q + A+P + ++Y GG
Sbjct: 268 LGGRAIRTNWA---TRKPPPPKSNE------GQKQLSYDEVLCQASPTNTTVYCGG 314
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG-----FVQFADRSCA 331
+D+ T++VGNL VT++ + +LF G K+ + G FV+F D + A
Sbjct: 108 EDESRPRTLYVGNLSRQVTEQLILQLFGAIGPCKSCKM-ISEHAGNDPYCFVEFYDHNHA 166
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ + ++++W +PS +
Sbjct: 167 SAALTAMNGRKIMHKEVKVNWATTPSGNK 195
>gi|324507975|gb|ADY43373.1| Nucleolysin TIAR [Ascaris suum]
Length = 290
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 135/256 (52%), Gaps = 26/256 (10%)
Query: 152 EQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR 210
++ ++NWA+ + + DT H +F+GDL+ +V + L++ F A + AKV+ D
Sbjct: 8 DREMKVNWATEPGSQAKVDTSKHFHVFIGDLSPEVDNKALKDAF-APFGEVSDAKVIRDS 66
Query: 211 LTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT-VSGQQQYPKASYQ 269
T ++KGYGFV + E RA+ +MNG + R +R AT K T GQQ P+ SY
Sbjct: 67 TTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTDGQQSKPELSYD 126
Query: 270 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRS 329
+ + P+NT+V++GN++ V DE LR F ++G++V V+I + FV+F +
Sbjct: 127 D---VFNQTGPDNTSVYIGNVNQSVNDEDLRAAFDKFGRIVEVRIFKTQGFAFVRFDKKD 183
Query: 330 CAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAP 389
A A+ +NGT++GGQ ++ SWGR+P +G+ N AAA
Sbjct: 184 SACNAIVKMNGTEIGGQTVKCSWGRTP--------------------EGHNNQQNAAANY 223
Query: 390 QDPSMYYGGYPGYGNY 405
YG Y YG Y
Sbjct: 224 NQMQGAYGAYGPYGAY 239
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 25/172 (14%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++IGDL +D L FA GEV KVIR+ T + +GYGF+ + R AER ++
Sbjct: 33 VFIGDLSPEVDNKALKDAFAPFGEVSDAKVIRDSTTLKSKGYGFVSYPKREEAERAIEQM 92
Query: 144 NGTPMPNGEQNFRLNWASF------GAGEK----RDDT-----PDHT-IFVGDLAADVTD 187
NG + G + R NWA+ G K DD PD+T +++G++ V D
Sbjct: 93 NGQWL--GRRTIRTNWATRKPTGTDGQQSKPELSYDDVFNQTGPDNTSVYIGNVNQSVND 150
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
L+ F K ++V R+ +T+G+ FVRF + A+ +MNG
Sbjct: 151 EDLRAAF------DKFGRIVEVRIF-KTQGFAFVRFDKKDSACNAIVKMNGT 195
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 152/299 (50%), Gaps = 29/299 (9%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + + +FVGDL+ +V D +L + F A + +
Sbjct: 77 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSA-FGTL 133
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT G
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQGGPS 192
Query: 262 -------------------QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
Q SY+ S V Q+ NTTV+VGNL T L L
Sbjct: 193 PTMPGRPSGMGGAPAPINFQGGPLSYE-SVVQQTP--AYNTTVYVGNLVPYCTQADLIPL 249
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
F G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++ A
Sbjct: 250 FQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTA 308
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSCAE 332
P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D AE
Sbjct: 13 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAE 72
Query: 333 EALRMLNGTQLGGQNIRLSW 352
AL+ LNG ++ IR++W
Sbjct: 73 TALQTLNGRKIFDTEIRVNW 92
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 156/322 (48%), Gaps = 31/322 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E +L T F G+V K+IR + Y F+EF A L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN---DPYAFLEFTCHTAAVTALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPS 200
N + + E ++NWA+ + + DT +H IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMNKRVVLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
++V D T ++KGY FV F +++ A+ MNG + +R +R +T K G
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 261 QQYPKASYQNSQ----VAQSDDDPNNTTVFVGNLDS-IVTDEHLRELFSQYGQLVHVKIP 315
+ +S + Q + P NTTV+ G S I+T+E ++ FSQ+GQ+ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR--------SPSNKQAQPD--- 364
K F++F + A A+ + T++ G ++ WG+ S +N A P
Sbjct: 242 RDKGYAFIRFTTKEAAAHAIGATHNTEISGHTVKCFWGKENGGAENQSGNNSSAAPPAMG 301
Query: 365 -------PNQWNAGYYGYAQGY 379
P Q GY+ YAQGY
Sbjct: 302 GQSRYPYPYQQGMGYW-YAQGY 322
>gi|358059025|dbj|GAA95206.1| hypothetical protein E5Q_01862 [Mixia osmundae IAM 14324]
Length = 352
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 147/286 (51%), Gaps = 19/286 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L+IG++ + E L FA G V VK+I R Q G + YGF+EF + GAE+ LQ
Sbjct: 14 LYIGNISPRVTEYMLQEVFALAGPVQQVKIIPDRTFQHGGLN-YGFVEFYTMQGAEQALQ 72
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T G + + E ++NWA K D T +F GDL+ +VTD +LQ+TF A + S
Sbjct: 73 TLAGRKLFDTE--MKVNWAYQNQTAKEDVTNHFHVFCGDLSPEVTDDILQKTFSA-FGSL 129
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK------ 255
A+V+ D +G+++GYGF+ F D ++ A+ MNG + +R +R+ A K
Sbjct: 130 SDARVMWDMASGKSRGYGFLAFRDRADAEAAINAMNGEWLGSRAIRVNWANQKNQGMMGD 189
Query: 256 TVSGQQQYPKASYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQ 308
G+ P A QV SD + +NTTV+VGNL T L LF YG
Sbjct: 190 GGMGEGPPPPARSGGFQVGGSDYNMVVTQTPVSNTTVYVGNLVPYCTQADLIPLFQGYGY 249
Query: 309 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+V +++ A + FV+ A A+ L G G++++ SWG+
Sbjct: 250 IVEIRMQADRGFAFVKLDTHEHAAMAIAYLTGQMCQGRSLKCSWGK 295
>gi|224073594|ref|XP_002304117.1| predicted protein [Populus trichocarpa]
gi|222841549|gb|EEE79096.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 150/296 (50%), Gaps = 24/296 (8%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V K+IR +++ YGFI + R A
Sbjct: 49 PSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKEKSS----YGFIHYFDRRAAA 104
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + IFVGDL+ +VTD L F
Sbjct: 105 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLYACFSV- 160
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN-KKT 256
YPS A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R A+ +
Sbjct: 161 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWASKGAGS 220
Query: 257 VSGQQQYPKASYQNSQVAQSDDD---PNN---------TTVFVGNLDSIVTDEHLRELFS 304
+Q S + S+D PNN TTV+VGNL VT L F
Sbjct: 221 NEDKQSSDSKSVVELTIGTSEDGMEAPNNEAPENNPQYTTVYVGNLSPEVTQPVLHRHFH 280
Query: 305 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 357
G V V++ K GFV+F+ + A A++M N + L G+ I+ SWG P+
Sbjct: 281 VLGAGVIEEVRVQRDKGFGFVRFSTHAEAAVAIQMGNAQSLLCGKQIKCSWGSKPT 336
>gi|226528727|ref|NP_001148487.1| mRNA 3-UTR binding protein [Zea mays]
gi|195619730|gb|ACG31695.1| mRNA 3-UTR binding protein [Zea mays]
Length = 447
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 149/299 (49%), Gaps = 28/299 (9%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E+ L F G V K+IR +++ +GF+++ R A
Sbjct: 68 PSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSAA 123
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ T +G + Q ++NWA A +R+DT H IFVGDL+++V D L F A
Sbjct: 124 LAIMTLHGRHVYG--QAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA 179
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS A+V+ D TGR++GYGFV F ++ E A+ EM G + +R +R AT +
Sbjct: 180 -YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIAEMTGKWLGSRQIRCNWATKNNS 238
Query: 257 VSGQQQ-------YPKASYQNSQVAQSDD---------DPNNTTVFVGNLDSIVTDEHLR 300
+ S NS S D +P+ TTV+VGNL V + L
Sbjct: 239 EEKPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQNNPDCTTVYVGNLGHEVNRDELH 298
Query: 301 ELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
F G + V++ K GFV+++ A A++M NG+ + G+ I+ SWG P+
Sbjct: 299 RHFYNLGVGAIEEVRVQQDKGFGFVRYSTHGEAALAIQMSNGSVVRGKPIKCSWGVKPT 357
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F+ + G + +GFV + D
Sbjct: 67 DPSTCRSVYVGNVNPNVTESLLIEVFQ-----SAGLVERCKLIRKEKSSFGFVDYYDRRS 121
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ ++G + V GQ +Y ++Q +D + +FVG
Sbjct: 122 AALAIMTLHG----------------RHVYGQAIKVNWAYASTQ---REDTSGHFHIFVG 162
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L S V D L FS Y ++ + G FV F ++ AE A+ + G
Sbjct: 163 DLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIAEMTGKW 222
Query: 343 LGGQNIRLSWGRSPSNKQAQPDPNQWNA 370
LG + IR +W + +N + +P+ + NA
Sbjct: 223 LGSRQIRCNWA-TKNNSEEKPETDNHNA 249
>gi|336389833|gb|EGO30976.1| hypothetical protein SERLADRAFT_455426 [Serpula lacrymans var.
lacrymans S7.9]
Length = 439
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 151/301 (50%), Gaps = 28/301 (9%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 77
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D T + +FVGDL+ +V D +L + F A + +
Sbjct: 78 TLNGRKIFDTE--IRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSA-FGTM 134
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K S
Sbjct: 135 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSVAV 194
Query: 262 QYPK------------------ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELF 303
P SY +S V Q+ N+TV+VGNL T L LF
Sbjct: 195 ASPPRPGATGGAPAPINFQGGPLSY-DSVVQQTPS--YNSTVYVGNLVPYCTQADLIPLF 251
Query: 304 SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN-KQAQ 362
G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++ AQ
Sbjct: 252 QSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTTAQ 311
Query: 363 P 363
P
Sbjct: 312 P 312
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSCAE 332
P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D AE
Sbjct: 14 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAE 73
Query: 333 EALRMLNGTQLGGQNIRLSW 352
AL+ LNG ++ IR++W
Sbjct: 74 TALQTLNGRKIFDTEIRVNW 93
>gi|255641747|gb|ACU21144.1| unknown [Glycine max]
Length = 397
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 153/292 (52%), Gaps = 25/292 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + ++ L F+ G + K+IR +++ YGF+++ R+ A +
Sbjct: 46 RSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFAIV 101
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L F YPS
Sbjct: 102 TLNGRNIFG--QPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYACFSV-YPS 156
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT + S +
Sbjct: 157 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDE 216
Query: 261 QQYPKA---------SYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY- 306
+Q + S + Q +DD P TTV+VGNL VT L + F
Sbjct: 217 KQSSDSKIVVELINGSSEEGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLN 276
Query: 307 -GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G + V++ K GFV+++ + A A++M N L G+ I+ SWG P+
Sbjct: 277 AGIIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWGSKPT 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +LQE F ST GA + YGFV + D S
Sbjct: 41 DSSSCRSVYVGNIHPQVTDSLLQELF-----STAGALEGCKLIRKEKSSYGFVDYFDRSS 95
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG +P+++ A Y +S Q +D + +FVG
Sbjct: 96 AAFAIVTLNGRNIFGQPIKVNWA----------------YASS---QREDTSGHFNIFVG 136
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ GFV F ++ A+ A+ L G
Sbjct: 137 DLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 196
Query: 343 LGGQNIRLSW---GRSPSNKQAQPD 364
LG + IR +W G S S+++ D
Sbjct: 197 LGSRQIRCNWATKGASASDEKQSSD 221
>gi|356547954|ref|XP_003542369.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 410
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 153/292 (52%), Gaps = 25/292 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + ++ L F+ G + K+IR +++ YGF+++ R+ A +
Sbjct: 46 RSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFAIV 101
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L F YPS
Sbjct: 102 TLNGRNIFG--QPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYACFSV-YPS 156
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT + S +
Sbjct: 157 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDE 216
Query: 261 QQYPKA---------SYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY- 306
+Q + S + Q +DD P TTV+VGNL VT L + F
Sbjct: 217 KQSSDSKIVVELINGSSEEGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLN 276
Query: 307 -GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G + V++ K GFV+++ + A A++M N L G+ I+ SWG P+
Sbjct: 277 AGIIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWGSKPT 328
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +LQE F ST GA + YGFV + D S
Sbjct: 41 DSSSCRSVYVGNIHPQVTDSLLQELF-----STAGALEGCKLIRKEKSSYGFVDYFDRSS 95
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG +P+++ A Y +S Q +D + +FVG
Sbjct: 96 AAFAIVTLNGRNIFGQPIKVNWA----------------YASS---QREDTSGHFNIFVG 136
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ GFV F ++ A+ A+ L G
Sbjct: 137 DLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 196
Query: 343 LGGQNIRLSW---GRSPSNKQAQPD 364
LG + IR +W G S S+++ D
Sbjct: 197 LGSRQIRCNWATKGASASDEKQSSD 221
>gi|326534302|dbj|BAJ89501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 151/299 (50%), Gaps = 28/299 (9%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L F +G V K+IR +++ +GF+++ R A
Sbjct: 69 PSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDRRSAA 124
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ T +G + Q ++NWA A +R+DT H IFVGDL+++V D L F +
Sbjct: 125 LAIMTLHGRHIYG--QAIKVNWAF--ASTQREDTSGHFHIFVGDLSSEVNDATLYACF-S 179
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS A+V+ D TGR++GYGFV F ++ E A+TEM G + +R +R AT
Sbjct: 180 TYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNA 239
Query: 257 VSGQQQ------------YPKASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLR 300
Q+ A+ + +Q S ++P N TTV+VGNL V + L
Sbjct: 240 EEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELH 299
Query: 301 ELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
F G + V++ K GF++++ A A++M NG + G+ I+ SWG P+
Sbjct: 300 RHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWGNKPT 358
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F+ P + + ++ +GFV + D
Sbjct: 68 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEK-----SSFGFVDYYDRRS 122
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ ++G + + GQ ++ ++Q +D + +FVG
Sbjct: 123 AALAIMTLHG----------------RHIYGQAIKVNWAFASTQ---REDTSGHFHIFVG 163
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L S V D L FS Y ++ + G FV F ++ AE A+ + G
Sbjct: 164 DLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 223
Query: 343 LGGQNIRLSWGRSPSNKQAQPDPNQ 367
LG + IR +W + ++ Q N
Sbjct: 224 LGSRQIRCNWATKTNAEEKQETDNH 248
>gi|291228733|ref|XP_002734330.1| PREDICTED: tRNA selenocysteine associated protein 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 347
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 113/191 (59%), Gaps = 19/191 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
TLW+GD++ + DE ++ F+H+GE AVK+++NK TG Y F++F A AERV+
Sbjct: 4 TLWMGDVEPFWDENFIRGAFSHSGEQPTAVKLMKNKLTGGQARYCFVDFRDSAAAERVMS 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFG--------------AGEKRDDTPDHTIFVGDLAADV 185
NG P+PN + F+LN+A +G A K + + ++FVG+L+ +V
Sbjct: 64 ICNGKPVPNSTPPRMFKLNFAVYGMQAPPKAAGATGGPADPKSFNRKEFSLFVGELSPEV 123
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTR 244
DY L F RYPS KGAKV++D G ++G+GFVRFG E EQ RA+ EM N R
Sbjct: 124 DDYALYNFFSRRYPSIKGAKVIMDN-AGMSRGFGFVRFGSEEEQQRALNEMQNASGLGGR 182
Query: 245 PMRIGPATNKK 255
+R+ AT KK
Sbjct: 183 SLRVSIATPKK 193
>gi|390604168|gb|EIN13559.1| hypothetical protein PUNSTDRAFT_117298 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 425
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 157/317 (49%), Gaps = 38/317 (11%)
Query: 67 GVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEG 124
GVA PQ++ L++G+L + E L FA G V VK+I RN Q G +
Sbjct: 8 GVAEAPQRRAH------LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN- 60
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
YGF+E+I AE LQT NG + + E R+NWA G K D + + +FVGDL+ +
Sbjct: 61 YGFVEYIDMRAAETALQTLNGRKIFDTE--IRVNWAYQGNQNKEDTSNHYHVFVGDLSPE 118
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
V D +LQ+ F A + S A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R
Sbjct: 119 VNDEVLQKAFSA-FGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSR 177
Query: 245 PMRIGPATNKKTVSGQQQYPKA-----------------------SYQNSQVAQSDDDPN 281
+R+ A K + P SY+ S V+Q+
Sbjct: 178 AIRVNWANQKTQGAMGGGAPAPAAARPSPGLGGSPAPMNFQGGPISYE-SVVSQTP--AY 234
Query: 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 341
N+TV+VGNL T L LF G L +++ A + FV+ A A+ L G
Sbjct: 235 NSTVYVGNLVPYCTQADLIPLFQSIGYLQEIRMQADRGFAFVKLDTHEHAAMAIIQLQGQ 294
Query: 342 QLGGQNIRLSWGRSPSN 358
+ G+ I+ SWG+ ++
Sbjct: 295 MVHGRPIKCSWGKDRAD 311
>gi|291228735|ref|XP_002734331.1| PREDICTED: tRNA selenocysteine associated protein 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 334
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
TLW+GD++ + DE ++ F+H+GE AVK+++NK TG Y F++F A AERV+
Sbjct: 4 TLWMGDVEPFWDENFIRGAFSHSGEQPTAVKLMKNKLTGGQARYCFVDFRDSAAAERVMS 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRD-DTPDHTIFVGDLAADVTDYMLQETFRARY 198
NG P+PN + F+LN+A +G + + + ++FVG+L+ +V DY L F RY
Sbjct: 64 ICNGKPVPNSTPPRMFKLNFAVYGMQAPPNFNRKEFSLFVGELSPEVDDYALYNFFSRRY 123
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTRPMRIGPATNKK 255
PS KGAKV++D G ++G+GFVRFG E EQ RA+ EM N R +R+ AT KK
Sbjct: 124 PSIKGAKVIMDN-AGMSRGFGFVRFGSEEEQQRALNEMQNASGLGGRSLRVSIATPKK 180
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 160/312 (51%), Gaps = 26/312 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + +T + Y F+EF A L
Sbjct: 15 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 74
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 75 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 131
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K
Sbjct: 132 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---- 187
Query: 262 QYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
PK++Y+++ S D+ PNN TV+ G + S +T++ +R+ FS +GQ++ +++
Sbjct: 188 --PKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 245
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ----PDP 365
K FV+F+ A A+ +NGT + G ++ WG+ +P +Q Q P
Sbjct: 246 PDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTY 305
Query: 366 NQWNAGYYGYAQ 377
QW +YG AQ
Sbjct: 306 GQWGQ-WYGNAQ 316
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 26/191 (13%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 10 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMDVRTAGNDPYCFVEFHEHR 67
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + + G++ K ++ + +Q D N+ VFV
Sbjct: 68 HAAAALAAMNG----------------RKIMGKE--VKVNWATTPSSQKKDTSNHFHVFV 109
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 110 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 169
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 170 WLGGRQIRTNW 180
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 92 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 151
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 152 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSS 209
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 210 PNNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHESAA 262
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 263 HAIVSVNGT 271
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCA 331
+D T++VGNL VT+ + +LFSQ G + K+ R FV+F + A
Sbjct: 10 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHA 69
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 70 AAALAAMNGRKIMGKEVKVNWATTPSSQK 98
>gi|150866410|ref|XP_001386002.2| hypothetical protein PICST_62299 [Scheffersomyces stipitis CBS
6054]
gi|149387666|gb|ABN67973.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 446
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 150/294 (51%), Gaps = 22/294 (7%)
Query: 84 LWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+W+G L W +E+ N V+VK++R+K Y F+ F + + +Q
Sbjct: 85 IWMGGLDPTWTEESIANIWQTVGVPPVSVKIMRDKFNTTKPPYSFVTFANEKEVDTAVQK 144
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTP---------DHTIFVGDLAADVTDYMLQET 193
NG +P + F++N+A G + D+ +H+IF+GDLA DVT+ ++
Sbjct: 145 -NGLVIPGSARTFKINYAG-GPNSRYPDSSNSRQIAPKNEHSIFIGDLALDVTEDLIFAK 202
Query: 194 FRARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F ++P K K++ D+ TG KG+GFVRF + + RA+ EMNGV +R +R+G A+
Sbjct: 203 FNTQFPGQVKQVKIMFDQQTGANKGFGFVRFTNIEIKNRALKEMNGVVVGSRAIRVGQAS 262
Query: 253 NKKTVSGQQQYPKA-SYQNSQVAQSDD--------DPNNTTVFVGNLDSIVTDEHLRELF 303
+ P++ +++ S+V S DPNNTT+ + L S T++ L F
Sbjct: 263 GSNSGGFSSPAPESENHEISRVHLSQSQPALNQFTDPNNTTLSITGLSSKFTEDELALHF 322
Query: 304 SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
+G +V K+ + ++F RS AE A+ L+G + NI ++WG+ S
Sbjct: 323 IAFGDIVACKLSDDLQSASIKFFSRSAAEWAVLFLHGAIINDCNISITWGKDSS 376
>gi|297850132|ref|XP_002892947.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338789|gb|EFH69206.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
Length = 419
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 151/297 (50%), Gaps = 26/297 (8%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V + K+IR +++ YGF+ + R A
Sbjct: 50 PSTCRSVYVGNIHIQVTEPLLQEVFASTGPVESCKLIRKEKSS----YGFVHYFDRRSAG 105
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + IFVGDL+ +VTD ML F
Sbjct: 106 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSSHFNIFVGDLSPEVTDAMLFNCFSV- 161
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
YPS A+V+ D+ TGR++G+GFV F ++ + A+ E+ G + +R +R AT K
Sbjct: 162 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWAT-KGAT 220
Query: 258 SGQQQYPKASYQ----NSQVAQSDDDPNN----------TTVFVGNLDSIVTDEHLRELF 303
SG+ + S S V++ D N TTV+VGNL V+ L F
Sbjct: 221 SGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHF 280
Query: 304 SQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 357
G V V++ K GFV+++ A A+ M N + L G+ ++ SWG P+
Sbjct: 281 HSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAISMGNTHSYLSGRQMKCSWGSKPT 337
>gi|209737894|gb|ACI69816.1| tRNA selenocysteine-associated protein 1 SECp43 [Salmo salar]
Length = 271
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQ-IEGYGFIEFISRAGAER 138
+ TLW+G+L+ +MDE ++ F GE VV+V++IRNK TG+ GY F+E A AER
Sbjct: 1 MSTLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGRGAAGYCFVELTDEATAER 60
Query: 139 VLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
L+ NG +P + F+LN A+FG ++ + +P +++FVGDL +V D ML E F
Sbjct: 61 CLRKVNGKALPGATPPRRFKLNRATFG--KQGESSPLYSLFVGDLTPEVDDGMLYEFFYN 118
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
RYPS +G KVV+D TG +KG GFV+F D+ Q A+ E G V ++P+R+ A NK
Sbjct: 119 RYPSCRGGKVVLDG-TGNSKGCGFVQFPDQRLQKLALEECQGAVGLGSKPLRLSLAANK 176
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 29/218 (13%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGR-TKGYGFVRFGDESEQLRAM 233
T+++G+L + + + F +++ +++TGR GY FV DE+ R +
Sbjct: 3 TLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGRGAAGYCFVELTDEATAERCL 62
Query: 234 TEMNGVFC--STRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
++NG +T P R N+ T G+Q Y ++FVG+L
Sbjct: 63 RKVNGKALPGATPPRRF--KLNRATF-GKQGESSPLY---------------SLFVGDLT 104
Query: 292 SIVTDEHLRELF------SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLG 344
V D L E F + G++V K CGFVQF D+ + AL G LG
Sbjct: 105 PEVDDGMLYEFFYNRYPSCRGGKVVLDGTGNSKGCGFVQFPDQRLQKLALEECQGAVGLG 164
Query: 345 GQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENY 382
+ +RLS + + + Q D W + GY +Y
Sbjct: 165 SKPLRLSLAANKT-RHNQSDNRGWGSHGGGYRHNQYDY 201
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLV-HVKIPAGKRCG-------FVQFADRSCAEEA 334
+T+++GNL+ + + + F G+LV V+I K G FV+ D + AE
Sbjct: 2 STLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGRGAAGYCFVELTDEATAERC 61
Query: 335 LRMLNGTQLGGQN--IRLSWGRSPSNKQAQPDP 365
LR +NG L G R R+ KQ + P
Sbjct: 62 LRKVNGKALPGATPPRRFKLNRATFGKQGESSP 94
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 160/312 (51%), Gaps = 26/312 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + +T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 66
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 123
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K
Sbjct: 124 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---- 179
Query: 262 QYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
PK++Y+++ S D+ PNN TV+ G + S +T++ +R+ FS +GQ++ +++
Sbjct: 180 --PKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 237
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ----PDP 365
K FV+F+ A A+ +NGT + G ++ WG+ +P +Q Q P
Sbjct: 238 PDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTY 297
Query: 366 NQWNAGYYGYAQ 377
QW +YG AQ
Sbjct: 298 GQWGQ-WYGNAQ 308
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 26/191 (13%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMDVRTAGNDPYCFVEFHEHR 59
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + + G++ K ++ + +Q D N+ VFV
Sbjct: 60 HAAAALAAMNG----------------RKIMGKE--VKVNWATTPSSQKKDTSNHFHVFV 101
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 102 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 161
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 162 WLGGRQIRTNW 172
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 84 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 144 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSS 201
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 202 PNNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHESAA 254
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 255 HAIVSVNGT 263
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCA 331
+D T++VGNL VT+ + +LFSQ G + K+ R FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHA 61
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 62 AAALAAMNGRKIMGKEVKVNWATTPSSQK 90
>gi|255724936|ref|XP_002547397.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135288|gb|EER34842.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 451
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 145/284 (51%), Gaps = 13/284 (4%)
Query: 84 LWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+GDL W ++ + VK++R+K Y F+ F + + +Q
Sbjct: 84 LWMGDLDPNWTEDWITELWTKLVSKPQHVKLMRDKLNPSRASYCFVTFKDQESVDLAIQR 143
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDD----TPDHTIFVGDLAADVTDYMLQETFRARY 198
NG +P+ ++ F+LN + + ++++ D ++F+GDL +V+D L F +Y
Sbjct: 144 -NGQKVPDSDRFFKLNHSGKHSSGRQENHGAHIADFSMFIGDLVPEVSDATLFSKFNTKY 202
Query: 199 PS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
P+ K AKV++D T ++KG+GFV+F +A+TEM G ++ +R+G A T
Sbjct: 203 PNQIKQAKVIVDLNTKKSKGFGFVKFFTAEVMNKALTEMQGYIIGSKAIRVGLAAGSTTD 262
Query: 258 SGQQQYPKASYQNSQVAQSD------DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 311
S Q K Y +AQ DPNN ++ + L S +T+ L++ F +G L++
Sbjct: 263 STTQPITKFDYHKIHIAQQQPPLNQVTDPNNNSLTIRGLASQITEIELKQHFIAFGDLIY 322
Query: 312 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
++ + G+V+F R+ AE A L+G + +++SWG S
Sbjct: 323 CQVSNDYQTGYVKFYSRAAAETAFMNLHGYIINDCRLQISWGSS 366
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 141/279 (50%), Gaps = 12/279 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E +L T F G+V K+IR + Y F+EF A L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN---DPYAFLEFTCHTAAVTALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPS 200
N + + E ++NWA+ + + DT +H IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMNKRVVLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
++V D T ++KGY FV F +++ A+ MNG + +R +R +T K G
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 261 QQYPKASYQNSQ----VAQSDDDPNNTTVFVGNLDS-IVTDEHLRELFSQYGQLVHVKIP 315
+ +S + Q + P NTTV+ G S I+T+E ++ FSQ+GQ+ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
K F++F + A A+ + T++ G ++ WG+
Sbjct: 242 RDKGYAFIRFTTKEAAAHAIGATHNTEISGHTVKCFWGK 280
>gi|356519889|ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 422
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 152/296 (51%), Gaps = 24/296 (8%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L F+ TG V K+IR ++ YGFI + R A
Sbjct: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSGTGPVEGCKLIRKDKSS----YGFIHYFDRRSAA 108
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + + IFVGDL+ +VTD L F
Sbjct: 109 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSGHYNIFVGDLSPEVTDATLFACFSV- 164
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
YPS A+V+ D+ TGR++G+GFV F ++ + ++ ++ G + +R +R AT
Sbjct: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSSINDLTGKWLGSRQIRCNWATKGAGG 224
Query: 258 SGQQQYPKA---------SYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFS 304
+ ++Q A S ++ + + D P N TTV+VGNL VT L F
Sbjct: 225 NEEKQNSDAKSVVELTNGSSEDGKETSNSDAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
Query: 305 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 357
G V V++ K GFV+++ + A A++M N + L G+ I+ SWG P+
Sbjct: 285 ALGAGVMEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSLLCGKPIKCSWGSKPT 340
>gi|186478580|ref|NP_001117301.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|332191459|gb|AEE29580.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 416
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 152/294 (51%), Gaps = 23/294 (7%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V + K+IR +++ YGF+ + R A
Sbjct: 50 PSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSS----YGFVHYFDRRSAG 105
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + IFVGDL+ +VTD ML F
Sbjct: 106 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSV- 161
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
YP+ A+V+ D+ TGR++G+GFV F ++ + A+ E+ G + +R +R AT K
Sbjct: 162 YPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWAT-KGAT 220
Query: 258 SGQQQYPKASYQNSQVAQSD-------DDPNN----TTVFVGNLDSIVTDEHLRELFSQY 306
SG+ + S ++ D + P N TTV+VGNL V+ L F
Sbjct: 221 SGEDKQSSDSKSVVELTSGDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSL 280
Query: 307 GQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 357
G V V++ K GFV+++ A A++M N + L G+ ++ SWG P+
Sbjct: 281 GAGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPT 334
>gi|406603569|emb|CCH44882.1| Negative growth regulatory protein NGR1 [Wickerhamomyces ciferrii]
Length = 641
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 107/180 (59%), Gaps = 11/180 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ--------TGQIEGYGFIEFISR 133
+TLW+GDL W DE + ++ G+ V VK+I+ K+ TG GY FIEF +
Sbjct: 77 KTLWMGDLDPWSDEDAIVHLWSTLGKRVLVKLIKAKKGTPAATLNTGHA-GYCFIEFETY 135
Query: 134 AGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A+ L + NG+ +PN + FRLNWAS +P+ ++FVGDL+ T+ L
Sbjct: 136 DDAKSAL-SLNGSQIPNTNRLFRLNWASGATLSSPIPQSPEFSLFVGDLSPSTTEAHLLA 194
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F+ + S K +V+ D +TG ++ +GFVRF DE E+ RA+TEM GV+C+ RP+R+ AT
Sbjct: 195 LFQTHFKSVKTVRVMTDPITGTSRCFGFVRFSDEEERRRALTEMQGVWCAGRPLRVALAT 254
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DP NTTVF+G L + ++ L LF +G + HVKIP GK CGF++F R AE A+ +
Sbjct: 383 DPTNTTVFIGGLAPGIPEQTLAALFQPFGNITHVKIPPGKGCGFIRFDKREDAEAAIAGM 442
Query: 339 NGTQLGGQNIRLSWGRSPSNKQ 360
G Q+GG +RLSWGR+ + +Q
Sbjct: 443 QGFQIGGSRVRLSWGRAQNQQQ 464
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 45/236 (19%)
Query: 164 AGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRT-------- 215
A + +P T+++GDL D E ST G +V++ + +
Sbjct: 67 ATSQTSSSPPKTLWMGDL-----DPWSDEDAIVHLWSTLGKRVLVKLIKAKKGTPAATLN 121
Query: 216 ---KGYGFVRFGDESEQLRAMTEMNG--VFCSTRPMRIGPATNKKTVSGQQQYPKASYQN 270
GY F+ F + + ++ +NG + + R R+ A+ S Q P+ S
Sbjct: 122 TGHAGYCFIEF-ETYDDAKSALSLNGSQIPNTNRLFRLNWASGATLSSPIPQSPEFS--- 177
Query: 271 SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK------IPAGKRC-GFV 323
+FVG+L T+ HL LF + + V I RC GFV
Sbjct: 178 --------------LFVGDLSPSTTEAHLLALFQTHFKSVKTVRVMTDPITGTSRCFGFV 223
Query: 324 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNAGYYGYAQG 378
+F+D AL + G G+ +R++ +P N+ Q + N AG G G
Sbjct: 224 RFSDEEERRRALTEMQGVWCAGRPLRVALA-TPRNQSNQTNQTNSLIAGLNGLNLG 278
>gi|255574179|ref|XP_002528005.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223532631|gb|EEF34417.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 417
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 146/293 (49%), Gaps = 25/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L F G + K+IR ++ YGF+++ R+ A +
Sbjct: 38 CRSVYVGNIHVNVTEKLLAEVFQTAGPLAGCKLIRKDKSS----YGFVDYHDRSCAAVAI 93
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T +G + Q ++NWA A +R+DT H IFVGDL+ +VTD L F Y
Sbjct: 94 MTLHGRQLYG--QALKVNWAY--ANSQREDTSGHFHIFVGDLSPEVTDATLFACFSV-YN 148
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI-----GPATNK 254
S A+V+ D TGR+KGYGFV F ++ E A+ +++G + R +R G A+N+
Sbjct: 149 SCSDARVMWDHKTGRSKGYGFVSFRNQREAQSAINDLSGKWLGNRQIRCNWATKGSASNE 208
Query: 255 KTVSGQQQ----YPKASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY 306
G Q S + Q ++D P N TTV+VGNL VT L F
Sbjct: 209 DKQIGDNQNAVILTSGSSEGGQENANEDAPENNPAYTTVYVGNLCHEVTQSELHCQFHTL 268
Query: 307 GQ--LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G + V++ K GFV++ A A++M NG + G+ ++ SWG P+
Sbjct: 269 GAGIIEEVRVQRDKGFGFVRYTTHEEAASAIQMANGKIVRGKPMKCSWGSKPT 321
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 32/207 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F+ P + D+ YGFV + D S
Sbjct: 34 DSSACRSVYVGNIHVNVTEKLLAEVFQTAGPLAGCKLIRKDK-----SSYGFVDYHDRSC 88
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ ++G + + GQ +Y NS Q +D + +FVG
Sbjct: 89 AAVAIMTLHG----------------RQLYGQALKVNWAYANS---QREDTSGHFHIFVG 129
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ K GFV F ++ A+ A+ L+G
Sbjct: 130 DLSPEVTDATLFACFSVYNSCSDARVMWDHKTGRSKGYGFVSFRNQREAQSAINDLSGKW 189
Query: 343 LGGQNIRLSWGR--SPSNKQAQPDPNQ 367
LG + IR +W S SN+ Q NQ
Sbjct: 190 LGNRQIRCNWATKGSASNEDKQIGDNQ 216
>gi|18394471|ref|NP_564018.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|9665134|gb|AAF97318.1|AC007843_21 Putative RNA binding protein [Arabidopsis thaliana]
gi|21553830|gb|AAM62923.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
gi|111074422|gb|ABH04584.1| At1g17370 [Arabidopsis thaliana]
gi|332191458|gb|AEE29579.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 419
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 152/297 (51%), Gaps = 26/297 (8%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V + K+IR +++ YGF+ + R A
Sbjct: 50 PSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSS----YGFVHYFDRRSAG 105
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + IFVGDL+ +VTD ML F
Sbjct: 106 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSV- 161
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
YP+ A+V+ D+ TGR++G+GFV F ++ + A+ E+ G + +R +R AT K
Sbjct: 162 YPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWAT-KGAT 220
Query: 258 SGQQQYPKASYQ----NSQVAQSDDDPNN----------TTVFVGNLDSIVTDEHLRELF 303
SG+ + S S V++ D N TTV+VGNL V+ L F
Sbjct: 221 SGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHF 280
Query: 304 SQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 357
G V V++ K GFV+++ A A++M N + L G+ ++ SWG P+
Sbjct: 281 HSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPT 337
>gi|168027692|ref|XP_001766363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682272|gb|EDQ68691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 397
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 149/292 (51%), Gaps = 23/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L F++ G + K+IR +++ YGF++++ A L
Sbjct: 55 CRSVYVGNIHTKVTEALLAEVFSNIGPLEGCKLIRKEKSS----YGFVDYLDHIYAAVAL 110
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
T NG + Q ++NWA + +G++ D T + +FVGDL+ +VTD L F YPS
Sbjct: 111 TTLNGRLIFG--QPIKVNWA-YASGQREDTTGHYNVFVGDLSPEVTDATLFAAF-CVYPS 166
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A+V+ D+ +GR++G+GFV F + E A++EM G + TR +R AT + +
Sbjct: 167 CSDARVMWDQRSGRSRGFGFVSFRSQQEAENAISEMTGKWLGTRSIRCNWATKTNSSASA 226
Query: 261 QQYPKASYQ-NSQVAQSDDDP---------NN---TTVFVGNLDSIVTDEHLRELFSQYG 307
+ + ++S+D P NN TTV+VGNL V L F G
Sbjct: 227 DETNNGGHAVGMNDSKSEDRPEGSAGDGPENNPQYTTVYVGNLAHEVNQGELHRWFHCMG 286
Query: 308 QLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
V V++ K GFV++ A A++ NG L G++++ SWG P+
Sbjct: 287 AGVIEDVRVQKDKGFGFVRYRTHEEAALAIQAANGRVLCGKSVKCSWGSKPT 338
>gi|347840237|emb|CCD54809.1| hypothetical protein [Botryotinia fuckeliana]
Length = 218
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 93/183 (50%), Gaps = 30/183 (16%)
Query: 207 VIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG------- 259
+ D ++G ++GYGFVRF +E +Q RA+TEM GV+C RPMRI AT K G
Sbjct: 1 MTDPISGMSRGYGFVRFAEEGDQQRALTEMQGVYCGNRPMRISTATPKNKSGGAGPAGMQ 60
Query: 260 -----------------------QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTD 296
Y Q DPNNTTVFVG L VT+
Sbjct: 61 MQGGGGGGMPGAMGGAPGMYGMGGGPPMAGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTE 120
Query: 297 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 356
+ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS
Sbjct: 121 DELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQ 180
Query: 357 SNK 359
+N
Sbjct: 181 NNS 183
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L ++ E L + F GE+ VK+ K G GF++F+ R AE +
Sbjct: 108 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQ 161
Query: 143 FNGTPMPNGEQNFRLNWA 160
G P+ G RL+W
Sbjct: 162 MQGYPI--GNSRVRLSWG 177
>gi|357148481|ref|XP_003574781.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 452
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 149/299 (49%), Gaps = 28/299 (9%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E+ L F +G V K+IR +++ +GF+++ R A
Sbjct: 73 PSTCRSVYVGNVHPNVTESLLIEVFQSSGPVERCKLIRKEKSS----FGFVDYYDRRSAA 128
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ + +G + Q ++NWA A +R+DT H IFVGDL+++V D L F
Sbjct: 129 LAIMSLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSV 184
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
Y S A+V+ D TGR++GYGFV F ++ E A+TEM G + +R +R AT
Sbjct: 185 -YTSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNA 243
Query: 257 VSGQQ------------QYPKASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLR 300
Q+ A+ + +Q S ++P N TTV+VGNL V + L
Sbjct: 244 EEKQETDNHNAVVLTNGSSSNAAMEGNQETGSKENPENNPDFTTVYVGNLGHEVNRDELH 303
Query: 301 ELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
F G + V++ K GFV++ A A++M NG + G+ I+ SWG P+
Sbjct: 304 RHFYNLGVGAIEEVRVQQDKGFGFVRYNTHGEAALAIQMANGLVIRGKPIKCSWGNKPT 362
>gi|47207834|emb|CAF95099.1| unnamed protein product [Tetraodon nigroviridis]
Length = 286
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 105/177 (59%), Gaps = 8/177 (4%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ TLW+G+L +MDE ++ F+ GE V+V++IRNK TG GY F+E A AER
Sbjct: 1 MSTLWMGNLDSYMDEKFITRAFSTMGEQAVSVRIIRNKMTGGAMGYCFVEMSDEATAERC 60
Query: 140 LQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
L+ NG +P F+LN A+FG K+D +++FVGDL +V D ML E F R
Sbjct: 61 LRKINGKSLPGASPPTRFKLNRATFG---KQDVGQMYSLFVGDLTPEVDDGMLYEFFYNR 117
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATN 253
YPS +G KVV+D + G +KG GFV+F DE Q RA+ E G + +R+ A N
Sbjct: 118 YPSCRGGKVVLDSM-GNSKGCGFVQFPDERLQKRALDECQGAMGLGGKALRLSLAAN 173
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKG-----AKVVIDRLTGRTKGYGFVRFGDESEQ 229
T+++G+L D + E F R ST G +++ +++TG GY FV DE+
Sbjct: 3 TLWMGNL-----DSYMDEKFITRAFSTMGEQAVSVRIIRNKMTGGAMGYCFVEMSDEATA 57
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGN 289
R + ++NG + P P K +A++ V Q ++FVG+
Sbjct: 58 ERCLRKING---KSLPGASPPTRFKLN--------RATFGKQDVGQM------YSLFVGD 100
Query: 290 LDSIVTDEHLRELF------SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ- 342
L V D L E F + G++V + K CGFVQF D + AL G
Sbjct: 101 LTPEVDDGMLYEFFYNRYPSCRGGKVVLDSMGNSKGCGFVQFPDERLQKRALDECQGAMG 160
Query: 343 LGGQNIRLSWG----RSPSNKQAQPDPNQWNAGY 372
LGG+ +RLS R+ +QA P Q + GY
Sbjct: 161 LGGKALRLSLAANNLRNRPPQQADSRPAQSSTGY 194
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYG-QLVHVKIPAGKRCG------FVQFADRSCAEEAL 335
+T+++GNLDS + ++ + FS G Q V V+I K G FV+ +D + AE L
Sbjct: 2 STLWMGNLDSYMDEKFITRAFSTMGEQAVSVRIIRNKMTGGAMGYCFVEMSDEATAERCL 61
Query: 336 RMLNGTQLGGQN--IRLSWGRSPSNKQ 360
R +NG L G + R R+ KQ
Sbjct: 62 RKINGKSLPGASPPTRFKLNRATFGKQ 88
>gi|123904573|sp|Q4KM14.1|TSP1L_DANRE RecName: Full=tRNA selenocysteine 1-associated protein 1-like;
AltName: Full=tRNA selenocysteine 1-associated protein
1; AltName: Full=tRNA selenocysteine-associated protein
1
gi|68534021|gb|AAH98884.1| TRNA selenocysteine 1 associated protein 1 [Danio rerio]
Length = 316
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 110/178 (61%), Gaps = 7/178 (3%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +LW+GDL +MDE ++ F+ GE VK+I ++ TG GY F+E A +R
Sbjct: 5 MTSLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRC 64
Query: 140 LQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+Q NG +P N + F+LN+A++G ++ + P+ ++FVGDL ++V DY L + F +
Sbjct: 65 VQRLNGKLVPGSNPPRKFKLNYATYG--KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLKK 122
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTRPMRIGPATNK 254
+PS KGAKVV D G ++GYGFV+F DE+EQ +A+ E N +P+RI A NK
Sbjct: 123 FPSCKGAKVVTDPY-GNSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRISIAVNK 179
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + +++ F + G K++ R+TG + GY FV DE+ R +
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQ 66
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPN-NTTVFVGNLDSI 293
+NG ++ P +N P+ N +P +VFVG+L S
Sbjct: 67 RLNG--------KLVPGSNP---------PRKFKLNYATYGKRPEPGPEFSVFVGDLTSE 109
Query: 294 VTDEHLRELF-----SQYGQLVHVKIPAG--KRCGFVQFADRSCAEEALRML-NGTQLGG 345
V D L + F S G V V P G + GFV+F+D + ++AL N + LGG
Sbjct: 110 VDDYQLHQFFLKKFPSCKGAKV-VTDPYGNSRGYGFVKFSDENEQKKALEEFQNASGLGG 168
Query: 346 QNIRLSWGRSPSNKQA 361
+ IR+S + NK +
Sbjct: 169 KPIRISIAVNKGNKAS 184
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 155/308 (50%), Gaps = 22/308 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAASALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---- 177
Query: 262 QYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
PK++Y+++ S DD P+N TV+ G + S +T++ +R+ FS +GQ++ +++
Sbjct: 178 --PKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 235
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGY 375
K FV+F A A+ +NGT + G ++ WG+ + + NQ GY
Sbjct: 236 PDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMISPVQQNQ-----IGY 290
Query: 376 AQGYENYG 383
Q Y +G
Sbjct: 291 PQAYGQWG 298
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 28/191 (14%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + + G++ K ++ + +Q D N+ VFV
Sbjct: 58 HAASALAAMNG----------------RKIMGKE--VKVNWATTPSSQKKDTSNHFHVFV 99
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 100 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 159
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 160 WLGGRQIRTNW 170
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 27/188 (14%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 83 TPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVS 142
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWA---------SFGAGEKR---DDTPDH--- 174
F ++ AE +Q G + G + R NWA ++ + K+ DD +
Sbjct: 143 FFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSP 200
Query: 175 ---TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 201 SNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAH 253
Query: 232 AMTEMNGV 239
A+ +NG
Sbjct: 254 AIVSVNGT 261
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 SALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|238883643|gb|EEQ47281.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 452
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 146/284 (51%), Gaps = 13/284 (4%)
Query: 84 LWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+W+GDL W +E+ N + VK++R++ Y F+ F + + +Q
Sbjct: 85 MWMGDLDPQWTEESIDNLWTKLVSKPHHVKIMRDRLQPSKPSYCFVTFRDQESIDLAIQR 144
Query: 143 FNGTPMPNGEQNFRLNWA---SFGAGEKRDDTP-DHTIFVGDLAADVTDYMLQETFRARY 198
NG +P+ + F+LN++ S G+ ++ ++ +++IF+GDLA +V+D L F +Y
Sbjct: 145 -NGQKVPDSNRVFKLNYSGRNSTGSHDRSTNSSNEYSIFIGDLAPEVSDAALYNKFNMKY 203
Query: 199 PS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
P+ K AKV+ D T ++KG+GFV+F RA+ EM G ++ +R+G A
Sbjct: 204 PNQIKQAKVITDSSTRKSKGFGFVKFHSPDIMNRALKEMQGYNIGSKAIRVGLAAGSHVD 263
Query: 258 SGQQQYPKASYQNSQVAQSD------DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 311
+ + K + V QS DPNNT+ +G L +T+ L + F +G LV+
Sbjct: 264 TSFKPVTKLDHHRVPVPQSQPALNQFTDPNNTSFTIGGLSGRITESELEQHFIGFGDLVY 323
Query: 312 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
++ + G+++F RS AE A + G + ++++WG S
Sbjct: 324 CRVSKDYQTGYIKFYSRSAAESAFLNMYGFMINDCRLQITWGSS 367
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 25/188 (13%)
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
D +++GDL T+ + + K++ DRL Y FV F D+ E +
Sbjct: 82 DFQMWMGDLDPQWTEESIDNLWTKLVSKPHHVKIMRDRLQPSKPSYCFVTFRDQ-ESIDL 140
Query: 233 MTEMNG--VFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNL 290
+ NG V S R ++ + T S +S + N ++F+G+L
Sbjct: 141 AIQRNGQKVPDSNRVFKLNYSGRNSTGSHD--------------RSTNSSNEYSIFIGDL 186
Query: 291 DSIVTDEHLRELFSQY--GQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQ 342
V+D L F+ Q+ K+ K GFV+F AL+ + G
Sbjct: 187 APEVSDAALYNKFNMKYPNQIKQAKVITDSSTRKSKGFGFVKFHSPDIMNRALKEMQGYN 246
Query: 343 LGGQNIRL 350
+G + IR+
Sbjct: 247 IGSKAIRV 254
>gi|157384980|ref|NP_001025137.2| tRNA selenocysteine 1-associated protein 1-like [Danio rerio]
Length = 316
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 110/178 (61%), Gaps = 7/178 (3%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +LW+GDL +MDE ++ F+ GE VK+I ++ TG GY F+E A +R
Sbjct: 5 MTSLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRC 64
Query: 140 LQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+Q NG +P N + F+LN+A++G ++ + P+ ++FVGDL ++V DY L + F +
Sbjct: 65 VQRLNGKLVPGSNPPRKFKLNYATYG--KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLKK 122
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTRPMRIGPATNK 254
+PS KGAKVV D G ++GYGFV+F DE+EQ +A+ E N +P+RI A NK
Sbjct: 123 FPSCKGAKVVTDPY-GNSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRISIAVNK 179
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + +++ F + G K++ R+TG + GY FV DE+ R +
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQ 66
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPN-NTTVFVGNLDSI 293
+NG ++ P +N P+ N +P +VFVG+L S
Sbjct: 67 RLNG--------KLVPGSNP---------PRKFKLNYATYGKRPEPGPEFSVFVGDLTSE 109
Query: 294 VTDEHLRELF-----SQYGQLVHVKIPAG--KRCGFVQFADRSCAEEALRML-NGTQLGG 345
V D L + F S G V V P G + GFV+F+D + ++AL N + LGG
Sbjct: 110 VDDYQLHQFFLKKFPSCKGAKV-VTDPYGNSRGYGFVKFSDENEQKKALEEFQNASGLGG 168
Query: 346 QNIRLSWGRSPSNKQA 361
+ IR+S + NK +
Sbjct: 169 KPIRISIAVNKGNKAS 184
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 142/286 (49%), Gaps = 23/286 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI--EGYGFIEFISRAGAERVL 140
T+++G+L + +T LN F G+VV+VK+I ++ YGF+EF AE+ +
Sbjct: 19 TIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFADPRVAEQAI 78
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAG-------EKRDDTPDHTIFVGDLAADVTDYMLQET 193
Q NG + N E R NWA A K D T +FVGDLAA++ D L +
Sbjct: 79 QDMNGRKIFNYE--IRANWAQPSANINPPLQMTKEDTTNHFHVFVGDLAAEINDEKLAQA 136
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F + + + A V+ D L+G+++G+GFV F D+++ RA+ MNG + TRP+R AT
Sbjct: 137 F-SEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMNGEWLGTRPIRCNWATQ 195
Query: 254 KKTVSG-----QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQ 308
K + QQ P +V T+++VGN+ V+ L + F ++G
Sbjct: 196 KGQTAMPAPQPGQQLP------YEVVVQQTPAYVTSIYVGNIPLNVSQNDLVQPFQRFGY 249
Query: 309 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ VK A + FV+ A A+ L + G +LSWG+
Sbjct: 250 VQEVKFQADRGFAFVKMDTHENAANAIVHLQNMSINGNVTKLSWGK 295
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 90/194 (46%), Gaps = 28/194 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTK------GYGFVRFGD 225
P TI+VG+L VTD ML E F +T G V + ++ R YGFV F D
Sbjct: 16 PATTIYVGNLDQRVTDTMLNEIF-----TTVGQVVSVKIISVRKHNNFGAVNYGFVEFAD 70
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTV 285
+A+ +MNG +R A ++ Q K +D N+ V
Sbjct: 71 PRVAEQAIQDMNGRKIFNYEIRANWAQPSANINPPLQMTK-----------EDTTNHFHV 119
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKR--CGFVQFADRSCAEEALRMLN 339
FVG+L + + DE L + FS++G + + +GK GFV F D++ AE A+ +N
Sbjct: 120 FVGDLAAEINDEKLAQAFSEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMN 179
Query: 340 GTQLGGQNIRLSWG 353
G LG + IR +W
Sbjct: 180 GEWLGTRPIRCNWA 193
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 8/84 (9%)
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--------GFVQFADRSCAEEA 334
TT++VGNLD VTD L E+F+ GQ+V VKI + ++ GFV+FAD AE+A
Sbjct: 18 TTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFADPRVAEQA 77
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSN 358
++ +NG ++ IR +W + +N
Sbjct: 78 IQDMNGRKIFNYEIRANWAQPSAN 101
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 141/282 (50%), Gaps = 13/282 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L T F+ G V K+IR + Y F+EF++ A L
Sbjct: 10 KTLYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPNN---DPYAFVEFVNHQAASTALI 66
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E+ ++NWA S G K+D + H IFVGDL+ ++ + L+E F A +
Sbjct: 67 AMNKRHVL--EKEIKVNWATSPGNQPKQDTSSHHHIFVGDLSPEIEMHTLREAF-APFGE 123
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KT 256
++V D T ++KGY FV F ++E A+ MNG + R +R +T K +T
Sbjct: 124 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAESAIHAMNGQWLGNRSIRTNWSTRKPPPPRT 183
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 316
+Q KA QS P N TV+ G + + ++ + + FS++G + ++
Sbjct: 184 ERSRQGNAKAVSYEEVYNQSS--PTNCTVYCGGFTNGINEDLIEKAFSRFGTIQDIRSFK 241
Query: 317 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
K F++F+ + A A+ ++ ++ GQ ++ WG+ S+
Sbjct: 242 DKGYAFIRFSTKEAATHAIEAMHNAEINGQQVKCFWGKESSD 283
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 150/304 (49%), Gaps = 29/304 (9%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 13 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 71
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D T + +FVGDL+ +V D +L + F A + +
Sbjct: 72 TLNGRKIFDTE--IRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFSA-FGTM 128
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT
Sbjct: 129 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQGAPP 187
Query: 262 QYPKASYQNSQVAQSDDDPN---------------------NTTVFVGNLDSIVTDEHLR 300
+S + + P N+TV+VGNL T L
Sbjct: 188 TTTASSPRPGGAVTTGSAPAPINFQGGPLSYESVVQQTPAYNSTVYVGNLVPYCTQADLI 247
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN-K 359
LF G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++
Sbjct: 248 PLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGG 307
Query: 360 QAQP 363
AQP
Sbjct: 308 TAQP 311
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSC 330
+ P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D
Sbjct: 6 EAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRA 65
Query: 331 AEEALRMLNGTQLGGQNIRLSW 352
AE AL+ LNG ++ IR++W
Sbjct: 66 AETALQTLNGRKIFDTEIRVNW 87
>gi|66802614|ref|XP_635179.1| RNA recognition motif RNP-1 domain-containing protein
[Dictyostelium discoideum AX4]
gi|60463492|gb|EAL61677.1| RNA recognition motif RNP-1 domain-containing protein
[Dictyostelium discoideum AX4]
Length = 463
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 106/183 (57%), Gaps = 10/183 (5%)
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
D ++++GDLA DVTD L F+ RYPS + A+V++D TG ++GYGFV+F + E+ +A
Sbjct: 112 DLSLYIGDLATDVTDQQLMNAFQGRYPSVRSARVIMDSATGISRGYGFVKFASDVEKDKA 171
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDS 292
+ +MNG + + +P+++ T+K+ S P + DPNNT ++V LD
Sbjct: 172 LIDMNGFYINNKPIKVNNPTHKRLNSQTSTIPDL---------TSTDPNNTAIYVSQLDH 222
Query: 293 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352
+ + L+ +F YG++ ++K+ K FV F +R AE A LN +G +++ W
Sbjct: 223 YIDEGVLQTIFGAYGEISYIKMLTNKFSAFVNFVNRESAEAAFG-LNNFPVGNTRLKVQW 281
Query: 353 GRS 355
G++
Sbjct: 282 GKN 284
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 83 TLWIGDLQYWM-DETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+L+IGDL + D+ +N V + +VI + TG GYGF++F S ++ L
Sbjct: 114 SLYIGDLATDVTDQQLMNAFQGRYPSVRSARVIMDSATGISRGYGFVKFASDVEKDKALI 173
Query: 142 TFNG-----TPMP-NGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETF 194
NG P+ N + RLN + + P++T I+V L + + +LQ F
Sbjct: 174 DMNGFYINNKPIKVNNPTHKRLNSQTSTIPDLTSTDPNNTAIYVSQLDHYIDEGVLQTIF 233
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRF 223
A Y K++ ++ + FV F
Sbjct: 234 GA-YGEISYIKMLTNKFS------AFVNF 255
>gi|241951870|ref|XP_002418657.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223641996|emb|CAX43960.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 451
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 146/284 (51%), Gaps = 13/284 (4%)
Query: 84 LWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+W+GDL +W +E+ N + VK++R++ Y F+ F + + +Q
Sbjct: 84 MWMGDLDPHWTEESIDNLWTKLVSKPHHVKIMRDRLQPSKPSYCFVTFRDKESIDLAIQR 143
Query: 143 FNGTPMPNGEQNFRLNWA---SFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARY 198
NG +P+ + F+LN++ S G+ ++ + + +++IF+GDLA +V+D L F +Y
Sbjct: 144 -NGQKVPDSNRVFKLNYSGRNSTGSNDRSTNLSNEYSIFIGDLAPEVSDATLFNKFSMKY 202
Query: 199 PS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
P+ K AKV++D T ++KG+GFV+F RA+ EM G ++ +R+G A
Sbjct: 203 PNQIKQAKVIVDSSTRKSKGFGFVKFHSPETMNRALKEMQGYTIGSKAIRVGLAAGSNVD 262
Query: 258 SGQQQYPKASYQNSQVAQSD------DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 311
+ Q K + V Q DPNNT++ + L +T+ L + F +G +++
Sbjct: 263 TSSQPVTKLDHHRIPVPQPQPALNQFTDPNNTSLTISGLSGRITESELEQHFIGFGDIIY 322
Query: 312 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
++ + G+V+F RS E A + G + ++++WG S
Sbjct: 323 CRVSRDYQTGYVKFYSRSATESAFLNMYGYMINDCRLQIAWGSS 366
>gi|336376899|gb|EGO05234.1| hypothetical protein SERLA73DRAFT_44756 [Serpula lacrymans var.
lacrymans S7.3]
Length = 523
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 152/300 (50%), Gaps = 26/300 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 74
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D T + +FVGDL+ +V D +L + F A + +
Sbjct: 75 TLNGRKIFDTE--IRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSA-FGTM 131
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K S
Sbjct: 132 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSVAV 191
Query: 262 QYPK-----------ASYQ------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
P ++Q +S V Q+ N+TV+VGNL T L LF
Sbjct: 192 ASPPRPGATGGAPAPINFQGGPLSYDSVVQQTPS--YNSTVYVGNLVPYCTQADLIPLFQ 249
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN-KQAQP 363
G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++ AQP
Sbjct: 250 SIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTTAQP 309
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSC 330
+ P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D
Sbjct: 9 EAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRA 68
Query: 331 AEEALRMLNGTQLGGQNIRLSW 352
AE AL+ LNG ++ IR++W
Sbjct: 69 AETALQTLNGRKIFDTEIRVNW 90
>gi|68485797|ref|XP_713179.1| hypothetical protein CaO19.9432 [Candida albicans SC5314]
gi|68485890|ref|XP_713133.1| hypothetical protein CaO19.1876 [Candida albicans SC5314]
gi|46434612|gb|EAK94016.1| hypothetical protein CaO19.1876 [Candida albicans SC5314]
gi|46434659|gb|EAK94062.1| hypothetical protein CaO19.9432 [Candida albicans SC5314]
Length = 452
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 145/282 (51%), Gaps = 13/282 (4%)
Query: 84 LWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+W+GDL W +E+ N + VK++R++ Y F+ F + + +Q
Sbjct: 85 MWMGDLDPQWTEESIDNLWTKLVSKPHHVKIMRDRLQPSKPSYCFVTFRDQESIDLAIQR 144
Query: 143 FNGTPMPNGEQNFRLNWA---SFGAGEKRDDTP-DHTIFVGDLAADVTDYMLQETFRARY 198
NG +P+ + F+LN++ S G+ ++ ++ +++IF+GDLA +V+D L F +Y
Sbjct: 145 -NGQKVPDSNRVFKLNYSGRNSTGSHDRSTNSSNEYSIFIGDLAPEVSDAALYNKFNMKY 203
Query: 199 PS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
P+ K AKV+ D T ++KG+GFV+F RA+ EM G ++ +R+G A
Sbjct: 204 PNQIKQAKVITDSSTRKSKGFGFVKFHSPDIMNRALKEMQGYNIGSKAIRVGLAAGSHVD 263
Query: 258 SGQQQYPKASYQNSQVAQSD------DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 311
+ + K + V QS DPNNT+ +G L +T+ L + F +G LV+
Sbjct: 264 TSFKPVTKLDHHRVPVPQSQPALNQFTDPNNTSFTIGGLSGRITESELEQHFIGFGDLVY 323
Query: 312 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353
++ + G+++F RS AE A + G + ++++WG
Sbjct: 324 CRVSKDYQTGYIKFYSRSAAESAFLNMYGFMINDCRLQITWG 365
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 25/188 (13%)
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
D +++GDL T+ + + K++ DRL Y FV F D+ E +
Sbjct: 82 DFQMWMGDLDPQWTEESIDNLWTKLVSKPHHVKIMRDRLQPSKPSYCFVTFRDQ-ESIDL 140
Query: 233 MTEMNG--VFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNL 290
+ NG V S R ++ + T S +S + N ++F+G+L
Sbjct: 141 AIQRNGQKVPDSNRVFKLNYSGRNSTGSHD--------------RSTNSSNEYSIFIGDL 186
Query: 291 DSIVTDEHLRELFSQY--GQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQ 342
V+D L F+ Q+ K+ K GFV+F AL+ + G
Sbjct: 187 APEVSDAALYNKFNMKYPNQIKQAKVITDSSTRKSKGFGFVKFHSPDIMNRALKEMQGYN 246
Query: 343 LGGQNIRL 350
+G + IR+
Sbjct: 247 IGSKAIRV 254
>gi|392597176|gb|EIW86498.1| hypothetical protein CONPUDRAFT_78829 [Coniophora puteana
RWD-64-598 SS2]
Length = 439
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 149/304 (49%), Gaps = 33/304 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYLDMRAAETALQ 77
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + +FVGDL+ +V D +L + F A + +
Sbjct: 78 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSGHFHVFVGDLSPEVNDEVLAKAFAA-FGTM 134
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K +
Sbjct: 135 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPAV 194
Query: 262 ------------------------QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 297
Q SY+ S V Q+ N+TV+VGNL T
Sbjct: 195 GAGAPAPRPGGGGGVGTAPAPINFQGGPLSYE-SVVQQTPS--YNSTVYVGNLVPYCTQA 251
Query: 298 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
L LF G L +++ A + FV+ A A+ L G + G+ I+ SWG+ +
Sbjct: 252 DLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRT 311
Query: 358 NKQA 361
+ QA
Sbjct: 312 DGQA 315
>gi|327299776|ref|XP_003234581.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
gi|326463475|gb|EGD88928.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
Length = 507
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 159/352 (45%), Gaps = 40/352 (11%)
Query: 36 QPSPYMMMMP------------PQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRT 83
Q +P M P P P A M + +P AAG V ++ R
Sbjct: 47 QTNPSHMPPPPLPPVVIPQNTNPIPTAITSPM-SGNMMSPTAAGGYV--RRSAPEPNKRA 103
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G L + E L F TG V +VK+I +N Q+ + YGFIE+ AER +Q
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLN-YGFIEYDDPGAAERAMQ 162
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT H IFVGDL+ +V D +L + F A S
Sbjct: 163 TLNGRRVHQSE--IRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSA-CGS 219
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K
Sbjct: 220 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 279
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P Q+ + TT +VGNL T L L
Sbjct: 280 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPL 339
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 340 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 391
>gi|449662778|ref|XP_004205609.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Hydra
magnipapillata]
Length = 336
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 103/175 (58%), Gaps = 4/175 (2%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTG-EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G + MDE ++ FA+ G +V+AVK I NK T + Y F++F A VL
Sbjct: 8 LWMGSISADMDEKFIKEAFANMGFKVLAVKEIFNKTTSERATYCFVDFGDIKTAREVLIK 67
Query: 143 FNGTPMPNGE-QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG +P E + F+LN + +G G D ++++FVGD+ +DV D L + FR +YPS
Sbjct: 68 LNGESIPGIEGKKFKLNRSEYGRGSSHSDGIEYSLFVGDITSDVNDNHLLDFFRIKYPSV 127
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNKK 255
+ AKVVID G KGYGFVRF +E E RA+TEM GV RP+R+ A K
Sbjct: 128 RAAKVVIDE-KGSHKGYGFVRFFNEEEINRALTEMQGVKGLGQRPIRVNKAVKSK 181
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
T +++G ++AD+ + ++E F K + ++ T Y FV FGD
Sbjct: 3 TESSWLWMGSISADMDEKFIKEAFANMGFKVLAVKEIFNKTTSERATYCFVDFGDIKTAR 62
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNL 290
+ ++NG I KK + +Y + S S D ++FVG++
Sbjct: 63 EVLIKLNG-------ESIPGIEGKKFKLNRSEYGRGS--------SHSDGIEYSLFVGDI 107
Query: 291 DSIVTDEHLRELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ-L 343
S V D HL + F + ++V + + K GFV+F + AL + G + L
Sbjct: 108 TSDVNDNHLLDFFRIKYPSVRAAKVVIDEKGSHKGYGFVRFFNEEEINRALTEMQGVKGL 167
Query: 344 GGQNIRLSWG---RSPSNKQAQ--PDPN 366
G + IR++ ++P N A DPN
Sbjct: 168 GQRPIRVNKAVKSKNPINAVASGLMDPN 195
>gi|357156104|ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 161/330 (48%), Gaps = 29/330 (8%)
Query: 45 PPQPQAQP-PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFA 103
P PQ P P + A P +G +PP R++++G++ + ++ L+ F
Sbjct: 42 PMFPQHHPHPGLLAAPQIEPIVSG-NLPPGFDSS--TCRSVYVGNIHLQVTDSLLHEVFQ 98
Query: 104 HTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG 163
G V K+IR +++ +GF+++ R A + + NG + Q ++NWA
Sbjct: 99 SIGPVEGCKLIRKEKSS----FGFVDYYDRRSAALAIVSLNGRQLFG--QPIKVNWAY-- 150
Query: 164 AGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
A +R+DT H IFVGDL +VTD L F A Y + A+V+ D+ TGR++G+GFV
Sbjct: 151 ASTQREDTSGHFNIFVGDLCPEVTDAALFAFFSA-YSTCSDARVMWDQKTGRSRGFGFVS 209
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ-------------YPKASYQ 269
F ++ + A+ E+NG + R +R AT ++Q +A +
Sbjct: 210 FRNQQDAQTAINELNGKWLGNRQIRCNWATKGANAGEEKQNTDSKGMVELINGSSEAGKE 269
Query: 270 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY--GQLVHVKIPAGKRCGFVQFAD 327
N+ +++P TTV+VGNL + + F G + V++ K GFV+++
Sbjct: 270 NANEDGPENNPQYTTVYVGNLPHDINSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYST 329
Query: 328 RSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
A A++ NG +GG+ I+ SWG P+
Sbjct: 330 HEEAALAIQTGNGQLVGGRQIKCSWGSKPT 359
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +L E F++ P +G K++ +GFV + D
Sbjct: 72 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGP-VEGCKLI----RKEKSSFGFVDYYDRRS 126
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG +P+++ + AS Q +D + +FVG
Sbjct: 127 AALAIVSLNGRQLFGQPIKV-------------NWAYAS------TQREDTSGHFNIFVG 167
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ G FV F ++ A+ A+ LNG
Sbjct: 168 DLCPEVTDAALFAFFSAYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINELNGKW 227
Query: 343 LGGQNIRLSWGRSPSN 358
LG + IR +W +N
Sbjct: 228 LGNRQIRCNWATKGAN 243
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 335
D +V+VGN+ VTD L E+F G + K+ ++ GFV + DR A A+
Sbjct: 72 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDRRSAALAI 131
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQ 360
LNG QL GQ I+++W + + ++
Sbjct: 132 VSLNGRQLFGQPIKVNWAYASTQRE 156
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 145/291 (49%), Gaps = 12/291 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E +L F GEV K+IR + Y F+EF + A A L
Sbjct: 8 KTLYVGNLDASVTEEFLCALFGQIGEVKGCKIIREPGN---DPYAFLEFTNHASAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA+ + + DT +H IFVGDL+ ++ ++L+E F A +
Sbjct: 65 AMNRRVFL--EKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
++V D T ++KGY FV F +++ A+ MNG + +R +R +T K G
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPTKGP 181
Query: 261 QQYPKASYQNSQ----VAQSDDDPNNTTVFVGNLDS-IVTDEHLRELFSQYGQLVHVKIP 315
+ +S + Q + P NTTV+ G S ++T+E ++ FSQ+GQ+ V++
Sbjct: 182 NEGAPSSKRVKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEELMQSTFSQFGQIQDVRVF 241
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPN 366
K F++F + A A+ + T++ G ++ WG+ + Q N
Sbjct: 242 RDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGKENGGTENQSTTN 292
>gi|326480772|gb|EGE04782.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton equinum CBS 127.97]
Length = 507
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 159/352 (45%), Gaps = 40/352 (11%)
Query: 36 QPSPYMMMMP------------PQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRT 83
Q +P M P P P A M + +P AAG V ++ R
Sbjct: 47 QTNPSHMPPPPLPPVVIPQNTNPIPTAITSPM-SGNMMSPTAAGGYV--RRSAPEPNKRA 103
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G L + E L F TG V +VK+I +N Q+ + YGFIE+ AER +Q
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLN-YGFIEYDDPGAAERAMQ 162
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT H IFVGDL+ +V D +L + F A S
Sbjct: 163 TLNGRRVHQSE--IRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSA-CGS 219
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K
Sbjct: 220 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 279
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P Q+ + TT +VGNL T L L
Sbjct: 280 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPL 339
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 340 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 391
>gi|351695933|gb|EHA98851.1| tRNA selenocysteine 1-associated protein 1 [Heterocephalus glaber]
Length = 262
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 102/152 (67%), Gaps = 6/152 (3%)
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAG 165
V++VK+IRN+ TG GY F+EF A AE+ L NG P+P + F+LN+A++G
Sbjct: 5 VMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG-- 62
Query: 166 EKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
++ D++P++++FVGDL DV D ML E F YPS +G KVV+D+ TG +KGYGFV+F D
Sbjct: 63 KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGISKGYGFVKFTD 121
Query: 226 ESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
E EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 ELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 153
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 23/159 (14%)
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
+ K++ +RLTG GY FV F D + + + ++NG +P+ G K+
Sbjct: 4 TVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----KPLP-GATPAKRFKLN 57
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY------GQLVHVK 313
Y K Q D+ P ++FVG+L V D L E F + G++V +
Sbjct: 58 YATYGK---------QPDNSP-EYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ 107
Query: 314 IPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 351
K GFV+F D + AL G LG + +RLS
Sbjct: 108 TGISKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 146
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 163/350 (46%), Gaps = 28/350 (8%)
Query: 26 QAPPQQQPPPQPSPYMMM--MPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRT 83
Q P PPP P ++ P P A M + +P +AG V ++ R
Sbjct: 37 QGNPSHMPPPPLPPVVIPQNTNPIPTAITSPM-SGNMMSPTSAGGYV--RRAAPEPNKRA 93
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
L++G L + E L F TG V +VK+I +K + + YGF+E+ AER +QT
Sbjct: 94 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSKGLN-YGFVEYDDPGAAERAMQTL 152
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTK 202
NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 153 NGRRVHQSE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGSVS 209
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-------- 254
A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K
Sbjct: 210 EARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQ 269
Query: 255 ----------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
T G +P Q+ + TT +VGNL T L LF
Sbjct: 270 QAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQ 329
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 330 NFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 379
>gi|409051430|gb|EKM60906.1| hypothetical protein PHACADRAFT_247129 [Phanerochaete carnosa
HHB-10118-sp]
Length = 425
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 167/356 (46%), Gaps = 55/356 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 73
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D T + +FVGDL+ +V D +L + F A + +
Sbjct: 74 TLNGRKIFDTE--IRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFAA-FGTL 130
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG-- 259
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT
Sbjct: 131 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQGAPP 189
Query: 260 -----------------------QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTD 296
Q SY+ S V Q+ N+TV+VGNL T
Sbjct: 190 PRAGNGGNGSDGGHGGGGAPAPMNFQGGPLSYE-SVVQQT--PAYNSTVYVGNLVPYATQ 246
Query: 297 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 356
L LF G L +++ A + FV+ A A+ L G + G+ I+ SWG+
Sbjct: 247 ADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDR 306
Query: 357 SNKQA------QPDPNQ---WNAGYYGYAQ--GYENYGYAAAAPQDPSMYYGGYPG 401
++ A P P N YG Q Y YG+ A YGG PG
Sbjct: 307 ADGGALTTGGMSPTPAAAPYGNMPMYGMPQPNSYGQYGFGA---------YGGAPG 353
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSC 330
+ P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D
Sbjct: 8 EAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRA 67
Query: 331 AEEALRMLNGTQLGGQNIRLSW 352
AE AL+ LNG ++ IR++W
Sbjct: 68 AETALQTLNGRKIFDTEIRVNW 89
>gi|291228731|ref|XP_002734335.1| PREDICTED: tRNA selenocysteine associated protein 1-like
[Saccoglossus kowalevskii]
Length = 303
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 117/183 (63%), Gaps = 8/183 (4%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
++W+GDL+ +MDE ++ FA GE V+ VK+IRNK T +GY F++F S A+ +L+
Sbjct: 4 SVWMGDLEPYMDEAFVIEAFASVGEKVLNVKIIRNKYTRIPQGYCFVDFGSDEIAKAILR 63
Query: 142 TFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+NG P+P N + F+LN+A++G + +P+ ++FVG+L +V + L E F RY
Sbjct: 64 KYNGKPLPGSNNSKRFKLNFAAYGQSYQ---SPEFSLFVGELTPEVDNCALHEFFAKRYY 120
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNKKTVS 258
+ K A VV+D + G ++GYGFVRF +E +Q RA+ EMN V + +++ AT K+ ++
Sbjct: 121 TCKAANVVLDPM-GHSRGYGFVRFSNEEDQQRALIEMNQVTGLGGKSIKVALATPKRPIT 179
Query: 259 GQQ 261
Q
Sbjct: 180 AVQ 182
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + E F + K++ ++ T +GY FV FG + +
Sbjct: 4 SVWMGDLEPYMDEAFVIEAFASVGEKVLNVKIIRNKYTRIPQGYCFVDFGSDEIAKAILR 63
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
+ NG +P+ P +N S + + A+Y QS P ++FVG L V
Sbjct: 64 KYNG-----KPL---PGSNN---SKRFKLNFAAY-----GQSYQSP-EFSLFVGELTPEV 106
Query: 295 TDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN-GTQLGGQN 347
+ L E F++ +V + + GFV+F++ + AL +N T LGG++
Sbjct: 107 DNCALHEFFAKRYYTCKAANVVLDPMGHSRGYGFVRFSNEEDQQRALIEMNQVTGLGGKS 166
Query: 348 IRLS 351
I+++
Sbjct: 167 IKVA 170
>gi|427778057|gb|JAA54480.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 257
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 116/208 (55%), Gaps = 28/208 (13%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
G TLW+GDL+ MDE ++ F+ GE V VK+IR++ TG GYGF++F AE
Sbjct: 3 GSASTLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAE 62
Query: 138 RVLQTFNGTPMPNGEQ--NFRLNWA--------------------SFGAGEK---RDDTP 172
R L NG P+PN Q FRLN A + G G + +
Sbjct: 63 RALLRCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSN 122
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ ++FVGDL+ADV D +L + F RYPS + AKVV+D TG +KG+GFVRF D +E A
Sbjct: 123 ELSMFVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDP-TGLSKGFGFVRFSDGTEYQEA 181
Query: 233 MTEM-NGVFCSTRPMRIGPATNKKTVSG 259
+ +M + + ++P+R+G A ++ +G
Sbjct: 182 LVDMQHSLLVGSKPIRVGVANPRRAAAG 209
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + +Y +Q+ F + K++ DRLTG +GYGF+ FGDE RA+
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 235 EMNGV----FCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVA-----QSDDDPNNTTV 285
NG + R+ A N G Q Q N ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 286 FVGNLDSIVTDEHLRELFSQ-YGQLVHVKI---PAG--KRCGFVQFADRSCAEEAL-RML 338
FVG+L + V D L + FSQ Y + K+ P G K GFV+F+D + +EAL M
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSDGTEYQEALVDMQ 186
Query: 339 NGTQLGGQNIRL 350
+ +G + IR+
Sbjct: 187 HSLLVGSKPIRV 198
>gi|331230317|ref|XP_003327823.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168138|ref|XP_003889766.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168140|ref|XP_003889767.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306813|gb|EFP83404.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167366|gb|EHS63397.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167367|gb|EHS63398.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 471
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 163/350 (46%), Gaps = 39/350 (11%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGA 136
G+ L++G+L + E L F+ G V VK+I RN Q G + YGF+E+ A
Sbjct: 106 GKRAHLYVGNLSPRVTEYMLQEIFSVAGPVQGVKIIPDRNFQHGGLN-YGFVEYYEMRSA 164
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWA--SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
E LQT G + + E R+NWA + + K D + + +FVGDL+ +V D +L + F
Sbjct: 165 ETALQTLGGRKIFDTE--IRVNWAYQNSQSNVKEDLSTHYHVFVGDLSPEVNDEVLAKAF 222
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
A + S A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K
Sbjct: 223 AA-FGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 281
Query: 255 KTVSGQQQYPKASY-----------------QNSQVAQSDDDPNNTTVFVGNLDSIVTDE 297
G P A N + NTTV+ GNL T
Sbjct: 282 N--QGMAATPGAVIAPGMGSGGMNRGGFGGATNYEAVVQQAPAYNTTVYTGNLVPYSTQA 339
Query: 298 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR--- 354
L LF +G +V +++ A + FV+ A A+ L GT + G+ ++ SWG+
Sbjct: 340 DLIPLFQGFGYIVEIRMQADRGFAFVKMDTHENAAMAIVNLTGTPVHGRPLKCSWGKDRA 399
Query: 355 --SPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGY 402
P++ A P AG YG Q Y PQ Y GYP Y
Sbjct: 400 SADPNSAPASGMPMAPVAGMYGMPQMY-------GMPQAGYPQYSGYPQY 442
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 161/342 (47%), Gaps = 45/342 (13%)
Query: 18 AHQYQYQQQAPPQ-----QQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPP 72
QY + Q PP+ QQ PPQ +P PP P
Sbjct: 2 TRQYDSRYQYPPRVPQLYQQRPPQQNPTETTEPPIPINANS------------------- 42
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+++ + + +DE L F+ G VV+ K++R+K +G GYGF+EF+
Sbjct: 43 ---------KSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDK-SGTHAGYGFVEFVD 92
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A +G + E ++NW S+ A ++++ + IFVG L +V D +L +
Sbjct: 93 STTARFAKDNMDGRVVYGRE--LKVNW-SYTA--QQENQGSYKIFVGGLQPEVNDDLLYK 147
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
TF+ ++ A+V+ TG++KGYGFV F + + AM MNG R +++ T
Sbjct: 148 TFQ-KFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVT 206
Query: 253 NKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 312
+ ++ + + PK SY ++ N TV++GN+ V + L++L ++YG + V
Sbjct: 207 S--NIASKTEQPKRSYDE---INNETSIQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEV 261
Query: 313 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
++ K F++F+ A A+ M NG + G +R SWGR
Sbjct: 262 RLNKDKGYAFIKFSKHESATSAILMCNGKIINGSTLRCSWGR 303
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 169/340 (49%), Gaps = 33/340 (9%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 2 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 56
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++
Sbjct: 57 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKS 114
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT
Sbjct: 115 AF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 173
Query: 253 NKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQY 306
K PK++ +NS +D P N TV+ G + S +TD+ +R+ FS +
Sbjct: 174 RKPPA------PKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPF 227
Query: 307 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QP 363
GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q
Sbjct: 228 GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQV 287
Query: 364 DPNQWNAGYYGYAQGYEN---YG-YAAAAPQDPSMYYGGY 399
D +QW ++Q Y N YG Y A Q PS YG Y
Sbjct: 288 DYSQWGQ----WSQVYGNPQQYGQYMANGWQVPS--YGMY 321
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 83 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 142
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 143 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSS 200
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 201 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 253
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 254 HAIVSVNGT 262
>gi|389742195|gb|EIM83382.1| polyadenylate-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 422
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 149/300 (49%), Gaps = 27/300 (9%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + +FVGDL+ +V D +L + F A + +
Sbjct: 77 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSNHFHVFVGDLSPEVNDDVLAKAFAA-FGTM 133
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ- 260
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT G
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQGGLP 192
Query: 261 -QQYPKASYQNSQVAQSDDDPN------------------NTTVFVGNLDSIVTDEHLRE 301
P AS + + N NTTV+VGNL T L
Sbjct: 193 VSGGPTASPTRTGAGGAPAPINFQGGPLSYESVVQQTPAFNTTVYVGNLVPYCTQSDLIP 252
Query: 302 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
LF G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++ A
Sbjct: 253 LFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQLVHGRPIKCSWGKDRADGGA 312
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSCAE 332
P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D AE
Sbjct: 13 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAE 72
Query: 333 EALRMLNGTQLGGQNIRLSW 352
AL+ LNG ++ IR++W
Sbjct: 73 TALQTLNGRKIFDTEIRVNW 92
>gi|225444659|ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis vinifera]
Length = 426
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 154/299 (51%), Gaps = 33/299 (11%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L F+ TG + K+IR +++ YGF+++ R A +
Sbjct: 53 CRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSS----YGFVDYFDRRSAALSI 108
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L F YP
Sbjct: 109 VTLNGRHLFG--QPIKVNWAY--ASSQREDTSGHYNIFVGDLSPEVTDATLFACFSV-YP 163
Query: 200 ST----KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
S + A+V+ D+ TGR++G+GFV F ++ E A+ ++NG + +R +R AT K
Sbjct: 164 SCSSGIRDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWLGSRQIRCNWAT--K 221
Query: 256 TVSGQQQYPKA-----------SYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLR 300
G + P + + ++ + +D+ P N TTV+VGNL VT L
Sbjct: 222 GAGGNEDKPNSDAKSVVELTNGTSEDGKDKSNDEAPENNLQYTTVYVGNLAPEVTSVDLH 281
Query: 301 ELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
F G + V++ K GFV+++ + A A++M N L G+ I+ SWG P+
Sbjct: 282 RHFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILCGKPIKCSWGSKPT 340
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 335
D +V+VGN+ VT+ L+E+FS G L K+ ++ GFV + DR A ++
Sbjct: 49 DSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSSYGFVDYFDRRSAALSI 108
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQ 360
LNG L GQ I+++W + S ++
Sbjct: 109 VTLNGRHLFGQPIKVNWAYASSQRE 133
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 155/319 (48%), Gaps = 53/319 (16%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI------------------------- 114
E RTL++G+L + E ++ T F G V KVI
Sbjct: 44 EPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDVSFSLWNKTNLYRKLLLARGIGV 103
Query: 115 ------------RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF 162
+ +TG + Y F+EF A + LQT N + + E ++NWA
Sbjct: 104 PGYKCTRRQPIHTDTETGSNDPYAFVEFSDHGQASQALQTMNKRLLLDRE--MKVNWAVE 161
Query: 163 -GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGF 220
G + + DT H +FVGDL+++V + L+E F+ + AKV+ D T ++KGYGF
Sbjct: 162 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP-FGDVSDAKVIRDTNTTKSKGYGF 220
Query: 221 VRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ----YPKASYQNSQVAQS 276
V + E RA+ +MNG + R +R AT K G Q+ Y + SY S
Sbjct: 221 VSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK---PGDQEKPSHYNEKSYDEIYNQTS 277
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALR 336
D NT+V+VGN+ S+ DE +R+ F+ +G++ V+I + FV+F ++ A +A+
Sbjct: 278 GD---NTSVYVGNIASLTEDE-IRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIV 333
Query: 337 MLNGTQLGGQNIRLSWGRS 355
+N +GGQ +R SWG++
Sbjct: 334 QMNNQDVGGQLVRCSWGKT 352
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 80/183 (43%), Gaps = 26/183 (14%)
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y T+ + D TG Y FV F D + +A+ MN R M++ A
Sbjct: 106 YKCTRRQPIHTDTETGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAVE---- 161
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--- 314
GQQQ S++ D + VFVG+L S V ++ LRE F +G + K+
Sbjct: 162 PGQQQ--------SKI----DTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRD 209
Query: 315 ---PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG-RSPSNKQAQPDPNQWNA 370
K GFV + R AE A+ +NG LG + IR +W R P + Q P+ +N
Sbjct: 210 TNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD---QEKPSHYNE 266
Query: 371 GYY 373
Y
Sbjct: 267 KSY 269
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 32/187 (17%)
Query: 71 PPQQQGQPGEIRT--LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P QQQ + R +++GDL +D L F G+V KVIR+ T + +GYGF+
Sbjct: 162 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 221
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------- 174
+ R AER ++ NG + G + R NWA+ G++ + P H
Sbjct: 222 SYPKREEAERAIEQMNGQWL--GRRTIRTNWATRKPGDQ--EKPSHYNEKSYDEIYNQTS 277
Query: 175 ----TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+++VG++A+ +T+ +++ F A + ++ + +GY FV+F ++
Sbjct: 278 GDNTSVYVGNIAS-LTEDEIRQGF-ASFGRITEVRIF------KMQGYAFVKFDNKDAAA 329
Query: 231 RAMTEMN 237
+A+ +MN
Sbjct: 330 KAIVQMN 336
>gi|217074564|gb|ACJ85642.1| unknown [Medicago truncatula]
gi|388521359|gb|AFK48741.1| unknown [Medicago truncatula]
Length = 407
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 151/296 (51%), Gaps = 24/296 (8%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V K+ R +++ YGFI + R A
Sbjct: 38 PSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEKSS----YGFIHYFDRRSAA 93
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ T NG + Q ++NWA + +G++ D + + IFVGDL+ +VTD L F
Sbjct: 94 LAILTLNGRHLFG--QPIKVNWA-YASGQREDTSGHYNIFVGDLSPEVTDATLFACFSV- 149
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT----- 252
Y S A+V+ D+ TGR++G+GFV F + + A+ ++ G + +R +R AT
Sbjct: 150 YQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATKVAGG 209
Query: 253 -----NKKTVSGQQQYPKASYQNSQVAQSD---DDPNNTTVFVGNLDSIVTDEHLRELFS 304
N + S + +S +++ +D ++P TTV+VGNL S T L F
Sbjct: 210 IEEKQNSDSKSVVELTNGSSEDGKEISGNDVPENNPQYTTVYVGNLGSEATQLDLHRHFH 269
Query: 305 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 357
G V V++ K GFV+++ + A A++M N + L G+ I+ SWG P+
Sbjct: 270 ALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSYLCGKIIKCSWGSKPT 325
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 157/327 (48%), Gaps = 30/327 (9%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
G +TL++G+L + E ++ T F GEV K+IR + Y F+EF S
Sbjct: 2 GDESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGN---DPYAFLEFTSHTA 58
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETF 194
A L N + + E ++NWA+ + + DT +H IFVGDL+ ++ ++L++ F
Sbjct: 59 AATALAAMNKRVVLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAF 116
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
A + ++V D T ++KGY FV F +++ A+ MNG + +R +R +T K
Sbjct: 117 -APFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRK 175
Query: 255 ---KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDS-IVTDEHLRELFSQYGQLV 310
K G +A + P NTTV+ G S ++T++ ++ FSQ+GQ+
Sbjct: 176 PPSKPNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQ 235
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR--------SPSNKQAQ 362
V++ K F++F + A A+ + T++ G ++ WG+ S +N A
Sbjct: 236 DVRVFRDKGYAFIRFTTKEAAAHAIEATHNTEISGHIVKCFWGKENGGGDNQSTNNATAA 295
Query: 363 PD----------PNQWNAGYYGYAQGY 379
P P Q GY+ YAQGY
Sbjct: 296 PPAMGAQTQYPYPYQQGMGYW-YAQGY 321
>gi|442760033|gb|JAA72175.1| Putative trna selenocysteine 1-associated protein 1 [Ixodes
ricinus]
Length = 226
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 116/207 (56%), Gaps = 26/207 (12%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
G TLW+GDL+ MDE ++ F GE V VK+IRN+ TG GYGF++F A+
Sbjct: 3 GSASTLWMGDLEPTMDEYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQ 62
Query: 138 RVLQTFNGTPMPNGEQ--NFRLNWASFGAG---------------------EKRDDTPDH 174
R L NG P+PN Q FRLN A+ G G ++ + +
Sbjct: 63 RALLRCNGRPIPNATQPKTFRLNHANNGTGTGGGGGGGGGGSYGNYSSGGRQQYGSSSEF 122
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++FVGDL+++V D L F RYPS K AKVV+D+ +G +KG+GFVRF DESE A+
Sbjct: 123 SMFVGDLSSEVDDGHLYHAFSQRYPSVKAAKVVLDQ-SGLSKGFGFVRFSDESEYQEALV 181
Query: 235 EM-NGVFCSTRPMRIGPATNKKTVSGQ 260
+M + + ++P+R+G A ++ G+
Sbjct: 182 DMQHSLLVGSKPIRVGVANPRRVADGR 208
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 14/190 (7%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + +Y +Q+ F + K++ +R+TG +GYGF+ FGDE RA+
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQRALL 66
Query: 235 EMNG--VFCSTRP--MRIGPATNKKTVSGQQQYPKASYQNSQVA---QSDDDPNNTTVFV 287
NG + +T+P R+ A N G + + Q + ++FV
Sbjct: 67 RCNGRPIPNATQPKTFRLNHANNGTGTGGGGGGGGGGSYGNYSSGGRQQYGSSSEFSMFV 126
Query: 288 GNLDSIVTDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEAL-RMLNG 340
G+L S V D HL FSQ ++V + K GFV+F+D S +EAL M +
Sbjct: 127 GDLSSEVDDGHLYHAFSQRYPSVKAAKVVLDQSGLSKGFGFVRFSDESEYQEALVDMQHS 186
Query: 341 TQLGGQNIRL 350
+G + IR+
Sbjct: 187 LLVGSKPIRV 196
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 145/273 (53%), Gaps = 12/273 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+++ + + +DE L F+ G VV+ K++R+K +G GYGF+EF+ A
Sbjct: 43 KSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDK-SGVHAGYGFVEFVDSTTARFAKD 101
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
+G + E ++NW S+ A ++++ ++ IFVG L +V D +L +TF+ ++
Sbjct: 102 NMDGRVVYGRE--LKVNW-SYTA--QQENQGNYKIFVGGLQPEVNDDLLYKTFQ-KFGRV 155
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ TG++KGYGFV F + + AM MNG R +++ T+ ++ +
Sbjct: 156 TDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTS--NIASKT 213
Query: 262 QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 321
+ PK SY ++ N TV++GN+ V + L++L ++YG + V++ K
Sbjct: 214 EQPKRSYDE---INNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYA 270
Query: 322 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
F++F+ A A+ M NG + G +R SWGR
Sbjct: 271 FIKFSKHESATSAILMCNGKIINGSTLRCSWGR 303
>gi|427786393|gb|JAA58648.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 225
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 116/208 (55%), Gaps = 28/208 (13%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
G TLW+GDL+ MDE ++ F+ GE V VK+IR++ TG GYGF++F AE
Sbjct: 3 GSASTLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAE 62
Query: 138 RVLQTFNGTPMPNGEQ--NFRLNWA--------------------SFGAGEK---RDDTP 172
R L NG P+PN Q FRLN A + G G + +
Sbjct: 63 RALLRCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSN 122
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ ++FVGDL+ADV D +L + F RYPS + AKVV+D TG +KG+GFVRF D +E A
Sbjct: 123 ELSMFVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDP-TGLSKGFGFVRFSDGTEYQEA 181
Query: 233 MTEM-NGVFCSTRPMRIGPATNKKTVSG 259
+ +M + + ++P+R+G A ++ +G
Sbjct: 182 LVDMQHSLLVGSKPIRVGVANPRRAAAG 209
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + +Y +Q+ F + K++ DRLTG +GYGF+ FGDE RA+
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 235 EMNGV----FCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVA-----QSDDDPNNTTV 285
NG + R+ A N G Q Q N ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 286 FVGNLDSIVTDEHLRELFSQ-YGQLVHVKI---PAG--KRCGFVQFADRSCAEEAL-RML 338
FVG+L + V D L + FSQ Y + K+ P G K GFV+F+D + +EAL M
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSDGTEYQEALVDMQ 186
Query: 339 NGTQLGGQNIRL 350
+ +G + IR+
Sbjct: 187 HSLLVGSKPIRV 198
>gi|427778771|gb|JAA54837.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 217
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 116/208 (55%), Gaps = 28/208 (13%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
G TLW+GDL+ MDE ++ F+ GE V VK+IR++ TG GYGF++F AE
Sbjct: 3 GSASTLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAE 62
Query: 138 RVLQTFNGTPMPNGEQ--NFRLNWA--------------------SFGAGEK---RDDTP 172
R L NG P+PN Q FRLN A + G G + +
Sbjct: 63 RALLRCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSN 122
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ ++FVGDL+ADV D +L + F RYPS + AKVV+D TG +KG+GFVRF D +E A
Sbjct: 123 ELSMFVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDP-TGLSKGFGFVRFSDGTEYQEA 181
Query: 233 MTEM-NGVFCSTRPMRIGPATNKKTVSG 259
+ +M + + ++P+R+G A ++ +G
Sbjct: 182 LVDMQHSLLVGSKPIRVGVANPRRAAAG 209
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + +Y +Q+ F + K++ DRLTG +GYGF+ FGDE RA+
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 235 EMNGV----FCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVA-----QSDDDPNNTTV 285
NG + R+ A N G Q Q N ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 286 FVGNLDSIVTDEHLRELFSQ-YGQLVHVKI---PAG--KRCGFVQFADRSCAEEAL-RML 338
FVG+L + V D L + FSQ Y + K+ P G K GFV+F+D + +EAL M
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSDGTEYQEALVDMQ 186
Query: 339 NGTQLGGQNIRL 350
+ +G + IR+
Sbjct: 187 HSLLVGSKPIRV 198
>gi|226500040|ref|NP_001150056.1| LOC100283683 [Zea mays]
gi|195636346|gb|ACG37641.1| nucleolysin TIAR [Zea mays]
Length = 421
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 149/291 (51%), Gaps = 23/291 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + +T L F G V K+IR +++ +GFI++ R A +
Sbjct: 74 CRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYAALAI 129
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
+ NG + Q ++NWA R+DT H IFVGDL +VTD L F Y
Sbjct: 130 LSLNGRQLYG--QPIKVNWAY--TSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSG-YS 184
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN------ 253
+ A+V+ D+ TGR++G+GFV F ++ + A+ ++NG + R +R AT
Sbjct: 185 TCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGE 244
Query: 254 -KKTVSGQQQYPKASYQNSQVAQSDDDPNN----TTVFVGNL--DSIVTDEHLRELFSQY 306
K+ + + S ++ + +DD P N TTV+VGNL ++ + D HL
Sbjct: 245 EKQILDTKVDLSNGSSESGKENPNDDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSLGA 304
Query: 307 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G + V++ K GFV+++ A A++M NG +GG+ I+ SWG P+
Sbjct: 305 GSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKCSWGSKPT 355
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +LQE F++ P +G K++ +GF+ + D
Sbjct: 70 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGP-VEGCKLI----RKEKSSFGFIDYYDRRY 124
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG +P+++ A P+ +D + +FVG
Sbjct: 125 AALAILSLNGRQLYGQPIKVNWAYTST--------PR-----------EDTSGHFNIFVG 165
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ G FV F ++ A+ A+ LNG
Sbjct: 166 DLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKW 225
Query: 343 LGGQNIRLSWGRSPSN 358
LG + IR +W +N
Sbjct: 226 LGNRQIRCNWATKGAN 241
>gi|125549809|gb|EAY95631.1| hypothetical protein OsI_17488 [Oryza sativa Indica Group]
Length = 263
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/139 (52%), Positives = 89/139 (64%), Gaps = 28/139 (20%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQL 343
T+FVG LD VT++ L+++F+ YG++VHVKIP GKRCGFVQ+ +R AE+AL +L GT +
Sbjct: 123 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLI 182
Query: 344 GGQNIRLSWGRSPSNKQAQPDPNQWNA----------------GYYGYAQGYENYGYAAA 387
GGQN+RLSWGRS SNKQ Q D NQW A Y GYAQ
Sbjct: 183 GGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYYSGYGQGYEAYGGYAQ---------- 232
Query: 388 APQDPSMY-YGGYPGYGNY 405
PQDP+MY YG Y GY NY
Sbjct: 233 -PQDPNMYGYGAYAGYPNY 250
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L FA GEVV VK+ K+ GF+++++R AE+ L
Sbjct: 123 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRC------GFVQYVNRPSAEQALAV 176
Query: 143 FNGTPMPNGEQNFRLNW 159
GT + G QN RL+W
Sbjct: 177 LQGTLI--GGQNVRLSW 191
>gi|357514131|ref|XP_003627354.1| RNA-binding protein [Medicago truncatula]
gi|355521376|gb|AET01830.1| RNA-binding protein [Medicago truncatula]
Length = 389
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 151/296 (51%), Gaps = 24/296 (8%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V K+ R +++ YGFI + R A
Sbjct: 20 PSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEKSS----YGFIHYFDRRSAA 75
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ T NG + Q ++NWA + +G++ D + + IFVGDL+ +VTD L F
Sbjct: 76 LAILTLNGRHLFG--QPIKVNWA-YASGQREDTSGHYNIFVGDLSPEVTDATLFACFSV- 131
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT----- 252
Y S A+V+ D+ TGR++G+GFV F + + A+ ++ G + +R +R AT
Sbjct: 132 YQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATKGAGG 191
Query: 253 -----NKKTVSGQQQYPKASYQNSQVAQSD---DDPNNTTVFVGNLDSIVTDEHLRELFS 304
N + S + +S +++ +D ++P TTV+VGNL S T L F
Sbjct: 192 IEEKQNSDSKSVVELTNGSSEDGKEISSNDVPENNPQYTTVYVGNLGSEATQLDLHRHFH 251
Query: 305 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 357
G V V++ K GFV+++ + A A++M N + L G+ I+ SWG P+
Sbjct: 252 ALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSYLCGKIIKCSWGSKPT 307
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 30/190 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +LQE F P +G K+ YGF+ + D
Sbjct: 19 DPSTCRSVYVGNVHTQVTEPLLQEVFAGTGP-VEGCKL----FRKEKSSYGFIHYFDRRS 73
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG +P+++ N SGQ+ +D + +FVG
Sbjct: 74 AALAILTLNGRHLFGQPIKV----NWAYASGQR---------------EDTSGHYNIFVG 114
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ GFV F + A+ A+ L G
Sbjct: 115 DLSPEVTDATLFACFSVYQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKW 174
Query: 343 LGGQNIRLSW 352
LG + IR +W
Sbjct: 175 LGSRQIRCNW 184
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 184/405 (45%), Gaps = 37/405 (9%)
Query: 26 QAPPQQQPPPQPSPYMMM--MPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRT 83
Q P PPP P ++ P P A M + +P +AG V ++ R
Sbjct: 37 QGNPSHMPPPPLPPVVIPQNTNPIPTAITSPM-SGNMMSPTSAGGYV--RRAAPEPNKRA 93
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G L + E L F TG V +VK+I +N Q+ + YGF+E+ AER +Q
Sbjct: 94 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNFQSKGLN-YGFVEYDDPGAAERAMQ 152
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 153 TLNGRRVHQSE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 209
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K
Sbjct: 210 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 269
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P Q+ + TT +VGNL T L L
Sbjct: 270 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPL 329
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS-PSNKQA 361
F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+ P Q
Sbjct: 330 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTGQF 389
Query: 362 QPDPNQ-----WNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPG 401
P Q +N+G +G++ G A P P YG PG
Sbjct: 390 DYSPQQGANPAFNSGPNPAGRGWDQSG-ANFGPGMPGQGYGQVPG 433
>gi|328863696|gb|EGG12795.1| hypothetical protein MELLADRAFT_73862 [Melampsora larici-populina
98AG31]
Length = 477
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 166/373 (44%), Gaps = 57/373 (15%)
Query: 76 GQPGEIRT-LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFIS 132
G P R L++G+L + E L F+ G V VK+I RN Q G + YGF+E+
Sbjct: 101 GHPEAKRAHLYVGNLSPRVTEYMLQEIFSVAGSVQGVKIIPDRNFQHGGLN-YGFVEYYE 159
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWA---SFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
AE LQT G + + E R+NWA S K D + +FVGDL+ +V D +
Sbjct: 160 MRSAETALQTLGGRKIFDNE--IRVNWAYQNSQQNAVKEDLSGHFHVFVGDLSPEVNDDV 217
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L + F A + S A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+
Sbjct: 218 LAKAFAA-FGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVN 276
Query: 250 PATNKK-----------------------TVSGQQQYPKASYQNSQVAQSDDDPN-NTTV 285
A K +G NS A P N+TV
Sbjct: 277 WANQKNQGMPGAPGSAMGGGNMGGMNGGMNRAGGGGGGGGFGANSYEAVVQQAPAYNSTV 336
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
+ GNL T L LF +G +V +++ A + FV+ A A+ L GT + G
Sbjct: 337 YTGNLVPYCTQADLIPLFQGFGYIVEIRMQADRGFAFVKLDTHENAAMAIVNLTGTPVHG 396
Query: 346 QNIRLSWGRSPSNKQAQPDPNQWN---------AGYYGYAQGYENYGYAAAAPQDPSMYY 396
+ ++ SWG+ +A DPN AG YG Q Y P Y
Sbjct: 397 RPLKCSWGK----DRASADPNSATNPAMAMAPVAGMYGMPQMYGM----------PQPGY 442
Query: 397 GGYPGYGNYQQPQ 409
G YPGY Y PQ
Sbjct: 443 GQYPGYPQYGAPQ 455
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 146/310 (47%), Gaps = 22/310 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E L F+ G V K+IR + Y F+EF + A L
Sbjct: 8 RTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGN---DPYAFVEFTNHQSAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSFLDKE--MKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
++V D T ++KGY FV F +SE A+ MNG + +R +R +T K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 261 QQ--YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
++ + S N + + P N TV+ G + +TDE +++ FS +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDK 241
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS---------PSNKQAQPDPNQWN 369
F++F + A A+ + T++ G ++ WG+ +N QAQ Q
Sbjct: 242 GYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQ----QVT 297
Query: 370 AGYYGYAQGY 379
AG YA GY
Sbjct: 298 AGVGQYAYGY 307
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEE 333
++ N T++VGNLD+ V+++ L LFSQ G + KI P FV+F + A
Sbjct: 2 SEESNPRTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQSAAT 61
Query: 334 ALRMLNGTQLGGQNIRLSWGRSPSNK 359
AL +N + ++++W SP N+
Sbjct: 62 ALAAMNKRSFLDKEMKVNWATSPGNQ 87
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 144/278 (51%), Gaps = 14/278 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E L F + G V A KVIR + + Y F+EF + +GA L
Sbjct: 8 RTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGS---DPYAFLEFDTHSGAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
NG + E ++NWA+ + + DT +H IFVGDL+ ++ + L+E F A +
Sbjct: 65 AMNGRLFLDKE--MKVNWATTPGNQPKLDTSNHYHIFVGDLSPEIETHTLKEAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KT 256
++V D T ++KGY FV F +S+ A+ MNG + +R +R +T K +
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMNGQWLGSRSIRTNWSTRKPPPPRA 181
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 316
+ Y ++ + + P N TV+ G + +T+E + ++FS++G +V ++
Sbjct: 182 PNKYSGYRAVTFDD---VYNQSSPTNCTVYCGGIVEGLTEELVEQVFSRFGTIVEIRAFR 238
Query: 317 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
K F++F+ + A A+ ++ T++ G ++ WG+
Sbjct: 239 DKGYAFIKFSTKEAATTAIEAVHNTEINGHPVKCFWGK 276
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 35/237 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D++ T++VG+L VT+ +L F P KV+ R G + Y F+ F S
Sbjct: 3 DESNPRTLYVGNLDPSVTEELLCALFTNIGP-VNACKVI--REPG-SDPYAFLEFDTHSG 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ MNG + M++ N T G Q PK D N+ +FVG
Sbjct: 59 AATALAAMNGRLFLDKEMKV----NWATTPGNQ--PKL-----------DTSNHYHIFVG 101
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L + L+E F+ +G++ + +I K FV F +S AE A+ +NG
Sbjct: 102 DLSPEIETHTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMNGQW 161
Query: 343 LGGQNIRLSWG-RSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG 398
LG ++IR +W R P +A PN+ Y GY + Y ++P + ++Y GG
Sbjct: 162 LGSRSIRTNWSTRKPPPPRA---PNK----YSGYRAVTFDDVYNQSSPTNCTVYCGG 211
>gi|118918389|ref|NP_001036895.2| TIA1 cytotoxic granule-associated RNA binding protein [Bombyx mori]
gi|111608113|gb|ABH10800.1| nucleolysin TIAR protein [Bombyx mori]
Length = 402
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 141/279 (50%), Gaps = 12/279 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E +L T F G+V K+IR + Y F+EF A L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN---DPYAFLEFTCHTAAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPS 200
N + + E ++NWA+ + + DT +H IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMNKRVVLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
++V D T ++KGY FV F +++ A+ MNG + +R +R +T K G
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 261 QQYPKASYQNSQ----VAQSDDDPNNTTVFVGNLDS-IVTDEHLRELFSQYGQLVHVKIP 315
+ +S + Q + P NTTV+ G S I+T+E ++ FSQ+GQ+ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
K F++F + A A+ + T++ G ++ WG+
Sbjct: 242 RDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGK 280
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 145/273 (53%), Gaps = 12/273 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+++ + + +DE L F+ G VV+ K++R+K +G GYGF+EF+ A
Sbjct: 43 KSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDK-SGVHAGYGFVEFVDSTTARFAKD 101
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
+G + E ++NW S+ A ++++ ++ IFVG L +V D +L +TF+ ++
Sbjct: 102 NMDGRVVYGRE--LKVNW-SYTA--QQENQGNYKIFVGGLQPEVNDDLLYKTFQ-KFGRV 155
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ TG++KGYGFV F + + AM MNG R +++ T+ ++ +
Sbjct: 156 TDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTS--NIASKT 213
Query: 262 QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 321
+ PK SY ++ N TV++GN+ V + L++L ++YG + V++ K
Sbjct: 214 EQPKRSYDE---INNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYA 270
Query: 322 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
F++F+ A A+ M NG + G +R SWGR
Sbjct: 271 FIKFSKHESATSAILMCNGKIINGSTLRCSWGR 303
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 159/312 (50%), Gaps = 28/312 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---- 177
Query: 262 QYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
PK++Y+++ S D+ PNN TV+ G + S +T++ +R+ FS +GQ++ +++
Sbjct: 178 --PKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 235
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ----PDP 365
K FV+F+ A A+ +NGT + G ++ WG+ +P +Q Q P
Sbjct: 236 PDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTY 295
Query: 366 NQWNAGYYGYAQ 377
QW +YG AQ
Sbjct: 296 GQWGQ-WYGNAQ 306
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 28/191 (14%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + + G++ K ++ + +Q D N+ VFV
Sbjct: 58 HAAAALAAMNG----------------RKIMGKE--VKVNWATTPSSQKKDTSNHFHVFV 99
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 100 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 159
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 160 WLGGRQIRTNW 170
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 200 PNNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|297829972|ref|XP_002882868.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
gi|297328708|gb|EFH59127.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 159/318 (50%), Gaps = 36/318 (11%)
Query: 67 GVAVPPQQQ----------GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
GV PPQ + P R++++G++ + E L F TG V + K+IR
Sbjct: 36 GVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRK 95
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTI 176
++ YGF+ + R A + + NG + Q ++NWA + G++ D + I
Sbjct: 96 DKSS----YGFVHYFDRRSAALAILSLNGRHLFG--QPIKVNWA-YATGQREDTSSHFNI 148
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
FVGDL+ +VTD L ++F + S A+V+ D+ TGR++G+GFV F ++ + A+ EM
Sbjct: 149 FVGDLSPEVTDATLYQSFSV-FSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 207
Query: 237 NGVFCSTRPMRIGPAT-------NKKTVSGQQ--QYPKASYQNSQVAQSDDDPNN----T 283
NG + S+R +R AT +K + G+ + S ++ + +++ P N T
Sbjct: 208 NGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEEAPENNSQFT 267
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGT 341
TV+VGNL VT L F G V V++ K GFV++ A A++M N T
Sbjct: 268 TVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAIQMGN-T 326
Query: 342 Q--LGGQNIRLSWGRSPS 357
Q L + I+ SWG P+
Sbjct: 327 QPYLFNRQIKCSWGNKPT 344
>gi|259648117|dbj|BAI40366.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 142/285 (49%), Gaps = 12/285 (4%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
G +TL++G+L + E +L T F G+V K+IR + Y F+EF
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN---DPYAFLEFTCHTA 58
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETF 194
A L N + + E ++NWA+ + + DT +H IFVGDL+ ++ +L+E F
Sbjct: 59 AATALAAMNKRVVLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF 116
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
A + ++V D T ++KGY FV F +++ A+ MNG + +R +R +T K
Sbjct: 117 -APFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRK 175
Query: 255 KTVSGQQQYPKASYQNSQ----VAQSDDDPNNTTVFVGNLDS-IVTDEHLRELFSQYGQL 309
G + +S + Q + P NTTV+ G S I+T+E ++ FSQ+GQ+
Sbjct: 176 PPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQI 235
Query: 310 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+++ K F++F + A A+ + T++ G ++ WG+
Sbjct: 236 QDIRVFRDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGK 280
>gi|297742974|emb|CBI35841.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 152/293 (51%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L FA TG V K++R +++ YGFI + R A +
Sbjct: 39 CRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSS----YGFIHYFDRRSAALAI 94
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + Q ++NWA + +G++ D + IFVGDL+ +VTD L F +PS
Sbjct: 95 LSLNGRHLFG--QPIKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-FPS 150
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT +
Sbjct: 151 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDITGKWLGSRQIRCNWATKGAGSNDD 210
Query: 261 QQYPKA---------SYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQYG 307
+Q A S ++ + +++ P+N TTV+VGNL VT L F +G
Sbjct: 211 KQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYTTVYVGNLAPEVTQLDLHRHFHTFG 270
Query: 308 QLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 357
V V++ K GFV++ + A A++M N + L G+ I+ SWG P+
Sbjct: 271 AGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNTQSILCGKPIKCSWGSKPT 323
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 143/287 (49%), Gaps = 14/287 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L T F+ G V K+IR + Y F+EF + A L
Sbjct: 8 KTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGN---DPYAFVEFTNHQSASTALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA+ G K+D + H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRLFLDKE--MKVNWATSPGNQPKQDTSNHHHIFVGDLSPEIETETLREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KT 256
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K KT
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPKT 181
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 316
Q+ + ++ + P N TV+ G + +T++ +++ FSQ+G + +++
Sbjct: 182 EKAAQRAKQPTFDE---VYNQSSPTNCTVYCGGFTTGLTEDLMQKTFSQFGVIQDIRVFK 238
Query: 317 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP 363
K F++FA + A A+ ++ T++ GQ ++ WG+ A P
Sbjct: 239 DKGYAFIKFATKESATHAIETIHNTEINGQMVKCFWGKENGGMGADP 285
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 334
D+ + T++VGNLD V+++ L LFSQ G + KI P FV+F + A A
Sbjct: 3 DESHPKTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSASTA 62
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 367
L +N + ++++W SP N+ Q N
Sbjct: 63 LAAMNKRLFLDKEMKVNWATSPGNQPKQDTSNH 95
>gi|449446638|ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 420
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 150/306 (49%), Gaps = 29/306 (9%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L F+ G + K+IR +++ YGF+++ R A +
Sbjct: 45 CRSVYVGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSS----YGFVDYFDRRSAAVSI 100
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
+ NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L F YP
Sbjct: 101 ISLNGRNLFG--QPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 155
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S A+V+ D+ TGR++GYGFV F +E + A+ ++NG + +R +R AT
Sbjct: 156 SCSDARVMWDQKTGRSRGYGFVAFRNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGD 215
Query: 260 QQQ---------YPKASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY 306
+Q + Q ++D P N TTV+VGNL VT L F
Sbjct: 216 DKQSSDSRSVVELTSGTSDGGQEKSNEDAPENNPQYTTVYVGNLAPEVTSVDLHRYFHAL 275
Query: 307 --GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP----SNKQ 360
G + V++ K GFV+++ + A A++ N + G+ I+ SWG P +N
Sbjct: 276 GAGTIEDVRVQRDKGFGFVRYSTNAEAALAIQTGNARVVCGKPIKCSWGSKPTPPGTNST 335
Query: 361 AQPDPN 366
P PN
Sbjct: 336 PLPPPN 341
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +LQE F + P +G K++ YGFV + D
Sbjct: 41 DSSTCRSVYVGNIHPQVTEPLLQEVFSSIGP-IEGCKLI----RKEKSSYGFVDYFDRRS 95
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
++ +NG +P+++ A Y +S Q +D + +FVG
Sbjct: 96 AAVSIISLNGRNLFGQPIKVNWA----------------YASS---QREDTSGHFNIFVG 136
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ GFV F + A+ A+ +NG
Sbjct: 137 DLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFRNEQDAQSAINDINGKW 196
Query: 343 LGGQNIRLSWGRSPSN 358
LG + IR +W +N
Sbjct: 197 LGSRQIRCNWATKGAN 212
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 335
D +V+VGN+ VT+ L+E+FS G + K+ ++ GFV + DR A ++
Sbjct: 41 DSSTCRSVYVGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSI 100
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQ 360
LNG L GQ I+++W + S ++
Sbjct: 101 ISLNGRNLFGQPIKVNWAYASSQRE 125
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 137/273 (50%), Gaps = 5/273 (1%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F G + K+I + T + Y F+EF A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVD--TAGNDPYCFVEFYDHRHAAASLA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKTT 181
Query: 262 QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 321
+ + + + S P+N TV+ G + S +T++ +R+ FS +GQ++ V++ K
Sbjct: 182 YESNSKHLSFEEVMSQSSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPDKGYS 241
Query: 322 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
FV+F A A+ +NGT + G ++ WG+
Sbjct: 242 FVRFNSHESAAHAIVSVNGTSIDGHVVKCYWGK 274
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 28/191 (14%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
DD P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F D
Sbjct: 2 EDDQP-RTLYVGNLSRDVTEPLILQVFTQIGP-CKSCKMIVD--TAGNDPYCFVEFYDHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
++ MNG + + G++ K ++ + +Q D N+ VFV
Sbjct: 58 HAAASLAAMNG----------------RKIMGKE--VKVNWATTPTSQKKDTSNHFHVFV 99
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 100 GDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQ 159
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 160 WLGGRQIRTNW 170
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 83 TPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVS 142
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDDT 171
F ++ AE +Q G + G + R NWA SF +
Sbjct: 143 FFNKWDAENAIQHMGGQWL--GGRQIRTNWATRKPPAPKTTYESNSKHLSFEEVMSQSSP 200
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
+ T++ G +++ +T+ ++++TF A + +V D KGY FVRF
Sbjct: 201 SNCTVYCGGVSSGLTEQLMRQTFSA-FGQIMEVRVFPD------KGYSFVRFNSHESAAH 253
Query: 232 AMTEMNGV 239
A+ +NG
Sbjct: 254 AIVSVNGT 261
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCA 331
DD P T++VGNL VT+ + ++F+Q G K+ AG C FV+F D A
Sbjct: 3 DDQPR--TLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYC-FVEFYDHRHA 59
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
+L +NG ++ G+ ++++W +P++++
Sbjct: 60 AASLAAMNGRKIMGKEVKVNWATTPTSQK 88
>gi|225442061|ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 420
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 159/317 (50%), Gaps = 34/317 (10%)
Query: 67 GVAVPPQQQGQPG----------EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
G+ PPQ + P R++++G++ + E L FA TG V K++R
Sbjct: 28 GLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRK 87
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTI 176
+++ YGFI + R A + + NG + Q ++NWA + +G++ D + I
Sbjct: 88 EKSS----YGFIHYFDRRSAALAILSLNGRHLFG--QPIKVNWA-YASGQREDTSGHFNI 140
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
FVGDL+ +VTD L F +PS A+V+ D+ TGR++G+GFV F ++ + A+ ++
Sbjct: 141 FVGDLSPEVTDATLFACFSV-FPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDI 199
Query: 237 NGVFCSTRPMRIGPATNKKTVSGQQQYPKA---------SYQNSQVAQSDDDPNN----T 283
G + +R +R AT + +Q A S ++ + +++ P+N T
Sbjct: 200 TGKWLGSRQIRCNWATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYT 259
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG- 340
TV+VGNL VT L F +G V V++ K GFV++ + A A++M N
Sbjct: 260 TVYVGNLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNTQ 319
Query: 341 TQLGGQNIRLSWGRSPS 357
+ L G+ I+ SWG P+
Sbjct: 320 SILCGKPIKCSWGSKPT 336
>gi|327296686|ref|XP_003233037.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
gi|326464343|gb|EGD89796.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
Length = 224
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 93/185 (50%), Gaps = 32/185 (17%)
Query: 207 VIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKA 266
+ D +TG ++GYGFVRF DE++Q RA++EM GV+C RPMRI AT K P
Sbjct: 1 MTDPITGLSRGYGFVRFSDETDQQRALSEMQGVYCGNRPMRISTATPKNKGPAGPGGPAH 60
Query: 267 SYQNS--------------------------------QVAQSDDDPNNTTVFVGNLDSIV 294
Q DPNNTTVFVG L V
Sbjct: 61 MGVPGGPPGGMYPPSMGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYV 120
Query: 295 TDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
T++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGR
Sbjct: 121 TEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR 180
Query: 355 SPSNK 359
S +N
Sbjct: 181 SQNNS 185
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L ++ E L + F GE+ VK+ K G GF++F+ R AE +
Sbjct: 110 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQ 163
Query: 143 FNGTPMPNGEQNFRLNWA 160
G P+ G RL+W
Sbjct: 164 MQGYPI--GNSRVRLSWG 179
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 156/330 (47%), Gaps = 40/330 (12%)
Query: 98 LNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNF 155
L FA G V VK+I RN Q G + YGF+E++ AE LQT NG + + E
Sbjct: 2 LTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQTLNGRKIFDTE--I 58
Query: 156 RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRT 215
R+NWA G K D + + +FVGDL+ +V D +L + F A + + A+V+ D +G++
Sbjct: 59 RVNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDDVLAKAFSA-FGTLSDARVMWDMNSGKS 117
Query: 216 KGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----------KTVSGQQQYPK 265
+GYGF+ F D+++ +A+ MNG + +R +R+ A K +T G
Sbjct: 118 RGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPAGPPRTGMGGGAPAP 177
Query: 266 ASYQNSQVAQSD----DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 321
++Q ++ NTTV+VGNL T L LF G L +++ A +
Sbjct: 178 MNFQGGPLSYESVVQQTPAYNTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQADRGFA 237
Query: 322 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQPDPNQ---WNAGY 372
FV+ A A+ L G + G+ I+ SWG+ + S+ P P N
Sbjct: 238 FVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRDSGAALSSGSLSPTPTAAPYANVPM 297
Query: 373 YGYAQ--GYENYGYAAAAPQDPSMYYGGYP 400
YG Q Y YG+ A YGG+P
Sbjct: 298 YGMPQPNTYGQYGFGA---------YGGFP 318
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL +++ L F+ G + +V+ + +G+ GYGF+ F + AE+ + T
Sbjct: 79 VFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 138
Query: 144 NGTPMPNGEQNFRLNWAS 161
NG + G + R+NWA+
Sbjct: 139 NGEWL--GSRAIRVNWAN 154
>gi|443924183|gb|ELU43247.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 498
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 148/305 (48%), Gaps = 38/305 (12%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 48 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGG-QNYGFVEYMDMRAAETALQ 106
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + + +FVGDL+ +V D +L + F A + S
Sbjct: 107 TLNGRKIFDTE--IRVNWAYQGTQNKEDTSNHYHVFVGDLSPEVNDEVLAKAFAA-FGSL 163
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K G
Sbjct: 164 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQSGGGG 223
Query: 262 -----------------------------QYPKASYQNSQVAQSDDDPNNTTVFVGNLDS 292
Q SY+ S V+Q+ NTTV+VGNL
Sbjct: 224 GMPPGMPSMGDSMGMGGGAMGGVPAPMNFQGGPLSYE-SVVSQT--PAYNTTVYVGNLVP 280
Query: 293 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352
T L LF G L +++ A + FV+ A A+ L G + G+ I+ SW
Sbjct: 281 YCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHENAAMAIVQLQGQLVHGRPIKCSW 340
Query: 353 GRSPS 357
G+ S
Sbjct: 341 GKDRS 345
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 273 VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQF 325
S + P ++VGNL VT+ L E+F+ G + HVKI G+ GFV++
Sbjct: 36 TCSSAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGQNYGFVEY 95
Query: 326 ADRSCAEEALRMLNGTQLGGQNIRLSW 352
D AE AL+ LNG ++ IR++W
Sbjct: 96 MDMRAAETALQTLNGRKIFDTEIRVNW 122
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 164/352 (46%), Gaps = 30/352 (8%)
Query: 26 QAPPQQQPPPQPSPYMMM--MPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRT 83
Q P PPP P ++ P P A M + +P +AG V ++ R
Sbjct: 37 QGNPSHMPPPPLPPVVIPQNTNPIPTAITSPM-SGNMMSPTSAGGYV--RRAAPEPNKRA 93
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G L + E L F TG V +VK+I +N Q+ + YGF+E+ AER +Q
Sbjct: 94 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNFQSKGLN-YGFVEYDDPGAAERAMQ 152
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 153 TLNGRRVHQSE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 209
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K
Sbjct: 210 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 269
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P Q+ + TT +VGNL T L L
Sbjct: 270 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPL 329
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 330 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 381
>gi|357479381|ref|XP_003609976.1| RNA-binding protein [Medicago truncatula]
gi|355511031|gb|AES92173.1| RNA-binding protein [Medicago truncatula]
Length = 415
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 153/302 (50%), Gaps = 34/302 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + E L F+ G + K+IR +++ YGF+++ R+ A +
Sbjct: 46 RSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSS----YGFVDYFDRSSAAIAIV 101
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + Q+ ++NWA + G++ D + IFVGDL+ +VTD L F A Y S
Sbjct: 102 TLNGRNIFG--QSIKVNWA-YTRGQREDTSGHFHIFVGDLSPEVTDATLYACFSA-YSSC 157
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D+ TGR++G+GFV F ++ E A+ ++ G + +R +R AT ++G+
Sbjct: 158 SDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWATKGANMNGEN 217
Query: 262 QYPKA---------SYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY-- 306
Q ++ + + +Q SDD P TTV+VGNL VT L F
Sbjct: 218 QSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEVTSVDLHHHFHALGV 277
Query: 307 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL-----------SWGRS 355
G + V++ K GFV+++ A A++M N L G+ I++ SWG
Sbjct: 278 GTIEDVRVQRDKGFGFVRYSTHGEAALAIQMGNTRFLFGKPIKMHITRKKAVSKCSWGSK 337
Query: 356 PS 357
P+
Sbjct: 338 PT 339
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ V++ +LQE F S+ GA + YGFV + D S
Sbjct: 41 DSSTCRSVYVGNIHPQVSEPLLQELF-----SSAGALEGCKLIRKEKSSYGFVDYFDRSS 95
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG + + GQ +Y Q +D + +FVG
Sbjct: 96 AAIAIVTLNG----------------RNIFGQSIKVNWAYTR---GQREDTSGHFHIFVG 136
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ G FV F ++ A+ A+ L G
Sbjct: 137 DLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKW 196
Query: 343 LGGQNIRLSWGRSPSN 358
LG + IR +W +N
Sbjct: 197 LGSRQIRCNWATKGAN 212
>gi|427778835|gb|JAA54869.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 236
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 116/208 (55%), Gaps = 28/208 (13%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
G TLW+GDL+ MDE ++ F+ GE V VK+IR++ TG GYGF++F AE
Sbjct: 3 GSASTLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAE 62
Query: 138 RVLQTFNGTPMPNGEQ--NFRLNWA--------------------SFGAGEK---RDDTP 172
R L NG P+PN Q FRLN A + G G + +
Sbjct: 63 RALLRCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSN 122
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ ++FVGDL+ADV D +L + F RYPS + AKVV+D TG +KG+GFVRF D +E A
Sbjct: 123 ELSMFVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDP-TGLSKGFGFVRFSDGTEYQEA 181
Query: 233 MTEM-NGVFCSTRPMRIGPATNKKTVSG 259
+ +M + + ++P+R+G A ++ +G
Sbjct: 182 LVDMQHSLLVGSKPIRVGVANPRRAAAG 209
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + +Y +Q+ F + K++ DRLTG +GYGF+ FGDE RA+
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 235 EMNGV----FCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVA-----QSDDDPNNTTV 285
NG + R+ A N G Q Q N ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 286 FVGNLDSIVTDEHLRELFSQ-YGQLVHVKI---PAG--KRCGFVQFADRSCAEEAL-RML 338
FVG+L + V D L + FSQ Y + K+ P G K GFV+F+D + +EAL M
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSDGTEYQEALVDMQ 186
Query: 339 NGTQLGGQNIRL 350
+ +G + IR+
Sbjct: 187 HSLLVGSKPIRV 198
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 167/346 (48%), Gaps = 36/346 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---- 177
Query: 262 QYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS +GQ++ +++
Sbjct: 178 --PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 235
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQPDPNQWN 369
K FV+F A A+ +NGT + G ++ WG+ +P +Q Q
Sbjct: 236 PDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQ------- 288
Query: 370 AGYYGYAQGYENYGYAAAAPQDPSMYY-GGY--PGYGNYQQPQQPQ 412
GY Q Y +G Q Y G+ P YG Y QP Q
Sbjct: 289 ---IGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQPWNQQ 331
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 27/190 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+D T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ MNG + + G++ K ++ + +Q D N+ VFVG
Sbjct: 59 AAAALAAMNG----------------RKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVG 100
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 101 DLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 160
Query: 343 LGGQNIRLSW 352
LGG+ IR +W
Sbjct: 161 LGGRQIRTNW 170
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 200 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|413920410|gb|AFW60342.1| nucleolysin TIAR [Zea mays]
Length = 447
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 145/290 (50%), Gaps = 23/290 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + +T L F G V K+IR +++ +GFI++ R A +
Sbjct: 75 RSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYAALAIL 130
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + Q ++NWA R+DT H IFVGDL +VTD L F Y +
Sbjct: 131 SLNGRQLYG--QPIKVNWAY--TSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSG-YST 185
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A+V+ D+ TGR++G+GFV F ++ + A+ ++NG + R +R AT +
Sbjct: 186 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGEE 245
Query: 261 QQY--PKASYQNSQVAQSDDDPNN---------TTVFVGNL--DSIVTDEHLRELFSQYG 307
+Q K N ++PN TTV+VGNL ++ + D HL G
Sbjct: 246 KQILDTKVDLSNGSSESGKENPNEDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSLGAG 305
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
+ V++ K GFV+++ A A++M NG +GG+ I+ SWG P+
Sbjct: 306 SIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKCSWGSKPT 355
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +LQE F++ P +G K++ +GF+ + D
Sbjct: 70 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGP-VEGCKLI----RKEKSSFGFIDYYDRRY 124
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG +P+++ A P+ +D + +FVG
Sbjct: 125 AALAILSLNGRQLYGQPIKVNWAYTST--------PR-----------EDTSGHFNIFVG 165
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ G FV F ++ A+ A+ LNG
Sbjct: 166 DLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKW 225
Query: 343 LGGQNIRLSWGRSPSN 358
LG + IR +W +N
Sbjct: 226 LGNRQIRCNWATKGAN 241
>gi|302496843|ref|XP_003010422.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
gi|291173965|gb|EFE29782.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
Length = 541
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 139/327 (42%), Gaps = 57/327 (17%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE------------------ 123
R L++G L + E L F TG V +VK+I +K Q
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQRLLLLYLSDLYLFFVLYVYL 161
Query: 124 -----------------GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGE 166
YGFIE+ AER +QT NG + E R+NWA
Sbjct: 162 NLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTA 219
Query: 167 KRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
++DT H IFVGDL+ +V D +L + F A S A+V+ D TGR++GYGFV F +
Sbjct: 220 SKEDTSSHFHIFVGDLSNEVNDEVLLQAFSA-CGSVSEARVMWDMKTGRSRGYGFVAFRE 278
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPATNK------------------KTVSGQQQYPKAS 267
++ +A++ M+G + +R +R A K T G +P
Sbjct: 279 RADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHG 338
Query: 268 YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD 327
Q+ + TT +VGNL T L LF +G +V + A + FV+
Sbjct: 339 VQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDT 398
Query: 328 RSCAEEALRMLNGTQLGGQNIRLSWGR 354
A A+ LNG + G+ ++ SWG+
Sbjct: 399 HENAAMAICQLNGYNVNGRPLKCSWGK 425
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 55/144 (38%), Gaps = 43/144 (29%)
Query: 250 PATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 309
P +SG P A+ V +S +PN ++VG LD VT++ L+++F G +
Sbjct: 71 PTAITSPMSGNMMSPTAA--GGYVRRSAPEPNKRALYVGGLDPRVTEDILKQIFETTGHV 128
Query: 310 VHVKI-----------------------------------------PAGKRCGFVQFADR 328
VKI G GF+++ D
Sbjct: 129 QSVKIIPDKNVSQRLLLLYLSDLYLFFVLYVYLNLITSALLLVIFQSKGLNYGFIEYDDP 188
Query: 329 SCAEEALRMLNGTQLGGQNIRLSW 352
AE A++ LNG ++ IR++W
Sbjct: 189 GAAERAMQTLNGRRVHQSEIRVNW 212
>gi|363750388|ref|XP_003645411.1| hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889045|gb|AET38594.1| Hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
Length = 586
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 117/234 (50%), Gaps = 53/234 (22%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DET + + G V VK+IR K+
Sbjct: 22 RTLWMGDLDPSFDETTIQQIWMTLGHQVQVKLIRAKKNLLIPCSTSSTLASSQHVEDERI 81
Query: 119 -----------TGQIE--GYGFIEFISRAGAERVLQTFNGTPMPN-------------GE 152
T Q+ GY F++F S A+ LQ N TP+PN +
Sbjct: 82 QINGVSFIDPNTTQLHHAGYCFVQFPSLQEAQAGLQ-LNSTPLPNLISSTTHNPTNPTAK 140
Query: 153 QNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR 210
+NFRLNWAS GA + D TP+ ++FVGDL+ T+ L F+ ++ S K +V+ D
Sbjct: 141 RNFRLNWAS-GATLQSDIPTTPEFSLFVGDLSPTATEAHLLSLFQTKFKSVKTVRVMTDP 199
Query: 211 LTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP 264
+TG ++ +GFVRF DE E+ RA+ EMNG++C R +R+ AT + + QQQ P
Sbjct: 200 ITGASRCFGFVRFADEQERRRALVEMNGIWCQGRQLRVAYATPRNNILQQQQIP 253
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 54/77 (70%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DP+NTTVF+G L++ +T+ L+ LF +G ++ VK+P GK CGFV+F R AE A++ +
Sbjct: 394 DPSNTTVFIGGLNNQITESQLQSLFMPFGNILSVKVPPGKGCGFVKFEHRLDAEAAIQGM 453
Query: 339 NGTQLGGQNIRLSWGRS 355
G +G IRLSWGR+
Sbjct: 454 QGFIVGNSAIRLSWGRT 470
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 217 GYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQS 276
GY FV+F E +A ++N + P I T+ T ++ + ++ + QS
Sbjct: 100 GYCFVQFPSLQEA-QAGLQLNS---TPLPNLISSTTHNPTNPTAKRNFRLNWASGATLQS 155
Query: 277 DDDPN-NTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVK-----IPAGKRC-GFVQFADR 328
D ++FVG+L T+ HL LF +++ + V+ I RC GFV+FAD
Sbjct: 156 DIPTTPEFSLFVGDLSPTATEAHLLSLFQTKFKSVKTVRVMTDPITGASRCFGFVRFADE 215
Query: 329 SCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
AL +NG G+ +R+++ +P N Q
Sbjct: 216 QERRRALVEMNGIWCQGRQLRVAYA-TPRNNILQ 248
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T++IG L + E+ L + F G +++VKV K G GF++F R AE +Q
Sbjct: 399 TVFIGGLNNQITESQLQSLFMPFGNILSVKVPPGK------GCGFVKFEHRLDAEAAIQG 452
Query: 143 FNGTPMPNGEQNFRLNW 159
G + G RL+W
Sbjct: 453 MQGFIV--GNSAIRLSW 467
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 152/332 (45%), Gaps = 18/332 (5%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F G V K+I + G E Y F+EF A L N
Sbjct: 1 YVGNLDPSVTEELIMVLFGQIGTVKGCKIIH--EPGH-EPYCFVEFAEHHSAAAALAAMN 57
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKG 203
E ++NWA+ + DT H IFVGDL+ ++ + L++ F A +
Sbjct: 58 KRNCMGRE--MKVNWATSPGNAPKQDTSKHFHIFVGDLSPEIETHTLRDAFAA-FGEISD 114
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQY 263
+VV D T ++KGYGFV F +S+ A+ MNG + TR +R AT K
Sbjct: 115 CRVVRDPQTLKSKGYGFVSFVKKSDAENAIAGMNGQWLGTRAIRTNWATRKPPAPKDAGS 174
Query: 264 PKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFV 323
SY+ QS N TV+ GNL T+E L+++F YGQ+ +++ K F+
Sbjct: 175 KPMSYEEV-FGQSSS--TNCTVYCGNLAQGSTEEALQKIFGPYGQIQEIRVFKDKGYAFI 231
Query: 324 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGY--------YGY 375
+FA + A +A+ ++ T L GQN++ SWG+ P + + G YGY
Sbjct: 232 RFASKESATQAIVSVHNTDLNGQNVKCSWGKEPGEPGSANNAQLMTGGLGPTNTQYPYGY 291
Query: 376 AQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQ 407
QG + PQ S + G GY Y Q
Sbjct: 292 NQGMSYWYPGGYPPQMQSQFVQGMQGYAAYGQ 323
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 33/200 (16%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL ++ L FA GE+ +V+R+ QT + +GYGF+ F+ ++ AE +
Sbjct: 88 IFVGDLSPEIETHTLRDAFAAFGEISDCRVVRDPQTLKSKGYGFVSFVKKSDAENAIAGM 147
Query: 144 NGTPMPNGEQNFRLNWASF------GAGEK---------RDDTPDHTIFVGDLAADVTDY 188
NG + G + R NWA+ AG K + + + T++ G+LA T+
Sbjct: 148 NGQWL--GTRAIRTNWATRKPPAPKDAGSKPMSYEEVFGQSSSTNCTVYCGNLAQGSTEE 205
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM-----TEMNG--VFC 241
LQ+ F Y + +V D KGY F+RF + +A+ T++NG V C
Sbjct: 206 ALQKIF-GPYGQIQEIRVFKD------KGYAFIRFASKESATQAIVSVHNTDLNGQNVKC 258
Query: 242 S--TRPMRIGPATNKKTVSG 259
S P G A N + ++G
Sbjct: 259 SWGKEPGEPGSANNAQLMTG 278
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 154/315 (48%), Gaps = 13/315 (4%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKS 115
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT
Sbjct: 116 AF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 174
Query: 253 NKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 312
K Q + + P N TV+ G + S +TD+ +R+ FS +GQ++ +
Sbjct: 175 RKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEI 234
Query: 313 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWN 369
++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +QW
Sbjct: 235 RVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWG 294
Query: 370 --AGYYGYAQGYENY 382
+ YG Q Y Y
Sbjct: 295 QWSQVYGNPQQYGQY 309
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 84 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 144 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSS 201
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 202 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 254
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 255 HAIVSVNGT 263
>gi|392568189|gb|EIW61363.1| hypothetical protein TRAVEDRAFT_26986 [Trametes versicolor
FP-101664 SS1]
Length = 950
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 145/298 (48%), Gaps = 54/298 (18%)
Query: 9 VPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQP--QAQPPAMWATQAAAPQAA 66
V P PP+ + + + +PP+ P SP + PP P +++ + Q P
Sbjct: 150 VQPSAPPLVLNHHH--RPSPPRGLPDIYTSPLLASSPPFPDRESRDAFLNQRQQHQPTPL 207
Query: 67 GVAVPPQQ-------QGQPGEIRTLWIGDLQYWMDETYLN-TCFAHTGEVVAVKVIR--- 115
V +PP Q P TLW G+L+ WMDE Y C + V +KV R
Sbjct: 208 SVQLPPAQPQSLSSPNSAPSARTTLWWGELEPWMDEEYAKQVCTLMGWDPVGIKVPRPAP 267
Query: 116 NKQTGQIE---GYGFIEFISRAGAERVLQTFNGTP----MPNGEQNFRLNWASFGA---- 164
+ TGQ GY F+ F +++ A VLQ N + MPN + F LNWAS
Sbjct: 268 DAITGQQANNPGYCFLTFPTQSHAASVLQQVNTSNAPLIMPNSAKQFSLNWASSVPSAPL 327
Query: 165 ------------GEKRDDTP-DHTIFVGDLAADVTDYMLQETFRA--------RYP---- 199
G + P +++IFVGDLA +V++ L FR R P
Sbjct: 328 PAAMPGQTISIPGVQNPQYPKEYSIFVGDLAPEVSNSDLVAVFRNPVLGLRNDREPRFIR 387
Query: 200 ---STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
S K AK+++D +TG ++GYGFVRF DES+Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 388 PFLSCKSAKIMLDPVTGVSRGYGFVRFTDESDQQRALIEMHGLYCLSRPMRISPATAK 445
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 54/80 (67%)
Query: 276 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEAL 335
+ DP NTTVFVG L ++ ++ LR F+ +G++ +VK+P GK CGFVQF + AE A+
Sbjct: 613 TSSDPYNTTVFVGGLSPLINEDTLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 672
Query: 336 RMLNGTQLGGQNIRLSWGRS 355
+ G +GG IRLSWGRS
Sbjct: 673 EKMQGFPIGGSRIRLSWGRS 692
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L ++E L T FA GE+ VKV K GF++F+ + AER ++
Sbjct: 621 TVFVGGLSPLINEDTLRTFFAPFGEIHYVKVPVGKHC------GFVQFVRKPDAERAIEK 674
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 675 MQGFPI--GGSRIRLSW 689
>gi|302654241|ref|XP_003018929.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
gi|291182617|gb|EFE38284.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
Length = 543
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 139/329 (42%), Gaps = 59/329 (17%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE------------------ 123
R L++G L + E L F TG V +VK+I +K Q
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQHLLLLYLSDLYLFFTYVLYV 161
Query: 124 -------------------GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA 164
YGFIE+ AER +QT NG + E R+NWA
Sbjct: 162 YLYLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSN 219
Query: 165 GEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRF 223
++DT H IFVGDL+ +V D +L + F A S A+V+ D TGR++GYGFV F
Sbjct: 220 TASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSA-CGSVSEARVMWDMKTGRSRGYGFVAF 278
Query: 224 GDESEQLRAMTEMNGVFCSTRPMRIGPATNK------------------KTVSGQQQYPK 265
+ ++ +A++ M+G + +R +R A K T G +P
Sbjct: 279 RERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPT 338
Query: 266 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 325
Q+ + TT +VGNL T L LF +G +V + A + FV+
Sbjct: 339 HGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKM 398
Query: 326 ADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
A A+ LNG + G+ ++ SWG+
Sbjct: 399 DTHENAAMAICQLNGYNVNGRPLKCSWGK 427
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 45/146 (30%)
Query: 250 PATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 309
P +SG P A+ V +S +PN ++VG LD VT++ L+++F G +
Sbjct: 71 PTAITSPMSGNMMSPTAA--GGYVRRSAPEPNKRALYVGGLDPRVTEDILKQIFETTGHV 128
Query: 310 VHVKI-------------------------------------------PAGKRCGFVQFA 326
VKI G GF+++
Sbjct: 129 QSVKIIPDKNVSQHLLLLYLSDLYLFFTYVLYVYLYLITSALLLVIFQSKGLNYGFIEYD 188
Query: 327 DRSCAEEALRMLNGTQLGGQNIRLSW 352
D AE A++ LNG ++ IR++W
Sbjct: 189 DPGAAERAMQTLNGRRVHQSEIRVNW 214
>gi|168027694|ref|XP_001766364.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682273|gb|EDQ68692.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 150/297 (50%), Gaps = 27/297 (9%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
R++++G++ + E L FA G + K+IR ++ YGF+++ A
Sbjct: 19 SCRSVYVGNIHSRVTEGLLAEVFASLGPLEGCKLIRKDKSS----YGFVDYFDHRSAVAA 74
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
L T NG M Q+ ++NWA + +G++ D T H +FVGDL+A+VTD L F Y
Sbjct: 75 LSTLNGRQMFG--QSIKVNWA-YASGQREDTTAGHFNVFVGDLSAEVTDATLFAAF-CIY 130
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT------ 252
PS A+V+ D+ +GR++G+GFV F + E +++EM G + TRP+R A
Sbjct: 131 PSCSDARVMWDQRSGRSRGFGFVSFRSQQEAESSISEMTGKWLGTRPIRCNWAAKTNNTI 190
Query: 253 ----NKKTVSGQQQYPKASY--QNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLREL 302
+K T G A ++ Q + + D P TTV+VGNL +T L
Sbjct: 191 QADESKLTTRGLTLCCLADVRSEDRQDSSAGDGPEINSQYTTVYVGNLSQQITQAELHRQ 250
Query: 303 FSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
F G V V++ K GFV++ + A A++ NG + G++++ SWG P+
Sbjct: 251 FHSLGAGVIEDVRVQKEKGFGFVRYRTHAEAAFAIQAANGRVIWGKSLKCSWGSKPT 307
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 30/205 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D T +++VG++ + VT+ +L E F + P +G K++ YGFV + D
Sbjct: 16 DATSCRSVYVGNIHSRVTEGLLAEVFASLGP-LEGCKLIRK----DKSSYGFVDYFDHRS 70
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
+ A++ +NG + +++ N SGQ++ A + N VFVG
Sbjct: 71 AVAALSTLNGRQMFGQSIKV----NWAYASGQREDTTAGHFN--------------VFVG 112
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQ 342
+L + VTD L F Y ++ +R GFV F + AE ++ + G
Sbjct: 113 DLSAEVTDATLFAAFCIYPSCSDARVMWDQRSGRSRGFGFVSFRSQQEAESSISEMTGKW 172
Query: 343 LGGQNIRLSWGRSPSNKQAQPDPNQ 367
LG + IR +W + +N Q D ++
Sbjct: 173 LGTRPIRCNWA-AKTNNTIQADESK 196
>gi|449453379|ref|XP_004144435.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 155/318 (48%), Gaps = 36/318 (11%)
Query: 67 GVAVPPQQQGQPG----------EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
G+ PPQ + P R++++G++ + E L F G V K++R
Sbjct: 28 GLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRK 87
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-T 175
+++ YGF+ + R A + + NG + Q ++NWA A +R+DT H
Sbjct: 88 EKSS----YGFVHYFDRRSAALAILSLNGRHLFG--QPIKVNWAY--ASSQREDTSGHFN 139
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
IFVGDL+ +VTD ML F A Y S A+V+ D+ TGR++G+GFV F ++ E A+ +
Sbjct: 140 IFVGDLSPEVTDAMLFACFSA-YSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAIND 198
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQ---------YPKASYQNSQVAQSDDDPNN---- 282
+ G + +R +R A V+ +Q S ++ + + ++D P N
Sbjct: 199 LTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQY 258
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG 340
TTV+VGNL V+ L F G V V+I K GFV++ + A A++M N
Sbjct: 259 TTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNT 318
Query: 341 TQ-LGGQNIRLSWGRSPS 357
L G+ I+ SWG P+
Sbjct: 319 RSFLCGRQIKCSWGSKPT 336
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 158/317 (49%), Gaps = 17/317 (5%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKS 115
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT
Sbjct: 116 AF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 174
Query: 253 NK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
K S Q+ K V QS P N TV+ G + S +TD+ +R+ FS +GQ++
Sbjct: 175 RKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQTFSPFGQIM 232
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQ 367
+++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +Q
Sbjct: 233 EIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQ 292
Query: 368 WN--AGYYGYAQGYENY 382
W + YG Q Y Y
Sbjct: 293 WGQWSQVYGNPQQYGQY 309
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 84 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 144 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 201
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 202 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 254
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 255 HAIVSVNGT 263
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 145/310 (46%), Gaps = 22/310 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E L F+ G V K+IR + Y F+EF + A L
Sbjct: 8 RTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGN---DPYAFVEFTNHQCAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N N E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSFLNKE--MKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
++V D T ++KGY FV F +SE A+ MNG + +R +R +T K
Sbjct: 122 ISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 261 QQ--YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
++ + S N + + P N TV+ G + +TDE + + FS +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDELINKTFSPFGTIQDIRVFKDK 241
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS---------PSNKQAQPDPNQWN 369
F++F + A A+ + T++ G ++ WG+ +N QAQ Q
Sbjct: 242 GYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQ----QVT 297
Query: 370 AGYYGYAQGY 379
AG YA GY
Sbjct: 298 AGAGQYAYGY 307
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEE 333
++ N T++VGNLDS V++E L LFSQ G + KI P FV+F + CA
Sbjct: 2 SEESNPRTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAAT 61
Query: 334 ALRMLNGTQLGGQNIRLSWGRSPSNK 359
AL +N + ++++W SP N+
Sbjct: 62 ALAAMNKRSFLNKEMKVNWATSPGNQ 87
>gi|308475439|ref|XP_003099938.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
gi|308266205|gb|EFP10158.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
Length = 408
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 142/295 (48%), Gaps = 31/295 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + + +L T F G V K+I + G + + F+EF A + LQ
Sbjct: 38 RTLFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQASQALQ 97
Query: 142 TFNGTPMPNGEQNFRLNWASF----GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ NG + E+ R+NWA G K + + +FVGDL+A++ L+E F
Sbjct: 98 SMNGRQLL--EREMRVNWAVEPNQPGDRNKPETSRHFHVFVGDLSAEIDSTKLREAFLP- 154
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--- 254
+ AK++ D T + KGYGFV + + RA+ +MNG + R +R AT K
Sbjct: 155 FGEVSEAKIIRDNATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWATRKPEE 214
Query: 255 -----------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 297
G+ + + +Y + D NT+V+VGN++S+ DE
Sbjct: 215 EGGERRERDRNERGDRPHRGEGRHHHFEKTYDEVFREAAAD---NTSVYVGNINSLTEDE 271
Query: 298 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352
+R F ++GQ+V V+I + FV+F + A A+ +N + GQ +R SW
Sbjct: 272 -IRRGFERFGQIVEVRIFKSQGYAFVKFEQKESAARAIVQMNNQDVSGQMVRCSW 325
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 50/219 (22%)
Query: 69 AVPPQQQGQPGEIRT-----LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE 123
AV P Q G + T +++GDL +D T L F GEV K+IR+ T + +
Sbjct: 114 AVEPNQPGDRNKPETSRHFHVFVGDLSAEIDSTKLREAFLPFGEVSEAKIIRDNATNKAK 173
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS---------------------- 161
GYGF+ + R AER ++ NG + G + R NWA+
Sbjct: 174 GYGFVSYPRREDAERAIEQMNGQWL--GRRTIRTNWATRKPEEEGGERRERDRNERGDRP 231
Query: 162 -FGAGEK-----------RDDTPDHT-IFVGDLAADVTDYMLQETFRARYPSTKGAKVVI 208
G G R+ D+T ++VG++ + D + R + ++V
Sbjct: 232 HRGEGRHHHFEKTYDEVFREAAADNTSVYVGNINSLTEDEI-------RRGFERFGQIVE 284
Query: 209 DRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
R+ +++GY FV+F + RA+ +MN S + +R
Sbjct: 285 VRIF-KSQGYAFVKFEQKESAARAIVQMNNQDVSGQMVR 322
>gi|449447926|ref|XP_004141717.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449480481|ref|XP_004155906.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 148/297 (49%), Gaps = 26/297 (8%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L F TG V + K++R +++ YGFI + R A
Sbjct: 50 PSTCRSVYVGNVHTQVTEPLLQEVFGSTGLVESCKLVRKEKSS----YGFIHYFDRRSAA 105
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + IFVGDL+ +VTD L F
Sbjct: 106 MAILSLNGRHLFG--QPIKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSV- 161
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN---- 253
+ S A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT
Sbjct: 162 FSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGS 221
Query: 254 -----KKTVSGQQQYPKASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFS 304
V + S ++ + S D P N TTV+VGNL T L F
Sbjct: 222 NDDKQSSDVKSIAELTNGSSEDGKETVSSDAPENNPQYTTVYVGNLAPEATQVDLHRHFH 281
Query: 305 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ--LGGQNIRLSWGRSPS 357
G V V+I K GFV+++ + A A++M N TQ L G+ I+ SWG P+
Sbjct: 282 SLGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGN-TQSFLCGKQIKCSWGSKPT 337
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 279 DPNNT-TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 335
DP+ +V+VGN+ + VT+ L+E+F G + K+ ++ GF+ + DR A A+
Sbjct: 49 DPSTCRSVYVGNVHTQVTEPLLQEVFGSTGLVESCKLVRKEKSSYGFIHYFDRRSAAMAI 108
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQ 360
LNG L GQ I+++W + ++
Sbjct: 109 LSLNGRHLFGQPIKVNWAYASGQRE 133
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 146/283 (51%), Gaps = 17/283 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F G + K+I + T + Y F+EF A L
Sbjct: 8 KTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVD--TAGNDPYCFVEFFEHRHAAASLA 65
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 66 AMNGRKIMGKE--VKVNWATSPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAF-APFGRI 122
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K
Sbjct: 123 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---- 178
Query: 262 QYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
PKA+Y+ + S D+ P+N TV+ G + + +T++ +R+ FS +GQ++ V++
Sbjct: 179 --PKATYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEVRVF 236
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
K FV+F A A+ +NGT L G ++ WG+ ++
Sbjct: 237 PDKGYSFVRFNSHESAAHAIVSVNGTSLEGHIVKCYWGKETTD 279
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
DD T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 3 DDEQPKTLYVGNLSRDVTEALIMQLFGQIGPC-KSCKMIVD--TAGNDPYCFVEFFEHRH 59
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
++ MNG + + G++ K ++ S +Q D N+ VFVG
Sbjct: 60 AAASLAAMNG----------------RKIMGKE--VKVNWATSPSSQKKDTSNHFHVFVG 101
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L +T + +R F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 102 DLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 161
Query: 343 LGGQNIRLSWG-RSPSNKQAQPDPN 366
LGG+ IR +W R P +A + N
Sbjct: 162 LGGRQIRTNWATRKPPAPKATYETN 186
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+ F
Sbjct: 85 PSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSF 144
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDDTP 172
++ AE +Q G + G + R NWA SF +
Sbjct: 145 FNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKATYETNTKHLSFDEVVNQSSPS 202
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G + +T+ ++++TF + + +V D KGY FVRF A
Sbjct: 203 NCTVYCGGVTTGLTEQLMRQTF-SPFGQIMEVRVFPD------KGYSFVRFNSHESAAHA 255
Query: 233 MTEMNG 238
+ +NG
Sbjct: 256 IVSVNG 261
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 158/317 (49%), Gaps = 17/317 (5%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKS 115
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT
Sbjct: 116 AF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 174
Query: 253 NK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
K S Q+ K V QS P N TV+ G + S +TD+ +R+ FS +GQ++
Sbjct: 175 RKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQTFSPFGQIM 232
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQ 367
+++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +Q
Sbjct: 233 EIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQ 292
Query: 368 WN--AGYYGYAQGYENY 382
W + YG Q Y Y
Sbjct: 293 WGQWSQVYGNPQQYGQY 309
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 84 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 144 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 201
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 202 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 254
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 255 HAIVSVNGT 263
>gi|56755515|gb|AAW25936.1| SJCHGC05387 protein [Schistosoma japonicum]
Length = 348
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 110/180 (61%), Gaps = 14/180 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
T+W+GDL+ +MDE ++ F +GE +V+VKVIRNK TGQ GYGFIEF + A +
Sbjct: 6 HTIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAM 65
Query: 141 QTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRAR 197
NG +P + F+LN AS+G +D T + ++FVG+L DV D L F+ +
Sbjct: 66 LKLNGKLIPGAPTRRFKLNHASYG----KDSTSSNECSLFVGELTEDVDDLALFNAFK-K 120
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST--RPMRIGPATNKK 255
YP+ + AKVV+ G+++GYGFVRF ES+ +A+ EM +C +P+R+ A K+
Sbjct: 121 YPTCRSAKVVM--TNGKSRGYGFVRFLTESDMDKALIEMQN-YCGLGYKPIRVSLAIPKR 177
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
HTI++GDL + + ++ F + KV+ ++ TG+T GYGF+ F + + AM
Sbjct: 6 HTIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAM 65
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSI 293
++NG P R + + ASY + N ++FVG L
Sbjct: 66 LKLNGKLIPGAPTR------------RFKLNHASYGKDSTSS-----NECSLFVGELTED 108
Query: 294 VTDEHLRELFSQY--GQLVHVKIPAGKR--CGFVQFADRSCAEEAL-RMLNGTQLGGQNI 348
V D L F +Y + V + GK GFV+F S ++AL M N LG + I
Sbjct: 109 VDDLALFNAFKKYPTCRSAKVVMTNGKSRGYGFVRFLTESDMDKALIEMQNYCGLGYKPI 168
Query: 349 RLSW 352
R+S
Sbjct: 169 RVSL 172
>gi|147797981|emb|CAN65009.1| hypothetical protein VITISV_027348 [Vitis vinifera]
Length = 420
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 158/317 (49%), Gaps = 34/317 (10%)
Query: 67 GVAVPPQQQGQPG----------EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
G+ PPQ + P R++++G++ + E L FA TG V K++R
Sbjct: 28 GLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRK 87
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTI 176
+++ YGFI + R A + + NG + Q ++NWA + +G++ D + I
Sbjct: 88 EKSS----YGFIHYFDRRSAALAILSLNGRHLFG--QPIKVNWA-YASGQREDTSGHFNI 140
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
FVGDL+ +VTD L F +PS A+V+ D+ TGR++G+GFV F ++ A+ ++
Sbjct: 141 FVGDLSPEVTDATLFACFSV-FPSCSDARVMWDQKTGRSRGFGFVSFRNQQVAQSAINDI 199
Query: 237 NGVFCSTRPMRIGPATNKKTVSGQQQYPKA---------SYQNSQVAQSDDDPNN----T 283
G + +R +R AT + +Q A S ++ + +++ P+N T
Sbjct: 200 TGKWLGSRQIRCNWATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYT 259
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG- 340
TV+VGNL VT L F +G V V++ K GFV++ + A A++M N
Sbjct: 260 TVYVGNLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNTQ 319
Query: 341 TQLGGQNIRLSWGRSPS 357
+ L G+ I+ SWG P+
Sbjct: 320 SILCGKPIKCSWGSKPT 336
>gi|256082950|ref|XP_002577714.1| tRNA selenocysteine associated protein (secp43) [Schistosoma
mansoni]
gi|360043607|emb|CCD81153.1| putative trna selenocysteine associated protein (secp43)
[Schistosoma mansoni]
Length = 348
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 110/180 (61%), Gaps = 14/180 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
T+W+GDL+ +MDE ++ F +GE +V+VKVIRNK TGQ GYGFIEF + A +
Sbjct: 6 HTIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAM 65
Query: 141 QTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRAR 197
NG +P + F+LN AS+G +D T + ++FVG+L DV D L F+ +
Sbjct: 66 LKLNGKLIPGAPTRRFKLNHASYG----KDSTSSNECSLFVGELTEDVDDLALFNAFK-K 120
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST--RPMRIGPATNKK 255
YP+ + AKVV+ G+++GYGFVRF ES+ +A+ EM +C +P+R+ A K+
Sbjct: 121 YPTCRSAKVVM--TNGKSRGYGFVRFLTESDMDKALIEMQN-YCGLGYKPIRVSLAIPKR 177
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
HTI++GDL + + ++ F + KV+ ++ TG+T GYGF+ F + + AM
Sbjct: 6 HTIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAM 65
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSI 293
++NG P R + + ASY + N ++FVG L
Sbjct: 66 LKLNGKLIPGAPTR------------RFKLNHASYGKDSTSS-----NECSLFVGELTED 108
Query: 294 VTDEHLRELFSQY--GQLVHVKIPAGKR--CGFVQFADRSCAEEAL-RMLNGTQLGGQNI 348
V D L F +Y + V + GK GFV+F S ++AL M N LG + I
Sbjct: 109 VDDLALFNAFKKYPTCRSAKVVMTNGKSRGYGFVRFLTESDMDKALIEMQNYCGLGYKPI 168
Query: 349 RLSW 352
R+S
Sbjct: 169 RVSL 172
>gi|226290334|gb|EEH45818.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Paracoccidioides brasiliensis Pb18]
Length = 508
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 135/285 (47%), Gaps = 35/285 (12%)
Query: 102 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG-------------TPM 148
F TG V +VK+I +K + + YGF+E+ AER + T NG P
Sbjct: 104 FETTGHVQSVKIIPDKNSKGLN-YGFVEYDDPGAAERAMATLNGRRVHQSNYDIRSLKPH 162
Query: 149 PNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVV 207
P +Q R+NWA ++DT +H IFVGDL+ +V D +L + F A + S A+V+
Sbjct: 163 P-LQQEIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVM 220
Query: 208 IDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------------- 254
D TGR++GYGFV F + S+ +A++ M+G + +R +R A K
Sbjct: 221 WDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAA 280
Query: 255 -----KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 309
T G +P Q+ + + TT +VGNL T L LF +G +
Sbjct: 281 MGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYV 340
Query: 310 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
V + A + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 341 VETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGK 385
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 149/306 (48%), Gaps = 10/306 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G+L + E + F+ G + K+I + + Y F+EF A L
Sbjct: 138 RLLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 195
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 196 AMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAF-APFGKI 252
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K
Sbjct: 253 SDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKST 312
Query: 262 QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 321
Q + + P N TV+ G + S +TD+ +R+ FS +GQ++ +++ K
Sbjct: 313 QENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYS 372
Query: 322 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWN--AGYYGYA 376
FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +QW + YG
Sbjct: 373 FVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNP 432
Query: 377 QGYENY 382
Q Y Y
Sbjct: 433 QQYGQY 438
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 214 TPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVS 273
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDDT 171
F ++ AE + G + G + R NWA+ F +
Sbjct: 274 FYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSP 331
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
+ T++ G +A+ +TD ++++TF S G + I KGY FVRF
Sbjct: 332 KNCTVYCGGIASGLTDQLMRQTF-----SPFGQIMEIRVFP--EKGYSFVRFSTHESAAH 384
Query: 232 AMTEMNGV 239
A+ +NG
Sbjct: 385 AIVSVNGT 392
>gi|449550716|gb|EMD41680.1| hypothetical protein CERSUDRAFT_110250 [Ceriporiopsis subvermispora
B]
Length = 448
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 74
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + +FVGDL+ +V D +L + F A + +
Sbjct: 75 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSNHFHVFVGDLSPEVNDEVLAKAFSA-FGTL 131
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT----- 256
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT
Sbjct: 132 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQGAPP 190
Query: 257 -----------------VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 299
+ V Q NTTV+VGNL T L
Sbjct: 191 VGVRSGSMSAGSGGGGGAPAPMNFSGGPLSYESVVQ-QTPAYNTTVYVGNLVPYCTQADL 249
Query: 300 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF G L +++ A + FV+ A A+ L G + G+ I+ SWG+
Sbjct: 250 IPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGK 304
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 30/197 (15%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR-LTGRTKGYGFVRFGDESEQLRAMT 234
++VG+L+ VT+YML E F P + K++ DR YGFV + D A+
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGP-VQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 74
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
+NG +R+ A YQ Q +D N+ VFVG+L V
Sbjct: 75 TLNGRKIFDTEIRVNWA----------------YQGQQ--NKEDTSNHFHVFVGDLSPEV 116
Query: 295 TDEHLRELFSQYGQLVHVKI----PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNI 348
DE L + FS +G L ++ +GK GF+ F D++ AE+A+ +NG LG + I
Sbjct: 117 NDEVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAI 176
Query: 349 RLSWGRSPSNKQAQPDP 365
R++W +N++ Q P
Sbjct: 177 RVNW----ANQKTQGAP 189
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSC 330
+ P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D
Sbjct: 9 EAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRA 68
Query: 331 AEEALRMLNGTQLGGQNIRLSW 352
AE AL+ LNG ++ IR++W
Sbjct: 69 AETALQTLNGRKIFDTEIRVNW 90
>gi|158255914|dbj|BAF83928.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 158/317 (49%), Gaps = 17/317 (5%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKS 115
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT
Sbjct: 116 AF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDGENAIVHMGGQWLGGRQIRTNWAT 174
Query: 253 NK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
K S Q+ K V QS P N TV+ G + S +TD+ +R+ FS +GQ++
Sbjct: 175 RKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQTFSPFGQIM 232
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQ 367
+++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +Q
Sbjct: 233 EIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQ 292
Query: 368 WN--AGYYGYAQGYENY 382
W + YG Q Y Y
Sbjct: 293 WGQWSQVYGNPQQYGQY 309
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 84 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ E + G + G + R NWA+ F +
Sbjct: 144 SFYNKLDGENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 201
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 202 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 254
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 255 HAIVSVNGT 263
>gi|449517663|ref|XP_004165864.1| PREDICTED: nucleolysin TIAR-like, partial [Cucumis sativus]
Length = 394
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 148/293 (50%), Gaps = 26/293 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + E L F G V K++R +++ YGF+ + R A +
Sbjct: 25 RSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSS----YGFVHYFDRRSAALAIL 80
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + Q ++NWA A +R+DT H IFVGDL+ +VTD ML F A Y S
Sbjct: 81 SLNGRHLFG--QPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSA-YSS 135
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A+V+ D+ TGR++G+GFV F ++ E A+ ++ G + +R +R A V+
Sbjct: 136 CSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNED 195
Query: 261 QQ---------YPKASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQYG 307
+Q S ++ + + ++D P N TTV+VGNL V+ L F G
Sbjct: 196 KQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLG 255
Query: 308 QLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ-LGGQNIRLSWGRSPS 357
V V+I K GFV++ + A A++M N L G+ I+ SWG P+
Sbjct: 256 AGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPT 308
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 30/190 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +LQE F + P +G K+V YGFV + D
Sbjct: 20 DASTCRSVYVGNIHIQVTEPLLQEVFGSIGP-VEGCKLV----RKEKSSYGFVHYFDRRS 74
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG +P+++ A Y +S Q +D + +FVG
Sbjct: 75 AALAILSLNGRHLFGQPIKVNWA----------------YASS---QREDTSGHFNIFVG 115
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ GFV F ++ A+ A+ L G
Sbjct: 116 DLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKW 175
Query: 343 LGGQNIRLSW 352
LG + IR +W
Sbjct: 176 LGSRQIRCNW 185
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 146/310 (47%), Gaps = 22/310 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E L F+ G V K+IR + Y F+EF + A L
Sbjct: 8 RTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGN---DPYAFVEFTNHQCAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSFLDKE--MKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
++V D T ++KGY FV F +SE A+ MNG + +R +R +T K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 261 QQ--YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
++ + S N + + P N TV+ G + +TDE +++ FS +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDK 241
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS---------PSNKQAQPDPNQWN 369
F++F + A A+ + T++ G ++ WG+ +N QAQ Q
Sbjct: 242 GYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQ----QVT 297
Query: 370 AGYYGYAQGY 379
AG YA GY
Sbjct: 298 AGAGQYAYGY 307
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEE 333
++ N T++VGNLD+ V+++ L LFSQ G + KI P FV+F + CA
Sbjct: 2 SEESNPRTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAAT 61
Query: 334 ALRMLNGTQLGGQNIRLSWGRSPSNK 359
AL +N + ++++W SP N+
Sbjct: 62 ALAAMNKRSFLDKEMKVNWATSPGNQ 87
>gi|148909819|gb|ABR17996.1| unknown [Picea sitchensis]
Length = 490
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 152/315 (48%), Gaps = 48/315 (15%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L F G + K+I+ +++ YGF+++ A +
Sbjct: 78 CRSVYVGNISVHVTEGLLAEVFGAVGPLEGCKLIKKEKSS----YGFVDYYDHRSAANSI 133
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG + Q ++NWA + +G++ D T ++IFVGDL+ +VTD L F + YPS
Sbjct: 134 LHLNGKQIYG--QAIKVNWA-YASGQREDTTGHYSIFVGDLSPEVTDAALFACF-SIYPS 189
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A+V+ D+ +GR++G+GFV F ++ + A+ +M G +RP+R AT K+ SG
Sbjct: 190 CSDARVMWDQKSGRSRGFGFVSFRNQQDADNAINQMTGKTLGSRPIRCNWAT--KSSSGN 247
Query: 261 Q---------QYPKASYQNSQVAQSDD---------------------------DPNNTT 284
Q Q+ + N+ S D +P+ TT
Sbjct: 248 QSDDKQTSEMQFASNASNNTSANGSADHNISAGTTAVGTGGQQKGGAQTSGPENNPSYTT 307
Query: 285 VFVGNLDSIVTDEHLRELFSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ 342
V++GNL VT L F G V V++ K GFV++ A A+++ NG
Sbjct: 308 VYIGNLPHEVTQTELHRQFLALGVGVIEDVRVQRDKGFGFVRYRSHEEAALAIQLANGRV 367
Query: 343 LGGQNIRLSWGRSPS 357
+ G++I+ SWG P+
Sbjct: 368 ICGKSIKCSWGSKPT 382
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 159/335 (47%), Gaps = 34/335 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F G + K+I + T + Y F+EF A L
Sbjct: 8 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVD--TAGNDPYCFVEFYDHRHAAASLA 65
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ +K+D + +FVGDL+ ++T ++ F +
Sbjct: 66 AMNGRKIMGKE--VKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAF-GPFGRI 122
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K
Sbjct: 123 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPA---- 178
Query: 262 QYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
PK +++N+ S D+ P+N TV+ G + + +T++ +R+ FS +GQ++ V++
Sbjct: 179 --PKTTHENNSKHLSFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVF 236
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP----SNKQAQPDPNQWNAG 371
K FV+F A A+ +NG+ + G ++ WG+ ++ Q P P Q
Sbjct: 237 PDKGYSFVRFNSHESAAHAIVSVNGSSIEGHIVKCYWGKETPDMMNSMQQMPVPQQ---- 292
Query: 372 YYGYAQGYENYGYAAAAPQDP-SMYYGGYPGYGNY 405
G+AAA P +YG P G Y
Sbjct: 293 --------NKMGFAAAQPYGQWGQWYGNGPQIGQY 319
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
DD P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F D
Sbjct: 3 EDDQP-RTLYVGNLSRDVTEPLILQVFTQIGP-CKSCKMIVD--TAGNDPYCFVEFYDHR 58
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
++ MNG + + G++ K ++ + +Q D N+ VFV
Sbjct: 59 HAAASLAAMNG----------------RKIMGKE--VKVNWATTPTSQKKDTSNHFHVFV 100
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 101 GDLSPEITTEDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQ 160
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 161 WLGGRQIRTNW 171
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 27/187 (14%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P Q+ +++GDL + + F G + +V+++ TG+ +GYGF+
Sbjct: 84 TPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFGRISDARVVKDMATGKSKGYGFVS 143
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDDT 171
F ++ AE +Q G + G + R NWA SF +
Sbjct: 144 FFNKWDAENAIQHMGGQWL--GGRQIRTNWATRKPPAPKTTHENNSKHLSFDEVVNQSSP 201
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
+ T++ G ++ +T+ ++++TF + + +V D KGY FVRF
Sbjct: 202 SNCTVYCGGVSTGLTEQLMRQTF-SPFGQIMEVRVFPD------KGYSFVRFNSHESAAH 254
Query: 232 AMTEMNG 238
A+ +NG
Sbjct: 255 AIVSVNG 261
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCA 331
DD P T++VGNL VT+ + ++F+Q G K+ AG C FV+F D A
Sbjct: 4 DDQPR--TLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYC-FVEFYDHRHA 60
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
+L +NG ++ G+ ++++W +P++++
Sbjct: 61 AASLAAMNGRKIMGKEVKVNWATTPTSQK 89
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 148/298 (49%), Gaps = 11/298 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F G + K+I + + Y F+EF A L
Sbjct: 8 KTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 65
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAF-APFGKI 122
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--KTVSG 259
A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K +
Sbjct: 123 SDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKNT 182
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
Q PK V QS P N TV+ G + S ++D +R+ FS +GQ++ +++ K
Sbjct: 183 QDASPKQLRYEDVVNQS--SPQNCTVYCGGIQSGLSDHLMRQTFSPFGQIMEIRVFPEKG 240
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN--KQAQPDPNQWNAGYYGY 375
F++F+ A A+ +NGT + G ++ WG+ + K QP Q + G +G+
Sbjct: 241 YSFIRFSSHESAAHAIVSVNGTTIEGHIVKCYWGKESPDMAKTVQPVTEQVDYGQWGH 298
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 42/241 (17%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D++ T++VG+L+ DVT+ ++ + F P K K++ + + Y FV F +
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQIGPC-KSCKMITEHTSNDP--YCFVEFYEHR 58
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
+ A+ MNG + + G++ K ++ + +Q D N+ VFV
Sbjct: 59 DAAAALAAMNG----------------RKILGKE--VKVNWATTPSSQKKDTSNHFHVFV 100
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T + +R F+ +G++ ++ K GFV F ++ AE A+ + G
Sbjct: 101 GDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQ 160
Query: 342 QLGGQNIRLSWGR----SPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYG 397
LGG+ IR +W +P N Q P Q YE+ ++PQ+ ++Y G
Sbjct: 161 WLGGRQIRTNWATRKPPAPKNTQ-DASPKQLR---------YEDV-VNQSSPQNCTVYCG 209
Query: 398 G 398
G
Sbjct: 210 G 210
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 83 TTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFV 142
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF---GAGEKRDDTP------------- 172
F ++ AE + G + G + R NWA+ +D +P
Sbjct: 143 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKNTQDASPKQLRYEDVVNQSS 200
Query: 173 --DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + ++D+++++TF S G + I KGY F+RF
Sbjct: 201 PQNCTVYCGGIQSGLSDHLMRQTF-----SPFGQIMEIRVFP--EKGYSFIRFSSHESAA 253
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 254 HAIVSVNGT 262
>gi|296223620|ref|XP_002757701.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Callithrix
jacchus]
gi|403260488|ref|XP_003922703.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 375
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 160/312 (51%), Gaps = 28/312 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---- 177
Query: 262 QYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS +GQ++ +++
Sbjct: 178 --PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 235
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ---PDP- 365
K FV+F A A+ +NGT + G ++ WG+ +P +Q+Q P P
Sbjct: 236 PDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQSQIGYPQPY 295
Query: 366 NQWNAGYYGYAQ 377
QW +YG AQ
Sbjct: 296 GQWGQ-WYGNAQ 306
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 28/191 (14%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + + G++ K ++ + +Q D N+ VFV
Sbjct: 58 HAAAALAAMNG----------------RKIMGKE--VKVNWATTPSSQKKDTSNHFHVFV 99
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 100 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 159
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 160 WLGGRQIRTNW 170
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 200 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 141/286 (49%), Gaps = 28/286 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L T F+ G V + K+IR I+ + FIE+ + A+ L
Sbjct: 8 KTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETS---IDPFAFIEYANHQSAQTALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP-DHTIFVGDLAADVTDYMLQETFRARYPS 200
N E R+NWA+ + + DT H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRMFLKKE--IRVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
++V D T +++GY FV F ++E A+ MNG + +R +R +T K
Sbjct: 122 ISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWSTRK------ 175
Query: 261 QQYPKASYQNSQVAQS-----------DDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQ 308
P A +NS+ +S + P NTTV+ G + +TDE +++ F+Q+G
Sbjct: 176 ---PPAPRENSKGIKSGKTPGFEEIYNNTSPTNTTVYCGGFPPNAITDELIQKHFAQFGH 232
Query: 309 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ ++ K F++FA + A A+ + +++ G ++ WG+
Sbjct: 233 INDTRVFKDKGYAFIRFASKESAARAIEGTHNSEVQGHPVKCYWGK 278
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC---GFVQFADRSCAEEALRMLNG 340
T++VGNLD+ VT+E L LFSQ G + KI F+++A+ A+ AL +N
Sbjct: 9 TLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETSIDPFAFIEYANHQSAQTALAAMNK 68
Query: 341 TQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 374
+ IR++W S N Q + D +Q + + G
Sbjct: 69 RMFLKKEIRVNWATSAGN-QPKTDTSQHHHIFVG 101
>gi|229594706|ref|XP_001022345.3| RNA binding protein [Tetrahymena thermophila]
gi|225566688|gb|EAS02100.3| RNA binding protein [Tetrahymena thermophila SB210]
Length = 482
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 108/202 (53%), Gaps = 27/202 (13%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
++RTLW+GD++ WM E ++ + F G+VV+VK+IR K+T GY F+EF + AER+
Sbjct: 5 DLRTLWVGDIENWMTEQFIESVFNKVGKVVSVKLIRTKETSLPAGYCFVEFQTHEQAERI 64
Query: 140 LQTFNGTPMPNGEQNFRLNW----------------ASFGAGEKRDD-----------TP 172
L +N +P + FR+NW A+ G G +
Sbjct: 65 LMNYNQQLIPGTQNTFRMNWGKNPTNTGIIKQPTTQANNGYGNNQYGMMQQPVIQMPPIQ 124
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ +I+VG+L + + L E FR++Y S G+K++ + + +KGYGFV+F + E RA
Sbjct: 125 EFSIYVGELELGINEQQLAEHFRSKYSSVIGSKIITEPTSKMSKGYGFVKFSNPIEGQRA 184
Query: 233 MTEMNGVFCSTRPMRIGPATNK 254
+ EMNG + +++ A ++
Sbjct: 185 IHEMNGSLFKGKFIKVSQAVSR 206
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 19/199 (9%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T++VGD+ +T+ ++ F + K++ + T GY FV F + R +
Sbjct: 8 TLWVGDIENWMTEQFIESVFN-KVGKVVSVKLIRTKETSLPAGYCFVEFQTHEQAERILM 66
Query: 235 EMNGVFC----STRPMRIGPA-TNKKTVSGQQQYPKASYQNSQVAQSDDDP------NNT 283
N +T M G TN + Y N+Q
Sbjct: 67 NYNQQLIPGTQNTFRMNWGKNPTNTGIIKQPTTQANNGYGNNQYGMMQQPVIQMPPIQEF 126
Query: 284 TVFVGNLDSIVTDEHLRELF-SQYGQLVHVKI---PAGKRC---GFVQFADRSCAEEALR 336
+++VG L+ + ++ L E F S+Y ++ KI P K GFV+F++ + A+
Sbjct: 127 SIYVGELELGINEQQLAEHFRSKYSSVIGSKIITEPTSKMSKGYGFVKFSNPIEGQRAIH 186
Query: 337 MLNGTQLGGQNIRLSWGRS 355
+NG+ G+ I++S S
Sbjct: 187 EMNGSLFKGKFIKVSQAVS 205
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 158/312 (50%), Gaps = 28/312 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---- 177
Query: 262 QYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
PK++Y+++ S D+ P N TV+ G + S +T++ +R+ FS +GQ++ +++
Sbjct: 178 --PKSTYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 235
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ----PDP 365
K F++F+ A A+ +NGT + G ++ WG+ +P +Q Q P
Sbjct: 236 PDKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPAY 295
Query: 366 NQWNAGYYGYAQ 377
QW +YG AQ
Sbjct: 296 GQWGQ-WYGNAQ 306
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 28/191 (14%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + + G++ K ++ + +Q D N+ VFV
Sbjct: 58 HAAAALAAMNG----------------RKIMGKE--VKVNWATTPSSQKKDTSNHFHVFV 99
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 100 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 159
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 160 WLGGRQIRTNW 170
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY F+RF
Sbjct: 200 PGNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFIRFSSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKS 115
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT
Sbjct: 116 AF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 174
Query: 253 NK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
K S Q+ K V QS P N TV+ G + S +TD+ +R+ FS +GQ++
Sbjct: 175 RKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQTFSPFGQIM 232
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQAQPDPNQWN 369
+++ K FV+F+ A A+ +NGT + G ++ WG+ SP + ++
Sbjct: 233 EIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVIRFF 292
Query: 370 AGYYGYAQGYENYGYAAAAPQDPSMYYGG---YPGYGNYQQPQQPQ 412
Y + Q + YG PQ Y P YG Y QP Q
Sbjct: 293 VDYSQWGQWSQVYG----NPQQYGQYMANGWQVPPYGVYGQPWNQQ 334
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 84 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 144 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 201
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 202 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 254
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 255 HAIVSVNG 262
>gi|346972032|gb|EGY15484.1| nucleolysin TIA-1 [Verticillium dahliae VdLs.17]
Length = 489
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 122/249 (48%), Gaps = 22/249 (8%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAA 183
YGF+E+ AER +QT NG + E R+NWA ++DT +H IFVGDL+
Sbjct: 138 YGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTTSKEDTSNHFHIFVGDLSN 195
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+V D +L + F A + S A+V+ D TGR++GYGFV F D + +A++ M+G + +
Sbjct: 196 EVNDEILSQAFAA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGS 254
Query: 244 RPMRIGPATNK------------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTV 285
R +R A K T G Q+P + +V + TTV
Sbjct: 255 RAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPFGHHQFPAHGMASYEVILAQTPNWQTTV 314
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
+VGNL T + LF +G +V + A + F++ A A+ +NG + G
Sbjct: 315 YVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMESHEAAAMAICQMNGYNVNG 374
Query: 346 QNIRLSWGR 354
+ ++ SWG+
Sbjct: 375 RPLKCSWGK 383
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 45/207 (21%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL +++ L+ FA G V +V+ + +TG+ GYGF+ F R AE+ L +
Sbjct: 188 IFVGDLSNEVNDEILSQAFAAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSM 247
Query: 144 NGTPMPNGEQNFRLNWAS-----------------------FGAGE-----------KRD 169
+G + G + R NWA+ FG +
Sbjct: 248 DGEWL--GSRAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPFGHHQFPAHGMASYEVILA 305
Query: 170 DTPD--HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
TP+ T++VG+L T + F + V++ +G+ F++
Sbjct: 306 QTPNWQTTVYVGNLTPYTTPNDVVPLF-------QNFGFVVESRFQADRGFAFIKMESHE 358
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNK 254
A+ +MNG + RP++ +K
Sbjct: 359 AAAMAICQMNGYNVNGRPLKCSWGKDK 385
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 145/279 (51%), Gaps = 17/279 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---- 177
Query: 262 QYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS +GQ++ +++
Sbjct: 178 --PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 235
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
K FV+F A A+ +NGT + G ++ WG+
Sbjct: 236 PDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 274
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 28/191 (14%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + + G++ K ++ + +Q D N+ VFV
Sbjct: 58 HAAAALAAMNG----------------RKIMGKE--VKVNWATTPSSQKKDTSNHFHVFV 99
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 100 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 159
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 160 WLGGRQIRTNW 170
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 200 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 145/279 (51%), Gaps = 17/279 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---- 177
Query: 262 QYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS +GQ++ +++
Sbjct: 178 --PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 235
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
K FV+F A A+ +NGT + G ++ WG+
Sbjct: 236 PDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 274
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 27/190 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+D T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ MNG + + G++ K ++ + +Q D N+ VFVG
Sbjct: 59 AAAALAAMNG----------------RKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVG 100
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 101 DLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 160
Query: 343 LGGQNIRLSW 352
LGG+ IR +W
Sbjct: 161 LGGRQIRTNW 170
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 200 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 145/310 (46%), Gaps = 22/310 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E L F+ G V K+IR + Y F+EF + A L
Sbjct: 8 RTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGN---DPYAFVEFTNHQCAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N N E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSFLNKE--MKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
++V D T ++KGY FV F +SE A+ MNG + +R +R +T K
Sbjct: 122 ISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 261 QQ--YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
++ + S N + + P N TV+ G + +TD+ + + FS +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDDLITKTFSPFGTIQDIRVFKDK 241
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS---------PSNKQAQPDPNQWN 369
F++F + A A+ + T++ G ++ WG+ +N QAQ Q
Sbjct: 242 GYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQ----QVT 297
Query: 370 AGYYGYAQGY 379
AG YA GY
Sbjct: 298 AGAGQYAYGY 307
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEE 333
++ N T++VGNLD+ V++E L LFSQ G + KI P FV+F + CA
Sbjct: 2 SEESNPRTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAAT 61
Query: 334 ALRMLNGTQLGGQNIRLSWGRSPSNK 359
AL +N + ++++W SP N+
Sbjct: 62 ALAAMNKRSFLNKEMKVNWATSPGNQ 87
>gi|116191711|ref|XP_001221668.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
gi|88181486|gb|EAQ88954.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
Length = 413
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 150/324 (46%), Gaps = 42/324 (12%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAA 183
YGF+E+ AER +QT NG + E R+NWA ++DT +H IFVGDL+
Sbjct: 71 YGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSN 128
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+V D +L + F A + S A+V+ D TGR++GYGFV F + + +A++ M+G + +
Sbjct: 129 EVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGS 187
Query: 244 RPMRIGPATNK------------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTV 285
R +R A K T G +P + + + TT
Sbjct: 188 RAIRCNWANQKGQPSMAQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVNQTPAWQTTC 247
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
+VGNL T + + LF +G +V + A + FV+ A A+ LNG + G
Sbjct: 248 YVGNLTPYTTQQDIVPLFQNFGFVVESRFQADRGFSFVKMDTHENAAMAICQLNGYNVNG 307
Query: 346 QNIRLSWG--RSPSNKQAQPDPNQWNA-------GY------YGYAQGYENYGYAAAAPQ 390
+ ++ SWG ++PS+ Q Q DPNQ + GY Y G Y AAAP
Sbjct: 308 RPLKCSWGKDKTPSHPQ-QFDPNQQYSPQSAQTPGYPTTPSTYFNQYGSGTYPREAAAPN 366
Query: 391 D----PSMYYGGYPGYGNYQQPQQ 410
P M Y G P G Y + QQ
Sbjct: 367 SVVNAPPMGYSGPPSAGGYGRGQQ 390
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 83/217 (38%), Gaps = 37/217 (17%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL +++ L F+ G V +V+ + +TG+ GYGF+ F R AE+ L +
Sbjct: 121 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSM 180
Query: 144 NGTPMPNGEQNFRLNWASFGAGEK-------------------RDDTPDHTIFVGDL--- 181
+G + G + R NWA+ P H + D+
Sbjct: 181 DGEWL--GSRAIRCNWANQKGQPSMAQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVN 238
Query: 182 ----------AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
++T Y Q+ P + V++ +G+ FV+
Sbjct: 239 QTPAWQTTCYVGNLTPYTTQQDI---VPLFQNFGFVVESRFQADRGFSFVKMDTHENAAM 295
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASY 268
A+ ++NG + RP++ +K QQ P Y
Sbjct: 296 AICQLNGYNVNGRPLKCSWGKDKTPSHPQQFDPNQQY 332
>gi|321262697|ref|XP_003196067.1| non-translatable mRNA -binding protein [Cryptococcus gattii WM276]
gi|317462542|gb|ADV24280.1| Non-translatable mRNA -binding protein, putative [Cryptococcus
gattii WM276]
Length = 434
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 149/323 (46%), Gaps = 42/323 (13%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGF 127
+ P Q + + L++G+L + + L FA G VV+ K+I RN Q G YGF
Sbjct: 10 ITPGQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFN-YGF 68
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTD 187
+E+ AE+ L T NG + + E R+NWA G K D + +FVGDL+ +V D
Sbjct: 69 VEYADMRSAEQALTTLNGRKIFDAE--IRVNWAYQGNQNKEDTQHHYHVFVGDLSPEVND 126
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
+L + F A + S A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R
Sbjct: 127 DVLSKAFGA-FGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIR 185
Query: 248 IGPATNKKTVSGQQQ--------------------YPKA----------------SYQNS 271
+ A K G + P A + +
Sbjct: 186 VNWANQKTQTGGTRTGGGTPSYSAPPMGAPPVPAGVPSAYGAAAPGVVPGVGVGGAVGSF 245
Query: 272 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 331
+ S NTTV+VGNL T L LF YG +V +++ A + FV+ A
Sbjct: 246 ETVASQTPEFNTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHQNA 305
Query: 332 EEALRMLNGTQLGGQNIRLSWGR 354
A+ L + G+ I+ SWG+
Sbjct: 306 ALAITHLQNQLVHGRPIKCSWGK 328
>gi|188219593|ref|NP_071320.2| nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]
gi|114577932|ref|XP_001141475.1| PREDICTED: uncharacterized protein LOC459303 isoform 1 [Pan
troglodytes]
gi|397521826|ref|XP_003830987.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Pan paniscus]
gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_a [Homo sapiens]
gi|410254976|gb|JAA15455.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298558|gb|JAA27879.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353837|gb|JAA43522.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 375
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 159/312 (50%), Gaps = 28/312 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---- 177
Query: 262 QYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS +GQ++ +++
Sbjct: 178 --PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 235
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ---PDP- 365
K FV+F A A+ +NGT + G ++ WG+ +P +Q Q P P
Sbjct: 236 PDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQPY 295
Query: 366 NQWNAGYYGYAQ 377
QW +YG AQ
Sbjct: 296 GQWGQ-WYGNAQ 306
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 28/191 (14%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + + G++ K ++ + +Q D N+ VFV
Sbjct: 58 HAAAALAAMNG----------------RKIMGKE--VKVNWATTPSSQKKDTSNHFHVFV 99
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 100 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 159
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 160 WLGGRQIRTNW 170
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 200 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|380816028|gb|AFE79888.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
gi|383421175|gb|AFH33801.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
Length = 375
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 159/312 (50%), Gaps = 28/312 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---- 177
Query: 262 QYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS +GQ++ +++
Sbjct: 178 --PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 235
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ---PDP- 365
K FV+F A A+ +NGT + G ++ WG+ +P +Q Q P P
Sbjct: 236 PDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQPY 295
Query: 366 NQWNAGYYGYAQ 377
QW +YG AQ
Sbjct: 296 GQWGQ-WYGNAQ 306
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 28/191 (14%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + + G++ K ++ + +Q D N+ VFV
Sbjct: 58 HAAAALAAMNG----------------RKIMGKE--VKVNWATTPSSQKKDTSNHFHVFV 99
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 100 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 159
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 160 WLGGRQIRTNW 170
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 200 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|443687463|gb|ELT90434.1| hypothetical protein CAPTEDRAFT_110688, partial [Capitella teleta]
Length = 353
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 18/286 (6%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E L F G K+I +TG E Y F+EF + A L T N
Sbjct: 1 YVGNLDPTVTEDLLMALFGSIGPCKGCKIIH--ETGN-EPYAFVEFSEHSSAALALGTMN 57
Query: 145 GTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKG 203
E ++NWA+ G K+D + H IFVGDL+ D+ L+E F+ + +
Sbjct: 58 KRTCFGRE--MKVNWATSPGTQTKQDTSKHHHIFVGDLSPDIETPQLREAFKP-FGTISD 114
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQY 263
K++ D T ++KGYGFV + + E A+ MNG + +R +R A K
Sbjct: 115 CKIIRDPQTLKSKGYGFVSYVERKEAENAINSMNGQWIGSRAIRTNWAIRKPAA------ 168
Query: 264 PKASYQNSQVAQSDD-----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
P N+Q D+ P N TV+ G + S +T++ +R F ++G++ +++ K
Sbjct: 169 PATKETNAQPLTFDEVFKKSSPTNCTVYCGGILSGLTEDLVRSAFGEHGKIEEIRVFKDK 228
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 364
F+++ + A EA+ ++ T++GG ++ SWG+ + A P+
Sbjct: 229 GYAFIRYNTKEAATEAIVKMHQTEVGGHTVKCSWGKESKDSPADPN 274
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL ++ L F G + K+IR+ QT + +GYGF+ ++ R AE + +
Sbjct: 88 IFVGDLSPDIETPQLREAFKPFGTISDCKIIRDPQTLKSKGYGFVSYVERKEAENAINSM 147
Query: 144 NGTPMPNGEQNFRLNWA-----------------SFGAGEKRDDTPDHTIFVGDLAADVT 186
NG + G + R NWA +F K+ + T++ G + + +T
Sbjct: 148 NGQWI--GSRAIRTNWAIRKPAAPATKETNAQPLTFDEVFKKSSPTNCTVYCGGILSGLT 205
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
+ +++ F + + +V D KGY F+R+ + A+ +M+
Sbjct: 206 EDLVRSAF-GEHGKIEEIRVFKD------KGYAFIRYNTKEAATEAIVKMH 249
>gi|224115710|ref|XP_002332123.1| predicted protein [Populus trichocarpa]
gi|222874943|gb|EEF12074.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 143/294 (48%), Gaps = 27/294 (9%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R +++G++ + + L FA G + K+IR ++ YGF+++ ++ A +
Sbjct: 44 CRRVYVGNIHVNVTDKLLAEVFATAGPLAGCKLIRKDKSS----YGFVDYHDQSSAALAI 99
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
T +G + Q ++NWA +G ++ D + +FVGDL+ +V D L F +PS
Sbjct: 100 MTLHGRQLYG--QALKVNWA-YGNSQREDTSGHFHVFVGDLSPEVIDANLFACFSV-FPS 155
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A+V+ D TGR+KGYGFV F ++ E A+ ++ G + R +R AT K V
Sbjct: 156 CSNARVMWDHKTGRSKGYGFVSFRNQQEAQSAINDLTGKWLGNRQIRCNWAT--KGVESN 213
Query: 261 QQYPKASYQNSQVAQS---------------DDDPNNTTVFVGNLDSIVTDEHLRELFSQ 305
+ + QN+ V + +++P TTV+VGNL VT L F
Sbjct: 214 EDKQNSDNQNAVVLTNGSSEGGQESTNEEAPENNPAYTTVYVGNLSHEVTQAELHRHFHA 273
Query: 306 YGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G V V++ K GFV++ A A++ NG + G+ ++ SWG P+
Sbjct: 274 LGAGVIEDVRVQRDKGFGFVRYNTHEEAASAIQTGNGKIVCGKPVKCSWGSKPT 327
>gi|149391493|gb|ABR25764.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 151
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 93/137 (67%), Gaps = 6/137 (4%)
Query: 274 AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEE 333
SD D N TV+VG LD V+++ LR+ F++YG + VKIP GK+CGFVQF R+ AEE
Sbjct: 14 GHSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEE 73
Query: 334 ALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQGYENYGYAAAAPQDP 392
AL+ LNG+ +G Q +RLSWGRSPS+KQ++ D ++ N YYG Y YGYA+ P P
Sbjct: 74 ALQGLNGSVIGKQAVRLSWGRSPSHKQSRADSGSRRNNMYYG-TPFYGGYGYASPVPH-P 131
Query: 393 SMY---YGGYPGYGNYQ 406
+MY YG YP YG+ Q
Sbjct: 132 NMYAAAYGAYPVYGSQQ 148
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+++G L + E L FA G+V +VK+ KQ GF++F+SR AE LQ
Sbjct: 23 RTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWA 160
NG+ + G+Q RL+W
Sbjct: 77 GLNGSVI--GKQAVRLSWG 93
>gi|195388164|ref|XP_002052753.1| GJ17734 [Drosophila virilis]
gi|194149210|gb|EDW64908.1| GJ17734 [Drosophila virilis]
Length = 345
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYSLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
Y S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG V T+P++I A K
Sbjct: 124 YTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYVGLGTKPIKICNAVPK 180
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNT---TVFVGNLDS 292
+NG +P+ P TN P ++ + + S P N +V+VG+L S
Sbjct: 68 LNG-----KPI---PGTN----------PIVRFRLNSASNSYKLPGNEREFSVWVGDLSS 109
Query: 293 IVTDEHLRELF-SQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQLGG 345
V D L ++F S+Y + K+ K GFV+F + AL +NG LG
Sbjct: 110 DVDDYSLYKVFSSKYTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYVGLGT 169
Query: 346 QNIRL 350
+ I++
Sbjct: 170 KPIKI 174
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 142/297 (47%), Gaps = 22/297 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V K+IR + Y F+EF + A L
Sbjct: 8 KTLYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPGN---DPYAFVEFTNHQSASTALI 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA+ + + DT +H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRVFLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETDTLREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPP--- 178
Query: 261 QQYPKASYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
P+A N Q D P NTTV+ G S +TD+ + + FS++G + ++
Sbjct: 179 ---PRAEKPNQSKKQITFDEVYNQTSPTNTTVYCGGFASGLTDDLVTKTFSRFGAIQDIR 235
Query: 314 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNA 370
+ K F++F + A A+ ++ T++ G ++ WG+ N PD N +A
Sbjct: 236 VFKDKGYAFIKFVSKESATHAIENIHNTEINGHTVKCFWGK--ENGGLGPDVNALSA 290
>gi|116181152|ref|XP_001220425.1| hypothetical protein CHGG_01204 [Chaetomium globosum CBS 148.51]
gi|88185501|gb|EAQ92969.1| hypothetical protein CHGG_01204 [Chaetomium globosum CBS 148.51]
Length = 183
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 48/174 (27%)
Query: 82 RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+++ WMDET++ N C GE V VKVIR++ +G G
Sbjct: 41 KTLWMGEMEGWMDETFIKNICRTVLGEDVQVKVIRDRNSGDDRG---------------- 84
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
P+++IFVGDL +V +++L F++R+PS
Sbjct: 85 -------------------------------PEYSIFVGDLGPEVNEFVLVSLFQSRFPS 113
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
K AK++ D +TG+++GYGFVRF DES+Q RA+ EM GV+C RPMRI AT K
Sbjct: 114 CKSAKIMTDAMTGQSRGYGFVRFSDESDQQRALVEMQGVYCGNRPMRISTATPK 167
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 175/378 (46%), Gaps = 63/378 (16%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F+ G + K+I + T + Y F+EF A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRD----------DTPDH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AINGRKIMGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNS------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ + + P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSN 358
+GQ++ V++ K FV+F+ A A+ +NGT + G ++ WG+ +P
Sbjct: 236 PFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMLNPVQ 295
Query: 359 KQAQPD-------------------------PNQWNAGYYG-YAQGYENYGYAAAAPQDP 392
+ ++P PN W YG Y Q + GY + P
Sbjct: 296 QVSEPSQISFPPPYGQWGQWYGGAQQISQYVPNGWQMPAYGVYGQAWNQQGY-SQTPSSA 354
Query: 393 SMYYGGYPGYGNYQQPQQ 410
+ + G P YG QP Q
Sbjct: 355 ATWVG--PNYGVQPQPGQ 370
>gi|302694831|ref|XP_003037094.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
gi|300110791|gb|EFJ02192.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
Length = 435
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 142/303 (46%), Gaps = 36/303 (11%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYLDMRAAETALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D T + +FVGDL+ +V D +L + F A + +
Sbjct: 77 TLNGRRIFDTE--IRVNWAYQGQQNKEDTTNHYHVFVGDLSPEVNDDVLAKAFSA-FGTL 133
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K S
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSLGG 193
Query: 262 QYPKASYQNSQV-----------AQSDDDPNN-------------------TTVFVGNLD 291
S + A P N TTV+VGNL
Sbjct: 194 GGGGGGPVGSPIGGPPAMARPMGAGGAPAPMNLAGGPLSYEQVLTQTPAYNTTVYVGNLV 253
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
T L LF G L +++ A + FV+ A A+ L G + G+ I+ S
Sbjct: 254 PYCTQADLIPLFQTIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCS 313
Query: 352 WGR 354
WG+
Sbjct: 314 WGK 316
>gi|341893520|gb|EGT49455.1| CBN-TIAR-2 protein [Caenorhabditis brenneri]
Length = 420
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 148/300 (49%), Gaps = 39/300 (13%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + + ++ T F G V K+I + Q G + Y FIEF A + LQ
Sbjct: 38 RTLFVGNLDPAVTDEFIATLFNQMGAVTKAKIIFDFQ-GLADPYAFIEFSDHNQAAQALQ 96
Query: 142 TFNGTPMPNGEQNFRLNWASF----GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ NG + + E R+NWA G ++ D H +FVGDL++++ L+E F
Sbjct: 97 SMNGRQLLDRE--LRVNWAVEPNQPGDSSRKMDYSRHFHVFVGDLSSEIDSTKLKEAFLP 154
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-- 254
+ AK++ D T + KGYGFV + + RA+ +MNG + R +R A+ K
Sbjct: 155 -FGEVSEAKIIRDTTTNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWASRKPG 213
Query: 255 -----------------KTVSG--QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 295
+ G ++ Y + +Q S P+NT+V+VG + S+
Sbjct: 214 EEGERRGGGFERDRERGERFHGGFEKTYDEIFHQTS--------PDNTSVYVGQIGSLTE 265
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
DE +R F ++G + V+I + FV+F + A A+ +N T++ GQ +R SWG+S
Sbjct: 266 DE-IRRAFDRFGAINEVRIFKLQGYAFVKFEQKEPAARAIVQMNNTEIMGQMVRCSWGKS 324
>gi|194766221|ref|XP_001965223.1| GF24033 [Drosophila ananassae]
gi|190617833|gb|EDV33357.1| GF24033 [Drosophila ananassae]
Length = 339
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ AM +MNG + TRP++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKTAMYDMNGYIGLGTRPIKICNAVPK 180
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNT---TVFVGNLDS 292
+NG +P+ P TN P ++ + + S P N +V+VG+L S
Sbjct: 68 LNG-----KPI---PGTN----------PIVRFRLNSASNSYKLPGNEREFSVWVGDLSS 109
Query: 293 IVTDEHLRELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGG 345
V D L ++FS + +++ + K GFV+F + A+ +NG LG
Sbjct: 110 DVDDYQLYKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKTAMYDMNGYIGLGT 169
Query: 346 QNIRL 350
+ I++
Sbjct: 170 RPIKI 174
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 170/355 (47%), Gaps = 46/355 (12%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK--------------- 117
+ GQP RTL++G+L + E + F+ G + K+I +
Sbjct: 2 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVL 58
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Q + Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 59 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 116
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 117 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 175
Query: 238 GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLD 291
G + R +R AT K PK++ +NS +D P N TV+ G +
Sbjct: 176 GQWLGGRQIRTNWATRKPPA------PKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIA 229
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
S +TD+ +R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++
Sbjct: 230 SGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 289
Query: 352 WGR-SPSNKQA--QPDPNQWNAGYYGYAQGYEN---YG-YAAAAPQDPSMYYGGY 399
WG+ SP + Q D +QW ++Q Y N YG Y A Q PS YG Y
Sbjct: 290 WGKESPDMTKNFQQVDYSQWGQ----WSQVYGNPQQYGQYMANGWQVPS--YGMY 338
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 100 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 159
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 160 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSS 217
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 218 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 270
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 271 HAIVSVNGT 279
>gi|440297981|gb|ELP90622.1| nucleolysin TIA-1, putative [Entamoeba invadens IP1]
Length = 305
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 143/282 (50%), Gaps = 20/282 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+++ + L +DET L+ F+ G VV+ K++++K TG YGFIEFI AE +
Sbjct: 39 KSVHVAGLHESVDETLLSRIFSIVGHVVSCKIMKDK-TGTHARYGFIEFIDHTTAEFAKE 97
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NW + D +FVG L +VT+ +L + F A++
Sbjct: 98 NMNGRLVYGKE--LKVNWTH---DSQSDAKGSFKLFVGGLHTEVTNEILYQNF-AKFGRV 151
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI--GPATNKKTVSG 259
A+V+ +G+++GYGFV F + + AM MNG R +++ G AT K T +
Sbjct: 152 SDARVLRYSQSGKSQGYGFVTFIRKEDAETAMQMMNGEKIQGRTVKVNWGTATQKPTETV 211
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PA 316
++ + + S + S N V+VG + + +R+LF +G+++ +KI A
Sbjct: 212 KRGFDEISRETSNT--------NNNVYVGGIPKETEESTMRKLFGDFGEIIDLKIMRTDA 263
Query: 317 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
K GFV+F A +A+ MLNG QL G + WG+ N
Sbjct: 264 EKAYGFVRFVSHDNATKAIMMLNGYQLNGGCLNCMWGKESFN 305
>gi|392571669|gb|EIW64841.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 437
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 141/306 (46%), Gaps = 39/306 (12%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + + +FVGDL+ +V D +L + F A + +
Sbjct: 77 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSA-FGTL 133
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K S
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSPGG 193
Query: 262 QYPKASY--------------QNSQVAQSDDDPN-------------------NTTVFVG 288
NS P NTTV+VG
Sbjct: 194 PGGPGGPGGPGGPGGPGGPPRSNSMGGGGAPAPMNFTGGPLSYEGVVTQTPAYNTTVYVG 253
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
NL T L LF G L +++ + + FV+ A A+ L G + G+ I
Sbjct: 254 NLVPYATQADLIPLFQSIGYLSEIRMQSDRGFAFVKLDTHEHAAMAIVQLQGQLVHGRPI 313
Query: 349 RLSWGR 354
+ SWG+
Sbjct: 314 KCSWGK 319
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 276 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADR 328
S + P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D
Sbjct: 9 SAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDM 68
Query: 329 SCAEEALRMLNGTQLGGQNIRLSW 352
AE AL+ LNG ++ IR++W
Sbjct: 69 RAAETALQTLNGRKIFDTEIRVNW 92
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 151/295 (51%), Gaps = 11/295 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G + K+I + + + Y F+EF+ A
Sbjct: 10 KTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSS--DPYCFVEFVDHKDAASARA 67
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T N + E ++NWA+ + +K+D + +FVGDL+ D+T ++ F A +
Sbjct: 68 TMNKRKILGKE--VKVNWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAF-APFGHI 124
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--KTVSG 259
A+V+ D TG++KGYGFV F ++ + A+++M G + R +R AT K S
Sbjct: 125 SDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKSF 184
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
Q K + V QS P+N TV+ G + S +T+ +++ FS +GQ++ +++ K
Sbjct: 185 QDNGSKHLKFDDIVTQSS--PHNCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPDKG 242
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 374
FV+F+ A A+ +NGT + G ++ WG+ + Q ++N Y+G
Sbjct: 243 YSFVRFSSHDSAAHAIVSVNGTVIEGNLVKCFWGKESPDMQKNSQQVEYN--YWG 295
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 27/190 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+++ T++VG+L+ DVT+ ++ + F P K K++ D + + Y FV F D +
Sbjct: 5 EESLSKTLYVGNLSRDVTEILILQLFSQIGP-CKSCKMITDHTS--SDPYCFVEFVDHKD 61
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A M NK+ + G++ K ++ S Q D N+ VFVG
Sbjct: 62 AASARATM----------------NKRKILGKE--VKVNWATSPSCQKKDTSNHFHVFVG 103
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L +T E +R F+ +G + ++ K GFV F ++ AE A+ + G
Sbjct: 104 DLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQW 163
Query: 343 LGGQNIRLSW 352
L G+ IR +W
Sbjct: 164 LQGRQIRTNW 173
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG----FVQFADRSCAE 332
D++ + T++VGNL VT+ + +LFSQ G K+ FV+F D A
Sbjct: 4 DEESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAA 63
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPS 357
A +N ++ G+ ++++W SPS
Sbjct: 64 SARATMNKRKILGKEVKVNWATSPS 88
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 140/298 (46%), Gaps = 13/298 (4%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ QG + RTL++G+L + E L F G+V K+I + Y F+EF
Sbjct: 4 KDQGNDCQPRTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPGN---DPYCFVEFSD 60
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQ 191
A L N E ++NWA+ G K D + H IFVGDL+ ++ L+
Sbjct: 61 HQSAASALLAMNKRLCFGKE--MKVNWATSPGNTPKLDTSKHHHIFVGDLSPEIETTQLR 118
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
+ F A + +VV D T ++KGYGFV F +++ A+ MNG + +R +R A
Sbjct: 119 DAF-APFGDISDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTMNGQWLGSRAIRTNWA 177
Query: 252 TNKKTVSGQQQYPKASYQNSQVAQSD----DDPNNTTVFVGNLDSIVTDEHLRELFSQYG 307
T K + Q + + + P N TV+ G + +++E +++ FS YG
Sbjct: 178 TRKPPANRTQAEVDITTSTKPLTFDEVYNQSSPTNCTVYCGGITQGLSEELMQKTFSSYG 237
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS--NKQAQP 363
+ +++ K F++F + A A+ + + + GQ ++ SWG+ + N Q QP
Sbjct: 238 AIQEIRVFKDKGYAFIRFGTKEAATHAIVATHNSDVNGQTVKCSWGKEATDPNNQQQP 295
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 149/281 (53%), Gaps = 6/281 (2%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F+ G + K+I + TG + Y F+EF A L
Sbjct: 9 RTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDT-TGN-DPYCFVEFYENRHAAAALA 66
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + ++ ++NWAS + +K+D + +FVGDL+ +++ ++ F A +
Sbjct: 67 AMNGRKILG--KDMKVNWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAF-APFGKI 123
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV-SGQ 260
A+VV D TG++KGYGF+ F ++ + A+ +MNG + R +R AT K +
Sbjct: 124 SDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKSN 183
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 320
+ + + + + + P+N TV+ G + S ++D+ +R+ FS +GQ++ +++ K
Sbjct: 184 NEGASSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGY 243
Query: 321 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
FV+F A A+ +NGT + G ++ WG+ ++ ++
Sbjct: 244 SFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRS 284
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 33/236 (13%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D+ T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 4 DEDQPRTLYVGNLSRDVTEALILQVFSQIGP-CKSCKMILD--TTGNDPYCFVEFYENRH 60
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ MNG + M++ A+ + Q D N+ VFVG
Sbjct: 61 AAAALAAMNGRKILGKDMKVNWASTPSS------------------QKKDTSNHFHVFVG 102
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L ++ + +R F+ +G++ ++ K GF+ F ++ AE A++ +NG
Sbjct: 103 DLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQW 162
Query: 343 LGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG 398
LGG+ IR +W + K + P N N G YE ++P + ++Y GG
Sbjct: 163 LGGRQIRTNWA---TRKPSAPKSN--NEGASSKHLSYEEV-LNQSSPSNCTVYCGG 212
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 28/215 (13%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
+ P Q+ +++GDL + + FA G++ +V+++ TG+ +GYGFI
Sbjct: 84 STPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGYGFI 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF----------GAGEKR--------DD 170
FI++ AE +Q NG + G + R NWA+ GA K
Sbjct: 144 SFINKWDAESAIQQMNGQWL--GGRQIRTNWATRKPSAPKSNNEGASSKHLSYEEVLNQS 201
Query: 171 TPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
+P + T++ G +A+ ++D ++++TF P + +++ KGY FVRF
Sbjct: 202 SPSNCTVYCGGIASGLSDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFDSHEGA 254
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP 264
A+ +NG ++ + QQ P
Sbjct: 255 AHAIVSVNGTCIEGHTVKCYWGKETADMRSMQQMP 289
>gi|405119959|gb|AFR94730.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cryptococcus neoformans var. grubii H99]
Length = 434
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 149/323 (46%), Gaps = 42/323 (13%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGF 127
+ P Q + + L++G+L + + L FA G VV+ K+I RN Q G YGF
Sbjct: 10 ITPGQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFN-YGF 68
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTD 187
+E+ A++ L T NG + + E R+NWA G K D + +FVGDL+ +V D
Sbjct: 69 VEYADMRSADQALTTLNGRKIFDAE--IRVNWAYQGNQNKEDTQHHYHVFVGDLSPEVND 126
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
+L + F A + S A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R
Sbjct: 127 DVLSKAFGA-FGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIR 185
Query: 248 IGPATNKKTVSGQQQ--------------------YPKA----------------SYQNS 271
+ A K G + P A + +
Sbjct: 186 VNWANQKTQTGGTRTGGATPSYSAPSMGAPPAPAGIPSAYGAPVPGVVPGVGVGGAVGSY 245
Query: 272 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 331
+ S NTTV+VGNL T L LF YG +V +++ A + FV+ A
Sbjct: 246 ETVASQTPEFNTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHQNA 305
Query: 332 EEALRMLNGTQLGGQNIRLSWGR 354
A+ L + G+ I+ SWG+
Sbjct: 306 ALAITHLQNQLVHGRPIKCSWGK 328
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 148/290 (51%), Gaps = 28/290 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F+ G + K+I + T + Y F+EF A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRD----------DTPDH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNS------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ + + P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+GQ++ V++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 236 PFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 148/290 (51%), Gaps = 28/290 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F+ G + K+I + T + Y F+EF A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRD----------DTPDH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNS------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ + + P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+GQ++ V++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 236 PFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 162/323 (50%), Gaps = 37/323 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + +T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 66
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 67 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 124
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 125 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 183
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS
Sbjct: 184 ATRKPPA------PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFS 237
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSN 358
+GQ++ +++ K FV+F A A+ +NGT + G ++ WG+ +P
Sbjct: 238 PFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ 297
Query: 359 KQAQ---PDP-NQWNAGYYGYAQ 377
+Q Q P P QW +YG AQ
Sbjct: 298 QQNQIGYPQPYGQWGQ-WYGNAQ 319
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 15/191 (7%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMDVRTAGNDPYCFVEFHEHR 59
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + +++ AT T S Q K +S V + ++ VFV
Sbjct: 60 HAAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSSSTVVSTQRSQDHFHVFV 112
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 113 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 172
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 173 WLGGRQIRTNW 183
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCA 331
+D T++VGNL VT+ + +LFSQ G + K+ R FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHA 61
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 62 AAALAAMNGRKIMGKEVKVNWATTPSSQK 90
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 149/281 (53%), Gaps = 6/281 (2%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F+ G + K+I + TG + Y F+EF A L
Sbjct: 9 RTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDT-TGN-DPYCFVEFYENRHAAAALA 66
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + ++ ++NWAS + +K+D + +FVGDL+ +++ ++ F A +
Sbjct: 67 AMNGRKILG--KDMKVNWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAF-APFGKI 123
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV-SGQ 260
A+VV D TG++KGYGF+ F ++ + A+ +MNG + R +R AT K +
Sbjct: 124 SDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKSN 183
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 320
+ + + + + + P+N TV+ G + S ++D+ +R+ FS +GQ++ +++ K
Sbjct: 184 NEGASSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGY 243
Query: 321 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
FV+F A A+ +NGT + G ++ WG+ ++ ++
Sbjct: 244 SFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRS 284
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 33/236 (13%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D+ T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 4 DEDQPRTLYVGNLSRDVTEALILQVFSQIGP-CKSCKMILD--TTGNDPYCFVEFYENRH 60
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ MNG + M++ A+ + Q D N+ VFVG
Sbjct: 61 AAAALAAMNGRKILGKDMKVNWASTPSS------------------QKKDTSNHFHVFVG 102
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L ++ + +R F+ +G++ ++ K GF+ F ++ AE A++ +NG
Sbjct: 103 DLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQW 162
Query: 343 LGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG 398
LGG+ IR +W + K + P N N G YE ++P + ++Y GG
Sbjct: 163 LGGRQIRTNWA---TRKPSAPKSN--NEGASSKHLSYEEV-LNQSSPSNCTVYCGG 212
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
+ P Q+ +++GDL + + FA G++ +V+R+ TG+ +GYGFI
Sbjct: 84 STPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGYGFI 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF----------GAGEKR--------DD 170
FI++ AE +Q NG + G + R NWA+ GA K
Sbjct: 144 SFINKWDAESAIQQMNGQWL--GGRQIRTNWATRKPSAPKSNNEGASSKHLSYEEVLNQS 201
Query: 171 TPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
+P + T++ G +A+ ++D ++++TF S G + I KGY FVRF
Sbjct: 202 SPSNCTVYCGGIASGLSDQLMRQTF-----SPFGQIMEIRVFP--EKGYSFVRFDSHEGA 254
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP 264
A+ +NG ++ + QQ P
Sbjct: 255 AHAIVSVNGTCIEGHTVKCYWGKETADMRSMQQMP 289
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 146/307 (47%), Gaps = 12/307 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F G + K+I + + Y F+EF A L
Sbjct: 8 KTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFFEHRDAAAALA 65
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAF-APFGKI 122
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K
Sbjct: 123 SDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSV 182
Query: 262 QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 321
Q A + P N TV+ G + S +T+ +R+ FS +GQ++ +++ K
Sbjct: 183 QDNSAKQLRFDEVVNQSSPQNCTVYCGGIQSGLTEHLMRQTFSPFGQIMEIRVFPEKGYS 242
Query: 322 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN--KQAQPDP----NQWNAGYYGY 375
F++F+ A A+ +NGT + G ++ WG+ + K QP QWN YG
Sbjct: 243 FIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMAKNVQPMEYGQWGQWNQ-MYGN 301
Query: 376 AQGYENY 382
Q Y Y
Sbjct: 302 PQQYGQY 308
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 27/191 (14%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D++ T++VG+L+ DVT+ ++ + F P K K++ + + Y FV F +
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQIGP-CKSCKMITEHTSNDP--YCFVEFFEHR 58
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
+ A+ MNG + + G++ K ++ + +Q D N+ VFV
Sbjct: 59 DAAAALAAMNG----------------RKILGKE--VKVNWATTPSSQKKDTSNHFHVFV 100
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T + +R F+ +G++ ++ K GFV F ++ AE A+ + G
Sbjct: 101 GDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQ 160
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 161 WLGGRQIRTNW 171
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 83 TTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFV 142
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 143 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSVQDNSAKQLRFDEVVNQSS 200
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T++++++TF P + +++ KGY F+RF
Sbjct: 201 PQNCTVYCGGIQSGLTEHLMRQTFS---PFGQ----IMEIRVFPEKGYSFIRFSSHESAA 253
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 254 HAIVSVNGT 262
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG----FVQFADRSCAE 332
+D+ + T++VGNL VT+ + +LF+Q G K+ FV+F + A
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAA 61
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQK 89
>gi|432906488|ref|XP_004077556.1| PREDICTED: nucleolysin TIAR-like [Oryzias latipes]
Length = 382
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 146/305 (47%), Gaps = 27/305 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F G + K+I + + Y F+EF A L
Sbjct: 8 RTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFFEHRDAAAALA 65
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL D++ ++ F +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLNPDISTEDVRAAFTP-FGKI 122
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------- 254
A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K
Sbjct: 123 SDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRTNWATRKPPAPKSL 182
Query: 255 -KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+VS Q ++ + Q+S P N TV+ G + S +++ +R+ FS +GQ++ ++
Sbjct: 183 QDSVSKQLRFEEVVTQSS--------PQNCTVYCGGIQSELSEHLMRQTFSPFGQIMEIR 234
Query: 314 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP------NQ 367
+ K F++F+ A A+ +NGT + G ++ WG+ ++ P Q
Sbjct: 235 VFPEKGYSFIRFSSHDSAAHAIVSVNGTSIEGHAVKCYWGKESTDMAKNPQQFEYSQWGQ 294
Query: 368 WNAGY 372
WN Y
Sbjct: 295 WNQVY 299
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 27/190 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D++ T++VG+L+ DVT+ ++ + F P K K++ + + Y FV F + +
Sbjct: 3 DESHPRTLYVGNLSRDVTEILILQLFTQIGP-CKSCKMITEHTS--NDPYCFVEFFEHRD 59
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ MNG + + G++ K ++ + +Q D N+ VFVG
Sbjct: 60 AAAALAAMNG----------------RKILGKE--VKVNWATTPSSQKKDTSNHFHVFVG 101
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L+ ++ E +R F+ +G++ ++ K GFV F ++ AE A+ + G
Sbjct: 102 DLNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQW 161
Query: 343 LGGQNIRLSW 352
LGG+ IR +W
Sbjct: 162 LGGRQIRTNW 171
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + F G++ +V+++ TG+ +GYGF+
Sbjct: 83 TTPSSQKKDTSNHFHVFVGDLNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGYGFV 142
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 143 SFYNKLDAENAIVHMAGQWL--GGRQIRTNWATRKPPAPKSLQDSVSKQLRFEEVVTQSS 200
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + ++++++++++TF P + +++ KGY F+RF
Sbjct: 201 PQNCTVYCGGIQSELSEHLMRQTFS---PFGQ----IMEIRVFPEKGYSFIRFSSHDSAA 253
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 254 HAIVSVNGT 262
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG----FVQFADRSCAE 332
DD+ + T++VGNL VT+ + +LF+Q G K+ FV+F + A
Sbjct: 2 DDESHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAA 61
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQK 89
>gi|326495674|dbj|BAJ85933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 91/139 (65%), Gaps = 8/139 (5%)
Query: 274 AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEE 333
SD D NN TV+VG LD V+++ LR+ F++YG + VKIP GK+CGFVQ+ +R+ AEE
Sbjct: 13 GHSDGDSNNRTVYVGGLDQNVSEDELRKSFAKYGDVASVKIPLGKQCGFVQYVNRTDAEE 72
Query: 334 ALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAG---YYGYAQGYENYGYAAAAPQ 390
AL+ LNG +G Q +RLSWGRSPS+KQ++ D YYG Y YGYA+ P
Sbjct: 73 ALQGLNGAVIGKQAVRLSWGRSPSHKQSRGDSGNRRNNNNMYYG-TPFYGGYGYASPVPH 131
Query: 391 DPSMY---YGGYPGYGNYQ 406
P+MY YG YP YGN Q
Sbjct: 132 -PNMYAPAYGAYPFYGNQQ 149
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 66 AGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY 125
+G + P G RT+++G L + E L FA G+V +VK+ KQ
Sbjct: 7 SGSSTPGHSDGDSNN-RTVYVGGLDQNVSEDELRKSFAKYGDVASVKIPLGKQC------ 59
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
GF+++++R AE LQ NG + G+Q RL+W
Sbjct: 60 GFVQYVNRTDAEEALQGLNGAVI--GKQAVRLSWG 92
>gi|189208127|ref|XP_001940397.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976490|gb|EDU43116.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 470
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 138/314 (43%), Gaps = 53/314 (16%)
Query: 76 GQPGEI----------RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-- 123
GQPG + R L++G L + E L F TG V +VK+I +K
Sbjct: 67 GQPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFN 126
Query: 124 ----GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFV 178
YGF+E+ AER + T NG + N E DT +H IFV
Sbjct: 127 SKGFNYGFVEYDDPGAAERGMATLNGRRIHNNE-----------------DTSNHFHIFV 169
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL+ +V D +L + F P ++ A+V+ D TGR++GYGFV F D ++ RA++ M+G
Sbjct: 170 GDLSNEVNDEVLLQAFSTFGPVSE-ARVMWDMKTGRSRGYGFVAFRDRADADRALSSMDG 228
Query: 239 VFCSTRPMRIGPATNK------------------KTVSGQQQYPKASYQNSQVAQSDDDP 280
+ +R +R A K T G +P Q+ + +
Sbjct: 229 EWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPA 288
Query: 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 340
TT +VGNL + L LF +G + + + + F++ A A+ LNG
Sbjct: 289 WQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNG 348
Query: 341 TQLGGQNIRLSWGR 354
+ G+ ++ SWG+
Sbjct: 349 YNVNGRPLKCSWGK 362
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 168/351 (47%), Gaps = 38/351 (10%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK--------------- 117
+ GQP RTL++G+L + E + F+ G + K+I +
Sbjct: 2 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSSRRVNSVGFSVL 58
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Q + Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 59 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 116
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 117 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 175
Query: 238 GVFCSTRPMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 295
G + R +R AT K S Q+ K V QS P N TV+ G + S +T
Sbjct: 176 GQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLT 233
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR- 354
D+ +R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 234 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 293
Query: 355 SPSNKQA--QPDPNQWNAGYYGYAQGYEN---YG-YAAAAPQDPSMYYGGY 399
SP + Q D +QW ++Q Y N YG Y A Q PS YG Y
Sbjct: 294 SPDMTKNFQQVDYSQWGQ----WSQVYGNPQQYGQYMANGWQVPS--YGMY 338
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 100 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 159
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 160 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 217
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 218 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 270
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 271 HAIVSVNGT 279
>gi|196009388|ref|XP_002114559.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
gi|190582621|gb|EDV22693.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
Length = 292
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 14/279 (5%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
+IG+L E + FA G + K+I + G + YGF+E+ + A R L N
Sbjct: 8 YIGNLDRQTTEQSIGELFAKFGAIKRCKLI--TEHGGNDPYGFVEYAEKNSAARALDAMN 65
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G G + ++NWA+ R DT + IFVGDL+ D+ +L+ F ++ A
Sbjct: 66 GYSF--GSRAIKVNWAT--NSSMRKDTNHYHIFVGDLSPDIDTTLLRSAFN-QFGHVSDA 120
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP 264
+VV D TG+ +GYGFV + + E AM MNG + R +R AT K + +Q
Sbjct: 121 RVVKDSATGKPRGYGFVSYQFKHEAENAMQSMNGAWLGGRNIRTNWATRKPGATTNRQNS 180
Query: 265 KASYQNSQVAQSDD-----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
+S +++ D+ N TV+VGNL + T+E LR +F +G + +++ K
Sbjct: 181 DSS--STKSLNYDEIYLQTAVYNCTVYVGNLSAGTTEETLRRIFIPFGPIADIRVFPDKN 238
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
F+++ A A+ +++GT + G ++ SWG+ ++
Sbjct: 239 YAFIRYMSHDHATNAIVVIHGTAVEGSQVKCSWGKEAND 277
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 30/176 (17%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL +D T L + F G V +V+++ TG+ GYGF+ + + AE +Q+
Sbjct: 93 IFVGDLSPDIDTTLLRSAFNQFGHVSDARVVKDSATGKPRGYGFVSYQFKHEAENAMQSM 152
Query: 144 NGTPMPNGEQNFRLNWASF--GAGEKRDDTP-------------------DHTIFVGDLA 182
NG + G +N R NWA+ GA R ++ + T++VG+L+
Sbjct: 153 NGAWL--GGRNIRTNWATRKPGATTNRQNSDSSSTKSLNYDEIYLQTAVYNCTVYVGNLS 210
Query: 183 ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
A T+ L+ F P + D K Y F+R+ A+ ++G
Sbjct: 211 AGTTEETLRRIFIPFGP-------IADIRVFPDKNYAFIRYMSHDHATNAIVVIHG 259
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR----CGFVQFADRSCAEEALRMLNGT 341
++GNLD T++ + ELF+++G + K+ GFV++A+++ A AL +NG
Sbjct: 8 YIGNLDRQTTEQSIGELFAKFGAIKRCKLITEHGGNDPYGFVEYAEKNSAARALDAMNGY 67
Query: 342 QLGGQNIRLSWGRSPSNKQAQPDPNQWN 369
G + I+++W +N + D N ++
Sbjct: 68 SFGSRAIKVNW---ATNSSMRKDTNHYH 92
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 156/323 (48%), Gaps = 18/323 (5%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++G+L + E + F+ G + K+I + + Y F+EF A L
Sbjct: 92 CYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAM 149
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKG 203
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 150 NGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISD 206
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQY 263
A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K Q
Sbjct: 207 ARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQE 266
Query: 264 PKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFV 323
+ + P N TV+ G + S +TD+ +R+ FS +GQ++ +++ K FV
Sbjct: 267 NNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFV 326
Query: 324 QFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWNAGYYGYAQGYE 380
+F+ A A+ +NGT + G ++ WG+ SP + Q D +QW ++Q Y
Sbjct: 327 RFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQ----WSQVYG 382
Query: 381 N---YG-YAAAAPQDPSMYYGGY 399
N YG Y A Q PS YG Y
Sbjct: 383 NPQQYGQYMANGWQVPS--YGMY 403
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 166 TPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVS 225
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDDT 171
F ++ AE + G + G + R NWA+ F +
Sbjct: 226 FYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSP 283
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
+ T++ G +A+ +TD ++++TF S G + I KGY FVRF
Sbjct: 284 KNCTVYCGGIASGLTDQLMRQTF-----SPFGQIMEIRVFP--EKGYSFVRFSTHESAAH 336
Query: 232 AMTEMNGV 239
A+ +NG
Sbjct: 337 AIVSVNGT 344
>gi|195117982|ref|XP_002003519.1| GI17961 [Drosophila mojavensis]
gi|193914094|gb|EDW12961.1| GI17961 [Drosophila mojavensis]
Length = 346
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYSLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
Y S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG V T+P++I A K
Sbjct: 124 YTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYVGLGTKPIKICNAVPK 180
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNT---TVFVGNLDS 292
+NG +P+ P TN P ++ + + S P N +V+VG+L S
Sbjct: 68 LNG-----KPI---PGTN----------PIVRFRLNSASNSYKLPGNEREFSVWVGDLSS 109
Query: 293 IVTDEHLRELF-SQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQLGG 345
V D L ++F S+Y + K+ K GFV+F + AL +NG LG
Sbjct: 110 DVDDYSLYKVFSSKYTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYVGLGT 169
Query: 346 QNIRL 350
+ I++
Sbjct: 170 KPIKI 174
>gi|58266842|ref|XP_570577.1| mRNA catabolism, nonsense-mediated-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134110468|ref|XP_776061.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258729|gb|EAL21414.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226810|gb|AAW43270.1| mRNA catabolism, nonsense-mediated-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 434
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 147/323 (45%), Gaps = 42/323 (13%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGF 127
+ P Q + + L++G+L + + L FA G VV+ K+I RN Q G YGF
Sbjct: 10 ITPGQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFN-YGF 68
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTD 187
+E+ A++ L T NG + + E R+NWA G K D + +FVGDL+ +V D
Sbjct: 69 VEYADMRSADQALTTLNGRKIFDAE--IRVNWAYQGNQNKEDTQHHYHVFVGDLSPEVND 126
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
+L + F A + S A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R
Sbjct: 127 DVLSKAFGA-FGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIR 185
Query: 248 IGPATNK--------------------KTVSGQQQYPKA----------------SYQNS 271
+ A K P A + +
Sbjct: 186 VNWANQKTQTGGTRTGGGTPSYPAPPMGAPPAPAGVPSAYGAPAPGVVPGVGVGGAVGSY 245
Query: 272 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 331
+ S NTTV+VGNL T L LF YG +V +++ A + FV+ A
Sbjct: 246 ETVASQTPEFNTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHQNA 305
Query: 332 EEALRMLNGTQLGGQNIRLSWGR 354
A+ L + G+ I+ SWG+
Sbjct: 306 ALAITHLQNQLVHGRPIKCSWGK 328
>gi|126273037|ref|XP_001367935.1| PREDICTED: nucleolysin TIAR isoform 3 [Monodelphis domestica]
Length = 385
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 171/354 (48%), Gaps = 47/354 (13%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 2 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 56
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP-------------DH-TIFV 178
A L NG + E ++NWA+ + +K+D + DH +FV
Sbjct: 57 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSSKYIVAITVHLRDQDHFHVFV 114
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G
Sbjct: 115 GDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGG 173
Query: 239 VFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDS 292
+ R +R AT K PK++ +NS +D P N TV+ G + S
Sbjct: 174 QWLGGRQIRTNWATRKPPA------PKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIAS 227
Query: 293 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352
+TD+ +R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ W
Sbjct: 228 GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYW 287
Query: 353 GR-SPSNKQA--QPDPNQWNAGYYGYAQGYEN---YG-YAAAAPQDPSMYYGGY 399
G+ SP + Q D +QW ++Q Y N YG Y A Q PS YG Y
Sbjct: 288 GKESPDMTKNFQQVDYSQWGQ----WSQVYGNPQQYGQYMANGWQVPS--YGMY 335
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 161/323 (49%), Gaps = 39/323 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ S D+ PNN TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSN 358
+GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ +P
Sbjct: 236 PFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ 295
Query: 359 KQAQ----PDPNQWNAGYYGYAQ 377
+Q Q P QW +YG AQ
Sbjct: 296 QQNQIGYPPTYGQWGQ-WYGNAQ 317
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 17/191 (8%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + +++ AT T S Q K +S V + ++ VFV
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSSSTVVSTQRSQDHFHVFV 110
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 111 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 170
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 171 WLGGRQIRTNW 181
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|195437766|ref|XP_002066811.1| GK24678 [Drosophila willistoni]
gi|194162896|gb|EDW77797.1| GK24678 [Drosophila willistoni]
Length = 357
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG + TRP++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTRPIKICNAVPK 180
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNT---TVFVGNLDS 292
+NG +P+ P TN P ++ + + S P N +V+VG+L S
Sbjct: 68 LNG-----KPI---PGTN----------PIVRFRLNSASNSYKLPGNEREFSVWVGDLSS 109
Query: 293 IVTDEHLRELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGG 345
V D L ++FS + +++ + K GFV+F + AL +NG LG
Sbjct: 110 DVDDYQLYKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGT 169
Query: 346 QNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGY 384
+ I++ A P P A G NYGY
Sbjct: 170 RPIKIC--------NAVPKPKAELAAALGMGGANSNYGY 200
>gi|385302688|gb|EIF46808.1| mrna binding post-transcriptional regulator [Dekkera bruxellensis
AWRI1499]
Length = 257
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 103/186 (55%), Gaps = 19/186 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTG-----EVVAVKVIRNKQTGQI----EGYGFIEFISRA 134
LW+G+L DE + +A + +VK+IR++Q Q+ GY F+ F +
Sbjct: 40 LWMGELDQRWDEITIRQIWAALLGPMGIXIHSVKLIRDRQXSQMGLSNAGYCFVRFYNXE 99
Query: 135 GAERVLQTFNGTPMPN--GEQNFRLNWASFGAGEK--------RDDTPDHTIFVGDLAAD 184
A +VL FN P+P G + FRLNW+S P+ +IFVGDL
Sbjct: 100 DASKVLTMFNXKPIPGSAGRRFFRLNWSSANIQAAAATSTXLPESAAPEFSIFVGDLPQG 159
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T+++L ETF ARYPS AKV+ID+ TGR +G+GFV+F +E+ RA+TEM R
Sbjct: 160 ITEHLLYETFHARYPSCASAKVMIDQNTGRVRGFGFVKFFXNAERQRALTEMQDYVLLGR 219
Query: 245 PMRIGP 250
P+R+ P
Sbjct: 220 PIRVSP 225
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 147/303 (48%), Gaps = 10/303 (3%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G + K+I + + Y F+EF A L N
Sbjct: 87 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMN 144
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A + A
Sbjct: 145 GRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISDA 201
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP 264
+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K Q
Sbjct: 202 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQEN 261
Query: 265 KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
+ + P N TV+ G + S +TD+ +R+ FS +GQ++ +++ K FV+
Sbjct: 262 NTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVR 321
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWN--AGYYGYAQGY 379
F+ A A+ +NGT + G ++ WG+ SP + Q D +QW + YG Q Y
Sbjct: 322 FSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQY 381
Query: 380 ENY 382
Y
Sbjct: 382 GQY 384
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 159 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 218
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 219 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 276
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF S G + I KGY FVRF
Sbjct: 277 PKNCTVYCGGIASGLTDQLMRQTF-----SPFGQIMEIRVFP--EKGYSFVRFSTHESAA 329
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 330 HAIVSVNGT 338
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 155/330 (46%), Gaps = 26/330 (7%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK--------------- 117
+ GQP RTL++G+L + E + F+ G + K+I +
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVL 59
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Q + Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 60 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 117
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 118 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 176
Query: 238 GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 297
G + R +R AT K Q + + P N TV+ G + S +TD+
Sbjct: 177 GQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQ 236
Query: 298 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SP 356
+R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP
Sbjct: 237 LMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESP 296
Query: 357 SNKQA--QPDPNQWN--AGYYGYAQGYENY 382
+ Q D +QW + YG Q Y Y
Sbjct: 297 DMTKNFQQVDYSQWGQWSQVYGNPQQYGQY 326
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 101 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 160
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 161 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSS 218
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 219 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 271
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 272 HAIVSVNGT 280
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 28/286 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L T F+ G V + K+IR + Y FIE+ S A+ L
Sbjct: 8 KTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASN---DPYAFIEYASHTSAQTALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
N E ++NWA+ + + DT H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRFFLKKE--IKVNWATSPGNQPKTDTSQHYHIFVGDLSPEIETETLREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
++V D T +++GY FV F ++E A+ MNG + +R +R +T K
Sbjct: 122 ISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRK------ 175
Query: 261 QQYPKASYQNSQVAQS-----------DDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQ 308
P A NS+ +S + P NTTV+ G + +TDE +++ F+Q+GQ
Sbjct: 176 ---PPAPRDNSKGIKSGKTPGFEEIYNNTSPTNTTVYCGGFPPNTITDELIQKHFAQFGQ 232
Query: 309 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ ++ K F++FA++ A A+ + +++ G ++ WG+
Sbjct: 233 IHDTRVFKDKGYAFIRFANKESAARAIEGTHNSEVQGHPVKCYWGK 278
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEALRMLNG 340
T++VGNLD+ VT+E L LFSQ G + KI + F+++A + A+ AL +N
Sbjct: 9 TLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASNDPYAFIEYASHTSAQTALAAMNK 68
Query: 341 TQLGGQNIRLSWGRSPSNKQAQPDPNQ 367
+ I+++W SP N Q + D +Q
Sbjct: 69 RFFLKKEIKVNWATSPGN-QPKTDTSQ 94
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 168/353 (47%), Gaps = 47/353 (13%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSN 358
+GQ++ +++ K FV+F A A+ +NGT + G ++ WG+ +P
Sbjct: 236 PFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ 295
Query: 359 KQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYY-GGY--PGYGNYQQP 408
+Q Q GY Q Y +G Q Y G+ P YG Y QP
Sbjct: 296 QQNQ----------IGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQP 338
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+D T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ MNG + +++ AT T S Q K +S V + ++ VFVG
Sbjct: 59 AAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSSSTVVSTQRSQDHFHVFVG 111
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 112 DLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 171
Query: 343 LGGQNIRLSW 352
LGG+ IR +W
Sbjct: 172 LGGRQIRTNW 181
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|194856103|ref|XP_001968677.1| GG24374 [Drosophila erecta]
gi|190660544|gb|EDV57736.1| GG24374 [Drosophila erecta]
Length = 336
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG + T+P++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 38/219 (17%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNT---TVFVGNLDS 292
+NG +P+ P TN P ++ + + S P N +V+VG+L S
Sbjct: 68 LNG-----KPI---PGTN----------PIVRFRLNSASNSYKLPGNEREFSVWVGDLSS 109
Query: 293 IVTDEHLRELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGG 345
V D L ++FS + +++ + K GFV+F + AL +NG LG
Sbjct: 110 DVDDYQLYKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGT 169
Query: 346 QNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGY 384
+ I++ N +P NA A G NYGY
Sbjct: 170 KPIKI------CNAVPKPKSELGNA----LADGNTNYGY 198
>gi|414875536|tpg|DAA52667.1| TPA: hypothetical protein ZEAMMB73_787505 [Zea mays]
Length = 448
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Query: 154 NFRLNWASFGAGEKRDDTP-DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLT 212
+F+L+ A+ DD+ DH+IF+G+LA DVT YML F+A YPS K AK++ D+ T
Sbjct: 340 DFKLDLATQQERHAADDSSSDHSIFIGNLAYDVTGYMLHHLFKAHYPSVKSAKIIFDKST 399
Query: 213 GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
G +K YGFV+FGD EQ++A+T+MNG +CSTRPMRIGP KK++
Sbjct: 400 GLSKCYGFVQFGDVDEQIQALTKMNGAYCSTRPMRIGPVPKKKSM 444
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 276 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQY------GQLVHVKIPAGKRC-GFVQFADR 328
+DD ++ ++F+GNL VT L LF + +++ K +C GFVQF D
Sbjct: 354 ADDSSSDHSIFIGNLAYDVTGYMLHHLFKAHYPSVKSAKIIFDKSTGLSKCYGFVQFGDV 413
Query: 329 SCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 364
+AL +NG + +R+ G P K P+
Sbjct: 414 DEQIQALTKMNGAYCSTRPMRI--GPVPKKKSMYPN 447
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 145/281 (51%), Gaps = 9/281 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G + K+I + + + Y F+EF+ A
Sbjct: 8 KTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSS--DPYCFVEFVDHKDAASARA 65
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T N + E ++NWA+ + +K+D + +FVGDL+ D+T ++ F A +
Sbjct: 66 TMNKRKILGKE--VKVNWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAF-APFGHI 122
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--KTVSG 259
A+V+ D TG++KGYGFV F ++ + A+++M G + R +R AT K S
Sbjct: 123 SDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKSF 182
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
Q K + V QS P+N TV+ G + S +T+ +++ FS +GQ++ +++ K
Sbjct: 183 QDNGSKHLKFDDIVTQSS--PHNCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPDKG 240
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
FV+F+ A A+ +NGT + G ++ WG+ + Q
Sbjct: 241 YSFVRFSSHDSAAHAIVSVNGTVIEGNLVKCFWGKESPDMQ 281
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 27/190 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+++ T++VG+L+ DVT+ ++ + F P K K++ D + + Y FV F D +
Sbjct: 3 EESLSKTLYVGNLSRDVTEILILQLFSQIGP-CKSCKMITDHTS--SDPYCFVEFVDHKD 59
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A M NK+ + G++ K ++ S Q D N+ VFVG
Sbjct: 60 AASARATM----------------NKRKILGKE--VKVNWATSPSCQKKDTSNHFHVFVG 101
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L +T E +R F+ +G + ++ K GFV F ++ AE A+ + G
Sbjct: 102 DLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQW 161
Query: 343 LGGQNIRLSW 352
L G+ IR +W
Sbjct: 162 LQGRQIRTNW 171
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG----FVQFADRSCAE 332
D++ + T++VGNL VT+ + +LFSQ G K+ FV+F D A
Sbjct: 2 DEESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAA 61
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPS 357
A +N ++ G+ ++++W SPS
Sbjct: 62 SARATMNKRKILGKEVKVNWATSPS 86
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 170/362 (46%), Gaps = 40/362 (11%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK--------------- 117
+ GQP RTL++G+L + E + F+ G + K+I +
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVL 59
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Q + Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 60 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 117
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 118 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 176
Query: 238 GVFCSTRPMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 295
G + R +R AT K S Q+ K V QS P N TV+ G + S +T
Sbjct: 177 GQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLT 234
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR- 354
D+ +R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 235 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 294
Query: 355 SPSNKQA--QPDPNQWNAGYYGYAQGY-ENYG-YAAAAPQDPSMYYGGYPGYGNYQQPQQ 410
SP + Q D +QW G +G G + YG Y A Q P YG Y QP
Sbjct: 295 SPDMTKNFQQVDYSQW--GQWGQVYGNPQQYGQYMANGWQ--------VPPYGVYGQPWN 344
Query: 411 PQ 412
Q
Sbjct: 345 QQ 346
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 101 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 160
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 161 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 218
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF S G + I KGY FVRF
Sbjct: 219 PKNCTVYCGGIASGLTDQLMRQTF-----SPFGQIMEIRVFP--EKGYSFVRFSTHESAA 271
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 272 HAIVSVNGT 280
>gi|115497910|ref|NP_001069577.1| nucleolysin TIA-1 isoform p40 [Bos taurus]
gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule-associated RNA binding protein [Bos taurus]
gi|296482421|tpg|DAA24536.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein [Bos
taurus]
Length = 384
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 169/357 (47%), Gaps = 47/357 (13%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSN 358
+GQ++ +++ K FV+F A A+ +NGT + G ++ WG+ +P
Sbjct: 236 PFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ 295
Query: 359 KQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYY-GGY--PGYGNYQQPQQPQ 412
+Q Q GY Q Y +G Q Y G+ P YG Y QP Q
Sbjct: 296 QQNQ----------IGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQPWNQQ 342
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+D T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ MNG + +++ AT T S Q K +S V + ++ VFVG
Sbjct: 59 AAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSSSTVVSTQRSQDHFHVFVG 111
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 112 DLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 171
Query: 343 LGGQNIRLSW 352
LGG+ IR +W
Sbjct: 172 LGGRQIRTNW 181
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|413916539|gb|AFW56471.1| hypothetical protein ZEAMMB73_945385 [Zea mays]
Length = 381
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Query: 154 NFRLNWASFGAGEKRDDTP-DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLT 212
+F+L+ A+ DD+ DH+IF+G+LA DVT YML F+A YPS K AK++ D+ T
Sbjct: 273 DFKLDLATQQERHAADDSSSDHSIFIGNLAYDVTGYMLHHLFKAHYPSVKSAKIIFDKST 332
Query: 213 GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
G +K YGFV+FGD EQ++A+T+MNG +CSTRPMRIGP KK++
Sbjct: 333 GLSKCYGFVQFGDVDEQIQALTKMNGAYCSTRPMRIGPVPKKKSM 377
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 276 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQY------GQLVHVKIPAGKRC-GFVQFADR 328
+DD ++ ++F+GNL VT L LF + +++ K +C GFVQF D
Sbjct: 287 ADDSSSDHSIFIGNLAYDVTGYMLHHLFKAHYPSVKSAKIIFDKSTGLSKCYGFVQFGDV 346
Query: 329 SCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 364
+AL +NG + +R+ G P K P+
Sbjct: 347 DEQIQALTKMNGAYCSTRPMRI--GPVPKKKSMYPN 380
>gi|299748443|ref|XP_001839126.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
gi|298407975|gb|EAU82695.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
Length = 808
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 107/218 (49%), Gaps = 46/218 (21%)
Query: 83 TLWIGDLQYWMDETYLN-TCFAHTGEVVAVKV-------IRNKQTGQIEGYGFIEFISRA 134
TLW GDL+ WMDE Y C + V +KV +Q GY F+ F S A
Sbjct: 92 TLWWGDLEVWMDEEYARQVCTLMGWDPVNIKVPHPAPDPATGQQPANNPGYCFLTFPSHA 151
Query: 135 GAERVLQTFN----GTPMPNGEQNFRLNWAS------------FGAGEKRDDTP------ 172
A VL N MPN + F LNWAS F G P
Sbjct: 152 HAAAVLAQINNAGKSVTMPNSSRPFVLNWASSVPASATGASASFSGGAYPSSAPQQPQYQ 211
Query: 173 -DHTIFVGDLAADVTDYMLQETFRA--------RYP-------STKGAKVVIDRLTGRTK 216
+++IFVGDLA + ++ L FR R P S K AK+++D +TG ++
Sbjct: 212 KEYSIFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKYIRPFLSCKSAKIMLDPVTGVSR 271
Query: 217 GYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
GYGFVRF DE++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 272 GYGFVRFTDEADQQRALIEMHGLYCLSRPMRISPATAK 309
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 276 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEAL 335
+ DP NTTVFVG L ++++E LR F+ +G + +VK+P GK CGFVQF ++ AE A+
Sbjct: 489 TSTDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAI 548
Query: 336 RMLNGTQLGGQNIRLSWGRS 355
+ G +GG IRLSWGRS
Sbjct: 549 EKMQGFPIGGSKIRLSWGRS 568
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K G F++F+ +A AER ++
Sbjct: 497 TVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCG------FVQFVRKADAERAIEK 550
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 551 MQGFPI--GGSKIRLSW 565
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 159/332 (47%), Gaps = 30/332 (9%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK--------------- 117
+ GQP RTL++G+L + E + F+ G + K+I +
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVL 59
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Q + Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 60 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 117
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 118 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 176
Query: 238 GVFCSTRPMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 295
G + R +R AT K S Q+ K V QS P N TV+ G + S +T
Sbjct: 177 GQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLT 234
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR- 354
D+ +R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 235 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 294
Query: 355 SPSNKQA--QPDPNQWN--AGYYGYAQGYENY 382
SP + Q D +QW + YG Q Y Y
Sbjct: 295 SPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQY 326
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 101 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 160
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 161 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 218
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 219 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 271
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 272 HAIVSVNGT 280
>gi|195471272|ref|XP_002087929.1| GE14719 [Drosophila yakuba]
gi|194174030|gb|EDW87641.1| GE14719 [Drosophila yakuba]
Length = 338
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG + T+P++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 45/238 (18%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNT---TVFVGNLDS 292
+NG +P+ P TN P ++ + + S P N +V+VG+L S
Sbjct: 68 LNG-----KPI---PGTN----------PIVRFRLNSASNSYKLPGNEREFSVWVGDLSS 109
Query: 293 IVTDEHLRELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGG 345
V D L ++FS + +++ + K GFV+F + AL +NG LG
Sbjct: 110 DVDDYQLYKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGT 169
Query: 346 QNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYA-------AAAPQDPSMYY 396
+ I++ N +P NA +G NYGY+ A + D S YY
Sbjct: 170 KPIKI------CNAVPKPKSELGNA----LGEGSTNYGYSGSGSGATAGSGTDYSQYY 217
>gi|403416664|emb|CCM03364.1| predicted protein [Fibroporia radiculosa]
Length = 948
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 112/217 (51%), Gaps = 45/217 (20%)
Query: 83 TLWIGDLQYWMDETYLN-TCFAHTGEVVAVKVIR---NKQTGQIE---GYGFIEFISRAG 135
TLW G+L+ WMDE Y C + V +KV R + TGQ GY F+ F S+A
Sbjct: 219 TLWWGELEPWMDEEYAKQVCNLMGWDPVNIKVPRPPPDTVTGQQANNPGYCFLTFPSQAH 278
Query: 136 AERVLQTFNGTP------MPNGEQNFRLNW-----------------ASFGAGEKRDDTP 172
A VL N + MPN + F LNW A+ G+
Sbjct: 279 AASVLSQINSSSNSPAMIMPNSSKPFSLNWTSSIPSPPVASALPGQTATLQTGQNPQYPK 338
Query: 173 DHTIFVGDLAADVTDYMLQETFRA--------RYP-------STKGAKVVIDRLTGRTKG 217
+++IFVGDLA +V++ L FR R P S K AK+++D +TG ++G
Sbjct: 339 EYSIFVGDLAPEVSNSDLVAVFRNPVLGLRNDREPRFIRPFLSCKSAKIMLDPVTGVSRG 398
Query: 218 YGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
YGFVRF DE++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 399 YGFVRFTDETDQQRALIEMHGLYCLSRPMRISPATAK 435
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 54/80 (67%)
Query: 276 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEAL 335
+ DP NTTVFVG L ++++E LR F+ +G + +VK+P GK CGFVQF + AE A+
Sbjct: 607 TSSDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKPDAERAI 666
Query: 336 RMLNGTQLGGQNIRLSWGRS 355
+ G +GG IRLSWGRS
Sbjct: 667 EKMQGFPIGGSRIRLSWGRS 686
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K GF++F+ + AER ++
Sbjct: 615 TVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHC------GFVQFVRKPDAERAIEK 668
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 669 MQGFPI--GGSRIRLSW 683
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 144/280 (51%), Gaps = 11/280 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F G + K+I + T + Y F+EF A +
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKILGKE--VKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAF-APFGKI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---KTVS 258
+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K KT +
Sbjct: 122 SDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTN 181
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
+ S+ + V QS P+N TV+ G + + +T++ +R+ FS +GQ++ +++ K
Sbjct: 182 ESSSSKQLSF-DEVVNQS--SPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEK 238
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
FV+F A A+ +NGT + G ++ WG+ ++
Sbjct: 239 GYSFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTD 278
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 28/198 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
DD T++VG+L+ DVT+ ++ E F P K K+++D T Y FV F +
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPC-KSCKMIVD--TAGHDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
+ MNG + + G++ K ++ + +Q D ++ VFVG
Sbjct: 59 ATATIAAMNG----------------RKILGKE--VKVNWATTPTSQKKDTSSHFHVFVG 100
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L +T + ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 101 DLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 160
Query: 343 LGGQNIRLSWG-RSPSNK 359
LGG+ IR +W R P+ K
Sbjct: 161 LGGRQIRTNWATRKPAPK 178
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + FA G++ +V+++ TG+ +GYGF+ F
Sbjct: 84 PTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSF 143
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDDTP 172
++ AE +Q G + G + R NWA SF +
Sbjct: 144 FNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPAPKTTNESSSSKQLSFDEVVNQSSPS 201
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G + +T+ ++++TF P + +++ KGY FVRF A
Sbjct: 202 NCTVYCGGVTTGLTEQIMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFNSHEAAAHA 254
Query: 233 MTEMNG 238
+ +NG
Sbjct: 255 IVSVNG 260
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
DD T++VGNL VT+ + ELF Q G K+ AG C FV+F + A
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYC-FVEFYEHRHAT 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
+ +NG ++ G+ ++++W +P++++
Sbjct: 61 ATIAAMNGRKILGKEVKVNWATTPTSQK 88
>gi|195576533|ref|XP_002078130.1| GD22708 [Drosophila simulans]
gi|194190139|gb|EDX03715.1| GD22708 [Drosophila simulans]
Length = 336
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG + T+P++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 42/235 (17%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNT---TVFVGNLDS 292
+NG +P+ P TN P ++ + + S P N +V+VG+L S
Sbjct: 68 LNG-----KPI---PGTN----------PIVRFRLNSASNSYKLPGNEREFSVWVGDLSS 109
Query: 293 IVTDEHLRELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGG 345
V D L ++FS + +++ + K GFV+F + AL +NG LG
Sbjct: 110 DVDDYQLYKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGT 169
Query: 346 QNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGY----AAAAPQDPSMYY 396
+ I++ A P P G G +G NYGY AA D S YY
Sbjct: 170 KPIKIC--------NAVPKPKSELGGAVG--EGSTNYGYGSGVTAAGGTDYSQYY 214
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 144/280 (51%), Gaps = 11/280 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F G + K+I + T + Y F+EF A +
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKILGKE--VKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAF-APFGKI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---KTVS 258
+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K KT S
Sbjct: 122 SDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTS 181
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
+ S+ + V QS P+N TV+ G + + +T++ +R+ FS +GQ++ +++ K
Sbjct: 182 ETTNTKQLSF-DEVVNQS--SPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEK 238
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
FV+F A A+ +NGT + G ++ WG+ ++
Sbjct: 239 GYSFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTD 278
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 28/205 (13%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
DD T++VG+L+ DVT+ ++ E F P K K+++D T Y FV F +
Sbjct: 2 DDDQPKTLYVGNLSRDVTEALILELFGQIGPC-KSCKMIVD--TAGHDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
+ MNG + + G++ K ++ + +Q D ++ VFVG
Sbjct: 59 ATATIAAMNG----------------RKILGKE--VKVNWATTPTSQKKDTSSHFHVFVG 100
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L +T + ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 101 DLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 160
Query: 343 LGGQNIRLSWG-RSPSNKQAQPDPN 366
LGG+ IR +W R P+ K N
Sbjct: 161 LGGRQIRTNWATRKPAPKTTSETTN 185
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + FA G++ +V+++ TG+ +GYGF+ F
Sbjct: 84 PTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSF 143
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDDTP 172
++ AE +Q G + G + R NWA SF +
Sbjct: 144 FNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPAPKTTSETTNTKQLSFDEVVNQSSPS 201
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G + +T+ ++++TF P + +++ KGY FVRF A
Sbjct: 202 NCTVYCGGVTTGLTEQIMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFNSHEAAAHA 254
Query: 233 MTEMNG 238
+ +NG
Sbjct: 255 IVSVNG 260
>gi|348507121|ref|XP_003441105.1| PREDICTED: nucleolysin TIAR [Oreochromis niloticus]
Length = 382
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 147/296 (49%), Gaps = 20/296 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F G + K+I + + Y F+EF A L
Sbjct: 8 RTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFFEHRDAAAALA 65
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL ++T ++ F A +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLNPEITTEDVRVAF-APFGKI 122
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ M+G + R +R AT K
Sbjct: 123 SDARVVKDMTTGKSKGYGFVSFYNKLDAENAIINMSGQWLGGRQIRTNWATRKPPA---- 178
Query: 262 QYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
PK++ N DD P N TV+ G + S +++ +R+ FS +GQ++ V++
Sbjct: 179 --PKSTQDNGSKQLRFDDVVNQSSPQNCTVYCGGIQSGLSEHLMRQTFSPFGQIMEVRVF 236
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQW 368
K F++F+ A A+ +NGT + G ++ WG+ SP ++ Q D +QW
Sbjct: 237 PEKGYSFIRFSSHDSAAHAIVSVNGTVIEGHVVKCFWGKESPDMAKSPQQVDYSQW 292
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 38/238 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D+T T++VG+L+ DVT+ ++ + F P K K++ + + Y FV F + +
Sbjct: 3 DETHPRTLYVGNLSRDVTEILILQLFTQIGP-CKSCKMITEHTS--NDPYCFVEFFEHRD 59
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ MNG + + G++ K ++ + +Q D N+ VFVG
Sbjct: 60 AAAALAAMNG----------------RKILGKE--VKVNWATTPSSQKKDTSNHFHVFVG 101
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L+ +T E +R F+ +G++ ++ K GFV F ++ AE A+ ++G
Sbjct: 102 DLNPEITTEDVRVAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIINMSGQW 161
Query: 343 LGGQNIRLSWG--RSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG 398
LGG+ IR +W + P+ K Q + G Q + ++PQ+ ++Y GG
Sbjct: 162 LGGRQIRTNWATRKPPAPKSTQDN---------GSKQLRFDDVVNQSSPQNCTVYCGG 210
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 86/189 (45%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 83 TTPSSQKKDTSNHFHVFVGDLNPEITTEDVRVAFAPFGKISDARVVKDMTTGKSKGYGFV 142
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF-----------GAGEKR-DDTPDH-- 174
F ++ AE + +G + G + R NWA+ G+ + R DD +
Sbjct: 143 SFYNKLDAENAIINMSGQWL--GGRQIRTNWATRKPPAPKSTQDNGSKQLRFDDVVNQSS 200
Query: 175 ----TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
T++ G + + ++++++++TF + + +V + KGY F+RF
Sbjct: 201 PQNCTVYCGGIQSGLSEHLMRQTF-SPFGQIMEVRVFPE------KGYSFIRFSSHDSAA 253
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 254 HAIVSVNGT 262
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG----FVQFADRSCAE 332
DD+ + T++VGNL VT+ + +LF+Q G K+ FV+F + A
Sbjct: 2 DDETHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAA 61
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQK 89
>gi|195159506|ref|XP_002020619.1| GL15405 [Drosophila persimilis]
gi|198475233|ref|XP_001356977.2| GA13731 [Drosophila pseudoobscura pseudoobscura]
gi|194117569|gb|EDW39612.1| GL15405 [Drosophila persimilis]
gi|198138730|gb|EAL34043.2| GA13731 [Drosophila pseudoobscura pseudoobscura]
Length = 339
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 105/178 (58%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKIFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG T+P++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGFIGLGTKPIKICNAVPK 180
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNT---TVFVGNLDS 292
+NG +P+ P TN P ++ + + S P N +V+VG+L S
Sbjct: 68 LNG-----KPI---PGTN----------PIVRFRLNSASNSYKLPGNEREFSVWVGDLSS 109
Query: 293 IVTDEHLRELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGG 345
V D L ++FS + +++ + K GFV+F + AL +NG LG
Sbjct: 110 DVDDYQLYKIFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGFIGLGT 169
Query: 346 QNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAA-------AAPQDPSMYY 396
+ I++ A P P G G NYGY+ AA D S YY
Sbjct: 170 KPIKIC--------NAVPKPKSELGAALG-VSGSTNYGYSGAGGTSSPAAGADYSQYY 218
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 158/318 (49%), Gaps = 18/318 (5%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQ 191
A L NG + E ++NWA+ + +K+ +H +FVGDL+ ++T ++
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIK 115
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R A
Sbjct: 116 SAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 174
Query: 252 TNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 309
T K S Q+ K V QS P N TV+ G + S +TD+ +R+ FS +GQ+
Sbjct: 175 TRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQTFSPFGQI 232
Query: 310 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPN 366
+ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +
Sbjct: 233 MEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYS 292
Query: 367 QWN--AGYYGYAQGYENY 382
QW + YG Q Y Y
Sbjct: 293 QWGQWSQVYGNPQQYGQY 310
>gi|195342467|ref|XP_002037822.1| GM18090 [Drosophila sechellia]
gi|194132672|gb|EDW54240.1| GM18090 [Drosophila sechellia]
Length = 336
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG + T+P++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 42/235 (17%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNT---TVFVGNLDS 292
+NG +P+ P TN P ++ + + S P N +V+VG+L S
Sbjct: 68 LNG-----KPI---PGTN----------PIVRFRLNSASNSYKLPGNEREFSVWVGDLSS 109
Query: 293 IVTDEHLRELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGG 345
V D L ++FS + +++ + K GFV+F + AL +NG LG
Sbjct: 110 DVDDYQLYKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGT 169
Query: 346 QNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGY----AAAAPQDPSMYY 396
+ I++ A P P G G +G NYGY AA D S YY
Sbjct: 170 KPIKIC--------NAVPKPKSELGGAVG--EGSTNYGYGSGVTAAGGTDYSQYY 214
>gi|28574707|ref|NP_608837.2| CG15440 [Drosophila melanogaster]
gi|19528537|gb|AAL90383.1| RE72132p [Drosophila melanogaster]
gi|28380262|gb|AAF51009.2| CG15440 [Drosophila melanogaster]
gi|220948848|gb|ACL86967.1| CG15440-PA [synthetic construct]
gi|220958268|gb|ACL91677.1| CG15440-PA [synthetic construct]
Length = 336
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG + T+P++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 42/235 (17%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNT---TVFVGNLDS 292
+NG +P+ P TN P ++ + + S P N +V+VG+L S
Sbjct: 68 LNG-----KPI---PGTN----------PIVRFRLNSASNSYKLPGNEREFSVWVGDLSS 109
Query: 293 IVTDEHLRELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGG 345
V D L ++FS + +++ + K GFV+F + AL +NG LG
Sbjct: 110 DVDDYQLYKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGT 169
Query: 346 QNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGY----AAAAPQDPSMYY 396
+ I++ A P P G G +G NYGY AA D S YY
Sbjct: 170 KPIKIC--------NAVPKPKSELGGAVG--EGNTNYGYGSGMTAAGGTDYSQYY 214
>gi|297738530|emb|CBI27775.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 148/287 (51%), Gaps = 29/287 (10%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L F+ TG + K+IR +++ YGF+++ R A +
Sbjct: 53 CRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSS----YGFVDYFDRRSAALSI 108
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L F YP
Sbjct: 109 VTLNGRHLFG--QPIKVNWAY--ASSQREDTSGHYNIFVGDLSPEVTDATLFACFSV-YP 163
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S A+V+ D+ TGR++G+GFV F ++ E A+ ++NG + +R +R AT K G
Sbjct: 164 SCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWLGSRQIRCNWAT--KGAGG 221
Query: 260 QQQYPKA-----------SYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFS 304
+ P + + ++ + +D+ P N TTV+VGNL VT L F
Sbjct: 222 NEDKPNSDAKSVVELTNGTSEDGKDKSNDEAPENNLQYTTVYVGNLAPEVTSVDLHRHFH 281
Query: 305 QY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 349
G + V++ K GFV+++ + A A++M N L G+ I+
Sbjct: 282 ALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILCGKPIK 328
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 46/219 (21%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + + L CF+ +V+ +++TG+ G+GF+ F ++ A+ +
Sbjct: 141 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDL 200
Query: 144 NGTPMPNGEQNFRLNWASFGAG--------------------------EKRDDTPDH--- 174
NG + G + R NWA+ GAG + D+ P++
Sbjct: 201 NGRWL--GSRQIRCNWATKGAGGNEDKPNSDAKSVVELTNGTSEDGKDKSNDEAPENNLQ 258
Query: 175 --TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
T++VG+LA +VT L F A GA + D R KG+GFVR+ +E A
Sbjct: 259 YTTVYVGNLAPEVTSVDLHRHFHAL-----GAGAIEDVRVQRDKGFGFVRYSTHAEAALA 313
Query: 233 MTEMNGVFCSTRPMRIG-PATNKKT-------VSGQQQY 263
+ N +P++ G P +KT + GQQ Y
Sbjct: 314 IQMGNARILCGKPIKKGCPRLRQKTTPSLYMVLMGQQTY 352
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +LQE F + P +G K++ YGFV + D
Sbjct: 49 DSSTCRSVYVGNIHPQVTEPLLQEVFSSTGP-LEGCKLI----RKEKSSYGFVDYFDRRS 103
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
++ +NG +P+++ A Y +SQ +D + +FVG
Sbjct: 104 AALSIVTLNGRHLFGQPIKVNWA----------------YASSQ---REDTSGHYNIFVG 144
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ G FV F ++ A+ A+ LNG
Sbjct: 145 DLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRW 204
Query: 343 LGGQNIRLSW 352
LG + IR +W
Sbjct: 205 LGSRQIRCNW 214
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 335
D +V+VGN+ VT+ L+E+FS G L K+ ++ GFV + DR A ++
Sbjct: 49 DSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSSYGFVDYFDRRSAALSI 108
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQ 360
LNG L GQ I+++W + S ++
Sbjct: 109 VTLNGRHLFGQPIKVNWAYASSQRE 133
>gi|392927018|ref|NP_509705.3| Protein TIAR-3 [Caenorhabditis elegans]
gi|211970450|emb|CAB01717.3| Protein TIAR-3 [Caenorhabditis elegans]
Length = 450
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 14/203 (6%)
Query: 166 EKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
E R DT H +FVGDL+ DV++ +L+ TF ++ AKV+ D T ++KGYGFV F
Sbjct: 216 EMRIDTSKHFHVFVGDLSKDVSNELLKSTF-TKFGEVSEAKVIRDVQTQKSKGYGFVSFP 274
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTT 284
++ A+ MNG + R +R A K + + + NS A +NT+
Sbjct: 275 NKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA------DNTS 328
Query: 285 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 344
V+VGN+ TD LR+LFS YG + V+I +R FV++ + CA +A+ +NG ++
Sbjct: 329 VYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMA 388
Query: 345 GQNIRLSWGRSPSNKQAQPDPNQ 367
G +R SWGR+ Q PNQ
Sbjct: 389 GNQVRCSWGRT------QAVPNQ 405
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 25/169 (14%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + L + F GEV KVIR+ QT + +GYGF+ F ++ AE +
Sbjct: 227 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 286
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDD-----------TPDHT-IFVGDLAADVTDYMLQ 191
NG + G++ R NWA+ E+ D D+T ++VG+++ TD L+
Sbjct: 287 NGKWI--GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLR 344
Query: 192 ETFRARYPSTKG--AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
+ F ST G A+V I +T+ Y FVR+ + +A+ EMNG
Sbjct: 345 DLF-----STYGDIAEVRI----FKTQRYAFVRYEKKECATKAIMEMNG 384
>gi|297725721|ref|NP_001175224.1| Os07g0516900 [Oryza sativa Japonica Group]
gi|255677810|dbj|BAH93952.1| Os07g0516900, partial [Oryza sativa Japonica Group]
Length = 92
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/84 (67%), Positives = 67/84 (79%)
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
LA+DVTD ML+E F+ YPS +GAKVV D++TGR+KGYGFVRFGDE+EQ RAMTEMNG
Sbjct: 1 LASDVTDSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGAT 60
Query: 241 CSTRPMRIGPATNKKTVSGQQQYP 264
STR MR+GPA NKK + QQ Y
Sbjct: 61 LSTRQMRLGPAANKKNMGTQQTYS 84
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 151/301 (50%), Gaps = 28/301 (9%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
+ E + F+ G K+I + T + Y F+EF A L NG + E
Sbjct: 1 VTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKE 58
Query: 153 QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLT 212
++NWA+ + +K+D + +FVGDL+ ++T ++ F A + A+VV D T
Sbjct: 59 --VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRISDARVVKDMAT 115
Query: 213 GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQ 272
G++KGYGFV F ++ + A+ +M G + R +R AT K PK++Y+++
Sbjct: 116 GKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA------PKSTYESNT 169
Query: 273 VAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 326
S D+ PNN TV+ G + S +T++ +R+ FS +GQ++ +++ K FV+F+
Sbjct: 170 KQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFS 229
Query: 327 DRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ----PDPNQWNAGYYGYA 376
A A+ +NGT + G ++ WG+ +P +Q Q P QW +YG A
Sbjct: 230 SHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQ-WYGNA 288
Query: 377 Q 377
Q
Sbjct: 289 Q 289
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 65 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 124
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 125 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSS 182
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 183 PNNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHESAA 235
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 236 HAIVSVNGT 244
>gi|410922589|ref|XP_003974765.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 386
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 140/279 (50%), Gaps = 17/279 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F G + K+I + T + Y F+EF A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVD--TAGNDPYCFVEFYEHRHAAASLA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ +K+D + +FVGDL+ ++T ++ F +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAF-GPFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---- 177
Query: 262 QYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
PK +Y+++ DD P+N TV+ G + + +T++ +R+ FS +G ++ +++
Sbjct: 178 --PKTTYESNSKQLCFDDVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVF 235
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
K FV+F A A+ +NG+ + G ++ WG+
Sbjct: 236 PDKGYSFVRFNSHESAAHAIVSVNGSSIEGHVVKCYWGK 274
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
DD P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDDQP-RTLYVGNLSRDVTEPLILQVFTQIGPC-KSCKMIVD--TAGNDPYCFVEFYEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
++ MNG + + G++ K ++ + +Q D N+ VFV
Sbjct: 58 HAAASLAAMNG----------------RKIMGKE--VKVNWATTPTSQKKDTSNHFHVFV 99
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T + ++ F +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 100 GDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 159
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 160 WLGGRQIRTNW 170
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + F G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA---------SFGAGEKR---DDTPDH-- 174
F ++ AE +Q G + G + R NWA ++ + K+ DD +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKTTYESNSKQLCFDDVVNQSS 199
Query: 175 ----TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
T++ G ++ +T+ ++++TF P +++ KGY FVRF
Sbjct: 200 PSNCTVYCGGVSTGLTEQLMRQTFSPFGP-------IMEIRVFPDKGYSFVRFNSHESAA 252
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 253 HAIVSVNG 260
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCA 331
DD P T++VGNL VT+ + ++F+Q G K+ AG C FV+F + A
Sbjct: 3 DDQPR--TLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYC-FVEFYEHRHA 59
Query: 332 EEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
+L +NG ++ G+ ++++W +P++++
Sbjct: 60 AASLAAMNGRKIMGKEVKVNWATTPTSQK 88
>gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xenopus (Silurana) tropicalis]
Length = 389
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 165/349 (47%), Gaps = 34/349 (9%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG-------- 124
+ GQP RTL++G+L + E + F+ G + K+I + + G
Sbjct: 2 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDSRRVGASVSFPVL 58
Query: 125 -------YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 59 PNTNNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 116
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 117 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 175
Query: 238 GVFCSTRPMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 295
G + R +R AT K S Q+ K V QS P N TV+ G + S +T
Sbjct: 176 GQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIGSGLT 233
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
++ +R+ F +GQ++ +++ K F++F+ A A+ +NGT + G ++ WG+
Sbjct: 234 EQLMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWGKE 293
Query: 356 P---SNKQAQPDPNQWNAGYYGYAQGY-ENYG-YAAAAPQDPSMYYGGY 399
+ Q D +QW G +G G + YG Y A Q PS YG Y
Sbjct: 294 TPDMTKNFQQVDYSQW--GQWGQMYGSPQQYGQYVANGWQVPS--YGMY 338
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 100 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 159
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 160 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 217
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF +++ KGY F+RF
Sbjct: 218 PKNCTVYCGGIGSGLTEQLMRQTFGV-------FGQILEIRVFPEKGYSFIRFSTHDSAA 270
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 271 HAIVSVNG 278
>gi|390359470|ref|XP_782936.3| PREDICTED: nucleolysin TIAR-like [Strongylocentrotus purpuratus]
Length = 430
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 141/280 (50%), Gaps = 16/280 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTG--EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
RTL++G+L + E + F + + K+I + G + Y F+EF AE
Sbjct: 25 RTLYVGNLDRRVTEELVFQLFLQIAPSKTKSCKMIADH--GNSDPYCFVEFYDSVTAEAA 82
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+ NG + ++ ++NWA+ G ++D T H +FVGDL ++ L+ F +Y
Sbjct: 83 MVAMNGRTV--FDKPIKVNWAT-TQGSRKDTTHHHHVFVGDLVQEMKTAELRALFD-KYG 138
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP----MRIGPATNKK 255
S A+VV D TG+++ YGFV F E + A+ EMNG P +R G AT K
Sbjct: 139 SITDARVVRDPETGKSRCYGFVSFEQEEDAQCAIKEMNGAILPQYPGMKAIRTGWATRKP 198
Query: 256 TVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKI 314
T + P+ ++ + ++ PNN TV+VG L ++ LR++F +G + V+
Sbjct: 199 T---SHKPPQIEAKDYERVLNETSPNNCTVYVGGLQFKFSAEDLLRKVFGPFGAIQEVRT 255
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
K FV+FA+ A A+ ++G+ + G ++ SWG+
Sbjct: 256 FPEKAFAFVRFANHESATNAIVSVHGSPIEGHVVKCSWGK 295
>gi|395329881|gb|EJF62266.1| hypothetical protein DICSQDRAFT_135856 [Dichomitus squalens
LYAD-421 SS1]
Length = 973
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 135/270 (50%), Gaps = 65/270 (24%)
Query: 31 QQPPPQ--PSPYMMMMPP-QPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIG 87
Q+P PQ SP + +PP QPQ+ P AT ++P+ TLW G
Sbjct: 195 QRPHPQQSSSPLSVQLPPAQPQSLPSPSTAT--SSPRT-----------------TLWWG 235
Query: 88 DLQYWMDETYLN-TCFAHTGEVVAVKVIR---NKQTGQIE---GYGFIEFISRAGAERVL 140
+L+ WMDE Y C + +++KV R + TGQ GY F+ F ++A A VL
Sbjct: 236 ELEPWMDEEYAKQVCNLMGWDPISIKVPRPAPDPITGQQANNPGYCFLTFSTQAQAASVL 295
Query: 141 QTFNGTP----MPNGEQNFRLNWAS-FGAGEKRDDTP----------------DHTIFVG 179
N + MPN + F LNWAS + P +++IFVG
Sbjct: 296 SQVNNSSSPMIMPNSSKPFSLNWASSIPSAPLSTSIPGQTISIPGVQNPQYPKEYSIFVG 355
Query: 180 DLAADVTDYMLQETFRA--------RYP-------STKGAKVVIDRLTGRTKGYGFVRFG 224
DLA +V++ L FR R P S K AK+++D +TG ++GYGFVRF
Sbjct: 356 DLAPEVSNSDLVAVFRNPVLGLRNDREPRFIRPFLSCKSAKIMLDPVTGVSRGYGFVRFT 415
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
DE++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 416 DEADQQRALIEMHGLYCLSRPMRISPATAK 445
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 55/80 (68%)
Query: 276 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEAL 335
+ DP NTTVFVG L +++++ LR F+ +G++ +VK+P GK CGFVQF + AE A+
Sbjct: 621 TSSDPYNTTVFVGGLSPLISEDTLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 680
Query: 336 RMLNGTQLGGQNIRLSWGRS 355
+ G +GG IRLSWGRS
Sbjct: 681 EKMQGFPIGGSRIRLSWGRS 700
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA GE+ VKV K GF++F+ + AER ++
Sbjct: 629 TVFVGGLSPLISEDTLRTFFAPFGEIHYVKVPVGKHC------GFVQFVRKPDAERAIEK 682
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 683 MQGFPI--GGSRIRLSW 697
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 168/353 (47%), Gaps = 47/353 (13%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSN 358
+GQ++ +++ K FV+F A A+ +NGT + G ++ WG+ +P
Sbjct: 236 PFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ 295
Query: 359 KQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYY-GGY--PGYGNYQQP 408
+Q Q GY Q Y +G Q Y G+ P YG Y QP
Sbjct: 296 QQNQ----------IGYPQPYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQP 338
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 17/191 (8%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + +++ AT T S Q K +S V + ++ VFV
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSSSTVVSTQRSQDHFHVFV 110
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 111 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 170
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 171 WLGGRQIRTNW 181
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|22208507|gb|AAM94322.1| putative oligouridylate binding protein [Sorghum bicolor]
Length = 581
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 141/282 (50%), Gaps = 23/282 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + +T L F G V K+IR +++ +GFI++ R A +
Sbjct: 67 RSVYVGNISLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYAALAIL 122
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
+ NG P+ Q ++NWA +R+DT H IFVGDL +VTD L F Y +
Sbjct: 123 SLNGRPLYG--QPIKVNWAY--TSTQREDTSGHFNIFVGDLCPEVTDATLFAFFSG-YST 177
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A+V+ D+ TGR++G+GFV F ++ + A+ ++NG + R +R AT +
Sbjct: 178 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGEE 237
Query: 261 QQY--PKASYQNSQVAQSDDDPNN---------TTVFVGNLDSIVTDEHLRELFSQY--G 307
+Q K N ++PN TTV+VGNL T+ + F G
Sbjct: 238 KQIVDSKVDLTNGTSESGKENPNEDGPESNPQFTTVYVGNLPHEATNNDVHLFFHSLGAG 297
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 349
+ V++ K GFV+++ A +A++M NG +GG+ I+
Sbjct: 298 SIEEVRVTRDKGFGFVRYSTHEEAAQAIQMANGQLIGGRQIK 339
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 30/196 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG+++ VTD +LQE F++ P +G K++ +GF+ + D
Sbjct: 62 DSSTCRSVYVGNISLQVTDTVLQEVFQSIGP-VEGCKLI----RKEKSSFGFIDYYDRRY 116
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG RP+ GQ +Y ++Q +D + +FVG
Sbjct: 117 AALAILSLNG-----RPLY-----------GQPIKVNWAYTSTQ---REDTSGHFNIFVG 157
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ G FV F ++ A+ A+ LNG
Sbjct: 158 DLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKW 217
Query: 343 LGGQNIRLSWGRSPSN 358
LG + IR +W +N
Sbjct: 218 LGNRQIRCNWATKGAN 233
>gi|268533576|ref|XP_002631916.1| Hypothetical protein CBG07904 [Caenorhabditis briggsae]
Length = 411
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 141/290 (48%), Gaps = 27/290 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + + +L T F G V KV + G + + FIEF A + LQ
Sbjct: 37 RTLFVGNLDPAITDEFLATLFNQIGAVTKAKVCFD---GMNDPFAFIEFGDHNQAGQALQ 93
Query: 142 TFNGTPMPNGEQNFRLNWASF----GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG + + E R+NWA G K++ + +FVGDL+++V L+E F A
Sbjct: 94 AMNGRSLLDRE--MRVNWAVDASQPGDSRKQETSRHFHVFVGDLSSEVDSTKLREAFLA- 150
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--- 254
+ AK++ D T + KGYGFV + + RA+ +MNG + R +R AT K
Sbjct: 151 FGDVSEAKIIRDTATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWATRKPEE 210
Query: 255 ---------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQ 305
++ Y K + +D NT+V+VG ++ + DE +R F +
Sbjct: 211 EGGGERRDRGERGERRHYEKTFDEIYNQTSAD----NTSVYVGQINQLTEDE-IRRAFDR 265
Query: 306 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
+G + V++ + FV+F + A A+ +N ++ GQ +R SWG+S
Sbjct: 266 FGPINEVRMFKVQGYAFVKFEQKEAAARAIVQMNNAEIQGQQVRCSWGKS 315
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 44/195 (22%)
Query: 77 QPGEIRT--------LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
QPG+ R +++GDL +D T L F G+V K+IR+ T + +GYGF+
Sbjct: 115 QPGDSRKQETSRHFHVFVGDLSSEVDSTKLREAFLAFGDVSEAKIIRDTATNKAKGYGFV 174
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA--------------------------SF 162
+ R AER ++ NG + G + R NWA +F
Sbjct: 175 SYPRREDAERAIEQMNGQWL--GRRTIRTNWATRKPEEEGGGERRDRGERGERRHYEKTF 232
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
+ + +++VG + +T+ ++ F R+ ++ + +GY FV+
Sbjct: 233 DEIYNQTSADNTSVYVGQI-NQLTEDEIRRAF-DRFGPINEVRMF------KVQGYAFVK 284
Query: 223 FGDESEQLRAMTEMN 237
F + RA+ +MN
Sbjct: 285 FEQKEAAARAIVQMN 299
>gi|154269845|ref|XP_001535826.1| hypothetical protein HCAG_09244 [Ajellomyces capsulatus NAm1]
gi|150409464|gb|EDN04912.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 387
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 125/263 (47%), Gaps = 23/263 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L+IG L + E L F TG V +VK+I +K + + YGF+E+ AER +
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLN-YGFVEYDDPGAAERAMS 150
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 151 TLNGRRVHQSE--IRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 207
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F + + +A++ M+G + +R +R A K
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P Q+ + + TT +VGNL T L L
Sbjct: 268 QQQAMAAMGMTPSTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPL 327
Query: 303 FSQYGQLVHVKIPAGKRCGFVQF 325
F +G +V + + FV+
Sbjct: 328 FQNFGYVVETRFQTDRGFRFVKM 350
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 29/198 (14%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L A VT+ +L++ F + K++ D+ + YGFV + D RAM+
Sbjct: 94 LYIGGLDARVTEDILRQIFETT-GHVQSVKIIPDK-NSKGLNYGFVEYDDPGAAERAMST 151
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 295
+NG +R+ A YQ S +D N+ +FVG+L + V
Sbjct: 152 LNGRRVHQSEIRVNWA----------------YQ-SNNNNKEDTSNHFHIFVGDLSNEVN 194
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 349
DE L + FS +G + ++ + G FV F +R AE+AL ++G LG + IR
Sbjct: 195 DEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIR 254
Query: 350 LSWGRSPSNKQAQPDPNQ 367
+W +N++ QP +Q
Sbjct: 255 CNW----ANQKGQPSISQ 268
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-----PAGKRCGFVQFADRSCAEE 333
+PN +++G LD+ VT++ LR++F G + VKI G GFV++ D AE
Sbjct: 88 EPNKRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAER 147
Query: 334 ALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG----------YAQGYENYG 383
A+ LNG ++ IR++W +N + N ++ + G Q + +G
Sbjct: 148 AMSTLNGRRVHQSEIRVNWAYQSNNNNKEDTSNHFHI-FVGDLSNEVNDEVLLQAFSAFG 206
Query: 384 YAAAAPQDPSMYYGGYPGYG 403
+ A M G GYG
Sbjct: 207 SVSEARVMWDMKTGRSRGYG 226
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 151/305 (49%), Gaps = 14/305 (4%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G + K+I + + Y F+EF A L N
Sbjct: 3 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMN 60
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A + A
Sbjct: 61 GRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISDA 117
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--KTVSGQQQ 262
+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K S Q+
Sbjct: 118 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQEN 177
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGF 322
K V QS P N TV+ G + S +TD+ +R+ FS +GQ++ +++ K F
Sbjct: 178 NTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSF 235
Query: 323 VQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWN--AGYYGYAQ 377
V+F+ A A+ +NGT + G ++ WG+ SP + Q D +QW + YG Q
Sbjct: 236 VRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQ 295
Query: 378 GYENY 382
Y Y
Sbjct: 296 QYGQY 300
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 75 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 134
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 135 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 192
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 193 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 245
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 246 HAIVSVNGT 254
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 157/318 (49%), Gaps = 16/318 (5%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P GQP + + ++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 103 PLHTGQPQD--SGYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFY 158
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQ 191
A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++
Sbjct: 159 EHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 216
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R A
Sbjct: 217 SAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 275
Query: 252 TNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 309
T K S Q+ K V QS P N TV+ G + S +TD+ +R+ FS +GQ+
Sbjct: 276 TRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQTFSPFGQI 333
Query: 310 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPN 366
+ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +
Sbjct: 334 MEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYS 393
Query: 367 QWN--AGYYGYAQGYENY 382
QW + YG Q Y Y
Sbjct: 394 QWGQWSQVYGNPQQYGQY 411
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 186 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 245
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 246 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 303
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF + + +V + KGY FVRF
Sbjct: 304 PKNCTVYCGGIASGLTDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAA 356
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 357 HAIVSVNGT 365
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 141/278 (50%), Gaps = 11/278 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E ++ T F GEV K+IR + Y F+EF S A L
Sbjct: 8 KTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGN---DPYAFLEFTSHTAAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPS 200
N + + E ++NWA+ + + DT +H IFVGDL+ ++ ++L++ F A +
Sbjct: 65 AMNKRVVLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---KTV 257
++V D T ++KGY FV F +++ A+ MNG + +R +R +T K K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPN 181
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDS-IVTDEHLRELFSQYGQLVHVKIPA 316
G +A + P NTTV+ G S ++T++ ++ FSQ+GQ+ V++
Sbjct: 182 EGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFR 241
Query: 317 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
K F++F + A A+ + T++ G ++ WG+
Sbjct: 242 DKGYAFIRFTTKEAAAHAIEATHNTEISGHIVKCFWGK 279
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 334
D+ + T++VGNLD+ VT+ + LF Q G++ KI P F++F + A A
Sbjct: 3 DESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAATA 62
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNK 359
L +N + + ++++W SP N+
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 154/316 (48%), Gaps = 33/316 (10%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G K+I + T + Y F+EF A L N
Sbjct: 50 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAASALAAMN 107
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYMLQET 193
G + E ++NWA+ + +K+D + DH +FVGDL+ ++T ++
Sbjct: 108 GRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQASQDHFHVFVGDLSPEITTEDIKAA 165
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT
Sbjct: 166 F-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 224
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYG 307
K PK++Y+++ S DD P+N TV+ G + S +T++ +R+ FS +G
Sbjct: 225 KPPA------PKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 278
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 367
Q++ +++ K FV+F A A+ +NGT + G ++ WG+ + + NQ
Sbjct: 279 QIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMVSPVQQNQ 338
Query: 368 WNAGYYGYAQGYENYG 383
GY Q Y +G
Sbjct: 339 -----IGYPQAYGQWG 349
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + + FA G + +V+++ TG+ +GYGF+ F ++ AE +Q
Sbjct: 148 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 207
Query: 144 NGTPMPNGEQNFRLNWA---------SFGAGEKR---DDTPDH------TIFVGDLAADV 185
G + G + R NWA ++ + K+ DD + T++ G + + +
Sbjct: 208 GGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGL 265
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
T+ ++++TF + + +V D KGY FVRF A+ +NG
Sbjct: 266 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 311
>gi|426253188|ref|XP_004020282.1| PREDICTED: nucleolysin TIAR isoform 3 [Ovis aries]
Length = 385
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 159/328 (48%), Gaps = 28/328 (8%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 2 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 56
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-----------TIFVGDL 181
A L NG + E ++NWA+ + +K+D + + +FVGDL
Sbjct: 57 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSSKYFCCILRKSYHFHVFVGDL 114
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G +
Sbjct: 115 SPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 173
Query: 242 STRPMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 299
R +R AT K S Q+ K V QS P N TV+ G + S +TD+ +
Sbjct: 174 GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLM 231
Query: 300 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSN 358
R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP
Sbjct: 232 RQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDM 291
Query: 359 KQA--QPDPNQWN--AGYYGYAQGYENY 382
+ Q D +QW + YG Q Y Y
Sbjct: 292 TKNFQQVDYSQWGQWSQVYGNPQQYGQY 319
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 165/347 (47%), Gaps = 34/347 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+ + S D+ P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYELNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 364
+GQ++ +++ K F++F A A+ +NGT + G ++ WG+ + +
Sbjct: 236 PFGQILEIRVFPDKGYSFIRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLD---MIN 292
Query: 365 PNQWNAGYYGYAQGYENYGYAAAAPQDPSMYY-GGY--PGYGNYQQP 408
P Q GY Y +G Q Y G+ P YG Y QP
Sbjct: 293 PVQQQQNQIGYPPAYGQWGQWYGNAQQIGQYVPNGWQVPAYGMYGQP 339
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 17/191 (8%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + +++ AT T S Q K +S V + ++ VFV
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSSSTVVSTQRSQDHFHVFV 110
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 111 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 170
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 171 WLGGRQIRTNW 181
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|294658145|ref|XP_002770728.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
gi|202952907|emb|CAR66259.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
Length = 747
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 125/232 (53%), Gaps = 33/232 (14%)
Query: 64 QAAGVAVPPQQ---QGQPGEIRTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIR---- 115
Q + VA +Q GQP RTLW+GDL W+DE ++ + + V VK+I+
Sbjct: 88 QQSSVAAEKEQGSNTGQPDSPRTLWMGDLDPWLDEGAISDLWWQILHKKVTVKIIKPKTP 147
Query: 116 ----NKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMP---------------NGEQNFR 156
N Q GY F+EF S A++ L NG +P N ++ FR
Sbjct: 148 KPENNAQGLSHSGYCFVEFESFDDAQQAL-GLNGQLLPDIAMPSQQQFPNNPDNQKKYFR 206
Query: 157 LNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTG 213
LNWAS GA TP++++FVGDL+A T+ L F+ +P S K +V+ D ++G
Sbjct: 207 LNWAS-GATLSAPIVQTPEYSLFVGDLSASTTEAHLLAFFQKSFPTSIKTVRVMTDPVSG 265
Query: 214 RTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPK 265
+++ +GFVRF DESE+ RA+ EM+G + RP+R+ AT + V G+ +YP
Sbjct: 266 KSRCFGFVRFTDESERQRALVEMHGAWFGGRPLRVALAT-PRNVGGKLRYPN 316
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 61/100 (61%)
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 320
+Q + Q Q Q DPNNTTVFVG L S VT++ L LF +G + VKIP GK C
Sbjct: 401 EQLRSPNLQGGQHGQPFTDPNNTTVFVGGLSSEVTEQTLFTLFKPFGIIQQVKIPPGKNC 460
Query: 321 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
GF++++ R AEEA+ + G +GG +RLSWGR N +
Sbjct: 461 GFIKYSSREEAEEAIAAMQGFIIGGNRVRLSWGRVSMNNK 500
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQ-------YGQLVHVKIPAGKRC-GFVQFADRSCAEEAL 335
++FVG+L + T+ HL F + +++ + RC GFV+F D S + AL
Sbjct: 226 SLFVGDLSASTTEAHLLAFFQKSFPTSIKTVRVMTDPVSGKSRCFGFVRFTDESERQRAL 285
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQAQ------PDPNQWN 369
++G GG+ +R++ +P N + P PN +N
Sbjct: 286 VEMHGAWFGGRPLRVALA-TPRNVGGKLRYPNIPSPNFYN 324
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 162/323 (50%), Gaps = 39/323 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSN 358
+GQ++ +++ K FV+F A A+ +NGT + G ++ WG+ +P
Sbjct: 236 PFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ 295
Query: 359 KQAQ---PDP-NQWNAGYYGYAQ 377
+Q+Q P P QW +YG AQ
Sbjct: 296 QQSQIGYPQPYGQWGQ-WYGNAQ 317
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 17/191 (8%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + +++ AT T S Q K +S V + ++ VFV
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSSSTVVSTQRSQDHFHVFV 110
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 111 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 170
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 171 WLGGRQIRTNW 181
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|115486297|ref|NP_001068292.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|77551976|gb|ABA94773.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645514|dbj|BAF28655.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|215767783|dbj|BAH00012.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186124|gb|EEC68551.1| hypothetical protein OsI_36864 [Oryza sativa Indica Group]
gi|222616351|gb|EEE52483.1| hypothetical protein OsJ_34666 [Oryza sativa Japonica Group]
Length = 441
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 146/292 (50%), Gaps = 25/292 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + ++ L+ F G V K+IR +++ +GF+++ R A +
Sbjct: 79 RSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSS----FGFVDYYDRRSAAIAIV 134
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + Q ++NWA A +R+DT H IFVGDL +VTD L A + S
Sbjct: 135 SLNGRQLFG--QPIKVNWAY--ASTQREDTSGHFNIFVGDLCPEVTDAALFAF-FAGFTS 189
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A+V+ D+ TGR++G+GFV F ++ + A+ E+NG + R +R AT +
Sbjct: 190 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCNWATKGANAGEE 249
Query: 261 QQ---------YPKASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY- 306
+Q S + + ++D P N TTV+VGNL V + F
Sbjct: 250 KQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSNDVHRFFHSLG 309
Query: 307 -GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G + V++ K GFV+++ A A++ NG +GG+ I+ SWG P+
Sbjct: 310 VGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKCSWGSKPT 361
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +L E F++ P +G K++ +GFV + D
Sbjct: 74 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGP-VEGCKLI----RKEKSSFGFVDYYDRRS 128
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG +P+++ + AS Q +D + +FVG
Sbjct: 129 AAIAIVSLNGRQLFGQPIKV-------------NWAYAS------TQREDTSGHFNIFVG 169
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L VTD L F+ + ++ ++ G FV F ++ A+ A+ LNG
Sbjct: 170 DLCPEVTDAALFAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKW 229
Query: 343 LGGQNIRLSWGRSPSN 358
LG + +R +W +N
Sbjct: 230 LGNRQVRCNWATKGAN 245
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 335
D +V+VGN+ VTD L E+F G + K+ ++ GFV + DR A A+
Sbjct: 74 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDRRSAAIAI 133
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQ 360
LNG QL GQ I+++W + + ++
Sbjct: 134 VSLNGRQLFGQPIKVNWAYASTQRE 158
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 140/318 (44%), Gaps = 53/318 (16%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + + L FA G VV K+I RN Q YGF+E+I AE+ +Q
Sbjct: 26 LYVGNLSPRVTDYMLTEIFAVAGPVVNAKIIQDRNFQHAGFN-YGFVEYIDMRSAEQAIQ 84
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
T NG + + E QN K D H +FVGDL+ +V D +L + F A +
Sbjct: 85 TLNGRKIFDAEVKQN------------KEDTQHHHHVFVGDLSPEVNDDVLAKAFGA-FG 131
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S A+V+ D +G+++GYGF+ F + +A+ MNG + +R +R+ A K
Sbjct: 132 SMSEARVMWDMNSGKSRGYGFLSFRKREDAEQAINTMNGEWLGSRAIRVNWANQKTQTGS 191
Query: 260 QQQYPKASY------QNSQVAQSDDD-----------------------------PNNTT 284
Y SY Q+ S P+N T
Sbjct: 192 SGAYSSPSYTAPSYGHYPQLTSSPTPAAPIAPLAPVIPGVPPAGGVPAASATPVIPDNCT 251
Query: 285 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 344
+FVGNL VT L LF YG + +++ A + FV+ A A+ L T +
Sbjct: 252 LFVGNLGPYVTQAELTPLFQTYGYVTDIRMQADRGYAFVKLDTSQAAVSAMATLQNTMVQ 311
Query: 345 GQNIRLSWGRSPSNKQAQ 362
G+ +++ WGR + AQ
Sbjct: 312 GRPLKIQWGREKPAEAAQ 329
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSCAE 332
P ++VGNL VTD L E+F+ G +V+ KI AG GFV++ D AE
Sbjct: 21 PKKPHLYVGNLSPRVTDYMLTEIFAVAGPVVNAKIIQDRNFQHAGFNYGFVEYIDMRSAE 80
Query: 333 EALRMLNGTQLGGQNIR 349
+A++ LNG ++ ++
Sbjct: 81 QAIQTLNGRKIFDAEVK 97
>gi|193636741|ref|XP_001950659.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Acyrthosiphon pisum]
Length = 348
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 115/213 (53%), Gaps = 18/213 (8%)
Query: 45 PPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQ---PGE-IRTLWIGDLQYWMDETYLNT 100
PP PP AT +P VPP QQ Q PG+ + +LW+G L+ +M E+++
Sbjct: 35 PPAYNVPPPTQTATTFISPN-----VPPVQQPQVSTPGQNVTSLWMGSLEPYMTESFITG 89
Query: 101 CFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMP--NGEQNFRL 157
F GE VK++RNK TG+ GY F++F ++ NG +P N F+L
Sbjct: 90 AFQKMGEYPKNVKLMRNKNTGETAGYAFVDFYDPVS---IMHKLNGKYIPGTNPPVRFKL 146
Query: 158 NWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKG 217
N A G+ D ++++G+L++DV DY L +TF RY S + AKVV+D G +KG
Sbjct: 147 NHAG-NPGKITTSDKDFSVWLGELSSDVDDYQLYKTFACRYQSIRTAKVVLDS-AGYSKG 204
Query: 218 YGFVRFGDESEQLRAMTEMNGV-FCSTRPMRIG 249
YGF+RF E EQ + MNG T+P+++
Sbjct: 205 YGFIRFSSEEEQKHCLNNMNGFPGLGTKPIKVS 237
>gi|262401121|gb|ACY66463.1| TIA-1-like protein [Scylla paramamosain]
Length = 325
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 136/275 (49%), Gaps = 12/275 (4%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F GEV + K+ R T + Y F+EF A + N
Sbjct: 1 YVGNLDNSVTEDLIMMLFGQLGEVRSCKMFREPTT---DPYCFVEFCDHMTALNAITMMN 57
Query: 145 GTPMPNGEQNFRLNWASFGAGEKR-----DDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+ N + R++WA+ G G K D + H ++VGDL+ ++ + L+E F+ +
Sbjct: 58 DKMLQN--RKMRVDWAT-GQGNKNKYTKVDTSRHHHVYVGDLSPEIDEQALREAFQV-FG 113
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
KVV D + +++GYGFV F + + +++ MNG + + ++ AT K +
Sbjct: 114 EISDCKVVKDPQSFKSRGYGFVVFVKKMDAETSISAMNGQWLGRKMIKTRWATRKPANTP 173
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
+ P+ N + P NTTVF G L +T+E L + F +GQ+ +KI K
Sbjct: 174 NETKPEQKKLNYDEVFNQTTPTNTTVFCGGLKQDITEEMLHKSFQPHGQIEKIKIFKEKG 233
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
F+++ + A +A+ L+ + L GQ IR SWG+
Sbjct: 234 YAFIKYTSKESACQAIVELHNSNLNGQMIRCSWGK 268
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 27/172 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL +DE L F GE+ KV+++ Q+ + GYGF+ F+ + AE +
Sbjct: 91 VYVGDLSPEIDEQALREAFQVFGEISDCKVVKDPQSFKSRGYGFVVFVKKMDAETSISAM 150
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTP------------------DHTIFVGDLAADV 185
NG + G + + WA+ ++T + T+F G L D+
Sbjct: 151 NGQWL--GRKMIKTRWATRKPANTPNETKPEQKKLNYDEVFNQTTPTNTTVFCGGLKQDI 208
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
T+ ML ++F+ P + K+ I + KGY F+++ + +A+ E++
Sbjct: 209 TEEMLHKSFQ---PHGQIEKIKI----FKEKGYAFIKYTSKESACQAIVELH 253
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 160/323 (49%), Gaps = 39/323 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ S D+ P N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSN 358
+GQ++ +++ K F++F+ A A+ +NGT + G ++ WG+ +P
Sbjct: 236 PFGQIMEIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ 295
Query: 359 KQAQ----PDPNQWNAGYYGYAQ 377
+Q Q P QW +YG AQ
Sbjct: 296 QQNQIGYPPAYGQWGQ-WYGNAQ 317
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 17/191 (8%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + +++ AT T S Q K +S V + ++ VFV
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSSSTVVSTQRSQDHFHVFV 110
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 111 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 170
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 171 WLGGRQIRTNW 181
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|308480880|ref|XP_003102646.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
gi|308261080|gb|EFP05033.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
Length = 358
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 106/191 (55%), Gaps = 8/191 (4%)
Query: 166 EKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
E R DT H +FVGDL+ DV++ +L+ TF+ +Y AKV+ D T ++KGYGFV F
Sbjct: 124 EMRIDTSKHFHVFVGDLSKDVSNELLKSTFQ-KYGEVSEAKVIRDAQTQKSKGYGFVSFP 182
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTT 284
++ A+ MNG + R +R A K + + + NS A +NT+
Sbjct: 183 NKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA------DNTS 236
Query: 285 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 344
V+VGN+ T+ LRE FS YG + V++ +R FV++ + CA +A+ +NG +L
Sbjct: 237 VYVGNISQQTTETDLRESFSTYGDIAEVRVFKTQRYAFVRYDKKECATKAIMEMNGKELT 296
Query: 345 GQNIRLSWGRS 355
G +R SWGR+
Sbjct: 297 GNQVRCSWGRT 307
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 21/167 (12%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + L + F GEV KVIR+ QT + +GYGF+ F ++ AE +
Sbjct: 135 VFVGDLSKDVSNELLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGM 194
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDD------------TPDHTIFVGDLAADVTDYMLQ 191
NG + G++ R NWA+ E+ D + +++VG+++ T+ L+
Sbjct: 195 NGKWI--GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTETDLR 252
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
E+F + Y +V +T+ Y FVR+ + +A+ EMNG
Sbjct: 253 ESF-STYGDIAEVRVF------KTQRYAFVRYDKKECATKAIMEMNG 292
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 144/285 (50%), Gaps = 13/285 (4%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQ 191
A L NG + E ++NWA+ + +K+ +H +FVGDL+ ++T ++
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIK 115
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R A
Sbjct: 116 SAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 174
Query: 252 TNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 309
T K S Q+ K V QS P N TV+ G + S +TD+ +R+ FS +GQ+
Sbjct: 175 TRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQTFSPFGQI 232
Query: 310 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 233 MEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 277
>gi|341903554|gb|EGT59489.1| CBN-TIAR-3 protein [Caenorhabditis brenneri]
Length = 417
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 110/203 (54%), Gaps = 14/203 (6%)
Query: 166 EKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
E R DT H +FVGDL+ DV++ +L+ TF+ +Y AKV+ D T ++KGYGFV F
Sbjct: 183 EMRIDTSKHFHVFVGDLSKDVSNDLLKSTFQ-KYGEVSEAKVIRDAQTQKSKGYGFVSFP 241
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTT 284
++ A+ MNG + R +R A K + + + NS A +NT+
Sbjct: 242 NKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA------DNTS 295
Query: 285 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 344
V+VGN+ TD LR+ FS YG + V++ +R FV++ + CA +A+ +NG ++
Sbjct: 296 VYVGNISQQTTDADLRDSFSTYGDIAEVRVFKTQRYAFVRYDKKECATKAIMEMNGKEMA 355
Query: 345 GQNIRLSWGRSPSNKQAQPDPNQ 367
G +R SWGR+ Q PNQ
Sbjct: 356 GNQVRCSWGRT------QAVPNQ 372
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 21/167 (12%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + L + F GEV KVIR+ QT + +GYGF+ F ++ AE +
Sbjct: 194 VFVGDLSKDVSNDLLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGM 253
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDD------------TPDHTIFVGDLAADVTDYMLQ 191
NG + G++ R NWA+ E+ D + +++VG+++ TD L+
Sbjct: 254 NGKWI--GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLR 311
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
++F ST G + + +T+ Y FVR+ + +A+ EMNG
Sbjct: 312 DSF-----STYGD--IAEVRVFKTQRYAFVRYDKKECATKAIMEMNG 351
>gi|389612022|dbj|BAM19544.1| tRNA selenocysteine associated protein secp43, partial [Papilio
xuthus]
Length = 295
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 100/175 (57%), Gaps = 5/175 (2%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ M E+++ F G+ + VKV+RNK TG+ GY F+ F + A +
Sbjct: 7 LWMGSLEPNMTESFIMAAFHRMGQRPLTVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 66
Query: 143 FNGTPMPNG--EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG P+P FRLN AS A + +++VGDL+ DV DY L F ++Y S
Sbjct: 67 LNGKPIPGTFPVVRFRLNTASREARSNLQQEREFSVWVGDLSPDVDDYSLYRVFASKYSS 126
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNK 254
K AKV++D TG TKGYGFVRFG+E EQ A+ MNG T+P++I A K
Sbjct: 127 IKTAKVILDG-TGYTKGYGFVRFGNEEEQRNALYAMNGYSGLGTKPLKICTAVPK 180
>gi|195035701|ref|XP_001989310.1| GH11659 [Drosophila grimshawi]
gi|193905310|gb|EDW04177.1| GH11659 [Drosophila grimshawi]
Length = 364
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 104/178 (58%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG +P N FRLN AS G +R+ +++VGDL +DV DY L + F ++
Sbjct: 68 LNGKHIPGTNPIVRFRLNSASNSFKLPGNERE----FSVWVGDLTSDVDDYSLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
Y S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG V T+P++I A K
Sbjct: 124 YTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYVGLGTKPIKICNAVPK 180
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 42/221 (19%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFC-STRPM---RIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
+NG T P+ R+ A+N + G ++ +V+VG+L
Sbjct: 68 LNGKHIPGTNPIVRFRLNSASNSFKLPGNER-------------------EFSVWVGDLT 108
Query: 292 SIVTDEHLRELF-SQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQLG 344
S V D L ++F S+Y + K+ K GFV+F + AL +NG LG
Sbjct: 109 SDVDDYSLYKVFSSKYTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYVGLG 168
Query: 345 GQNIRLSWGRSPSNKQAQPDPN-QWNAGYYGYAQGYENYGY 384
+ I++ A P P + NA G NYGY
Sbjct: 169 TKPIKIC--------NAVPKPKAELNA---ALGNGSNNYGY 198
>gi|291386623|ref|XP_002709696.1| PREDICTED: TIA1 cytotoxic granule-associated RNA binding
protein-like [Oryctolagus cuniculus]
Length = 386
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 142/276 (51%), Gaps = 17/276 (6%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G K+I + T + Y F+EF A L N
Sbjct: 21 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAMN 78
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A + A
Sbjct: 79 GRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRISDA 135
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP 264
+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K P
Sbjct: 136 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA------P 189
Query: 265 KASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
K++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS +GQ++ +++ K
Sbjct: 190 KSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDK 249
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
FV+F A A+ +NGT + G ++ WG+
Sbjct: 250 GYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 93 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 152
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 153 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 210
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 211 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 263
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 264 HAIVSVNGT 272
>gi|146420743|ref|XP_001486325.1| hypothetical protein PGUG_01996 [Meyerozyma guilliermondii ATCC
6260]
Length = 397
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 141/309 (45%), Gaps = 44/309 (14%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++G++ ++E YL+ F T +VK++ +K Y F+EF +R AE VL
Sbjct: 79 VLYVGNIPKTVNEQYLHELFDKTK---SVKLLHDKNKPGFN-YAFVEFDTREDAESVLTA 134
Query: 143 FNGTPMPNGEQNFRLNWA---SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
FNG+ + G + ++NWA S + + P +TIFVGDL+A+V D L + F ++P
Sbjct: 135 FNGSEV--GGSSIKINWAYQLSTISTSSSPELPLYTIFVGDLSAEVDDETLGKAFD-QFP 191
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S K A V+ D T R++GYGFV F D +E A+ M G+F R +R A+++
Sbjct: 192 SRKQAHVMWDMQTSRSRGYGFVSFADPAEAENALVTMPGLFIGGRAIRCNWASHRHMYQK 251
Query: 260 QQQYPKASYQNSQVAQS----------DDDPNN------------------------TTV 285
+ P S A + D NN TTV
Sbjct: 252 KNTRPPPKRSASAGATTPPLPYTAQGYPIDTNNGGRNPQPQAPKSFEVVLRQAPNWQTTV 311
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
++GN+ L L +G +V K K C FV++ A A+ L G + G
Sbjct: 312 YLGNIAHFTHLSDLIPLLQNFGFIVDFKFHPSKGCAFVKYDSHERAALAIVQLAGYSVNG 371
Query: 346 QNIRLSWGR 354
+ ++ WGR
Sbjct: 372 RPLKCGWGR 380
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 281 NNTTVFVGNLDSIVTDEHLRELF--SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
+NT ++VGN+ V +++L ELF ++ +L+H K G FV+F R AE L
Sbjct: 76 SNTVLYVGNIPKTVNEQYLHELFDKTKSVKLLHDKNKPGFNYAFVEFDTREDAESVLTAF 135
Query: 339 NGTQLGGQNIRLSWGRSPSNKQAQPDP 365
NG+++GG +I+++W S P
Sbjct: 136 NGSEVGGSSIKINWAYQLSTISTSSSP 162
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 26/189 (13%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
+ + ++VG++ V + L E F TK K++ D+ Y FV F +
Sbjct: 74 EISNTVLYVGNIPKTVNEQYLHELF----DKTKSVKLLHDK-NKPGFNYAFVEFDTREDA 128
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGN 289
+T NG ++I A T+S Y T+FVG+
Sbjct: 129 ESVLTAFNGSEVGGSSIKINWAYQLSTISTSSSPELPLY---------------TIFVGD 173
Query: 290 LDSIVTDEHLRELFSQY--GQLVHV----KIPAGKRCGFVQFADRSCAEEALRMLNGTQL 343
L + V DE L + F Q+ + HV + + GFV FAD + AE AL + G +
Sbjct: 174 LSAEVDDETLGKAFDQFPSRKQAHVMWDMQTSRSRGYGFVSFADPAEAENALVTMPGLFI 233
Query: 344 GGQNIRLSW 352
GG+ IR +W
Sbjct: 234 GGRAIRCNW 242
>gi|112983244|ref|NP_001037608.1| tRNA selenocysteine 1-associated protein 1 [Bombyx mori]
gi|102269199|gb|ABF55965.2| CG15440-like protein [Bombyx mori]
Length = 214
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 102/176 (57%), Gaps = 7/176 (3%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ M E+++ F G+ +AVKV+RNK TG+ GY F+ F + A +
Sbjct: 12 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 71
Query: 143 FNGTPMPNG--EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG P+P FRLN AS + +++VGDL+ DV DY L F ++Y S
Sbjct: 72 LNGKPIPGTFPVVRFRLNTASRETRANMQHEREFSVWVGDLSPDVDDYSLYRVFASKYTS 131
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC--STRPMRIGPATNK 254
K AKV++D +G TKGYGFVRFG+E EQ A+ MNG +C T+P++I A K
Sbjct: 132 IKTAKVILDN-SGYTKGYGFVRFGNEDEQRNALYAMNG-YCGLGTKPLKICTAVPK 185
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 147/290 (50%), Gaps = 28/290 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+GQ++ +++ K FV+F A A+ +NGT + G ++ WG+
Sbjct: 236 PFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+D T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ MNG + +++ AT T S Q K +S V + ++ VFVG
Sbjct: 59 AAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSSSTVVSTQRSQDHFHVFVG 111
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 112 DLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 171
Query: 343 LGGQNIRLSW 352
LGG+ IR +W
Sbjct: 172 LGGRQIRTNW 181
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|344283907|ref|XP_003413712.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Loxodonta
africana]
Length = 386
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 147/290 (50%), Gaps = 28/290 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+GQ++ +++ K FV+F A A+ +NGT + G ++ WG+
Sbjct: 236 PFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+D T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ MNG + +++ AT T S Q K +S V + ++ VFVG
Sbjct: 59 AAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSSSTVVSTQRSQDHFHVFVG 111
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 112 DLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 171
Query: 343 LGGQNIRLSW 352
LGG+ IR +W
Sbjct: 172 LGGRQIRTNW 181
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|108864589|gb|ABG22554.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 403
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 146/292 (50%), Gaps = 25/292 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + ++ L+ F G V K+IR +++ +GF+++ R A +
Sbjct: 41 RSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSS----FGFVDYYDRRSAAIAIV 96
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + Q ++NWA A +R+DT H IFVGDL +VTD L A + S
Sbjct: 97 SLNGRQLFG--QPIKVNWAY--ASTQREDTSGHFNIFVGDLCPEVTDAALFAF-FAGFTS 151
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A+V+ D+ TGR++G+GFV F ++ + A+ E+NG + R +R AT +
Sbjct: 152 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCNWATKGANAGEE 211
Query: 261 QQ---------YPKASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY- 306
+Q S + + ++D P N TTV+VGNL V + F
Sbjct: 212 KQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSNDVHRFFHSLG 271
Query: 307 -GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
G + V++ K GFV+++ A A++ NG +GG+ I+ SWG P+
Sbjct: 272 VGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKCSWGSKPT 323
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +L E F++ P +G K++ +GFV + D
Sbjct: 36 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGP-VEGCKLI----RKEKSSFGFVDYYDRRS 90
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG +P+++ + AS Q +D + +FVG
Sbjct: 91 AAIAIVSLNGRQLFGQPIKV-------------NWAYAS------TQREDTSGHFNIFVG 131
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L VTD L F+ + ++ ++ G FV F ++ A+ A+ LNG
Sbjct: 132 DLCPEVTDAALFAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKW 191
Query: 343 LGGQNIRLSWGRSPSN 358
LG + +R +W +N
Sbjct: 192 LGNRQVRCNWATKGAN 207
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 335
D +V+VGN+ VTD L E+F G + K+ ++ GFV + DR A A+
Sbjct: 36 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDRRSAAIAI 95
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQ 360
LNG QL GQ I+++W + + ++
Sbjct: 96 VSLNGRQLFGQPIKVNWAYASTQRE 120
>gi|45184976|ref|NP_982694.1| AAR151Wp [Ashbya gossypii ATCC 10895]
gi|44980597|gb|AAS50518.1| AAR151Wp [Ashbya gossypii ATCC 10895]
Length = 481
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 111/226 (49%), Gaps = 52/226 (23%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI------------------- 122
RTLW+GDL DE + + G V VK+IR K+ I
Sbjct: 22 RTLWMGDLDPSFDEATIQHVWLTVGHQVQVKLIRAKKNLLIPCSTSSTLSASHVDEERIQ 81
Query: 123 ----------------EGYGFIEFISRAGAERVLQTFNGTPMPN-------------GEQ 153
GY F++F + A+ LQ N TP+PN G++
Sbjct: 82 INGVSFIDPNTTQLHHAGYCFVQFANLQEAQAGLQ-LNATPLPNVVSPTTRNPTNPTGKR 140
Query: 154 NFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
NFRLNWAS GA + D TP+ ++FVGDL+ T+ L F+ ++ S K +V+ D +
Sbjct: 141 NFRLNWAS-GATLQSDIPATPEFSLFVGDLSPTATEAHLLSLFQTKFKSVKTVRVMTDPI 199
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
TG ++ +GFVRF DE E+ RA+ EMNGV+C R +R+ AT + +
Sbjct: 200 TGASRCFGFVRFADEKERRRALAEMNGVWCQGRQLRVAYATPRNNL 245
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
D NTTVF+G L +++++ L LF +G ++ VK+P G+ CGFV+F +R AE A++ +
Sbjct: 322 DTANTTVFIGGLSNMISEGQLHALFMPFGNILSVKVPPGRGCGFVRFENRMDAEAAIQGM 381
Query: 339 NGTQLGGQNIRLSWGRS 355
G +GG IRLSWGR+
Sbjct: 382 QGFIVGGNAIRLSWGRT 398
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 217 GYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQS 276
GY FV+F + E +A ++N + P + P T T ++ + ++ + QS
Sbjct: 99 GYCFVQFANLQEA-QAGLQLNA---TPLPNVVSPTTRNPTNPTGKRNFRLNWASGATLQS 154
Query: 277 DDDPN-NTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVK-----IPAGKRC-GFVQFADR 328
D ++FVG+L T+ HL LF +++ + V+ I RC GFV+FAD
Sbjct: 155 DIPATPEFSLFVGDLSPTATEAHLLSLFQTKFKSVKTVRVMTDPITGASRCFGFVRFADE 214
Query: 329 SCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
AL +NG G+ +R+++ +P N
Sbjct: 215 KERRRALAEMNGVWCQGRQLRVAYA-TPRNN 244
>gi|374105894|gb|AEY94805.1| FAAR151Wp [Ashbya gossypii FDAG1]
Length = 475
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 111/226 (49%), Gaps = 52/226 (23%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI------------------- 122
RTLW+GDL DE + + G V VK+IR K+ I
Sbjct: 22 RTLWMGDLDPSFDEATIQHVWLTVGHQVQVKLIRAKKNLLIPCSTSSTLSASHVDEERIQ 81
Query: 123 ----------------EGYGFIEFISRAGAERVLQTFNGTPMPN-------------GEQ 153
GY F++F + A+ LQ N TP+PN G++
Sbjct: 82 INGVSFIDPNTTQLHHAGYCFVQFANLQEAQAGLQ-LNATPLPNVVSPTTRNPTNPTGKR 140
Query: 154 NFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
NFRLNWAS GA + D TP+ ++FVGDL+ T+ L F+ ++ S K +V+ D +
Sbjct: 141 NFRLNWAS-GATLQSDIPATPEFSLFVGDLSPTATEAHLLSLFQTKFKSVKTVRVMTDPI 199
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
TG ++ +GFVRF DE E+ RA+ EMNGV+C R +R+ AT + +
Sbjct: 200 TGASRCFGFVRFADEKERRRALAEMNGVWCQGRQLRVAYATPRNNL 245
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
D NTTVF+G L +++++ L LF +G ++ VK+P G+ CGFV+F +R AE A++ +
Sbjct: 322 DTANTTVFIGGLSNMISEGQLHALFMPFGNILSVKVPPGRGCGFVRFENRMDAEAAIQGM 381
Query: 339 NGTQLGGQNIRLSWGRS 355
G +GG IRLSWGR+
Sbjct: 382 QGFIVGGNAIRLSWGRT 398
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 217 GYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQS 276
GY FV+F + E +A ++N + P + P T T ++ + ++ + QS
Sbjct: 99 GYCFVQFANLQEA-QAGLQLNA---TPLPNVVSPTTRNPTNPTGKRNFRLNWASGATLQS 154
Query: 277 DDDPN-NTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVK-----IPAGKRC-GFVQFADR 328
D ++FVG+L T+ HL LF +++ + V+ I RC GFV+FAD
Sbjct: 155 DIPATPEFSLFVGDLSPTATEAHLLSLFQTKFKSVKTVRVMTDPITGASRCFGFVRFADE 214
Query: 329 SCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
AL +NG G+ +R+++ +P N
Sbjct: 215 KERRRALAEMNGVWCQGRQLRVAYA-TPRNN 244
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 161/323 (49%), Gaps = 39/323 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSN 358
+GQ++ +++ K FV+F A A+ +NGT + G ++ WG+ +P
Sbjct: 236 PFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ 295
Query: 359 KQAQ---PDP-NQWNAGYYGYAQ 377
+Q Q P P QW +YG AQ
Sbjct: 296 QQNQIGYPQPYGQWGQ-WYGNAQ 317
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 17/191 (8%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + +++ AT T S Q K +S V + ++ VFV
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSSSTVVSTQRSQDHFHVFV 110
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 111 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 170
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 171 WLGGRQIRTNW 181
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 156/326 (47%), Gaps = 24/326 (7%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRD---DTP-------DH-TIFVGDL 181
A L NG + E ++NWA+ + +K+ TP DH +FVGDL
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDL 115
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G +
Sbjct: 116 SPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 174
Query: 242 STRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 301
R +R AT K Q + + P N TV+ G + S +TD+ +R+
Sbjct: 175 GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQ 234
Query: 302 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQ 360
FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 235 TFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTK 294
Query: 361 A--QPDPNQWN--AGYYGYAQGYENY 382
Q D +QW + YG Q Y Y
Sbjct: 295 NFQQVDYSQWGQWSQVYGNPQQYGQY 320
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 141/276 (51%), Gaps = 17/276 (6%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G K+I + T + Y F+EF A L N
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAMN 58
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A + A
Sbjct: 59 GRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRISDA 115
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP 264
+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K P
Sbjct: 116 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA------P 169
Query: 265 KASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
K++Y+ + S D+ P+N TV+ G + S +T++ +R+ FS +GQ++ +++ K
Sbjct: 170 KSTYEANTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDK 229
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
FV+F A A+ +NGT + G ++ WG+
Sbjct: 230 GYSFVRFNSHESAAHAIVSVNGTTIEGHIVKCYWGK 265
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 73 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 132
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 133 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYEANTKQLSYDEVVNQSS 190
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 191 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 243
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 244 HAIVSVNGT 252
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 161/323 (49%), Gaps = 39/323 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSN 358
+GQ++ +++ K FV+F A A+ +NGT + G ++ WG+ +P
Sbjct: 236 PFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ 295
Query: 359 KQAQ---PDP-NQWNAGYYGYAQ 377
+Q Q P P QW +YG AQ
Sbjct: 296 QQNQIGYPQPYGQWGQ-WYGNAQ 317
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 17/191 (8%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + +++ AT T S Q K +S V + ++ VFV
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSSSTVVSTQRSQDHFHVFV 110
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 111 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 170
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 171 WLGGRQIRTNW 181
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|389747119|gb|EIM88298.1| hypothetical protein STEHIDRAFT_95374 [Stereum hirsutum FP-91666
SS1]
Length = 932
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 114/212 (53%), Gaps = 40/212 (18%)
Query: 83 TLWIGDLQYWMDETYLN-TCFAHTGEVVAVKVIR---NKQTGQIE---GYGFIEFISRAG 135
TLW G+L+ WMDE Y C + +++KV + TGQ GY F+ F ++
Sbjct: 184 TLWWGELEPWMDEEYAKQVCGLMNWDPLSIKVPHPAPDPVTGQQANNPGYCFLTFSTQGQ 243
Query: 136 AERVLQTFN----GTP--MPNGEQNFRLNWASF-----------GAGEKRDDTP-DHTIF 177
A VL N GTP MPN + F LNWAS G ++ P +++IF
Sbjct: 244 ASSVLNQINTTNSGTPITMPNSTKPFLLNWASSTPIPPSLSPPGGVSAQQQQYPKEYSIF 303
Query: 178 VGDLAADVTDYMLQETFRA--------RYP-------STKGAKVVIDRLTGRTKGYGFVR 222
VGDLA + ++ L FR R P S K AK+++D +TG ++GYGFVR
Sbjct: 304 VGDLAPEASNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPVTGVSRGYGFVR 363
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
F DE++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 364 FTDEADQQRALIEMHGLYCLSRPMRISPATAK 395
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 276 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEAL 335
+ DP NTTVFVG L ++++E LR F+ +G++ +VK+P GK CGFVQF ++ AE A+
Sbjct: 558 TSTDPYNTTVFVGGLSPLISEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKADAERAI 617
Query: 336 RMLNGTQLGGQNIRLSWGRS 355
+ G +GG IRLSWGRS
Sbjct: 618 EKMQGFPIGGSRIRLSWGRS 637
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA GE+ VKV K G F++F+ +A AER ++
Sbjct: 566 TVFVGGLSPLISEETLRTFFAPFGEIHYVKVPVGKHCG------FVQFVRKADAERAIEK 619
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 620 MQGFPI--GGSRIRLSW 634
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 161/323 (49%), Gaps = 39/323 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSN 358
+GQ++ +++ K FV+F A A+ +NGT + G ++ WG+ +P
Sbjct: 236 PFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ 295
Query: 359 KQAQ---PDP-NQWNAGYYGYAQ 377
+Q Q P P QW +YG AQ
Sbjct: 296 QQNQIGYPQPYGQWGQ-WYGNAQ 317
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 17/191 (8%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + +++ AT T S Q K +S V + ++ VFV
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSSSTVVSTQRSQDHFHVFV 110
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 111 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 170
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 171 WLGGRQIRTNW 181
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|10801574|dbj|BAB16700.1| TIA-1 like protein [Bombyx mori]
Length = 285
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 140/278 (50%), Gaps = 12/278 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E +L T F G+V K+IR + Y F+EF A L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGXIGDVKGCKIIREPGN---DPYAFLEFTCHTAAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPS 200
N + + E ++NWA+ + + DT +H IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMNKRVVLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
++V D T ++KGY FV F +++ A+ MNG + +R +R +T K G
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 261 QQYPKASYQNSQ----VAQSDDDPNNTTVFVGNLDS-IVTDEHLRELFSQYGQLVHVKIP 315
+ +S + Q + P NTTV+ G S I+T+E ++ FSQ+GQ+ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353
K F++F + A A+ + T++ G ++ WG
Sbjct: 242 RDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWG 279
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 334
D+ + T++VGNLD VT+ L LF G + KI P F++F + A A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGXIGDVKGCKIIREPGNDPYAFLEFTCHTAAATA 62
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNK 359
L +N + + ++++W SP N+
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 147/290 (50%), Gaps = 28/290 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVNTLRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ S DD P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNAKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+GQ++ +++ K FV+F A A+ +NGT + G ++ WG+
Sbjct: 236 PFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 17/191 (8%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + +++ AT T S Q K +S V + ++ VFV
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSSSTVVNTLRSQDHFHVFV 110
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 111 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 170
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 171 WLGGRQIRTNW 181
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|413918499|gb|AFW58431.1| hypothetical protein ZEAMMB73_000058 [Zea mays]
Length = 175
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 92/136 (67%), Gaps = 7/136 (5%)
Query: 275 QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEA 334
SD D +N TV+VG LD V+++ LR+ F++Y L VKIP GK+CGFVQF R+ AEEA
Sbjct: 40 HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEA 98
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQGYENYGYAAAAPQDPS 393
L+ LNG+ +G Q +RLSW RSPS+KQ++ D N+ N YYG Y YGYA+ P P+
Sbjct: 99 LQGLNGSLIGKQAVRLSWVRSPSHKQSRGDSVNRRNNMYYG-TPFYGGYGYASPVPH-PN 156
Query: 394 MY---YGGYPGYGNYQ 406
MY YG YP YGN Q
Sbjct: 157 MYAAAYGTYPLYGNQQ 172
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 53 PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
P M + +G + P G RT+++G L + E L FA ++ +VK
Sbjct: 20 PNMCSLLKFLNSDSGSSTPGHSDGDSSN-RTVYVGGLDPNVSEDELRKAFAKY-DLASVK 77
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
+ KQ G F++F+SR AE LQ NG+ + G+Q RL+W
Sbjct: 78 IPLGKQCG------FVQFVSRTDAEEALQGLNGSLI--GKQAVRLSWV 117
>gi|16215606|emb|CAC95018.1| TIA-1 protein [Xenopus laevis]
Length = 388
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 148/290 (51%), Gaps = 28/290 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G + K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRD----------DTPDH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ +++ +
Sbjct: 65 AINGRKILGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEISTDDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNS------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++++++ + + P+N TV+ G + S ++++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTFESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLSEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+GQ++ V++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 236 PFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 165/346 (47%), Gaps = 36/346 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 364
+GQ++ +++ K FV+F A A+ +NGT + G ++ WG+ +
Sbjct: 236 PFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ 295
Query: 365 PNQWNAGYYGYAQGYENYGYAAAAPQDPSMYY-GGY--PGYGNYQQ 407
NQ GY Q Y +G Q Y G+ P YG Y Q
Sbjct: 296 QNQ-----IGYPQPYGQWGQWYGNAQQIGQYTPNGWQVPAYGMYGQ 336
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 17/191 (8%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ MNG + +++ AT T S Q K +S V + ++ VFV
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSSSTVVSTQRSQDHFHVFV 110
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGT 341
G+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 111 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 170
Query: 342 QLGGQNIRLSW 352
LGG+ IR +W
Sbjct: 171 WLGGRQIRTNW 181
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|324510042|gb|ADY44204.1| Nucleolysin TIAR [Ascaris suum]
Length = 367
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 4/204 (1%)
Query: 155 FRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGR 214
+ NWA K D + +FVGDLA ++ + L+ F A Y AKV+ D T +
Sbjct: 115 LKANWAMQNQMPKVDTSKHFHVFVGDLATEIDNNALKAAFAA-YGEISEAKVIRDPQTMK 173
Query: 215 TKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVA 274
+KGYGFV F + +A+ MNG R +R A+ +K S ++ + K +
Sbjct: 174 SKGYGFVSFPSKESAEKAIAGMNGQLIGRRQIRTNWAS-RKPASAEEAHTKEQTFDEVFN 232
Query: 275 QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEA 334
+ D NT+V+VGN+ S T+E LRE F+ G + V+I + FV++A + A A
Sbjct: 233 ATRAD--NTSVYVGNVHSSTTEEDLREAFASIGAISEVRIFKQQGYAFVRYATKEAATRA 290
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSN 358
+ +NG ++ GQNI+ SWGR+P++
Sbjct: 291 IMQMNGKEINGQNIKCSWGRTPND 314
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL +D L FA GE+ KVIR+ QT + +GYGF+ F S+ AE+ +
Sbjct: 136 VFVGDLATEIDNNALKAAFAAYGEISEAKVIRDPQTMKSKGYGFVSFPSKESAEKAIAGM 195
Query: 144 NGTPMPNGEQNFRLNWASFG-AGEKRDDTPDHT--------------IFVGDLAADVTDY 188
NG + G + R NWAS A + T + T ++VG++ + T+
Sbjct: 196 NGQLI--GRRQIRTNWASRKPASAEEAHTKEQTFDEVFNATRADNTSVYVGNVHSSTTEE 253
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
L+E F ++ GA + + + +GY FVR+ + RA+ +MNG
Sbjct: 254 DLREAF-----ASIGA--ISEVRIFKQQGYAFVRYATKEAATRAIMQMNG 296
>gi|297307145|ref|NP_001167497.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Xenopus laevis]
gi|50416510|gb|AAH77169.1| Unknown (protein for MGC:78766) [Xenopus laevis]
Length = 385
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 148/290 (51%), Gaps = 28/290 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G + K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRD----------DTPDH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ +++ +
Sbjct: 65 AINGRKILGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEISTDDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNS------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++++++ + + P+N TV+ G + S ++++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTFESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLSEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+GQ++ V++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 236 PFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 163/349 (46%), Gaps = 34/349 (9%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG-------- 124
+ GQP RTL++G+L + E + F+ G + K+I + G+ G
Sbjct: 40 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDGRRVGASVSFPVM 96
Query: 125 -------YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 97 PNANNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 154
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 155 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 213
Query: 238 GVFCSTRPMRIGPATNKKTV--SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 295
G + R +R AT K S Q+ K V QS N TV+ G + + ++
Sbjct: 214 GQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSS--KNCTVYCGGIGAGLS 271
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
++ +R+ F +GQ++ +++ K F++F+ A A+ +NGT + G ++ WG+
Sbjct: 272 EQLMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWGKE 331
Query: 356 P---SNKQAQPDPNQWN--AGYYGYAQGYENYGYAAAAPQDPSMYYGGY 399
+ Q D +QW + YG Q Y Y A Q PS YG Y
Sbjct: 332 TPDMTKNFQQVDYSQWGQWSQMYGSPQQYGQ--YVANGWQVPS--YGMY 376
>gi|157131106|ref|XP_001655804.1| tRNA selenocysteine associated protein (secp43) [Aedes aegypti]
gi|108871647|gb|EAT35872.1| AAEL011988-PA [Aedes aegypti]
Length = 318
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 5/175 (2%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE VK++RNK TG GY F+ F + A +
Sbjct: 8 LWMGSLESYMTENFILAAFRKMGEDPQTVKLMRNKYTGDPAGYCFVSFKTDEAAIDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG P+P N FRLN A+ + + +++VGDL++DV DY L F A+Y S
Sbjct: 68 LNGKPIPGTNPLVRFRLNSATNNQNKALLADREFSVWVGDLSSDVDDYSLYRVFSAKYTS 127
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNK 254
K AKV++D +G +KGYGFV+FG E EQ A+ EMNG +P++I A K
Sbjct: 128 IKTAKVILDS-SGFSKGYGFVKFGLEDEQKSALYEMNGFIGLGCKPLKICNAVPK 181
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 42/247 (17%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR + K++ ++ TG GY FV F + + AM +
Sbjct: 8 LWMGSLESYMTENFILAAFRKMGEDPQTVKLMRNKYTGDPAGYCFVSFKTDEAAIDAMHK 67
Query: 236 MNGV-FCSTRPM---RIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
+NG T P+ R+ ATN + KA + + +V+VG+L
Sbjct: 68 LNGKPIPGTNPLVRFRLNSATNNQN--------KALLADREF----------SVWVGDLS 109
Query: 292 SIVTDEHLRELFS-QYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQLG 344
S V D L +FS +Y + K+ K GFV+F + AL +NG LG
Sbjct: 110 SDVDDYSLYRVFSAKYTSIKTAKVILDSSGFSKGYGFVKFGLEDEQKSALYEMNGFIGLG 169
Query: 345 GQNIRLSWGR-SPSNKQ-----AQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG 398
+ +++ P N+ P+ + YG A Y Y DPS Y+
Sbjct: 170 CKPLKICNAVPKPKNELGPAGPTSSTPSAASLLGYGTATDYSQY-------YDPSTYWQN 222
Query: 399 YPGYGNY 405
Y + Y
Sbjct: 223 YSAWQGY 229
>gi|345324102|ref|XP_001514793.2| PREDICTED: nucleolysin TIAR-like [Ornithorhynchus anatinus]
Length = 452
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 145/288 (50%), Gaps = 28/288 (9%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 130 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 187
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 188 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 246
Query: 245 PMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEH 298
+R AT K PK++ +NS +D P N TV+ G + S +TD+
Sbjct: 247 QIRTNWATRKPPA------PKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQL 300
Query: 299 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPS 357
+R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP
Sbjct: 301 MRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPD 360
Query: 358 NKQA--QPDPNQWNAGYYGYAQGYEN---YG-YAAAAPQDPSMYYGGY 399
+ Q D +QW ++Q Y N YG Y A Q PS YG Y
Sbjct: 361 MTKNFQQVDYSQWGQ----WSQVYGNPQQYGQYMANGWQVPS--YGMY 402
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 165 TPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVS 224
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDDT 171
F ++ AE + G + G + R NWA+ F +
Sbjct: 225 FYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSP 282
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 283 KNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAAH 335
Query: 232 AMTEMNGV 239
A+ +NG
Sbjct: 336 AIVSVNGT 343
>gi|326924063|ref|XP_003208252.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIAR-like [Meleagris
gallopavo]
Length = 382
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 161/330 (48%), Gaps = 34/330 (10%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G + K+I + + Y F+EF A L N
Sbjct: 22 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMN 79
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A + A
Sbjct: 80 GRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISDA 136
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI--------GPATNKKT 256
+VV D TG++KGYGFV F ++ + A+ M G + R +R P + ++
Sbjct: 137 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRXXXXXXXXPAPKSTQEN 196
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 316
+ Q ++ Q+S P N TV+ G + S +TD+ +R+ FS +GQ++ +++
Sbjct: 197 NTKQLRFEDVVNQSS--------PKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFP 248
Query: 317 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWNAGYY 373
K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +QW
Sbjct: 249 EKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQ--- 305
Query: 374 GYAQGYEN---YG-YAAAAPQDPSMYYGGY 399
++Q Y N YG Y A Q PS YG Y
Sbjct: 306 -WSQVYGNPQQYGQYMANGWQVPS--YGMY 332
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+ F
Sbjct: 96 PSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSF 155
Query: 131 ISRAGAERVLQTFNG----------------TPMPNGEQNFRLNWASFGAGEKRDDTPDH 174
++ AE + G P P Q F + +
Sbjct: 156 YNKLDAENAIVHMGGQWLGGRQIRXXXXXXXXPAPKSTQENNTKQLRFEDVVNQSSPKNC 215
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T++ G +A+ +TD ++++TF P + +++ KGY FVRF A+
Sbjct: 216 TVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAAHAIV 268
Query: 235 EMNG 238
+NG
Sbjct: 269 SVNG 272
>gi|387017380|gb|AFJ50808.1| Nucleolysin TIAR [Crotalus adamanteus]
Length = 388
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 143/299 (47%), Gaps = 25/299 (8%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK--------------- 117
+ GQP +TL++G+L + E + F+ G + K+I +
Sbjct: 2 EDDGQP---KTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVL 58
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Q + Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 59 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 116
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 117 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMG 175
Query: 238 GVFCSTRPMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 295
G + R +R AT K S Q+ K V QS P N TV+ G + S +T
Sbjct: 176 GQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLT 233
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
D+ +R+ FS +GQ+V + K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 234 DQLMRQTFSPFGQIVETRAFPVKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 292
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 100 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMTTGKSKGYGFV 159
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 160 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 217
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 218 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IVETRAFPVKGYSFVRFSTHESAA 270
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 271 HAIVSVNGT 279
>gi|225713382|gb|ACO12537.1| tRNA selenocysteine-associated protein 1 [Lepeophtheirus salmonis]
gi|290463033|gb|ADD24564.1| tRNA selenocysteine 1-associated protein 1 [Lepeophtheirus
salmonis]
Length = 257
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGE--VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
LWIG L+ +MDE ++ A GE ++++KVI+NK TG YGFI F + A +
Sbjct: 7 LWIGGLEPYMDEEFIRNSLALMGEDKIISIKVIKNKFTGVPASYGFINFEDDSCALMAMH 66
Query: 142 TFNGTPMPNGE--QNFRLNWAS--FGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG +PN F+LN S GEK D +I+VGDL DV D L + F +R
Sbjct: 67 KLNGKIIPNSTPPVRFKLNHNSTRLMPGEK-----DSSIWVGDLTPDVDDLTLFKFFSSR 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNK 254
+ S K AKVV+D+ +G +KGYGF+RFG+E EQ A+ M GV +P+++ A K
Sbjct: 122 FQSIKSAKVVLDQ-SGFSKGYGFIRFGNEQEQQSALISMMGVSGLGAKPIKVSLAIPK 178
>gi|23928438|gb|AAN40024.1| putative oligouridylate binding protein [Zea mays]
Length = 639
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 145/285 (50%), Gaps = 23/285 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + +T L F G V K+IR +++ +GFI++ R A +
Sbjct: 118 CRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYAALAI 173
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
+ NG + Q ++NWA R+DT H IFVGDL +VTD L F Y
Sbjct: 174 LSLNGRQLYG--QPIKVNWAY--TSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSG-YS 228
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN------ 253
+ A+V+ D+ TGR++G+GFV F ++ + A+ ++NG + R +R AT
Sbjct: 229 TCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGE 288
Query: 254 -KKTVSGQQQYPKASYQNSQVAQSDDDPNN----TTVFVGNL--DSIVTDEHLRELFSQY 306
K+ + + S ++ + +DD P N TTV+VGNL ++ + D HL
Sbjct: 289 EKQILDTKVDLSNGSSESGKENPNDDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSLGA 348
Query: 307 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
G + V++ K GFV+++ A A++M NG +GG+ I+ S
Sbjct: 349 GSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKSS 393
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +LQE F++ P +G K++ +GF+ + D
Sbjct: 114 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGP-VEGCKLI----RKEKSSFGFIDYYDRRY 168
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG +P+++ A P+ +D + +FVG
Sbjct: 169 AALAILSLNGRQLYGQPIKVNWAYTST--------PR-----------EDTSGHFNIFVG 209
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ G FV F ++ A+ A+ LNG
Sbjct: 210 DLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKW 269
Query: 343 LGGQNIRLSWGRSPSN 358
LG + IR +W +N
Sbjct: 270 LGNRQIRCNWATKGAN 285
>gi|289740797|gb|ADD19146.1| RNA-binding protein ELAV/HU [Glossina morsitans morsitans]
Length = 343
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 105/178 (58%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ F + A +
Sbjct: 9 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFATDEQAMDAMHK 68
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 69 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 124
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
Y S K AKV++D +G +KGYGFVRFG E EQ A+ +MNG + T+P++I A K
Sbjct: 125 YTSIKTAKVILDS-SGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 181
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 41/244 (16%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L +T+ + FR +++ ++ TG GY FV F + + + AM +
Sbjct: 9 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFATDEQAMDAMHK 68
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNT---TVFVGNLDS 292
+NG +P+ P TN P ++ + + S P N +V+VG+L S
Sbjct: 69 LNG-----KPI---PGTN----------PIVRFRLNSASNSYKLPGNEREFSVWVGDLSS 110
Query: 293 IVTDEHLRELF-SQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQLGG 345
V D L ++F S+Y + K+ K GFV+F + AL +NG LG
Sbjct: 111 DVDDYQLYKVFSSKYTSIKTAKVILDSSGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGT 170
Query: 346 QNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQG-YENYGYAAAAPQDPSMYYGGYPGYGN 404
+ I++ A P P G A G NYGY +A + S Y
Sbjct: 171 KPIKIC--------NAVPKPKN----ELGVALGTTSNYGYGGSANANTSTTTVSGTDYSQ 218
Query: 405 YQQP 408
Y P
Sbjct: 219 YYDP 222
>gi|354545611|emb|CCE42339.1| hypothetical protein CPAR2_808880 [Candida parapsilosis]
Length = 739
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 118/217 (54%), Gaps = 29/217 (13%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVV---------AVKVIRNKQTGQIEGYGFIEFIS 132
RTLW+GDL W+DE + + + + A+K+ Q GY F+EF S
Sbjct: 123 RTLWMGDLDSWLDEQQITDLWWNLLKKKVGVKIIKPKALKLDPQLQGLTNSGYCFVEFES 182
Query: 133 RAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRD--DTPDHT 175
A++ L + NG +P N ++ FRLNWAS GA P+++
Sbjct: 183 FEDAQQAL-SLNGQLLPDIAMPSQQLYPNNPDNQKKYFRLNWAS-GATLSAPIVQMPEYS 240
Query: 176 IFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+FVGDL+A T+ L F+ R+P S K +V+ D ++G+++ +GFVRF +ESE+ RA+T
Sbjct: 241 LFVGDLSASTTEAHLLAFFQKRFPNSIKTVRVMTDPISGKSRCFGFVRFTEESERQRALT 300
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNS 271
EMNGV+ + RP+R+ AT + T + P S+ NS
Sbjct: 301 EMNGVWFAGRPLRVALATPRSTNYRKFSKPNNSHNNS 337
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 52/82 (63%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DPNNTTVFVG L S VT+ L LF +G + +KIP GK CGFV+++ R AE + +
Sbjct: 472 DPNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFVKYSTREEAERTIAAM 531
Query: 339 NGTQLGGQNIRLSWGRSPSNKQ 360
G +GG +RLSWG+ N +
Sbjct: 532 QGFIIGGNRVRLSWGKVSVNNK 553
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQ-------YGQLVHVKIPAGKRC-GFVQFADRSCAEEAL 335
++FVG+L + T+ HL F + +++ I RC GFV+F + S + AL
Sbjct: 240 SLFVGDLSASTTEAHLLAFFQKRFPNSIKTVRVMTDPISGKSRCFGFVRFTEESERQRAL 299
Query: 336 RMLNGTQLGGQNIRLS 351
+NG G+ +R++
Sbjct: 300 TEMNGVWFAGRPLRVA 315
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 160/323 (49%), Gaps = 39/323 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I +T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--ETAGNDPYCFVEFHDDRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKKMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFS 304
AT K PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 ATRKPPA------PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFS 235
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSN 358
+GQ++ +++ K FV+F A A+ +NGT + G ++ WG+ +P
Sbjct: 236 PFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ 295
Query: 359 KQAQ---PDP-NQWNAGYYGYAQ 377
+Q Q P P QW +YG AQ
Sbjct: 296 QQNQIGYPQPYGQWGQ-WYGNAQ 317
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 16/190 (8%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+D T++VG+L+ DVT+ ++ + F P K K++++ T Y FV F D+
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIME--TAGNDPYCFVEFHDDRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ MNG + +++ AT T S Q K +S V + ++ VFVG
Sbjct: 59 AAAALAAMNGRKKMGKEVKVNWAT---TPSSQ----KKDTSSSTVVSTQRSQDHFHVFVG 111
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 112 DLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 171
Query: 343 LGGQNIRLSW 352
LGG+ IR +W
Sbjct: 172 LGGRQIRTNW 181
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F D A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMETAGNDPYC-FVEFHDDRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG + G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKKMGKEVKVNWATTPSSQK 88
>gi|16215602|emb|CAC95017.1| TIAR protein [Xenopus laevis]
Length = 389
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 164/353 (46%), Gaps = 42/353 (11%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG-------- 124
+ GQP RTL++G+L + E + F+ G + K I + G+ G
Sbjct: 2 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKSITEQTDGRRVGASVSFPVL 58
Query: 125 -------YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 59 PNANNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 116
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D T ++KGYGFV F ++ + A+ M
Sbjct: 117 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATSKSKGYGFVSFYNKLDAENAIVHMG 175
Query: 238 GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLD 291
G + R +R AT K PK++ +N+ DD N TV+ G +
Sbjct: 176 GQWLGGRQIRTNWATRKPPA------PKSTQENNTKQLRFDDVVNQSTAKNCTVYCGGIG 229
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
S +T++ +R+ F +GQ++ +++ K F++F+ A A+ +NGT + G ++
Sbjct: 230 SGLTEQLMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCY 289
Query: 352 WGRSP---SNKQAQPDPNQWNAGYYGYAQGY-ENYG-YAAAAPQDPSMYYGGY 399
WG+ + Q D +QW G +G G + YG Y Q PS YG Y
Sbjct: 290 WGKETPDMTKNFQQVDYSQW--GQWGQMYGSPQQYGQYVTNGWQVPS--YGVY 338
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 78/188 (41%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ T + +GYGF+
Sbjct: 100 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATSKSKGYGFV 159
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 160 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFDDVVNQST 217
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF +++ KGY F+RF
Sbjct: 218 AKNCTVYCGGIGSGLTEQLMRQTFGV-------FGQILEIRVFPEKGYSFIRFSTHDSAA 270
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 271 HAIVSVNG 278
>gi|392586871|gb|EIW76206.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 876
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 109/214 (50%), Gaps = 42/214 (19%)
Query: 83 TLWIGDLQYWMDETYLN-TCFAHTGEVVAVKV----IRNKQTGQIEGYGFIEFISRAGAE 137
TLW GDL+ WMDE Y C + V +KV N Q GY F+ F S + A
Sbjct: 183 TLWWGDLEPWMDEEYAKQVCTLMNWDPVNIKVPAGSDANGQHANNPGYCFLTFSSPSVAA 242
Query: 138 RVLQTFN--GTP----MPNGEQNFRLNWASF-----------GAGEKRDDTP-----DHT 175
VL N G P MPN + F +NWA+ AG P +++
Sbjct: 243 SVLNQVNSDGAPQSPTMPNSTKPFTMNWATTMPGACVPSLHSAAGVPLIAQPQQYQKEYS 302
Query: 176 IFVGDLAADVTDYMLQETFRA--------RYP-------STKGAKVVIDRLTGRTKGYGF 220
IFVGDLA + ++ L FR R P S K AK+++D +TG ++GYGF
Sbjct: 303 IFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPVTGVSRGYGF 362
Query: 221 VRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
VRF DE++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 363 VRFTDETDQQRALVEMHGLYCLSRPMRISPATAK 396
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 54/77 (70%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DP NTTVFVG L ++++E LR F+ +G + +VK+P GK CGFVQF ++ AE A+ +
Sbjct: 574 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPIGKHCGFVQFVRKADAERAIEKM 633
Query: 339 NGTQLGGQNIRLSWGRS 355
G +GG IRLSWGRS
Sbjct: 634 QGFPIGGSRIRLSWGRS 650
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K G F++F+ +A AER ++
Sbjct: 579 TVFVGGLSPLISEETLRTFFAPFGDIHYVKVPIGKHCG------FVQFVRKADAERAIEK 632
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 633 MQGFPI--GGSRIRLSW 647
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 146/295 (49%), Gaps = 23/295 (7%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRD---DTP-------DH-TIFVGDL 181
A L NG + E ++NWA+ + +K+ TP DH +FVGDL
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDL 115
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G +
Sbjct: 116 SPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 174
Query: 242 STRPMRIGPATNKKTV--SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 299
R +R AT K S Q+ K V QS P N TV+ G + S +TD+ +
Sbjct: 175 GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLM 232
Query: 300 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 233 RQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 287
>gi|149392334|gb|ABR25993.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 128
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 89/127 (70%), Gaps = 6/127 (4%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQL 343
TV+VG LD V+++ LR+ F++YG + VKIP GK+CGFVQF R+ AEEAL+ LNG+ +
Sbjct: 1 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVI 60
Query: 344 GGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQGYENYGYAAAAPQDPSMY---YGGY 399
G Q +RLSWGRSPS+KQ++ D ++ N YYG Y YGYA+ P P+MY YG Y
Sbjct: 61 GKQAVRLSWGRSPSHKQSRADSGSRRNNMYYG-TPFYGGYGYASPVPH-PNMYAAAYGAY 118
Query: 400 PGYGNYQ 406
P YG+ Q
Sbjct: 119 PVYGSQQ 125
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L FA G+V +VK+ KQ GF++F+SR AE LQ
Sbjct: 1 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQG 54
Query: 143 FNGTPMPNGEQNFRLNW 159
NG+ + G+Q RL+W
Sbjct: 55 LNGSVI--GKQAVRLSW 69
>gi|357626972|gb|EHJ76844.1| tRNA selenocysteine associated protein [Danaus plexippus]
Length = 282
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 100/173 (57%), Gaps = 5/173 (2%)
Query: 86 IGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
+G L+ M E+++ F G+ +AVKV+RNK TG+ GY F+ F + A + N
Sbjct: 1 MGSLEPNMTESFILAAFHRMGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDTMHKLN 60
Query: 145 GTPMPNG--EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
G P+P FRLN AS A + +++VGDL+ADV DY L F A+Y S K
Sbjct: 61 GKPIPGTFPVVRFRLNTASREARANMQQEREFSVWVGDLSADVDDYSLYRVFAAKYSSIK 120
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNK 254
AKV++D +G TKGYGFVRFG+E EQ A+ MNG ++P++I A K
Sbjct: 121 TAKVILDS-SGYTKGYGFVRFGNEDEQRNALYAMNGYTGLGSKPLKICTAVPK 172
>gi|332808237|ref|XP_001141981.2| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Pan
troglodytes]
Length = 255
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 107/176 (60%), Gaps = 35/176 (19%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG A+R
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGP--------------AKR--- 46
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS
Sbjct: 47 -------------FKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSC 91
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKT 256
+G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 92 RGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 146
>gi|66472532|ref|NP_001018445.1| tRNA selenocysteine 1-associated protein 1 [Danio rerio]
gi|82228819|sp|Q503H1.1|TSAP1_DANRE RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=tRNA selenocysteine-associated protein 1
gi|63102413|gb|AAH95331.1| Zgc:110606 [Danio rerio]
gi|182888884|gb|AAI64339.1| Zgc:110606 protein [Danio rerio]
Length = 314
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 107/189 (56%), Gaps = 11/189 (5%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +LW+G+L+ +MDE ++ FA GE VV +++IR+K TG+ GYGF+E ER
Sbjct: 1 MNSLWMGNLEPYMDEDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERC 60
Query: 140 LQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
L+ NG P+P + F+L+ +++G K+ ++ ++FV DL DV D ML E F
Sbjct: 61 LRKVNGKPLPGATPPKRFKLSRSNYG---KQGESSTFSLFVSDLTPDVDDGMLYEFFHYH 117
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPAT---N 253
+ S K+V+D G +K GFV F E EQ RA+ ++ G + +R+ A+ N
Sbjct: 118 FSSCCSGKIVLDA-NGHSKCCGFVSFESEREQKRALVDLQGATGLGKKALRLSLASSRVN 176
Query: 254 KKTVSGQQQ 262
KK S + Q
Sbjct: 177 KKKESSENQ 185
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
+++++G+L + + + F + +++ D++TG+ GYGFV D++ R +
Sbjct: 2 NSLWMGNLEPYMDEDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERCL 61
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSI 293
++NG +P+ G K+ + Y K + + ++FV +L
Sbjct: 62 RKVNG-----KPLP-GATPPKRFKLSRSNYGKQG-----------ESSTFSLFVSDLTPD 104
Query: 294 VTDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQ 346
V D L E F + G++V K CGFV F + AL L G T LG +
Sbjct: 105 VDDGMLYEFFHYHFSSCCSGKIVLDANGHSKCCGFVSFESEREQKRALVDLQGATGLGKK 164
Query: 347 NIRLSWGRSPSNKQAQPDPNQ 367
+RLS S NK+ + NQ
Sbjct: 165 ALRLSLASSRVNKKKESSENQ 185
>gi|225713880|gb|ACO12786.1| Nucleolysin TIAR [Lepeophtheirus salmonis]
Length = 352
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 140/287 (48%), Gaps = 19/287 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F G V K+IR G + Y F+EF A A L
Sbjct: 11 RTLYVGNLDVAVTEDLVLALFGQLGAVKGCKIIRE---GASDPYCFVEFAHPASAAAALT 67
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGE----------KRDDTPDHTIFVGDLAADVTDYMLQ 191
N E ++NWAS G K D + H IFVGDL+ D+T L+
Sbjct: 68 AMNKRICLGKE--MKVNWASSPGGSSDSVVHHNLPKPDTSQHHHIFVGDLSPDITTETLK 125
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
F + KVV D LT ++KGYGFV F ++++ A+ +MNG + +R +R A
Sbjct: 126 NVF-VPFGEISDYKVVKDMLTNKSKGYGFVSFVEKNDAQTAIEQMNGQWLGSRAIRTNWA 184
Query: 252 TNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH-LRELFSQYGQLV 310
K + + N + P N TV+ G L I +DE+ +R+ FS +G+++
Sbjct: 185 ARKPPAPYSKDTSNVNKLNFEDVYRQASPRNFTVYCGGL--INSDENIIRQTFSPFGRIL 242
Query: 311 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
++ K FV+F ++ A A+ L+G+ + GQ+++ SWG+ +
Sbjct: 243 EIRYFRDKGYAFVRFDNKESACNAIVALHGSNVQGQSVKCSWGKEST 289
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 159/333 (47%), Gaps = 31/333 (9%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK--------------- 117
+ GQP RTL++G+L + E + F+ G + K+I +
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVL 59
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TI 176
Q + Y F+EF A L NG + E ++NWA+ + +K+ +H +
Sbjct: 60 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKILPVNHFHV 117
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
FVGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 118 FVGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 176
Query: 237 NGVFCSTRPMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
G + R +R AT K S Q+ K V QS P N TV+ G + S +
Sbjct: 177 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGL 234
Query: 295 TDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
TD+ +R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 235 TDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 294
Query: 355 -SPSNKQA--QPDPNQWN--AGYYGYAQGYENY 382
SP + Q D +QW + YG Q Y Y
Sbjct: 295 ESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQY 327
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 161/339 (47%), Gaps = 35/339 (10%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK---------------QTGQIEGYGFIE 129
++G+L + E + F+ G + K+I + Q + Y F+E
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
F A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTED 118
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R
Sbjct: 119 IKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 177
Query: 250 PATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 307
AT K S Q+ K V QS P N TV+ G + S +TD+ +R+ FS +G
Sbjct: 178 WATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQTFSPFG 235
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPD 364
Q++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D
Sbjct: 236 QIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVD 295
Query: 365 PNQWNAGYYGYAQGYEN---YG-YAAAAPQDPSMYYGGY 399
+QW ++Q Y N YG Y A Q PS YG Y
Sbjct: 296 YSQWGQ----WSQVYGNPQQYGQYMANGWQVPS--YGMY 328
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 90 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 149
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 150 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 207
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 208 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 260
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 261 HAIVSVNGT 269
>gi|395507384|ref|XP_003758005.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Sarcophilus harrisii]
Length = 394
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 145/289 (50%), Gaps = 28/289 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 VMYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAA 64
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYMLQ 191
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T ++
Sbjct: 65 MNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIK 122
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R A
Sbjct: 123 AAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 181
Query: 252 TNKKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQ 305
T K PK++Y+++ S DD P+N TV+ G + S +T++ +R+ FS
Sbjct: 182 TRKPPA------PKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSP 235
Query: 306 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+GQ++ +++ K FV+F A A+ +NGT + G ++ WG+
Sbjct: 236 FGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 284
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 161/339 (47%), Gaps = 35/339 (10%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK---------------QTGQIEGYGFIE 129
++G+L + E + F+ G + K+I + Q + Y F+E
Sbjct: 15 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 74
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
F A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T
Sbjct: 75 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTED 132
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R
Sbjct: 133 IKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 191
Query: 250 PATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 307
AT K S Q+ K V QS P N TV+ G + S +TD+ +R+ FS +G
Sbjct: 192 WATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQTFSPFG 249
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPD 364
Q++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D
Sbjct: 250 QIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVD 309
Query: 365 PNQWNAGYYGYAQGYEN---YG-YAAAAPQDPSMYYGGY 399
+QW ++Q Y N YG Y A Q PS YG Y
Sbjct: 310 YSQWGQ----WSQVYGNPQQYGQYMANGWQVPS--YGMY 342
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+ F
Sbjct: 106 PSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSF 165
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDDTP 172
++ AE + G + G + R NWA+ F +
Sbjct: 166 YNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPK 223
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF A
Sbjct: 224 NCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAAHA 276
Query: 233 MTEMNG 238
+ +NG
Sbjct: 277 IVSVNG 282
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 137/274 (50%), Gaps = 25/274 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V +++V R+ T GY ++ F ++ ++
Sbjct: 41 SLYVGDLDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKKAIEK 100
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ + R+ W+ ++ + + IF+ +L +D+ + L +TF + +
Sbjct: 101 LNYTPIKG--RLCRIMWSQRDPALRKKGSAN--IFIKNLHSDIDNKALYDTFSV-FGNIL 155
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
+K+ D TG++KG+GFV F D++ A+ +NG+ + + + +GP ++K Q +
Sbjct: 156 SSKIATDE-TGKSKGFGFVHFEDDTAAKEAIDALNGMLLNGQEIFVGPHLSRKERDSQLE 214
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG----- 317
KA++ T ++V N++ TDE ELFS+YG+++ +
Sbjct: 215 ESKANF--------------TNIYVKNINLETTDEEFTELFSKYGKVLSAALEKTEDGKL 260
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
K GFV F + A +A+ LNG+Q Q + +S
Sbjct: 261 KGFGFVDFENHEDAAKAVEELNGSQFKDQELFVS 294
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 23/265 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ K+ + +TG+ +G+GF+ F A+ +
Sbjct: 130 IFIKNLHSDIDNKALYDTFSVFGNILSSKIATD-ETGKSKGFGFVHFEDDTAAKEAIDAL 188
Query: 144 NGTPMPNGEQNF---RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG + NG++ F L+ + + I+V ++ + TD E F
Sbjct: 189 NGMLL-NGQEIFVGPHLSRKERDSQLEESKANFTNIYVKNINLETTDEEFTELF------ 241
Query: 201 TKGAKVVIDRLT----GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+K KV+ L G+ KG+GFV F + + +A+ E+NG + + + A K
Sbjct: 242 SKYGKVLSAALEKTEDGKLKGFGFVDFENHEDAAKAVEELNGSQFKDQELFVSRAQKKYE 301
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-- 314
+ Q K Y+ S++ + +F+ NLD + DE L+E F+ YG + V++
Sbjct: 302 ---RMQELKKQYEASRLEKMAK-YQGVNLFIKNLDDSIDDEKLKEEFAPYGNITSVRVMR 357
Query: 315 -PAGKRCGFVQFADRSCAEEALRML 338
GK GF F S EEA + +
Sbjct: 358 TENGKSRGF-GFVCFSTPEEATKAI 381
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 36/205 (17%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VGDL V++ +L + F + S +V D +T + GY +V F D +A+
Sbjct: 41 SLYVGDLDPSVSEALLYDIF-SPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKKAIE 99
Query: 235 EMN-----GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGN 289
++N G C + PA KK + +F+ N
Sbjct: 100 KLNYTPIKGRLCRIMWSQRDPALRKK-------------------------GSANIFIKN 134
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQLG 344
L S + ++ L + FS +G ++ KI K GFV F D + A+EA+ LNG L
Sbjct: 135 LHSDIDNKALYDTFSVFGNILSSKIATDETGKSKGFGFVHFEDDTAAKEAIDALNGMLLN 194
Query: 345 GQNIRLSWGRSPSNKQAQPDPNQWN 369
GQ I + S + +Q + ++ N
Sbjct: 195 GQEIFVGPHLSRKERDSQLEESKAN 219
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 84/190 (44%), Gaps = 17/190 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++ ++ + F+ G+V++ + + G+++G+GF++F + A + ++
Sbjct: 223 IYVKNINLETTDEEFTELFSKYGKVLSA-ALEKTEDGKLKGFGFVDFENHEDAAKAVEEL 281
Query: 144 NGTPMPNGE-------------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYML 190
NG+ + E Q + + + EK +F+ +L + D L
Sbjct: 282 NGSQFKDQELFVSRAQKKYERMQELKKQYEA-SRLEKMAKYQGVNLFIKNLDDSIDDEKL 340
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+E F A Y + +V+ G+++G+GFV F E +A+TE N + +P+ +
Sbjct: 341 KEEF-APYGNITSVRVMRTE-NGKSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 398
Query: 251 ATNKKTVSGQ 260
A K Q
Sbjct: 399 AQRKDVRRSQ 408
>gi|47217530|emb|CAG02457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 418
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 137/276 (49%), Gaps = 17/276 (6%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F G + K+I + T + Y F+EF A L N
Sbjct: 15 YVGNLSRDVTEPLILQVFTQIGPCKSCKMIVD--TAGNDPYCFVEFYEHRHAAASLAAMN 72
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G + E ++NWA+ +K+D + +FVGDL+ ++T ++ F + A
Sbjct: 73 GRKIMGKE--VKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAF-GPFGRISDA 129
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP 264
+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K P
Sbjct: 130 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA------P 183
Query: 265 KASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 318
K +Y+++ DD P+N TV+ G + + +T++ +R+ FS +G ++ +++ K
Sbjct: 184 KTTYESNSKQLCFDDVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPDK 243
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
FV+F A A+ +NG+ + G ++ WG+
Sbjct: 244 GYSFVRFNSHESAAHAIVSVNGSSIEGHVVKCYWGK 279
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P Q+ +++GDL + + F G + +V+++ TG+ +GYGF+
Sbjct: 88 TPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVS 147
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWA---------SFGAGEKR---DDTPDH--- 174
F ++ AE +Q G + G + R NWA ++ + K+ DD +
Sbjct: 148 FFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKTTYESNSKQLCFDDVVNQSSP 205
Query: 175 ---TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
T++ G ++ +T+ ++++TF P +++ KGY FVRF
Sbjct: 206 SNCTVYCGGVSTGLTEQLMRQTFSPFGP-------IMEIRVFPDKGYSFVRFNSHESAAH 258
Query: 232 AMTEMNG 238
A+ +NG
Sbjct: 259 AIVSVNG 265
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAEEALRMLNG 340
+VGNL VT+ + ++F+Q G K+ AG C FV+F + A +L +NG
Sbjct: 15 YVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYC-FVEFYEHRHAAASLAAMNG 73
Query: 341 TQLGGQNIRLSWGRSPSNKQ 360
++ G+ ++++W +P++++
Sbjct: 74 RKIMGKEVKVNWATTPTSQK 93
>gi|354500962|ref|XP_003512565.1| PREDICTED: nucleolysin TIAR [Cricetulus griseus]
Length = 336
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 130/263 (49%), Gaps = 8/263 (3%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 68
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 69 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 127
Query: 245 PMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
+R AT K Q + + P N TV+ G + S +TD+ +R+ FS
Sbjct: 128 QIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 187
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA-- 361
+GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 188 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQ 247
Query: 362 QPDPNQWN--AGYYGYAQGYENY 382
Q D +QW + YG Q Y Y
Sbjct: 248 QVDYSQWGQWSQVYGNPQQYGQY 270
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 45 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 104
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 105 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSS 162
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 163 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 215
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 216 HAIVSVNGT 224
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 130/263 (49%), Gaps = 8/263 (3%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 85
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 86 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 144
Query: 245 PMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
+R AT K Q + + P N TV+ G + S +TD+ +R+ FS
Sbjct: 145 QIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 204
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA-- 361
+GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 205 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQ 264
Query: 362 QPDPNQWN--AGYYGYAQGYENY 382
Q D +QW + YG Q Y Y
Sbjct: 265 QVDYSQWGQWSQVYGNPQQYGQY 287
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 62 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 121
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 122 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSS 179
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF S G + I KGY FVRF
Sbjct: 180 PKNCTVYCGGIASGLTDQLMRQTF-----SPFGQIMEIRVFP--EKGYSFVRFSTHESAA 232
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 233 HAIVSVNGT 241
>gi|17537143|ref|NP_496718.1| Protein TIAR-2 [Caenorhabditis elegans]
gi|6425313|emb|CAB60356.1| Protein TIAR-2 [Caenorhabditis elegans]
Length = 434
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 138/295 (46%), Gaps = 28/295 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++ +L + + +L T F G V+ K+I G + Y F+EF A LQ
Sbjct: 40 RTLFVANLDPAITDEFLATLFNQIGAVMKAKIIF---EGLNDPYAFVEFSDHNQATLALQ 96
Query: 142 TFNGTPMPNGEQNFRLNWASF----GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ NG + E+ + WA G + +T H +FVGDL +++ L+E F
Sbjct: 97 SHNGRELL--EKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAF-V 153
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-- 254
++ AK++ D T + KGYGFV + + RA+ EMNG + R +R AT K
Sbjct: 154 KFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPD 213
Query: 255 ---------KTVSGQQQYPKASYQNSQVAQSDDDPN-----NTTVFVGNLDSIVTDEHLR 300
G + Y N D+ N NT+V+VGN+ ++ DE +R
Sbjct: 214 EDGERGGDRGDRRGGGGGGRDRYHNQSEKTYDEIFNQAAADNTSVYVGNIANLGEDE-IR 272
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
F ++G + V+ + FV+F + A A+ +N +GGQ +R SWG+S
Sbjct: 273 RAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSWGKS 327
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 77 QPGEIRT---------LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
+PGE R+ +++GDL +D T L F GEV K+IR+ T + +GYGF
Sbjct: 118 EPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGF 177
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161
+ + R AER + NG + G + R NWA+
Sbjct: 178 VSYPRREDAERAIDEMNGAWL--GRRTIRTNWAT 209
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 136/286 (47%), Gaps = 28/286 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F G V + K+IR + + Y FIE+ S A+ L
Sbjct: 8 KTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASS---DPYAFIEYASHQSAQTALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRLFLKKE--IKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRK------ 175
Query: 261 QQYPKASYQNSQVAQS-----------DDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQ 308
P A +N++ +S + P NTTV+ G + ++D ++ F Q+G
Sbjct: 176 ---PPAPRENTKGIKSGKTPGFEEIYNNTGPTNTTVYCGGFPPNTISDNLIKTHFGQFGS 232
Query: 309 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 233 IHDVRVFKDKGYAFIKFISKEAAARAIEGTHNSEVQGHPVKCYWGK 278
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 334
D+ T++VGNLD VT++ L LF Q G + KI + F+++A A+ A
Sbjct: 3 DEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYASHQSAQTA 62
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 374
L +N + I+++W SP N Q + D +Q + + G
Sbjct: 63 LAAMNKRLFLKKEIKVNWATSPGN-QPKTDTSQHHHIFVG 101
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 138/282 (48%), Gaps = 51/282 (18%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E RTL++G+L + E ++ T F G V KVI ++
Sbjct: 44 EPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE---------------------- 81
Query: 140 LQTFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRAR 197
++NWA G + + DT H +FVGDL+++V + L+E F+
Sbjct: 82 ---------------MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP- 125
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K
Sbjct: 126 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK--- 182
Query: 258 SGQQQ----YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
G Q+ Y + SY S D NT+V+VGN+ S+ DE +R+ F+ +G++ V+
Sbjct: 183 PGDQEKPSHYNEKSYDEIYNQTSGD---NTSVYVGNIASLTEDE-IRQGFASFGRITEVR 238
Query: 314 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
I + FV+F ++ A +A+ +N +GGQ +R SWG++
Sbjct: 239 IFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKT 280
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 32/187 (17%)
Query: 71 PPQQQGQPGEIRT--LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P QQQ + R +++GDL +D L F G+V KVIR+ T + +GYGF+
Sbjct: 90 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 149
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------- 174
+ R AER ++ NG + G + R NWA+ G++ + P H
Sbjct: 150 SYPKREEAERAIEQMNGQWL--GRRTIRTNWATRKPGDQ--EKPSHYNEKSYDEIYNQTS 205
Query: 175 ----TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+++VG++A+ +T+ +++ F A + ++ + +GY FV+F ++
Sbjct: 206 GDNTSVYVGNIAS-LTEDEIRQGF-ASFGRITEVRIF------KMQGYAFVKFDNKDAAA 257
Query: 231 RAMTEMN 237
+A+ +MN
Sbjct: 258 KAIVQMN 264
>gi|327267754|ref|XP_003218664.1| PREDICTED: nucleolysin TIAR-like [Anolis carolinensis]
Length = 342
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 129/263 (49%), Gaps = 8/263 (3%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 68
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 69 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 127
Query: 245 PMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
+R AT K Q + + P N TV+ G + S +TD+ +R+ FS
Sbjct: 128 QIRTNWATRKPPAPKTTQESTTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 187
Query: 305 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA-- 361
+GQ++ + GK FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 188 PFGQILETRAFPGKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQ 247
Query: 362 QPDPNQWN--AGYYGYAQGYENY 382
Q D +QW + YG Q Y Y
Sbjct: 248 QVDYSQWGQWSQVYGNPQQYGQY 270
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 45 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 104
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 105 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKTTQESTTKQLRFEDVVNQSS 162
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF S G + G KGY FVRF
Sbjct: 163 PKNCTVYCGGIASGLTDQLMRQTF-----SPFGQILETRAFPG--KGYSFVRFSTHESAA 215
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 216 HAIVSVNGT 224
>gi|356502327|ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
Length = 616
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 143/278 (51%), Gaps = 29/278 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL+ +DE L FA G + +++V R+ +T + GY ++ F++ A ++
Sbjct: 7 SLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRD-ETNRSLGYAYVNFVNPQDAANAMEH 65
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG ++ R+ +++ ++ + +F+ +L + + L +TF A +
Sbjct: 66 LNFTPL-NG-KSIRVMFSNRDPSIRKSGYAN--VFIKNLDISIDNKTLHDTFAA-FGFVL 120
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
+KV +D + G++KGYGFV+F +E A+ E+NG+ + + + +G N++
Sbjct: 121 SSKVAVDSI-GQSKGYGFVQFDNEESAQNAIKELNGMLINDKKVYVGLFVNRQ------- 172
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPAGK- 318
+ AQ D P T V+V N TDE L +LFS YG + V +K GK
Sbjct: 173 ---------ERAQVDGSPKFTNVYVKNFSETYTDEDLEQLFSTYGTITSAVVMKDTDGKS 223
Query: 319 RC-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
RC GFV F A A+ LNGT + + L GR+
Sbjct: 224 RCFGFVNFESPDSAVAAVERLNGTTVNDDKV-LYVGRA 260
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 145/286 (50%), Gaps = 15/286 (5%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G V++ KV + GQ +GYGF++F + A+ ++
Sbjct: 94 NVFIKNLDISIDNKTLHDTFAAFGFVLSSKVAVDS-IGQSKGYGFVQFDNEESAQNAIKE 152
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPST 201
NG + N ++ + + + + D +P T ++V + + TD L++ F + Y +
Sbjct: 153 LNGM-LINDKKVYVGLFVNRQERAQVDGSPKFTNVYVKNFSETYTDEDLEQLF-STYGTI 210
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST-RPMRIGPATNKKTVSGQ 260
A VV+ G+++ +GFV F + A+ +NG + + + +G A K + +
Sbjct: 211 TSA-VVMKDTDGKSRCFGFVNFESPDSAVAAVERLNGTTVNDDKVLYVGRAQRK---AER 266
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG 317
+ KA ++ ++ + + + T ++V NLD + D+ L+ELFS++G + K+ P G
Sbjct: 267 EAELKARFELERIRKYEK-YHGTNLYVKNLDYNINDDKLKELFSEFGTITSCKVMLEPNG 325
Query: 318 --KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
K GFV F+ A AL +NG +G + + ++ + ++A
Sbjct: 326 RSKGYGFVAFSAPRNANRALHEMNGKMIGRRPLYVAVAQRKEERKA 371
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCG--FVQFADRSCAEEALR 336
N +++VG+L+ V + L +LF++ G + +++ + G +V F + A A+
Sbjct: 5 NASLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRDETNRSLGYAYVNFVNPQDAANAME 64
Query: 337 MLNGTQLGGQNIRLSWG-RSPSNKQA 361
LN T L G++IR+ + R PS +++
Sbjct: 65 HLNFTPLNGKSIRVMFSNRDPSIRKS 90
>gi|413920411|gb|AFW60343.1| putative oligouridylate binding protein [Zea mays]
Length = 425
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 141/284 (49%), Gaps = 23/284 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + +T L F G V K+IR +++ +GFI++ R A +
Sbjct: 119 RSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYAALAIL 174
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + Q ++NWA R+DT H IFVGDL +VTD L F Y +
Sbjct: 175 SLNGRQLYG--QPIKVNWAY--TSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSG-YST 229
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A+V+ D+ TGR++G+GFV F ++ + A+ ++NG + R +R AT +
Sbjct: 230 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGEE 289
Query: 261 QQY--PKASYQNSQVAQSDDDPNN---------TTVFVGNL--DSIVTDEHLRELFSQYG 307
+Q K N ++PN TTV+VGNL ++ + D HL G
Sbjct: 290 KQILDTKVDLSNGSSESGKENPNEDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSLGAG 349
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
+ V++ K GFV+++ A A++M NG +GG+ I+ S
Sbjct: 350 SIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKSS 393
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +LQE F++ P +G K++ +GF+ + D
Sbjct: 114 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGP-VEGCKLI----RKEKSSFGFIDYYDRRY 168
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ +NG +P+++ A P+ +D + +FVG
Sbjct: 169 AALAILSLNGRQLYGQPIKVNWAYTST--------PR-----------EDTSGHFNIFVG 209
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQ 342
+L VTD L FS Y ++ ++ G FV F ++ A+ A+ LNG
Sbjct: 210 DLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKW 269
Query: 343 LGGQNIRLSWGRSPSN 358
LG + IR +W +N
Sbjct: 270 LGNRQIRCNWATKGAN 285
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 12/265 (4%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 85
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 86 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 144
Query: 245 PMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
+R AT K S Q+ K V QS P N TV+ G + S +TD+ +R+
Sbjct: 145 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQT 202
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA 361
FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 203 FSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKN 262
Query: 362 --QPDPNQWN--AGYYGYAQGYENY 382
Q D +QW + YG Q Y Y
Sbjct: 263 FQQVDYSQWGQWSQVYGNPQQYGQY 287
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 62 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 121
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 122 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 179
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 180 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 232
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 233 HAIVSVNGT 241
>gi|281351637|gb|EFB27221.1| hypothetical protein PANDA_001198 [Ailuropoda melanoleuca]
Length = 245
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 6/136 (4%)
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDL 181
GY F+EF A AE+ L NG P+P + F+LN+A++G ++ D++P++++FVGDL
Sbjct: 4 GYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDL 61
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VF 240
DV D ML E F YPS +G KVV+D+ TG +KGYGFV+F DE EQ RA++E G V
Sbjct: 62 TPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALSECQGAVG 120
Query: 241 CSTRPMRIGPATNKKT 256
++P+R+ A K +
Sbjct: 121 LGSKPVRLSVAIPKAS 136
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 23/142 (16%)
Query: 217 GYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQS 276
GY FV F D + + + ++NG +P+ G K+ Y K Q
Sbjct: 4 GYCFVEFADLATAEKCLHKING-----KPLP-GATPAKRFKLNYATYGK---------QP 48
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSC 330
D+ P ++FVG+L V D L E F + G++V + K GFV+F D
Sbjct: 49 DNSP-EYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELE 107
Query: 331 AEEALRMLNG-TQLGGQNIRLS 351
+ AL G LG + +RLS
Sbjct: 108 QKRALSECQGAVGLGSKPVRLS 129
>gi|268578407|ref|XP_002644186.1| Hypothetical protein CBG17168 [Caenorhabditis briggsae]
Length = 244
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 102/180 (56%), Gaps = 7/180 (3%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+FVGDL+ DV++ +L+ TF+ ++ AKV+ D T ++KGYGFV F ++ A++
Sbjct: 7 VFVGDLSKDVSNELLKSTFQ-KFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAISG 65
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 295
MNG + R +R A K + + + NS A +NT+V+VGN+ T
Sbjct: 66 MNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA------DNTSVYVGNISPQTT 119
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
D LR+ FS YG + V++ +R FV++ + CA +A+ +NG +L G +R SWGR+
Sbjct: 120 DVDLRDSFSTYGDIAEVRVFKTQRYAFVRYEKKECATKAIMEMNGKELAGNQVRCSWGRT 179
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 21/167 (12%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + L + F GEV KVIR+ QT + +GYGF+ F ++ AE +
Sbjct: 7 VFVGDLSKDVSNELLKSTFQKFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAISGM 66
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDD-----------TPDHT-IFVGDLAADVTDYMLQ 191
NG + G++ R NWA+ E+ D D+T ++VG+++ TD L+
Sbjct: 67 NGKWI--GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISPQTTDVDLR 124
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
++F + Y +V +T+ Y FVR+ + +A+ EMNG
Sbjct: 125 DSF-STYGDIAEVRVF------KTQRYAFVRYEKKECATKAIMEMNG 164
>gi|170029244|ref|XP_001842503.1| RNA-binding post-transcriptional regulator csx1 [Culex
quinquefasciatus]
gi|167881606|gb|EDS44989.1| RNA-binding post-transcriptional regulator csx1 [Culex
quinquefasciatus]
Length = 326
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 98/175 (56%), Gaps = 5/175 (2%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE VK++RNK TG GY F+ F + A +
Sbjct: 8 LWMGSLESYMTEAFILAAFRKMGEDPSTVKLMRNKYTGDPAGYCFVSFKTDDAALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG P+P N FRLN A+ + +++VGDL++DV DY L F +Y S
Sbjct: 68 LNGKPIPGTNPLVRFRLNSATNNQHRALLADREFSVWVGDLSSDVDDYSLYRVFSTKYTS 127
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNK 254
K AKV++D +G +KGYGFV+FG E EQ A+ +MNG ++P++I A K
Sbjct: 128 IKTAKVILDS-SGFSKGYGFVKFGLEDEQKNALYDMNGFIGLGSKPLKICNAVPK 181
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 33/188 (17%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR K++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTEAFILAAFRKMGEDPSTVKLMRNKYTGDPAGYCFVSFKTDDAALDAMHK 67
Query: 236 MNGV-FCSTRPM---RIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGN 289
+NG T P+ R+ ATN + + +++ +V+VG+
Sbjct: 68 LNGKPIPGTNPLVRFRLNSATNNQHRALLADREF--------------------SVWVGD 107
Query: 290 LDSIVTDEHLRELFS-QYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQ 342
L S V D L +FS +Y + K+ K GFV+F + AL +NG
Sbjct: 108 LSSDVDDYSLYRVFSTKYTSIKTAKVILDSSGFSKGYGFVKFGLEDEQKNALYDMNGFIG 167
Query: 343 LGGQNIRL 350
LG + +++
Sbjct: 168 LGSKPLKI 175
>gi|119569772|gb|EAW49387.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Homo sapiens]
Length = 336
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 12/265 (4%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 68
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 69 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 127
Query: 245 PMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
+R AT K S Q+ K V QS P N TV+ G + S +TD+ +R+
Sbjct: 128 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQT 185
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA 361
FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 186 FSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKN 245
Query: 362 --QPDPNQWN--AGYYGYAQGYENY 382
Q D +QW + YG Q Y Y
Sbjct: 246 FQQVDYSQWGQWSQVYGNPQQYGQY 270
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 45 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 104
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 105 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 162
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 163 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 215
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 216 HAIVSVNGT 224
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 131/275 (47%), Gaps = 17/275 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E L F+ G V K+IR + Y F+EF + A L
Sbjct: 80 RTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGN---DPYAFVEFTNHQCAATALA 136
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 137 AMNKRSFL--EKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 193
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
++V D T ++KGY FV F +SE A+ MNG + +R +R +T K
Sbjct: 194 ISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRS 253
Query: 261 QQYPKASYQNSQVAQSDDDPN-NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 319
++ + ++ PN ++ G + +TDE +++ FS +G + +++ K
Sbjct: 254 ERPRHS---------NNSKPNYEEVLYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDKG 304
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
F++F + A A+ + T++ G ++ WG+
Sbjct: 305 YAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGK 339
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 34/206 (16%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL ++ L FA GE+ +++R+ QT + +GY F+ F+ ++ AE +
Sbjct: 170 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAM 229
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----------IFVGDLAADVTDYMLQET 193
NG + G ++ R NW++ R + P H+ ++ G +TD ++++T
Sbjct: 230 NGQWL--GSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVLYCGGFTNGITDELIKKT 287
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM-----TEMNG--VFC----- 241
F + + + + +V D KGY F++F + A+ TE+NG V C
Sbjct: 288 F-SPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKE 340
Query: 242 STRPMRIGPATN---KKTVSGQQQYP 264
+ P +GP N ++ +G QYP
Sbjct: 341 NGDPNSVGPNANHQAQQVTAGAGQYP 366
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKG---YGFVRFGD 225
+++ T++VG+L V++ +L F ++ + KG K++ R G Y FV F +
Sbjct: 75 EESNPRTLYVGNLDTTVSEDLLCALF-SQIGAVKGCKII------REPGNDPYAFVEFTN 127
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTV 285
A+ MN + M++ AT+ G Q PK D N+ +
Sbjct: 128 HQCAATALAAMNKRSFLEKEMKVNWATS----PGNQ--PKL-----------DTSNHHHI 170
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLN 339
FVG+L + + L+E F+ +G++ + +I K FV F +S AE A+ +N
Sbjct: 171 FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMN 230
Query: 340 GTQLGGQNIRLSW 352
G LG ++IR +W
Sbjct: 231 GQWLGSRSIRTNW 243
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 274 AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSC 330
A ++ N T++VGNLD+ V+++ L LFSQ G + KI P FV+F + C
Sbjct: 71 ANMSEESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQC 130
Query: 331 AEEALRMLNGTQLGGQNIRLSWGRSPSNK 359
A AL +N + ++++W SP N+
Sbjct: 131 AATALAAMNKRSFLEKEMKVNWATSPGNQ 159
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 145/292 (49%), Gaps = 29/292 (9%)
Query: 56 WATQAAA-PQAAGVAVPPQQQGQPGEIRT-LWIGDLQYWMDETYLNTCFAHTGEVVAVKV 113
ATQ A PQ A + P G + T L++GDL + ++ L F G+VV+V+V
Sbjct: 1 MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
Query: 114 IRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD 173
R+ T + GYG++ + + A R L N TP+ NG+ R+ ++ ++ +
Sbjct: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPL-NGKP-IRVMYSHRDPSIRKSGAGN 118
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
IF+ +L + L +TF A + S KV +D +G++KGYGFV+F +E L+A+
Sbjct: 119 --IFIKNLDKAIDHKALHDTFSA-FGSILSCKVALDS-SGQSKGYGFVQFDNEESALKAI 174
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSI 293
++NG+ + + + +GP K+ G K+ + N VFV NL
Sbjct: 175 EKLNGMLLNDKQVYVGPFLRKQERDG--VVDKSKFNN--------------VFVKNLSET 218
Query: 294 VTDEHLRELFSQYGQLVHVKI---PAGK-RC-GFVQFADRSCAEEALRMLNG 340
T+E L + FS++G L + + GK RC GFV F + A A+ LNG
Sbjct: 219 TTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFENADDAARAVDTLNG 270
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 142/288 (49%), Gaps = 20/288 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ F+ G +++ KV + +GQ +GYGF++F + A + ++
Sbjct: 119 IFIKNLDKAIDHKALHDTFSAFGSILSCKVALD-SSGQSKGYGFVQFDNEESALKAIEKL 177
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARYP 199
NG + N +Q + F ++RD D + +FV +L+ T+ L + F
Sbjct: 178 NGMLL-NDKQVY---VGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEF-- 231
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
T + VV+ G+++ +GFV F + + RA+ +NG + +G A K S
Sbjct: 232 GTLTSIVVMRDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKK---SE 288
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PA 316
++ K ++ + + ++ D +++ NLD + D+ L+ELF+ +G + K+ P
Sbjct: 289 REVELKHRFEQT-MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPN 347
Query: 317 G--KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
G + GFV F+ A AL +NG + + + ++ + +++A+
Sbjct: 348 GISRGSGFVAFSTPDEASRALVEMNGKMVVSKPLYVALAQRKEDRRAR 395
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 27/194 (13%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L E LN F+ G + ++ V+R+ G+ +GF+ F + A R
Sbjct: 206 KFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDAD-GKSRCFGFVNFENADDAARA 264
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEK--RDDTPDH----------------TIFVGDL 181
+ T NG + + E W A +K R+ H +++ +L
Sbjct: 265 VDTLNGKLVDDKE------WYVGKAQKKSEREVELKHRFEQTMKEAADKYQGANLYIKNL 318
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ D L+E F A + + KV+ D G ++G GFV F E RA+ EMNG
Sbjct: 319 DDSIGDDKLKELF-APFGTITSCKVMRDP-NGISRGSGFVAFSTPDEASRALVEMNGKMV 376
Query: 242 STRPMRIGPATNKK 255
++P+ + A K+
Sbjct: 377 VSKPLYVALAQRKE 390
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGKRC---GFVQFADRSCAEEALR 336
T+++VG+LD VTD L ++F+Q GQ+V V++ +R G+V +++ A AL
Sbjct: 29 TSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALD 88
Query: 337 MLNGTQLGGQNIRLSWG-RSPSNKQA 361
+LN T L G+ IR+ + R PS +++
Sbjct: 89 VLNFTPLNGKPIRVMYSHRDPSIRKS 114
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 12/265 (4%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 56 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 113
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 114 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 172
Query: 245 PMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
+R AT K S Q+ K V QS P N TV+ G + S +TD+ +R+
Sbjct: 173 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQT 230
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA 361
FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 231 FSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKN 290
Query: 362 --QPDPNQWN--AGYYGYAQGYENY 382
Q D +QW + YG Q Y Y
Sbjct: 291 FQQVDYSQWGQWSQVYGNPQQYGQY 315
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 90 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 149
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 150 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 207
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 208 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 260
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 261 HAIVSVNG 268
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 12/265 (4%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 56 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 113
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 114 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 172
Query: 245 PMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
+R AT K S Q+ K V QS P N TV+ G + S +TD+ +R+
Sbjct: 173 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQT 230
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA 361
FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 231 FSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKN 290
Query: 362 --QPDPNQWN--AGYYGYAQGYENY 382
Q D +QW + YG Q Y Y
Sbjct: 291 FQQVDYSQWGQWSQVYGNPQQYGQY 315
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 90 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 149
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 150 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 207
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 208 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 260
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 261 HAIVSVNG 268
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 136/300 (45%), Gaps = 39/300 (13%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPGN---DPYAFIEYSTYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFLDKE--IKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+T MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAITAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 -------------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIV 294
V G Q++ N P NTTV+ G +++
Sbjct: 181 PNKGGGQGGGMGGGPGGNGSGVKGSQRHTFEEVYN------QSSPTNTTVYCGGFPPNVI 234
Query: 295 TDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+D+ + + F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 235 SDDLMHKHFVQFGPIQDVRVFKDKGFAFIKFVTKEAAARAIEHTHNSEVHGNQVKCFWGK 294
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 334
D+ T++VGNLDS V+++ L LFS G + KI P F++++ A A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPGNDPYAFIEYSTYQAATTA 61
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNK 359
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLDKEIKVNWATSPGNQ 86
>gi|260942869|ref|XP_002615733.1| hypothetical protein CLUG_04615 [Clavispora lusitaniae ATCC 42720]
gi|238851023|gb|EEQ40487.1| hypothetical protein CLUG_04615 [Clavispora lusitaniae ATCC 42720]
Length = 462
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 138/303 (45%), Gaps = 35/303 (11%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+GDL E + + GE AVK+IR+K G+ + Y F+ F S +
Sbjct: 80 LWMGDLDPQWTEASIADLWKQMGEEPTAVKIIRDK-MGKSQ-YCFVTFPSSNAVASAISK 137
Query: 143 FNGTPMPNGEQNFRLNWASFG--AGEKRDDT------------------PDHTIFVGDLA 182
+P + F+LNWAS G+ R + +++IFVGDLA
Sbjct: 138 HRAQ-VPGSSRFFKLNWASGSNPGGDARSNAGPGNRLSNASGSRLSKPQQEYSIFVGDLA 196
Query: 183 ADVTDYMLQETFRARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+DV++ +L F YP K K++ D TG KG+GFVRF Q A+ + +
Sbjct: 197 SDVSESLLYTHFDKEYPGLVKQVKIMTDPHTGANKGFGFVRFVSPEAQQAALQDNKSIVI 256
Query: 242 STRPMRIGPA--------TNKKTVSGQQQYPKASYQNSQ--VAQSDDDPNNTTVFVGNLD 291
+ R +R+G A + K S +Q P S + Q DPNN+ + + +
Sbjct: 257 NQRKVRVGQANGGNQDASSALKKTSTEQPIPTTSNLSQQQPALSPSTDPNNSVICLHGIT 316
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
S +TD+ L F +G +++ ++ +++ RS ++ AL + G + G + L
Sbjct: 317 SSITDDDLLAHFLPFGHIIYCRLNHVSGTAHIKYLLRSASQRALVFMQGVSICGNRLTLQ 376
Query: 352 WGR 354
WGR
Sbjct: 377 WGR 379
>gi|126304035|ref|XP_001381740.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Monodelphis domestica]
Length = 409
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 144/287 (50%), Gaps = 28/287 (9%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G K+I + T + Y F+EF A L N
Sbjct: 24 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAMN 81
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYMLQET 193
G + E ++NWA+ + +K+D + DH +FVGDL+ ++T ++
Sbjct: 82 GRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIKAA 139
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT
Sbjct: 140 F-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 198
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYG 307
K PK++Y+++ S DD P+N TV+ G + S +T++ +R+ FS +G
Sbjct: 199 KPPA------PKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 252
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
Q++ +++ K FV+F A A+ +NGT + G ++ WG+
Sbjct: 253 QIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 299
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 27/174 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + + FA G + +V+++ TG+ +GYGF+ F ++ AE +Q
Sbjct: 122 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 181
Query: 144 NGTPMPNGEQNFRLNWA---------SFGAGEKR---DDTPDH------TIFVGDLAADV 185
G + G + R NWA ++ + K+ DD + T++ G + + +
Sbjct: 182 GGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGL 239
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
T+ ++++TF + + +V D KGY FVRF A+ +NG
Sbjct: 240 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 286
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 152/320 (47%), Gaps = 27/320 (8%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK---------------QTGQIEGYGFIE 129
++G+L + E + F+ G + K+I + Q + Y F+E
Sbjct: 48 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 107
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
F A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T
Sbjct: 108 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTED 165
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R
Sbjct: 166 IKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 224
Query: 250 PATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 307
AT K S Q+ K V QS P N TV+ G + S +TD+ +R+ FS +G
Sbjct: 225 WATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQTFSPFG 282
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPD 364
Q++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D
Sbjct: 283 QIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTAIEGHVVKCYWGKESPDMTKNFQQVD 342
Query: 365 PNQWN--AGYYGYAQGYENY 382
+QW + YG Q Y Y
Sbjct: 343 YSQWGQWSQVYGNPQQYGQY 362
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 137 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 196
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 197 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 254
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF S G +++ KGY FVRF
Sbjct: 255 PKNCTVYCGGIASGLTDQLMRQTF-----SPFGQ--IMEIRVFPEKGYSFVRFSTHESAA 307
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 308 HAIVSVNG 315
>gi|241998018|ref|XP_002433652.1| tRNA selenocysteine associated protein, putative [Ixodes
scapularis]
gi|215495411|gb|EEC05052.1| tRNA selenocysteine associated protein, putative [Ixodes
scapularis]
Length = 181
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 99/174 (56%), Gaps = 13/174 (7%)
Query: 89 LQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP 147
L+ MDE ++ F GE V VK+IRN+ TG GYGF++F A+R L NG P
Sbjct: 1 LEPTMDEYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQRALLRCNGRP 60
Query: 148 MPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVV 207
+PN Q + + ++FVGDL+++V D L F RYPS K AKVV
Sbjct: 61 IPNATQGVSPSLL----------PREFSMFVGDLSSEVDDVHLYHAFSQRYPSVKAAKVV 110
Query: 208 IDRLTGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTRPMRIGPATNKKTVSGQ 260
+D+ +G +KG+GFVRF DESE A+ +M + + ++P+R+G A ++ G+
Sbjct: 111 LDQ-SGLSKGFGFVRFSDESEYQEALVDMQHSLLVGSKPIRVGVANPRRVADGR 163
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 33/171 (19%)
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
+Y +Q+ F + K++ +R+TG +GYGF+ FGDE RA+ NG RP+
Sbjct: 7 EYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQRALLRCNG-----RPI 61
Query: 247 RIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 306
P A+ Q P ++FVG+L S V D HL FSQ
Sbjct: 62 -----------------PNAT----QGVSPSLLPREFSMFVGDLSSEVDDVHLYHAFSQR 100
Query: 307 ------GQLVHVKIPAGKRCGFVQFADRSCAEEAL-RMLNGTQLGGQNIRL 350
++V + K GFV+F+D S +EAL M + +G + IR+
Sbjct: 101 YPSVKAAKVVLDQSGLSKGFGFVRFSDESEYQEALVDMQHSLLVGSKPIRV 151
>gi|281346697|gb|EFB22281.1| hypothetical protein PANDA_002889 [Ailuropoda melanoleuca]
Length = 377
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 144/287 (50%), Gaps = 28/287 (9%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G K+I + T + Y F+EF A L N
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAMN 58
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYMLQET 193
G + E ++NWA+ + +K+D + DH +FVGDL+ ++T ++
Sbjct: 59 GRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 116
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT
Sbjct: 117 F-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 175
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYG 307
K PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS +G
Sbjct: 176 KPPA------PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 229
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
Q++ +++ K FV+F A A+ +NGT + G ++ WG+
Sbjct: 230 QIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 276
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 27/174 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + + FA G + +V+++ TG+ +GYGF+ F ++ AE +Q
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 144 NGTPMPNGEQNFRLNWA------------------SFGAGEKRDDTPDHTIFVGDLAADV 185
G + G + R NWA S+ + + T++ G + + +
Sbjct: 159 GGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 216
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
T+ ++++TF + + +V D KGY FVRF A+ +NG
Sbjct: 217 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 263
>gi|70995622|ref|XP_752566.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|66850201|gb|EAL90528.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|159131321|gb|EDP56434.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus A1163]
Length = 489
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 129/292 (44%), Gaps = 23/292 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V +VK+I +K + + G + +
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNDTITALLNLMTLVRLRG---LCK 147
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
+ R+NWA ++DT H IFVGDL+ +V D +L + F A + S
Sbjct: 148 PSTAVESISRYAEIRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSA-FGS 206
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F + ++ +A+ M+G + +R +R A K
Sbjct: 207 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPSIS 266
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P Q+ + TT +VGNL T L L
Sbjct: 267 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPL 326
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
F +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 327 FHNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 378
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 12/265 (4%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 56 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 113
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 114 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 172
Query: 245 PMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
+R AT K S Q+ K V QS P N TV+ G + S +TD+ +R+
Sbjct: 173 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQT 230
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA 361
FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 231 FSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKN 290
Query: 362 --QPDPNQWN--AGYYGYAQGYENY 382
Q D +QW + YG Q Y Y
Sbjct: 291 FQQVDYSQWGQWSQVYGNPQQYGQY 315
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 90 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 149
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 150 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 207
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF S G +++ KGY FVRF
Sbjct: 208 PKNCTVYCGGIASGLTDQLMRQTF-----SPFGQ--IMEIRVFPEKGYSFVRFSTHESAA 260
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 261 HAIVSVNG 268
>gi|402891170|ref|XP_003908827.1| PREDICTED: nucleolysin TIA-1 isoform p40, partial [Papio anubis]
Length = 377
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 158/320 (49%), Gaps = 39/320 (12%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G K+I + T + Y F+EF A L N
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAMN 58
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYMLQET 193
G + E ++NWA+ + +K+D + DH +FVGDL+ ++T ++
Sbjct: 59 GRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 116
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT
Sbjct: 117 F-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 175
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYG 307
K PK++Y+++ S D+ P+N TV+ G + S +T++ +R+ FS +G
Sbjct: 176 KPPA------PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 229
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQA 361
Q++ +++ K FV+F A A+ +NGT + G ++ WG+ +P +Q
Sbjct: 230 QIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQN 289
Query: 362 Q---PDP-NQWNAGYYGYAQ 377
Q P P QW +YG AQ
Sbjct: 290 QIGYPQPYGQWGQ-WYGNAQ 308
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 27/174 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + + FA G + +V+++ TG+ +GYGF+ F ++ AE +Q
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 144 NGTPMPNGEQNFRLNWA------------------SFGAGEKRDDTPDHTIFVGDLAADV 185
G + G + R NWA S+ + + T++ G + + +
Sbjct: 159 GGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 216
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
T+ ++++TF + + +V D KGY FVRF A+ +NG
Sbjct: 217 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 263
>gi|190345927|gb|EDK37898.2| hypothetical protein PGUG_01996 [Meyerozyma guilliermondii ATCC
6260]
Length = 397
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 141/309 (45%), Gaps = 44/309 (14%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++G++ ++E YL+ F T +VK++ +K Y F+EF +R AE VL
Sbjct: 79 VLYVGNIPKTVNEQYLHELFDKTK---SVKLLHDKNKPGFN-YAFVEFDTREDAESVLTA 134
Query: 143 FNGTPMPNGEQNFRLNWA---SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
FNG+ + G + ++NWA S + ++P +TIFVGDL+A+V D L + F ++P
Sbjct: 135 FNGSEV--GGSSIKINWAYQSSTISTSSSPESPLYTIFVGDLSAEVDDETLGKAFD-QFP 191
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S K A V+ D T R++GYGFV F D +E A+ M G F R +R A+++
Sbjct: 192 SRKQAHVMWDMQTSRSRGYGFVSFADPAEAENALVTMPGSFIGGRAIRCNWASHRHMYQK 251
Query: 260 QQQYPKASYQNSQVAQSDDDP----------NN------------------------TTV 285
+ P S A + P NN TTV
Sbjct: 252 KNTRPPPKRSASAGATTPPSPYTAQGYPIDTNNGGRNPQPQAPKSFEVVLRQAPNWQTTV 311
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
++GN+ L L +G +V K K C FV++ A A+ L G + G
Sbjct: 312 YLGNIAHFTHSSDLIPLLQNFGFIVDFKFHPSKGCAFVKYDSHERAALAIVQLAGYSVNG 371
Query: 346 QNIRLSWGR 354
+ ++ WGR
Sbjct: 372 RPLKCGWGR 380
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 281 NNTTVFVGNLDSIVTDEHLRELF--SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
+NT ++VGN+ V +++L ELF ++ +L+H K G FV+F R AE L
Sbjct: 76 SNTVLYVGNIPKTVNEQYLHELFDKTKSVKLLHDKNKPGFNYAFVEFDTREDAESVLTAF 135
Query: 339 NGTQLGGQNIRLSW 352
NG+++GG +I+++W
Sbjct: 136 NGSEVGGSSIKINW 149
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 26/189 (13%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
+ + ++VG++ V + L E F TK K++ D+ Y FV F +
Sbjct: 74 EISNTVLYVGNIPKTVNEQYLHELF----DKTKSVKLLHDK-NKPGFNYAFVEFDTREDA 128
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGN 289
+T NG ++I A T+S Y T+FVG+
Sbjct: 129 ESVLTAFNGSEVGGSSIKINWAYQSSTISTSSSPESPLY---------------TIFVGD 173
Query: 290 LDSIVTDEHLRELFSQY--GQLVHV----KIPAGKRCGFVQFADRSCAEEALRMLNGTQL 343
L + V DE L + F Q+ + HV + + GFV FAD + AE AL + G+ +
Sbjct: 174 LSAEVDDETLGKAFDQFPSRKQAHVMWDMQTSRSRGYGFVSFADPAEAENALVTMPGSFI 233
Query: 344 GGQNIRLSW 352
GG+ IR +W
Sbjct: 234 GGRAIRCNW 242
>gi|452819166|gb|EME26242.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
gi|452825749|gb|EME32744.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
Length = 309
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 135/291 (46%), Gaps = 22/291 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + L F G V KV+ ++ TG+ G+GF++F R A R ++
Sbjct: 14 SLYVGNLDPRVCTELLQEIFELIGPVKLAKVVGDRNTGRSLGFGFVDFYDRPTAIRAMEL 73
Query: 143 FNGTPMPNGEQNFRLNWASFGAG------EKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
+G + Q R++WA GAG + D HTIFVG+L DV + L + F +
Sbjct: 74 MHGRRVYG--QEIRIDWAHAGAGAAGRILQDEDLANMHTIFVGNLGPDVDEEKLMKAFSS 131
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+ S GAK+ D TG GYGFV F ++ + AM M G S R +RI A K
Sbjct: 132 -FSSVAGAKISKDVETGLPAGYGFVSFREKKDADLAMQTMTGYILSGRALRIDWARGKNA 190
Query: 257 VSGQQQYPKASYQ------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 310
G + S + Q DP N +V+V L S + +RE F +G +
Sbjct: 191 ARGVSTFGSFSSSTVTPKPDIQTIMKQTDPLNVSVYVRGLPSDIDVAAIRESFRGFGDIE 250
Query: 311 HVKIPAGKRC-------GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
VKIP R FV+F A A+ ++G ++ G ++ WGR
Sbjct: 251 DVKIPDAARMTAQDRIYAFVKFKSHEVAARAIHDMHGKEIAGCVVQCEWGR 301
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 28/183 (15%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ T+++G+L +DE L F+ V K+ ++ +TG GYGF+ F + A+ +
Sbjct: 108 MHTIFVGNLGPDVDEEKLMKAFSSFSSVAGAKISKDVETGLPAGYGFVSFREKKDADLAM 167
Query: 141 QTFNGTPMPNGEQNFRLNWA------------------------SFGAGEKRDDTPDHTI 176
QT G + + R++WA K+ D + ++
Sbjct: 168 QTMTGYILSG--RALRIDWARGKNAARGVSTFGSFSSSTVTPKPDIQTIMKQTDPLNVSV 225
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKV-VIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+V L +D+ ++E+FR + + K+ R+T + + Y FV+F RA+ +
Sbjct: 226 YVRGLPSDIDVAAIRESFRG-FGDIEDVKIPDAARMTAQDRIYAFVKFKSHEVAARAIHD 284
Query: 236 MNG 238
M+G
Sbjct: 285 MHG 287
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEE 333
P+ +++VGNLD V E L+E+F G + K+ + G FV F DR A
Sbjct: 10 PSGMSLYVGNLDPRVCTELLQEIFELIGPVKLAKVVGDRNTGRSLGFGFVDFYDRPTAIR 69
Query: 334 ALRMLNGTQLGGQNIRLSW 352
A+ +++G ++ GQ IR+ W
Sbjct: 70 AMELMHGRRVYGQEIRIDW 88
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 152/317 (47%), Gaps = 31/317 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIR--NKQTGQIEG--------------- 124
+TL++G+L + E + F+ G + K+I N + +E
Sbjct: 8 KTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDVNNRDRLLEWLQLNNFYVWLCCLQH 67
Query: 125 -----YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVG 179
Y F+EF+ A T N + E ++NWA+ + +K+D + +FVG
Sbjct: 68 TSSDPYCFVEFVDHKDAASARATMNKRKILGKE--VKVNWATSPSCQKKDTSNHFHVFVG 125
Query: 180 DLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
DL+ D+T ++ F A + A+V+ D TG++KGYGFV F ++ + A+++M G
Sbjct: 126 DLSPDITTEDIRAAF-APFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQ 184
Query: 240 FCSTRPMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 297
+ R +R AT K S Q K + V QS P+N TV+ G + S +T+
Sbjct: 185 WLQGRQIRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSS--PHNCTVYCGGIQSGLTEH 242
Query: 298 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
+++ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 243 LMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKCFWGKESP 302
Query: 358 NKQAQPDPNQWNAGYYG 374
+ Q ++N Y+G
Sbjct: 303 DMQKNSQQVEYN--YWG 317
>gi|344301504|gb|EGW31816.1| hypothetical protein SPAPADRAFT_56576 [Spathaspora passalidarum
NRRL Y-27907]
Length = 632
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 112/200 (56%), Gaps = 31/200 (15%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIR----------NKQTGQIEGYGFIEF 130
RTLW+GDL W+DE + + + + V VK+I+ N Q GY F+EF
Sbjct: 94 RTLWMGDLDPWLDEQGITDLWWNILHKRVVVKIIKPKSSISNLDPNYQGLTNSGYCFVEF 153
Query: 131 ISRAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKR--DDTPD 173
+ A++ L + NG +P N ++ FRLNWAS GA TP+
Sbjct: 154 ETFEDAQQAL-SLNGQLLPDIAMPSQQHFPNNPDNQKKYFRLNWAS-GATLTAPIIQTPE 211
Query: 174 HTIFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+++FVGDL+A T+ L F+ +P S K +V+ D ++G+++ +GFVRF DESE+ RA
Sbjct: 212 YSLFVGDLSASTTEAHLLAFFQKSFPNSIKTVRVMTDPISGKSRCFGFVRFTDESERQRA 271
Query: 233 MTEMNGVFCSTRPMRIGPAT 252
+ EMNGV+ + RP+R+ AT
Sbjct: 272 LVEMNGVWFAGRPLRVALAT 291
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 272 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 331
Q+AQ DP NTTVFVG L S V++ L LF +G + VKIP GK CGFV++ R A
Sbjct: 377 QLAQPYADPTNTTVFVGGLSSEVSEPTLFTLFKPFGIIQQVKIPPGKNCGFVKYTTREEA 436
Query: 332 EEALRMLNGTQLGGQNIRLSWGR-SPSNKQ 360
EEA+ + G +GG +RLSWGR SP+NK+
Sbjct: 437 EEAIAAMQGFIIGGNRVRLSWGRVSPTNKK 466
>gi|242010197|ref|XP_002425859.1| Nucleolysin TIAR, putative [Pediculus humanus corporis]
gi|212509811|gb|EEB13121.1| Nucleolysin TIAR, putative [Pediculus humanus corporis]
Length = 295
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 97/175 (55%), Gaps = 5/175 (2%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E++L F GE A+K++RN+ TG+ GY F+ F S A V+
Sbjct: 7 LWMGSLESYMTESFLMNAFVKMGESPTAIKIMRNRLTGEQAGYCFVHFTSDEIARTVMHK 66
Query: 143 FNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG +PN F+LN A +++++VGDL+ D+ DY L + F +RY S
Sbjct: 67 LNGKVIPNSSPPVRFKLNHAGPNNRPVVGQDKEYSLWVGDLSPDIDDYTLYKCFASRYQS 126
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNK 254
+ AKVV+D G +KGY F+RF E EQ +MNG +RP+++ A K
Sbjct: 127 IRTAKVVLDS-AGFSKGYAFIRFASEEEQKNCCIQMNGFKGLGSRPIKVSGAVPK 180
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Query: 48 PQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
P + PP + A P V GQ E +LW+GDL +D+ L CFA +
Sbjct: 73 PNSSPPVRFKLNHAGPNNRPVV------GQDKEY-SLWVGDLSPDIDDYTLYKCFASRYQ 125
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
+ + G +GY FI F S + NG
Sbjct: 126 SIRTAKVVLDSAGFSKGYAFIRFASEEEQKNCCIQMNG 163
>gi|213514260|ref|NP_001133879.1| Nucleolysin TIAR [Salmo salar]
gi|209155676|gb|ACI34070.1| Nucleolysin TIAR [Salmo salar]
Length = 408
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 140/298 (46%), Gaps = 19/298 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK---------------QTGQIEGYG 126
+TL++G+L + E + F G + K+I + Q + Y
Sbjct: 8 KTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQSSNDPYC 67
Query: 127 FIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVT 186
F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T
Sbjct: 68 FVEFFEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 125
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +
Sbjct: 126 TEDIKAAF-APFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 184
Query: 247 RIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 306
R AT K Q + + + P N TV+ G + S +++ +R+ FS +
Sbjct: 185 RTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLMRQTFSPF 244
Query: 307 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQAQP 363
GQ++ +++ K F++F+ A A+ +NGT + ++ WG+ SP ++ P
Sbjct: 245 GQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKCYWGKESPDIAKSVP 302
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 40/206 (19%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKG---------- 217
D++ T++VG+L+ DVT+ ++ + F P K K++ ++ R
Sbjct: 2 EDESHPKTLYVGNLSRDVTEILILQLFTQIGP-CKSCKMITEQPDSRRMNSSVGFSVLQQ 60
Query: 218 -----YGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQ 272
Y FV F + + A+ MNG + +++ AT +
Sbjct: 61 SSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSS---------------- 104
Query: 273 VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFA 326
Q D N+ VFVG+L +T E ++ F+ +G++ ++ K GFV F
Sbjct: 105 --QKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFY 162
Query: 327 DRSCAEEALRMLNGTQLGGQNIRLSW 352
++ AE A+ + G LGG+ IR +W
Sbjct: 163 NKLDAENAIVHMGGQWLGGRQIRTNW 188
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 100 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFV 159
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF-----------GAGEKR-DDTPDH-- 174
F ++ AE + G + G + R NWA+ G+ + R +D +
Sbjct: 160 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSS 217
Query: 175 ----TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
T++ G + + ++++++++TF S G + I KGY F+RF
Sbjct: 218 PQNCTVYCGGIQSGLSEHLMRQTF-----SPFGQIMEIRVFP--EKGYSFIRFSSHESAA 270
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 271 HAIVSVNGT 279
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 21/105 (20%)
Query: 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKRCG----------- 321
+D+ + T++VGNL VT+ + +LF+Q G K+ P +R
Sbjct: 2 EDESHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQS 61
Query: 322 ------FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
FV+F + A AL +NG ++ G+ ++++W +PS+++
Sbjct: 62 SNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQK 106
>gi|255732850|ref|XP_002551348.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131089|gb|EER30650.1| predicted protein [Candida tropicalis MYA-3404]
Length = 810
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 120/214 (56%), Gaps = 32/214 (14%)
Query: 73 QQQGQPGEI---RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIR--NKQTGQI---- 122
Q G GE+ RTLW+GDL W+DE + + ++ + V +K+I+ N +T
Sbjct: 97 QDPGSSGELDKPRTLWMGDLDPWLDENAIQDLWWSILQKKVTIKIIKPKNPKTDPTFHGL 156
Query: 123 --EGYGFIEFISRAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAG 165
GY F+EF S A++ L + NG +P N ++ FRLNWAS GA
Sbjct: 157 TNSGYCFVEFESFEDAQQAL-SLNGQLLPDIAMPSQQHFPNNPDNQKKYFRLNWAS-GAT 214
Query: 166 EKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVR 222
TP+ ++FVGDL+A T+ L F+ +P S K +V+ D ++G+++ +GFVR
Sbjct: 215 LSAPIVQTPEFSLFVGDLSASTTEAHLLAFFQKTFPNSIKTVRVMTDPISGKSRCFGFVR 274
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
F +ESE+ RA+ EMNGV+ + RP+R+ AT + T
Sbjct: 275 FTEESERQRALVEMNGVWFAGRPLRVALATPRIT 308
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 53/82 (64%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DPNNTTVFVG L S V + L LF +G + VKIP GK CGFV+++ R AEEA+ +
Sbjct: 445 DPNNTTVFVGGLSSEVNEPTLYTLFKPFGMIQQVKIPPGKNCGFVKYSTRDEAEEAIAAM 504
Query: 339 NGTQLGGQNIRLSWGRSPSNKQ 360
G +GG +RLSWGR N +
Sbjct: 505 QGFIIGGNRVRLSWGRVSMNNK 526
>gi|7493336|pir||T39935 RNA binding protein - fission yeast (Schizosaccharomyces pombe)
(fragment)
Length = 240
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 90/148 (60%), Gaps = 3/148 (2%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+ E ++ + G+ V VK+IRN+ TG GY F+EF S A + +
Sbjct: 94 TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-S 152
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N P+P F+LNWAS G ++ +++IFVGDL+ +V ++ + F +RY S
Sbjct: 153 MNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNS 212
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESE 228
K AK++ D T ++GYGFVRF DE++
Sbjct: 213 CKSAKIMTDPQTNVSRGYGFVRFTDEND 240
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 33/194 (17%)
Query: 148 MPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVV 207
M + E N +++G+ + T+++G+L VT+ +Q+ + + K K++
Sbjct: 67 MASNESGNSENTSNYGSSRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVK-VKLI 125
Query: 208 IDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM-----RIGPATNKKTVSGQQQ 262
+R TG GY FV F E AM+ N T + G +K++S +
Sbjct: 126 RNRYTGMNAGYCFVEFASPHEASSAMSMNNKPIPGTNHLFKLNWASGGGLREKSISKASE 185
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVKI------P 315
Y ++FVG+L V + + LF S+Y KI
Sbjct: 186 Y--------------------SIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTN 225
Query: 316 AGKRCGFVQFADRS 329
+ GFV+F D +
Sbjct: 226 VSRGYGFVRFTDEN 239
>gi|410929559|ref|XP_003978167.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 385
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 135/277 (48%), Gaps = 5/277 (1%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F G + K+I + T + Y F+EF A +
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ +K+D + +FVGDL+ ++T ++ F +
Sbjct: 65 AMNGRKILGKE--VKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAF-GPFGKI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K
Sbjct: 122 SDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTN 181
Query: 262 QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 321
+ + + P+N TV+ G + + +T++ +R+ FS +G ++ +++ K
Sbjct: 182 ETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPDKGYS 241
Query: 322 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
FV+F A A+ +NGT + G ++ WG+ ++
Sbjct: 242 FVRFNSHEAAAHAIVSVNGTTIEGYVVKCYWGKETTD 278
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 28/196 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
DD T++VG+L+ DVT+ ++ E F P K K+++D T Y FV F +
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPC-KSCKMIVD--TAGHDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
+ MNG + + G++ K ++ + +Q D ++ VFVG
Sbjct: 59 ATATIAAMNG----------------RKILGKE--VKVNWATTPTSQKKDTSSHFHVFVG 100
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L +T + ++ F +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 101 DLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 160
Query: 343 LGGQNIRLSWG-RSPS 357
LGG+ IR +W R P+
Sbjct: 161 LGGRQIRTNWATRKPA 176
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + F G++ +V+++ TG+ +GYGF+ F
Sbjct: 84 PTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSF 143
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDDTP 172
++ AE +Q G + G + R NWA SF +
Sbjct: 144 FNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPS 201
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G + +T+ ++++TF + + +V D KGY FVRF A
Sbjct: 202 NCTVYCGGVTTGLTEQIMRQTF-SPFGHIMEIRVFPD------KGYSFVRFNSHEAAAHA 254
Query: 233 MTEMNG 238
+ +NG
Sbjct: 255 IVSVNG 260
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
DD T++VGNL VT+ + ELF Q G K+ AG C FV+F + A
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYC-FVEFYEHRHAT 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
+ +NG ++ G+ ++++W +P++++
Sbjct: 61 ATIAAMNGRKILGKEVKVNWATTPTSQK 88
>gi|123374542|ref|XP_001297747.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121878039|gb|EAX84817.1| hypothetical protein TVAG_508040 [Trichomonas vaginalis G3]
Length = 364
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 24/281 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAH-TGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
LW+G+ W DE L + TG+ + ++K TG YGF+ F S+ A V++
Sbjct: 4 LWVGNTVIWKDEESLMSDVKQMTGKQPKSCWFAKDKSTGTHLNYGFLVFASKNNAAEVIR 63
Query: 142 TFNGTPMPNGEQN-FRLNWASFGAGEKRDDTPD---HTIFVGDLAADVTDYMLQETFRAR 197
NGT +PN N F+L W + D + +VG L + V + L E F+
Sbjct: 64 LLNGTEVPNSNGNKFKLGWGNTTFESDADTIAKAEGFSCYVGGLPSSVKESELLEFFKRY 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+P+ A+++ D G +KGYGF++F E + A+ +N V P+++ T +
Sbjct: 124 FPNAINARLIRDE-KGNSKGYGFIKFNKHQEVIDAIQTLNNVNFKGHPLKVKEGTQNRV- 181
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKI-P 315
++ +N+ + D NTT+F+ N+D +V +E L + F QYG ++ VKI P
Sbjct: 182 --------STNENNSL-----DVKNTTLFITNIDPDVVKEETLLQNFHQYGNVLSVKIDP 228
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQN-IRLSWGRS 355
+ V + AE A L+G+Q GG + WG++
Sbjct: 229 NNQSWATVVMETHTSAESAKNALSGSQFGGTTKAVIEWGKA 269
>gi|322693766|gb|EFY85615.1| TIA1 cytotoxic granule-associated RNA binding protein [Metarhizium
acridum CQMa 102]
Length = 444
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 129/304 (42%), Gaps = 56/304 (18%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L+ + E L F TG V VK+I +K
Sbjct: 84 RALYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPDKN----------------------- 120
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
R+NWA ++DT H IFVGDL+ +V D +L + F A + +
Sbjct: 121 ------------EIRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSA-FGT 167
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGRT+GYGFV F D S+ +A++ M+G + +R +R A K
Sbjct: 168 VSEARVMWDMKTGRTRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 227
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G Q+P + V + TT +VGNL T + L
Sbjct: 228 QQQAMQAMGLTPTTPFGHHQFPAHGVGSYDVVLNQTPNWQTTCYVGNLTPYTTPNDVVPL 287
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS-NKQA 361
F +G +V + A + F++ A A+ +NG + G+ ++ SWG+ + N Q
Sbjct: 288 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTPNAQG 347
Query: 362 QPDP 365
DP
Sbjct: 348 NFDP 351
>gi|393216132|gb|EJD01623.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 937
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 111/235 (47%), Gaps = 51/235 (21%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLN-TCFAHTGEVVAVKVIR---NKQTGQ---IE 123
PP Q TLW GDL+ WMDE Y C + V VK+ + TGQ
Sbjct: 206 PPHAHKQSVSHSTLWWGDLEPWMDEEYAKQVCDIMGWDQVTVKIPHAPSDSVTGQQPNNP 265
Query: 124 GYGFIEFISRAGAERVLQTFNGTP-------MPNGEQNFRLNWAS----------FGAGE 166
GY F+ F S A VL N +PN + F LNWAS F
Sbjct: 266 GYCFLTFPSPQHAATVLSQINNASSGGTQAILPNSTKPFALNWASSPSPSPVTQTFPINT 325
Query: 167 KRDDTP------------DHTIFVGDLAADVTDYMLQETFRA--------RYP------- 199
D P +++IFVGDLA + ++ L FR R P
Sbjct: 326 TVDRPPSTGTLNNQGQQKEYSIFVGDLAPETSNSDLVAVFRNPVLGLRNDRAPKFIRPFH 385
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
S K AK+++D +TG ++GYGFVRF +E++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 386 SCKSAKIMLDPVTGVSRGYGFVRFTEEADQQRALIEMHGLYCLSRPMRISPATAK 440
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DP NTTVFVG L +++++ LR F+ +G + +VK+PAGK CGFVQF ++ AE A+ +
Sbjct: 575 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPAGKHCGFVQFVRKADAERAIERM 634
Query: 339 NGTQLGGQNIRLSWGRS 355
G +GG IRLSWGRS
Sbjct: 635 QGFPIGGSRIRLSWGRS 651
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K G F++F+ +A AER ++
Sbjct: 580 TVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPAGKHCG------FVQFVRKADAERAIER 633
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 634 MQGFPI--GGSRIRLSW 648
>gi|295669832|ref|XP_002795464.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226285398|gb|EEH40964.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 501
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 125/292 (42%), Gaps = 55/292 (18%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V +VK+I +K
Sbjct: 100 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKN----------------------- 136
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 137 ------------EIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 183
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F + S+ +A++ M+G + +R +R A K
Sbjct: 184 VSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 243
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P Q+ + + TT +VGNL T L L
Sbjct: 244 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPL 303
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
F +G +V + A + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 304 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGK 355
>gi|189239005|ref|XP_974444.2| PREDICTED: similar to tRNA selenocysteine associated protein
(secp43) [Tribolium castaneum]
Length = 299
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M ET++ + F GE + VKV+RNK TG+ GY F+ F + A +
Sbjct: 14 LWMGSLEPYMTETFIISAFRKMGENPLNVKVMRNKFTGEAAGYCFVHFANDEEAIDAMHK 73
Query: 143 FNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG P+P FRLN AS G D + +++VGDL+ DV DY L F ++Y +
Sbjct: 74 LNGKPIPGTTPVVRFRLNNAS-NTGRTLLDR-EFSVWVGDLSPDVDDYNLYRVFSSKYNT 131
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPAT 252
K AKV++D +G +KGYGFVRFG E E ++T MNG + T+ ++I A
Sbjct: 132 IKTAKVILDS-SGFSKGYGFVRFGSEDEMRDSLTTMNGYIGLGTKALKICNAV 183
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 31/187 (16%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L +T+ + FR + KV+ ++ TG GY FV F ++ E + AM +
Sbjct: 14 LWMGSLEPYMTETFIISAFRKMGENPLNVKVMRNKFTGEAAGYCFVHFANDEEAIDAMHK 73
Query: 236 MNGV-FCSTRPM---RIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
+NG T P+ R+ A+N +++ +V+VG+L
Sbjct: 74 LNGKPIPGTTPVVRFRLNNASNTGRTLLDREF--------------------SVWVGDLS 113
Query: 292 SIVTDEHLRELF-SQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQLG 344
V D +L +F S+Y + K+ K GFV+F ++L +NG LG
Sbjct: 114 PDVDDYNLYRVFSSKYNTIKTAKVILDSSGFSKGYGFVRFGSEDEMRDSLTTMNGYIGLG 173
Query: 345 GQNIRLS 351
+ +++
Sbjct: 174 TKALKIC 180
>gi|302696241|ref|XP_003037799.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
gi|300111496|gb|EFJ02897.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
Length = 759
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 124/257 (48%), Gaps = 52/257 (20%)
Query: 46 PQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQP-----GEIRTLWIGDLQYWMDETYLN- 99
PQP+A P P +A P + GQP TL GDL+ WMDE Y
Sbjct: 131 PQPRASHPL-----PPNPFSAADTAPAFRPGQPQPNSAASKSTLIWGDLEPWMDEEYAKQ 185
Query: 100 TCFAHTGEVVAVKVIR---NKQTGQIE---GYGFIEFISRAGAERVLQTFN----GTP-- 147
C + V +KV + TGQ GY F+ F + A A VL N G P
Sbjct: 186 VCNLMGWDPVNIKVPHPQPDPATGQQANNPGYCFLTFPTPAHAASVLAQVNNNGTGGPVT 245
Query: 148 MPNGEQNFRLNWAS--------------FGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
MPN + F +NWA+ AG + +++IFVGDLA + ++ L
Sbjct: 246 MPNSSKAFVMNWAAGMPATSPVGNSFSAVNAGVQNQYPKEYSIFVGDLAPETSNSDLVAV 305
Query: 194 FRA--------RYP-------STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
FR R P S K AK+++D +TG ++GYGFVRF DE++Q RA+ EM+G
Sbjct: 306 FRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPVTGVSRGYGFVRFTDEADQQRALIEMHG 365
Query: 239 VFCSTRPMRIGPATNKK 255
++C +RPMRI PAT K
Sbjct: 366 LYCLSRPMRISPATAKN 382
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 55/80 (68%)
Query: 276 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEAL 335
+ DP NTTVFVG L +++++ LR F+ +G + +VK+P GK CGFVQF ++ AE A+
Sbjct: 539 TSTDPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAENAI 598
Query: 336 RMLNGTQLGGQNIRLSWGRS 355
+ G +GG IRLSWGRS
Sbjct: 599 EKMQGFPIGGSRIRLSWGRS 618
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K GF++F+ +A AE ++
Sbjct: 547 TVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHC------GFVQFVRKADAENAIEK 600
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 601 MQGFPI--GGSRIRLSW 615
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 134/296 (45%), Gaps = 29/296 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDGTVSEELLVALFGKMGPVKSCKIIREPGN---DPYAFIEYSNYQAASTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRVFLDKE--IKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 ----------KTVSGQQQYPKASYQNSQ-----VAQSDDDPNNTTVFVGNLD-SIVTDEH 298
G +N+Q S P NTTV+ G +++DE
Sbjct: 181 SSKSGGQGGGMGGMGGGGGAGNGIKNNQRHTFEEVYSQSSPTNTTVYCGGFQPHVISDEL 240
Query: 299 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ + F Q+G + V++ K F++F + A A+ + T++ G +++ WG+
Sbjct: 241 MHKHFMQFGPIQDVRVFKDKGFAFIKFVAKEAAARAIEHTHNTEVHGNHVKCFWGK 296
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 334
D+ T++VGNLD V++E L LF + G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDGTVSEELLVALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAASTA 61
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSN 358
L +N + I+++W SP N
Sbjct: 62 LTAMNKRVFLDKEIKVNWATSPGN 85
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 138/292 (47%), Gaps = 16/292 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F G V + K+IR + + Y FIE+ + A+ L
Sbjct: 8 KTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASS---DPYAFIEYANHQSAQTALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRLFLKKE--IKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-----K 255
++V D T +++GY FV F ++E A+ MNG + +R +R +T K +
Sbjct: 122 ISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRE 181
Query: 256 TVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNL-DSIVTDEHLRELFSQYGQLVHVKI 314
+ G + ++ ++ P NTTV+ G + + D + + F +GQ+ V++
Sbjct: 182 NIKGIKSGKTPGFEE---IYNNTGPTNTTVYCGGFPANAINDMLIHKHFGLFGQIQDVRV 238
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPN 366
K F++F ++ A A+ + +++ G ++ WG+ + A N
Sbjct: 239 FKDKGYAFIKFNNKESAARAIEGTHNSEIQGYAVKCYWGKENGGEMASNGIN 290
>gi|410083501|ref|XP_003959328.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
gi|372465919|emb|CCF60193.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
Length = 365
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 145/333 (43%), Gaps = 38/333 (11%)
Query: 58 TQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK 117
++ P + ++ G+ + L+IG+L ++E L F G++V VKV+ +K
Sbjct: 7 SETVVPVENVIPASAKEGGRETSDKVLYIGNLDKSINEDALKQYFQVAGQIVDVKVMVDK 66
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
+ + Y FIE+ + A LQT NG + N +N ++NWA F + +D +F
Sbjct: 67 KNNHV-NYAFIEYSTNHDANVALQTLNGIQIEN--KNIKINWA-FQSQTNLNDDTSFNLF 122
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
+GDL +V D L F++ P A V+ D T R++GYGFV F AM +M
Sbjct: 123 IGDLNVNVDDTTLANAFKS-CPGFLQAHVMWDMQTSRSRGYGFVSFDTHENAQAAMDQMQ 181
Query: 238 GVFCSTRPMRIGPAT-----------------------NKKTVSGQQQYPKASYQNSQVA 274
G + R +RI AT N+ + GQQ P +
Sbjct: 182 GHEINGRAIRINWATKRENMNNNSNNNTNNNNNNNQVRNRMMMEGQQNMPPPPPPMGSLP 241
Query: 275 ----QSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
Q+ +D P TT ++GN+ T+ L L +G ++ K C F++
Sbjct: 242 PVNPQAVEDMIRRAPPRVTTAYIGNIPHFATEPDLIPLLQNFGFILDFTHYPEKGCCFIK 301
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
+ A + L+ Q G+N+R WG+ S
Sbjct: 302 YDTHEQAAVCIVALSNFQFQGRNLRTGWGKERS 334
>gi|300175779|emb|CBK21322.2| unnamed protein product [Blastocystis hominis]
Length = 320
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 4/175 (2%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTLWIGD+Q E YL + + ++K++R++ T + G+GFI+F + A L
Sbjct: 3 RTLWIGDVQENWTEDYLCALMRNAKGLSSIKLMRDRTTNESLGFGFIDFATEEDAIHALN 62
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD-HTIFVGDLAADVTDYMLQETFRARYPS 200
+NG P+P FRLN FG + + D + +++GDL + VTD L FR +Y S
Sbjct: 63 GYNGRPIPGTGYTFRLN---FGGNSRNLNLGDNYCLYIGDLESSVTDTQLYTIFRDKYLS 119
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
GAK++ + T +KGYGF++F E A+ EMNG + RP+++ A ++
Sbjct: 120 FCGAKIMRETGTSVSKGYGFIQFRARDEAETALKEMNGYVINGRPIKLSYAAARR 174
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 28/188 (14%)
Query: 174 HTIFVGDLAADVT-DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
T+++GD+ + T DY+ A+ S+ K++ DR T + G+GF+ F E + + A
Sbjct: 3 RTLWIGDVQENWTEDYLCALMRNAKGLSS--IKLMRDRTTNESLGFGFIDFATEEDAIHA 60
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDS 292
+ NG RP+ T + G NS+ D N +++G+L+S
Sbjct: 61 LNGYNG-----RPIPGTGYTFRLNFGG----------NSRNLNLGD---NYCLYIGDLES 102
Query: 293 IVTDEHLRELF-SQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQLGG 345
VTD L +F +Y KI K GF+QF R AE AL+ +NG + G
Sbjct: 103 SVTDTQLYTIFRDKYLSFCGAKIMRETGTSVSKGYGFIQFRARDEAETALKEMNGYVING 162
Query: 346 QNIRLSWG 353
+ I+LS+
Sbjct: 163 RPIKLSYA 170
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
G+ L+IGDL+ + +T L T F K++R T +GYGFI+F +R AE
Sbjct: 90 GDNYCLYIGDLESSVTDTQLYTIFRDKYLSFCGAKIMRETGTSVSKGYGFIQFRARDEAE 149
Query: 138 RVLQTFNG 145
L+ NG
Sbjct: 150 TALKEMNG 157
>gi|308198150|ref|XP_001387102.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
gi|149389050|gb|EAZ63079.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
Length = 690
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 116/220 (52%), Gaps = 32/220 (14%)
Query: 64 QAAGVAVPPQQQG--QPGEI---RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIRNK 117
Q + VA Q G GE+ RTLW+GDL W+DE + + + + V VK+I+ K
Sbjct: 79 QQSSVAAEKDQTGSDNSGEVQSPRTLWMGDLDPWLDENGIADLWWKILQKRVTVKIIKPK 138
Query: 118 --------QTGQIEGYGFIEFISRAGAERVLQTFNGTPMP---------------NGEQN 154
Q GY F+EF S A+ L NG +P N ++
Sbjct: 139 TSKPDITYQGLSHSGYCFVEFESFEDAQLAL-GLNGQLLPDIAMPSQQHFPNNPDNQKKY 197
Query: 155 FRLNWASFGA-GEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLT 212
FRLNWAS +P++++FVGDL+A T+ L F+ +P S K +V+ D ++
Sbjct: 198 FRLNWASGATLSAPIIQSPEYSLFVGDLSASTTEAHLLAFFQKNFPASIKTVRVMTDPVS 257
Query: 213 GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
G+++ +GFVRF DESE+ RA+ EMNGV+ RP+R+ AT
Sbjct: 258 GKSRCFGFVRFTDESERQRALVEMNGVWFGGRPLRVALAT 297
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 54/82 (65%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DPNNTTVFVG L S VT+ L LF +G + VKIP GK CGF++++ R AEEA+ +
Sbjct: 398 DPNNTTVFVGGLSSEVTESTLFTLFKPFGIIQQVKIPPGKNCGFIKYSTREEAEEAIAAM 457
Query: 339 NGTQLGGQNIRLSWGRSPSNKQ 360
G +GG +RLSWGR N +
Sbjct: 458 QGFIIGGNRVRLSWGRVSMNNK 479
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 29/199 (14%)
Query: 175 TIFVGDL--------AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDE 226
T+++GDL AD+ +LQ+ + K +K I GY FV F +
Sbjct: 103 TLWMGDLDPWLDENGIADLWWKILQKRVTVKIIKPKTSKPDITYQGLSHSGYCFVEF-ES 161
Query: 227 SEQLRAMTEMNGVFC------STRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDP 280
E + +NG S + P KK + + + ++ + QS +
Sbjct: 162 FEDAQLALGLNGQLLPDIAMPSQQHFPNNPDNQKKYF--RLNWASGATLSAPIIQSPE-- 217
Query: 281 NNTTVFVGNLDSIVTDEHLRELFSQY--GQLVHVKI----PAGK-RC-GFVQFADRSCAE 332
++FVG+L + T+ HL F + + V++ +GK RC GFV+F D S +
Sbjct: 218 --YSLFVGDLSASTTEAHLLAFFQKNFPASIKTVRVMTDPVSGKSRCFGFVRFTDESERQ 275
Query: 333 EALRMLNGTQLGGQNIRLS 351
AL +NG GG+ +R++
Sbjct: 276 RALVEMNGVWFGGRPLRVA 294
>gi|270010282|gb|EFA06730.1| hypothetical protein TcasGA2_TC009661 [Tribolium castaneum]
Length = 294
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M ET++ + F GE + VKV+RNK TG+ GY F+ F + A +
Sbjct: 9 LWMGSLEPYMTETFIISAFRKMGENPLNVKVMRNKFTGEAAGYCFVHFANDEEAIDAMHK 68
Query: 143 FNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG P+P FRLN AS G D + +++VGDL+ DV DY L F ++Y +
Sbjct: 69 LNGKPIPGTTPVVRFRLNNAS-NTGRTLLDR-EFSVWVGDLSPDVDDYNLYRVFSSKYNT 126
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPAT 252
K AKV++D +G +KGYGFVRFG E E ++T MNG + T+ ++I A
Sbjct: 127 IKTAKVILDS-SGFSKGYGFVRFGSEDEMRDSLTTMNGYIGLGTKALKICNAV 178
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 31/187 (16%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L +T+ + FR + KV+ ++ TG GY FV F ++ E + AM +
Sbjct: 9 LWMGSLEPYMTETFIISAFRKMGENPLNVKVMRNKFTGEAAGYCFVHFANDEEAIDAMHK 68
Query: 236 MNGV-FCSTRPM---RIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
+NG T P+ R+ A+N +++ +V+VG+L
Sbjct: 69 LNGKPIPGTTPVVRFRLNNASNTGRTLLDREF--------------------SVWVGDLS 108
Query: 292 SIVTDEHLRELF-SQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQLG 344
V D +L +F S+Y + K+ K GFV+F ++L +NG LG
Sbjct: 109 PDVDDYNLYRVFSSKYNTIKTAKVILDSSGFSKGYGFVRFGSEDEMRDSLTTMNGYIGLG 168
Query: 345 GQNIRLS 351
+ +++
Sbjct: 169 TKALKIC 175
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 27/273 (9%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
QP +L++GDL+ + ++ L F+ G+VV+V+V R+ + + GY ++ F +
Sbjct: 31 AQPLPTTSLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMD 90
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFR 195
A R L+ N P+ N + R+ +++ +R + + IF+ +L + + L +TF
Sbjct: 91 AARALEMLNFVPLNN--KPIRVMYSNRDPSSRRSGSAN--IFIKNLDKTIDNKTLHDTFS 146
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
A + + KV D + G++KG+GFV++ E AM +NG+ + +P+ +GP K+
Sbjct: 147 A-FGAILSCKVATDDM-GQSKGFGFVQYEKEEFAQSAMKSLNGMLINDKPVYVGPFLRKQ 204
Query: 256 TVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 315
+ KA + N VFV NL T E L ++FS+YG + +
Sbjct: 205 --ERDNSFDKARFNN--------------VFVKNLSESTTKEDLVKIFSEYGNITSAVVM 248
Query: 316 AG----KRC-GFVQFADRSCAEEALRMLNGTQL 343
G RC GF+ F A A+ LNG ++
Sbjct: 249 VGTDGKSRCFGFINFESPDDAVRAVEELNGKKI 281
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 144/287 (50%), Gaps = 20/287 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ F+ G +++ KV + GQ +G+GF+++ A+ +++
Sbjct: 127 IFIKNLDKTIDNKTLHDTFSAFGAILSCKVATD-DMGQSKGFGFVQYEKEEFAQSAMKSL 185
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPD----HTIFVGDLAADVTDYMLQETFRARYP 199
NG + + + F ++RD++ D + +FV +L+ T L + F + Y
Sbjct: 186 NGMLINDKP----VYVGPFLRKQERDNSFDKARFNNVFVKNLSESTTKEDLVKIF-SEYG 240
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
+ A V++ G+++ +GF+ F + +RA+ E+NG + + G A K S
Sbjct: 241 NITSAVVMVGT-DGKSRCFGFINFESPDDAVRAVEELNGKKINDKEWYCGRAQKK---SE 296
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---- 315
++ K ++ S + + D +++ NLD ++D+ LRELFS +G++ K+
Sbjct: 297 REMDLKRRFEQS-MKDAADKYQGQNLYLKNLDDGISDDQLRELFSTFGKITSCKVMRDQN 355
Query: 316 -AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
K GFV F+ R A +A+ +NG L G+ + +++ + ++A
Sbjct: 356 GVSKGSGFVAFSTREEASQAITEMNGKMLSGKPLYVAFAQRKEERKA 402
>gi|344232977|gb|EGV64850.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 617
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 116/212 (54%), Gaps = 36/212 (16%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIR----------NKQTGQIE--GY 125
G RTLW+GDL W+DE + + + V++K+IR N +G + GY
Sbjct: 76 GTPRTLWMGDLDPWLDELGIEHLWWQILRKKVSIKLIRPKIPKQDMGYNMYSGGLSHSGY 135
Query: 126 GFIEFISRAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRD- 169
FIEF + A+ L + NG +P N ++ FRLNWAS GA
Sbjct: 136 CFIEFETFEDAKYAL-SLNGQLLPDVAIPSQTQFPNNPDNQKKYFRLNWAS-GATLSAPI 193
Query: 170 -DTPDHTIFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDES 227
+P++++FVGDL+A T+ L F+ +P S K +V+ D + G+++ +GFVRF DES
Sbjct: 194 VQSPEYSLFVGDLSASTTEAHLLAFFQKSFPRSVKTVRVMTDPVNGKSRCFGFVRFTDES 253
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPAT---NKKT 256
E+ RA+ EMNGV+ RP+R+ AT NKK+
Sbjct: 254 ERQRALHEMNGVWFGGRPLRVALATPRYNKKS 285
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 264 PKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFV 323
P+ N+Q Q +DP NTTVFVG L S V+++ L LF +G + +KIP GK CGFV
Sbjct: 375 PRTPILNNQHGQPYNDPTNTTVFVGGLSSEVSEQTLFALFQPFGVVQQIKIPPGKNCGFV 434
Query: 324 QFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQAQ 362
+++ R AE+A+ + G +GG +RLSWGR S +NK+ Q
Sbjct: 435 KYSTREEAEDAIASMQGYIIGGNRVRLSWGRVSVNNKKFQ 474
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQ-------YGQLVHVKIPAGKRC-GFVQFADRSCAEEAL 335
++FVG+L + T+ HL F + +++ + RC GFV+F D S + AL
Sbjct: 200 SLFVGDLSASTTEAHLLAFFQKSFPRSVKTVRVMTDPVNGKSRCFGFVRFTDESERQRAL 259
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQA 361
+NG GG+ +R++ NK++
Sbjct: 260 HEMNGVWFGGRPLRVALATPRYNKKS 285
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 135/299 (45%), Gaps = 38/299 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN---DPYAFIEYSNYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA S G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFL--EKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 ------------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIVT 295
V G Q++ N P NTTV+ G ++++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYN------QSSPTNTTVYCGGFPPNVIS 234
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
D+ + + F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 235 DDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 334
D+ T++VGNLDS V+++ L LFS G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNK 359
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 135/299 (45%), Gaps = 38/299 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPGN---DPYAFIEYSNYQAASTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA S G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFL--EKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 ------------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIVT 295
V G Q++ N P NTTV+ G ++++
Sbjct: 181 ASKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYN------QSSPTNTTVYCGGFPPNVIS 234
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
D+ + + F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 235 DDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 334
D+ T++VGNLD+ V+++ L LFS G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAASTA 61
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNK 359
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|367004118|ref|XP_003686792.1| hypothetical protein TPHA_0H01520 [Tetrapisispora phaffii CBS 4417]
gi|357525094|emb|CCE64358.1| hypothetical protein TPHA_0H01520 [Tetrapisispora phaffii CBS 4417]
Length = 494
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 154/340 (45%), Gaps = 61/340 (17%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQ-----TGQIEG-- 124
Q QG+ + L++G L Y +E + + GE V+++ N Q G EG
Sbjct: 36 QTQGKGNNV--LYMGGLDYSWNEAVIKDIWNKVGEPATNVRMMWNMQFQHNNAGPTEGKS 93
Query: 125 ---YGFIEFISRAGAERVLQTFNGTPMPNGE-QNFRLNWASFG-----AGEKRDDTP--- 172
Y F+EF + A + NGT +P + + F+LNW+S A + P
Sbjct: 94 NLGYCFVEFSTHETASNAIMK-NGTMIPGYKGRYFKLNWSSGSSLSSSATHTENQGPQSN 152
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
D+++FVGDL +VT+ L F++ Y ST +K++ D LT +KGYGF++F D+++ A
Sbjct: 153 DYSVFVGDLGQNVTESQLYNLFKSHYASTLSSKIIHDPLTYISKGYGFIKFHDQNDYNDA 212
Query: 233 MTEMNGVFCSTRPMRIG-------------------------PATNKKTVSG-------- 259
+++M + R +++ P T T++
Sbjct: 213 LSKMQNKILNGRGIKVRTVGNNDNNTTNKNVQFSNFRKDTFVPKTTSTTIASSATIVKPK 272
Query: 260 QQQYPKAS-----YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
Q+Q K S Q V +P+NTT+ V N ++ + F +G L+ +
Sbjct: 273 QKQDRKLSNLVITKQVLPVLNDSTNPDNTTLVVSNASKDISMNEFKSYFLPFGNLIEISK 332
Query: 315 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
FV + DR CAE ++R+L G + G I+++WGR
Sbjct: 333 DPNTNILFVTYVDRICAENSMRILQGKVIRGNKIQIAWGR 372
>gi|448520574|ref|XP_003868310.1| Ngr1 protein [Candida orthopsilosis Co 90-125]
gi|380352650|emb|CCG25406.1| Ngr1 protein [Candida orthopsilosis]
Length = 696
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 138/267 (51%), Gaps = 49/267 (18%)
Query: 17 AAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQG 76
A+HQ+Q +Q+ S Y + PP Q A+ A Q + + G++ P
Sbjct: 61 ASHQHQQEQELL---------SEYTVPNPPISTTQSNAVAAEQDSI--SGGISEQP---- 105
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE---------GYGF 127
RTLW+GDL W+DE + + + + V I +T +++ GY F
Sbjct: 106 -----RTLWMGDLDSWLDEKQITDLWWNLLKKKVVVKIIKPKTLKLDPQFQGLTNSGYCF 160
Query: 128 IEFISRAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRD--D 170
+EF + A++ L + NG +P N ++ FRLNWAS GA
Sbjct: 161 VEFETFEDAQQAL-SLNGQLLPDIAMPSQQVYPNNPDNQKKYFRLNWAS-GATLSAPIVQ 218
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
P++++FVGDL+A T+ L F+ ++P S K +V+ D ++G+++ +GFVRF +ESE+
Sbjct: 219 MPEYSLFVGDLSASTTEAHLLAFFQKKFPNSIKTVRVMTDPVSGKSRCFGFVRFTEESER 278
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKT 256
RA+ EMNGV+ + RP+R+ AT + T
Sbjct: 279 QRALNEMNGVWFAGRPLRVALATPRST 305
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DPNNTTVFVG L S VT+ L LF +G + +KIP GK CGFV+++ R AE + +
Sbjct: 422 DPNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFVKYSTREEAERTIGAM 481
Query: 339 NGTQLGGQNIRLSWGR-SPSNKQAQ 362
G +GG +RLSWGR S +NK+ Q
Sbjct: 482 QGFIIGGNRVRLSWGRVSMNNKKYQ 506
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 21/142 (14%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQY--GQLVHVKI----PAGK-RC-GFVQFADRSCAEEAL 335
++FVG+L + T+ HL F + + V++ +GK RC GFV+F + S + AL
Sbjct: 223 SLFVGDLSASTTEAHLLAFFQKKFPNSIKTVRVMTDPVSGKSRCFGFVRFTEESERQRAL 282
Query: 336 RMLNGTQLGGQNIRLSWG--RSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPS 393
+NG G+ +R++ RS + ++ N N + ++ GY + ++AP P
Sbjct: 283 NEMNGVWFAGRPLRVALATPRSTNYRKFGKSNNNNNVPFSSHS-GYYSPETTSSAPMPPE 341
Query: 394 MYY----------GGYPGYGNY 405
M + GG P +G +
Sbjct: 342 MMFIPPGAPQNQIGGSPLFGYF 363
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 135/299 (45%), Gaps = 38/299 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN---DPYAFIEYSNYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA S G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFL--EKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 ------------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIVT 295
V G Q++ N P NTTV+ G ++++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYN------QSSPTNTTVYCGGFPPNVIS 234
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
D+ + + F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 235 DDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 334
D+ T++VGNLDS V+++ L LFS G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNK 359
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 135/299 (45%), Gaps = 38/299 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN---DPYAFIEYSNYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA S G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFL--EKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 ------------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIVT 295
V G Q++ N P NTTV+ G ++++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYN------QSSPTNTTVYCGGFPPNVIS 234
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
D+ + + F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 235 DDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 334
D+ T++VGNLDS V+++ L LFS G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNK 359
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 146/301 (48%), Gaps = 32/301 (10%)
Query: 48 PQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
P P A+ A +P A GV + QP +L++GDL+ + ++ L F+ G+
Sbjct: 11 PNGSPGAVPAV--VSPGAVGVGL---GVAQPLPTTSLYVGDLEGSVSDSQLYELFSQAGQ 65
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK 167
VV+V+V R+ + + GY ++ F + A R L+ N P+ N + R+ +++ +
Sbjct: 66 VVSVRVCRDVTSRRSLGYAYVNFNNPLDAARALEVLNFAPLNN--KPIRVMYSNRDPSSR 123
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
R + + IF+ +L + + L ETF + + + KV +D G++KG+GFV++ E
Sbjct: 124 RSGSAN--IFIKNLDKMIDNKSLHETF-SSFGTILSCKVAMDE-GGQSKGFGFVQYEKEE 179
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
A+ +NG+ + +P+ +GP K+ + K + N VFV
Sbjct: 180 AAQNAIKSLNGMLINDKPVFVGPFLRKQ--ERDHSFDKTKFNN--------------VFV 223
Query: 288 GNLDSIVTDEHLRELFSQYGQL----VHVKIPAGKRC-GFVQFADRSCAEEALRMLNGTQ 342
NL T E L ++F +YG + V + + RC GF+ F + A A++ LNG +
Sbjct: 224 KNLSESTTKEDLLKIFGEYGNITSAVVMIGMDGKSRCFGFINFENPDAASRAVQELNGKK 283
Query: 343 L 343
+
Sbjct: 284 I 284
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 144/288 (50%), Gaps = 20/288 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + + GQ +G+GF+++ A+ +++
Sbjct: 129 NIFIKNLDKMIDNKSLHETFSSFGTILSCKVAMD-EGGQSKGFGFVQYEKEEAAQNAIKS 187
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARY 198
NG + N + F F ++RD + D T +FV +L+ T L + F Y
Sbjct: 188 LNGM-LINDKPVF---VGPFLRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKIF-GEY 242
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ A V+I + G+++ +GF+ F + RA+ E+NG + + +G A K S
Sbjct: 243 GNITSAVVMIG-MDGKSRCFGFINFENPDAASRAVQELNGKKINDKEWYVGRAQKK---S 298
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP--- 315
++ K ++ + + D +++ NLD + D+ LRELFS +G++ K+
Sbjct: 299 EREMELKRRFEQI-LKDAADKYQGLNLYLKNLDDSIGDDQLRELFSNFGKITSCKVMRDQ 357
Query: 316 --AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
K GFV F+ R A +AL +NG + G+ + +++ + +++A
Sbjct: 358 NGLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKA 405
>gi|353238970|emb|CCA70899.1| related to polyadenylate-binding protein [Piriformospora indica DSM
11827]
Length = 944
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 109/221 (49%), Gaps = 40/221 (18%)
Query: 82 RTLWIGDLQYWMDETY-LNTCFAHTGEVVAVKVIR------NKQTGQIEGYGFIEFISRA 134
+TLW+GDL+ WMD+ Y L C E A+ + R + GY + F +
Sbjct: 58 KTLWLGDLEPWMDDHYMLQVCSLFGWETSAIYMPRPPAAPNATRHPNNAGYCLLIFPTHE 117
Query: 135 GAERVLQTF------NGTP----MPNGEQNFRLNWASFGAGEKR--------DDTPDHTI 176
A V++ + N T +PN + +L+W S + D+ +++I
Sbjct: 118 KAATVVEQYGLDAMNNSTAQPILLPNSNRPIKLDWLSSTNAKVSIGKDPGPIDNAIEYSI 177
Query: 177 FVGDLAADVTDYMLQETFR---------------ARYPSTKGAKVVIDRLTGRTKGYGFV 221
FVGD+AADVT+ L FR A + S AKV++D +TG +KGYGFV
Sbjct: 178 FVGDIAADVTNADLMNVFRNPNLGLRGDFPPRLIAPFLSCCNAKVMVDSVTGISKGYGFV 237
Query: 222 RFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
RF E++Q RA+ EM G++C +RPMR+ AT K G +
Sbjct: 238 RFTSEADQKRALLEMQGLYCKSRPMRLSTATAKNKAGGADE 278
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRM 337
DP NTTVFVG L ++++E LR F+ +G + +VK+P GK CGFVQF +S AE A+
Sbjct: 397 SDPQNTTVFVGGLSPLISEETLRTFFAPFGAIHYVKVPPGKSCGFVQFVKKSDAERAIEA 456
Query: 338 LNGTQLGGQNIRLSWGRSP 356
L+G + G +RLSWGR P
Sbjct: 457 LSGFSIAGSKVRLSWGRIP 475
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G + VKV K G F++F+ ++ AER ++
Sbjct: 403 TVFVGGLSPLISEETLRTFFAPFGAIHYVKVPPGKSCG------FVQFVKKSDAERAIEA 456
Query: 143 FNGTPMPNGEQNFRLNW 159
+G + + RL+W
Sbjct: 457 LSGFSIAGSK--VRLSW 471
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 133/295 (45%), Gaps = 28/295 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGN---DPYAFIEYSNYQAASTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRVFLDKE--IKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 --------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHL 299
G K + + P NTTV+ G ++++DE +
Sbjct: 181 SSKSGGQGGGMGGMGGGGGAGNGIKNQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDELM 240
Query: 300 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ F Q+G + V++ K F++F + A A+ + +++ G +++ WG+
Sbjct: 241 HKHFMQFGPIQDVRVFKDKGFAFIKFVSKEAAARAIEHTHNSEVHGNHVKCFWGK 295
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 334
D+ T++VGNLD V+++ L LF + G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAASTA 61
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSN 358
L +N + I+++W SP N
Sbjct: 62 LTAMNKRVFLDKEIKVNWATSPGN 85
>gi|238881096|gb|EEQ44734.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 875
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 111/198 (56%), Gaps = 29/198 (14%)
Query: 82 RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIR--------NKQTGQIEGYGFIEFIS 132
RTLW+GDL W+DE + + ++ + V VK+I+ N Q GY F+EF S
Sbjct: 140 RTLWMGDLDPWLDENAIQDLWWSILQKKVVVKIIKPKNMKPDINFQGLTNSGYCFVEFES 199
Query: 133 RAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRD--DTPDHT 175
A+ L + NG +P N ++ FRLNWAS GA TP+++
Sbjct: 200 FEDAQHAL-SLNGQLLPDIAMPSQSNFPNNPDNQKKYFRLNWAS-GATLSAPIVQTPEYS 257
Query: 176 IFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+FVGDL+A T+ L F+ +P S K +V+ D ++G+++ +GFVRF +ESE+ RA+
Sbjct: 258 LFVGDLSASTTEAHLLAFFQKNFPNSIKTVRVMTDPISGKSRCFGFVRFTEESERQRALI 317
Query: 235 EMNGVFCSTRPMRIGPAT 252
EMNG + + RP+R+ AT
Sbjct: 318 EMNGAWFAGRPLRVALAT 335
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DPNNTTVFVG L S V++ L LF +G + VKIP GK CGFV++++R AEEA+ +
Sbjct: 509 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSNREEAEEAIAAM 568
Query: 339 NGTQLGGQNIRLSWGR-SPSNKQ 360
G +GG +RLSWGR S SNK+
Sbjct: 569 QGFVIGGNRVRLSWGRVSVSNKK 591
>gi|241953763|ref|XP_002419603.1| RNA-binding protein, putative; U1 snRNP protein, putative [Candida
dubliniensis CD36]
gi|223642943|emb|CAX43198.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 792
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 111/198 (56%), Gaps = 29/198 (14%)
Query: 82 RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIRNK--------QTGQIEGYGFIEFIS 132
RTLW+GDL W+DE + + ++ + V VK+I+ K Q GY F+EF S
Sbjct: 116 RTLWMGDLDPWLDENAIRDLWWSILQKKVVVKIIKPKNMKPDFSFQGLTNSGYCFVEFES 175
Query: 133 RAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRD--DTPDHT 175
A+ L + NG +P N ++ FRLNWAS GA TP+++
Sbjct: 176 FEDAQHAL-SLNGQLLPDIAMPSQSNFPNNPDNQKKYFRLNWAS-GATLSAPIVQTPEYS 233
Query: 176 IFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+FVGDL+A T+ L F+ +P S K +V+ D ++G+++ +GFVRF +ESE+ RA+
Sbjct: 234 LFVGDLSASTTEAHLLAFFQKNFPNSIKTVRVMTDPISGKSRCFGFVRFTEESERQRALI 293
Query: 235 EMNGVFCSTRPMRIGPAT 252
EMNG + + RP+R+ AT
Sbjct: 294 EMNGAWFAGRPLRVALAT 311
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DPNNTTVFVG L + V++ L LF +G + VKIP GK CGFV+++ R AEEA+ +
Sbjct: 461 DPNNTTVFVGGLSADVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSTREEAEEAIAAM 520
Query: 339 NGTQLGGQNIRLSWGR-SPSNKQ 360
G +GG +RLSWGR S SNK+
Sbjct: 521 QGFVIGGNRVRLSWGRVSISNKK 543
>gi|374671519|gb|AEZ56381.1| CBF-2 DNA-binding protein, partial [Dimocarpus longan]
Length = 84
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLA 182
GYGF+EF SRA AE+VLQ+++G+ MPN EQ FRLNWA+F AG++R + D +IFVGDLA
Sbjct: 1 GYGFVEFCSRAAAEKVLQSYSGSVMPNTEQPFRLNWATFSAGDRRTEAGSDLSIFVGDLA 60
Query: 183 ADVTDYMLQETFRARYPSTKGAKV 206
DVTD MLQ TF +++PS KGAKV
Sbjct: 61 PDVTDGMLQATFSSKFPSVKGAKV 84
>gi|68472181|ref|XP_719886.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
gi|68472416|ref|XP_719769.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441601|gb|EAL00897.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441727|gb|EAL01022.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
Length = 887
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 111/198 (56%), Gaps = 29/198 (14%)
Query: 82 RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIR--------NKQTGQIEGYGFIEFIS 132
RTLW+GDL W+DE + + ++ + V VK+I+ N Q GY F+EF S
Sbjct: 138 RTLWMGDLDPWLDENAIQDLWWSILQKKVVVKIIKPKNMKPDINFQGLTNSGYCFVEFES 197
Query: 133 RAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRD--DTPDHT 175
A+ L + NG +P N ++ FRLNWAS GA TP+++
Sbjct: 198 FEDAQHAL-SLNGQLLPDIAMPSQSNFPNNPDNQKKYFRLNWAS-GATLSAPIVQTPEYS 255
Query: 176 IFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+FVGDL+A T+ L F+ +P S K +V+ D ++G+++ +GFVRF +ESE+ RA+
Sbjct: 256 LFVGDLSASTTEAHLLAFFQKNFPNSIKTVRVMTDPISGKSRCFGFVRFTEESERQRALI 315
Query: 235 EMNGVFCSTRPMRIGPAT 252
EMNG + + RP+R+ AT
Sbjct: 316 EMNGAWFAGRPLRVALAT 333
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DPNNTTVFVG L S V++ L LF +G + VKIP GK CGFV++++R AEEA+ +
Sbjct: 517 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSNREEAEEAIAAM 576
Query: 339 NGTQLGGQNIRLSWGR-SPSNKQ 360
G +GG +RLSWGR S SNK+
Sbjct: 577 QGFVIGGNRVRLSWGRVSVSNKK 599
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 134/272 (49%), Gaps = 27/272 (9%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
QP +L++GDL+ + ++ L F+ G+VV+V+V R+ + + GY ++ + + A
Sbjct: 117 QPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDA 176
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
R ++ N P+ N + R+ +++ +R + + IF+ +L + + L +TF A
Sbjct: 177 ARAMEALNFAPLNN--KPIRVMYSNRDPSSRRSGSAN--IFIKNLDKTIDNKTLHDTFSA 232
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+ + KV +D + G++KG+GFV++ E AM +NG+ + +P+ +GP K+
Sbjct: 233 -FGAILSCKVAMDDI-GQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQ- 289
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL----VHV 312
+ S D VFV NL T E L ++FS+YG + V +
Sbjct: 290 ---------------ERDNSSDKAKFNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMI 334
Query: 313 KIPAGKRC-GFVQFADRSCAEEALRMLNGTQL 343
+ RC GFV F A A+ LNG ++
Sbjct: 335 GMDGKSRCFGFVNFESPDDAARAVEELNGKKI 366
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 145/288 (50%), Gaps = 20/288 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + GQ +G+GF+++ A+ +++
Sbjct: 211 NIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMD-DIGQSKGFGFVQYEKEESAQSAMKS 269
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPD----HTIFVGDLAADVTDYMLQETFRARY 198
NG + + + F ++RD++ D + +FV +L+ T L + F + Y
Sbjct: 270 LNGMLINDKP----VYVGPFLRKQERDNSSDKAKFNNVFVKNLSESTTKEDLIKVF-SEY 324
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ A V+I + G+++ +GFV F + RA+ E+NG + + +G A K S
Sbjct: 325 GTITSAVVMIG-MDGKSRCFGFVNFESPDDAARAVEELNGKKINDKEWYVGRAQKK---S 380
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP--- 315
++ K ++ S + + D +++ NLD +TD+ LRELFS +G++ KI
Sbjct: 381 EREMDLKRRFEQS-MKDAADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQ 439
Query: 316 --AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
K GFV F+ R A +AL +NG + G+ + +++ + ++A
Sbjct: 440 NGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEERKA 487
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 146/293 (49%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ L++ +L +D L+ F+ G +V+ KV + GQ GYGF++F + A+ +
Sbjct: 133 VGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATD-HMGQSRGYGFVQFDTEDSAKNAI 191
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH----TIFVGDLAADVTDYMLQETFRA 196
+ NG + N +Q F F E+R+ D ++V +L+ TD L+ TF
Sbjct: 192 EKLNGKVL-NDKQIF---VGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTF-G 246
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-- 254
+Y S A V+ D G+++ +GFV F + + RA+ +NG + +G A K
Sbjct: 247 QYGSISSAVVMRDG-DGKSRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKSE 305
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
+ + ++Y + S + + + ++V NLD VTDE LRELF+++G + K+
Sbjct: 306 RELELSRRYEQGS------SDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKV 359
Query: 315 ---PAG--KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
P+G K GFV F+ S A L +NG +GG+ + ++ + ++A+
Sbjct: 360 MRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAK 412
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 130/268 (48%), Gaps = 27/268 (10%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ +L++GDL + + ++ L F +VV+V+V R+ T GYG++ + + AE+ +
Sbjct: 45 LCSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAM 104
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
Q N + + NG+ R+ ++S + +R + +FV +L V + L E F +
Sbjct: 105 QKLNYSYL-NGKM-IRITYSSRDSSARRSGVGN--LFVKNLDKSVDNKTLHEAFSG-CGT 159
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
KV D + G+++GYGFV+F E A+ ++NG + + + +GP K+
Sbjct: 160 IVSCKVATDHM-GQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKE----- 213
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPAG 317
+ + D T V+V NL TD+ L+ F QYG + V ++ G
Sbjct: 214 -----------ERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDG 262
Query: 318 K-RC-GFVQFADRSCAEEALRMLNGTQL 343
K RC GFV F + A A+ LNG +
Sbjct: 263 KSRCFGFVNFENPEDAARAVEALNGKKF 290
>gi|328709618|ref|XP_003244016.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Acyrthosiphon pisum]
Length = 347
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 102/187 (54%), Gaps = 9/187 (4%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEF 130
PQ + ++W+G L+ +M E+++ F GE VK++RNK TG+ GY F++F
Sbjct: 60 PQASTAGQNVSSVWMGSLEPYMTESFITGAFQKMGEYPKNVKLMRNKNTGETAGYAFVDF 119
Query: 131 ISRAGAERVLQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDY 188
V+ NG +P N F+LN A G+ D ++++G+L++DV DY
Sbjct: 120 YDPVS---VMHKLNGKYIPGTNPPVRFKLNRAG-NPGKITTSNRDFSVWLGELSSDVDDY 175
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV-FCSTRPMR 247
L +TF RY S + AKVV+D G +KGYGF+RFG E EQ + MNG ++P++
Sbjct: 176 QLYKTFACRYQSIRTAKVVLDS-AGYSKGYGFIRFGSEEEQKHCLNNMNGFPGLGSKPIK 234
Query: 248 IGPATNK 254
+ K
Sbjct: 235 VSSVIPK 241
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 146/293 (49%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ L++ +L +D L+ F+ G +V+ KV + GQ GYGF++F + A+ +
Sbjct: 133 VGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATD-HMGQSRGYGFVQFDTEDSAKNAI 191
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH----TIFVGDLAADVTDYMLQETFRA 196
+ NG + N +Q F F E+R+ D ++V +L+ TD L+ TF
Sbjct: 192 EKLNGKVL-NDKQIF---VGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTF-G 246
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-- 254
+Y S A V+ D G+++ +GFV F + + RA+ +NG + +G A K
Sbjct: 247 QYGSISSAVVMRDG-DGKSRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKSE 305
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
+ + ++Y + S + + + ++V NLD VTDE LRELF+++G + K+
Sbjct: 306 RELELSRRYEQGS------SDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKV 359
Query: 315 ---PAG--KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
P+G K GFV F+ S A L +NG +GG+ + ++ + ++A+
Sbjct: 360 MRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAK 412
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 130/268 (48%), Gaps = 27/268 (10%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ +L++GDL + + ++ L F +VV+V+V R+ T GYG++ + + AE+ +
Sbjct: 45 LCSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAM 104
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
Q N + + NG+ R+ ++S + +R + +FV +L V + L E F +
Sbjct: 105 QKLNYSYL-NGKM-IRITYSSRDSSARRSGVGN--LFVKNLDKSVDNKTLHEAFSG-CGT 159
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
KV D + G+++GYGFV+F E A+ ++NG + + + +GP K+
Sbjct: 160 IVSCKVATDHM-GQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKE----- 213
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPAG 317
+ + D T V+V NL TD+ L+ F QYG + V ++ G
Sbjct: 214 -----------ERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDG 262
Query: 318 K-RC-GFVQFADRSCAEEALRMLNGTQL 343
K RC GFV F + A A+ LNG +
Sbjct: 263 KSRCFGFVNFENPEDAARAVEALNGKKF 290
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 136/296 (45%), Gaps = 29/296 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGKMGPVKSCKIIREPGN---DPYAFIEYSNYQAASTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRVFLDKE--IKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQSMNGQWIGSRNIRTNWSTRKLPPPRE 180
Query: 255 ----------KTVSGQQQYPKASYQNSQVAQSDD-----DPNNTTVFVGNLD-SIVTDEH 298
G +N+Q ++ P NTTV+ G ++++DE
Sbjct: 181 SSKSGGQGGGMGGMGGGGGAGNGIKNNQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDEL 240
Query: 299 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ + F Q+G + V++ K F++F + A A+ + +++ G +++ WG+
Sbjct: 241 MHKHFMQFGPIQDVRVFKDKGFAFIKFVTKEAAARAIEHTHNSEVHGNHVKCFWGK 296
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 108/252 (42%), Gaps = 41/252 (16%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D++ T++VG+L + V++ +L F P K K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGKMGP-VKSCKII--REPGNDP-YAFIEYSNYQA 57
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+T MN + +++ AT+ PK D ++ +FVG
Sbjct: 58 ASTALTAMNKRVFLDKEIKVNWATSPGNT------PKT-----------DISSHHHIFVG 100
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L + E LRE F+ +G++ + +I K FV F ++ AE A++ +NG
Sbjct: 101 DLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQSMNGQW 160
Query: 343 LGGQNIRLSWG-------RSPSNKQAQPDPNQWNAGYYGYAQGYENY-------GYAAAA 388
+G +NIR +W R S Q G G G +N Y ++
Sbjct: 161 IGSRNIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGGGGAGNGIKNNQRHTFEEVYNQSS 220
Query: 389 PQDPSMYYGGYP 400
P + ++Y GG+P
Sbjct: 221 PTNTTVYCGGFP 232
>gi|417399827|gb|JAA46899.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 370
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 156/338 (46%), Gaps = 28/338 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F G V+++++ R+ T + GY ++ F++ A A++VL T
Sbjct: 11 SLYVGDLPADVTEDMLFRKFNPVGPVLSIRICRDLVTRRSLGYAYVNFLNLADAQKVLDT 70
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N M G ++ RL W+ A ++ + +F+ +L + + ML E F A +
Sbjct: 71 MN-FDMIQG-KSIRLMWSQRDAYLRKSGIGN--VFIKNLDRSIDNKMLYEHFSA-FGKIL 125
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
+KV+ D R GY FV F +S RA+ EMNG + +GP N+K + Q
Sbjct: 126 SSKVMSDDKGSR--GYAFVHFQSQSAADRAIEEMNGALLKNCRLFVGPFKNRKEREAELQ 183
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N + DE L+E+FSQYG++V VK+ +GK
Sbjct: 184 NKANEF--------------TNVYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTDSSGKS 229
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP--NQWNAGYYGY 375
GFV F A+ A+ +NG + GQ + + + + +QA+ Q +G
Sbjct: 230 KGFGFVSFDTHEAAQRAVEYMNGKDICGQMVFVGRAQKKAERQAELKQMFEQLKRERFGR 289
Query: 376 AQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQPQQ 413
+G + Y D + +G+ + + ++
Sbjct: 290 CRGVKLYIKNLDETIDEEQLRRAFSSFGSMSRVKVMEE 327
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 144/315 (45%), Gaps = 41/315 (13%)
Query: 55 MWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI 114
MW+ + A + +G+ ++I +L +D L F+ G++++ KV+
Sbjct: 84 MWSQRDAYLRKSGIG-------------NVFIKNLDRSIDNKMLYEHFSAFGKILSSKVM 130
Query: 115 RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH 174
+ + + GY F+ F S++ A+R ++ NG + +N RL F ++R+ +
Sbjct: 131 SDDKGSR--GYAFVHFQSQSAADRAIEEMNGALL----KNCRLFVGPFKNRKEREAELQN 184
Query: 175 ------TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+++ + D+ D L+E F ++Y KV+ D +G++KG+GFV F
Sbjct: 185 KANEFTNVYIKNFGDDMDDERLKEVF-SQYGKIVSVKVMTDS-SGKSKGFGFVSFDTHEA 242
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
RA+ MNG + + +G A K + + + + + +++
Sbjct: 243 AQRAVEYMNGKDICGQMVFVGRAQKKAERQAELKQMFEQLKRERFGRC----RGVKLYIK 298
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKI--PAGKRCGF--VQFADRSCAEEALRM---LNGT 341
NLD + +E LR FS +G + VK+ G+ GF + F SC EEA + +NG
Sbjct: 299 NLDETIDEEQLRRAFSSFGSMSRVKVMEEEGRSKGFGLICF---SCPEEATKAMAEMNGQ 355
Query: 342 QLGGQNIRLSWGRSP 356
LG + I ++ + P
Sbjct: 356 VLGSKAINIALAQRP 370
>gi|336386826|gb|EGO27972.1| hypothetical protein SERLADRAFT_414166 [Serpula lacrymans var.
lacrymans S7.9]
Length = 933
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 114/234 (48%), Gaps = 44/234 (18%)
Query: 65 AAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLN-TCFAHTGEVVAVKVIR------NK 117
A+ PP TLW GDL+ WMDE Y C + V +KV +
Sbjct: 158 ASTAHTPPVNTNSNALRSTLWWGDLEPWMDEEYAKQVCGLMGWDPVNIKVPSPGPDPASG 217
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTF--NGT----PMPNGEQNFRLNWAS---------- 161
Q GY F+ F S + A+ VL NG+ MPN + F LNWAS
Sbjct: 218 QQANNPGYCFLTFPSPSLAQSVLAQVANNGSGQPVTMPNSSKPFVLNWASSVPNTPMSSS 277
Query: 162 FGAGEKRDDTP------DHTIFVGDLAADVTDYMLQETFRA--------RYP-------S 200
F A + +++IFVGDLA + ++ L FR R P S
Sbjct: 278 FPAANVVMSSAQQQYPREYSIFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLS 337
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
K AK+++D +TG ++GYGFVRF +E++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 338 CKSAKIMLDPVTGVSRGYGFVRFTEEADQQRALIEMHGLYCLSRPMRISPATAK 391
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 54/77 (70%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DP NTTVFVG L ++++E LR F+ +G + +VK+P GK CGFVQF ++ AE A+ +
Sbjct: 577 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKM 636
Query: 339 NGTQLGGQNIRLSWGRS 355
G +GG IRLSWGRS
Sbjct: 637 QGFPIGGSRIRLSWGRS 653
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K G F++F+ +A AER ++
Sbjct: 582 TVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCG------FVQFVRKADAERAIEK 635
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 636 MQGFPI--GGSRIRLSW 650
>gi|302767104|ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
gi|300164963|gb|EFJ31571.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
Length = 654
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 134/283 (47%), Gaps = 28/283 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + ET L T F+ G V +V+V R+ T + GYG++ + S A A R ++
Sbjct: 39 SLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEA 98
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG + R+ W+ ++ + IF+ +L + + L +TF A P
Sbjct: 99 LNYTPI-NG-KTIRIMWSHRDPSTRKSGVGN--IFIKNLDESIDNKALHDTFIAFGPILS 154
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
I GR+KGYGFV F + A+ ++NG+ + G++
Sbjct: 155 CK---IAHQDGRSKGYGFVHFETDEAANLAIEKVNGM----------------QLVGKKV 195
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-----PAG 317
+ + S + + T VFV NLD + +E ++E FS +G + +V I
Sbjct: 196 FVAKFVKRSDRLAATGETKFTNVFVKNLDPEMAEEEIKEHFSTFGVITNVVIMKDENDKS 255
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
K GFV F D A A+ +N +QLG + I + + + ++
Sbjct: 256 KGFGFVNFDDPEAARAAVETMNNSQLGSRTIYVGRAQKKAERE 298
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 19/281 (6%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L+ F G +++ K+ Q G+ +GYGF+ F + A +
Sbjct: 125 VGNIFIKNLDESIDNKALHDTFIAFGPILSCKIAH--QDGRSKGYGFVHFETDEAANLAI 182
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + G++ F A F R T F ++ M +E + + S
Sbjct: 183 EKVNGMQLV-GKKVF---VAKFVKRSDRLAATGETKFTNVFVKNLDPEMAEEEIKEHF-S 237
Query: 201 TKGA---KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
T G V++ ++KG+GFV F D A+ MN +R + +G A K
Sbjct: 238 TFGVITNVVIMKDENDKSKGFGFVNFDDPEAARAAVETMNNSQLGSRTIYVGRAQKK--- 294
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-- 315
+ ++Q + ++ ++ Q ++V NLD + DE L++ FS+YG + K+
Sbjct: 295 AEREQILRRQFEEKRMEQFQKY-QGANLYVKNLDDSIDDETLKQEFSRYGNITSAKVMRD 353
Query: 316 ---AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353
K GFV F A A NG + G+ I ++
Sbjct: 354 EKGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVAMA 394
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++ +L M E + F+ G + V VI + + +G+GF+ F A ++T
Sbjct: 218 VFVKNLDPEMAEEEIKEHFSTFGVITNV-VIMKDENDKSKGFGFVNFDDPEAARAAVETM 276
Query: 144 NGTPMPNGEQNFRLNWASFGAG----------EKRDDTPDH----TIFVGDLAADVTDYM 189
N + + G + + A A EKR + ++V +L + D
Sbjct: 277 NNSQL--GSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSIDDET 334
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L++ F +RY + AKV+ D G +KG+GFV F E RA TE NG+ + +P+ +
Sbjct: 335 LKQEF-SRYGNITSAKVMRDE-KGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVA 392
Query: 250 PATNKKT 256
A K+
Sbjct: 393 MAQRKEI 399
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGN---DPYAFIEYSNYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA S G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFLDKE--IKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 ------------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIVT 295
V G Q++ N P NTTV+ G ++++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYN------QSSPTNTTVYCGGFPPNVIS 234
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
D+ + + F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 235 DDLMHKHFVQFGPIHDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 334
D+ T++VGNLDS V+++ L LF G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNK 359
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLDKEIKVNWATSPGNQ 86
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGN---DPYAFIEYSNYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA S G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFLDKE--IKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 ------------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIVT 295
V G Q++ N P NTTV+ G ++++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYN------QSSPTNTTVYCGGFPPNVIS 234
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
D+ + + F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 235 DDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D++ T++VG+L + V++ +L F P K K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGTMGP-VKSCKII--REPGNDP-YAFIEYSNYQA 57
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+T MN + +++ N T G Q PK D ++ +FVG
Sbjct: 58 ATTALTAMNKRLFLDKEIKV----NWATSPGNQ--PKT-----------DISSHHHIFVG 100
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L + E LRE F+ +G++ + +I K FV F ++ AE A++ +NG
Sbjct: 101 DLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQW 160
Query: 343 LGGQNIRLSWG-------RSPSNKQAQPDPNQWNAGYYGYAQGYENYG----YAAAAPQD 391
+G ++IR +W R PS Q G +G + + Y ++P +
Sbjct: 161 IGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTN 220
Query: 392 PSMYYGGYP 400
++Y GG+P
Sbjct: 221 TTVYCGGFP 229
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 147/293 (50%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ L++ +L +D L+ F+ G +V+ KV + GQ GYGF++F + A+ +
Sbjct: 128 VGNLFVKNLDKSVDNKTLHETFSGCGTIVSCKVAAD-HMGQSRGYGFVQFDTEDSAKNAI 186
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH----TIFVGDLAADVTDYMLQETFRA 196
+ NG + N +Q F F E+R+ D ++V +L+ TD L+ TF
Sbjct: 187 EKLNGKVL-NDKQIF---VGPFLRKEERESAADKMKFTNVYVKNLSEVTTDDELKTTF-G 241
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-- 254
+Y S A V+ D G+++ +GFV F + + RA+ +NG + +G A K
Sbjct: 242 QYGSISSAVVMRDG-DGKSRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKSE 300
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
+ + ++Y + S + + + + ++V NLD VTDE LRELF+++G + K+
Sbjct: 301 RELELSRRYEQGS------SDAGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKV 354
Query: 315 ---PAG--KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
P+G K GFV F+ S A L +NG +GG+ + ++ + ++A+
Sbjct: 355 MRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAK 407
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 133/270 (49%), Gaps = 27/270 (10%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAER 138
G + +L++GDL + + ++ L F +VV+V+V R+ T GYG++ + + AE+
Sbjct: 38 GALCSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTEDAEK 97
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARY 198
+Q N + + NG+ R+ ++S + +R + +FV +L V + L ETF
Sbjct: 98 AMQKLNYSTL-NGKM-IRITYSSRDSSARRSGVGN--LFVKNLDKSVDNKTLHETFSG-C 152
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ KV D + G+++GYGFV+F E A+ ++NG + + + +GP K+
Sbjct: 153 GTIVSCKVAADHM-GQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKE--- 208
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIP 315
+ + D T V+V NL + TD+ L+ F QYG + V ++
Sbjct: 209 -------------ERESAADKMKFTNVYVKNLSEVTTDDELKTTFGQYGSISSAVVMRDG 255
Query: 316 AGK-RC-GFVQFADRSCAEEALRMLNGTQL 343
GK RC GFV F + A A+ LNG +
Sbjct: 256 DGKSRCFGFVNFENPEDAARAVEALNGKKF 285
>gi|297301957|ref|XP_001098541.2| PREDICTED: nucleolysin TIAR isoform 5 [Macaca mulatta]
Length = 506
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 120/236 (50%), Gaps = 6/236 (2%)
Query: 152 EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
+ ++NWA+ + +K+D + +FVGDL+ ++T ++ F A + A+VV D
Sbjct: 206 DSEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISDARVVKDMA 264
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNS 271
TG++KGYGFV F ++ + A+ M G + R +R AT K Q
Sbjct: 265 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRF 324
Query: 272 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 331
+ + P N TV+ G + S +TD+ +R+ FS +GQ++ +++ K FV+F+ A
Sbjct: 325 EDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESA 384
Query: 332 EEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWN--AGYYGYAQGYENY 382
A+ +NGT + G ++ WG+ SP + Q D +QW + YG Q Y Y
Sbjct: 385 AHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQY 440
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 38/210 (18%)
Query: 48 PQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
P ++ WAT P Q+ +++GDL + + + FA G+
Sbjct: 205 PDSEVKVNWAT-----------TPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGK 253
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------ 161
+ +V+++ TG+ +GYGF+ F ++ AE + G + G + R NWA+
Sbjct: 254 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAP 311
Query: 162 ------------FGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVID 209
F + + T++ G +A+ +TD ++++TF S G + I
Sbjct: 312 KSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF-----SPFGQIMEIR 366
Query: 210 RLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
KGY FVRF A+ +NG
Sbjct: 367 VFP--EKGYSFVRFSTHESAAHAIVSVNGT 394
>gi|367030019|ref|XP_003664293.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
gi|347011563|gb|AEO59048.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
Length = 787
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 139/300 (46%), Gaps = 26/300 (8%)
Query: 54 AMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKV 113
A +Q A P AG P P +L++G+L + E L F+ G V +++V
Sbjct: 37 ASGESQTAEPDTAG-PTPSSSAPHPQSSASLYVGELDPSVTEAMLFELFSQIGSVASIRV 95
Query: 114 IRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD 173
R+ T + GY ++ + S A E+ L+ N T + + R+ W+ ++ T
Sbjct: 96 CRDAVTRRSLGYAYVNYNSTADGEKALEELNYTLIKG--RPCRIMWSQRDPALRK--TGQ 151
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
+F+ +L + + L +TF A + + KV D G +KGYGFV + + +A+
Sbjct: 152 GNVFIKNLDTAIDNKALHDTF-AAFGNILSCKVAQDE-NGNSKGYGFVHYETDEAAAQAI 209
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSI 293
+NG+ + + + +G KK + + KA+Y T V+V N++
Sbjct: 210 KHVNGMLLNEKKVYVGYHIPKKDRQSKFEEMKANY--------------TNVYVKNINLE 255
Query: 294 VTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
VT+E RELFS+YG++ + + GFV F+ A +A+ LNG + GQ +
Sbjct: 256 VTEEEFRELFSKYGEVTSSTLARDQEGKSRGFGFVNFSTHDSAAKAVEELNGKEFRGQEL 315
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 116/234 (49%), Gaps = 9/234 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A + ++
Sbjct: 153 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAAAQAIKH 211
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPS 200
NG + + + K ++ + ++V ++ +VT+ +E F ++Y
Sbjct: 212 VNGMLLNEKKVYVGYHIPKKDRQSKFEEMKANYTNVYVKNINLEVTEEEFRELF-SKYGE 270
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
+ + D+ G+++G+GFV F +A+ E+NG + + +G A K +
Sbjct: 271 VTSSTLARDQ-EGKSRGFGFVNFSTHDSAAKAVEELNGKEFRGQELYVGRAQKKHE---R 326
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
++ + SY+ ++ A+ + +++ NL + D+ LR++FS++G + K+
Sbjct: 327 EEELRKSYEAAR-AEKANKYQGVNLYIKNLADDIDDDKLRQMFSEFGPITSAKV 379
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 36/198 (18%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VG+L VT+ ML E F ++ S +V D +T R+ GY +V + ++ +A+
Sbjct: 65 SLYVGELDPSVTEAMLFELF-SQIGSVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALE 123
Query: 235 EMNGVFCSTRPMRI-----GPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGN 289
E+N RP RI PA K +GQ VF+ N
Sbjct: 124 ELNYTLIKGRPCRIMWSQRDPALRK---TGQ----------------------GNVFIKN 158
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLG 344
LD+ + ++ L + F+ +G ++ K+ K GFV + A +A++ +NG L
Sbjct: 159 LDTAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLN 218
Query: 345 GQNIRLSWGRSPSNKQAQ 362
+ + + + ++Q++
Sbjct: 219 EKKVYVGYHIPKKDRQSK 236
>gi|260940363|ref|XP_002614481.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
gi|238851667|gb|EEQ41131.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
Length = 651
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 135/268 (50%), Gaps = 47/268 (17%)
Query: 17 AAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQG 76
A+HQ+Q +Q+ +P P + + AT+ A ++ G
Sbjct: 26 ASHQHQQEQELLSS-----------FTVPEPPISTKESSSATETAEHESQGTP------- 67
Query: 77 QPGEIRTLWIGDLQYWMDET-YLNTCFAHTGEVVAVKVIRNK----QTG----QIEGYGF 127
P + RTLW+GDL W+DE+ ++ + V+VK+I+ K ++G GY F
Sbjct: 68 HPEKPRTLWMGDLDPWLDESAIVDLWWQILRSKVSVKLIKPKFIKPESGFTGLSHSGYCF 127
Query: 128 IEFISRAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRD--D 170
+EF S A+ L NG +P N ++ FRLNWAS GA
Sbjct: 128 VEFQSYEEAQSAL-ALNGQLLPDIAMPSQKHFPNNPDNQKKYFRLNWAS-GATLTAPLIH 185
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
TP++++FVGDL A T+ L F+ +P S + +V+ D ++G+++ +GFVRF +ESE+
Sbjct: 186 TPEYSLFVGDLTASTTEAHLLSFFQKSFPNSIRTVRVMTDPVSGKSRCFGFVRFTEESER 245
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTV 257
RA+ EMNG + RP+R+ AT + T
Sbjct: 246 QRALREMNGAWFGGRPLRVALATPRNTA 273
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 56/82 (68%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DP+NTTVFVG L S V+++ L LF +G + +KIP GK CGF++++ R AEEA++ +
Sbjct: 347 DPSNTTVFVGGLRSEVSEQTLFTLFKPFGTIQQIKIPPGKNCGFLKYSTREEAEEAIQAM 406
Query: 339 NGTQLGGQNIRLSWGRSPSNKQ 360
G +GG +RL WGR +N +
Sbjct: 407 EGFIIGGNRVRLGWGRVSANNK 428
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQY--GQLVHVKI----PAGK-RC-GFVQFADRSCAEEAL 335
++FVG+L + T+ HL F + + V++ +GK RC GFV+F + S + AL
Sbjct: 190 SLFVGDLTASTTEAHLLSFFQKSFPNSIRTVRVMTDPVSGKSRCFGFVRFTEESERQRAL 249
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSM 394
R +NG GG+ +R++ + + P+Q N Y+ G + A PQ P+M
Sbjct: 250 REMNGAWFGGRPLRVALATPRNTALLRKSPDQKNM----YS------GLSPAVPQSPAM 298
>gi|156542291|ref|XP_001604737.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Nasonia
vitripennis]
Length = 294
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 104/182 (57%), Gaps = 13/182 (7%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGA 136
P + LW+G L+ +M E+++ F GE VKV+RN+ TG+ GY F+ F + A
Sbjct: 4 PMVLCQLWMGGLEPYMTESFVMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMA 63
Query: 137 ERVLQTFNGTPMP--NGEQNFRLNWASFG---AGEKRDDTPDHTIFVGDLAADVTDYMLQ 191
+ NG +P N + FRLN AS A E+ +++I+VGDL+ DV DY L
Sbjct: 64 LDAMHKLNGKIIPGSNPQVRFRLNHASTTGKPAAER-----EYSIWVGDLSTDVDDYSLY 118
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGP 250
TF A+Y S + AKV++D +G +KGYGFVRF +E EQ ++ MNG TR ++I
Sbjct: 119 RTFAAKYNSIRTAKVILDS-SGFSKGYGFVRFANEDEQKDSLVTMNGYRGLGTRSLKICN 177
Query: 251 AT 252
A
Sbjct: 178 AV 179
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 111/269 (41%), Gaps = 62/269 (23%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L +T+ + F + KV+ +R TG GY FV F + L AM +
Sbjct: 10 LWMGGLEPYMTESFVMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 295
+NG +I P +N + + + AS A+ + +++VG+L + V
Sbjct: 70 LNG--------KIIPGSNPQV---RFRLNHASTTGKPAAERE-----YSIWVGDLSTDVD 113
Query: 296 DEHLRELFS-QYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQ-LGGQNI 348
D L F+ +Y + K+ K GFV+FA+ +++L +NG + LG +++
Sbjct: 114 DYSLYRTFAAKYNSIRTAKVILDSSGFSKGYGFVRFANEDEQKDSLVTMNGYRGLGTRSL 173
Query: 349 RLSWGRSPSNKQAQPDPNQWN--------AGYYGYAQGY--ENYGYAAAAPQDPSMYYGG 398
++ A P P WN YA G E+Y Y D S Y+
Sbjct: 174 KIC--------NAVPRP--WNKVSDSNSAPSSSDYASGMSSESYNY-----YDTSSYWNS 218
Query: 399 YP--------------GYGNYQQPQQPQQ 413
Y GY NY ++P++
Sbjct: 219 YSAWQQGYYESEPTSDGYSNYTSDRKPEE 247
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 26/293 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F G V K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEELLIALFGTMGAVKNCKIIREPGN---DPYAFIEYSNYQAASTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFL--EKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 -------KTVSGQQQYPKASYQNSQVAQSDD-----DPNNTTVFVGNLD-SIVTDEHLRE 301
G +++Q D+ P NTTV+ G ++++D+ + +
Sbjct: 181 SSKGGGLGGGMGGGPGNGGGVKSNQRHTFDEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 302 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
F Q+G + V++ K F++F + A A+ + T++ G ++ WG+
Sbjct: 241 HFGQFGPIQDVRVFKDKGFAFIKFVTKDSAAHAIEHTHNTEVHGNLVKCFWGK 293
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 38/249 (15%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D++ T++VG+L + V++ +L F + K K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDSSVSEELLIALF-GTMGAVKNCKII--REPGNDP-YAFIEYSNYQA 57
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+T MN + +++ N T G Q PK D ++ +FVG
Sbjct: 58 ASTALTAMNKRLFLEKEIKV----NWATSPGNQ--PKT-----------DISSHHHIFVG 100
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L + E LRE F+ +G++ + +I K FV F ++ AE A++ +NG
Sbjct: 101 DLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQW 160
Query: 343 LGGQNIRLSWG-------RSPSNKQAQPDPNQWNAGYYGYAQGYENYG----YAAAAPQD 391
+G ++IR +W R S G G + + + Y ++P +
Sbjct: 161 IGSRSIRTNWSTRKLPPPRESSKGGGLGGGMGGGPGNGGGVKSNQRHTFDEVYNQSSPTN 220
Query: 392 PSMYYGGYP 400
++Y GG+P
Sbjct: 221 TTVYCGGFP 229
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 38/299 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN---DPYAFIEYSNYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA S G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MN + ++R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNRQWIASRSIRTNWSTRKLPPPRE 180
Query: 255 ------------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIVT 295
V G Q++ N P NTTV+ G ++++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYN------QSSPTNTTVYCGGFPPNVIS 234
Query: 296 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
D+ + + F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 235 DDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 334
D+ T++VGNLDS V+++ L LFS G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNK 359
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|335775520|gb|AEH58599.1| nucleolysin TIAR-like protein, partial [Equus caballus]
Length = 242
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 120/232 (51%), Gaps = 7/232 (3%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 6 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 63
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 64 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 122
Query: 245 PMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
+R AT K S Q+ K V QS P N TV+ G + S +TD+ +R+
Sbjct: 123 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQT 180
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 181 FSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 232
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 40 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 99
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 100 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 157
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF + + +V + KGY FVRF
Sbjct: 158 PKNCTVYCGGIASGLTDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAA 210
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 211 HAIVSVNG 218
>gi|326473644|gb|EGD97653.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton tonsurans CBS 112818]
Length = 470
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 122/292 (41%), Gaps = 55/292 (18%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V +VK+I +K
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKN----------------------- 138
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
R+NWA ++DT H IFVGDL+ +V D +L + F A S
Sbjct: 139 ------------EIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSA-CGS 185
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K
Sbjct: 186 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 245
Query: 255 ------------KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
T G +P Q+ + TT +VGNL T L L
Sbjct: 246 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPL 305
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 306 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 357
>gi|50311447|ref|XP_455748.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644884|emb|CAG98456.1| KLLA0F14861p [Kluyveromyces lactis]
Length = 589
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 100/179 (55%), Gaps = 12/179 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIE-----GYGFIEFISRAGAE 137
L++GDL E + + ++ GE V VK+I++ + GY F+EF ++ A
Sbjct: 58 LYMGDLNPDWTENDIKSIWSMLGEPNVQVKLIKSSNPNKSHAVNNSGYCFVEFPNQMAAS 117
Query: 138 RVLQTFNGTPMP-NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
L +G +P + +LNWASF + T+FVGDLA +VT+ L E F +
Sbjct: 118 NALMK-SGLRVPMDSNYALKLNWASFATAPGSE----FTLFVGDLAPNVTEAQLFELFIS 172
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
RY ST AK+V D+ TG +KGYGFV+F +E EQ RA+ EM G F + R +R+G + K
Sbjct: 173 RYSSTLNAKIVFDQFTGVSKGYGFVKFVNEMEQQRALVEMQGTFLNGRAIRVGTTSKNK 231
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DPNNTTVF+G L +++T++ LR F +GQ+V+VKIP GK CGFVQ+ DR AE A+ +
Sbjct: 312 DPNNTTVFIGGLSTLITEDELRSYFQPFGQIVYVKIPVGKGCGFVQYVDRISAETAISKM 371
Query: 339 NGTQLGGQNIRLSWGRS 355
G +G IRLSWGRS
Sbjct: 372 QGFPIGNSRIRLSWGRS 388
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 284 TVFVGNLDSIVTDEHLRELF-SQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALR 336
T+FVG+L VT+ L ELF S+Y ++ KI K GFV+F + + AL
Sbjct: 151 TLFVGDLAPNVTEAQLFELFISRYSSTLNAKIVFDQFTGVSKGYGFVKFVNEMEQQRALV 210
Query: 337 MLNGTQLGGQNIRLSWGRSPSNK 359
+ GT L G+ IR+ G + NK
Sbjct: 211 EMQGTFLNGRAIRV--GTTSKNK 231
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T++IG L + E L + F G++V VK+ K G GF++++ R AE +
Sbjct: 317 TVFIGGLSTLITEDELRSYFQPFGQIVYVKIPVGK------GCGFVQYVDRISAETAISK 370
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 371 MQGFPI--GNSRIRLSW 385
>gi|358334962|dbj|GAA31742.2| polyadenylate-binding protein, partial [Clonorchis sinensis]
Length = 738
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 142/293 (48%), Gaps = 43/293 (14%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL E L + F+ G V++ ++ R+ T GYG++ F AER L+
Sbjct: 2 SLYVGDLHPLATEALLYSKFSEIGTVLSARICRDLATRNSLGYGYVNFEEPKDAERALEN 61
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + IF+ +L + L +TF +
Sbjct: 62 LNYESFMGRPI-------RIMWSQRDPSLRKSGKGN--IFIKNLDKTIDQKQLYDTF-SF 111
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG---PATNK 254
K+ +D G +KGYGFV F E RA+ ++NG+ + R + +G P++++
Sbjct: 112 IGKILSCKIAMDE-HGNSKGYGFVHFEKEECAERAIEKINGMMINDRVVYVGKFIPSSDR 170
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV-- 312
K+ SG+ ++ NN ++V N TDE LR++FS++G++
Sbjct: 171 KSASGKLRF-----------------NN--IYVKNFPPDTTDEKLRDMFSEFGEIKSCCV 211
Query: 313 -KIPAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K P GK GFV F D AE+A+R+++G ++ G+ + S + +Q +
Sbjct: 212 EKNPEGKSKGFGFVCFHDPDHAEQAVRVMHGKEINGRALYASRAQRKEERQEE 264
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 21/289 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D+ L F+ G++++ K+ ++ G +GYGF+ F AER ++
Sbjct: 91 IFIKNLDKTIDQKQLYDTFSFIGKILSCKIAMDEH-GNSKGYGFVHFEKEECAERAIEKI 149
Query: 144 NGTPMPNGEQNFRLNWA-SFGAGEKRDDTPD----HTIFVGDLAADVTDYMLQETFRARY 198
NG + N R+ + F R + I+V + D TD L++ F + +
Sbjct: 150 NGMMI-----NDRVVYVGKFIPSSDRKSASGKLRFNNIYVKNFPPDTTDEKLRDMF-SEF 203
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
K V G++KG+GFV F D +A+ M+G + R + A K+
Sbjct: 204 GEIKSC-CVEKNPEGKSKGFGFVCFHDPDHAEQAVRVMHGKEINGRALYASRAQRKEE-- 260
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 316
+Q+ K + + + ++V NLD + DE L+E FS YG + K+
Sbjct: 261 -RQEELKQRLEKQRAERLSKYVPGVNLYVKNLDDNIDDERLKEAFSHYGPITSAKVMTDA 319
Query: 317 ---GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F A A+ +N T +G + + ++ + +++A+
Sbjct: 320 NGRSKGFGFVCFTQPEQAARAVTEMNATLVGSKPLYVALAQRKEDRRAK 368
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALR 336
T+++VG+L + T+ L FS+ G ++ +I G+V F + AE AL
Sbjct: 1 TSLYVGDLHPLATEALLYSKFSEIGTVLSARICRDLATRNSLGYGYVNFEEPKDAERALE 60
Query: 337 MLNGTQLGGQNIRLSWG-RSPSNKQA 361
LN G+ IR+ W R PS +++
Sbjct: 61 NLNYESFMGRPIRIMWSQRDPSLRKS 86
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 141/285 (49%), Gaps = 27/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + + L F+ G VV+V+V R+ T GY ++ F S A A R L+
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM 102
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG+ R+ +++ ++ + IF+ +L + + L +TF A + +
Sbjct: 103 LNFTPV-NGKP-IRIMYSNRDPSSRKSGAAN--IFIKNLDKSIDNKALYDTFSA-FGNIL 157
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KV + ++G +KGYGFV++ + A+ E+NG+ + + + +GP K+
Sbjct: 158 SCKVATE-MSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ------- 209
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG---QLVHVKIPAGK- 318
+ V S P V+V NL T+++L+ELF +G ++ V+ GK
Sbjct: 210 ------ERENVFGS---PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKS 260
Query: 319 RC-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
RC GFV F + A A+ LNG + + + + + S ++ Q
Sbjct: 261 RCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQ 305
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 144/290 (49%), Gaps = 21/290 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G +++ KV + +G+ +GYGF+++ A+ +
Sbjct: 131 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVA-TEMSGESKGYGFVQYEQDESAQNAINE 189
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDD---TPD-HTIFVGDLAADVTDYMLQETFRARY 198
NG + + ++ F ++R++ +P + ++V +L+ T+ L+E F
Sbjct: 190 LNGMLL----NDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFG 245
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
P T + +V+ G+++ +GFV F + + + A+ ++NG + + +G A K S
Sbjct: 246 PIT--SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKK---S 300
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKIP-- 315
++ K S++ S ++ D T +++ NLD S+ DE L+ELF+++G + K+
Sbjct: 301 EREMQLKESFEKSN-KETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD 359
Query: 316 ---AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F A AL +NG +G + + ++ + ++A+
Sbjct: 360 SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRAR 409
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L E L F + G + +V V+R G+ +GF+ F + A
Sbjct: 219 KFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHA 277
Query: 140 LQTFNGTPMPN-----------GEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVT 186
++ NG + E+ +L SF K D +++ +L V
Sbjct: 278 VEDLNGKKFDDKELYVGRAQKKSEREMQLKE-SFEKSNKETADRNQGTNLYLKNLDGSVD 336
Query: 187 D-YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
D L+E F A + + KV+ D G KG GFV F + RA+ MNG ++P
Sbjct: 337 DDEKLKELF-AEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 394
Query: 246 MRIGPATNKK 255
+ + A K+
Sbjct: 395 LYVALAQRKE 404
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 134/272 (49%), Gaps = 27/272 (9%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
QP +L++GDL+ + ++ L F+ G+VV+V+V R+ + + GY ++ F + A
Sbjct: 41 QPLPTTSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDA 100
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
R L+ N + N + R+ +++ +R + + IF+ +L + + L ETF +
Sbjct: 101 ARALEVLNFAVLNN--KPIRVMYSNRDPSSRRSGSAN--IFIKNLDKTIDNKTLHETF-S 155
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+ + KV +D G++KG+GFV++ E A+ +NG+ + +P+ +GP K+
Sbjct: 156 SFGTILSCKVAMDE-AGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGPFLRKQ- 213
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL----VHV 312
+ K + N VFV NL T E L ++F +YG + V +
Sbjct: 214 -ERDHSFDKTKFNN--------------VFVKNLSESTTKEDLLKVFGEYGSITSAVVMI 258
Query: 313 KIPAGKRC-GFVQFADRSCAEEALRMLNGTQL 343
+ RC GF+ F + A A++ LNG ++
Sbjct: 259 GMDGKSRCFGFINFENPDAASRAVQELNGKKI 290
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 145/287 (50%), Gaps = 20/287 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ F+ G +++ KV + + GQ +G+GF+++ A+ +++
Sbjct: 136 IFIKNLDKTIDNKTLHETFSSFGTILSCKVAMD-EAGQSKGFGFVQYEKEEAAQNAIKSL 194
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARYP 199
NG + N + F F ++RD + D T +FV +L+ T L + F Y
Sbjct: 195 NGM-LINDKPVF---VGPFLRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKVF-GEYG 249
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S A V+I + G+++ +GF+ F + RA+ E+NG + + +G A K S
Sbjct: 250 SITSAVVMIG-MDGKSRCFGFINFENPDAASRAVQELNGKKINDKEWYVGRAQKK---SE 305
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---- 315
++ K ++ S + + D +++ NLD + D+ LRELFS +G++ K+
Sbjct: 306 REMELKRRFEQS-LKDAADKYQGLNLYLKNLDDSIGDDQLRELFSNFGKITSYKVMRDQN 364
Query: 316 -AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
K GFV F+ R A +AL +NG + G+ + +++ + +++A
Sbjct: 365 GLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKA 411
>gi|321461699|gb|EFX72729.1| hypothetical protein DAPPUDRAFT_308097 [Daphnia pulex]
Length = 336
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 96/174 (55%), Gaps = 9/174 (5%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LWIG L+ +M E +L F GE A+KV+RNK TG G+GF +F A VL
Sbjct: 8 SLWIGGLEPYMTEEFLMRSFELMGEKPEAIKVMRNKHTGLPAGFGFCQFRDEKQAMEVLH 67
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +P + F+LN ++ G T DH ++VGDL+ADV DY L + F A+Y
Sbjct: 68 KLNGKIIPYSQPPSRFKLNHSTNTKG----STADHALWVGDLSADVDDYGLYKCFSAKYN 123
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPAT 252
S + AKVV G ++GY FV F +ES+ A+T M G + P+R+ A
Sbjct: 124 SVQLAKVVRGS-NGESRGYAFVNFSNESDYKDALTHMQGHRGLGSNPLRVSLAI 176
>gi|390601667|gb|EIN11061.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 877
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 106/211 (50%), Gaps = 39/211 (18%)
Query: 83 TLWIGDLQYWMDETYLN-TCFAHTGEVVAVKVIRNKQTGQIE-----GYGFIEFISRAGA 136
TLW G+L+ WMDE Y C V +KV + GQ GY F+ F + A A
Sbjct: 134 TLWWGNLEPWMDEEYAKQVCGLMGWNPVDIKVPSPAEAGQSAQANNPGYCFLSFSNPAQA 193
Query: 137 ERVLQTFNGT-----PMPNGEQNFRLNWASFGAGEKRDDT-------------PDHTIFV 178
VL NG MPN + F LNWAS + + +++IFV
Sbjct: 194 AAVLAQVNGNGGNAAIMPNSTRPFTLNWASSIPQSALNTSMHPPNSVPGQPFQKEYSIFV 253
Query: 179 GDLAADVTDYMLQETFRA--------RYP-------STKGAKVVIDRLTGRTKGYGFVRF 223
GDLA + ++ L FR R P S K AK+++D TG +KGYGFVRF
Sbjct: 254 GDLAPEASNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPATGVSKGYGFVRF 313
Query: 224 GDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
DE++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 314 TDEADQQRALVEMHGLYCLSRPMRISPATAK 344
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 54/77 (70%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DP NTTVFVG L +++++ LR F+ +G + +VK+P GK CGFVQF ++ AE A+ +
Sbjct: 533 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKM 592
Query: 339 NGTQLGGQNIRLSWGRS 355
G +GG IRLSWGRS
Sbjct: 593 QGFPIGGSRIRLSWGRS 609
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K G F++F+ +A AER ++
Sbjct: 538 TVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCG------FVQFVRKADAERAIEK 591
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 592 MQGFPI--GGSRIRLSW 606
>gi|50304975|ref|XP_452445.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641578|emb|CAH01296.1| KLLA0C05522p [Kluyveromyces lactis]
Length = 540
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 51/229 (22%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI------------------- 122
RTLW+GDL DE + + + G+ V VK+I++K +
Sbjct: 20 RTLWMGDLDPGFDELIIASIWQSLGKSVKVKLIKSKTNALVPINSTSIPNNASSNALEIN 79
Query: 123 --------------EGYGFIEFISRAGAERVLQTFNGTPMPN--------------GEQN 154
GY F+EF S A++ L T N TP+PN G++
Sbjct: 80 GVSFIDPNKTNLHHAGYCFVEFESFEDAQQAL-TLNATPIPNISCNTTASKRTNDDGKRK 138
Query: 155 FRLNWASFGAGEKRDD--TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLT 212
FRLNWA+ GA TP+ ++FVGDL+ T+ L F+ +Y S K +V+ D +T
Sbjct: 139 FRLNWAN-GATLHSTILPTPEFSLFVGDLSPFATEADLLSLFQTKYNSVKTVRVMTDPIT 197
Query: 213 GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
G ++ +GFVRF +E+E+ A+ EMNGV R +R+ AT + V+ Q
Sbjct: 198 GASRCFGFVRFANETERRNALIEMNGVQFQGRQLRVAYATPRNNVAQQH 246
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 47/72 (65%)
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ 342
TTVFVG L+ + + L ELF +G + VKIP GK+CGFV++ +R AE A+ L G
Sbjct: 445 TTVFVGGLNPNINELQLFELFKPFGTITDVKIPPGKQCGFVKYNERLEAEAAINGLQGFI 504
Query: 343 LGGQNIRLSWGR 354
+ G IRLSWGR
Sbjct: 505 IMGSPIRLSWGR 516
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 134/272 (49%), Gaps = 27/272 (9%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
QP +L++GDL+ + ++ L F+ G+VV+V+V R+ + + GY ++ + + A
Sbjct: 117 QPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDA 176
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
R ++ N P+ N + R+ +++ +R + + IF+ +L + + L +TF A
Sbjct: 177 ARAMEALNFAPLNN--KPIRVMYSNRDPSSRRSGSAN--IFIKNLDKTIDNKTLHDTFSA 232
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+ + KV +D + G++KG+GFV++ E AM +NG+ + +P+ +GP K+
Sbjct: 233 -FGAILSCKVAMDDI-GQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQ- 289
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL----VHV 312
+ S D VFV NL T E L ++FS+YG + V +
Sbjct: 290 ---------------ERDNSSDKAKFNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMI 334
Query: 313 KIPAGKRC-GFVQFADRSCAEEALRMLNGTQL 343
+ RC GFV F A A+ LNG ++
Sbjct: 335 GMDGKSRCFGFVNFESPDDAARAVEELNGKKI 366
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 145/288 (50%), Gaps = 20/288 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + GQ +G+GF+++ A+ +++
Sbjct: 211 NIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMD-DIGQSKGFGFVQYEKEESAQSAMKS 269
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPD----HTIFVGDLAADVTDYMLQETFRARY 198
NG + + + F ++RD++ D + +FV +L+ T L + F + Y
Sbjct: 270 LNGMLINDKP----VYVGPFLRKQERDNSSDKAKFNNVFVKNLSESTTKEDLIKVF-SEY 324
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ A V+I + G+++ +GFV F + RA+ E+NG + + +G A K S
Sbjct: 325 GTITSAVVMIG-MDGKSRCFGFVNFESPDDAARAVEELNGKKINDKEWYVGRAQKK---S 380
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP--- 315
++ K ++ S + + D +++ NLD +TD+ LRELFS +G++ KI
Sbjct: 381 EREMDLKRRFEQS-MKDAADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQ 439
Query: 316 --AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
K GFV F+ R A +AL +NG + G+ + +++ + ++A
Sbjct: 440 NGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEERKA 487
>gi|307211508|gb|EFN87603.1| tRNA selenocysteine-associated protein 1 [Harpegnathos saltator]
Length = 295
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGA 136
P + LW+G L+ +M E+++ F GE VKV+RN+ TG+ GY F+ F + A
Sbjct: 4 PMVLCQLWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMA 63
Query: 137 ERVLQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG +P N FRLN AS D + +I+VGDL+ DV DY L F
Sbjct: 64 LDAMHKLNGKVIPGSNPSVRFRLNHASTTGKPAAD--REFSIWVGDLSTDVDDYSLYRAF 121
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPAT 252
A+Y S + AKV++D +G +KGYGFVRF +E EQ +++ MNG T+ ++I A
Sbjct: 122 AAKYNSIRTAKVILDS-SGFSKGYGFVRFANEDEQKNSLSTMNGYRGLGTKSLKICNAV 179
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 106/258 (41%), Gaps = 39/258 (15%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L +T+ + F + KV+ +R TG GY FV F + L AM +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 236 MNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 295
+NG + N + +G+ P A + S ++VG+L + V
Sbjct: 70 LNGKVIPGSNPSVRFRLNHASTTGK---PAADREFS-------------IWVGDLSTDVD 113
Query: 296 DEHLRELFS-QYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQ-LGGQNI 348
D L F+ +Y + K+ K GFV+FA+ + +L +NG + LG +++
Sbjct: 114 DYSLYRAFAAKYNSIRTAKVILDSSGFSKGYGFVRFANEDEQKNSLSTMNGYRGLGTKSL 173
Query: 349 RLS------W----GRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG 398
++ W G +P + P+ N+ Y Y Y+ Y + YY
Sbjct: 174 KICNAVPRPWNKISGSTPPQSTSDYPPSNMNSDAYNY---YDTSSYWNSYSAWQQGYYES 230
Query: 399 YP---GYGNYQQPQQPQQ 413
P Y +Y Q+P++
Sbjct: 231 EPTSDAYNSYVSDQKPEE 248
>gi|119223939|gb|AAI26843.1| TIAL1 protein [Bos taurus]
Length = 279
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 120/232 (51%), Gaps = 7/232 (3%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 18 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 75
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 76 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 134
Query: 245 PMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
+R AT K S Q+ K V QS P N TV+ G + S +TD+ +R+
Sbjct: 135 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQT 192
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 193 FSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 244
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+ F
Sbjct: 54 PSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSF 113
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDDTP 172
++ AE + G + G + R NWA+ F +
Sbjct: 114 YNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPK 171
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G +A+ +TD ++++TF S G +++ KGY FVRF A
Sbjct: 172 NCTVYCGGIASGLTDQLMRQTF-----SPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHA 224
Query: 233 MTEMNG 238
+ +NG
Sbjct: 225 IVSVNG 230
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 27/284 (9%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
L++GDL + + L F+ G VV+V+V R+ T GY ++ F S A A R L+
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 103
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKG 203
N TP+ NG+ R+ +++ ++ + IF+ +L + + L +TF A + +
Sbjct: 104 NFTPV-NGKP-IRIMYSNRDPSSRKSGAAN--IFIKNLDKSIDNKALYDTFSA-FGNILS 158
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQY 263
KV + ++G +KGYGFV++ + A+ E+NG+ + + + +GP K+
Sbjct: 159 CKVATE-MSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ-------- 209
Query: 264 PKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG---QLVHVKIPAGK-R 319
+ V S P V+V NL T+++L+ELF +G ++ V+ GK R
Sbjct: 210 -----ERENVFGS---PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSR 261
Query: 320 C-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
C GFV F + A A+ LNG + + + + + S ++ Q
Sbjct: 262 CFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQ 305
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 144/290 (49%), Gaps = 21/290 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G +++ KV + +G+ +GYGF+++ A+ +
Sbjct: 131 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVA-TEMSGESKGYGFVQYEQDESAQNAINE 189
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDD---TPD-HTIFVGDLAADVTDYMLQETFRARY 198
NG + + ++ F ++R++ +P + ++V +L+ T+ L+E F
Sbjct: 190 LNGMLL----NDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFG 245
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
P T + +V+ G+++ +GFV F + + + A+ ++NG + + +G A K S
Sbjct: 246 PIT--SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKK---S 300
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKIP-- 315
++ K S++ S ++ D T +++ NLD S+ DE L+ELF+++G + K+
Sbjct: 301 EREMQLKESFEKSN-KETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD 359
Query: 316 ---AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F A AL +NG +G + + ++ + ++A+
Sbjct: 360 SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRAR 409
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L E L F + G + +V V+R G+ +GF+ F + A
Sbjct: 219 KFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHA 277
Query: 140 LQTFNGTPMPN-----------GEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVT 186
++ NG + E+ +L SF K D +++ +L V
Sbjct: 278 VEDLNGKKFDDKELYVGRAQKKSEREMQLKE-SFEKSNKETADRNQGTNLYLKNLDGSVD 336
Query: 187 D-YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
D L+E F A + + KV+ D G KG GFV F + RA+ MNG ++P
Sbjct: 337 DDEKLKELF-AEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 394
Query: 246 MRIGPATNKK 255
+ + A K+
Sbjct: 395 LYVALAQRKE 404
>gi|402218978|gb|EJT99053.1| hypothetical protein DACRYDRAFT_24132 [Dacryopinax sp. DJM-731 SS1]
Length = 474
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 103/175 (58%), Gaps = 7/175 (4%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E+ AE LQ
Sbjct: 14 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYTDMRSAETALQ 72
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + + +FVGDL+ +V D +L + F A +P+
Sbjct: 73 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDEVLAKAFAA-FPTM 129
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT
Sbjct: 130 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKT 183
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 26/184 (14%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR-LTGRTKGYGFVRFGDESEQLRAMT 234
++VG+L+ VT+YML E F P + K++ DR YGFV + D A+
Sbjct: 14 LYVGNLSPRVTEYMLTEIFAVAGP-VQHVKIIPDRNYQHGGLNYGFVEYTDMRSAETALQ 72
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
+NG +R+ A YQ Q +D + VFVG+L V
Sbjct: 73 TLNGRKIFDTEIRVNWA----------------YQGQQ--NKEDTSGHYHVFVGDLSPEV 114
Query: 295 TDEHLRELFSQYGQLVHVKI----PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNI 348
DE L + F+ + + ++ +GK GF+ F D++ AE+A+ +NG LG + I
Sbjct: 115 NDEVLAKAFAAFPTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAI 174
Query: 349 RLSW 352
R++W
Sbjct: 175 RVNW 178
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSCAE 332
P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D AE
Sbjct: 9 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYTDMRSAE 68
Query: 333 EALRMLNGTQLGGQNIRLSW 352
AL+ LNG ++ IR++W
Sbjct: 69 TALQTLNGRKIFDTEIRVNW 88
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 341
N+TV+VGNL T L LF G L +++ A + FV+ A A+ L G
Sbjct: 256 NSTVYVGNLVPFATQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHENAATAIVSLQGQ 315
Query: 342 QLGGQNIRLSWGR 354
+ G+ I++SWG+
Sbjct: 316 MIHGRPIKVSWGK 328
>gi|2281006|dbj|BAA21559.1| T-cluster binding protein [Homo sapiens]
gi|119569770|gb|EAW49385.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Homo sapiens]
Length = 265
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 120/232 (51%), Gaps = 7/232 (3%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 68
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 69 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 127
Query: 245 PMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
+R AT K S Q+ K V QS P N TV+ G + S +TD+ +R+
Sbjct: 128 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQT 185
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 186 FSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 237
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+ F
Sbjct: 47 PSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSF 106
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDDTP 172
++ AE + G + G + R NWA+ F +
Sbjct: 107 YNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPK 164
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G +A+ +TD ++++TF S G +++ KGY FVRF A
Sbjct: 165 NCTVYCGGIASGLTDQLMRQTF-----SPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHA 217
Query: 233 MTEMNG 238
+ +NG
Sbjct: 218 IVSVNG 223
>gi|32564504|ref|NP_495123.2| Protein TIAR-1, isoform e [Caenorhabditis elegans]
gi|373219013|emb|CCD65018.1| Protein TIAR-1, isoform e [Caenorhabditis elegans]
Length = 305
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 118/210 (56%), Gaps = 14/210 (6%)
Query: 152 EQNFRLNWASF-GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVID 209
++ ++NWA G + + DT H +FVGDL+++V + L+E F+ + AKV+ D
Sbjct: 8 DREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP-FGDVSDAKVIRD 66
Query: 210 RLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ----YPK 265
T ++KGYGFV + E RA+ +MNG + R +R AT K G Q+ Y +
Sbjct: 67 TNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK---PGDQEKPSHYNE 123
Query: 266 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 325
SY S D NT+V+VGN+ S+ DE +R+ F+ +G++ V+I + FV+F
Sbjct: 124 KSYDEIYNQTSGD---NTSVYVGNIASLTEDE-IRQGFASFGRITEVRIFKMQGYAFVKF 179
Query: 326 ADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
++ A +A+ +N +GGQ +R SWG++
Sbjct: 180 DNKDAAAKAIVQMNNQDVGGQLVRCSWGKT 209
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 32/187 (17%)
Query: 71 PPQQQGQPGEIRT--LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P QQQ + R +++GDL +D L F G+V KVIR+ T + +GYGF+
Sbjct: 19 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 78
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------- 174
+ R AER ++ NG + G + R NWA+ G++ + P H
Sbjct: 79 SYPKREEAERAIEQMNGQWL--GRRTIRTNWATRKPGDQ--EKPSHYNEKSYDEIYNQTS 134
Query: 175 ----TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+++VG++A+ +T+ +++ F A + ++ + +GY FV+F ++
Sbjct: 135 GDNTSVYVGNIAS-LTEDEIRQGF-ASFGRITEVRIF------KMQGYAFVKFDNKDAAA 186
Query: 231 RAMTEMN 237
+A+ +MN
Sbjct: 187 KAIVQMN 193
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 285 VFVGNLDSIVTDEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRML 338
VFVG+L S V ++ LRE F +G + K+ K GFV + R AE A+ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 339 NGTQLGGQNIRLSWG-RSPSNKQAQPDPNQWNAGYY 373
NG LG + IR +W R P + Q P+ +N Y
Sbjct: 94 NGQWLGRRTIRTNWATRKPGD---QEKPSHYNEKSY 126
>gi|307181029|gb|EFN68803.1| tRNA selenocysteine-associated protein 1 [Camponotus floridanus]
Length = 304
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 109/200 (54%), Gaps = 15/200 (7%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGA 136
P + LW+G L+ +M E+++ F GE VKV+RN+ TG+ GY F+ F + A
Sbjct: 4 PMVLCQLWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMA 63
Query: 137 ERVLQTFNGTPMP--NGEQNFRLNWASFG---AGEKRDDTPDHTIFVGDLAADVTDYMLQ 191
+ NG +P N FRLN AS A E+ + +I+VGDL+ DV DY L
Sbjct: 64 LDAMHKLNGKVIPGSNPPVRFRLNHASTTGKPAAER-----EFSIWVGDLSTDVDDYSLY 118
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGP 250
F A+Y S + AKV++D +G +KGYGFVRF +E EQ ++ MNG T+ ++I
Sbjct: 119 RAFAAKYNSIRTAKVILDS-SGFSKGYGFVRFANEEEQKNSLITMNGYRGLGTKSLKICN 177
Query: 251 ATNK--KTVSGQQQYPKASY 268
A + +SGQ Y + +
Sbjct: 178 AVPRPWNKISGQVNYIRIIF 197
>gi|32564506|ref|NP_871980.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
gi|373219014|emb|CCD65019.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
Length = 295
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 116/207 (56%), Gaps = 14/207 (6%)
Query: 155 FRLNWASF-GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLT 212
++NWA G + + DT H +FVGDL+++V + L+E F+ + AKV+ D T
Sbjct: 1 MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP-FGDVSDAKVIRDTNT 59
Query: 213 GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ----YPKASY 268
++KGYGFV + E RA+ +MNG + R +R AT K G Q+ Y + SY
Sbjct: 60 TKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK---PGDQEKPSHYNEKSY 116
Query: 269 QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADR 328
S D NT+V+VGN+ S+ DE +R+ F+ +G++ V+I + FV+F ++
Sbjct: 117 DEIYNQTSGD---NTSVYVGNIASLTEDE-IRQGFASFGRITEVRIFKMQGYAFVKFDNK 172
Query: 329 SCAEEALRMLNGTQLGGQNIRLSWGRS 355
A +A+ +N +GGQ +R SWG++
Sbjct: 173 DAAAKAIVQMNNQDVGGQLVRCSWGKT 199
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 32/187 (17%)
Query: 71 PPQQQGQPGEIRT--LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P QQQ + R +++GDL +D L F G+V KVIR+ T + +GYGF+
Sbjct: 9 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 68
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------- 174
+ R AER ++ NG + G + R NWA+ G++ + P H
Sbjct: 69 SYPKREEAERAIEQMNGQWL--GRRTIRTNWATRKPGDQ--EKPSHYNEKSYDEIYNQTS 124
Query: 175 ----TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+++VG++A+ +T+ +++ F A + ++ + +GY FV+F ++
Sbjct: 125 GDNTSVYVGNIAS-LTEDEIRQGF-ASFGRITEVRIF------KMQGYAFVKFDNKDAAA 176
Query: 231 RAMTEMN 237
+A+ +MN
Sbjct: 177 KAIVQMN 183
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 135/278 (48%), Gaps = 27/278 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL+ + E +L F+ G V +++V R+ T GY ++ F + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ + R+ W+ ++ + + IF+ +L D+ + L +TF +
Sbjct: 99 LNYTPIKG--RLCRIMWSQRDPSLRKKGSGN--IFIKNLHPDIDNKALYDTFSV-FGDIL 153
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
+K+ D G++KG+GFV F +E A+ +NG+ + + + + P ++K Q +
Sbjct: 154 SSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLE 212
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG----- 317
KA Y T ++V N++S TDE +ELF+++G +V +
Sbjct: 213 ETKAHY--------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL 258
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
K GFV + A +A+ LN ++L G+ +L GR+
Sbjct: 259 KGFGFVNYEKHEDAVKAVEALNDSELNGE--KLYVGRA 294
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 140/293 (47%), Gaps = 26/293 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G++++ K+ + + G+ +G+GF+ F A+ +
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDA 185
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT------IFVGDLAADVTDYMLQETFRA 196
NG + NG++ + A + ++RD + T ++V ++ ++ TD QE F A
Sbjct: 186 LNGMLL-NGQEIY---VAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELF-A 240
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA--TNK 254
++ A + D G+ KG+GFV + + ++A+ +N + + +G A N+
Sbjct: 241 KFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNE 299
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
+ ++QY +Y+ ++A+ +FV NLD V DE L E F+ YG + K+
Sbjct: 300 RMHVLKKQYE--AYRLEKMAKY----QGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKV 353
Query: 315 P-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ N + G+ + ++ + +++Q
Sbjct: 354 MRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQ 406
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 160 ASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
A+ G+ + + +++VGDL V++ L + F + S +V D +T + GY
Sbjct: 24 AATGSESQSVENSSASLYVGDLEPSVSEAHLYDIF-SPIGSVSSIRVCRDAITKTSLGYA 82
Query: 220 FVRFGDESEQLRAMTEMN-----GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVA 274
+V F D +A+ ++N G C + P+ KK SG
Sbjct: 83 YVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKG-SG--------------- 126
Query: 275 QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRS 329
+F+ NL + ++ L + FS +G ++ KI K GFV F +
Sbjct: 127 ---------NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEG 177
Query: 330 CAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
A+EA+ LNG L GQ I ++ S + +Q
Sbjct: 178 AAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQ 210
>gi|119569771|gb|EAW49386.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Homo sapiens]
Length = 282
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 120/232 (51%), Gaps = 7/232 (3%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 85
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 86 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 144
Query: 245 PMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 302
+R AT K S Q+ K V QS P N TV+ G + S +TD+ +R+
Sbjct: 145 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQS--SPKNCTVYCGGIASGLTDQLMRQT 202
Query: 303 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 203 FSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 254
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+ F
Sbjct: 64 PSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSF 123
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDDTP 172
++ AE + G + G + R NWA+ F +
Sbjct: 124 YNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPK 181
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G +A+ +TD ++++TF + + +V + KGY FVRF A
Sbjct: 182 NCTVYCGGIASGLTDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHA 234
Query: 233 MTEMNG 238
+ +NG
Sbjct: 235 IVSVNG 240
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 135/278 (48%), Gaps = 27/278 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL+ + E +L F+ G V +++V R+ T GY ++ F + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ + R+ W+ ++ + + IF+ +L D+ + L +TF +
Sbjct: 99 LNYTPIKG--RLCRIMWSQRDPSLRKKGSGN--IFIKNLHPDIDNKALYDTFSV-FGDIL 153
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
+K+ D G++KG+GFV F +E A+ +NG+ + + + + P ++K Q +
Sbjct: 154 SSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLE 212
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG----- 317
KA Y T ++V N++S TDE +ELF+++G +V +
Sbjct: 213 ETKAHY--------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL 258
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
K GFV + A +A+ LN ++L G+ +L GR+
Sbjct: 259 KGFGFVNYEKHEDAVKAVEALNDSELNGE--KLYVGRA 294
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 140/293 (47%), Gaps = 26/293 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G++++ K+ + + G+ +G+GF+ F A+ +
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDA 185
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT------IFVGDLAADVTDYMLQETFRA 196
NG + NG++ + A + ++RD + T ++V ++ ++ TD QE F A
Sbjct: 186 LNGMLL-NGQEIY---VAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELF-A 240
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA--TNK 254
++ A + D G+ KG+GFV + + ++A+ +N + + +G A N+
Sbjct: 241 KFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNE 299
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
+ ++QY +Y+ ++A+ +FV NLD V DE L E F+ YG + K+
Sbjct: 300 RMHVLKKQYE--AYRLEKMAKY----QGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKV 353
Query: 315 P-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ N + G+ + ++ + +++Q
Sbjct: 354 MRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQ 406
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 36/213 (16%)
Query: 160 ASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
A+ G+ + + +++VGDL V++ L + F + S +V D +T + GY
Sbjct: 24 AATGSESQSVENSSASLYVGDLEPSVSEAHLYDIF-SPIGSVSSIRVCRDAITKTSLGYA 82
Query: 220 FVRFGDESEQLRAMTEMN-----GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVA 274
+V F D +A+ ++N G C + P+ KK
Sbjct: 83 YVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKK------------------- 123
Query: 275 QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRS 329
+ +F+ NL + ++ L + FS +G ++ KI K GFV F +
Sbjct: 124 ------GSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEG 177
Query: 330 CAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
A+EA+ LNG L GQ I ++ S + +Q
Sbjct: 178 AAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQ 210
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 135/278 (48%), Gaps = 27/278 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL+ + E +L F+ G V +++V R+ T GY ++ F + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ + R+ W+ ++ + + IF+ +L D+ + L +TF +
Sbjct: 99 LNYTPIKG--RLCRIMWSQRDPSLRKKGSGN--IFIKNLHPDIDNKALYDTFSV-FGDIL 153
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
+K+ D G++KG+GFV F +E A+ +NG+ + + + + P ++K Q +
Sbjct: 154 SSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLE 212
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG----- 317
KA Y T ++V N++S TDE +ELF+++G +V +
Sbjct: 213 ETKAHY--------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL 258
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
K GFV + A +A+ LN ++L G+ +L GR+
Sbjct: 259 KGFGFVNYEKHEDAVKAVEALNDSELNGE--KLYVGRA 294
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 140/293 (47%), Gaps = 26/293 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G++++ K+ + + G+ +G+GF+ F A+ +
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDA 185
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT------IFVGDLAADVTDYMLQETFRA 196
NG + NG++ + A + ++RD + T ++V ++ ++ TD QE F A
Sbjct: 186 LNGMLL-NGQEIY---VAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELF-A 240
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA--TNK 254
++ A + D G+ KG+GFV + + ++A+ +N + + +G A N+
Sbjct: 241 KFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNE 299
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
+ ++QY +Y+ ++A+ +FV NLD V DE L E F+ YG + K+
Sbjct: 300 RMHVLKKQYE--AYRLEKMAKY----QGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKV 353
Query: 315 P-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ N + G+ + ++ + +++Q
Sbjct: 354 MRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQ 406
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 36/213 (16%)
Query: 160 ASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
A+ G+ + + +++VGDL V++ L + F + S +V D +T + GY
Sbjct: 24 AATGSESQSVENSSASLYVGDLEPSVSEAHLYDIF-SPIGSVSSIRVCRDAITKTSLGYA 82
Query: 220 FVRFGDESEQLRAMTEMN-----GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVA 274
+V F D +A+ ++N G C + P+ KK
Sbjct: 83 YVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKK------------------- 123
Query: 275 QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRS 329
+ +F+ NL + ++ L + FS +G ++ KI K GFV F +
Sbjct: 124 ------GSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEG 177
Query: 330 CAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
A+EA+ LNG L GQ I ++ S + +Q
Sbjct: 178 AAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQ 210
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 135/278 (48%), Gaps = 27/278 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL+ + E +L F+ G V +++V R+ T GY ++ F + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ + R+ W+ ++ + + IF+ +L D+ + L +TF +
Sbjct: 99 LNYTPIKG--RLCRIMWSQRDPSLRKKGSGN--IFIKNLHPDIDNKALYDTFSV-FGDIL 153
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
+K+ D G++KG+GFV F +E A+ +NG+ + + + + P ++K Q +
Sbjct: 154 SSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLE 212
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG----- 317
KA Y T ++V N++S TDE +ELF+++G +V +
Sbjct: 213 ETKAHY--------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL 258
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
K GFV + A +A+ LN ++L G+ +L GR+
Sbjct: 259 KGFGFVNYEKHEDAVKAVEALNDSELNGE--KLYVGRA 294
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 140/293 (47%), Gaps = 26/293 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G++++ K+ + + G+ +G+GF+ F A+ +
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDA 185
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT------IFVGDLAADVTDYMLQETFRA 196
NG + NG++ + A + ++RD + T ++V ++ ++ TD QE F A
Sbjct: 186 LNGMLL-NGQEIY---VAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELF-A 240
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA--TNK 254
++ A + D G+ KG+GFV + + ++A+ +N + + +G A N+
Sbjct: 241 KFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNE 299
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
+ ++QY +Y+ ++A+ +FV NLD V DE L E F+ YG + K+
Sbjct: 300 RMHVLKKQYE--AYRLEKMAKY----QGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKV 353
Query: 315 P-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ N + G+ + ++ + +++Q
Sbjct: 354 MRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQ 406
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 36/213 (16%)
Query: 160 ASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
A+ G+ + + +++VGDL V++ L + F + S +V D +T + GY
Sbjct: 24 AATGSESQSVENSSASLYVGDLEPSVSEAHLYDIF-SPIGSVSSIRVCRDAITKTSLGYA 82
Query: 220 FVRFGDESEQLRAMTEMN-----GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVA 274
+V F D +A+ ++N G C + P+ KK
Sbjct: 83 YVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKK------------------- 123
Query: 275 QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRS 329
+ +F+ NL + ++ L + FS +G ++ KI K GFV F +
Sbjct: 124 ------GSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEG 177
Query: 330 CAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
A+EA+ LNG L GQ I ++ S + +Q
Sbjct: 178 AAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQ 210
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 143/285 (50%), Gaps = 27/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + + L F+ G VV+V+V R+ T GY ++ F S A A R ++
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAMEM 102
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG+ R+ +++ ++ + IF+ +L + + L +TF A + +
Sbjct: 103 LNFTPV-NGKP-IRIMYSNRDPSSRKSGAAN--IFIKNLDKSIDNKALFDTFSA-FGTIL 157
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KV + ++G +KGYGFV++ + A+ E+NG+ + + + +GP K+
Sbjct: 158 SCKVATE-ISGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ------- 209
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG---QLVHVKIPAGK- 318
+ V S P V+V NL T+++L+E+F ++G ++ V+ GK
Sbjct: 210 ------ERENVFGS---PKFNNVYVKNLSESTTEDNLKEMFGKFGPITSVIVVRADDGKS 260
Query: 319 RC-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
RC GFV F + A A+ LNG +L + + + + S ++ Q
Sbjct: 261 RCFGFVNFENPDDAARAVEDLNGKKLDDKELYVGRAQKKSEREMQ 305
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 141/290 (48%), Gaps = 21/290 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G +++ KV + +G+ +GYGF+++ A+ +
Sbjct: 131 NIFIKNLDKSIDNKALFDTFSAFGTILSCKVA-TEISGESKGYGFVQYEQDESAQNAINE 189
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDD---TPD-HTIFVGDLAADVTDYMLQETFRARY 198
NG + + ++ F ++R++ +P + ++V +L+ T+ L+E F
Sbjct: 190 LNGMLL----NDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKEMFGKFG 245
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
P T + +V+ G+++ +GFV F + + RA+ ++NG + + +G A KK+
Sbjct: 246 PIT--SVIVVRADDGKSRCFGFVNFENPDDAARAVEDLNGKKLDDKELYVGRA-QKKSER 302
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKIP-- 315
Q K N + A D T +++ NLD S+ DE L+ELF+++G + K+
Sbjct: 303 EMQLKEKFEKSNKETA---DKNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD 359
Query: 316 ---AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F A AL +NG +G + + ++ + ++A+
Sbjct: 360 SNGVNKGSGFVAFKSSEDASRALVAMNGKMVGSKPLYVALAQRKEERRAR 409
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 16/189 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L E L F G + +V V+R G+ +GF+ F + A R
Sbjct: 219 KFNNVYVKNLSESTTEDNLKEMFGKFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAARA 277
Query: 140 LQTFNGTPMPN-----------GEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTD 187
++ NG + + E+ +L + ++ D T +++ +L V D
Sbjct: 278 VEDLNGKKLDDKELYVGRAQKKSEREMQLKEKFEKSNKETADKNQGTNLYLKNLDGSVDD 337
Query: 188 -YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
L+E F A + + KV+ D G KG GFV F + RA+ MNG ++P+
Sbjct: 338 DEKLKELF-AEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDASRALVAMNGKMVGSKPL 395
Query: 247 RIGPATNKK 255
+ A K+
Sbjct: 396 YVALAQRKE 404
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 151/317 (47%), Gaps = 43/317 (13%)
Query: 48 PQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
P AQ A AT AP GVA+ G P +L++GDL+ ++E L F+ +
Sbjct: 8 PMAQSVAAAATPVIAP---GVALG----GGPFANASLYVGDLEGNVNEEQLYDLFSQVAQ 60
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK 167
+ +++V R++ GY ++ F + A ++ N TP+ NG+ R+ ++ +
Sbjct: 61 IASIRVCRDQTKRSSLGYAYVNFANAQDASNAMELLNFTPL-NGKP-IRIMFS------Q 112
Query: 168 RDDTPDHT----IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRF 223
RD + + +F+ +L + + L +TF A + + KV +D +G++KGYGFV+F
Sbjct: 113 RDPSIRKSGHGNVFIKNLDTSIDNKALHDTF-AAFGTVLSCKVALDS-SGQSKGYGFVQF 170
Query: 224 GDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNT 283
+E A+ +NG+ + + + +G ++ + Q++ P T
Sbjct: 171 DNEEAAQNAIKRLNGMLINDKQVYVGLFIRRQ----------------EREQTNGSPKFT 214
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQL----VHVKIPAGKRC-GFVQFADRSCAEEALRML 338
V+V NL TDE L++LF YG + V + RC GFV F + A A+ L
Sbjct: 215 NVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERL 274
Query: 339 NGTQLGGQNIRLSWGRS 355
NGT + + L GR+
Sbjct: 275 NGTTINNDRV-LYVGRA 290
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 144/287 (50%), Gaps = 15/287 (5%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G V++ KV + +GQ +GYGF++F + A+ ++
Sbjct: 124 NVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDS-SGQSKGYGFVQFDNEEAAQNAIKR 182
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPST 201
NG + N +Q + + E+ + +P T ++V +L+ TD L++ F Y +
Sbjct: 183 LNGM-LINDKQVYVGLFIRRQEREQTNGSPKFTNVYVKNLSETYTDEDLKKLF-GPYGTI 240
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST-RPMRIGPATNKKTVSGQ 260
A V+ D + G+++ +GFV F + A+ +NG + R + +G A K + +
Sbjct: 241 TSATVMKD-VNGKSRCFGFVNFQNPDSAAAAVERLNGTTINNDRVLYVGRAQRK---AER 296
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---- 316
+ KA + ++++ + +++ NLD +DE L++LFS++G + K+
Sbjct: 297 EAELKAKIEQERISRYEK-LQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNG 355
Query: 317 -GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +AL +NG +G + + ++ + ++A
Sbjct: 356 RSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVAVAQRKEERKAH 402
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 23/199 (11%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
Q G P + +++ +L + L F G + + V+++ G+ +GF+ F +
Sbjct: 206 QTNGSP-KFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDV-NGKSRCFGFVNFQN 263
Query: 133 RAGAERVLQTFNGTPMPN----------------GEQNFRLNWASFGAGEKRDDTPDHTI 176
A ++ NGT + N E ++ EK +
Sbjct: 264 PDSAAAAVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGA---NL 320
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
++ +L +D L++ F + + + KV+ID GR+KG GFV F E +A+ EM
Sbjct: 321 YLKNLDDSFSDEKLKDLF-SEFGTITSCKVMIDS-NGRSKGSGFVSFSTPEEASKALNEM 378
Query: 237 NGVFCSTRPMRIGPATNKK 255
NG +P+ + A K+
Sbjct: 379 NGKLIGRKPLYVAVAQRKE 397
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--PAGKRC----GFVQFADRSCAEEAL 335
N +++VG+L+ V +E L +LFSQ Q+ +++ KR +V FA+ A A+
Sbjct: 34 NASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAM 93
Query: 336 RMLNGTQLGGQNIRLSWG-RSPSNKQA 361
+LN T L G+ IR+ + R PS +++
Sbjct: 94 ELLNFTPLNGKPIRIMFSQRDPSIRKS 120
>gi|147797908|emb|CAN69464.1| hypothetical protein VITISV_023045 [Vitis vinifera]
Length = 844
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 47/290 (16%)
Query: 111 VKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD 170
+ V+ + YGF++++ RA A + T +G + Q ++NWA + +G++ D
Sbjct: 170 IVVVFQASLSSLSSYGFVDYLDRASASLAIMTLHGRQVYG--QALKVNWA-YASGQREDT 226
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ IFVGDL+ +VTD L F + S A+V+ D TGR+KGYGFV F ++ +
Sbjct: 227 SGHFNIFVGDLSPEVTDATLYACFSV-FASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQ 285
Query: 231 RAMTEMNGVFCSTRPMRIGPAT-------------NKKTVSGQQQYPKASYQNSQVAQSD 277
A+ +++G + R +R AT N+ V S +N+ +
Sbjct: 286 SAINDLSGKWLGNRQIRCNWATKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAPE 345
Query: 278 DDPNNTTVFVGNLDSIVTDEHL---------RELFS----------------QY-----G 307
++P TTV+VGNL E + R +FS Q+ G
Sbjct: 346 NNPAYTTVYVGNLSHEFLTEIIIFSGFLSVVRSIFSLTFDLCAQVTQAELHCQFHALGAG 405
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357
+ V+I K GFV++ A A++M NG + G++++ SWG P+
Sbjct: 406 VIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSKPT 455
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 56/218 (25%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + + L CF+ +V+ + +TG+ +GYGF+ F ++ A+ +
Sbjct: 232 IFVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDL 291
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRD--------------------------DTPDH--- 174
+G + G + R NWA+ GAG D + P++
Sbjct: 292 SGKWL--GNRQIRCNWATKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPA 349
Query: 175 --TIFVGDLAAD-VTDYMLQETF----RARYPST------------------KGAKVVID 209
T++VG+L+ + +T+ ++ F R+ + T GA V+ +
Sbjct: 350 YTTVYVGNLSHEFLTEIIIFSGFLSVVRSIFSLTFDLCAQVTQAELHCQFHALGAGVIEE 409
Query: 210 RLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
R KG+GFVR+ E A+ NG + M+
Sbjct: 410 VRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMK 447
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 130/274 (47%), Gaps = 25/274 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + E L F+ G V +++V R+ T GY ++ F ++ ++
Sbjct: 36 SLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIEQ 95
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ + R+ W+ ++ + + IF+ +L D+ + L ETF + +
Sbjct: 96 LNYTPIKG--RLCRIMWSQRDPALRKKGSGN--IFIKNLHPDIDNKALFETFSV-FGNIL 150
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
+K+ D TG++KG+GFV F ES A+ +NG+ + + + + P +K Q +
Sbjct: 151 SSKIATDE-TGKSKGFGFVHFEHESSAKEAIDALNGMLLNGQEIYVAPHLTRKERDSQLE 209
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG----- 317
KA + T V+V N++ TDE ELF++YG ++ +
Sbjct: 210 ETKAHF--------------TNVYVKNINLETTDEEFNELFAKYGNVLSSSLEKTEDGKL 255
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351
K GFV F A +A+ LNGT+ Q + +S
Sbjct: 256 KGFGFVDFEKHEDAAKAVEELNGTEFKDQTLFVS 289
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 136/290 (46%), Gaps = 22/290 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ K+ + +TG+ +G+GF+ F + A+ +
Sbjct: 125 IFIKNLHPDIDNKALFETFSVFGNILSSKIATD-ETGKSKGFGFVHFEHESSAKEAIDAL 183
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT------IFVGDLAADVTDYMLQETFRAR 197
NG + NG++ + A ++RD + T ++V ++ + TD E F A+
Sbjct: 184 NGMLL-NGQE---IYVAPHLTRKERDSQLEETKAHFTNVYVKNINLETTDEEFNELF-AK 238
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y + + + G+ KG+GFV F + +A+ E+NG + + + A K
Sbjct: 239 YGNVLSSSLEKTE-DGKLKGFGFVDFEKHEDAAKAVEELNGTEFKDQTLFVSRAQKKYE- 296
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-- 315
+ Q K Y+ S++ + +FV NLD + DE L+E F+ YG + V++
Sbjct: 297 --RMQELKKQYEASRLEKMAK-YQGVNLFVKNLDDSIDDEKLKEEFAPYGTITSVRVMRT 353
Query: 316 ---AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ N + G+ + ++ + +++Q
Sbjct: 354 DNGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQ 403
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 269 QNSQVAQSDDDPNN--------TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 320
+N ++++S+D P+ +++VG LD V++ L ++FS G + +++
Sbjct: 13 ENLKISESEDQPSTTTSTETSPASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVT 72
Query: 321 ------GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG-RSPS 357
+V F D ++A+ LN T + G+ R+ W R P+
Sbjct: 73 KTSLGYAYVNFNDHEAGKKAIEQLNYTPIKGRLCRIMWSQRDPA 116
>gi|302755232|ref|XP_002961040.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
gi|300171979|gb|EFJ38579.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
Length = 625
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 136/284 (47%), Gaps = 30/284 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + ET L T F+ G V +V+V R+ T + GYG++ + S A A R ++
Sbjct: 38 SLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEA 97
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG + R+ W+ ++ + IF+ +L + + L +TF A P
Sbjct: 98 LNYTPI-NG-KTIRIMWSHRDPSTRKSGVGN--IFIKNLDESIDNKALHDTFIAFGPILS 153
Query: 203 GAKVVIDRLTGRTKGYGFVRF-GDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
I GR+KGYGFV F DE+ L A+ ++NG+ + G++
Sbjct: 154 CK---IAHQDGRSKGYGFVHFETDEAANL-AIEKVNGM----------------QLVGKK 193
Query: 262 QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-----PA 316
+ + S + + T VFV NLD + +E + E FS +G + +V I
Sbjct: 194 VFVAKFVKRSDRLAATGETKFTNVFVKNLDPEMAEEEINEHFSTFGVITNVVIMKDENDK 253
Query: 317 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
K GFV F D A A+ +N +QLG + I + + + ++
Sbjct: 254 SKGFGFVNFDDPEAARAAVETMNNSQLGSRTIYVGRAQKKAERE 297
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 134/314 (42%), Gaps = 46/314 (14%)
Query: 55 MWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI 114
MW+ + + + +GV ++I +L +D L+ F G +++ K+
Sbjct: 111 MWSHRDPSTRKSGVG-------------NIFIKNLDESIDNKALHDTFIAFGPILSCKIA 157
Query: 115 RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD---- 170
Q G+ +GYGF+ F + A ++ NG + G++ F + KR D
Sbjct: 158 H--QDGRSKGYGFVHFETDEAANLAIEKVNGMQLV-GKKVFVAKFV------KRSDRLAA 208
Query: 171 ---TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA---KVVIDRLTGRTKGYGFVRFG 224
T +FV +L ++ + + E F ST G V++ ++KG+GFV F
Sbjct: 209 TGETKFTNVFVKNLDPEMAEEEINEHF-----STFGVITNVVIMKDENDKSKGFGFVNFD 263
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTT 284
D A+ MN +R + +G A K + ++Q + ++ ++ Q
Sbjct: 264 DPEAARAAVETMNNSQLGSRTIYVGRAQKK---AEREQILRRQFEEKRMEQFQK-YQGAN 319
Query: 285 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLN 339
++V NLD + DE L++ FS+YG + K+ K GFV F A A N
Sbjct: 320 LYVKNLDDSIDDETLKQEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETN 379
Query: 340 GTQLGGQNIRLSWG 353
G + G+ I ++
Sbjct: 380 GLMINGKPIYVAMA 393
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 19/187 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++ +L M E +N F+ G + V VI + + +G+GF+ F A ++T
Sbjct: 217 VFVKNLDPEMAEEEINEHFSTFGVITNV-VIMKDENDKSKGFGFVNFDDPEAARAAVETM 275
Query: 144 NGTPMPNGEQNFRLNWASFGAG----------EKRDDTPDH----TIFVGDLAADVTDYM 189
N + + G + + A A EKR + ++V +L + D
Sbjct: 276 NNSQL--GSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSIDDET 333
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L++ F +RY + AKV+ D G +KG+GFV F E RA TE NG+ + +P+ +
Sbjct: 334 LKQEF-SRYGNITSAKVMRDE-KGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVA 391
Query: 250 PATNKKT 256
A K+
Sbjct: 392 MAQRKEI 398
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 151/317 (47%), Gaps = 43/317 (13%)
Query: 48 PQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
P AQ A AT AP GVA+ G P +L++GDL+ ++E L F+ +
Sbjct: 8 PMAQSVAAAATPVIAP---GVAL----GGGPFANASLYVGDLEGNVNEEQLYDLFSQVAQ 60
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK 167
+ +++V R++ GY ++ F + A ++ N TP+ NG+ R+ ++ +
Sbjct: 61 IASIRVCRDQTKRSSLGYAYVNFANAQDASNAMELLNFTPL-NGKP-IRIMFS------Q 112
Query: 168 RDDTPDHT----IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRF 223
RD + + +F+ +L + + L +TF A + + KV +D +G++KGYGFV+F
Sbjct: 113 RDPSIRKSGHGNVFIKNLDTSIDNKALHDTF-AAFGTVLSCKVALDS-SGQSKGYGFVQF 170
Query: 224 GDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNT 283
+E A+ +NG+ + + + +G ++ + Q++ P T
Sbjct: 171 DNEEAAQNAIKRLNGMLINDKQVYVGLFIRRQ----------------EREQTNGSPKFT 214
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQL----VHVKIPAGKRC-GFVQFADRSCAEEALRML 338
V+V NL TDE L++LF YG + V + RC GFV F + A A+ L
Sbjct: 215 NVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERL 274
Query: 339 NGTQLGGQNIRLSWGRS 355
NGT + + L GR+
Sbjct: 275 NGTTINNDRV-LYVGRA 290
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 144/286 (50%), Gaps = 15/286 (5%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ FA G V++ KV + +GQ +GYGF++F + A+ ++
Sbjct: 125 VFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDS-SGQSKGYGFVQFDNEEAAQNAIKRL 183
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPSTK 202
NG + N +Q + + E+ + +P T ++V +L+ TD L++ F Y +
Sbjct: 184 NGM-LINDKQVYVGLFIRRQEREQTNGSPKFTNVYVKNLSETYTDEDLKKLF-GPYGTIT 241
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST-RPMRIGPATNKKTVSGQQ 261
A V+ D + G+++ +GFV F + A+ +NG + R + +G A K + ++
Sbjct: 242 SATVMKD-VNGKSRCFGFVNFQNPDSAAAAVERLNGTTINNDRVLYVGRAQRK---AERE 297
Query: 262 QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA----- 316
KA + ++++ + +++ NLD +DE L++LFS++G + K+
Sbjct: 298 AELKAKIEQERISRYEK-LQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGR 356
Query: 317 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +AL +NG +G + + ++ + ++A
Sbjct: 357 SKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVAVAQRKEERKAH 402
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 23/199 (11%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
Q G P + +++ +L + L F G + + V+++ G+ +GF+ F +
Sbjct: 206 QTNGSP-KFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDV-NGKSRCFGFVNFQN 263
Query: 133 RAGAERVLQTFNGTPMPN----------------GEQNFRLNWASFGAGEKRDDTPDHTI 176
A ++ NGT + N E ++ EK +
Sbjct: 264 PDSAAAAVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGA---NL 320
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
++ +L +D L++ F + + + KV+ID GR+KG GFV F E +A+ EM
Sbjct: 321 YLKNLDDSFSDEKLKDLF-SEFGTITSCKVMIDS-NGRSKGSGFVSFSTPEEASKALNEM 378
Query: 237 NGVFCSTRPMRIGPATNKK 255
NG +P+ + A K+
Sbjct: 379 NGKLIGRKPLYVAVAQRKE 397
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG--KRC----GFVQFADRSCAEEAL 335
N +++VG+L+ V +E L +LFSQ Q+ +++ KR +V FA+ A A+
Sbjct: 34 NASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAM 93
Query: 336 RMLNGTQLGGQNIRLSWG-RSPSNKQA 361
+LN T L G+ IR+ + R PS +++
Sbjct: 94 ELLNFTPLNGKPIRIMFSQRDPSIRKS 120
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 137/290 (47%), Gaps = 36/290 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVVKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--- 314
+ + N V++ N + DE L+ELF +YG+ + VK+
Sbjct: 180 EAELGAKAKEFTN--------------VYIKNFGDDMDDERLKELFDKYGKTLSVKVMMD 225
Query: 315 PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
P GK GFV + A +A+ +NGT+L G+ + + + + +QA+
Sbjct: 226 PTGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAE 275
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 138/289 (47%), Gaps = 22/289 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 144 NGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG + + + ++ + A GA K +++ + D+ D L+E F +
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKELF-DK 213
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y T KV++D TG+++G+GFV + + +A+ +MNG + + + +G A K
Sbjct: 214 YGKTLSVKVMMDP-TGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNER 272
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA- 316
+ + + ++++ +++ NLD + DE LR+ FS +G + K+
Sbjct: 273 QAELKRKFEMLKQERISRY----QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE 328
Query: 317 ---GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 329 EGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL D+T+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVVKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F G+ ++VKV+ + TG+ G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDP-TGKSRGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NGT + NG+ F G +K+++ +++ +
Sbjct: 248 VEDMNGTEL-NGKTVF------VGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKK 255
++P+ + A K+
Sbjct: 358 VGSKPLYVALAQRKE 372
>gi|432097499|gb|ELK27684.1| Polyadenylate-binding protein 4-like protein [Myotis davidii]
Length = 370
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 139/285 (48%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V+++++ R+ T GY ++ F+ A A+R L T
Sbjct: 11 SLYVGDLPPDVTENMLFLKFSTVGTVLSIRICRDLVTRCSLGYAYVNFLHVADAQRALDT 70
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + Q+ RL W+ A ++ + +F+ +L + + L E F +
Sbjct: 71 MNFDVIQG--QSIRLMWSQRDAYLRKSGIGN--VFIKNLDKSIDNKTLYEHFSV-FGKIL 125
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
+KV+ D R GYGFV F +++ RA+ EMNGV + +GP N++ + Q
Sbjct: 126 SSKVMCDDQGSR--GYGFVHFQNQAAADRAIEEMNGVLLKDFRLFVGPFKNRRDREAELQ 183
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ + T +++ N + DE L+E FS YG++V VK+ +GK
Sbjct: 184 NKASEF--------------TNIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTDSSGKS 229
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV F A+ A+ ++NG ++ GQ + + + + +QA+
Sbjct: 230 KGFGFVSFDTHEAAKRAVDIVNGREIFGQQVFVGRAQKKAERQAE 274
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 147/309 (47%), Gaps = 37/309 (11%)
Query: 55 MWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI 114
MW+ + A + +G+ ++I +L +D L F+ G++++ KV+
Sbjct: 84 MWSQRDAYLRKSGIG-------------NVFIKNLDKSIDNKTLYEHFSVFGKILSSKVM 130
Query: 115 RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG-----AGEKRD 169
+ Q + GYGF+ F ++A A+R ++ NG + ++FRL F E ++
Sbjct: 131 CDDQGSR--GYGFVHFQNQAAADRAIEEMNGVLL----KDFRLFVGPFKNRRDREAELQN 184
Query: 170 DTPDHT-IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+ T I++ + ++ D L+E F + Y KV+ D +G++KG+GFV F
Sbjct: 185 KASEFTNIYIKNFGDEMDDEKLKEFF-SHYGKIVSVKVMTDS-SGKSKGFGFVSFDTHEA 242
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
RA+ +NG + + +G A +K Q + + Q Q + T ++V
Sbjct: 243 AKRAVDIVNGREIFGQQVFVGRA--QKKAERQAELKQLFEQRKQ--ERSWRVRGTKIYVK 298
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKI--PAGKRCGF--VQFADRSCAEEALRMLNGTQLG 344
NLD + +E LR+ FS +G ++ VK+ G+ GF + F+ A A+ +NG LG
Sbjct: 299 NLDETIDEEKLRKAFSSFGSIIRVKVMQEEGRSRGFGLICFSSPEEAARAMAEMNGRLLG 358
Query: 345 GQ--NIRLS 351
+ NI L+
Sbjct: 359 SKPVNIALA 367
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 135/278 (48%), Gaps = 27/278 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL+ + E +L F+ G V +++V R+ T GY ++ F + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ + R+ W+ ++ + + IF+ +L D+ + L +TF +
Sbjct: 99 LNYTPIKG--RLCRIMWSQRDPSLRKKGSGN--IFIKNLHPDIDNKALYDTFSV-FGDIL 153
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
+K+ D G++KG+GFV F +E A+ +NG+ + + + + P ++K Q +
Sbjct: 154 SSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLE 212
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG----- 317
KA Y T ++V N++S TDE +ELF+++G +V +
Sbjct: 213 ETKAHY--------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL 258
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
K GFV + A +A+ LN ++L G+ +L GR+
Sbjct: 259 KGFGFVNYEKHEDAVKAVEALNDSELNGE--KLYVGRA 294
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 140/293 (47%), Gaps = 26/293 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G++++ K+ + + G+ +G+GF+ F A+ +
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDA 185
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT------IFVGDLAADVTDYMLQETFRA 196
NG + NG++ + A + ++RD + T ++V ++ ++ TD QE F A
Sbjct: 186 LNGMLL-NGQEIY---VAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELF-A 240
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA--TNK 254
++ A + D G+ KG+GFV + + ++A+ +N + + +G A N+
Sbjct: 241 KFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNE 299
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
+ ++QY +Y+ ++A+ +FV NLD V DE L E F+ YG + K+
Sbjct: 300 RMHVLKKQYE--AYRLEKMAKY----QGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKV 353
Query: 315 P-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ N + G+ + ++ + +++Q
Sbjct: 354 MRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQ 406
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 36/213 (16%)
Query: 160 ASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
A+ G+ + + +++VGDL V++ L + F + S +V D +T + GY
Sbjct: 24 AATGSESQSVENSSASLYVGDLEPSVSEAHLYDIF-SPIGSVSSIRVCRDAITKTSLGYA 82
Query: 220 FVRFGDESEQLRAMTEMN-----GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVA 274
+V F D +A+ ++N G C + P+ KK
Sbjct: 83 YVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKK------------------- 123
Query: 275 QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRS 329
+ +F+ NL + ++ L + FS +G ++ KI K GFV F +
Sbjct: 124 ------GSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEG 177
Query: 330 CAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
A+EA+ LNG L GQ I ++ S + +Q
Sbjct: 178 AAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQ 210
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 146/289 (50%), Gaps = 20/289 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + +GQ +GYGF++F + A++ ++
Sbjct: 123 NIFIKNLDKAIDHKALHDTFSSFGNILSCKVAVDG-SGQSKGYGFVQFDTEEAAQKAIEK 181
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPD----HTIFVGDLAADVTDYMLQETFRARY 198
NG + N +Q + F ++R+ T D + +FV +L+ TD L++TF +
Sbjct: 182 LNGMLL-NDKQVY---VGPFLRKQERESTGDRAKFNNVFVKNLSESTTDDELKKTF-GEF 236
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ A V+ D G++K +GFV F + RA+ +NG + +G A K S
Sbjct: 237 GTITSAVVMRDG-DGKSKCFGFVNFESTDDAARAVEALNGKKIDDKEWYVGKAQKK---S 292
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---P 315
++ K ++ S + ++ D ++V NLD + DE L+ELFS YG + K+ P
Sbjct: 293 EREHELKIKFEQS-MKEAADKYQGANLYVKNLDDSIADEKLKELFSSYGTITSCKVMRDP 351
Query: 316 AG--KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
G + GFV F+ A AL +NG + + + ++ + +++A+
Sbjct: 352 NGVSRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVTLAQRKEDRRAR 400
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 27/266 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + ++ L F G+VV+V+V R+ T + GYG++ + + A R L
Sbjct: 35 SLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDV 94
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ N + R+ ++ ++ + IF+ +L + L +TF + + +
Sbjct: 95 LNFTPLNN--RPIRIMYSHRDPSIRK--SGQGNIFIKNLDKAIDHKALHDTF-SSFGNIL 149
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KV +D +G++KGYGFV+F E +A+ ++NG+ + + + +GP K+
Sbjct: 150 SCKVAVDG-SGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQ------- 201
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPAGK- 318
+ + D VFV NL TD+ L++ F ++G + V ++ GK
Sbjct: 202 ---------ERESTGDRAKFNNVFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGDGKS 252
Query: 319 RC-GFVQFADRSCAEEALRMLNGTQL 343
+C GFV F A A+ LNG ++
Sbjct: 253 KCFGFVNFESTDDAARAVEALNGKKI 278
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGKRC---GFVQFADRSCAEEALR 336
T+++VG+LD VTD L +LF+Q GQ+V V++ +R G+V +++ A AL
Sbjct: 34 TSLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALD 93
Query: 337 MLNGTQLGGQNIRLSWG-RSPSNKQA 361
+LN T L + IR+ + R PS +++
Sbjct: 94 VLNFTPLNNRPIRIMYSHRDPSIRKS 119
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 137/290 (47%), Gaps = 36/290 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVVKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--- 314
+ + N V++ N + DE L+ELF +YG+ + VK+
Sbjct: 180 EAELGAKAKEFTN--------------VYIKNFGDDMDDERLKELFDKYGKTLSVKVMMD 225
Query: 315 PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
P GK GFV + A +A+ +NGT+L G+ + + + + +QA+
Sbjct: 226 PTGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAE 275
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 137/290 (47%), Gaps = 24/290 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 144 NGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
NG + N + F + A GA K +++ + D+ D L+E F
Sbjct: 159 NGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKELF-D 212
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+Y T KV++D TG+++G+GFV + + +A+ +MNG + + + +G A K
Sbjct: 213 KYGKTLSVKVMMDP-TGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNE 271
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 316
+ + + ++++ +++ NLD + DE LR+ FS +G + K+
Sbjct: 272 RQAELKRKFEMLKQERISRYQ----GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 327
Query: 317 ----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 328 EEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL D+T+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVVKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F G+ ++VKV+ + TG+ G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDP-TGKSRGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NGT + NG+ F G +K+++ +++ +
Sbjct: 248 VEDMNGTEL-NGKTVF------VGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKK 255
++P+ + A K+
Sbjct: 358 VGSKPLYVALAQRKE 372
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 134/278 (48%), Gaps = 27/278 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL+ + E +L F+ G V +++V R+ T GY ++ F + +
Sbjct: 39 SLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIDQ 98
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ + R+ W+ ++ + + IF+ +L D+ + L +TF +
Sbjct: 99 LNYTPIKG--RLCRIMWSQRDPSLRKKGSGN--IFIKNLHPDIDNKALYDTFSV-FGDIL 153
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
+K+ D G++KG+GFV F +E A+ +NG+ + + + + P ++K Q +
Sbjct: 154 SSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLE 212
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG----- 317
KA Y T ++V N++S TDE +E+F+Q+G +V +
Sbjct: 213 ETKAHY--------------TNLYVKNINSETTDEKFQEMFAQFGPIVSASLEKDADGKL 258
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
K GFV + + A +A+ LN + L G+ +L GR+
Sbjct: 259 KGFGFVNYENHEDAVKAVEALNESDLNGE--KLYVGRA 294
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 141/293 (48%), Gaps = 26/293 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G++++ K+ + + G+ +G+GF+ F A+ +
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDA 185
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT------IFVGDLAADVTDYMLQETFRA 196
NG + NG++ + A + ++RD + T ++V ++ ++ TD QE F A
Sbjct: 186 LNGMLL-NGQEIY---VAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEKFQEMF-A 240
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA--TNK 254
++ A + D G+ KG+GFV + + + ++A+ +N + + +G A N+
Sbjct: 241 QFGPIVSASLEKD-ADGKLKGFGFVNYENHEDAVKAVEALNESDLNGEKLYVGRAQKKNE 299
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
+ ++QY +Y+ ++A+ +FV NLD V DE L E F+ YG + K+
Sbjct: 300 RMHVLKKQYE--AYRLEKMAKY----QGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKV 353
Query: 315 P-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ N + G+ + ++ + +++Q
Sbjct: 354 MRSENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQ 406
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 160 ASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
A+ G+ + + +++VGDL V++ L + F + S +V D +T + GY
Sbjct: 24 AATGSESQSVENSSASLYVGDLEPTVSEAHLYDIF-SPIGSVSSIRVCRDAITKTSLGYA 82
Query: 220 FVRFGDESEQLRAMTEMN-----GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVA 274
+V F D +A+ ++N G C + P+ KK SG
Sbjct: 83 YVNFNDHEAGRKAIDQLNYTPIKGRLCRIMWSQRDPSLRKKG-SG--------------- 126
Query: 275 QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRS 329
+F+ NL + ++ L + FS +G ++ KI K GFV F +
Sbjct: 127 ---------NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEG 177
Query: 330 CAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
A+EA+ LNG L GQ I ++ S + +Q
Sbjct: 178 AAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQ 210
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 131/271 (48%), Gaps = 25/271 (9%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ +L++G+L + E+ L F+ G V +++V R+ T + GYG++ F S+A ER L
Sbjct: 51 LASLYVGELDPTVTESDLYEFFSPIGSVNSIRVCRDAVTKRSLGYGYVNFHSQAAGERAL 110
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
+ N + RL W+ +R + + IF+ +L + + L +TF + +
Sbjct: 111 EELNYAEIKG--VRCRLMWSQRDPSLRRSGSGN--IFIKNLDPAIENKTLHDTF-SSFGK 165
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
KV D G +KG+GFV + + A+ +NG+ + R + +GP KK +
Sbjct: 166 VLSCKVATDE-NGNSKGFGFVHYESDEAAQAAIENINGMLLNGREIYVGPHLAKKDRESR 224
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL--VHVKIPA-- 316
Q +Y T VFV N D+ T++ LRELF YG + +H+++ +
Sbjct: 225 FQEMIKNY--------------TNVFVKNFDTESTEDELRELFESYGPITSIHLQVDSEG 270
Query: 317 -GKRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
K GFV FA+ A +A+ LN + G+
Sbjct: 271 HNKGFGFVNFAEHDDAVKAVEALNDKEYKGK 301
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 19/265 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L ++ L+ F+ G+V++ KV + + G +G+GF+ + S A+ ++
Sbjct: 141 NIFIKNLDPAIENKTLHDTFSSFGKVLSCKVATD-ENGNSKGFGFVHYESDEAAQAAIEN 199
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHT-IFVGDLAADVTDYMLQETFRARYP 199
NG + NG + + + E R + ++T +FV + + T+ L+E F + P
Sbjct: 200 INGMLL-NGREIYVGPHLAKKDRESRFQEMIKNYTNVFVKNFDTESTEDELRELFESYGP 258
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA--TNKKTV 257
T + +D G KG+GFV F + + ++A+ +N +P+ +G A N++
Sbjct: 259 IT-SIHLQVDS-EGHNKGFGFVNFAEHDDAVKAVEALNDKEYKGKPLYVGRAQKKNERVH 316
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--- 314
++Y + Q QS +F+ NLD + D L E F +G + K+
Sbjct: 317 ELTKKYEADRLEKLQKYQS------VNLFIKNLDESIDDARLEEEFKPFGTITSAKVMLD 370
Query: 315 PAGKRCGFVQFADRSCAEEALRMLN 339
GK GF F S EEA + ++
Sbjct: 371 ENGKSRGF-GFVCLSTPEEATKAIS 394
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VG+L VT+ L E F + S +V D +T R+ GYG+V F ++ RA+
Sbjct: 53 SLYVGELDPTVTESDLYEFF-SPIGSVNSIRVCRDAVTKRSLGYGYVNFHSQAAGERALE 111
Query: 235 EMN-----GVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGN 289
E+N GV C + P+ +++ SG +F+ N
Sbjct: 112 ELNYAEIKGVRCRLMWSQRDPSL-RRSGSG------------------------NIFIKN 146
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQLG 344
LD + ++ L + FS +G+++ K+ K GFV + A+ A+ +NG L
Sbjct: 147 LDPAIENKTLHDTFSSFGKVLSCKVATDENGNSKGFGFVHYESDEAAQAAIENINGMLLN 206
Query: 345 GQNI 348
G+ I
Sbjct: 207 GREI 210
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ + E L F G + ++ + + + G +G+GF+ F A + ++
Sbjct: 234 NVFVKNFDTESTEDELRELFESYGPITSIHLQVDSE-GHNKGFGFVNFAEHDDAVKAVEA 292
Query: 143 FN-----GTPMPNG---EQNFRLNWAS--FGAG--EKRDDTPDHTIFVGDLAADVTDYML 190
N G P+ G ++N R++ + + A EK +F+ +L + D L
Sbjct: 293 LNDKEYKGKPLYVGRAQKKNERVHELTKKYEADRLEKLQKYQSVNLFIKNLDESIDDARL 352
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+E F+ + + AKV++D G+++G+GFV E +A++EMN + +P+ +
Sbjct: 353 EEEFKP-FGTITSAKVMLDE-NGKSRGFGFVCLSTPEEATKAISEMNQRMVANKPLYVAL 410
Query: 251 A 251
A
Sbjct: 411 A 411
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRC---GFVQFADRSCAEEALRM 337
+++VG LD VT+ L E FS G + +++ KR G+V F ++ E AL
Sbjct: 53 SLYVGELDPTVTESDLYEFFSPIGSVNSIRVCRDAVTKRSLGYGYVNFHSQAAGERALEE 112
Query: 338 LNGTQLGGQNIRLSWG-RSPSNKQA 361
LN ++ G RL W R PS +++
Sbjct: 113 LNYAEIKGVRCRLMWSQRDPSLRRS 137
>gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 132/274 (48%), Gaps = 5/274 (1%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F G + K+I + T + Y F+EF A + N
Sbjct: 1 YVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIAAMN 58
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G + E ++NWA+ +K+D + +FVGDL+ ++T ++ F +
Sbjct: 59 GRKILGKE--VKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAF-GPFGKISDC 115
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYP 264
+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K +
Sbjct: 116 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNETT 175
Query: 265 KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 324
+ + P+N TV+ G + + +T++ +R+ FS +G ++ +++ K FV+
Sbjct: 176 NTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPDKGYSFVR 235
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
F A A+ +NGT + G ++ WG+ ++
Sbjct: 236 FNSHEAAAHAIVSVNGTTIEGYVVKCYWGKETTD 269
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + F G++ +V+++ TG+ +GYGF+ F
Sbjct: 75 PTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSF 134
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDDTP 172
++ AE +Q G + G + R NWA SF +
Sbjct: 135 FNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPS 192
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G + +T+ ++++TF + + +V D KGY FVRF A
Sbjct: 193 NCTVYCGGVTTGLTEQIMRQTF-SPFGHIMEIRVFPD------KGYSFVRFNSHEAAAHA 245
Query: 233 MTEMNG 238
+ +NG
Sbjct: 246 IVSVNG 251
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAEEALRMLNG 340
+VGNL VT+ + ELF Q G K+ AG C FV+F + A + +NG
Sbjct: 1 YVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYC-FVEFYEHRHATATIAAMNG 59
Query: 341 TQLGGQNIRLSWGRSPSNKQ 360
++ G+ ++++W +P++++
Sbjct: 60 RKILGKEVKVNWATTPTSQK 79
>gi|448097114|ref|XP_004198591.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359380013|emb|CCE82254.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 125/247 (50%), Gaps = 45/247 (18%)
Query: 42 MMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTC 101
M + P+P P + + AAA + G P Q P RTLW+GDL W+DET +
Sbjct: 93 MSVLPEP---PLSTKESSAAATKQQG---PLGHQENP---RTLWMGDLDPWLDETAIADL 143
Query: 102 FAHT-GEVVAVKVIRNKQTG--------QIEGYGFIEFISRAGAERVLQTFNGTPMP--- 149
+ + + V VK+IR + GY F+EF + A+ L + NG P+P
Sbjct: 144 WYNVLKKRVNVKLIRPRSHKTDFPYHGVSHLGYCFVEFDNLYDAQLAL-SLNGKPLPQSA 202
Query: 150 ------------NGEQNFRLNWASFGAGEKRD----DTPDHTIFVGDLAADVTDYMLQET 193
N ++ FRLNWA+ G D TP+ ++FVGDL+A T+ L
Sbjct: 203 MPSQKVRSRNQDNQKKYFRLNWAN---GATLDAPIIHTPEFSLFVGDLSASTTEAHLLAF 259
Query: 194 FRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA- 251
F+ +YP S K +V+ D ++G+++ +GFVRF DE + +A+ EM G + R +R+ A
Sbjct: 260 FQNKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKALVEMQGTWFGGRQLRVALAS 319
Query: 252 --TNKKT 256
TN KT
Sbjct: 320 AKTNAKT 326
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 54/82 (65%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DP NTTVFVG L + V D+ L LF +G + VKIP GK CGF++++ R AE+A+ +
Sbjct: 420 DPKNTTVFVGGLSAEVNDQTLFALFKPFGIIQQVKIPPGKNCGFIKYSKRQEAEDAIASM 479
Query: 339 NGTQLGGQNIRLSWGRSPSNKQ 360
G +GG +RLSWG+ +N +
Sbjct: 480 QGFIIGGNRVRLSWGKVSTNNK 501
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 284 TVFVGNLDSIVTDEHLRELF-SQYGQLVHVK------IPAGKRC-GFVQFADRSCAEEAL 335
++FVG+L + T+ HL F ++Y + V + RC GFV+F+D +AL
Sbjct: 241 SLFVGDLSASTTEAHLLAFFQNKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKAL 300
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQA 361
+ GT GG+ +R++ + +N +
Sbjct: 301 VEMQGTWFGGRQLRVALASAKTNAKT 326
>gi|328715704|ref|XP_001946343.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1
[Acyrthosiphon pisum]
Length = 419
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 4/205 (1%)
Query: 151 GEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVID 209
G + +LNW S G K D + H IFVGDL+ ++ L+E F A + +VV D
Sbjct: 71 GLKEMKLNWVSSPGPQLKADTSKHHHIFVGDLSPEIETQTLREAF-APFGEISDCRVVRD 129
Query: 210 RLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQ 269
T ++KGYGFV F ++E A+ MNG + +R +R AT K K
Sbjct: 130 PQTLKSKGYGFVSFLKKAEAESAIAAMNGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTF 189
Query: 270 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRS 329
+ QS P N TV+ G L S +TDE +++ F+ +G + +++ K FV+FA +
Sbjct: 190 DEVYNQSS--PTNCTVYCGGLTSGLTDELVQKTFAPFGNIQEIRVFKDKGYAFVRFATKE 247
Query: 330 CAEEALRMLNGTQLGGQNIRLSWGR 354
A A+ ++ + + GQ ++ SWG+
Sbjct: 248 SATHAIVAVHNSDINGQPVKCSWGK 272
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 25/193 (12%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
PQ + + +++GDL ++ L FA GE+ +V+R+ QT + +GYGF+ F+
Sbjct: 85 PQLKADTSKHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFL 144
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWA----------------SFGAGEKRDDTPDHT 175
+A AE + NG + G ++ R NWA +F + + T
Sbjct: 145 KKAEAESAIAAMNGQWL--GSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQSSPTNCT 202
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
++ G L + +TD ++Q+TF A + + + +V D KGY FVRF + A+
Sbjct: 203 VYCGGLTSGLTDELVQKTF-APFGNIQEIRVFKD------KGYAFVRFATKESATHAIVA 255
Query: 236 MNGVFCSTRPMRI 248
++ + +P++
Sbjct: 256 VHNSDINGQPVKC 268
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L++LFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++GG+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEIGGKVIFVGRAQKKVERQAE 275
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 139/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L++ F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKDLF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEIGGKVIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 140/287 (48%), Gaps = 27/287 (9%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ +L++GDL + ++ L F G+VV+V+V R+ + + GYG++ + + A R L
Sbjct: 26 VTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARAL 85
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
+ N TP+ + R+ +++ +R + + IF+ +L + L +TF A + +
Sbjct: 86 EVLNFTPLHG--KPIRIMYSNRDPTIRR--SGNGNIFIKNLDKAIDHKALHDTFSA-FGN 140
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
KV +D +G++KGYGFV++ E +A+ ++NG+ + + + +GP K
Sbjct: 141 ILSCKVAVDS-SGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGPFVRKH----- 194
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PA 316
+ + D T VFV NL +E LR++F ++G + V +
Sbjct: 195 -----------ERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDEDG 243
Query: 317 GKRC-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
RC GFV F + A A+ LNG +L ++ + + S ++ +
Sbjct: 244 KSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKKSEREME 290
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 160/338 (47%), Gaps = 30/338 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + +GQ +GYGF+++ S A++ ++
Sbjct: 116 NIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDS-SGQSKGYGFVQYDSEEAAQKAIEK 174
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFR---ARYP 199
NG + N +Q + F +RD D T F ++++ L+E R +
Sbjct: 175 LNGMLL-NDKQVY---VGPFVRKHERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFG 230
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
+ V+ D G+++ +GFV F + + RA+ +NG + +G A K S
Sbjct: 231 AITSVAVMKDE-DGKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKK---SE 286
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PA 316
++ K ++ S ++ D +++ NLD ++DE L+ELFS YG + K+ P+
Sbjct: 287 REMELKHRFEQS-AKEAVDKSQGLNLYIKNLDDSISDEKLKELFSPYGTITSCKVMRDPS 345
Query: 317 G--KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 374
G K GFV F++ A AL +NG + + + ++ + ++A+
Sbjct: 346 GVSKGSGFVAFSNPEEASRALSEMNGKMVVSKPLYVALAQRKEERRARLQAQ-------- 397
Query: 375 YAQGYENYGYAAAAPQDPSMYYGGYPGYGN---YQQPQ 409
++Q ++ AP+ P MY G PG G Y QPQ
Sbjct: 398 FSQMRPIAMASSVAPRMP-MYPPGGPGLGQQIFYGQPQ 434
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 146/285 (51%), Gaps = 27/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + + L F+ G VV+V+V R+ + + GY ++ + ++ A R L+
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG+ R+ +++ ++ T + IF+ +L + + L +TF A + +
Sbjct: 96 LNFTPI-NGKP-IRIMYSNRDPSSRKSGTGN--IFIKNLDKSIDNKALYDTFCA-FGNIL 150
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
K+ D +G ++GYGFV+F + A+ ++NG+ + + + +GP K
Sbjct: 151 SCKIATDP-SGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRK-------- 201
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPAGK- 318
Q+ + S+ +N V+V NL VTD+ L+E+F +YG + V ++ GK
Sbjct: 202 ------QDRENVSSNIKFSN--VYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKS 253
Query: 319 RC-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
RC GFV F + A +A++ LNG + + + + S ++ +
Sbjct: 254 RCFGFVNFENADAAAQAVQELNGKIFNDKELYVGRAQKKSEREME 298
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 142/289 (49%), Gaps = 20/289 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F G +++ K+ + +G+ GYGF++F A+ +
Sbjct: 124 NIFIKNLDKSIDNKALYDTFCAFGNILSCKIATDP-SGESRGYGFVQFEKDESAQSAIDK 182
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARY 198
NG + N ++ F F + R++ + ++V +L+ VTD L+E F +Y
Sbjct: 183 LNGM-LINDKKVF---VGPFVRKQDRENVSSNIKFSNVYVKNLSDTVTDDELKEMF-GKY 237
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ A V+ D G+++ +GFV F + +A+ E+NG + + + +G A K S
Sbjct: 238 GTITSAVVMRDS-DGKSRCFGFVNFENADAAAQAVQELNGKIFNDKELYVGRAQKK---S 293
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP--- 315
++ K ++ + V + + NT +++ NL+ + DE LRELF++YG + K+
Sbjct: 294 EREMELKEKFEKN-VQEVAEKFQNTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDS 352
Query: 316 --AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ GFV F A AL +NG +G + + ++ + +++A+
Sbjct: 353 NGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVALAQRKEDRKAK 401
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 146/285 (51%), Gaps = 27/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + + L F+ G VV+V+V R+ + + GY ++ + ++ A R L+
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG+ R+ +++ ++ T + IF+ +L + + L +TF A + +
Sbjct: 96 LNFTPI-NGKP-IRIMYSNRDPSSRKSGTGN--IFIKNLDKSIDNKALYDTFCA-FGNIL 150
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
K+ D +G ++GYGFV+F + A+ ++NG+ + + + +GP K
Sbjct: 151 SCKIATDP-SGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRK-------- 201
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPAGK- 318
Q+ + S+ +N V+V NL VTD+ L+E+F +YG + V ++ GK
Sbjct: 202 ------QDRENVSSNIKFSN--VYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKS 253
Query: 319 RC-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
RC GFV F + A +A++ LNG + + + + S ++ +
Sbjct: 254 RCFGFVNFENADAAAQAVQELNGKIFNDKELYVGRAQKKSEREME 298
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 142/289 (49%), Gaps = 20/289 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F G +++ K+ + +G+ GYGF++F A+ +
Sbjct: 124 NIFIKNLDKSIDNKALYDTFCAFGNILSCKIATDP-SGESRGYGFVQFEKDESAQSAIDK 182
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARY 198
NG + N ++ F F + R++ + ++V +L+ VTD L+E F +Y
Sbjct: 183 LNGM-LINDKKVF---VGPFVRKQDRENVSSNIKFSNVYVKNLSDTVTDDELKEMF-GKY 237
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ A V+ D G+++ +GFV F + +A+ E+NG + + + +G A K S
Sbjct: 238 GTITSAVVMRDS-DGKSRCFGFVNFENADAAAQAVQELNGKIFNDKELYVGRAQKK---S 293
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP--- 315
++ K ++ + V + + NT +++ NL+ + DE LRELF++YG + K+
Sbjct: 294 EREMELKEKFEKN-VQEVAEKFQNTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDS 352
Query: 316 --AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ GFV F A AL +NG +G + + ++ + +++A+
Sbjct: 353 NGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVALAQRKEDRKAK 401
>gi|260943169|ref|XP_002615883.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
gi|238851173|gb|EEQ40637.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
Length = 385
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 107/193 (55%), Gaps = 10/193 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+ L++G L ++E LN F+ +G V +VK++ N + Q Y F+EF+ AGA LQ
Sbjct: 44 KVLYVGGLPKSINEDALNEKFSASGPVFSVKIL-NDKNKQGFNYAFVEFVDEAGAAAALQ 102
Query: 142 TFNGTPMPNG--EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
FNG+ N + N+ ++F A + DD P + IFVGDL+ +V D L + F A +
Sbjct: 103 EFNGSSFENSMLKINYAYQSSTFNATQNSDD-PTYNIFVGDLSPEVDDESLHKFFSA-FE 160
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
S K A V+ D T R++GYGFV F + ++ A++ MNG + R +R A++K
Sbjct: 161 SLKQAHVMWDMQTSRSRGYGFVTFANLADAETALSTMNGKVLNGRAIRCNWASHK----- 215
Query: 260 QQQYPKASYQNSQ 272
QQ A QN+Q
Sbjct: 216 QQNSRGAPRQNNQ 228
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 81/185 (43%), Gaps = 23/185 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++VG L + + L E F A P K++ D+ + Y FV F DE+ A+
Sbjct: 45 VLYVGGLPKSINEDALNEKFSASGP-VFSVKILNDK-NKQGFNYAFVEFVDEAGAAAALQ 102
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
E NG ++I A T + Q+ DDP +FVG+L V
Sbjct: 103 EFNGSSFENSMLKINYAYQSSTFNA--------------TQNSDDPT-YNIFVGDLSPEV 147
Query: 295 TDEHLRELFSQYGQL--VHV----KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
DE L + FS + L HV + + GFV FA+ + AE AL +NG L G+ I
Sbjct: 148 DDESLHKFFSAFESLKQAHVMWDMQTSRSRGYGFVTFANLADAETALSTMNGKVLNGRAI 207
Query: 349 RLSWG 353
R +W
Sbjct: 208 RCNWA 212
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ 342
TTV++GN+ L L +G +V K K C FV++ A A+ L+G
Sbjct: 300 TTVYLGNIAHFTQQNDLIPLLQNFGYIVDFKFHPEKGCAFVKYDTHERAALAIVQLSGFN 359
Query: 343 LGGQNIRLSWGRS 355
+ G+ ++ WG+S
Sbjct: 360 VNGRQLKCGWGKS 372
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 22/96 (22%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++GDL +D+ L+ F+ + V+ + QT + GYGF+ F + A AE L T
Sbjct: 137 NIFVGDLSPEVDDESLHKFFSAFESLKQAHVMWDMQTSRSRGYGFVTFANLADAETALST 196
Query: 143 FNG----------------------TPMPNGEQNFR 156
NG P N ++ FR
Sbjct: 197 MNGKVLNGRAIRCNWASHKQQNSRGAPRQNNQRQFR 232
>gi|405975383|gb|EKC39949.1| tRNA selenocysteine 1-associated protein 1 [Crassostrea gigas]
Length = 337
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 134/255 (52%), Gaps = 44/255 (17%)
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDL 181
GY FI+F A + + NG +PN + F+LN AS+G ++ TP++++FVGDL
Sbjct: 16 GYCFIDFHDPENAHQAMLKLNGKNIPNSSPTRRFKLNSASYG--KEHLSTPEYSLFVGDL 73
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE---MNG 238
+V DY L + F R+ S + AKVV++ +G++KGYGFVRF +E++Q RA+ E M G
Sbjct: 74 TEEVDDYTLYQAFSRRFKSCRSAKVVLEP-SGKSKGYGFVRFTEETDQQRALIEMQHMQG 132
Query: 239 VFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 298
V +P+R+ AT K P+ S +FVG+L V D
Sbjct: 133 V--GKKPIRVSLATPKS--------PEYS-----------------LFVGDLTEEVDDYT 165
Query: 299 LRELFS-QYGQLVHVKI---PAGKR--CGFVQFADRSCAEEALRMLNGTQ-LGGQNIRLS 351
L + FS ++ K+ P+GK GFV+F + + + AL + Q +G + IR+S
Sbjct: 166 LYQAFSRRFKSCRSAKVVLEPSGKSKGYGFVRFTEETDQQRALIEMQHMQGVGKKPIRVS 225
Query: 352 WGRSPSNKQAQPDPN 366
+P AQ DPN
Sbjct: 226 LA-TPKRPMAQ-DPN 238
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 100/179 (55%), Gaps = 20/179 (11%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL-- 140
+L++GDL +D+ L F+ + + + +G+ +GYGF+ F +R L
Sbjct: 67 SLFVGDLTEEVDDYTLYQAFSRRFKSCRSAKVVLEPSGKSKGYGFVRFTEETDQQRALIE 126
Query: 141 -QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
Q G G++ R++ A+ +P++++FVGDL +V DY L + F R+
Sbjct: 127 MQHMQGV----GKKPIRVSLAT-------PKSPEYSLFVGDLTEEVDDYTLYQAFSRRFK 175
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE---MNGVFCSTRPMRIGPATNKK 255
S + AKVV++ +G++KGYGFVRF +E++Q RA+ E M GV +P+R+ AT K+
Sbjct: 176 SCRSAKVVLEP-SGKSKGYGFVRFTEETDQQRALIEMQHMQGV--GKKPIRVSLATPKR 231
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 134/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L+ ++E L F G V +++V R+ T + GY ++ F++ +ER L+
Sbjct: 81 SLYVGELEPNVNEAILFEIFNMVGAVSSIRVCRDTVTRRSLGYAYVNFLNAEDSERALEQ 140
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ + R+ W+ G++R + IF+ +L + + L +TF A +
Sbjct: 141 LNYTPIRG--RPCRIMWSQRDPGQRRAGQGN--IFIKNLDEAIDNKALHDTF-AAFGKIL 195
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KV + + GYGFV + A+ +NG+ + + + +G +KK + +
Sbjct: 196 SCKVASNEHG--SLGYGFVHYESNDAAEAAIKHVNGMLLNDKKVYVGHHISKKDRQAKIE 253
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----G 317
+A Y N V+V NLD VT E +LF +YG++ I
Sbjct: 254 EARAHYTN--------------VYVKNLDPAVTQEEFEKLFEKYGKITSAAIATDQEGKS 299
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ GFV F++ A +A+ LN T+ GQ + L + S ++ +
Sbjct: 300 RGFGFVNFSEHEQAAKAVEELNDTEFHGQKLFLGRAQKKSEREEE 344
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 18/191 (9%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++ +L + + F G++ + I Q G+ G+GF+ F A + ++
Sbjct: 262 VYVKNLDPAVTQEEFEKLFEKYGKITSA-AIATDQEGKSRGFGFVNFSEHEQAAKAVEEL 320
Query: 144 NGTPM-------------PNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYML 190
N T E+ R + + EK +++ +L D D L
Sbjct: 321 NDTEFHGQKLFLGRAQKKSEREEELRRAYEA-AKNEKLSKYQGVNLYIKNLPEDFDDERL 379
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
QE F A + +T AKV + TG ++G+GFV + E +A+ EMNG RP+ +
Sbjct: 380 QEEF-APFGTTTSAKV-MRTPTGASRGFGFVCYSAPEEANKAVAEMNGKMIENRPLYVAL 437
Query: 251 ATNKKTVSGQQ 261
A +K V QQ
Sbjct: 438 A-QRKDVRHQQ 447
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 27/294 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGN---DPYAFIEYSNYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRVFL--EKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 --KTVSGQQQYPKASYQNSQVAQSD-----------DDPNNTTVFVGNLD-SIVTDEHLR 300
K N +S+ P NTTV+ G ++++D+ +
Sbjct: 181 STKAGGQGGGMGGGGPGNGTGIKSNQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMH 240
Query: 301 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
+ F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 KHFMQFGPIQDVRVFKEKGFAFIKFVTKEAAARAIEHTHISEVHGSQVKCFWGK 294
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 49/255 (19%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D++ T++VG+L V++ +L F P K K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDGSVSEDLLIALFGKMGP-VKSCKII--REPGNDP-YAFIEYSNYQA 57
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+T MN + +++ N T G Q PK D ++ +FVG
Sbjct: 58 ATTALTAMNKRVFLEKEIKV----NWATSPGNQ--PKT-----------DISSHHHIFVG 100
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L + E LRE F+ +G++ + +I K FV F ++ AE A++ +NG
Sbjct: 101 DLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQW 160
Query: 343 LGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYA-----------------QGYENYGYA 385
+G ++IR +W S ++ P AG G +E Y
Sbjct: 161 IGSRSIRTNW----STRKLPPPRESTKAGGQGGGMGGGGPGNGTGIKSNQRHTFEEV-YN 215
Query: 386 AAAPQDPSMYYGGYP 400
++P + ++Y GG+P
Sbjct: 216 QSSPTNTTVYCGGFP 230
>gi|383852956|ref|XP_003701991.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Megachile rotundata]
Length = 295
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 101/182 (55%), Gaps = 13/182 (7%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGA 136
P + LW+G L+ +M E+++ F GE VKV+RN+ TG+ GY F+ F + A
Sbjct: 4 PMVLCQLWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMA 63
Query: 137 ERVLQTFNGTPMP--NGEQNFRLNWASFG---AGEKRDDTPDHTIFVGDLAADVTDYMLQ 191
+ NG +P N FRLN AS A E+ + +I+VGDL+ DV DY L
Sbjct: 64 LDAMHKLNGKVIPGSNPAVRFRLNHASTTGKPAAER-----EFSIWVGDLSTDVDDYSLY 118
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGP 250
F A+Y S + AKV++D +G +KGYGFVRF +E EQ ++ MNG T+ ++I
Sbjct: 119 RAFAAKYNSIRTAKVILDS-SGFSKGYGFVRFANEEEQKNSLVTMNGYRGLGTKSLKICN 177
Query: 251 AT 252
A
Sbjct: 178 AV 179
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAE 275
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|340728040|ref|XP_003402340.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Bombus
terrestris]
gi|350417670|ref|XP_003491536.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Bombus
impatiens]
Length = 295
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 7/179 (3%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGA 136
P + LW+G L+ +M E+++ F GE VKV+RN+ TG+ GY F+ F + A
Sbjct: 4 PMVLCQLWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMA 63
Query: 137 ERVLQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG +P N FRLN AS K + +I+VGDL+ DV DY L F
Sbjct: 64 LDAMHKLNGKVIPGSNPAVRFRLNHASTTG--KPTTEREFSIWVGDLSTDVDDYSLYRAF 121
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPAT 252
A+Y S + AKV++D +G +KGYGFVRF +E EQ ++ MNG T+ ++I A
Sbjct: 122 AAKYNSIRTAKVILDS-SGFSKGYGFVRFANEEEQKNSLVTMNGYRGLGTKSLKICNAV 179
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAE 275
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAE 275
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|449440159|ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
gi|449521207|ref|XP_004167621.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
Length = 640
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 139/283 (49%), Gaps = 27/283 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + + L F+ + +V++ R+ TG+ YG++ FIS A ++
Sbjct: 15 SLYVGDLHPDVTDGQLFDAFSGFKSLASVRICRDSSTGRSLSYGYVNFISPQDATNAIEV 74
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + M NG + R+ W+ A ++ + +FV +L+ + LQE F+ ++ +
Sbjct: 75 MNHS-MLNG-RAIRVMWSRRDADARKSGIGN--VFVKNLSDSINSLGLQELFK-KFGNVL 129
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
+KV G++KGYGFV+F E A+ +NG TV +Q
Sbjct: 130 SSKVATSD-DGKSKGYGFVQFESEESANAAIESLNGF----------------TVGDKQI 172
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AG 317
Y + S ++ D T ++V NLD + +EHL+E FS++G++ + I
Sbjct: 173 YVGKFVRKSDRVLANPDIKYTNLYVKNLDPEIGEEHLQEKFSEFGKISSMIISRDENGVS 232
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
+ GF+ F + A+ AL LNG+QLG + I ++ + + ++
Sbjct: 233 RGFGFINFENSDDAKRALETLNGSQLGSKVIYIARAQKKTERE 275
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 147/322 (45%), Gaps = 41/322 (12%)
Query: 54 AMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKV 113
MW+ + A + +G+ +++ +L ++ L F G V++ KV
Sbjct: 87 VMWSRRDADARKSGIG-------------NVFVKNLSDSINSLGLQELFKKFGNVLSSKV 133
Query: 114 IRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD--- 170
G+ +GYGF++F S A +++ NG + G++ + G ++ D
Sbjct: 134 A-TSDDGKSKGYGFVQFESEESANAAIESLNGFTV--GDKQIYV-----GKFVRKSDRVL 185
Query: 171 -TPD---HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR-LTGRTKGYGFVRFGD 225
PD ++V +L ++ + LQE F K + ++I R G ++G+GF+ F +
Sbjct: 186 ANPDIKYTNLYVKNLDPEIGEEHLQEKFS---EFGKISSMIISRDENGVSRGFGFINFEN 242
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTV 285
+ RA+ +NG ++ + I A K + +++ + Y+ + + + V
Sbjct: 243 SDDAKRALETLNGSQLGSKVIYIARAQKK---TEREEVLRRHYE-EKCKEQVLKYKGSNV 298
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNG 340
+V N+D VTDE LRE FSQ+G + K+ K GFV F++ A+ A+ L G
Sbjct: 299 YVKNIDDDVTDEELRERFSQFGTITSSKLMRDDKGINKGFGFVCFSNPDEAKRAVNTLQG 358
Query: 341 TQLGGQNIRLSWGRSPSNKQAQ 362
G+ + L+ + ++Q Q
Sbjct: 359 CMFHGKPLYLAIAQRKEDRQMQ 380
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 138/290 (47%), Gaps = 36/290 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--- 314
+ + T V++ N V DE+L+ELFSQ+G+ + VK+
Sbjct: 180 EAELGAKAKEF--------------TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD 225
Query: 315 PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
P+GK GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 226 PSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAE 275
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|149023879|gb|EDL80376.1| rCG31475, isoform CRA_b [Rattus norvegicus]
Length = 656
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 36/290 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-- 315
+ + T V++ N V DE+LRELFSQ+G+ + VK+
Sbjct: 180 EAELGAKAKEF--------------TNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD 225
Query: 316 ---AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV + A +A+ +NG ++ G++I + + +QA+
Sbjct: 226 CSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAE 275
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 139/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A + +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAANKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLRELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A +A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|348517413|ref|XP_003446228.1| PREDICTED: polyadenylate-binding protein 4 [Oreochromis niloticus]
Length = 627
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 137/290 (47%), Gaps = 36/290 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVVKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--- 314
+ + N V++ N + DE L+E+F +YG+ + VK+
Sbjct: 180 EAELGAKAKEFTN--------------VYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTD 225
Query: 315 PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
P+GK GFV + A +A+ +NGT+L G+ + + + +QA+
Sbjct: 226 PSGKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAE 275
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 137/289 (47%), Gaps = 22/289 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 144 NGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG + + + ++ + A GA K +++ + D+ D L+E F +
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKEIF-DK 213
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y T KV+ D +G+++G+GFV + + +A+ EMNG + + + +G A K
Sbjct: 214 YGKTLSVKVMTDP-SGKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMER 272
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA- 316
+ + + ++++ +++ NLD + DE LR+ FS +G + K+
Sbjct: 273 QAELKRKFEQLKQERISRY----QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE 328
Query: 317 ---GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 329 EGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL D+T+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVVKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F G+ ++VKV+ + +G+ G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDP-SGKSRGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NGT + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGTEL-NGKTVF------VGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKK 255
++P+ + A K+
Sbjct: 358 VGSKPLYVALAQRKE 372
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 28/283 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN---DPYAFIEYSNYQAASTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFL--EKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 --KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVH 311
K + Y ++S P NTTV+ G ++++D+ + + F Q+G +
Sbjct: 181 PSKXXXXXEVYNQSS------------PTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQD 228
Query: 312 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 229 VRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 271
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 334
D+ T++VGNLDS V+++ L LFS G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAASTA 61
Query: 335 LRMLNGTQLGGQNIRLSWGRSPSNK 359
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|444721742|gb|ELW62457.1| Polyadenylate-binding protein 4-like protein [Tupaia chinensis]
Length = 370
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 141/285 (49%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V+++++ R+ T + GY ++ F+ A A++ L T
Sbjct: 11 SLYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N M G ++ RL W+ A ++ + +F+ +L + + L E F A +
Sbjct: 71 MN-FDMIKG-KSIRLMWSQRDACLRKSGIGN--VFIKNLDRSIDNKTLYEHFSA-FGKIL 125
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
+KV+ D +KGY FV F ++S RA+ EMNG + +G N+K + +
Sbjct: 126 SSKVMSD--DQGSKGYAFVHFQNQSAADRAIEEMNGKLLKDCKVFVGRFKNRKDREAELR 183
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ + T V++ N + DE LRE+FS+YG+ + VK+ P+GK
Sbjct: 184 NKASEF--------------TNVYIKNFGDDMDDERLREVFSKYGKTLSVKVMTDPSGKS 229
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV F + A++A+ +NG + GQ I + + +QA+
Sbjct: 230 KGFGFVSFDNHEAAQKAVEEMNGKDINGQLIFVGRAQKKVERQAE 274
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 146/307 (47%), Gaps = 33/307 (10%)
Query: 55 MWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI 114
MW+ + A + +G+ ++I +L +D L F+ G++++ KV+
Sbjct: 84 MWSQRDACLRKSGIG-------------NVFIKNLDRSIDNKTLYEHFSAFGKILSSKVM 130
Query: 115 RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNF-RLNWASFGAGEKRDDTPD 173
+ Q + GY F+ F +++ A+R ++ NG + + + R E R+ +
Sbjct: 131 SDDQGSK--GYAFVHFQNQSAADRAIEEMNGKLLKDCKVFVGRFKNRKDREAELRNKASE 188
Query: 174 HT-IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
T +++ + D+ D L+E F ++Y T KV+ D +G++KG+GFV F + +A
Sbjct: 189 FTNVYIKNFGDDMDDERLREVF-SKYGKTLSVKVMTDP-SGKSKGFGFVSFDNHEAAQKA 246
Query: 233 MTEMNGVFCSTRPMRIGPATNK--KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNL 290
+ EMNG + + + +G A K + +Q + + + + Q +++ NL
Sbjct: 247 VEEMNGKDINGQLIFVGRAQKKVERQAELKQMFEQQKRERIRKCQG------VKLYIKNL 300
Query: 291 DSIVTDEHLRELFSQYGQLVHVKIP----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
D + DE LR+ FS +G + VK+ K G + F+ A +A+ +NG LG +
Sbjct: 301 DDTIDDEKLRKEFSSFGSISRVKVMQEEGQSKGFGLICFSSPEEATKAMTEMNGQILGSK 360
Query: 347 --NIRLS 351
NI LS
Sbjct: 361 PLNIALS 367
>gi|328708324|ref|XP_001951465.2| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Acyrthosiphon pisum]
Length = 294
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 89/158 (56%), Gaps = 11/158 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+W+G+++ +M E ++ F GE VK+IRN TG+I GY F++F V+
Sbjct: 123 IWMGNVKPYMTERFITRAFHKMGEYPNNVKLIRNTNTGEISGYAFVDFYDSVS---VMHK 179
Query: 143 FNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG +PN F+LN AG+ + ++++G L V DY L +TF RYPS
Sbjct: 180 LNGKYIPNTNPPVKFKLN----HAGKSTSINREFSVWLGILGPGVDDYQLYKTFACRYPS 235
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
+ AKVV+DR +G +KGYGF+ FG E EQ + MNG
Sbjct: 236 IRTAKVVLDR-SGLSKGYGFIFFGSEEEQKHCLNNMNG 272
>gi|322792679|gb|EFZ16553.1| hypothetical protein SINV_16123 [Solenopsis invicta]
Length = 306
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 103/192 (53%), Gaps = 7/192 (3%)
Query: 65 AAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIE 123
+ G + + P + LW+G L+ +M E+++ F GE VKV+RN+ TG+
Sbjct: 2 SKGNRLTASKMSGPMVLCQLWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPA 61
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDL 181
GY F+ F + A + NG +P N FRLN AS K + +I+VGDL
Sbjct: 62 GYCFVHFPTDEMALDAMHKLNGKVIPGSNPPVRFRLNHASTTG--KPTTEREFSIWVGDL 119
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF- 240
+ DV DY L F A+Y S + AKV++D +G +KGYGFVRF +E EQ ++ MNG
Sbjct: 120 STDVDDYSLYRAFAAKYNSIRTAKVILDS-SGFSKGYGFVRFANEEEQKNSLITMNGYRG 178
Query: 241 CSTRPMRIGPAT 252
T+ ++I A
Sbjct: 179 LGTKSLKICNAV 190
>gi|449488383|ref|XP_002188190.2| PREDICTED: nucleolysin TIA-1-like, partial [Taeniopygia guttata]
Length = 537
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 156/330 (47%), Gaps = 26/330 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFSEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQ 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---- 177
Query: 262 QYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVT--DEHLRELFSQYGQLVHVKIPAGKR 319
PK+++++ S P+ + S++ ++ +R+ FS +GQ++ +++ K
Sbjct: 178 --PKSTFESRSGPLSPRVPDEA------VQSVLPAPEQLMRQTFSPFGQIMEIRVFPDKG 229
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGY 379
FV+F+ A A+ +NGT + G ++ WG+ ++ A P P G Y Y
Sbjct: 230 YSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETAD-MAGPVPQ----GQLSYPPAY 284
Query: 380 ENYGYAAAAPQDPSMYYGGY--PGYGNYQQ 407
+G Q G+ P YG Y Q
Sbjct: 285 GQWGQWYGGAQLGQYVPNGWQVPAYGVYGQ 314
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 28/190 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 3 DEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFSEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVG 288
A+ MNG + + G++ K ++ + +Q D N+ VFVG
Sbjct: 59 AAAALAAMNG----------------RKIMGKEV--KVNWATTPSSQKKDTSNHFHVFVG 100
Query: 289 NLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQ 342
+L +T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G
Sbjct: 101 DLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 160
Query: 343 LGGQNIRLSW 352
LGG+ IR +W
Sbjct: 161 LGGRQIRTNW 170
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 332
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F++ A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFSEHRHAA 60
Query: 333 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|320591142|gb|EFX03581.1| polyadenylate-binding protein [Grosmannia clavigera kw1407]
Length = 780
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 26/285 (9%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P P +L++G+L + E L F+ G V +++V R+ T + GY ++
Sbjct: 47 TPSSAAAHPQASASLYVGELDESVTEAMLFELFSQIGPVASIRVCRDAVTRRSLGYAYVN 106
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
+ S A E+ L+ N T + N + R+ W+ ++ T IF+ +L A + +
Sbjct: 107 YNSTADGEKALEELNYTLIKN--RPCRIMWSQRDPALRK--TGQGNIFIKNLDAAIDNKA 162
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L +TF A + + KV D G +KGYGFV + + +A+ +NG+ + + + +G
Sbjct: 163 LHDTF-AAFGNILSCKVAQDE-HGNSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVG 220
Query: 250 PATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 309
KK + + KA+Y T +++ NL + VTD+ R+LF QYG +
Sbjct: 221 HHIPKKDRQSKFEEMKANY--------------TNIYIKNLHADVTDDEFRKLFEQYGAV 266
Query: 310 VHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQNI 348
I + GF+ F A +A+ LN ++ GQ +
Sbjct: 267 TSSTIARDQETGKSRGFGFINFTTHESAAKAVEELNSREIHGQEL 311
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 116/242 (47%), Gaps = 26/242 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ FA G +++ KV +++ G +GYGF+ + + A++ ++
Sbjct: 149 IFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEH-GNSKGYGFVHYETDEAAQQAIKHV 207
Query: 144 NGTPMPNGEQNFRLNWASFGAGE---KRDDTPDH--------TIFVGDLAADVTDYMLQE 192
NG LN G K+D I++ +L ADVTD ++
Sbjct: 208 NG---------MLLNEKKVYVGHHIPKKDRQSKFEEMKANYTNIYIKNLHADVTDDEFRK 258
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F +Y + + + D+ TG+++G+GF+ F +A+ E+N + + +G A
Sbjct: 259 LFE-QYGAVTSSTIARDQETGKSRGFGFINFTTHESAAKAVEELNSREIHGQELYVGRAQ 317
Query: 253 NKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 312
K +++ + SY+ ++ ++ +++ NLD V DE LRELF+ YG +
Sbjct: 318 KKHE---REEELRKSYEAARQEKASKYVG-VNLYIKNLDDEVDDEKLRELFAPYGPITSA 373
Query: 313 KI 314
K+
Sbjct: 374 KV 375
>gi|149023878|gb|EDL80375.1| rCG31475, isoform CRA_a [Rattus norvegicus]
Length = 660
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AG 317
+ T V++ N V DE+LRELFSQ+G+ + VK+
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKS 230
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV + A +A+ +NG ++ G++I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAE 275
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 139/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A + +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAANKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLRELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A +A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|66516817|ref|XP_623816.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Apis
mellifera]
gi|380017726|ref|XP_003692798.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Apis
florea]
Length = 295
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 7/179 (3%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGA 136
P + LW+G L+ +M E+++ F GE VKV+RN+ TG+ GY F+ F + A
Sbjct: 4 PMVLCQLWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMA 63
Query: 137 ERVLQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG +P N FRLN AS K + +I+VGDL+ DV DY L F
Sbjct: 64 LDAMHKLNGKVIPGSNPAVRFRLNHASTTG--KPTAEREFSIWVGDLSTDVDDYSLYRAF 121
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPAT 252
A+Y S + AKV++D +G +KGYGFVRF +E EQ ++ MNG T+ ++I A
Sbjct: 122 AAKYNSIRTAKVILDS-SGFSKGYGFVRFANEEEQKNSLVTMNGYRGLGTKSLKICNAV 179
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ N V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEFTN--------------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 29/297 (9%)
Query: 59 QAAAPQAAGVAVPPQQQGQPGEIRT--LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
Q A P A A QQ ++ + L++G+L + E L F+ G V +++V R+
Sbjct: 24 QEATP--ASTASSESQQAGDNDVTSTSLYVGELDPSVSEALLYDLFSPIGSVASIRVCRD 81
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTI 176
T GY ++ F ++ ++ N TP+ + R+ W+ ++ + I
Sbjct: 82 AITKTSLGYAYVNFSDHEAGKQAIEKLNYTPIKG--KLCRIMWSQRDPSLRKKGHGN--I 137
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
F+ +L D+ + L +TF + + +K+ D TG++KG+GFV F +ES A+ +
Sbjct: 138 FIKNLNQDIDNKALFDTFSV-FGNILSSKIATDE-TGKSKGFGFVHFEEESAANEAIDAL 195
Query: 237 NGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTD 296
NG+ + + + + P +K Q + KA + T V+V N+D TD
Sbjct: 196 NGMLLNGQEIYVAPHLTRKERDSQLEETKAHF--------------TNVYVKNIDLETTD 241
Query: 297 EHLRELFSQYGQLVHVKIPAG-----KRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
E +E F + G + V + G K GFV + D + A +A+ LNG + Q +
Sbjct: 242 EEFKEFFGKIGTVTSVALERGPDGKLKGFGFVNYEDHNDAVKAVEELNGAEFKDQEL 298
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 138/293 (47%), Gaps = 28/293 (9%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ K+ + +TG+ +G+GF+ F + A +
Sbjct: 137 IFIKNLNQDIDNKALFDTFSVFGNILSSKIATD-ETGKSKGFGFVHFEEESAANEAIDAL 195
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT------IFVGDLAADVTDYMLQETFRAR 197
NG + NG++ + A ++RD + T ++V ++ + TD +E F
Sbjct: 196 NGMLL-NGQE---IYVAPHLTRKERDSQLEETKAHFTNVYVKNIDLETTDEEFKEFFGKI 251
Query: 198 YPSTKGAKVVIDRL-TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-- 254
T V ++R G+ KG+GFV + D ++ ++A+ E+NG + + +G A K
Sbjct: 252 GTVTS---VALERGPDGKLKGFGFVNYEDHNDAVKAVEELNGAEFKDQELFVGRAQKKYE 308
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
+ S ++QY + Q +FV NLD + DE L+E F+ +G + VK+
Sbjct: 309 RIQSLKKQYESTRLEKMAKYQG------VNLFVKNLDDSIDDEKLQEEFAPFGNITSVKV 362
Query: 315 P-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ N + G+ + ++ + +++Q
Sbjct: 363 MRTENGKSKGFGFVCFSSPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQ 415
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 260 QQQYPKASYQNSQVAQS-DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---- 314
QQ+ AS +S+ Q+ D+D +T+++VG LD V++ L +LFS G + +++
Sbjct: 23 QQEATPASTASSESQQAGDNDVTSTSLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDA 82
Query: 315 --PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG-RSPS 357
+V F+D ++A+ LN T + G+ R+ W R PS
Sbjct: 83 ITKTSLGYAYVNFSDHEAGKQAIEKLNYTPIKGKLCRIMWSQRDPS 128
>gi|149608633|ref|XP_001515603.1| PREDICTED: polyadenylate-binding protein 4 [Ornithorhynchus
anatinus]
Length = 630
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N + DE L+ELFS+YG+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV F A +A+ +NG + G+ + + + +QA+
Sbjct: 231 KGFGFVSFEKHEDANQAVEDMNGKDINGKMVFVGRAQKKVERQAE 275
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + D+ D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F ++Y T KV+ D +G++KG+GFV F + +A+ +MNG + + + +G A
Sbjct: 211 F-SKYGKTLSVKVMTDP-SGKSKGFGFVSFEKHEDANQAVEDMNGKDINGKMVFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G+ ++VKV+ + +G+ +G+GF+ F A +
Sbjct: 189 EFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-SGKSKGFGFVSFEKHEDANQA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEDMNGKDI-NGKMVF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKK 255
++P+ + A K+
Sbjct: 358 VGSKPLYVALAQRKE 372
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 139/285 (48%), Gaps = 27/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + ++ L F G+VV+V+V R+ + + GYG++ + + A R L
Sbjct: 30 SLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRALDV 89
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG R+ ++ ++ + + IF+ +L + L +TF A + S
Sbjct: 90 LNFTPL-NGNP-IRVMYSHRDPSVRKSGSGN--IFIKNLDKAIDHKALHDTFSA-FGSIL 144
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KV D +G++KG+GFV+F E L+A+ ++NG+ + + + +GP K+ +
Sbjct: 145 SCKVATDS-SGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQVFVGPFLRKQERESVSE 203
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGK 318
K + N VFV NL ++E L+ +F ++G + V +
Sbjct: 204 --KTKFNN--------------VFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKS 247
Query: 319 RC-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+C GFV F + A ++ LNG ++ G+ + + S ++ +
Sbjct: 248 KCFGFVNFENADDAARSVEALNGKKVDGKEWYVGKAQKKSEREVE 292
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 144/289 (49%), Gaps = 20/289 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + +GQ +G+GF++F + A + ++
Sbjct: 118 NIFIKNLDKAIDHKALHDTFSAFGSILSCKVATDS-SGQSKGFGFVQFDTEEAALKAIEK 176
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARY 198
NG + N +Q F F ++R+ + T +FV +LA ++ L+ F
Sbjct: 177 LNGMLL-NDKQVF---VGPFLRKQERESVSEKTKFNNVFVKNLAETTSEEDLKNMFGEFG 232
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
P T + VV+ G++K +GFV F + + R++ +NG + +G A K S
Sbjct: 233 PIT--SVVVMRDGEGKSKCFGFVNFENADDAARSVEALNGKKVDGKEWYVGKAQKK---S 287
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---P 315
++ K+ ++ S V ++ D ++V NLD + D+ L+ELF+ +G + K+ P
Sbjct: 288 EREVELKSRFEQS-VKEAADKYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDP 346
Query: 316 AG--KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
G + GFV F+ A AL +NG + + + ++ + +++A+
Sbjct: 347 NGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPLYVALAQRKEDRRAR 395
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 17/189 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L E L F G + +V V+R+ + G+ + +GF+ F + A R
Sbjct: 206 KFNNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGE-GKSKCFGFVNFENADDAARS 264
Query: 140 LQTFNGTPM-----------PNGEQNFRLNWASF--GAGEKRDDTPDHTIFVGDLAADVT 186
++ NG + E+ L + F E D ++V +L +
Sbjct: 265 VEALNGKKVDGKEWYVGKAQKKSEREVELK-SRFEQSVKEAADKYQGANLYVKNLDDSID 323
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
D L+E F + + KV+ D G ++G GFV F E RA+ EMNG ++P+
Sbjct: 324 DDKLKELFTG-FGTITSCKVMRDP-NGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPL 381
Query: 247 RIGPATNKK 255
+ A K+
Sbjct: 382 YVALAQRKE 390
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAE 275
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|402854031|ref|XP_003891684.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Papio anubis]
Length = 631
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ N V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEFTN--------------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|448111139|ref|XP_004201770.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359464759|emb|CCE88464.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 124/246 (50%), Gaps = 45/246 (18%)
Query: 42 MMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYL-NT 100
M + P+P P + + AAA + G P Q P RTLW+GDL W+DE + +
Sbjct: 93 MSVLPEP---PLSTKESSAAATKQHG---PLGHQENP---RTLWMGDLDPWLDEAAIADL 143
Query: 101 CFAHTGEVVAVKVIRNKQTG--------QIEGYGFIEFISRAGAERVLQTFNGTPMP--- 149
+ + V VK+IR + GY F+EF + A+ L + NG P+P
Sbjct: 144 WYDVLKKRVNVKLIRPRSHKTDFPYHGVSHLGYCFVEFDNLYDAQLAL-SLNGKPLPESA 202
Query: 150 ------------NGEQNFRLNWASFGAGEKRD----DTPDHTIFVGDLAADVTDYMLQET 193
N ++ FRLNWA+ G D TP+ ++FVGDL+A T+ L
Sbjct: 203 MPSQKVRSRNQDNQKKYFRLNWAN---GATLDAPIIHTPEFSLFVGDLSASTTEAHLLAF 259
Query: 194 FRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG--- 249
F+++YP S K +V+ D ++G+++ +GFVRF DE + +A+ EM G + R +R+
Sbjct: 260 FQSKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKALVEMQGTWFGGRQLRVALAS 319
Query: 250 PATNKK 255
P TN K
Sbjct: 320 PKTNAK 325
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%)
Query: 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338
DP NTTVFVG L S V D+ L LF +G + VKIP GK CGF++++ R AE+A+ +
Sbjct: 420 DPKNTTVFVGGLSSEVNDQTLFALFKPFGIIQQVKIPPGKNCGFIKYSKRQEAEDAIASM 479
Query: 339 NGTQLGGQNIRLSWGRSPSNKQ 360
G +GG +RLSWG+ +N +
Sbjct: 480 QGFIIGGNRVRLSWGKVSTNNK 501
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 284 TVFVGNLDSIVTDEHLRELF-SQYGQLVHVK------IPAGKRC-GFVQFADRSCAEEAL 335
++FVG+L + T+ HL F S+Y + V + RC GFV+F+D +AL
Sbjct: 241 SLFVGDLSASTTEAHLLAFFQSKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKAL 300
Query: 336 RMLNGTQLGGQNIRLSWGRSPSNKQA 361
+ GT GG+ +R++ +N +A
Sbjct: 301 VEMQGTWFGGRQLRVALASPKTNAKA 326
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|47219550|emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 623
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 36/290 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVVKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--- 314
+ + N V++ N + DE L+ELF +YG+ + VK+
Sbjct: 180 EAELGAKAKEFTN--------------VYIKNFGDDMNDERLKELFDKYGKTLSVKVMTD 225
Query: 315 PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
P GK GF+ + A +A+ +NGT+L G+ + + + +QA+
Sbjct: 226 PTGKSRGFGFISYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKMERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 136/290 (46%), Gaps = 24/290 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 144 NGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
NG + N + F + A GA K +++ + D+ D L+E F
Sbjct: 159 NGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMNDERLKELF-D 212
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+Y T KV+ D TG+++G+GF+ + + +A+ +MNG + + + +G A K
Sbjct: 213 KYGKTLSVKVMTDP-TGKSRGFGFISYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKME 271
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 316
+ + + ++++ +++ NLD + DE LR+ FS +G + K+
Sbjct: 272 RQAELKRKFEMLKQERISRY----QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 327
Query: 317 ----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 328 EEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL D+T+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVVKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ N V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEFTN--------------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ N V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEFTN--------------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ N V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEFTN--------------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|402854029|ref|XP_003891683.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Papio anubis]
Length = 644
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 150/325 (46%), Gaps = 37/325 (11%)
Query: 46 PQPQA-QPPA--MWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF 102
P PQ QPPA + + P A+G + P +L++G+L + E L F
Sbjct: 26 PAPQVVQPPAPVHASMPYSVPPASGASTPSA---------SLYVGELDSTVTEAMLFEIF 76
Query: 103 AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF 162
G V +++V R+ T + GY ++ +++ A ER L+ N + + N + R+ W+
Sbjct: 77 NMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLIKN--RACRIMWSQR 134
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
++ T IF+ +L + L +TF A + + KV D GR++G+GFV
Sbjct: 135 DPALRK--TGQGNIFIKNLDEQIDHKALHDTF-AAFGNVLSCKVATDE-NGRSRGFGFVH 190
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNN 282
+ A+ +NG+ + + + +G +KK K+ + N
Sbjct: 191 YDTAEAADTAIKAVNGMLLNDKKVFVGHYISKKERQAHIDEQKSQFTN------------ 238
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRM 337
++V NLD+ VTD+ ++F+++G++ + K GFV F D A+ A+
Sbjct: 239 --LYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEEGKSKGFGFVNFKDHESAQAAVDA 296
Query: 338 LNGTQLGGQNIRLSWGRSPSNKQAQ 362
L+ T+L G+ + ++ + + ++ +
Sbjct: 297 LHDTELNGKKLFVTRAQKKAEREEE 321
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 36/204 (17%)
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
TP +++VG+L + VT+ ML E F P +V D +T R+ GY +V + + ++
Sbjct: 53 TPSASLYVGELDSTVTEAMLFEIFNMIGP-VASIRVCRDAVTRRSLGYAYVNYLNAADGE 111
Query: 231 RAMTEMNGVFCSTRPMRI-----GPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTV 285
RA+ ++N R RI PA K +GQ +
Sbjct: 112 RALEQLNYSLIKNRACRIMWSQRDPALRK---TGQ----------------------GNI 146
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR-----CGFVQFADRSCAEEALRMLNG 340
F+ NLD + + L + F+ +G ++ K+ + GFV + A+ A++ +NG
Sbjct: 147 FIKNLDEQIDHKALHDTFAAFGNVLSCKVATDENGRSRGFGFVHYDTAEAADTAIKAVNG 206
Query: 341 TQLGGQNIRLSWGRSPSNKQAQPD 364
L + + + S +QA D
Sbjct: 207 MLLNDKKVFVGHYISKKERQAHID 230
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 19/214 (8%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
Q + L++ +L + + N FA GEV + V++ + G+ +G+GF+ F A
Sbjct: 232 QKSQFTNLYVKNLDTEVTDDEFNDMFAKFGEVTSA-VVQKDEEGKSKGFGFVNFKDHESA 290
Query: 137 ERVLQTFNGTPMPNG--------------EQNFRLNWASFGAGEKRDDTPDHTIFVGDLA 182
+ + + T + NG E+ R ++ EK +++ +L
Sbjct: 291 QAAVDALHDTEL-NGKKLFVTRAQKKAEREEELRKSYEQ-AKMEKLSKYQGANLYIKNLE 348
Query: 183 ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCS 242
D+ D L+ F + + K++ D G +KG+GFV + E +A+ EMN
Sbjct: 349 DDMDDDKLRAEFEP-FGTITSCKIMRDE-KGTSKGFGFVCYSSPEEATKAVAEMNNKMLG 406
Query: 243 TRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQS 276
++P+ + PA ++ Q + A+ N ++ Q+
Sbjct: 407 SKPLYVSPAQRREVRRQQLESQIAARNNFRMQQA 440
>gi|332248417|ref|XP_003273360.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|383411099|gb|AFH28763.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
gi|384941234|gb|AFI34222.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
Length = 631
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ N V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEFTN--------------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|149023880|gb|EDL80377.1| rCG31475, isoform CRA_c [Rattus norvegicus]
Length = 630
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AG 317
+ T V++ N V DE+LRELFSQ+G+ + VK+
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKS 230
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV + A +A+ +NG ++ G++I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A + +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAANKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLRELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q S N +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQERISRYQGVN--LYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A +A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|198386356|ref|NP_001094008.1| polyadenylate-binding protein 4 [Rattus norvegicus]
gi|183985833|gb|AAI66452.1| Pabpc4 protein [Rattus norvegicus]
Length = 644
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AG 317
+ T V++ N V DE+LRELFSQ+G+ + VK+
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKS 230
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV + A +A+ +NG ++ G++I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 139/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A + +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAANKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLRELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A +A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 139/285 (48%), Gaps = 27/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + ++ L F G+VV+V+V R+ + + GYG++ + + A R L
Sbjct: 30 SLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRALDV 89
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG R+ ++ ++ + + IF+ +L + L +TF A + S
Sbjct: 90 LNFTPL-NGNP-IRVMYSHRDPSVRKSGSGN--IFIKNLDKAIDHKALHDTFSA-FGSIL 144
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KV D +G++KG+GFV+F E L+A+ ++NG+ + + + +GP K+ +
Sbjct: 145 SCKVATDS-SGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQVFVGPFLRKQERESVSE 203
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGK 318
K + N VFV NL ++E L+ +F ++G + V +
Sbjct: 204 --KTKFNN--------------VFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKS 247
Query: 319 RC-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+C GFV F + A ++ LNG ++ G+ + + S ++ +
Sbjct: 248 KCFGFVNFENADDAARSVEALNGKKVDGKEWYVGKAQKKSEREVE 292
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 143/289 (49%), Gaps = 20/289 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + +GQ +G+GF++F + A + ++
Sbjct: 118 NIFIKNLDKAIDHKALHDTFSAFGSILSCKVATDS-SGQSKGFGFVQFDTEEAALKAIEK 176
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARY 198
NG + N +Q F F ++R+ + T +FV +LA ++ L+ F
Sbjct: 177 LNGMLL-NDKQVF---VGPFLRKQERESVSEKTKFNNVFVKNLAETTSEEDLKNMFGEFG 232
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
P T + VV+ G++K +GFV F + + R++ +NG + +G A K S
Sbjct: 233 PIT--SVVVMRDGEGKSKCFGFVNFENADDAARSVEALNGKKVDGKEWYVGKAQKK---S 287
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---P 315
++ K+ ++ S V ++ D ++V NLD + D+ L+ELF+ +G + K+ P
Sbjct: 288 EREVELKSRFEQS-VKEAADKYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDP 346
Query: 316 AG--KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
G + GFV F+ A AL +NG + + + ++ + ++ A+
Sbjct: 347 NGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPLYVALAQRKEDRIAR 395
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 17/189 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L E L F G + +V V+R+ + G+ + +GF+ F + A R
Sbjct: 206 KFNNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGE-GKSKCFGFVNFENADDAARS 264
Query: 140 LQTFNGTPM-----------PNGEQNFRLNWASF--GAGEKRDDTPDHTIFVGDLAADVT 186
++ NG + E+ L + F E D ++V +L +
Sbjct: 265 VEALNGKKVDGKEWYVGKAQKKSEREVELK-SRFEQSVKEAADKYQGANLYVKNLDDSID 323
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
D L+E F + + KV+ D G ++G GFV F E RA+ EMNG ++P+
Sbjct: 324 DDKLKELFTG-FGTITSCKVMRDP-NGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPL 381
Query: 247 RIGPATNKK 255
+ A K+
Sbjct: 382 YVALAQRKE 390
>gi|261199248|ref|XP_002626025.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239594233|gb|EEQ76814.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 783
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 36/283 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + E L F+ G+V +++V R+ T + GY ++ + + A ER L+
Sbjct: 56 SLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRD----DTPDHTIFVGDLAADVTDYMLQETFRARY 198
N T + + R+ W+ +RD T +F+ +L + + L +TF A +
Sbjct: 116 LNYTLIKG--KPCRIMWS------QRDPALRKTGQGNVFIKNLDTAIDNKALHDTF-AAF 166
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ KV D G +KGYGFV + A+ +NG+ + + + +G KK
Sbjct: 167 GNILSCKVAQDEF-GNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQ 225
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---- 314
+ + KA++ T V+V NLD+ VT+E RELF +YG + I
Sbjct: 226 SKFEEMKANF--------------TNVYVKNLDTKVTNEEFRELFGKYGDITSASITHDS 271
Query: 315 PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
GK GFV F A A+ LN + GQ +L GR+
Sbjct: 272 ETGKSRGFGFVNFVKHESAAAAVEELNDKEFKGQ--KLYVGRA 312
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 109/234 (46%), Gaps = 8/234 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAATNAIKH 202
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPS 200
NG + + + A K ++ + ++V +L VT+ +E F +Y
Sbjct: 203 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLDTKVTNEEFRELF-GKYGD 261
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A + D TG+++G+GFV F A+ E+N + + +G A K +
Sbjct: 262 ITSASITHDSETGKSRGFGFVNFVKHESAAAAVEELNDKEFKGQKLYVGRAQKKHE---R 318
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
++ + ++ ++V ++ ++V NL + DE LR+LF +G + ++
Sbjct: 319 EEELRKQHEAARVEKA-SKYQGVNLYVKNLTDDIDDEKLRDLFIGFGNITSARV 371
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 36/205 (17%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VG+L + VT+ ML E F + +V D +T R+ GY +V + + ++ RA+
Sbjct: 56 SLYVGELDSSVTEAMLFELFSS-IGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 235 EMNGVFCSTRPMRI-----GPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGN 289
++N +P RI PA K +GQ VF+ N
Sbjct: 115 DLNYTLIKGKPCRIMWSQRDPALRK---TGQ----------------------GNVFIKN 149
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLG 344
LD+ + ++ L + F+ +G ++ K+ K GFV + A A++ +NG L
Sbjct: 150 LDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLN 209
Query: 345 GQNIRLSWGRSPSNKQAQPDPNQWN 369
+ + + + ++Q++ + + N
Sbjct: 210 EKKVFVGHHIAKKDRQSKFEEMKAN 234
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 271 SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRC---GFVQ 324
+ A S P++ +++VG LDS VT+ L ELFS GQ+ +++ +R +V
Sbjct: 43 NSAAPSTTQPHSASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVN 102
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWG-RSPS 357
+ + + E AL LN T + G+ R+ W R P+
Sbjct: 103 YNNTADGERALEDLNYTLIKGKPCRIMWSQRDPA 136
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/247 (16%), Positives = 86/247 (34%), Gaps = 76/247 (30%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ +L + F G++ + + + +TG+ G+GF+ F+ A ++
Sbjct: 237 NVYVKNLDTKVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAAVEE 296
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGDLAA 183
N ++ F+ G +K+ + + ++V +L
Sbjct: 297 LN-------DKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTD 349
Query: 184 DVTDYMLQETF------------------------RARYPSTK----------------- 202
D+ D L++ F + + S K
Sbjct: 350 DIDDEKLRDLFIGFGNITSARVMRDTIADAGSESEKEKEISNKENVKEEAKKESAEEESS 409
Query: 203 ---------GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
+K +++ G++KG+GFV F + E +A+TEMN + +P+ + A
Sbjct: 410 DKSDKAEKSDSKKTLEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQR 469
Query: 254 KKTVSGQ 260
K Q
Sbjct: 470 KDVRKSQ 476
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ N V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEFTN--------------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAE 275
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 132/269 (49%), Gaps = 33/269 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + + L F+ G VV+V+V R+ T GY ++ F S A A R L+
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEM 99
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG+ R+ +++ ++ + IF+ +L + + L +TF + +
Sbjct: 100 LNFTPI-NGKP-IRIMYSNRDPSSRKSGAAN--IFIKNLDKSIDNKALYDTFSV-FGNIL 154
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---KTVSG 259
KV + ++G +KGYGFV+F E A++++NG+ + + + +GP K + VSG
Sbjct: 155 SCKVATE-MSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSG 213
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----P 315
+P V+V NL T+++L+E+F ++G + V +
Sbjct: 214 -------------------NPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGD 254
Query: 316 AGKRC-GFVQFADRSCAEEALRMLNGTQL 343
RC GFV F + A A+ LNG +
Sbjct: 255 GKSRCFGFVNFENPDDAARAVEDLNGKKF 283
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 139/290 (47%), Gaps = 21/290 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G +++ KV + +G+ +GYGF++F A+ +
Sbjct: 128 NIFIKNLDKSIDNKALYDTFSVFGNILSCKVA-TEMSGESKGYGFVQFELEEAAQNAISK 186
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH----TIFVGDLAADVTDYMLQETFRARY 198
NG + + ++ F ++R++ + ++V +L+ T+ L+E F
Sbjct: 187 LNGMLL----NDKKVYVGPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIFGKFG 242
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
P T + VV+ G+++ +GFV F + + RA+ ++NG + + A K S
Sbjct: 243 PIT--SVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKK---S 297
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKIP-- 315
++ K ++ + + ++ D T +++ NLD SI DE L+E+F+ +G + K+
Sbjct: 298 EREMELKEKFEKN-IKEAADKNQGTNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRD 356
Query: 316 ---AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F A AL +NG +G + + ++ + ++A+
Sbjct: 357 LNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRKEERRAR 406
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 26/194 (13%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L E L F G + +V V+R + G+ +GF+ F + A R
Sbjct: 216 KFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMR-EGDGKSRCFGFVNFENPDDAARA 274
Query: 140 LQTFNGTPMPNGE-----------------QNFRLNWASFGAGEKRDDTPDHTIFVGDLA 182
++ NG + E + F N E D +++ +L
Sbjct: 275 VEDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIK-----EAADKNQGTNLYLKNLD 329
Query: 183 ADVTD-YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ D L+E F A + + KV+ D L G +KG GFV F + RA+ MNG
Sbjct: 330 DSIDDDEKLKEIF-ADFGTITSCKVMRD-LNGVSKGSGFVAFKSAEDASRALVAMNGKMI 387
Query: 242 STRPMRIGPATNKK 255
++P+ + A K+
Sbjct: 388 GSKPLYVALAQRKE 401
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--PAGKRC----GFVQFADRSCAEEALR 336
T+++VG+LD V D L ++FSQ G +V V++ R +V F+ + A AL
Sbjct: 39 TSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE 98
Query: 337 MLNGTQLGGQNIRLSWG-RSPSNKQA 361
MLN T + G+ IR+ + R PS++++
Sbjct: 99 MLNFTPINGKPIRIMYSNRDPSSRKS 124
>gi|332248413|ref|XP_003273358.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|355557859|gb|EHH14639.1| hypothetical protein EGK_00600 [Macaca mulatta]
gi|383411103|gb|AFH28765.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
gi|384941238|gb|AFI34224.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
Length = 660
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ N V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEFTN--------------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAE 275
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|332248415|ref|XP_003273359.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|383411101|gb|AFH28764.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
gi|384941236|gb|AFI34223.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
Length = 644
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ N V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEFTN--------------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ N V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEFTN--------------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 141/287 (49%), Gaps = 27/287 (9%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ +L++GDL + ++ L F G+VV+V+V R+ + + GYG++ + + A R L
Sbjct: 26 VTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARAL 85
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
+ N TP+ + R+ +++ +R + + IF+ +L + L +TF A + +
Sbjct: 86 EVLNFTPLHG--KPIRIMYSNRDPTIRR--SGNGNIFIKNLDKAIDHKALHDTFSA-FGN 140
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
KV +D +G++KGYGFV++ + +A+ ++NG+ + + + +GP K+
Sbjct: 141 ILSCKVAVDS-SGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVGPFVRKQ----- 194
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PA 316
+ + D T VFV NL +E LR++F ++G + V +
Sbjct: 195 -----------ERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFGTITSVAVMKDEDG 243
Query: 317 GKRC-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
RC GFV F + A A+ LNG +L ++ + + S ++ +
Sbjct: 244 KSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKKSEREME 290
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 141/287 (49%), Gaps = 16/287 (5%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + +GQ +GYGF+++ S A++ ++
Sbjct: 116 NIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDS-SGQSKGYGFVQYDSDEAAQKAIEK 174
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS-- 200
NG + N +Q + F ++RD D T F ++++ L+E R +
Sbjct: 175 LNGMLL-NDKQVY---VGPFVRKQERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFG 230
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
T + V+ G+++ +GFV F + + RA+ +NG + +G A K S +
Sbjct: 231 TITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKK---SER 287
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG 317
+ K ++ S ++ D +++ NLD ++D+ L+ELFS YG + K+ P+G
Sbjct: 288 EMELKHRFEQS-AQEAVDKSQGLNLYLKNLDDSISDDKLKELFSPYGTITSCKVMRDPSG 346
Query: 318 --KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A AL +NG + + + ++ + ++A+
Sbjct: 347 VSKGSGFVAFSTPEEASRALSEMNGKMVVSKPLYVALAQRKEERRAR 393
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAE 275
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|332030538|gb|EGI70226.1| tRNA selenocysteine 1-associated protein 1 [Acromyrmex echinatior]
Length = 295
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 101/182 (55%), Gaps = 13/182 (7%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGA 136
P + LW+G L+ +M E+++ F GE VKV+RN+ TG+ GY F+ F + A
Sbjct: 4 PMVLCQLWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMA 63
Query: 137 ERVLQTFNGTPMP--NGEQNFRLNWASFG---AGEKRDDTPDHTIFVGDLAADVTDYMLQ 191
+ NG +P N FRLN AS A E+ + +I+VGDL+ DV DY L
Sbjct: 64 LDAMHKLNGKVIPGSNPPVRFRLNHASTTGKPAAER-----EFSIWVGDLSTDVDDYSLY 118
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGP 250
F A+Y S + AKV++D +G +KGYGFVRF +E EQ ++ MNG T+ ++I
Sbjct: 119 RAFAAKYNSIRTAKVILDS-SGFSKGYGFVRFANEEEQKNSLITMNGYRGLGTKSLKICN 177
Query: 251 AT 252
A
Sbjct: 178 AV 179
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + +L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKVLYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 138/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKVLYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKVLYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ N V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 185 AKAKEFTN--------------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|239615396|gb|EEQ92383.1| polyadenylate-binding protein [Ajellomyces dermatitidis ER-3]
gi|327356743|gb|EGE85600.1| polyadenylate-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 783
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 36/283 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + E L F+ G+V +++V R+ T + GY ++ + + A ER L+
Sbjct: 56 SLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRD----DTPDHTIFVGDLAADVTDYMLQETFRARY 198
N T + + R+ W+ +RD T +F+ +L + + L +TF A +
Sbjct: 116 LNYTLIKG--KPCRIMWS------QRDPALRKTGQGNVFIKNLDTAIDNKALHDTF-AAF 166
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ KV D G +KGYGFV + A+ +NG+ + + + +G KK
Sbjct: 167 GNILSCKVAQDEF-GNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQ 225
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---- 314
+ + KA++ T V+V NLD+ VT+E RELF +YG + I
Sbjct: 226 SKFEEMKANF--------------TNVYVKNLDTEVTNEEFRELFGKYGDITSASITHDS 271
Query: 315 PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
GK GFV F A A+ LN + GQ +L GR+
Sbjct: 272 ETGKSRGFGFVNFVKHESAAAAVEELNDKEFKGQ--KLYVGRA 312
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 110/234 (47%), Gaps = 8/234 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAATNAIKH 202
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPS 200
NG + + + A K ++ + ++V +L +VT+ +E F +Y
Sbjct: 203 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLDTEVTNEEFRELF-GKYGD 261
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A + D TG+++G+GFV F A+ E+N + + +G A K +
Sbjct: 262 ITSASITHDSETGKSRGFGFVNFVKHESAAAAVEELNDKEFKGQKLYVGRAQKKHE---R 318
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
++ + ++ ++V ++ ++V NL + DE LR+LF +G + ++
Sbjct: 319 EEELRKQHEAARVEKA-SKYQGVNLYVKNLTDDIDDEKLRDLFIGFGNITSARV 371
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 36/205 (17%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VG+L + VT+ ML E F + +V D +T R+ GY +V + + ++ RA+
Sbjct: 56 SLYVGELDSSVTEAMLFELFSS-IGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 235 EMNGVFCSTRPMRI-----GPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGN 289
++N +P RI PA K +GQ VF+ N
Sbjct: 115 DLNYTLIKGKPCRIMWSQRDPALRK---TGQ----------------------GNVFIKN 149
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLG 344
LD+ + ++ L + F+ +G ++ K+ K GFV + A A++ +NG L
Sbjct: 150 LDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLN 209
Query: 345 GQNIRLSWGRSPSNKQAQPDPNQWN 369
+ + + + ++Q++ + + N
Sbjct: 210 EKKVFVGHHIAKKDRQSKFEEMKAN 234
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 271 SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRC---GFVQ 324
+ A S P++ +++VG LDS VT+ L ELFS GQ+ +++ +R +V
Sbjct: 43 NSAAPSTTQPHSASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVN 102
Query: 325 FADRSCAEEALRMLNGTQLGGQNIRLSWG-RSPS 357
+ + + E AL LN T + G+ R+ W R P+
Sbjct: 103 YNNTADGERALEDLNYTLIKGKPCRIMWSQRDPA 136
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/247 (16%), Positives = 86/247 (34%), Gaps = 76/247 (30%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ +L + F G++ + + + +TG+ G+GF+ F+ A ++
Sbjct: 237 NVYVKNLDTEVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAAVEE 296
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGDLAA 183
N ++ F+ G +K+ + + ++V +L
Sbjct: 297 LN-------DKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTD 349
Query: 184 DVTDYMLQETF------------------------RARYPSTK----------------- 202
D+ D L++ F + + S K
Sbjct: 350 DIDDEKLRDLFIGFGNITSARVMRDTIADAGSESEKEKEISNKENVKEEAKKESAEEESS 409
Query: 203 ---------GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
+K +++ G++KG+GFV F + E +A+TEMN + +P+ + A
Sbjct: 410 DKSDKAEKSDSKKTLEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQR 469
Query: 254 KKTVSGQ 260
K Q
Sbjct: 470 KDVRKSQ 476
>gi|70947056|ref|XP_743180.1| polyadenylate-binding protein [Plasmodium chabaudi chabaudi]
gi|56522555|emb|CAH74716.1| polyadenylate-binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 629
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 141/288 (48%), Gaps = 28/288 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F G V++++V R+ T + GY ++ + + A AER L T
Sbjct: 17 SLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + Q RL W+ ++ T + IFV +L + + L +TF + + +
Sbjct: 77 LNYTNIKG--QPARLMWSHRDPSLRKSGTGN--IFVKNLDKTIDNKALFDTF-SMFGNIL 131
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KV D G++K YGFV + DE A+ ++NG+ ++ + +G
Sbjct: 132 SCKVATDEF-GKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVG------------H 178
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---GKR 319
+ K S ++ +D T ++V N VT+ HL+ELFS YG++ + + + ++
Sbjct: 179 FIKKS------ERATNDTKFTNLYVKNFPDTVTEAHLKELFSPYGEITSMIVKSDNKNRK 232
Query: 320 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 367
F+ ++D A A+ LNG ++ ++ ++ P ++A+ N+
Sbjct: 233 FCFINYSDADSARNAMENLNGKKI-TEDGKIDHNYDPKKEEAEKAANE 279
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 166 EKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
E R+ P +++ +L + D L+E F Y + AKV+ D ++KG+GFV FG
Sbjct: 392 ESRNKHPGVNLYIKNLDDSMDDQTLKELFEP-YGTITSAKVMKDD-KDQSKGFGFVCFGT 449
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPA 251
E +A+TEM+ + +P+ +G A
Sbjct: 450 HEEANKAVTEMHLKIINGKPLYVGLA 475
>gi|354485887|ref|XP_003505113.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
Length = 685
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 34 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 93
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 94 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 148
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 149 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 206
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ N V++ N V D++L+ELFSQ+G+ + VK+ P+GK
Sbjct: 207 AKAKEFTN--------------VYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKS 252
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 253 KGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAE 297
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 120 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 177
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 178 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDDNLKEL 232
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 233 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRA-- 288
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 289 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 346
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 347 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 399
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
R P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F +
Sbjct: 27 RGHYPMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPA 85
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
+ RA+ MN +P+RI Q+ P S + S V VF+
Sbjct: 86 DAERALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFI 125
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQL 343
NLD + ++ L + FS +G ++ K+ K FV F + A++A+ +NG L
Sbjct: 126 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLL 185
Query: 344 GGQNIRLSWGRSPSNKQAQ 362
+ + + +S ++A+
Sbjct: 186 NDRKVFVGRFKSRKEREAE 204
>gi|119496945|ref|XP_001265244.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
gi|158512647|sp|A1D4K4.1|PABP_NEOFI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119413406|gb|EAW23347.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
Length = 751
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 145/308 (47%), Gaps = 34/308 (11%)
Query: 53 PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
P + A ++A+P A A P +L++G+L + E L F+ G+V +++
Sbjct: 30 PEVTAVESASPSATPSANQPHSA-------SLYVGELDPSVTEAMLYELFSSIGQVASIR 82
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP 172
V R+ T + GY ++ + + A ER L+ N T + + R+ W+ ++ T
Sbjct: 83 VCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKG--KPCRIMWSQRDPALRK--TG 138
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+F+ +L A + + L +TF A + + KV D G +KGYGFV + A
Sbjct: 139 QGNVFIKNLDAAIDNKALHDTF-AAFGNILSCKVAQDEF-GNSKGYGFVHYETAEAANNA 196
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDS 292
+ +NG+ + + + +G +KK + + KA++ N V++ N+D
Sbjct: 197 IKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTN--------------VYIKNIDQ 242
Query: 293 IVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
VTDE R++F ++G++ + + GFV F+ A+ A+ +N ++ GQ
Sbjct: 243 EVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQ- 301
Query: 348 IRLSWGRS 355
+L GR+
Sbjct: 302 -KLYVGRA 308
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 25/241 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 142 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHV 200
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--------TIFVGDLAADVTDYMLQETFR 195
NG + N ++ F + S K+D +++ ++ +VTD ++ F
Sbjct: 201 NGMLL-NDKKVFVGHHIS-----KKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFE 254
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK- 254
++ A + D+ G+++G+GFV F A+ EMN + + +G A K
Sbjct: 255 -KFGEITSATLSRDQ-EGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKH 312
Query: 255 -KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+ ++QY A + + Q ++V NL V DE LRELFS +G + K
Sbjct: 313 EREEELRKQYEAARLEKASKYQG------VNLYVKNLTDDVDDEKLRELFSPFGTITSAK 366
Query: 314 I 314
+
Sbjct: 367 V 367
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 85/234 (36%), Gaps = 60/234 (25%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I ++ + + F GE+ + + R+ Q G+ G+GF+ F + A+ +
Sbjct: 235 VYIKNIDQEVTDEEFRKMFEKFGEITSATLSRD-QEGKSRGFGFVNFSTHDSAQAAVDEM 293
Query: 144 NGTPMP-------------NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYML 190
N + E+ R + + EK ++V +L DV D L
Sbjct: 294 NDKEIKGQKLYVGRAQKKHEREEELRKQYEA-ARLEKASKYQGVNLYVKNLTDDVDDEKL 352
Query: 191 QETFRARYPSTKGAKVVIDRLT-------------------------------------- 212
+E F + + + AKV+ D +T
Sbjct: 353 RELF-SPFGTITSAKVMRDTVTAGETSESEKEKESNKENEKEGEEKTEEKPKESEEEAKK 411
Query: 213 ------GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
G++KG+GFV F E +A+TEMN + +P+ + A K Q
Sbjct: 412 TEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQ 465
>gi|41152034|ref|NP_958453.1| polyadenylate-binding protein 4 [Danio rerio]
gi|31419252|gb|AAH53126.1| Poly(A) binding protein, cytoplasmic 4 (inducible form) [Danio
rerio]
Length = 637
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 36/290 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 13 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 72
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 73 MNFDVVKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 122
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 123 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 180
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--- 314
+ + N V++ N + D+ L+ELF +YG+ + VK+
Sbjct: 181 EAEMGAKAKEFTN--------------VYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTD 226
Query: 315 PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
P GK GFV + A +A+ +NGT+L G+ + + + +QA+
Sbjct: 227 PTGKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAE 276
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 136/290 (46%), Gaps = 24/290 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 102 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 159
Query: 144 NGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
NG + N + F + A GA K +++ + D+ D L+E F
Sbjct: 160 NGMLL-NDRKVFVGRFKSRKEREAEMGAKAKEFTN----VYIKNFGDDMDDQRLKELF-D 213
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+Y T KV+ D TG+++G+GFV + + +A+ EMNG + + + +G A K
Sbjct: 214 KYGKTLSVKVMTDP-TGKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKME 272
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 316
+ + + ++++ +++ NLD + DE LR+ FS +G + K+
Sbjct: 273 RQAELKRKFEQLKQERISRY----QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 328
Query: 317 ----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 329 EEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 378
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL D+T+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 10 PMASLYVGDLHPDITEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 68
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 69 ALDTMNFDVVKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 108
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L +
Sbjct: 109 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRK 168
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 169 VFVGRFKSRKEREAE 183
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F G+ ++VKV+ + TG+ G+GF+ + A +
Sbjct: 190 EFTNVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTDP-TGKSRGFGFVSYEKHEDANKA 248
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NGT + NG+ F G +K+ + +++ +
Sbjct: 249 VEEMNGTEL-NGKTVF------VGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKN 301
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 302 LDDTIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRI 358
Query: 241 CSTRPMRIGPATNKK 255
++P+ + A K+
Sbjct: 359 VGSKPLYVALAQRKE 373
>gi|124806145|ref|XP_001350640.1| polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|23496765|gb|AAN36320.1|AE014847_47 polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|119352249|gb|ABL63812.1| polyadenylate-binding protein [Plasmodium falciparum]
Length = 875
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 27/264 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F G V +++V R+ T + GY ++ + + A AER L T
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + Q RL W+ ++ T + IFV +L + + L +TF + + +
Sbjct: 77 LNYTNIKG--QPARLMWSHRDPSLRKSGTGN--IFVKNLDKSIDNKALFDTF-SMFGNIL 131
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KV D G++K YGFV + DE A+ ++NGV ++ + +GP K
Sbjct: 132 SCKVATDEF-GKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNVYVGPFIKKS------- 183
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGKR 319
++ +D T ++V N VT+ HLR+LF+ YG++ + + ++
Sbjct: 184 -----------ERATNDTKFTNLYVKNFPDSVTETHLRQLFNPYGEITSMIVKMDNKNRK 232
Query: 320 CGFVQFADRSCAEEALRMLNGTQL 343
F+ +AD A+ A+ LNG ++
Sbjct: 233 FCFINYADAESAKNAMDNLNGKKI 256
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 36/184 (19%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VGDL DVT+ +L E F +V D +T ++ GY +V + + ++ RA+
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNT-VGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALD 75
Query: 235 EMNGVFCSTRPMRI-----GPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGN 289
+N +P R+ P+ +K+ +G +FV N
Sbjct: 76 TLNYTNIKGQPARLMWSHRDPSL-RKSGTG------------------------NIFVKN 110
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQLG 344
LD + ++ L + FS +G ++ K+ K GFV + D A+EA+ +NG QLG
Sbjct: 111 LDKSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQLG 170
Query: 345 GQNI 348
+N+
Sbjct: 171 SKNV 174
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++ +L + D ML+E F + + AKV+ D ++KG+GFV F + E +A+TE
Sbjct: 452 LYIKNLDDGIDDIMLRELFEP-FGTITSAKVMRDE-KEQSKGFGFVCFASQEEANKAVTE 509
Query: 236 MNGVFCSTRPMRIGPA 251
M+ + +P+ +G A
Sbjct: 510 MHLKIINGKPLYVGLA 525
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKRCG--FVQFADRSCAEEALRM 337
+++VG+L+ VT+ L E+F+ G + +++ K G +V + + + AE AL
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 338 LNGTQLGGQNIRLSWG-RSPS 357
LN T + GQ RL W R PS
Sbjct: 77 LNYTNIKGQPARLMWSHRDPS 97
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 265 KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-----PAGKR 319
KA + N V ++ + +++ NLD + D LRELF +G + K+ K
Sbjct: 433 KAKFDNLNV-ENKNKHQGVNLYIKNLDDGIDDIMLRELFEPFGTITSAKVMRDEKEQSKG 491
Query: 320 CGFVQF-----ADRSCAEEALRMLNG 340
GFV F A+++ E L+++NG
Sbjct: 492 FGFVCFASQEEANKAVTEMHLKIING 517
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 140/289 (48%), Gaps = 34/289 (11%)
Query: 60 AAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
+P A GVA QP +L++GDL+ + ++ L F+ G+VV+V+V R+ +
Sbjct: 19 VVSPGAVGVA-------QPLPTTSLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVTS 71
Query: 120 GQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVG 179
+ GY ++ + + A R L+ N + N + R+ +++ +R + + IF+
Sbjct: 72 RRSLGYAYVNYSNPLDAARALEVLNFAALNN--KPIRVMYSNRDPSSRRSGSAN--IFIK 127
Query: 180 DLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
+L + + L ETF + + + KV +D G++KG+GFV++ E A+ +NG+
Sbjct: 128 NLDKTIDNKTLHETF-SSFGTILSCKVAVDE-AGQSKGFGFVQYDKEEAAQNAIKSLNGM 185
Query: 240 FCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 299
+ +P+ +GP K+ + K + N VFV NL T E L
Sbjct: 186 LINDKPVFVGPFVRKQ--ERDHSFDKTKFNN--------------VFVKNLSESTTKEDL 229
Query: 300 RELFSQYGQL----VHVKIPAGKRC-GFVQFADRSCAEEALRMLNGTQL 343
++F +YG + V + + RC GF+ F + A A++ LNG ++
Sbjct: 230 LKIFGEYGDITSAVVMIGMDGKSRCFGFINFENPDAASHAVQELNGKKI 278
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 142/287 (49%), Gaps = 20/287 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ F+ G +++ KV + + GQ +G+GF+++ A+ +++
Sbjct: 124 IFIKNLDKTIDNKTLHETFSSFGTILSCKVAVD-EAGQSKGFGFVQYDKEEAAQNAIKSL 182
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARYP 199
NG + N + F F ++RD + D T +FV +L+ T L + F Y
Sbjct: 183 NGM-LINDKPVF---VGPFVRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKIF-GEYG 237
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
A V+I + G+++ +GF+ F + A+ E+NG + + +G A K S
Sbjct: 238 DITSAVVMIG-MDGKSRCFGFINFENPDAASHAVQELNGKKINDKEWYVGRAQKK---SE 293
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---- 315
++ K ++ S + + D +++ NLD + D+ L ELFS +G++ K+
Sbjct: 294 REMELKRRFEQS-LKDAADKYQGLNLYLKNLDDSIGDDQLCELFSNFGKITSYKVMRDQN 352
Query: 316 -AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 361
K GFV F+ R A +AL +NG + G+ + +++ + +++A
Sbjct: 353 GLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKA 399
>gi|62088002|dbj|BAD92448.1| TIA1 protein variant [Homo sapiens]
Length = 464
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 167/381 (43%), Gaps = 65/381 (17%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 45 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 102
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 103 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 160
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 161 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 219
Query: 251 ATNK----------KTVSGQ-------QQYPKASYQNSQVAQSDD--------------- 278
AT K + + + ++Y + S +A+ D+
Sbjct: 220 ATRKPPAPKSTYECRCIGEEKEMWNFGEKYARFSCSRRLIAEIDEKQIKTTIQKSNTKQL 279
Query: 279 ---------DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRS 329
P+N TV+ G + S +T++ +R+ FS +GQ++ +++ K FV+F
Sbjct: 280 SYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHE 339
Query: 330 CAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAP 389
A A+ +NGT + G ++ WG+ + NQ GY Q Y +G
Sbjct: 340 SAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQNQ-----IGYPQPYGQWGQWYGNA 394
Query: 390 QDPSMYY-GGY--PGYGNYQQ 407
Q Y G+ P YG Y Q
Sbjct: 395 QQIGQYMPNGWQVPAYGMYGQ 415
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 146/300 (48%), Gaps = 31/300 (10%)
Query: 58 TQAAAPQAAGVAVPPQQQGQPGEIRT------LWIGDLQYWMDETYLNTCFAHTGEVVAV 111
T+ A Q +++ +Q+G E ++ L++GDL + E +L F+ G V ++
Sbjct: 5 TEKTAEQLENLSLQDKQEGTNEENQSETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSI 64
Query: 112 KVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT 171
+V R+ T GY ++ F A+ ++ N TP+ + R+ W+ ++
Sbjct: 65 RVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKG--KLCRIMWSQRDPSLRKKGA 122
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
+ IF+ +L D+ + L +TF + + +KV D TG++KG+G+V F ++
Sbjct: 123 GN--IFIKNLHPDIDNKALYDTFSV-FGNILSSKVATDE-TGKSKGFGYVHFEEDESASE 178
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ +NG+ + + + +GP +KK + + KA++ T V++ N++
Sbjct: 179 AIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKANF--------------TNVYIKNIN 224
Query: 292 SIVTDEHLRELFSQYGQ---LVHVKIPAG--KRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
+ TD+ EL +++G+ +V + P G K GFV F + A + + LN T+ GQ
Sbjct: 225 TETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQ 284
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 133/288 (46%), Gaps = 18/288 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV + +TG+ +G+G++ F A +
Sbjct: 125 IFIKNLHPDIDNKALYDTFSVFGNILSSKVATD-ETGKSKGFGYVHFEEDESASEAIDAL 183
Query: 144 NGTPMPNGEQNF---RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG + NG++ + L+ + + +++ ++ + TD +E A++
Sbjct: 184 NGMLL-NGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFEELV-AKFGK 241
Query: 201 TKGAKVVIDRL-TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
T VV++R G KG+GFV F + + ++ + E+N +P+ + A K
Sbjct: 242 TDS--VVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYE--- 296
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA--- 316
+QQ K Y+ +++ + +F+ NLD + D+ L E F+ YG + K+
Sbjct: 297 RQQELKKQYEATRMEKMAK-YQGINLFIKNLDDSIDDKKLEEEFAPYGTITSAKVMTTEN 355
Query: 317 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ N + G+ + ++ + +++Q
Sbjct: 356 GKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQ 403
>gi|225441084|ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
vinifera]
gi|297740018|emb|CBI30200.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 142/298 (47%), Gaps = 30/298 (10%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
+AVPP P +L++GDL + + L F+ + +V++ R+ +G+ YG+
Sbjct: 1 MAVPPTVPAAPA---SLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGY 57
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTD 187
+ FIS A ++ N T M +G+ R+ W+ +R + +FV +L+ + +
Sbjct: 58 VNFISPQDASHAIEAKNHT-MLHGKV-IRVMWSHRDPDARRSGIGN--VFVKNLSDSIDN 113
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
LQ F+ ++ + KVV+ G++KGYGFV+F E A+ ++NG
Sbjct: 114 VRLQAMFQ-KFGNILSCKVVVTE-DGKSKGYGFVQFESEEYANAAIEKLNGFI------- 164
Query: 248 IGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 307
+ G+Q Y + + + D T +++ NLD VT+E LRE F ++G
Sbjct: 165 ---------IDGKQIYAGKFVRKTDRVLPNPDAKYTNLYIKNLDPDVTEEALREKFFEFG 215
Query: 308 QLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 360
++ + I + GFV F A+ AL LNG QLG + + ++ + + ++
Sbjct: 216 KIASLVISKDENGMSRGFGFVNFESPEDAKRALEALNGLQLGSKVLYVARAQKKAERE 273
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 26/294 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
I +++ +L +D L F G +++ KV+ + G+ +GYGF++F S A +
Sbjct: 99 IGNVFVKNLSDSIDNVRLQAMFQKFGNILSCKVVVT-EDGKSKGYGFVQFESEEYANAAI 157
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRD------DTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + +G+Q + + K D D +++ +L DVT+ L+E F
Sbjct: 158 EKLNGFII-DGKQIYAGKFV-----RKTDRVLPNPDAKYTNLYIKNLDPDVTEEALREKF 211
Query: 195 RARYPSTKGAKVVIDR-LTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
+ K A +VI + G ++G+GFV F + RA+ +NG+ ++ + + A
Sbjct: 212 ---FEFGKIASLVISKDENGMSRGFGFVNFESPEDAKRALEALNGLQLGSKVLYVARAQK 268
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
K + +N Q+ + + V+V N+D V D+ LRE FS G++ K
Sbjct: 269 KAEREQLLRRQFEEKRNEQILKY----RGSNVYVKNIDDNVNDDDLREHFSVCGKITSAK 324
Query: 314 IP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +G + + ++ + ++QAQ
Sbjct: 325 LMRDQKGISKGFGFVCFSTPDEASKAVNTFHGYMFHRKPLYVAIAQRKEDRQAQ 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 25/197 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L+I +L + E L F G++ ++ VI + G G+GF+ F S A+R L+
Sbjct: 192 NLYIKNLDPDVTEEALREKFFEFGKIASL-VISKDENGMSRGFGFVNFESPEDAKRALEA 250
Query: 143 FNGTPMPNG-------------EQNFRLNWASFGAGEKRDDTP----DHTIFVGDLAADV 185
NG + + EQ R + EKR++ ++V ++ +V
Sbjct: 251 LNGLQLGSKVLYVARAQKKAEREQLLRRQFE-----EKRNEQILKYRGSNVYVKNIDDNV 305
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
D L+E F T AK++ D+ G +KG+GFV F E +A+ +G +P
Sbjct: 306 NDDDLREHFSVCGKIT-SAKLMRDQ-KGISKGFGFVCFSTPDEASKAVNTFHGYMFHRKP 363
Query: 246 MRIGPATNKKTVSGQQQ 262
+ + A K+ Q Q
Sbjct: 364 LYVAIAQRKEDRQAQLQ 380
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ N V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 185 AKAKEFTN--------------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 140/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D TG++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-TGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q S N +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQERISRYQGVN--LYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|85097328|ref|XP_960425.1| polyadenylate-binding protein [Neurospora crassa OR74A]
gi|74696454|sp|Q7S6N6.1|PABP_NEUCR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|28921916|gb|EAA31189.1| polyadenylate-binding protein [Neurospora crassa OR74A]
Length = 764
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 131/271 (48%), Gaps = 25/271 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + E L F+ G V +++V R+ T + GY ++ + + A E+ L+
Sbjct: 61 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 120
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + + R+ W+ ++ T IF+ +L A + + L +TF A + +
Sbjct: 121 LNYTLIKG--RPCRIMWSQRDPALRK--TGAGNIFIKNLDAAIDNKALHDTF-AAFGNIL 175
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KV D G +KGYGFV + + +A+ +NG+ + + + +G KK + +
Sbjct: 176 SCKVAQDE-HGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFE 234
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AG 317
KA++ T V+V N+++ VTDE RELF+++G++ +
Sbjct: 235 EMKANF--------------TNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKS 280
Query: 318 KRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
+ GFV F A +A+ LNG GQ++
Sbjct: 281 RGFGFVNFTTHEAAAQAVDELNGKDFRGQDL 311
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 116/245 (47%), Gaps = 31/245 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV +++ G +GYGF+ + + A + ++
Sbjct: 149 NIFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEH-GNSKGYGFVHYETDEAASQAIKH 207
Query: 143 FNG-------------TPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
NG P + + F A+F ++V ++ +VTD
Sbjct: 208 VNGMLLNEKKVYVGHHIPKKDRQSKFEEMKANF-----------TNVYVKNINNEVTDEE 256
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
+E F A++ + + D+ G+++G+GFV F +A+ E+NG + + +G
Sbjct: 257 FRELF-AKFGEVTSSSLARDQ-EGKSRGFGFVNFTTHEAAAQAVDELNGKDFRGQDLYVG 314
Query: 250 PATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 309
A K +++ + SY+ +++ ++ + +++ NL V D+ LR +FS+YG +
Sbjct: 315 RAQKKHE---REEELRKSYEAARLEKA-NKYQGVNLYIKNLGDDVDDDKLRAMFSEYGPI 370
Query: 310 VHVKI 314
K+
Sbjct: 371 TSAKV 375
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 86/237 (36%), Gaps = 68/237 (28%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ ++ + + FA GEV + + R+ Q G+ G+GF+ F + A + +
Sbjct: 242 NVYVKNINNEVTDEEFRELFAKFGEVTSSSLARD-QEGKSRGFGFVNFTTHEAAAQAVDE 300
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGDLAA 183
NG ++FR G +K+ + + +++ +L
Sbjct: 301 LNG-------KDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGD 353
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLT------------------------------- 212
DV D L+ F P T AKV+ D L
Sbjct: 354 DVDDDKLRAMFSEYGPITS-AKVMRDSLIEGSEEKDEKDKENKKEGETKEEEQNEGSEKK 412
Query: 213 ---------GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
G++KG+GFV F + + +A+TEMN +P+ + A K Q
Sbjct: 413 TEKKGDRKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVRKSQ 469
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N + DE L+ELFS+YG+ + VK+ P GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV F A +A+ +NG + G+ + + + +QA+
Sbjct: 231 KGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAE 275
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 140/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + D+ D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F ++Y T KV+ D TG++KG+GFV F + +A+ EMNG + + + +G A
Sbjct: 211 F-SKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q S N +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQERLSRYQGVN--LYIKNLDDTIDDEKLRKEFSPFGAITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G+ ++VKV+ + TG+ +G+GF+ F A +
Sbjct: 189 EFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKDI-NGKMVF------VGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + + AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGAITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKK 255
++P+ + A K+
Sbjct: 358 VGSKPLYVALAQRKE 372
>gi|327299218|ref|XP_003234302.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
gi|326463196|gb|EGD88649.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
Length = 781
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 142/309 (45%), Gaps = 31/309 (10%)
Query: 53 PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
P+ A A + +G A P Q +L++G+L + E L F+ G+V +++
Sbjct: 32 PSTEAAPETAGEPSGTAAPATSQPHSA---SLYVGELDPSVTEAMLYELFSSIGQVASIR 88
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP 172
V R+ T + GY ++ + + A ER L+ N T + + R+ W+ ++ T
Sbjct: 89 VCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKG--RPCRIMWSQRDPALRK--TG 144
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+F+ +L + + L +TF A + + KV D G +KGYGFV + A
Sbjct: 145 QGNVFIKNLDTAIDNKALHDTF-AAFGNILSCKVAQDEY-GNSKGYGFVHYETAEAATNA 202
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDS 292
+ +NG+ + + + +G KK + + KA++ T ++V N++
Sbjct: 203 IKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANF--------------TNIYVKNVEQ 248
Query: 293 IVTDEHLRELFSQYGQLVHVKIP----AGKR--CGFVQFADRSCAEEALRMLNGTQLGGQ 346
VTDE R LF +YG++ + GK GFV F+D A A+ LN +L GQ
Sbjct: 249 DVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQ 308
Query: 347 NIRLSWGRS 355
+L GR+
Sbjct: 309 --KLYVGRA 315
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 22/264 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 147 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EYGNSKGYGFVHYETAEAATNAIKH 205
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPS 200
NG + + + A K ++ + I+V ++ DVTD + F +Y
Sbjct: 206 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFE-KYGE 264
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--KTVS 258
A + D TG+++G+GFV F D A+ +N + + +G A K +
Sbjct: 265 ITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEE 324
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK----- 313
++QY A + + Q +++ NL + DE LRELFS YG + K
Sbjct: 325 LRKQYEAARIEKASKYQG------VNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMREA 378
Query: 314 ---IPAGKRCGFVQFADRSCAEEA 334
+PA G + AD+ A+EA
Sbjct: 379 IVDVPAETEKG--KEADKEKAKEA 400
>gi|389586343|dbj|GAB69072.1| polyadenylate-binding protein, partial [Plasmodium cynomolgi strain
B]
Length = 883
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 128/264 (48%), Gaps = 27/264 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F G V +++V R+ T + GY ++ + + A AER L T
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + Q RL W+ ++ + IFV +L + + L +TF + + +
Sbjct: 77 LNYTNIKG--QPARLMWSHRDPSLRKSGAGN--IFVKNLDKSIDNKALFDTF-SMFGNIL 131
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KV D G++K YGFV + DE A+ ++NG+ ++ + +G
Sbjct: 132 SCKVATDEF-GKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVG------------H 178
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---GKR 319
+ K S ++ +D T ++V N VT+ HL+ELFS YG++ + + ++
Sbjct: 179 FIKKS------ERATNDTKFTNLYVKNFPDSVTETHLKELFSPYGEITSMIVKTDNKNRK 232
Query: 320 CGFVQFADRSCAEEALRMLNGTQL 343
F+ +AD A+ A+ LNG ++
Sbjct: 233 FCFINYADSESAKNAMENLNGKKI 256
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 26/179 (14%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VGDL DVT+ +L E F +V D +T ++ GY +V + + ++ RA+
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNT-VGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALD 75
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIV 294
+N +P R+ S+++ + +S +FV NLD +
Sbjct: 76 TLNYTNIKGQPARL----------------MWSHRDPSLRKSGA----GNIFVKNLDKSI 115
Query: 295 TDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
++ L + FS +G ++ K+ K GFV + D A+EA+ +NG QLG +N+
Sbjct: 116 DNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNV 174
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKRCG--FVQFADRSCAEEALRM 337
+++VG+L+ VT+ L E+F+ G + +++ K G +V + + + AE AL
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 338 LNGTQLGGQNIRLSWG-RSPS 357
LN T + GQ RL W R PS
Sbjct: 77 LNYTNIKGQPARLMWSHRDPS 97
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++ +L + D L+E F Y + AKV+ D ++KG+GFV F + E +A+T
Sbjct: 450 NLYIKNLDDAIDDQTLKELFEP-YGTITSAKVMRDD-KEQSKGFGFVCFALQEEANKAVT 507
Query: 235 EMNGVFCSTRPMRIGPA 251
EM+ + +P+ +G A
Sbjct: 508 EMHLKIINGKPLYVGLA 524
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 265 KASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-----PAGKR 319
KA + N + +S + +++ NLD + D+ L+ELF YG + K+ K
Sbjct: 432 KAKFDNLNM-ESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKG 490
Query: 320 CGFVQF-----ADRSCAEEALRMLNGTQL 343
GFV F A+++ E L+++NG L
Sbjct: 491 FGFVCFALQEEANKAVTEMHLKIINGKPL 519
>gi|432937502|ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-like [Oryzias latipes]
Length = 629
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 36/290 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVVKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--- 314
+ + T V++ N + DE L+E+F +YG+ + VK+
Sbjct: 180 EAELGAKAKEF--------------TNVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTD 225
Query: 315 PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+GK GFV F A +A+ +NGT+L G+ + + + +QA+
Sbjct: 226 SSGKSRGFGFVSFEKHEDANKAVEEINGTELNGKTVFVGRAQKKMERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 136/290 (46%), Gaps = 24/290 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 144 NGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
NG + N + F + A GA K +++ + ++ D L+E F
Sbjct: 159 NGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDEMEDEQLKEMFE- 212
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+Y T KV+ D +G+++G+GFV F + +A+ E+NG + + + +G A K
Sbjct: 213 KYGKTLSVKVMTDS-SGKSRGFGFVSFEKHEDANKAVEEINGTELNGKTVFVGRAQKKME 271
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 316
+ + + ++++ +++ NLD + DE LR+ FS +G + K+
Sbjct: 272 RQAELKRKFELLKQERISRY----QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 327
Query: 317 ----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 328 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL D+T+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVVKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ N V++ N + DE L+ELFS+YG+ + VK+ P GK
Sbjct: 185 AKAKEFTN--------------VYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV F A +A+ +NG + G+ + + + +QA+
Sbjct: 231 KGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAE 275
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + D+ D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F ++Y T KV+ D TG++KG+GFV F + +A+ EMNG + + + +G A
Sbjct: 211 F-SKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRRFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G+ ++VKV+ + TG+ +G+GF+ F A +
Sbjct: 189 EFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKDI-NGKMVF------VGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKK 255
++P+ + A K+
Sbjct: 358 VGSKPLYVALAQRKE 372
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 140/301 (46%), Gaps = 31/301 (10%)
Query: 61 AAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTG 120
AA +++G P Q +L++G+L + E L F+ G+V +++V R+ T
Sbjct: 40 AAGESSGTTAPATSQPHSA---SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTR 96
Query: 121 QIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGD 180
+ GY ++ + + A ER L+ N T + + R+ W+ ++ T +F+ +
Sbjct: 97 RSLGYAYVNYNNTADGERALEDLNYTLIKG--RPCRIMWSQRDPALRK--TGQGNVFIKN 152
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + + L +TF A + + KV D G +KGYGFV + A+ +NG+
Sbjct: 153 LDTAIDNKALHDTF-AAFGNILSCKVAQDEY-GNSKGYGFVHYETAEAATNAIKHVNGML 210
Query: 241 CSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 300
+ + + +G KK + + KA++ T ++V N++ VTDE R
Sbjct: 211 LNEKKVFVGHHIAKKDRQSKFEEMKANF--------------TNIYVKNVEQDVTDEEFR 256
Query: 301 ELFSQYGQLVHVKIP----AGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354
LF +YG++ + GK GFV F+D A A+ LN +L GQ +L GR
Sbjct: 257 SLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEGLNEYELKGQ--KLYVGR 314
Query: 355 S 355
+
Sbjct: 315 A 315
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 147 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EYGNSKGYGFVHYETAEAATNAIKH 205
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPS 200
NG + + + A K ++ + I+V ++ DVTD + F +Y
Sbjct: 206 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRSLFE-KYGE 264
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--KTVS 258
A + D TG+++G+GFV F D A+ +N + + +G A K +
Sbjct: 265 ITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEGLNEYELKGQKLYVGRAQKKHEREEE 324
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
++QY A + + Q +++ NL + DE LRELFS YG + K+
Sbjct: 325 LRKQYEAARIEKASKYQG------VNLYIKNLSDDIDDEKLRELFSSYGNITSAKV 374
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
T GAK L G++KG+GFV F + E +A+TEMN +P+ + A K Q
Sbjct: 431 TDGAKTEKKHL-GKSKGFGFVCFSNPDEASKAVTEMNQRMVHGKPLYVALAQRKDVRKSQ 489
>gi|242077714|ref|XP_002448793.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
gi|241939976|gb|EES13121.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
Length = 1076
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
++ L++ +L + E L+ F G+V +VKV+R+ TG +GYGF+ + A
Sbjct: 317 DMSKLYVCNLPLLLHEDKLHDLFVPYGQVTSVKVMRDHATGLSKGYGFVRYSDPQHAAHA 376
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGE---KRDDTPDH---------TIFVGDLAADVTD 187
+ NG + + R+ S + DH ++V +L +
Sbjct: 377 IFQLNGHLIEGKKMEVRVAAVSSSGSNTSVQAISETDHQLTKEVDMSNVYVQNLPLLMNT 436
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM- 246
L F Y AKV +D +G +KGYGFV+F D + A+ E+NG R +
Sbjct: 437 DKLLNLFLP-YGKVTSAKVAMDYTSGISKGYGFVKFSDPHDAAHAVIELNGCLVEGRKIL 495
Query: 247 -RIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQ 305
R+ P ++ P S+ N++ + D N ++V N+ S + L ELF
Sbjct: 496 VRVRPPSS----------PVESHANNRTLKEIDMSN---LYVCNIPSSMNKAKLVELFLP 542
Query: 306 YGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 350
+G++ H + + K GFV+FAD CA EA+ M+NG + G+ I +
Sbjct: 543 FGRITHAMVVEQSNNSSKGYGFVKFADSHCAAEAVAMMNGALIEGETISV 592
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 126/288 (43%), Gaps = 14/288 (4%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
+ G L++G+L + L F G +V +V+ + TG +GYGF+++ A
Sbjct: 224 KEGNGTNLFVGNLPPSLASHKLIELFLPFGRIVKSRVVDDCFTGSSKGYGFVQYSDPRYA 283
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
++ NG + RL A K D ++V +L + + L + F
Sbjct: 284 AEAIKHMNGRMVEGRMLEVRLAGAPSSGSTKEMDMSK--LYVCNLPLLLHEDKLHDLF-V 340
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
Y KV+ D TG +KGYGFVR+ D A+ ++NG + M + A +
Sbjct: 341 PYGQVTSVKVMRDHATGLSKGYGFVRYSDPQHAAHAIFQLNGHLIEGKKMEVRVAA--VS 398
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP- 315
SG +A + + D +N V+V NL ++ + L LF YG++ K+
Sbjct: 399 SSGSNTSVQAISETDHQLTKEVDMSN--VYVQNLPLLMNTDKLLNLFLPYGKVTSAKVAM 456
Query: 316 -----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358
K GFV+F+D A A+ LNG + G+ I L R PS+
Sbjct: 457 DYTSGISKGYGFVKFSDPHDAAHAVIELNGCLVEGRKI-LVRVRPPSS 503
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 118/281 (41%), Gaps = 13/281 (4%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
Q + ++ +++ +L M+ L F G+V + KV + +G +GYGF++F
Sbjct: 414 HQLTKEVDMSNVYVQNLPLLMNTDKLLNLFLPYGKVTSAKVAMDYTSGISKGYGFVKFSD 473
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLN-----WASFGAGEKRDDTPDHTIFVGDLAADVTD 187
A + NG + + R+ S + ++V ++ + +
Sbjct: 474 PHDAAHAVIELNGCLVEGRKILVRVRPPSSPVESHANNRTLKEIDMSNLYVCNIPSSMNK 533
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
L E F T +V+++ +KGYGFV+F D A+ MNG +
Sbjct: 534 AKLVELFLPFGRITHA--MVVEQSNNSSKGYGFVKFADSHCAAEAVAMMNGALIEGETIS 591
Query: 248 IGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 307
+ A +S + + + + NN ++V NL ++ + L LF +G
Sbjct: 592 VRVA----GLSPSVSSSVSQHSPHSEINASPEINNCRLYVTNLPQTMSADKLVSLFMPFG 647
Query: 308 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
Q+ V + A FV +AD + A +AL+ ++G + G+ +
Sbjct: 648 QIDRVVMYA--EYSFVLYADINSAAKALKHMDGYLIEGKRL 686
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 15/118 (12%)
Query: 121 QIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGD 180
QI G + ++ AE + TF TP G ++ +++ + ++VG
Sbjct: 775 QIGGSTLVVRVAGLPAESDVATFARTPQTPGNEHRQIDMTN--------------LYVGY 820
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
L VT L E F T+ AKVV+D+ TG +KG+GFVRF D A+T MNG
Sbjct: 821 LPPYVTTDKLIELFLPCGQITQ-AKVVVDKFTGVSKGFGFVRFADAYSAATAITHMNG 877
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 130/324 (40%), Gaps = 52/324 (16%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
++ L++ ++ M++ L F G + V+ +GYGF++F A
Sbjct: 518 DMSNLYVCNIPSSMNKAKLVELFLPFGRITHAMVVEQSNNSS-KGYGFVKFADSHCAAEA 576
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+ NG + + R+ A + + + ++ + L + P
Sbjct: 577 VAMMNGALIEGETISVRV--AGLSPSVSSSVSQHSPHSEINASPEINNCRL---YVTNLP 631
Query: 200 STKGA-KVV--------IDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
T A K+V IDR+ + Y FV + D + +A+ M+G + +
Sbjct: 632 QTMSADKLVSLFMPFGQIDRVVMYAE-YSFVLYADINSAAKALKHMDGYLIEGKRL---- 686
Query: 251 ATNKKTVSGQQQYPKASYQN------SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 304
V G + P + Q+ S++ + D N ++VG + S VT E L ++F
Sbjct: 687 -----VVKGSEPLPANAAQSACSQSGSKLVKEIDMAN---LYVGRVPSAVTCEQLVQIFC 738
Query: 305 QYGQLVHV-KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL------------S 351
YG++V K AG G +++A+ S A A+ L+G Q+GG + + +
Sbjct: 739 LYGEIVQAKKFDAGY--GMIRYANASSAAAAIDHLDGYQIGGSTLVVRVAGLPAESDVAT 796
Query: 352 WGR---SPSNKQAQPDPNQWNAGY 372
+ R +P N+ Q D GY
Sbjct: 797 FARTPQTPGNEHRQIDMTNLYVGY 820
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 23/199 (11%)
Query: 217 GYGFVRFGDESEQLRAMTEMNG--VFCSTRPMRIGPATNKKTVSGQQQYPKA-SYQNSQV 273
GYG +R+ + S A+ ++G + ST +R+ + V+ + P+ ++ Q+
Sbjct: 752 GYGMIRYANASSAAAAIDHLDGYQIGGSTLVVRVAGLPAESDVATFARTPQTPGNEHRQI 811
Query: 274 AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFAD 327
+ T ++VG L VT + L ELF GQ+ K+ K GFV+FAD
Sbjct: 812 -------DMTNLYVGYLPPYVTTDKLIELFLPCGQITQAKVVVDKFTGVSKGFGFVRFAD 864
Query: 328 RSCAEEALRMLNGTQLGGQNIRL-SWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAA 386
A A+ +NG L G + + + G PS D + A +Y Y + A
Sbjct: 865 AYSAATAITHMNGYPLDGHMLAVRTAGVQPS------DMASYMAHFYSYFTSTDPSRMAV 918
Query: 387 AAPQDPSMYYGGYPGYGNY 405
P YY G Y Y
Sbjct: 919 GIPTSDWSYYYGQSAYNPY 937
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 57 ATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
AT A PQ P + + ++ L++G L ++ L F G++ KV+ +
Sbjct: 795 ATFARTPQT------PGNEHRQIDMTNLYVGYLPPYVTTDKLIELFLPCGQITQAKVVVD 848
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPM 148
K TG +G+GF+ F A + NG P+
Sbjct: 849 KFTGVSKGFGFVRFADAYSAATAITHMNGYPL 880
>gi|410263252|gb|JAA19592.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 136/290 (46%), Gaps = 36/290 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--- 314
+ + T V++ N V DE L+ELFSQ+G+ + VK+
Sbjct: 180 EAELGAKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD 225
Query: 315 PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
P GK GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 226 PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 138/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|208431836|ref|NP_001129126.1| polyadenylate-binding protein 4 isoform 3 [Homo sapiens]
gi|332808512|ref|XP_003308043.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730718|ref|XP_003775778.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pongo abelii]
gi|426329064|ref|XP_004025564.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Gorilla
gorilla gorilla]
gi|119627671|gb|EAX07266.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_f [Homo sapiens]
gi|410227602|gb|JAA11020.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 138/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 143/306 (46%), Gaps = 32/306 (10%)
Query: 43 MMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF 102
M Q Q Q P AA P GVA P Q +L++GDL ++++ L F
Sbjct: 1 MAEIQVQHQSP----VSAAPPPNGGVANAPNNANQ-FVTTSLYVGDLDQNVNDSQLYDLF 55
Query: 103 AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF 162
G+VV+V+V R+ T + GYG++ F + A R L N TP+ N ++ R+ ++
Sbjct: 56 NQVGQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALDVLNFTPLNN--RSIRIMYSHR 113
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
++ T + IF+ +L + L +TF + + K+ D +G +KGYGFV+
Sbjct: 114 DPSLRKSGTAN--IFIKNLDKAIDHKALHDTF-SSFGLILSCKIATDA-SGLSKGYGFVQ 169
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNN 282
F +E A+ ++NG+ + + + +G K Q+ + A S NN
Sbjct: 170 FDNEEAAQNAIDKLNGMLINDKQVYVGHFLRK--------------QDRENALSKTKFNN 215
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGK-RC-GFVQFADRSCAEEALRM 337
V+V NL TDE L F +YG + I GK RC GFV F + A +A+
Sbjct: 216 --VYVKNLSESTTDEELMINFGEYGTITSALIMRDADGKSRCFGFVNFENPDDAAKAVEG 273
Query: 338 LNGTQL 343
LNG +
Sbjct: 274 LNGKKF 279
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 138/289 (47%), Gaps = 20/289 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ K I +G +GYGF++F + A+ +
Sbjct: 124 NIFIKNLDKAIDHKALHDTFSSFGLILSCK-IATDASGLSKGYGFVQFDNEEAAQNAIDK 182
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARY 198
NG + N +Q + F + R++ T ++V +L+ TD L F Y
Sbjct: 183 LNGM-LINDKQVY---VGHFLRKQDRENALSKTKFNNVYVKNLSESTTDEELMINF-GEY 237
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ A ++ D G+++ +GFV F + + +A+ +NG + +G A K S
Sbjct: 238 GTITSALIMRDA-DGKSRCFGFVNFENPDDAAKAVEGLNGKKFDDKEWYVGKAQKK---S 293
Query: 259 GQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---P 315
++Q K ++ S +D P +++ NLD ++DE L+E+F+ YG + K+ P
Sbjct: 294 EREQELKGRFEQSIKEAADKYPG-LNLYLKNLDDTISDEKLKEMFADYGTITSCKVMRDP 352
Query: 316 AG--KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
G + GFV F+ A AL +NG G+ + ++ + ++A+
Sbjct: 353 TGISRGSGFVAFSTPEEATRALGEMNGKMFAGKPLYVALAQRKEERRAR 401
>gi|403292062|ref|XP_003937076.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 630
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 138/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|346974495|gb|EGY17947.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 759
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 136/277 (49%), Gaps = 25/277 (9%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
QP +L++G+L+ + E L F+H G V +++V R+ T + GY ++ + + +
Sbjct: 56 QPQASASLYVGELEPQVTEAMLFELFSHIGPVASIRVCRDAVTRRSLGYAYVNYNTTSDG 115
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
E+ L+ N T + NG + R+ W+ +++ + +F+ +L + + L +TF A
Sbjct: 116 EKALEELNYTVI-NG-RPCRIMWSQRDPALRKNGQGN--VFIKNLDVAIDNKALHDTF-A 170
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+ + KV D G +KGYGFV + + +A+ +NG+ + + + +G KK
Sbjct: 171 AFGNILSCKVAQDE-HGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKD 229
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP- 315
+ + KA++ T V+V N++S +D+ R+LF++YG++ +
Sbjct: 230 RQSKFEEMKANF--------------TNVYVKNINSEASDDEFRDLFTKYGEVTSSSLAR 275
Query: 316 ----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 348
+ GFV F A +A+ LNG GQ++
Sbjct: 276 DQEGKSRGFGFVNFTTHEAASQAVEELNGKDFRGQDL 312
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 114/245 (46%), Gaps = 31/245 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV +++ G +GYGF+ + + A + ++
Sbjct: 150 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDEH-GNSKGYGFVHYETDEAAAQAIKH 208
Query: 143 FNG-------------TPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
NG P + + F A+F ++V ++ ++ +D
Sbjct: 209 VNGMLLNEKKVYVGHHIPKKDRQSKFEEMKANF-----------TNVYVKNINSEASDDE 257
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
++ F +Y + + D+ G+++G+GFV F +A+ E+NG + + +G
Sbjct: 258 FRDLF-TKYGEVTSSSLARDQ-EGKSRGFGFVNFTTHEAASQAVEELNGKDFRGQDLYVG 315
Query: 250 PATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 309
A K +++ + SY+ ++ ++ + +++ NL V DE LR +FS++G +
Sbjct: 316 RAQKKHE---REEELRKSYEAARQEKA-NKYQGVNLYIKNLSDDVDDEKLRAMFSEFGPI 371
Query: 310 VHVKI 314
K+
Sbjct: 372 TSAKV 376
>gi|119627673|gb|EAX07268.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_h [Homo sapiens]
Length = 661
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 139/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|410263248|gb|JAA19590.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410263254|gb|JAA19593.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 139/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|403292058|ref|XP_003937074.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 659
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 139/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|227206148|dbj|BAH57129.1| AT4G27000 [Arabidopsis thaliana]
Length = 88
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 59/72 (81%)
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
ML ETF+A Y S KGAKVV DR TGR+KGYGFVRF DES Q+RAMTEMNG +CS+RPMR
Sbjct: 1 MLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESGQIRAMTEMNGQYCSSRPMRT 60
Query: 249 GPATNKKTVSGQ 260
GPA NKK ++ Q
Sbjct: 61 GPAANKKPLTMQ 72
>gi|410263250|gb|JAA19591.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 644
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 139/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|208431833|ref|NP_001129125.1| polyadenylate-binding protein 4 isoform 1 [Homo sapiens]
gi|332808508|ref|XP_513344.3| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pan
troglodytes]
gi|395730714|ref|XP_002811047.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pongo abelii]
gi|397488842|ref|XP_003815452.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pan paniscus]
gi|426329062|ref|XP_004025563.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Gorilla
gorilla gorilla]
gi|66267552|gb|AAH94755.1| PABPC4 protein [Homo sapiens]
gi|119627668|gb|EAX07263.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_c [Homo sapiens]
gi|410227598|gb|JAA11018.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410227604|gb|JAA11021.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ N V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 185 AKAKEFTN--------------VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 138/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|119627667|gb|EAX07262.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_b [Homo sapiens]
Length = 645
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 139/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 145/322 (45%), Gaps = 32/322 (9%)
Query: 46 PQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHT 105
P P AQ AP A VA Q P +L+ GDL + E +L F H
Sbjct: 19 PSPTAQTSVQVPVSIPAPSPAAVA----DQTHPNS--SLYAGDLDPKVTEAHLFDLFKHV 72
Query: 106 GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAG 165
VV+V+V R++ + GY +I F + A R ++ N TP+ E+ R+ ++
Sbjct: 73 ANVVSVRVCRDQNRRSL-GYAYINFSNPNDAYRAMEALNYTPL--FERPIRIMLSNRDPS 129
Query: 166 EKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
+ + IF+ +L A + + L ETF + + + KV +D +TGR+KGYGFV+F
Sbjct: 130 TRLSGKGN--IFIKNLDASIDNKALFETFSS-FGTILSCKVAMD-VTGRSKGYGFVQFEK 185
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTV 285
E A+ ++NG+ + + + +G ++ + + P P T V
Sbjct: 186 EESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPT--------------PRFTNV 231
Query: 286 FVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKRC-GFVQFADRSCAEEALRMLNG 340
+V NL + ++ LR+ F ++G + + RC GFV F A A+ +NG
Sbjct: 232 YVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNG 291
Query: 341 TQLGGQNIRLSWGRSPSNKQAQ 362
LG + + + S ++ +
Sbjct: 292 ISLGDDVLYVGRAQKKSEREEE 313
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 143/288 (49%), Gaps = 18/288 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV + TG+ +GYGF++F A+ +
Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKL 196
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPD---HTIFVGDLAADVTDYMLQETFRARYPS 200
NG M N +Q F ++ + ++TP ++V +L ++ + L++TF ++
Sbjct: 197 NGMLM-NDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTF-GKFGV 254
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A V+ D+ +G ++ +GFV F A+ +MNG+ + +G A K S +
Sbjct: 255 ISSAVVMRDQ-SGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKK---SER 310
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG 317
++ + ++ ++ + + +++ NLD V DE L+E+FS+YG + K+ P G
Sbjct: 311 EEELRRKFEQERINRFEKS-QGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQG 369
Query: 318 KRCGFVQFADRSCAEEALRML---NGTQLGGQNIRLSWGRSPSNKQAQ 362
GF F S EEALR L NG +G + + ++ + +++A
Sbjct: 370 LSRGF-GFVAYSNPEEALRALSEMNGKMIGKKPLYIALAQRKEDRRAH 416
>gi|325303220|tpg|DAA34696.1| TPA_inf: apoptosis-promoting RNA-binding protein TIA-1/TIAR
[Amblyomma variegatum]
Length = 374
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 123/265 (46%), Gaps = 13/265 (4%)
Query: 106 GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF-GA 164
G+V K+I + Y F+EF A L N E ++NWA+ G
Sbjct: 2 GQVKGCKIIHEPGN---DPYCFVEFSDHQSAASALLAMNKRLCFGKE--MKVNWATSPGN 56
Query: 165 GEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
K D + H IFVGDL+ ++ L++ F A + +VV D T ++KGYGFV F
Sbjct: 57 TPKLDTSKHHHIFVGDLSPEIETTQLRDAF-APFGDISDCRVVRDPQTLKSKGYGFVSFV 115
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSD----DDP 280
+++ A+ MNG + +R +R AT K + Q + + + P
Sbjct: 116 KKADAENAIGTMNGQWLGSRAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQSSP 175
Query: 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 340
N TV+ G + +++E +++ FS YG + +++ K F++ + A A+ +
Sbjct: 176 TNCTVYCGGITQGLSEELMQKTFSSYGAIQEIRVFKDKGYAFIKVGTKEAATHAIVATHN 235
Query: 341 TQLGGQNIRLSWGRSPS--NKQAQP 363
+ + GQ ++ SWG+ + N Q QP
Sbjct: 236 SDVNGQTVKCSWGKEATDPNNQQQP 260
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 38/188 (20%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL ++ T L FA G++ +V+R+ QT + +GYGF+ F+ +A AE + T
Sbjct: 68 IFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTM 127
Query: 144 NGTPMPNGEQNFRLNWA----------------------SFGAGEKRDDTPDHTIFVGDL 181
NG + G + R NWA +F + + T++ G +
Sbjct: 128 NGQWL--GSRAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQSSPTNCTVYCGGI 185
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM-----TEM 236
+++ ++Q+TF + Y + + +V D KGY F++ G + A+ +++
Sbjct: 186 TQGLSEELMQKTF-SSYGAIQEIRVFKD------KGYAFIKVGTKEAATHAIVATHNSDV 238
Query: 237 NG--VFCS 242
NG V CS
Sbjct: 239 NGQTVKCS 246
>gi|48734702|gb|AAH71591.1| PABPC4 protein [Homo sapiens]
Length = 660
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 139/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|4504715|ref|NP_003810.1| polyadenylate-binding protein 4 isoform 2 [Homo sapiens]
gi|332808510|ref|XP_003308042.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730716|ref|XP_003775777.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pongo abelii]
gi|397488844|ref|XP_003815453.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pan paniscus]
gi|426329066|ref|XP_004025565.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Gorilla
gorilla gorilla]
gi|12229875|sp|Q13310.1|PABP4_HUMAN RecName: Full=Polyadenylate-binding protein 4; Short=PABP-4;
Short=Poly(A)-binding protein 4; AltName:
Full=Activated-platelet protein 1; Short=APP-1; AltName:
Full=Inducible poly(A)-binding protein; Short=iPABP
gi|1163177|gb|AAC50350.1| inducible poly(A)-binding protein [Homo sapiens]
gi|2801403|gb|AAB97309.1| polyadenylate binding protein [Homo sapiens]
gi|119627669|gb|EAX07264.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_d [Homo sapiens]
gi|410227600|gb|JAA11019.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|1585757|prf||2201474A inducible poly(A)-binding protein
Length = 644
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 139/292 (47%), Gaps = 22/292 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A +
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA--Q 267
Query: 255 KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 314
K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K+
Sbjct: 268 KKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Query: 315 PA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|119627670|gb|EAX07265.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_e [Homo sapiens]
Length = 615
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 136/290 (46%), Gaps = 36/290 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--- 314
+ + T V++ N V DE L+ELFSQ+G+ + VK+
Sbjct: 180 EAELGAKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD 225
Query: 315 PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
P GK GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 226 PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 138/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|395526571|ref|XP_003765434.1| PREDICTED: polyadenylate-binding protein 4 [Sarcophilus harrisii]
Length = 630
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA- 316
+ + N V++ N + DE L+ELFS+YG+ + VK+
Sbjct: 180 EAELGAKAKEFTN--------------VYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD 225
Query: 317 ----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F A +A+ +NG + G+ + + + +QA+
Sbjct: 226 SSGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAE 275
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 139/290 (47%), Gaps = 24/290 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 144 NGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
NG + N + F + A GA K +++ + D+ D L+E F +
Sbjct: 159 NGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKELF-S 212
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+Y T KV+ D +G++KG+GFV F + +A+ EMNG + + + +G A +K
Sbjct: 213 KYGKTLSVKVMTDS-SGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRA--QKK 269
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 316
V Q + + Q Q S N +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVN--LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 327
Query: 317 ----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 328 EDGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G+ ++VKV+ + +G+ +G+GF+ F A +
Sbjct: 189 EFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-SSGKSKGFGFVSFEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKDI-NGKMVF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPDEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKK 255
++P+ + A K+
Sbjct: 358 VGSKPLYVALAQRKE 372
>gi|156360993|ref|XP_001625306.1| predicted protein [Nematostella vectensis]
gi|156212133|gb|EDO33206.1| predicted protein [Nematostella vectensis]
Length = 584
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 141/284 (49%), Gaps = 35/284 (12%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
I +L++GDL + E L F+ G V++++V R+ T + GY ++ F AE+ L
Sbjct: 12 IASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEKAL 71
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRA 196
T N P+ + R+ W ++RD + + IF+ +L + + L +TF A
Sbjct: 72 DTMNFDPIKG--RPCRIMW------QQRDPSLRKSGVGNIFIKNLDKSIDNKSLYDTFSA 123
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+ + K+ D L G KGYGFV F E L A+ ++G+ + + + +G +KK
Sbjct: 124 -FGNILSCKIAQDEL-GNPKGYGFVHFETEDAALEAIARVDGMLLNDKKVFVGRWMSKK- 180
Query: 257 VSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-- 314
++ K Q + T V+V N + DE ++E+ ++ G++V +K+
Sbjct: 181 ----ERIEKMGTQPKKF---------TNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMT 227
Query: 315 -PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355
P GK GFV F AEEA+ +LNG ++GG+ RL GR+
Sbjct: 228 DPEGKSKGFGFVSFETPEEAEEAVNVLNGKEIGGR--RLWAGRA 269
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 132/294 (44%), Gaps = 24/294 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ K+ ++ + G +GYGF+ F + A +
Sbjct: 100 VGNIFIKNLDKSIDNKSLYDTFSAFGNILSCKIAQD-ELGNPKGYGFVHFETEDAALEAI 158
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAG-EKRDDTPDH--TIFVGDLAADVTDYMLQETFRAR 197
+G + N ++ F W S EK P ++V + D+ D ++E A
Sbjct: 159 ARVDGMLL-NDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEIC-AE 216
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
KV+ D G++KG+GFV F E A+ +NG R + G A
Sbjct: 217 AGKIVSLKVMTDP-EGKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGRA------ 269
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+++ +A+ +++ + + N +++ NLD + DE LRE FS YG + K
Sbjct: 270 --KKRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDDPIDDERLREEFSPYGTISSAK 327
Query: 314 IPA-----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG L + + ++ + ++AQ
Sbjct: 328 VMKDDKGNSKGFGFVCFSSPEEATKAVTEMNGRILISKPLYVALAQRREERKAQ 381
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 15/196 (7%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
QP + +++ + MD+ + A G++V++KV+ + + G+ +G+GF+ F + A
Sbjct: 189 QPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPE-GKSKGFGFVSFETPEEA 247
Query: 137 ERVLQTFNGTPMPN-----GEQNFRLNWASFGAGE---KRDDTPDH----TIFVGDLAAD 184
E + NG + G R A+ E KR + + +++ +L
Sbjct: 248 EEAVNVLNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDDP 307
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+ D L+E F + Y + AKV+ D G +KG+GFV F E +A+TEMNG ++
Sbjct: 308 IDDERLREEF-SPYGTISSAKVMKDD-KGNSKGFGFVCFSSPEEATKAVTEMNGRILISK 365
Query: 245 PMRIGPATNKKTVSGQ 260
P+ + A ++ Q
Sbjct: 366 PLYVALAQRREERKAQ 381
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 88/194 (45%), Gaps = 28/194 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDLA DVT+ ML E F + S +V D +T R+ GY +V F +
Sbjct: 11 PIASLYVGDLAPDVTEAMLYEKF-STAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEK 69
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN RP RI QQ+ P S + S V +F+ NLD
Sbjct: 70 ALDTMNFDPIKGRPCRI---------MWQQRDP--SLRKSGVG---------NIFIKNLD 109
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPAG-----KRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
+ ++ L + FS +G ++ KI K GFV F A EA+ ++G L +
Sbjct: 110 KSIDNKSLYDTFSAFGNILSCKIAQDELGNPKGYGFVHFETEDAALEAIARVDGMLLNDK 169
Query: 347 NIRLSWGRSPSNKQ 360
+ + GR S K+
Sbjct: 170 KVFV--GRWMSKKE 181
>gi|449547299|gb|EMD38267.1| hypothetical protein CERSUDRAFT_113433 [Ceriporiopsis subvermispora
B]
Length = 679
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 134/284 (47%), Gaps = 25/284 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
L++G+L + E L F G V +++V R+ T + GY ++ +++ A ER L+
Sbjct: 50 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQL 109
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKG 203
N + + + R+ W+ ++ T IF+ +L + + L +TF A + +
Sbjct: 110 NYSLIKG--RACRIMWSQRDPALRK--TGQGNIFIKNLDEGIDNKALHDTF-AAFGNVLS 164
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQY 263
KV D GR+KGYGFV + A+ +NG+ + + + +GP ++K + +
Sbjct: 165 CKVATDE-HGRSKGYGFVHYETAEAADTAIKAVNGMLLNDKKVYVGPHISRKERQSKIEE 223
Query: 264 PKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGK 318
KA + T V+V N+D+ VTDE R+LF Q+G + I K
Sbjct: 224 MKAQF--------------TNVYVKNIDAEVTDEEFRQLFEQFGNVTSAVIQRDEEGRSK 269
Query: 319 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV F A++ + L+ +L G+ + ++ + + ++ +
Sbjct: 270 GFGFVNFEKHEEAQKGVESLHDFELNGKKLFVTRAQKKAEREEE 313
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 131/278 (47%), Gaps = 14/278 (5%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G V++ KV ++ G+ +GYGF+ + + A+ ++
Sbjct: 137 NIFIKNLDEGIDNKALHDTFAAFGNVLSCKVATDEH-GRSKGYGFVHYETAEAADTAIKA 195
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPS 200
NG + + + + + K ++ ++V ++ A+VTD ++ F ++ +
Sbjct: 196 VNGMLLNDKKVYVGPHISRKERQSKIEEMKAQFTNVYVKNIDAEVTDEEFRQLFE-QFGN 254
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
A + D GR+KG+GFV F E + + ++ + + + + A K + +
Sbjct: 255 VTSAVIQRDE-EGRSKGFGFVNFEKHEEAQKGVESLHDFELNGKKLFVTRAQKK---AER 310
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP----- 315
++ + SY+ ++ + +++ NL+ V DE LR+ F +G + K+
Sbjct: 311 EEELRKSYEQAK-NEKLSKYQGVNLYIKNLEDEVDDERLRQEFEPFGTITSAKVMRDEKG 369
Query: 316 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353
+ K GFV F+ A +A+ +N +G + + +S
Sbjct: 370 SSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLA 407
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ ++ + + F G V + VI+ + G+ +G+GF+ F A++ +++
Sbjct: 230 NVYVKNIDAEVTDEEFRQLFEQFGNVTSA-VIQRDEEGRSKGFGFVNFEKHEEAQKGVES 288
Query: 143 F-----NGTPM--------PNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
NG + E+ R ++ EK +++ +L +V D
Sbjct: 289 LHDFELNGKKLFVTRAQKKAEREEELRKSYEQ-AKNEKLSKYQGVNLYIKNLEDEVDDER 347
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L++ F + + AKV+ D G +KG+GFV F E +A+ EMN T+P+ +
Sbjct: 348 LRQEFEP-FGTITSAKVMRDE-KGSSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVS 405
Query: 250 PATNKKTVSGQQQYPKASYQNSQVAQSD 277
A ++ Q + SQ+AQ +
Sbjct: 406 LAQRREVRRQQLE--------SQIAQRN 425
>gi|403292060|ref|XP_003937075.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 643
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K +
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 YPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 319
+ T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 185 AKAKEF--------------TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
Query: 320 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 138/293 (47%), Gaps = 24/293 (8%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA-- 266
Query: 254 KKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+K V Q + + Q Q + +++ NLD + DE LR+ FS +G + K
Sbjct: 267 QKKVERQAELKRKFEQLKQ--ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Query: 314 IPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
+ K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 325 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLD 291
A+ MN +P+RI Q+ P S + S V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRI---------MWSQRDP--SLRKSGVG---------NVFIKNLD 107
Query: 292 SIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L +
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167
Query: 348 IRLSWGRSPSNKQAQ 362
+ + +S ++A+
Sbjct: 168 VFVGRFKSRKEREAE 182
>gi|403213707|emb|CCK68209.1| hypothetical protein KNAG_0A05440 [Kazachstania naganishii CBS
8797]
Length = 442
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 101/187 (54%), Gaps = 7/187 (3%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
G+ R L++G+L + E L F G++V VKV+ +K++ + Y F+E+
Sbjct: 73 GRETSDRVLYVGNLDKSITEDILKQYFQVAGQIVDVKVMIDKKSNYV-NYAFVEYAKAHD 131
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFR 195
A LQT NG + N + ++N A F + + D +FVGDL D+ D L +F+
Sbjct: 132 ASVALQTLNGIQIENNK--VKINRA-FQSQQSTTDDSTFNLFVGDLNIDIDDDTLSRSFK 188
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
+PS A V+ D TGR++GYGFV F D+ + +AM EM G + RP+RI AT +
Sbjct: 189 -DFPSYIQAHVMWDMQTGRSRGYGFVSFADQEQAQKAMEEMQGKELNGRPIRINWATKRD 247
Query: 256 TVSGQQQ 262
+ QQQ
Sbjct: 248 --NNQQQ 252
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 27/199 (13%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
+T D ++VG+L +T+ +L++ F+ KV+ID+ + Y FV + +
Sbjct: 75 ETSDRVLYVGNLDKSITEDILKQYFQVA-GQIVDVKVMIDKKSNYV-NYAFVEYAKAHDA 132
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGN 289
A+ +NG+ ++I A Q QS D + +FVG+
Sbjct: 133 SVALQTLNGIQIENNKVKINRAF-------------------QSQQSTTDDSTFNLFVGD 173
Query: 290 LDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQL 343
L+ + D+ L F + + + + GFV FAD+ A++A+ + G +L
Sbjct: 174 LNIDIDDDTLSRSFKDFPSYIQAHVMWDMQTGRSRGYGFVSFADQEQAQKAMEEMQGKEL 233
Query: 344 GGQNIRLSWGRSPSNKQAQ 362
G+ IR++W N Q Q
Sbjct: 234 NGRPIRINWATKRDNNQQQ 252
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
A QQ L++GDL +D+ L+ F + V+ + QTG+ GYGF+
Sbjct: 154 AFQSQQSTTDDSTFNLFVGDLNIDIDDDTLSRSFKDFPSYIQAHVMWDMQTGRSRGYGFV 213
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD 170
F + A++ ++ G + NG + R+NWA+ KRD+
Sbjct: 214 SFADQEQAQKAMEEMQGKEL-NG-RPIRINWAT-----KRDN 248
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 33/75 (44%)
Query: 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 339
P +T ++GN+ T+ L L +G ++ K C F+++ A + L
Sbjct: 336 PRVSTAYIGNIPHFATEADLIPLLQSFGFILDFTHYPEKGCCFIKYDTHEQAAVCIVALA 395
Query: 340 GTQLGGQNIRLSWGR 354
G+N+R WG+
Sbjct: 396 NFNFQGRNLRTGWGK 410
>gi|218192545|gb|EEC74972.1| hypothetical protein OsI_11001 [Oryza sativa Indica Group]
Length = 647
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 146/319 (45%), Gaps = 31/319 (9%)
Query: 49 QAQPPAMWATQAAAPQAAGV-AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
Q M A A AP A V AVP G + L++GDL + E +L F G
Sbjct: 4 QEMEVMMVAMAAEAPVAVEVEAVPAAAGGLNATVPALYVGDLHESVREEHLLEVFGKIGT 63
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK 167
+ +V+V R+ T YG++ ++S+A A L+ N + + ++ R+ W++ +
Sbjct: 64 LTSVRVCRDNATSNSLRYGYVNYLSQADAAIALEKLNHSLIL--DKPIRVMWSNRDPDAR 121
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG-DE 226
R + +FV +L V + LQE F ++ KV + G ++GYGFV+F E
Sbjct: 122 RSGVGN--VFVKNLNDLVDNVSLQELF-CKFGDILSCKVAKNE-DGTSRGYGFVQFALQE 177
Query: 227 SEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVF 286
S N FC G+Q + + S+ + ++DD T ++
Sbjct: 178 SADASIQNLNNSHFC-----------------GRQLHVATFIKKSERSTNNDDK-YTNLY 219
Query: 287 VGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGT 341
+ NLD +T+E ++ FSQYG ++ VKI K GFV F + A+ A +NG
Sbjct: 220 MKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQNPESAKRAKESMNGM 279
Query: 342 QLGGQNIRLSWGRSPSNKQ 360
LG + + ++ + + ++
Sbjct: 280 LLGSKTLYVARAQKKAERK 298
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 135/288 (46%), Gaps = 19/288 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ +L +D L F G++++ KV +N + G GYGF++F + A+ +Q
Sbjct: 127 NVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKN-EDGTSRGYGFVQFALQESADASIQN 185
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH---TIFVGDLAADVTDYMLQETFRARYP 199
N + G Q L+ A+F +R D +++ +L D+T+ +++ F ++Y
Sbjct: 186 LNNSHFC-GRQ---LHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEELIKLKF-SQYG 240
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
K+ + R G +KG+GFV F + RA MNG+ ++ + + A K
Sbjct: 241 LVISVKI-MKRDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVARAQKKAERKQ 299
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---- 315
Q +N + +S N + V++ N++ V D+ LRE F+++G + KI
Sbjct: 300 YLQCLHEEKRNEIITKS----NGSNVYIKNINDEVGDDALRERFNEFGNITSAKIMRDEK 355
Query: 316 -AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV + A+ A+ + G G+ + ++ + ++A+
Sbjct: 356 GISKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYVAIAQRKEERRAK 403
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 149/288 (51%), Gaps = 20/288 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ F+ G +V+ KV + +GQ +GYGF+++ + A++ ++
Sbjct: 126 IFIKNLDESIDHKALHDTFSVFGNIVSCKVAVDS-SGQSKGYGFVQYANEESAQKAIEKL 184
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARYP 199
NG + N +Q + F ++RD T + T ++V +LA TD L+ F Y
Sbjct: 185 NGMLL-NDKQVY---VGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAF-GEYG 239
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
A V+ D G++KG+GFV F + + RA+ +NG + +G A K S
Sbjct: 240 KITSAVVMKDG-DGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKK---SE 295
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PA 316
++ + Y+ + + ++ D ++ ++V NLD ++DE L+E+FS +G + K+ P
Sbjct: 296 RETELRVRYEQN-LKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDPN 354
Query: 317 G--KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
G K GFV F+ A EA+ L+G + + + ++ + +++AQ
Sbjct: 355 GTSKGSGFVAFSTPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRAQ 402
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 129/269 (47%), Gaps = 33/269 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + ++ L F+ G VV+V+V R+ T + GYG++ F + A R +Q
Sbjct: 37 SLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQE 96
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N P+ + R+ ++ +R + IF+ +L + L +TF + +
Sbjct: 97 LNYIPLYG--KPIRVMYSHRDPSVRRSGAGN--IFIKNLDESIDHKALHDTFSV-FGNIV 151
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQ 262
KV +D +G++KGYGFV++ +E +A+ ++NG+ + + + +GP ++
Sbjct: 152 SCKVAVDS-SGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQ------- 203
Query: 263 YPKASYQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPA 316
+ D N T V+V NL TD+ L+ F +YG++ V +K
Sbjct: 204 ------------ERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGD 251
Query: 317 GKR--CGFVQFADRSCAEEALRMLNGTQL 343
GK GFV F + A A+ LNG +
Sbjct: 252 GKSKGFGFVNFENADDAARAVESLNGHKF 280
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGKRC---GFVQFADRSCAEEALR 336
T+++VG+LD VTD L + FSQ G +V V++ A +R G+V F + A A++
Sbjct: 36 TSLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQ 95
Query: 337 MLNGTQLGGQNIRLSWG-RSPSNKQA 361
LN L G+ IR+ + R PS +++
Sbjct: 96 ELNYIPLYGKPIRVMYSHRDPSVRRS 121
>gi|115452253|ref|NP_001049727.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|108707490|gb|ABF95285.1| polyadenylate binding protein, types 1, 2, 3, 4 family protein,
expressed [Oryza sativa Japonica Group]
gi|113548198|dbj|BAF11641.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|215678518|dbj|BAG92173.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624669|gb|EEE58801.1| hypothetical protein OsJ_10348 [Oryza sativa Japonica Group]
Length = 647
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 146/319 (45%), Gaps = 31/319 (9%)
Query: 49 QAQPPAMWATQAAAPQAAGV-AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
Q M A A AP A V AVP G + L++GDL + E +L F G
Sbjct: 4 QEMEVMMVAMAAEAPVAVEVEAVPAVAGGLNATVPALYVGDLHESVREEHLLEVFGKIGT 63
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK 167
+ +V+V R+ T YG++ ++S+A A L+ N + + ++ R+ W++ +
Sbjct: 64 LTSVRVCRDNATSNSLRYGYVNYLSQADAAIALEKLNHSLIL--DKPIRVMWSNRDPDAR 121
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG-DE 226
R + +FV +L V + LQE F ++ KV + G ++GYGFV+F E
Sbjct: 122 RSGVGN--VFVKNLNDLVDNVSLQELF-CKFGDILSCKVAKNE-DGTSRGYGFVQFALQE 177
Query: 227 SEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVF 286
S N FC G+Q + + S+ + ++DD T ++
Sbjct: 178 SADASIQNLNNSHFC-----------------GRQLHVATFIKKSERSTNNDDK-YTNLY 219
Query: 287 VGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGT 341
+ NLD +T+E ++ FSQYG ++ VKI K GFV F + A+ A +NG
Sbjct: 220 MKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQNPESAKRAKESMNGM 279
Query: 342 QLGGQNIRLSWGRSPSNKQ 360
LG + + ++ + + ++
Sbjct: 280 LLGSKTLYVARAQKKAERK 298
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 135/288 (46%), Gaps = 19/288 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ +L +D L F G++++ KV +N + G GYGF++F + A+ +Q
Sbjct: 127 NVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKN-EDGTSRGYGFVQFALQESADASIQN 185
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH---TIFVGDLAADVTDYMLQETFRARYP 199
N + G Q L+ A+F +R D +++ +L D+T+ +++ F ++Y
Sbjct: 186 LNNSHFC-GRQ---LHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEELIKLKF-SQYG 240
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSG 259
K+ + R G +KG+GFV F + RA MNG+ ++ + + A K
Sbjct: 241 LVISVKI-MKRDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVARAQKKAERKQ 299
Query: 260 QQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---- 315
Q +N + +S N + V++ N++ V D+ LRE F+++G + KI
Sbjct: 300 YLQRLHEEKRNEIITKS----NGSNVYIKNINDEVGDDALRERFNEFGNITSAKIMRDEK 355
Query: 316 -AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV + A+ A+ + G G+ + ++ + ++A+
Sbjct: 356 GISKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYVAIAQRKEERRAK 403
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 26/271 (9%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
I +L++GDL + E L F+ G +V+++V R+ T + GY ++ F A AER L
Sbjct: 10 IASLYVGDLHQDVTEAMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
T N + Q R+ W+ ++ + IF+ +L + + L +TF A + +
Sbjct: 70 DTMNFDVIKG--QPVRIMWSQRDPSLRKSGVGN--IFIKNLDKSIDNKALYDTFSA-FGN 124
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
KVV D ++GYGFV F RA+ +MNG+ + R + +G ++K +
Sbjct: 125 ILSCKVVCDE--NGSRGYGFVHFETHDAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 261 QQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---- 316
+ N V++ N + DE L+E+FS++G V++
Sbjct: 183 LGARAREFTN--------------VYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTDESG 228
Query: 317 -GKRCGFVQFADRSCAEEALRMLNGTQLGGQ 346
G+ GFV F + A++A+ +NG +L G+
Sbjct: 229 GGRGFGFVSFENHEDAQKAVDEMNGKELNGR 259
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 138/289 (47%), Gaps = 22/289 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GYGF+ F + AER ++
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSR--GYGFVHFETHDAAERAIEKM 158
Query: 144 NGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG + + + ++ + A GA R+ T +++ + D+ D L+E F ++
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGA-RAREFT---NVYIKNFGEDMDDEKLKEIF-SK 213
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + +V+ D +G +G+GFV F + + +A+ EMNG + R M +G A +K +
Sbjct: 214 FGNATSVRVMTDE-SGGGRGFGFVSFENHEDAQKAVDEMNGKELNGRIMFVGRA--QKKM 270
Query: 258 SGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA- 316
Q + + Q Q ++V NLD + DE LR+ FS +G + K+
Sbjct: 271 ERQMELKRRFEQMKQ--DRTTRYQGVNLYVKNLDDGIDDERLRKEFSPFGSITSAKVMME 328
Query: 317 ---GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 362
K GFV F+ A +A+ +NG + + + ++ + +QA
Sbjct: 329 GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAH 377
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 33/199 (16%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVI----DRLTGRTKGYGFVRFGDES 227
P +++VGDL DVT+ ML E F S GA V I D +T R+ GY +V F +
Sbjct: 9 PIASLYVGDLHQDVTEAMLYEKF-----SPAGAIVSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFV 287
+ RA+ MN +P+RI Q+ P S + S V +F+
Sbjct: 64 DAERALDTMNFDVIKGQPVRI---------MWSQRDP--SLRKSGVG---------NIFI 103
Query: 288 GNLDSIVTDEHLRELFSQYGQLVHVKIPA---GKR-CGFVQFADRSCAEEALRMLNGTQL 343
NLD + ++ L + FS +G ++ K+ G R GFV F AE A+ +NG L
Sbjct: 104 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETHDAAERAIEKMNGMLL 163
Query: 344 GGQNIRLSWGRSPSNKQAQ 362
+ + + +S ++A+
Sbjct: 164 NDRKVFVGRFKSRKEREAE 182
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G +V+V+ + ++G G+GF+ F + A++
Sbjct: 189 EFTNVYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTD-ESGGGRGFGFVSFENHEDAQKA 247
Query: 140 LQTFNGTPMPNGEQNF----------RLNWASFGAGEKRDDTPDH---TIFVGDLAADVT 186
+ NG + NG F ++ K+D T + ++V +L +
Sbjct: 248 VDEMNGKEL-NGRIMFVGRAQKKMERQMELKRRFEQMKQDRTTRYQGVNLYVKNLDDGID 306
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG +T+P+
Sbjct: 307 DERLRKEF-SPFGSITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
Query: 247 RIGPATNKK 255
+ A K+
Sbjct: 364 YVALAQRKE 372
>gi|70990636|ref|XP_750167.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|74669855|sp|Q4WK03.1|PABP_ASPFU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|66847799|gb|EAL88129.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|159130644|gb|EDP55757.1| polyadenylate-binding protein [Aspergillus fumigatus A1163]
Length = 753
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 144/308 (46%), Gaps = 34/308 (11%)
Query: 53 PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
P + A ++A+P A P +L++G+L + E L F+ G+V +++
Sbjct: 30 PEVTAVESASPSTTPSASQPHSA-------SLYVGELDPSVTEAMLYELFSSIGQVASIR 82
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP 172
V R+ T + GY ++ + + A ER L+ N T + + R+ W+ ++ T
Sbjct: 83 VCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKG--KPCRIMWSQRDPALRK--TG 138
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+F+ +L A + + L +TF A + + KV D G +KGYGFV + A
Sbjct: 139 QGNVFIKNLDAAIDNKALHDTF-AAFGNILSCKVAQDEF-GNSKGYGFVHYETAEAANNA 196
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDS 292
+ +NG+ + + + +G +KK + + KA++ N V++ N+D
Sbjct: 197 IKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTN--------------VYIKNIDQ 242
Query: 293 IVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQN 347
VTDE R++F ++G++ + + GFV F+ A+ A+ +N ++ GQ
Sbjct: 243 EVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQ- 301
Query: 348 IRLSWGRS 355
+L GR+
Sbjct: 302 -KLYVGRA 308
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 25/241 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 142 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHV 200
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--------TIFVGDLAADVTDYMLQETFR 195
NG + N ++ F + S K+D +++ ++ +VTD ++ F
Sbjct: 201 NGMLL-NDKKVFVGHHIS-----KKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFE 254
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK- 254
++ A + D+ G+++G+GFV F A+ EMN + + +G A K
Sbjct: 255 -KFGEITSATLSRDQ-EGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKH 312
Query: 255 -KTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 313
+ ++QY A + + Q ++V NL V DE LRELFS +G + K
Sbjct: 313 EREEELRKQYEAARLEKASKYQG------VNLYVKNLTDDVDDEKLRELFSPFGTITSAK 366
Query: 314 I 314
+
Sbjct: 367 V 367
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,819,165,037
Number of Sequences: 23463169
Number of extensions: 373945167
Number of successful extensions: 3657927
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13888
Number of HSP's successfully gapped in prelim test: 30570
Number of HSP's that attempted gapping in prelim test: 2905822
Number of HSP's gapped (non-prelim): 468489
length of query: 413
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 268
effective length of database: 8,957,035,862
effective search space: 2400485611016
effective search space used: 2400485611016
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)