Query 015091
Match_columns 413
No_of_seqs 382 out of 3590
Neff 10.3
Searched_HMMs 13730
Date Mon Mar 25 06:31:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015091.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015091hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u1qa_ d.58.7.1 (A:) Nuclear 100.0 6.5E-31 4.8E-35 219.6 18.5 175 78-255 3-177 (183)
2 d1u1qa_ d.58.7.1 (A:) Nuclear 100.0 4.9E-29 3.6E-33 208.1 20.0 165 173-356 6-176 (183)
3 d1fxla2 d.58.7.1 (A:119-203) H 99.8 3.8E-20 2.8E-24 132.0 11.4 81 80-160 5-85 (85)
4 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.8 7.3E-20 5.3E-24 133.5 11.3 77 280-356 16-92 (96)
5 d1b7fa2 d.58.7.1 (A:205-289) S 99.8 1.1E-19 8.4E-24 129.6 11.6 82 79-160 4-85 (85)
6 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.8 3.9E-19 2.9E-23 139.7 15.4 79 280-358 40-124 (139)
7 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.8 3.7E-19 2.7E-23 139.8 15.0 82 78-161 39-120 (139)
8 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.8 2.4E-19 1.8E-23 129.3 12.3 80 279-358 5-88 (90)
9 d1b7fa1 d.58.7.1 (A:123-204) S 99.8 1.8E-19 1.3E-23 127.9 10.2 74 282-355 2-81 (82)
10 d2cq3a1 d.58.7.1 (A:110-202) R 99.8 5.9E-19 4.3E-23 128.0 13.2 81 277-357 6-90 (93)
11 d1whwa_ d.58.7.1 (A:) Probable 99.8 6.2E-19 4.5E-23 129.7 13.2 78 280-357 6-89 (99)
12 d2cqca1 d.58.7.1 (A:109-191) A 99.8 1.7E-19 1.2E-23 128.2 9.4 76 78-153 6-81 (83)
13 d2cpja1 d.58.7.1 (A:65-150) No 99.8 2.4E-19 1.7E-23 127.9 10.1 76 282-357 8-83 (86)
14 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.8 2.5E-19 1.8E-23 128.6 10.3 83 78-162 4-86 (88)
15 d2cpda1 d.58.7.1 (A:223-308) A 99.8 3.8E-19 2.8E-23 127.3 11.3 78 281-358 7-84 (86)
16 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.8 4.2E-19 3.1E-23 128.7 11.4 81 79-161 5-85 (93)
17 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.8 2.7E-19 2E-23 129.8 10.3 85 77-163 5-89 (93)
18 d1fxla1 d.58.7.1 (A:37-118) Hu 99.8 3.7E-19 2.7E-23 126.3 10.7 73 283-355 3-81 (82)
19 d2cqba1 d.58.7.1 (A:1-89) Pept 99.8 2.5E-19 1.8E-23 129.0 9.8 77 281-357 4-86 (89)
20 d1cvja1 d.58.7.1 (A:11-90) Pol 99.8 3.4E-19 2.5E-23 125.4 9.7 77 83-161 2-78 (80)
21 d1wg1a_ d.58.7.1 (A:) Probable 99.8 4.1E-19 3E-23 127.3 10.1 77 281-358 4-80 (88)
22 d2cpza1 d.58.7.1 (A:383-484) C 99.8 6E-19 4.4E-23 130.3 11.2 79 280-358 16-100 (102)
23 d1wf2a_ d.58.7.1 (A:) Heteroge 99.8 6.4E-19 4.6E-23 128.8 11.2 77 279-357 12-89 (98)
24 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.8 1.3E-18 9.5E-23 126.8 12.8 78 279-356 11-91 (95)
25 d2cq0a1 d.58.7.1 (A:231-320) E 99.8 5.4E-19 3.9E-23 127.5 10.6 83 78-162 5-87 (90)
26 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.8 3.9E-19 2.8E-23 124.7 9.4 74 281-356 4-77 (79)
27 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.8 5E-19 3.7E-23 128.3 10.0 85 170-255 6-90 (93)
28 d1whxa_ d.58.7.1 (A:) Probable 99.8 4.2E-19 3E-23 134.0 9.7 77 281-357 9-85 (111)
29 d2cqba1 d.58.7.1 (A:1-89) Pept 99.8 3.8E-19 2.8E-23 128.0 8.8 84 171-255 3-86 (89)
30 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.8 1.1E-18 7.8E-23 123.8 11.0 77 278-354 4-82 (83)
31 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.8 1.8E-19 1.3E-23 126.7 6.8 76 283-358 2-78 (80)
32 d2cpza1 d.58.7.1 (A:383-484) C 99.8 1.4E-18 1E-22 128.2 11.9 87 169-256 14-100 (102)
33 d2u2fa_ d.58.7.1 (A:) Splicing 99.8 6.5E-19 4.8E-23 125.4 9.7 79 82-162 2-80 (85)
34 d1whwa_ d.58.7.1 (A:) Probable 99.8 1.3E-18 9.2E-23 128.0 11.5 84 78-163 5-88 (99)
35 d1uawa_ d.58.7.1 (A:) Musashi- 99.8 2E-19 1.4E-23 125.2 6.7 75 82-157 1-75 (77)
36 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.8 6.9E-19 5E-23 126.2 9.6 84 170-254 4-87 (88)
37 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.8 7.4E-19 5.4E-23 124.7 9.6 79 78-157 3-81 (84)
38 d2cpha1 d.58.7.1 (A:454-547) P 99.8 1.9E-18 1.4E-22 125.5 11.9 78 281-358 7-92 (94)
39 d1cvja2 d.58.7.1 (A:91-179) Po 99.8 6.7E-19 4.9E-23 126.7 9.3 76 282-357 8-87 (89)
40 d1b7fa1 d.58.7.1 (A:123-204) S 99.8 5.4E-19 3.9E-23 125.4 8.3 80 173-253 2-81 (82)
41 d1no8a_ d.58.7.1 (A:) Nuclear 99.8 1.4E-18 1E-22 121.6 10.2 72 284-355 2-78 (78)
42 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.8 1.3E-18 9.5E-23 126.1 10.3 83 171-254 5-87 (93)
43 d2cqca1 d.58.7.1 (A:109-191) A 99.8 1.3E-18 9.6E-23 123.5 10.1 78 170-248 6-83 (83)
44 d2cqga1 d.58.7.1 (A:96-185) TA 99.8 1.6E-18 1.2E-22 124.3 10.5 84 170-256 5-88 (90)
45 d2cq0a1 d.58.7.1 (A:231-320) E 99.8 1E-18 7.6E-23 125.9 9.4 84 170-254 5-88 (90)
46 d1p1ta_ d.58.7.1 (A:) Cleavage 99.8 5.1E-19 3.7E-23 131.5 7.8 82 78-161 5-86 (104)
47 d1whya_ d.58.7.1 (A:) Putative 99.8 3.9E-18 2.8E-22 124.7 12.5 78 279-356 14-93 (97)
48 d1fxla1 d.58.7.1 (A:37-118) Hu 99.8 1.6E-18 1.2E-22 122.9 10.1 80 173-253 2-81 (82)
49 d3begb1 d.58.7.1 (B:121-207) S 99.8 4.3E-19 3.1E-23 127.0 6.9 74 283-357 1-74 (87)
50 d1cvja1 d.58.7.1 (A:11-90) Pol 99.8 1.2E-18 8.9E-23 122.6 9.1 77 175-252 2-78 (80)
51 d2cqda1 d.58.7.1 (A:1-103) RNA 99.8 4.6E-18 3.3E-22 125.7 12.6 78 280-358 8-91 (103)
52 d1wg4a_ d.58.7.1 (A:) Splicing 99.8 2.5E-18 1.8E-22 125.6 11.0 77 280-357 13-89 (98)
53 d2u2fa_ d.58.7.1 (A:) Splicing 99.8 1.1E-18 8.2E-23 124.1 8.7 81 174-255 2-82 (85)
54 d1wexa_ d.58.7.1 (A:) Heteroge 99.8 1.1E-17 7.8E-22 124.0 14.3 81 278-358 11-93 (104)
55 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 1.8E-18 1.3E-22 123.5 9.7 72 285-356 1-81 (85)
56 d2cqda1 d.58.7.1 (A:1-103) RNA 99.8 1.6E-18 1.1E-22 128.2 9.6 83 78-163 7-89 (103)
57 d2cq1a1 d.58.7.1 (A:51-138) Po 99.8 6E-18 4.4E-22 121.4 12.4 81 278-358 4-86 (88)
58 d2cq4a1 d.58.7.1 (A:132-232) R 99.8 4.8E-19 3.5E-23 130.1 6.5 78 79-157 16-93 (101)
59 d1b7fa2 d.58.7.1 (A:205-289) S 99.7 3.2E-18 2.3E-22 122.0 10.4 80 171-251 4-85 (85)
60 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.7 4.6E-18 3.3E-22 117.6 10.9 72 285-357 1-72 (75)
61 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.7 2.8E-18 2E-22 123.9 10.2 82 79-162 3-84 (90)
62 d1hd0a_ d.58.7.1 (A:) Heteroge 99.7 1.8E-18 1.3E-22 119.9 8.6 72 83-155 1-72 (75)
63 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.7 2.6E-18 1.9E-22 121.8 9.6 80 171-252 4-83 (84)
64 d2adca2 d.58.7.1 (A:444-531) P 99.7 3.6E-18 2.6E-22 122.7 10.5 77 280-356 8-87 (88)
65 d2ghpa1 d.58.7.1 (A:116-196) U 99.7 2.1E-18 1.5E-22 121.9 9.0 73 283-355 2-80 (81)
66 d2cqga1 d.58.7.1 (A:96-185) TA 99.7 2.4E-18 1.7E-22 123.5 9.4 80 78-161 5-84 (90)
67 d1no8a_ d.58.7.1 (A:) Nuclear 99.7 1.6E-18 1.1E-22 121.3 8.2 74 83-157 2-75 (78)
68 d2f9da1 d.58.7.1 (A:12-125) Pr 99.7 5.8E-18 4.2E-22 128.1 11.6 75 281-355 6-83 (114)
69 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.7 1.8E-18 1.3E-22 124.1 8.1 76 281-358 4-80 (88)
70 d2adca1 d.58.7.1 (A:335-443) P 99.7 5.8E-18 4.3E-22 127.1 11.4 77 282-358 2-80 (109)
71 d1fxla2 d.58.7.1 (A:119-203) H 99.7 4.9E-18 3.6E-22 120.8 10.1 78 173-251 6-85 (85)
72 d1p1ta_ d.58.7.1 (A:) Cleavage 99.7 4.5E-18 3.3E-22 126.3 9.8 82 173-255 8-89 (104)
73 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.7 4E-18 2.9E-22 123.0 9.3 84 171-255 3-86 (90)
74 d1uawa_ d.58.7.1 (A:) Musashi- 99.7 1.7E-18 1.2E-22 120.4 6.8 76 174-251 1-76 (77)
75 d2cpha1 d.58.7.1 (A:454-547) P 99.7 6.2E-18 4.5E-22 122.7 9.9 85 170-255 5-91 (94)
76 d1fjca_ d.58.7.1 (A:) Nucleoli 99.7 3.8E-18 2.8E-22 124.5 8.7 79 280-358 14-93 (96)
77 d1x0fa1 d.58.7.1 (A:183-257) N 99.7 1.5E-18 1.1E-22 119.8 6.0 73 83-156 1-73 (75)
78 d1hd0a_ d.58.7.1 (A:) Heteroge 99.7 4E-18 2.9E-22 118.1 8.2 75 175-251 1-75 (75)
79 d1x4ba1 d.58.7.1 (A:8-110) Het 99.7 6.3E-18 4.6E-22 124.4 9.7 76 282-358 20-101 (103)
80 d2ghpa3 d.58.7.1 (A:206-291) U 99.7 5.3E-18 3.9E-22 121.0 8.9 75 281-356 3-85 (86)
81 d2ghpa1 d.58.7.1 (A:116-196) U 99.7 4.8E-18 3.5E-22 120.0 8.3 79 174-253 2-80 (81)
82 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.7 5.1E-18 3.7E-22 120.5 8.4 74 285-358 1-81 (83)
83 d1nu4a_ d.58.7.1 (A:) Spliceso 99.7 1.2E-17 8.5E-22 120.6 10.0 78 281-358 2-86 (91)
84 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.7 3E-17 2.2E-21 121.8 12.5 77 280-358 13-96 (104)
85 d2cpea1 d.58.7.1 (A:353-453) R 99.7 8.7E-18 6.3E-22 124.3 9.3 80 278-357 4-97 (101)
86 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.7 2.7E-17 1.9E-21 120.9 11.9 78 280-357 6-95 (98)
87 d1l3ka2 d.58.7.1 (A:103-181) N 99.7 1.1E-17 7.8E-22 117.6 9.3 75 81-156 2-76 (79)
88 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.7 2.5E-18 1.8E-22 123.8 6.1 78 278-356 9-91 (91)
89 d2cq3a1 d.58.7.1 (A:110-202) R 99.7 2.5E-17 1.9E-21 119.2 11.4 85 168-255 6-90 (93)
90 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.7 9E-18 6.6E-22 119.2 8.7 79 176-255 1-80 (83)
91 d1x4ba1 d.58.7.1 (A:8-110) Het 99.7 1.2E-17 8.9E-22 122.9 9.6 82 173-256 20-101 (103)
92 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.7 1.6E-17 1.2E-21 119.6 10.1 83 170-255 5-87 (90)
93 d1x4da1 d.58.7.1 (A:8-96) Matr 99.7 2.6E-17 1.9E-21 117.7 10.4 78 279-356 5-85 (89)
94 d1x0fa1 d.58.7.1 (A:183-257) N 99.7 4.8E-18 3.5E-22 117.2 6.2 75 175-251 1-75 (75)
95 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.7 2E-17 1.5E-21 121.0 9.7 78 279-356 15-95 (99)
96 d1whya_ d.58.7.1 (A:) Putative 99.7 3.4E-17 2.4E-21 119.6 10.6 79 79-163 15-93 (97)
97 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.7 2.5E-17 1.8E-21 121.1 9.8 87 77-163 4-94 (98)
98 d1l3ka2 d.58.7.1 (A:103-181) N 99.7 2.5E-17 1.8E-21 115.7 9.3 77 173-251 2-78 (79)
99 d2cpfa1 d.58.7.1 (A:362-446) P 99.7 2.4E-17 1.8E-21 117.5 9.3 78 176-254 1-81 (85)
100 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.7 7.1E-18 5.2E-22 116.1 6.3 69 84-152 1-69 (72)
101 d2adba1 d.58.7.1 (A:177-284) P 99.7 4E-17 2.9E-21 121.8 10.6 84 78-165 4-87 (108)
102 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.7 6.5E-17 4.8E-21 119.0 11.6 77 78-155 15-91 (101)
103 d1weya_ d.58.7.1 (A:) Calcipre 99.7 3.8E-17 2.7E-21 120.3 10.0 79 280-358 3-86 (104)
104 d2f9da1 d.58.7.1 (A:12-125) Pr 99.7 3.1E-17 2.3E-21 124.0 9.6 77 78-157 4-80 (114)
105 d2msta_ d.58.7.1 (A:) Neural R 99.7 1.7E-17 1.2E-21 115.4 7.4 73 83-156 1-73 (75)
106 d2disa1 d.58.7.1 (A:8-103) Hyp 99.7 3.7E-17 2.7E-21 119.3 9.6 84 81-164 1-86 (96)
107 d2cq4a1 d.58.7.1 (A:132-232) R 99.7 1.1E-17 8.1E-22 122.7 6.6 80 172-253 17-96 (101)
108 d2ghpa2 d.58.7.1 (A:41-115) U4 99.7 4.7E-17 3.4E-21 112.4 9.3 70 283-353 1-74 (75)
109 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.7 7.2E-17 5.2E-21 114.2 10.3 78 78-161 5-82 (83)
110 d1zh5a2 d.58.7.1 (A:105-189) L 99.7 6E-17 4.4E-21 114.9 9.8 72 282-354 6-82 (85)
111 d1cvja2 d.58.7.1 (A:91-179) Po 99.7 2.6E-17 1.9E-21 118.2 7.4 80 173-255 8-87 (89)
112 d2cpxa1 d.58.7.1 (A:291-392) R 99.7 1E-17 7.3E-22 124.1 5.4 79 280-358 16-100 (102)
113 d2msta_ d.58.7.1 (A:) Neural R 99.7 3.4E-17 2.4E-21 113.8 7.8 75 175-251 1-75 (75)
114 d2cpia1 d.58.7.1 (A:101-189) E 99.7 3.5E-17 2.5E-21 117.3 7.9 70 282-351 8-89 (89)
115 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.7 7.3E-17 5.3E-21 117.3 9.7 76 80-163 17-92 (96)
116 d1zh5a2 d.58.7.1 (A:105-189) L 99.7 6.3E-17 4.6E-21 114.8 8.9 76 80-157 5-80 (85)
117 d2cpea1 d.58.7.1 (A:353-453) R 99.7 9.7E-17 7.1E-21 118.5 10.2 86 170-256 5-98 (101)
118 d2disa1 d.58.7.1 (A:8-103) Hyp 99.7 9.9E-17 7.2E-21 117.0 9.9 77 282-358 1-87 (96)
119 d2cpxa1 d.58.7.1 (A:291-392) R 99.7 2.5E-17 1.8E-21 121.9 6.7 86 170-256 15-100 (102)
120 d1wg5a_ d.58.7.1 (A:) Heteroge 99.7 2E-16 1.5E-20 117.1 11.6 79 279-358 12-96 (104)
121 d1weza_ d.58.7.1 (A:) Heteroge 99.7 1.4E-16 1E-20 117.4 10.4 79 277-357 10-93 (102)
122 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.7 1.8E-17 1.3E-21 119.2 5.2 84 168-254 8-91 (91)
123 d2adba1 d.58.7.1 (A:177-284) P 99.7 1.2E-16 8.7E-21 119.2 9.8 77 281-357 6-86 (108)
124 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.7 1.2E-16 8.5E-21 117.6 9.6 83 169-253 14-96 (101)
125 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.7 1.2E-16 8.9E-21 116.2 9.4 79 78-161 11-89 (95)
126 d2ghpa3 d.58.7.1 (A:206-291) U 99.7 4.9E-17 3.6E-21 115.8 6.3 81 172-254 3-85 (86)
127 d2cpia1 d.58.7.1 (A:101-189) E 99.7 4.3E-17 3.1E-21 116.8 6.0 74 80-153 7-86 (89)
128 d2cqpa1 d.58.7.1 (A:917-1002) 99.6 2.5E-16 1.8E-20 112.4 9.2 80 171-251 7-86 (86)
129 d2cpja1 d.58.7.1 (A:65-150) No 99.6 1.8E-16 1.3E-20 112.8 8.2 76 80-163 7-82 (86)
130 d2cqpa1 d.58.7.1 (A:917-1002) 99.6 9.8E-17 7.2E-21 114.5 6.8 78 80-157 8-85 (86)
131 d3begb1 d.58.7.1 (B:121-207) S 99.6 2.7E-16 2E-20 112.2 8.7 68 83-157 2-69 (87)
132 d2ghpa2 d.58.7.1 (A:41-115) U4 99.6 2.6E-16 1.9E-20 108.6 8.1 72 82-156 1-72 (75)
133 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.6 3.3E-16 2.4E-20 109.5 8.8 74 78-161 2-75 (79)
134 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.6 4.1E-16 3E-20 115.6 9.6 85 170-257 12-97 (104)
135 d1wg4a_ d.58.7.1 (A:) Splicing 99.6 1E-15 7.3E-20 111.5 11.4 74 78-158 12-85 (98)
136 d1fjca_ d.58.7.1 (A:) Nucleoli 99.6 2.7E-16 2E-20 114.5 8.3 83 168-256 11-93 (96)
137 d1whxa_ d.58.7.1 (A:) Probable 99.6 3.5E-16 2.5E-20 117.7 9.1 76 78-161 7-82 (111)
138 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.6 3.2E-16 2.3E-20 109.8 8.0 76 174-256 2-78 (80)
139 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.6 1.1E-16 8.4E-21 110.0 5.6 71 176-247 1-71 (72)
140 d1wg5a_ d.58.7.1 (A:) Heteroge 99.6 6.9E-16 5E-20 114.1 10.2 88 168-257 10-97 (104)
141 d1wexa_ d.58.7.1 (A:) Heteroge 99.6 1.7E-15 1.2E-19 111.9 12.2 82 78-165 12-93 (104)
142 d2adca1 d.58.7.1 (A:335-443) P 99.6 6.9E-16 5E-20 115.6 10.1 74 81-161 2-76 (109)
143 d2adca2 d.58.7.1 (A:444-531) P 99.6 1.3E-15 9.2E-20 109.1 10.2 78 171-253 8-86 (88)
144 d2cq1a1 d.58.7.1 (A:51-138) Po 99.6 7.4E-16 5.4E-20 110.3 8.1 79 77-163 4-84 (88)
145 d1wf2a_ d.58.7.1 (A:) Heteroge 99.6 1E-15 7.4E-20 111.5 8.9 77 170-255 12-89 (98)
146 d1weza_ d.58.7.1 (A:) Heteroge 99.6 1.3E-15 9.3E-20 112.2 9.4 84 168-255 10-93 (102)
147 d2cpda1 d.58.7.1 (A:223-308) A 99.6 3.4E-15 2.5E-19 106.3 11.2 77 172-255 7-83 (86)
148 d2cpya1 d.58.7.1 (A:536-638) R 99.6 1E-15 7.5E-20 113.1 8.0 83 170-254 5-87 (103)
149 d2cpya1 d.58.7.1 (A:536-638) R 99.6 8.1E-16 5.9E-20 113.7 7.4 76 279-355 5-86 (103)
150 d1wela1 d.58.7.1 (A:412-523) R 99.6 1.1E-15 7.7E-20 114.6 7.5 78 78-156 15-92 (112)
151 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.6 1.1E-15 8.3E-20 109.1 6.7 78 171-256 3-80 (88)
152 d2cq2a1 d.58.7.1 (A:25-125) Al 99.6 3.2E-15 2.3E-19 109.3 8.7 68 279-346 15-85 (101)
153 d1wg1a_ d.58.7.1 (A:) Probable 99.6 3.2E-15 2.4E-19 106.6 8.4 77 172-256 4-80 (88)
154 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.6 6.8E-15 5E-19 101.3 9.4 70 84-162 1-70 (75)
155 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.6 5.1E-15 3.7E-19 108.0 9.1 76 78-161 15-93 (99)
156 d1owxa_ d.58.7.1 (A:) Lupus LA 99.6 3.9E-15 2.9E-19 111.5 8.6 74 281-354 10-84 (113)
157 d1wela1 d.58.7.1 (A:412-523) R 99.6 4.3E-15 3.1E-19 111.2 8.2 83 170-254 15-97 (112)
158 d1nu4a_ d.58.7.1 (A:) Spliceso 99.5 3.4E-15 2.5E-19 107.4 6.3 80 172-255 2-85 (91)
159 d1x4da1 d.58.7.1 (A:8-96) Matr 99.5 5.3E-15 3.9E-19 105.5 7.1 80 77-162 4-84 (89)
160 d1u2fa_ d.58.7.1 (A:) Splicing 99.5 1.5E-16 1.1E-20 114.6 -1.4 71 283-354 2-83 (90)
161 d1wwha1 d.58.7.1 (A:169-249) N 99.5 2.8E-14 2E-18 99.2 7.4 72 282-355 4-76 (81)
162 d1u2fa_ d.58.7.1 (A:) Splicing 99.5 1.7E-15 1.3E-19 108.9 1.3 78 174-253 2-84 (90)
163 d2dita1 d.58.7.1 (A:8-106) HIV 99.5 6.9E-14 5E-18 101.7 9.2 79 279-357 5-96 (99)
164 d2cq2a1 d.58.7.1 (A:25-125) Al 99.5 3.9E-14 2.9E-18 103.4 7.1 72 78-155 15-89 (101)
165 d1jmta_ d.58.7.3 (A:) d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=6.5e-31 Score=219.57 Aligned_cols=175 Identities=19% Similarity=0.355 Sum_probs=149.9
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
+.+.++|||+|||+++|+++|+++|++||.|.++.++++..++.++|||||+|.+.++|.+|+..+++ .+..+...++.
T Consensus 3 p~~~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~-~~~~~~~~~~~ 81 (183)
T d1u1qa_ 3 PEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPH-KVDGRVVEPKR 81 (183)
T ss_dssp CHHHHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSC-EETTEECEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhcCC-cccccchhhhh
Confidence 44568999999999999999999999999999999999999999999999999999999999976443 44333333333
Q ss_pred eeccCCCCCCCCCCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhC
Q 015091 158 NWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237 (413)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~ 237 (413)
................++|||+|||.++++++|+++| +.||.|..+.++.+..++.++|||||+|.+.++|.+|++ ++
T Consensus 82 ~~~~~~~~~~~~~~~~~~i~V~~lp~~~te~~L~~~f-~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~ 159 (183)
T d1u1qa_ 82 AVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF-EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QK 159 (183)
T ss_dssp CCCTTGGGSTTTTCCCSEEEEECCCTTCCHHHHHHHH-GGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SS
T ss_pred hhhcccccccccccccceeEEccCCCcCCHHHHhhhh-ccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hC
Confidence 3333333333456667899999999999999999999 899999999999999899999999999999999999995 78
Q ss_pred CccccCcceEeccCCCCC
Q 015091 238 GVFCSTRPMRIGPATNKK 255 (413)
Q Consensus 238 ~~~~~g~~i~v~~~~~~~ 255 (413)
+..+.|+.|+|.++..+.
T Consensus 160 ~~~~~G~~i~V~~A~~k~ 177 (183)
T d1u1qa_ 160 YHTVNGHNCEVRKALSKQ 177 (183)
T ss_dssp CEEETTEEEEEEECCCHH
T ss_pred CCeECCEEEEEEecCCcc
Confidence 899999999999987654
No 2
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=4.9e-29 Score=208.06 Aligned_cols=165 Identities=23% Similarity=0.387 Sum_probs=143.0
Q ss_pred CceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccCC
Q 015091 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (413)
Q Consensus 173 ~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~~ 252 (413)
.++|||+|||+++|+++|+++| +.||.|.++.++.+..++.++|||||+|.+.++|.+|+. +++..+.++.+.+....
T Consensus 6 ~r~lfV~nLp~~~te~~L~~~F-~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~-~~~~~~~~~~~~~~~~~ 83 (183)
T d1u1qa_ 6 LRKLFIGGLSFETTDESLRSHF-EQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (183)
T ss_dssp HHEEEEESCCTTCCHHHHHHHH-GGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CCEEEEECCCCCCCHHHHHHHH-HHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHH-hcCCcccccchhhhhhh
Confidence 3799999999999999999999 899999999999999999999999999999999999995 56666777777776655
Q ss_pred CCCccCCCccCCCCcccCcccccCCCCCCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC------CcEEEEEec
Q 015091 253 NKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG------KRCGFVQFA 326 (413)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~------~~~afV~f~ 326 (413)
....... .......++|||+|||..+++++|+++|+.||.|..+.+..+ +++|||+|.
T Consensus 84 ~~~~~~~----------------~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~ 147 (183)
T d1u1qa_ 84 SREDSQR----------------PGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFD 147 (183)
T ss_dssp CTTGGGS----------------TTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEES
T ss_pred hcccccc----------------cccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEEC
Confidence 4432221 233446689999999999999999999999999999988653 579999999
Q ss_pred CHHHHHHHHHHhcCceeCCeeEEEEeccCC
Q 015091 327 DRSCAEEALRMLNGTQLGGQNIRLSWGRSP 356 (413)
Q Consensus 327 ~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~ 356 (413)
+.++|.+|++ +++..|+|+.|+|.+|.++
T Consensus 148 ~~e~A~~Al~-~~~~~~~G~~i~V~~A~~k 176 (183)
T d1u1qa_ 148 DHDSVDKIVI-QKYHTVNGHNCEVRKALSK 176 (183)
T ss_dssp CHHHHHHHHT-SSCEEETTEEEEEEECCCH
T ss_pred CHHHHHHHHH-hCCCeECCEEEEEEecCCc
Confidence 9999999997 6889999999999998764
No 3
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3.8e-20 Score=131.96 Aligned_cols=81 Identities=23% Similarity=0.449 Sum_probs=76.5
Q ss_pred CcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceeeee
Q 015091 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (413)
Q Consensus 80 ~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~~~ 159 (413)
..++|||+|||.++|+++|+++|++||.|.+|++++++.+|+++|||||+|.+.++|.+|++.|||..+.|+.+.+++.|
T Consensus 5 k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~ 84 (85)
T d1fxla2 5 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKF 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEe
Confidence 35789999999999999999999999999999999999899999999999999999999999999999999888888877
Q ss_pred c
Q 015091 160 A 160 (413)
Q Consensus 160 ~ 160 (413)
+
T Consensus 85 A 85 (85)
T d1fxla2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 5
No 4
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=7.3e-20 Score=133.45 Aligned_cols=77 Identities=32% Similarity=0.675 Sum_probs=73.4
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccCC
Q 015091 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 356 (413)
Q Consensus 280 ~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~ 356 (413)
+..++|||+||+.++++++|+++|++||.|.+|.+.+++++|||+|.+.++|.+|+..|+|..|+|+.|+|+|++++
T Consensus 16 ~~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~~ 92 (96)
T d1x4ga1 16 PKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 92 (96)
T ss_dssp SSCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCCC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEecceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999864
No 5
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.81 E-value=1.1e-19 Score=129.62 Aligned_cols=82 Identities=23% Similarity=0.418 Sum_probs=75.9
Q ss_pred CCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceeee
Q 015091 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (413)
Q Consensus 79 ~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~~ 158 (413)
...++|||+|||.++++++|+++|++||.|.+|++++++.+|+++|||||+|.+.++|.+|++.||+..+.+....+++.
T Consensus 4 ~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~ 83 (85)
T d1b7fa2 4 IKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVR 83 (85)
T ss_dssp TTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEE
Confidence 45678999999999999999999999999999999999999999999999999999999999999999998877777776
Q ss_pred ec
Q 015091 159 WA 160 (413)
Q Consensus 159 ~~ 160 (413)
|+
T Consensus 84 ~A 85 (85)
T d1b7fa2 84 LA 85 (85)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 6
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.81 E-value=3.9e-19 Score=139.70 Aligned_cols=79 Identities=28% Similarity=0.479 Sum_probs=72.1
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEec
Q 015091 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG------KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353 (413)
Q Consensus 280 ~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~------~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 353 (413)
...++|||+|||.++++++|+++|++||.|.+|.+.++ +|||||+|.+.++|.+|++.|||..|+|+.|+|+|+
T Consensus 40 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a 119 (139)
T d1u6fa1 40 DVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALA 119 (139)
T ss_dssp TTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEES
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 34578999999999999999999999999999998643 679999999999999999999999999999999999
Q ss_pred cCCCC
Q 015091 354 RSPSN 358 (413)
Q Consensus 354 ~~~~~ 358 (413)
+.+..
T Consensus 120 ~~~~~ 124 (139)
T d1u6fa1 120 ASGHQ 124 (139)
T ss_dssp SCCCC
T ss_pred CCCCC
Confidence 86544
No 7
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.80 E-value=3.7e-19 Score=139.83 Aligned_cols=82 Identities=28% Similarity=0.524 Sum_probs=74.0
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
....++|||+|||+++|+++|+++|+.||.|.+|+|++++.+|+++|||||+|.+.++|.+|++.||+..|.++ .+++
T Consensus 39 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr--~l~V 116 (139)
T d1u6fa1 39 PDVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNK--RLKV 116 (139)
T ss_dssp TTTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSC--EEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCE--EEEE
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999765 4555
Q ss_pred eecc
Q 015091 158 NWAS 161 (413)
Q Consensus 158 ~~~~ 161 (413)
.++.
T Consensus 117 ~~a~ 120 (139)
T d1u6fa1 117 ALAA 120 (139)
T ss_dssp EESS
T ss_pred EEcC
Confidence 5554
No 8
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=2.4e-19 Score=129.32 Aligned_cols=80 Identities=33% Similarity=0.555 Sum_probs=73.3
Q ss_pred CCCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC----CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEecc
Q 015091 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG----KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354 (413)
Q Consensus 279 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~----~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~ 354 (413)
....++|||+|||.++++++|+++|+.||.|.+|.+..+ +++|||+|.+.++|.+|+..|+|..|.|+.|+|.|++
T Consensus 5 ~~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~ 84 (90)
T d2cqia1 5 DGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT 84 (90)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 345689999999999999999999999999999998654 6799999999999999999999999999999999998
Q ss_pred CCCC
Q 015091 355 SPSN 358 (413)
Q Consensus 355 ~~~~ 358 (413)
++..
T Consensus 85 ~~~~ 88 (90)
T d2cqia1 85 TPSS 88 (90)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 7654
No 9
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.79 E-value=1.8e-19 Score=127.92 Aligned_cols=74 Identities=27% Similarity=0.473 Sum_probs=69.3
Q ss_pred CceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccC
Q 015091 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG------KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355 (413)
Q Consensus 282 ~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~------~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 355 (413)
+++|||+|||.++++++|+++|++||.|.++.+.++ +++|||+|.+.++|.+|++.|||..|+|+.|+|+|+++
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 468999999999999999999999999999998643 67999999999999999999999999999999999875
No 10
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=5.9e-19 Score=128.02 Aligned_cols=81 Identities=27% Similarity=0.477 Sum_probs=74.1
Q ss_pred CCCCCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC----CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEe
Q 015091 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG----KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352 (413)
Q Consensus 277 ~~~~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~----~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 352 (413)
......++|||+|||.++++++|+++|+.||.|.+|.+..+ +++|||+|.+.++|.+|+..||+..|+|+.|+|+|
T Consensus 6 ~~~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~ 85 (93)
T d2cq3a1 6 ESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 85 (93)
T ss_dssp CCSCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEe
Confidence 34455678999999999999999999999999999999765 68999999999999999999999999999999999
Q ss_pred ccCCC
Q 015091 353 GRSPS 357 (413)
Q Consensus 353 ~~~~~ 357 (413)
|+++.
T Consensus 86 A~~r~ 90 (93)
T d2cq3a1 86 ATARV 90 (93)
T ss_dssp CCSSC
T ss_pred cCcCC
Confidence 98754
No 11
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=6.2e-19 Score=129.71 Aligned_cols=78 Identities=27% Similarity=0.407 Sum_probs=72.2
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEec
Q 015091 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG------KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353 (413)
Q Consensus 280 ~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~------~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 353 (413)
..+++|||+||+.++++++|+++|++||.|.++.+..+ +++|||+|.+.++|.+|++.||+..|+|+.|+|.++
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a 85 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPS 85 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEEC
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 35678999999999999999999999999999999654 679999999999999999999999999999999999
Q ss_pred cCCC
Q 015091 354 RSPS 357 (413)
Q Consensus 354 ~~~~ 357 (413)
+.+.
T Consensus 86 ~~~~ 89 (99)
T d1whwa_ 86 TIKK 89 (99)
T ss_dssp CCCS
T ss_pred CCCC
Confidence 8754
No 12
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.7e-19 Score=128.16 Aligned_cols=76 Identities=20% Similarity=0.335 Sum_probs=71.0
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCc
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQ 153 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~ 153 (413)
+.++++|||+|||.++|+++|+++|++||.|.+|++++++.+++++|||||+|.+.++|.+|++.||+..+.++.+
T Consensus 6 p~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i 81 (83)
T d2cqca1 6 PDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRI 81 (83)
T ss_dssp CCGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEe
Confidence 4567899999999999999999999999999999999999999999999999999999999999999999976543
No 13
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=2.4e-19 Score=127.91 Aligned_cols=76 Identities=33% Similarity=0.562 Sum_probs=72.7
Q ss_pred CceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccCCC
Q 015091 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357 (413)
Q Consensus 282 ~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~ 357 (413)
.++|||+|||.++++++|+++|+.||.|.+|.+.+++++|||+|.+.++|.+|+..|||..|+|+.|+|+||....
T Consensus 8 ~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 8 RSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 83 (86)
T ss_dssp TTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCCS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCcC
Confidence 4679999999999999999999999999999999999999999999999999999999999999999999988643
No 14
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.79 E-value=2.5e-19 Score=128.56 Aligned_cols=83 Identities=19% Similarity=0.377 Sum_probs=74.6
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
..+.++|||+|||.++|+++|+++|+.||.|.+|++++++.+|+++|||||+|.+.++|++|++.|||..+.+ ..+++
T Consensus 4 s~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g--~~l~V 81 (88)
T d1rk8a_ 4 SVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMG--QTIQV 81 (88)
T ss_dssp CC-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETT--EECEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECC--EEEEE
Confidence 3467899999999999999999999999999999999999999999999999999999999999999999966 55666
Q ss_pred eeccC
Q 015091 158 NWASF 162 (413)
Q Consensus 158 ~~~~~ 162 (413)
+|+..
T Consensus 82 ~~a~~ 86 (88)
T d1rk8a_ 82 DWCFV 86 (88)
T ss_dssp EESEE
T ss_pred EEecC
Confidence 66643
No 15
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=3.8e-19 Score=127.25 Aligned_cols=78 Identities=23% Similarity=0.367 Sum_probs=73.6
Q ss_pred CCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccCCCC
Q 015091 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358 (413)
Q Consensus 281 ~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~~ 358 (413)
..++|||+|||.++++++|+++|+.||.|..+.+.+.+++|||+|.+.++|.+|+..|||..|+|+.|+|+|++++.+
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~~~ 84 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDK 84 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEEECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCCCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEccccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCCCC
Confidence 457899999999999999999999999999999999999999999999999999999999999999999999987543
No 16
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=4.2e-19 Score=128.72 Aligned_cols=81 Identities=26% Similarity=0.546 Sum_probs=74.7
Q ss_pred CCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceeee
Q 015091 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (413)
Q Consensus 79 ~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~~ 158 (413)
..+++|||+|||.++|+++|+++|+.||.|.+|++++++.+++++|||||+|.+.++|..|++.|||..+.+ ..+++.
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g--r~i~V~ 82 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDD--RIIRTD 82 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETT--EECEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECC--EEEEEE
Confidence 568899999999999999999999999999999999999999999999999999999999999999999966 456666
Q ss_pred ecc
Q 015091 159 WAS 161 (413)
Q Consensus 159 ~~~ 161 (413)
|+.
T Consensus 83 ~a~ 85 (93)
T d1h2vz_ 83 WDA 85 (93)
T ss_dssp EES
T ss_pred EcC
Confidence 654
No 17
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.7e-19 Score=129.76 Aligned_cols=85 Identities=28% Similarity=0.461 Sum_probs=75.9
Q ss_pred CCCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCccee
Q 015091 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFR 156 (413)
Q Consensus 77 ~~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~ 156 (413)
.....++|||+|||.++|+++|+++|++||.|.+|++++++.+|+++|||||+|.+.++|++|++.||+..+.++ .++
T Consensus 5 ~~~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~--~l~ 82 (93)
T d1x5ua1 5 ERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGK--PIR 82 (93)
T ss_dssp CCCTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSC--BCE
T ss_pred cCCCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCE--EEE
Confidence 345568999999999999999999999999999999999999999999999999999999999999999999664 556
Q ss_pred eeeccCC
Q 015091 157 LNWASFG 163 (413)
Q Consensus 157 ~~~~~~~ 163 (413)
+.|+...
T Consensus 83 V~~A~~~ 89 (93)
T d1x5ua1 83 VNKASAH 89 (93)
T ss_dssp EEETTTT
T ss_pred EEEcCCC
Confidence 6666543
No 18
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=3.7e-19 Score=126.29 Aligned_cols=73 Identities=33% Similarity=0.542 Sum_probs=68.8
Q ss_pred ceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccC
Q 015091 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG------KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355 (413)
Q Consensus 283 ~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~------~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 355 (413)
++|||+|||.++++++|+++|++||.|.++++.++ +|+|||+|.+.++|.+|++.|||..|+|+.|+|+|+++
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 57999999999999999999999999999999643 67999999999999999999999999999999999985
No 19
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.5e-19 Score=129.00 Aligned_cols=77 Identities=26% Similarity=0.487 Sum_probs=71.6
Q ss_pred CCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEecc
Q 015091 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG------KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354 (413)
Q Consensus 281 ~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~------~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~ 354 (413)
..++|||+|||.++++++|+++|+.||.|.++.+..+ +|+|||+|.+.++|.+|+..||+..|+|+.|+|+|++
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~ 83 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 83 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 4589999999999999999999999999999999643 7899999999999999999999999999999999998
Q ss_pred CCC
Q 015091 355 SPS 357 (413)
Q Consensus 355 ~~~ 357 (413)
++.
T Consensus 84 p~~ 86 (89)
T d2cqba1 84 PMR 86 (89)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 20
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=3.4e-19 Score=125.44 Aligned_cols=77 Identities=30% Similarity=0.552 Sum_probs=71.7
Q ss_pred eeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceeeeecc
Q 015091 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161 (413)
Q Consensus 83 ~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~~~~~ 161 (413)
+|||+|||.++|+++|+++|+.||.|.+|++++++.+|+++|||||+|.+.++|.+|++.|||..+.+ +.+++.|+.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~g--r~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKG--KPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETT--EECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECC--EEEEEEEeC
Confidence 69999999999999999999999999999999999999999999999999999999999999999966 456666664
No 21
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=4.1e-19 Score=127.27 Aligned_cols=77 Identities=18% Similarity=0.330 Sum_probs=69.7
Q ss_pred CCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccCCCC
Q 015091 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358 (413)
Q Consensus 281 ~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~~ 358 (413)
.+++|||+|||.+++++||+++|++|| +..+.+.+.+++|||+|.+.++|.+|+..||+..|+|+.|+|+|++.+..
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~~~ 80 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDAL 80 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEEEGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCCCC
T ss_pred CCCEEEEeCCCCccChHHHHHHHHhcC-ceeeeeeccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCCC
Confidence 457899999999999999999999999 44566777899999999999999999999999999999999999976543
No 22
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=6e-19 Score=130.27 Aligned_cols=79 Identities=27% Similarity=0.529 Sum_probs=72.3
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEec
Q 015091 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG------KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353 (413)
Q Consensus 280 ~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~------~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 353 (413)
+.+++|||+|||.++++++|+++|+.||.|.++.+..+ +|+|||+|.+.++|.+|+..|||..|+|+.|+|+|+
T Consensus 16 p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a 95 (102)
T d2cpza1 16 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLK 95 (102)
T ss_dssp STTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 45678999999999999999999999999999888543 679999999999999999999999999999999999
Q ss_pred cCCCC
Q 015091 354 RSPSN 358 (413)
Q Consensus 354 ~~~~~ 358 (413)
+++..
T Consensus 96 ~~k~~ 100 (102)
T d2cpza1 96 RSKND 100 (102)
T ss_dssp CCSCC
T ss_pred CCCCC
Confidence 87654
No 23
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=6.4e-19 Score=128.80 Aligned_cols=77 Identities=29% Similarity=0.561 Sum_probs=69.8
Q ss_pred CCCCceEEEecCC-CCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccCCC
Q 015091 279 DPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357 (413)
Q Consensus 279 ~~~~~~l~v~nlp-~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~ 357 (413)
....++|||+||+ ..+++++|+++|++||.|.++.+. ++||||+|.+.++|.+|+..|||+.|.|+.|+|+|++.+.
T Consensus 12 ~~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i~--rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~~ 89 (98)
T d1wf2a_ 12 RSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVH--KGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPK 89 (98)
T ss_dssp SSCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEEE--TEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTSCC
T ss_pred CCCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEEe--CCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 3455779999996 678999999999999999999995 6899999999999999999999999999999999998643
No 24
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.3e-18 Score=126.80 Aligned_cols=78 Identities=27% Similarity=0.538 Sum_probs=71.7
Q ss_pred CCCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeC---CCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccC
Q 015091 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355 (413)
Q Consensus 279 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~---~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 355 (413)
...+++|||+|||.++++++|+++|+.||.|..+.+.+ .+++|||+|.+.++|.+|++.||+..|+|+.|+|+|++.
T Consensus 11 ~~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~~ 90 (95)
T d1x4aa1 11 GNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRS 90 (95)
T ss_dssp CCCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCCC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEeccC
Confidence 34567899999999999999999999999999999864 378999999999999999999999999999999999886
Q ss_pred C
Q 015091 356 P 356 (413)
Q Consensus 356 ~ 356 (413)
.
T Consensus 91 ~ 91 (95)
T d1x4aa1 91 G 91 (95)
T ss_dssp C
T ss_pred C
Confidence 3
No 25
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=5.4e-19 Score=127.48 Aligned_cols=83 Identities=25% Similarity=0.408 Sum_probs=75.0
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
..+.++|||+|||.++|+++|+++|+.||.|.+|++++++.+|+++|||||+|.+.++|.+|++.|||..+.+ ..+++
T Consensus 5 ~~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g--~~i~v 82 (90)
T d2cq0a1 5 ADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDH--LILNV 82 (90)
T ss_dssp CSSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETT--EECEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECC--EEEEE
Confidence 3467899999999999999999999999999999999999999999999999999999999999999999965 45666
Q ss_pred eeccC
Q 015091 158 NWASF 162 (413)
Q Consensus 158 ~~~~~ 162 (413)
.|+..
T Consensus 83 ~~akp 87 (90)
T d2cq0a1 83 EWAKP 87 (90)
T ss_dssp EESSC
T ss_pred EeeeC
Confidence 66653
No 26
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=3.9e-19 Score=124.73 Aligned_cols=74 Identities=27% Similarity=0.544 Sum_probs=70.3
Q ss_pred CCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccCC
Q 015091 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 356 (413)
Q Consensus 281 ~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~ 356 (413)
.+++|||+||+ +|+++|+++|++||.|.++.+.+++++|||+|.+.++|.+|+..|||..|+|+.|+|+|++.+
T Consensus 4 ~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~ 77 (79)
T d2bz2a1 4 KGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQ 77 (79)
T ss_dssp CCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECCSS
T ss_pred CCCEEEEECCC--CCHHHHHHHHhccCccceeeeccCCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEecCC
Confidence 46899999985 899999999999999999999999999999999999999999999999999999999999854
No 27
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=5e-19 Score=128.30 Aligned_cols=85 Identities=29% Similarity=0.494 Sum_probs=79.9
Q ss_pred CCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEec
Q 015091 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (413)
Q Consensus 170 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~ 249 (413)
....++|||+|||.++++++|+++| +.||.|.++.++.+..++.++|||||+|.+.++|++|++.|++..+.|+.|+|+
T Consensus 6 ~~~~~tlfV~nLp~~~t~~~l~~~F-~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~ 84 (93)
T d1x5ua1 6 RNQDATVYVGGLDEKVSEPLLWELF-LQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVN 84 (93)
T ss_dssp CCTTTEEEEECCCTTCCHHHHHHHH-HTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHH-HHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 3445799999999999999999999 899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCC
Q 015091 250 PATNKK 255 (413)
Q Consensus 250 ~~~~~~ 255 (413)
++..+.
T Consensus 85 ~A~~~~ 90 (93)
T d1x5ua1 85 KASAHN 90 (93)
T ss_dssp ETTTTS
T ss_pred EcCCCC
Confidence 997754
No 28
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=4.2e-19 Score=134.03 Aligned_cols=77 Identities=25% Similarity=0.393 Sum_probs=73.2
Q ss_pred CCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccCCC
Q 015091 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357 (413)
Q Consensus 281 ~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~ 357 (413)
.+++|||+|||.++++++|+++|+.||.|.+|.|.+.+++|||+|.+.++|.+|+..|||..|.|+.|.|+|+....
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~~ 85 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGV 85 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETTT
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccEEEeeccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCCc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999997644
No 29
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=3.8e-19 Score=127.97 Aligned_cols=84 Identities=25% Similarity=0.437 Sum_probs=79.1
Q ss_pred CCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEecc
Q 015091 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (413)
Q Consensus 171 ~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~ 250 (413)
...++|||+|||+++++++|+++| +.||.|.++.++.+..++.++|||||+|.+.++|++|++.|++..++|+.|+|.+
T Consensus 3 ~~~~tlfV~nLp~~~te~~l~~~F-~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~ 81 (89)
T d2cqba1 3 TTKRVLYVGGLAEEVDDKVLHAAF-IPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNL 81 (89)
T ss_dssp CCCSCEEEESCCSSCCHHHHHHHH-TTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEE
T ss_pred CCCcEEEEeCCCCcCCHHHHHHHH-hhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 345799999999999999999999 8999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 015091 251 ATNKK 255 (413)
Q Consensus 251 ~~~~~ 255 (413)
+.+++
T Consensus 82 a~p~~ 86 (89)
T d2cqba1 82 AKPMR 86 (89)
T ss_dssp CCCCC
T ss_pred eCCCC
Confidence 97653
No 30
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.77 E-value=1.1e-18 Score=123.79 Aligned_cols=77 Identities=21% Similarity=0.434 Sum_probs=71.0
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC-CcEEEEEecCHHHHHHHHHHhcCcee-CCeeEEEEecc
Q 015091 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG-KRCGFVQFADRSCAEEALRMLNGTQL-GGQNIRLSWGR 354 (413)
Q Consensus 278 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~-~~~afV~f~~~~~a~~a~~~l~~~~~-~g~~l~v~~~~ 354 (413)
..+++++|||+|||.++++++|+++|+.||.|.++.+.++ +++|||+|.+.++|.+|+..|||..| +|+.|+|+|++
T Consensus 4 ~~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~ak 82 (83)
T d2b0ga1 4 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAK 82 (83)
T ss_dssp CCSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTTCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEECC
T ss_pred CCCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecccceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEec
Confidence 3456789999999999999999999999999999999765 68999999999999999999999998 57899999987
No 31
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.8e-19 Score=126.70 Aligned_cols=76 Identities=25% Similarity=0.448 Sum_probs=71.1
Q ss_pred ceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCc-eeCCeeEEEEeccCCCC
Q 015091 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT-QLGGQNIRLSWGRSPSN 358 (413)
Q Consensus 283 ~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~-~~~g~~l~v~~~~~~~~ 358 (413)
++|||+|||.++++++|+++|++||.|.++.+.+.+++|||+|.+.++|.+|++.|||. .|+|+.|+|+|++++..
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~~ 78 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLKSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKL 78 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEEETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEecccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcCc
Confidence 46999999999999999999999999998888888999999999999999999999996 69999999999997654
No 32
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.4e-18 Score=128.22 Aligned_cols=87 Identities=23% Similarity=0.402 Sum_probs=81.2
Q ss_pred CCCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEe
Q 015091 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248 (413)
Q Consensus 169 ~~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v 248 (413)
...+.++|||+|||+++++++|+++| +.||.|.++.++.+..++.++|||||+|.+.++|+.|++.|++..|.|+.|+|
T Consensus 14 ~~p~~~~l~V~nLp~~~te~~l~~~F-~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V 92 (102)
T d2cpza1 14 EGPEGANLFIYHLPQEFGDQDLLQMF-MPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKV 92 (102)
T ss_dssp CCSTTCCEEEESCCSSCCHHHHHHHH-GGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHH-HhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEE
Confidence 34556789999999999999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCc
Q 015091 249 GPATNKKT 256 (413)
Q Consensus 249 ~~~~~~~~ 256 (413)
+++..+..
T Consensus 93 ~~a~~k~~ 100 (102)
T d2cpza1 93 QLKRSKND 100 (102)
T ss_dssp ECCCCSCC
T ss_pred EEeCCCCC
Confidence 99987653
No 33
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=6.5e-19 Score=125.37 Aligned_cols=79 Identities=20% Similarity=0.477 Sum_probs=72.1
Q ss_pred ceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceeeeecc
Q 015091 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161 (413)
Q Consensus 82 ~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~~~~~ 161 (413)
.+|||+|||.++|+++|+++|+.||.|.+|++++|+.+|+++|||||+|.+.++|..|++.||+..+.++. +++.++.
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~--l~V~~A~ 79 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKK--LLVQRAS 79 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSC--CEEEECC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEE--EEEEECC
Confidence 47999999999999999999999999999999999999999999999999999999999999999997654 5555554
Q ss_pred C
Q 015091 162 F 162 (413)
Q Consensus 162 ~ 162 (413)
.
T Consensus 80 ~ 80 (85)
T d2u2fa_ 80 V 80 (85)
T ss_dssp C
T ss_pred C
Confidence 3
No 34
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=1.3e-18 Score=128.01 Aligned_cols=84 Identities=15% Similarity=0.262 Sum_probs=75.2
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
...+++|||+|||+++|+++|+++|+.||.|.+|++++++.+++++|||||+|.+.++|.+|++.||+..+.++ .|++
T Consensus 5 ~~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr--~i~V 82 (99)
T d1whwa_ 5 SSGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGR--MLHV 82 (99)
T ss_dssp CCSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSC--EEEE
T ss_pred CCCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCE--EEEE
Confidence 34577899999999999999999999999999999999999999999999999999999999999999999664 5566
Q ss_pred eeccCC
Q 015091 158 NWASFG 163 (413)
Q Consensus 158 ~~~~~~ 163 (413)
.++..+
T Consensus 83 ~~a~~~ 88 (99)
T d1whwa_ 83 LPSTIK 88 (99)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 665544
No 35
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=2e-19 Score=125.20 Aligned_cols=75 Identities=25% Similarity=0.492 Sum_probs=69.9
Q ss_pred ceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 82 ~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
|+|||+|||+++|+++|+++|++||.|.+|++++|+.+|+++|||||+|.+.++|.+|++ +++..+.++.+.++.
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~ 75 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKV 75 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEE
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEE
Confidence 689999999999999999999999999999999999999999999999999999999996 699999887666654
No 36
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.77 E-value=6.9e-19 Score=126.23 Aligned_cols=84 Identities=24% Similarity=0.398 Sum_probs=78.4
Q ss_pred CCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEec
Q 015091 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (413)
Q Consensus 170 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~ 249 (413)
....++|||+||+.++++++|+++| +.||.|.+++++.++.+|+++|||||+|.+.++|++|++.||+..+.|+.|+|+
T Consensus 4 s~~~~~l~V~nL~~~~t~~~l~~~F-~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~ 82 (88)
T d1rk8a_ 4 SVEGWILFVTSIHEEAQEDEIQEKF-CDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVD 82 (88)
T ss_dssp CC-CEEEEEESCCTTCCHHHHHHHH-GGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHH-HHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 3456789999999999999999999 899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 015091 250 PATNK 254 (413)
Q Consensus 250 ~~~~~ 254 (413)
++..+
T Consensus 83 ~a~~k 87 (88)
T d1rk8a_ 83 WCFVK 87 (88)
T ss_dssp ESEEC
T ss_pred EecCC
Confidence 98654
No 37
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=7.4e-19 Score=124.68 Aligned_cols=79 Identities=19% Similarity=0.408 Sum_probs=71.2
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
+.+.++|||+|||.++|+++|+++|+.||.|.+|++++++.+|+++|||||+|.+.++|.+|++ +++..+.|+.+.|+.
T Consensus 3 pe~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~ 81 (84)
T d1l3ka1 3 PEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKR 81 (84)
T ss_dssp CGGGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEE
T ss_pred CCCCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEe
Confidence 4566899999999999999999999999999999999999999999999999999999999996 588888776555543
No 38
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=1.9e-18 Score=125.46 Aligned_cols=78 Identities=31% Similarity=0.599 Sum_probs=71.3
Q ss_pred CCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC-------CcEEEEEecCHHHHHHHHHHh-cCceeCCeeEEEEe
Q 015091 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG-------KRCGFVQFADRSCAEEALRML-NGTQLGGQNIRLSW 352 (413)
Q Consensus 281 ~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~-------~~~afV~f~~~~~a~~a~~~l-~~~~~~g~~l~v~~ 352 (413)
.+++|||+|||.++++++|+++|+.||.|.++.+.++ +|+|||+|.+.++|.+|+..| |+..|+|+.|+|+|
T Consensus 7 ~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~ 86 (94)
T d2cpha1 7 TTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEW 86 (94)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEE
Confidence 5578999999999999999999999999999998543 689999999999999999998 89999999999999
Q ss_pred ccCCCC
Q 015091 353 GRSPSN 358 (413)
Q Consensus 353 ~~~~~~ 358 (413)
++.+..
T Consensus 87 A~~~~~ 92 (94)
T d2cpha1 87 ADSEVT 92 (94)
T ss_dssp CCCCCC
T ss_pred cCCCCC
Confidence 987543
No 39
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=6.7e-19 Score=126.67 Aligned_cols=76 Identities=28% Similarity=0.515 Sum_probs=70.9
Q ss_pred CceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC----CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccCCC
Q 015091 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG----KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357 (413)
Q Consensus 282 ~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~----~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~ 357 (413)
..+|||+|||.++++++|+++|+.||.|.++.+..+ +++|||+|.+.++|.+|+..|||..|+|+.|+|++++++.
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~~ 87 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK 87 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTTBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCTT
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecCCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 357999999999999999999999999999999754 6899999999999999999999999999999999998754
No 40
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.76 E-value=5.4e-19 Score=125.36 Aligned_cols=80 Identities=26% Similarity=0.435 Sum_probs=76.5
Q ss_pred CceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccCC
Q 015091 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (413)
Q Consensus 173 ~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~~ 252 (413)
+++|||+|||.++++++|+++| +.||.|.++.++++..+++++|||||+|.+.++|++|++.||+..+.|+.|+|.++.
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F-~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~ 80 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALF-RAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYAR 80 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHH-HTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCEEEEeCCCCCCCHHHHHHHH-HHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 4689999999999999999999 899999999999999899999999999999999999999999999999999999986
Q ss_pred C
Q 015091 253 N 253 (413)
Q Consensus 253 ~ 253 (413)
+
T Consensus 81 p 81 (82)
T d1b7fa1 81 P 81 (82)
T ss_dssp C
T ss_pred C
Confidence 4
No 41
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=1.4e-18 Score=121.55 Aligned_cols=72 Identities=28% Similarity=0.446 Sum_probs=67.9
Q ss_pred eEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC-----CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccC
Q 015091 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG-----KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355 (413)
Q Consensus 284 ~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~-----~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 355 (413)
+|||+|||.++++++|+++|++||.|.++++..+ +|+|||+|.+.++|.+|++.|||..++|+.|+|+++.+
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~S 78 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 78 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEECC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 5999999999999999999999999999999654 67999999999999999999999999999999999863
No 42
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.3e-18 Score=126.09 Aligned_cols=83 Identities=22% Similarity=0.314 Sum_probs=78.8
Q ss_pred CCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEecc
Q 015091 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (413)
Q Consensus 171 ~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~ 250 (413)
..+++|||+|||.++++++|+++| +.||.|.++.++.+..++.++|||||+|.+.++|..|++.|++..++|+.|+|.+
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F-~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~ 83 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELF-SKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDW 83 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHH-GGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHH-HHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 456799999999999999999999 8999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC
Q 015091 251 ATNK 254 (413)
Q Consensus 251 ~~~~ 254 (413)
+...
T Consensus 84 a~~~ 87 (93)
T d1h2vz_ 84 DAGF 87 (93)
T ss_dssp ESCC
T ss_pred cCCC
Confidence 8654
No 43
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.3e-18 Score=123.49 Aligned_cols=78 Identities=26% Similarity=0.427 Sum_probs=74.4
Q ss_pred CCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEe
Q 015091 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248 (413)
Q Consensus 170 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v 248 (413)
..++++|||+||+.++++++|+++| +.||.|.++.++.+..+++++|||||+|.+.++|.+|++.|++..++|+.|+|
T Consensus 6 p~~~~~l~V~nL~~~~te~~l~~~F-~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 6 PDPNCCLGVFGLSLYTTERDLREVF-SKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CCGGGCEEEESCCSSCCHHHHHHHH-HTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHH-HHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 4567899999999999999999999 89999999999999999999999999999999999999999999999999986
No 44
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.6e-18 Score=124.32 Aligned_cols=84 Identities=25% Similarity=0.331 Sum_probs=76.8
Q ss_pred CCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEec
Q 015091 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (413)
Q Consensus 170 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~ 249 (413)
....++|||+|||+++|+++|+++| +.||.|.++.++.+..+|+++|||||+|.+.++|++|++. ...++|+.|.|+
T Consensus 5 ~~~~~~lfV~nLp~~~te~~l~~~F-~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~ 81 (90)
T d2cqga1 5 VQKTSDLIVLGLPWKTTEQDLKEYF-STFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCK 81 (90)
T ss_dssp CCCCCCEEEESCCSSCCHHHHHHHH-GGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEE
T ss_pred CcCCCeEEEECCCCCCCHHHHHHHH-HhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEE
Confidence 3456789999999999999999999 8999999999999999999999999999999999999974 457999999999
Q ss_pred cCCCCCc
Q 015091 250 PATNKKT 256 (413)
Q Consensus 250 ~~~~~~~ 256 (413)
++..+..
T Consensus 82 ~a~~k~~ 88 (90)
T d2cqga1 82 LPNSKQS 88 (90)
T ss_dssp CCCTTCC
T ss_pred eCCCCCC
Confidence 9987654
No 45
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1e-18 Score=125.93 Aligned_cols=84 Identities=25% Similarity=0.368 Sum_probs=79.4
Q ss_pred CCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEec
Q 015091 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (413)
Q Consensus 170 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~ 249 (413)
....++|||+|||.++++++|+++| +.||.|.++.++.+..++.++|||||+|.+.++|++|++.|++..++|+.|+|+
T Consensus 5 ~~~~~~i~V~nLp~~~t~~~l~~~f-~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~ 83 (90)
T d2cq0a1 5 ADDNATIRVTNLSEDTRETDLQELF-RPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVE 83 (90)
T ss_dssp CSSSEEEEEESCCTTCCHHHHHTTS-TTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHH-HHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 4456799999999999999999999 899999999999999899999999999999999999999999999999999999
Q ss_pred cCCCC
Q 015091 250 PATNK 254 (413)
Q Consensus 250 ~~~~~ 254 (413)
++.++
T Consensus 84 ~akp~ 88 (90)
T d2cq0a1 84 WAKPS 88 (90)
T ss_dssp ESSCC
T ss_pred eeeCC
Confidence 98764
No 46
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=5.1e-19 Score=131.53 Aligned_cols=82 Identities=26% Similarity=0.580 Sum_probs=73.9
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
..+.++|||+|||.++|+++|+++|+.||.|.+|++++++.+|+++|||||+|.+.++|.+|++.||+..+.++. +++
T Consensus 5 ~~~~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~--i~V 82 (104)
T d1p1ta_ 5 DRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRA--LRV 82 (104)
T ss_dssp HHHHSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSC--BEE
T ss_pred CCCCCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEE--EEE
Confidence 345789999999999999999999999999999999999999999999999999999999999999999997654 455
Q ss_pred eecc
Q 015091 158 NWAS 161 (413)
Q Consensus 158 ~~~~ 161 (413)
.++.
T Consensus 83 ~~a~ 86 (104)
T d1p1ta_ 83 DNAA 86 (104)
T ss_dssp EETT
T ss_pred EECC
Confidence 5543
No 47
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=3.9e-18 Score=124.68 Aligned_cols=78 Identities=22% Similarity=0.449 Sum_probs=72.9
Q ss_pred CCCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCceeCC--eeEEEEeccCC
Q 015091 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG--QNIRLSWGRSP 356 (413)
Q Consensus 279 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g--~~l~v~~~~~~ 356 (413)
..++++|||+||+.++++++|+++|++||.|..+++.+++++|||+|.+.++|.+|++.||+..|+| ++|+|+|++..
T Consensus 14 ~~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak~~ 93 (97)
T d1whya_ 14 ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKSG 93 (97)
T ss_dssp CCCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECCCC
T ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeeccccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCCCC
Confidence 3467899999999999999999999999999999999999999999999999999999999999976 58999999863
No 48
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.6e-18 Score=122.91 Aligned_cols=80 Identities=25% Similarity=0.478 Sum_probs=76.1
Q ss_pred CceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccCC
Q 015091 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (413)
Q Consensus 173 ~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~~ 252 (413)
.++|||+|||.++++++|+++| +.||.|.+++++.+..++.++|||||+|.+.++|++|++.|++..+.|+.|+|.++.
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f-~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~Ak 80 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLF-GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR 80 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHH-HTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCEEEEECCCCCCCHHHHHHHH-HHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 3579999999999999999999 899999999999999899999999999999999999999999999999999999986
Q ss_pred C
Q 015091 253 N 253 (413)
Q Consensus 253 ~ 253 (413)
+
T Consensus 81 P 81 (82)
T d1fxla1 81 P 81 (82)
T ss_dssp C
T ss_pred C
Confidence 4
No 49
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=4.3e-19 Score=127.04 Aligned_cols=74 Identities=18% Similarity=0.240 Sum_probs=68.6
Q ss_pred ceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccCCC
Q 015091 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357 (413)
Q Consensus 283 ~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~ 357 (413)
++|||+|||.++++++|+++|++||.|.++.+.++ |+|||+|.+.++|.+||..|||..|.|+.|+|.+++.+.
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~-g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~~ 74 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKV 74 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT-SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEEE
T ss_pred CeEEEECCCCcCCHHHHHHHHhhhccccccccccc-ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecCc
Confidence 46999999999999999999999999999998765 899999999999999999999999999999999876543
No 50
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.2e-18 Score=122.55 Aligned_cols=77 Identities=34% Similarity=0.506 Sum_probs=74.7
Q ss_pred eEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccCC
Q 015091 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (413)
Q Consensus 175 ~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~~ 252 (413)
+|||+|||.++++++|+++| +.||.|.++++++++.+++++|||||+|.+.++|..|++.|++..+.|+.|+|.++.
T Consensus 2 slfV~nL~~~~te~~l~~~F-~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKF-SPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHH-GGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHH-HHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 69999999999999999999 899999999999999999999999999999999999999999999999999999985
No 51
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=4.6e-18 Score=125.69 Aligned_cols=78 Identities=28% Similarity=0.449 Sum_probs=69.9
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEec
Q 015091 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG------KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353 (413)
Q Consensus 280 ~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~------~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 353 (413)
...++|||+|||..+++++|+++|+.||.|.+|.+..+ +++|||+|.+.++|.+|++.+++ .|+|+.|+|+++
T Consensus 8 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a 86 (103)
T d2cqda1 8 TTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLA 86 (103)
T ss_dssp CSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEES
T ss_pred CCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEc
Confidence 34578999999999999999999999999999999653 78999999999999999998875 799999999998
Q ss_pred cCCCC
Q 015091 354 RSPSN 358 (413)
Q Consensus 354 ~~~~~ 358 (413)
..+..
T Consensus 87 ~~~~~ 91 (103)
T d2cqda1 87 YLGAK 91 (103)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 86543
No 52
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=2.5e-18 Score=125.60 Aligned_cols=77 Identities=19% Similarity=0.267 Sum_probs=71.6
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccCCC
Q 015091 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357 (413)
Q Consensus 280 ~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~ 357 (413)
...++|||+|||.++++++|+++|+.||.|+++.+.+ +++|||+|.+.++|.+||+.|||..|.|+.|+|.+++.+.
T Consensus 13 ~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~~~ 89 (98)
T d1wg4a_ 13 RSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYP 89 (98)
T ss_dssp SCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEecCC
Confidence 4567899999999999999999999999999999875 5899999999999999999999999999999999988654
No 53
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.1e-18 Score=124.12 Aligned_cols=81 Identities=25% Similarity=0.427 Sum_probs=77.2
Q ss_pred ceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccCCC
Q 015091 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253 (413)
Q Consensus 174 ~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~~~ 253 (413)
.+|||+|||.++++++|+++| +.||+|.++++++++.+|.++|||||+|.+.++|..|++.|++..+.|+.|.|.++..
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F-~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~ 80 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELL-TSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASV 80 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHH-TSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHH-HhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 479999999999999999999 8999999999999999999999999999999999999999999999999999999976
Q ss_pred CC
Q 015091 254 KK 255 (413)
Q Consensus 254 ~~ 255 (413)
..
T Consensus 81 ~~ 82 (85)
T d2u2fa_ 81 GA 82 (85)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 54
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.1e-17 Score=124.00 Aligned_cols=81 Identities=21% Similarity=0.281 Sum_probs=73.8
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhc--CceeCCeeEEEEeccC
Q 015091 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN--GTQLGGQNIRLSWGRS 355 (413)
Q Consensus 278 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~--~~~~~g~~l~v~~~~~ 355 (413)
....+++|||+|||..+++++|+++|+.||.|.++.+.+++++|||+|++.++|.+|+..|+ +..++|+.|+|.|++.
T Consensus 11 ~~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~~ 90 (104)
T d1wexa_ 11 KVSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTS 90 (104)
T ss_dssp CCCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECSS
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEecceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcCC
Confidence 44568899999999999999999999999999999999999999999999999999999874 5668999999999986
Q ss_pred CCC
Q 015091 356 PSN 358 (413)
Q Consensus 356 ~~~ 358 (413)
+..
T Consensus 91 ~~~ 93 (104)
T d1wexa_ 91 KRI 93 (104)
T ss_dssp SSC
T ss_pred Ccc
Confidence 543
No 55
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.8e-18 Score=123.48 Aligned_cols=72 Identities=26% Similarity=0.504 Sum_probs=67.1
Q ss_pred EEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC---------CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccC
Q 015091 285 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG---------KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355 (413)
Q Consensus 285 l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~---------~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 355 (413)
|||+|||.++++++|+++|++||.|.++.+.++ +|+|||+|.+.++|.+|+..|||..|+|+.|+|+|++.
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 799999999999999999999999999998642 67999999999999999999999999999999999864
Q ss_pred C
Q 015091 356 P 356 (413)
Q Consensus 356 ~ 356 (413)
.
T Consensus 81 ~ 81 (85)
T d2cpfa1 81 A 81 (85)
T ss_dssp S
T ss_pred C
Confidence 3
No 56
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.6e-18 Score=128.25 Aligned_cols=83 Identities=29% Similarity=0.513 Sum_probs=72.1
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
+...++|||+|||+++|+++|+++|+.||.|.+|++++++.+|+++|||||+|.+.++|.+|++.+|+ .+.++ .+++
T Consensus 7 d~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr--~l~V 83 (103)
T d2cqda1 7 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGR--KANV 83 (103)
T ss_dssp SCSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTE--ECEE
T ss_pred CCCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCE--EEEE
Confidence 44567899999999999999999999999999999999999999999999999999999999998876 57554 5555
Q ss_pred eeccCC
Q 015091 158 NWASFG 163 (413)
Q Consensus 158 ~~~~~~ 163 (413)
.++...
T Consensus 84 ~~a~~~ 89 (103)
T d2cqda1 84 NLAYLG 89 (103)
T ss_dssp EESTTT
T ss_pred EEcCCC
Confidence 555433
No 57
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=6e-18 Score=121.40 Aligned_cols=81 Identities=17% Similarity=0.277 Sum_probs=74.2
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHh--cCceeCCeeEEEEeccC
Q 015091 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML--NGTQLGGQNIRLSWGRS 355 (413)
Q Consensus 278 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l--~~~~~~g~~l~v~~~~~ 355 (413)
...++++|||+|||.++++++|+++|+.||.|.++.+.+++++|||+|.+.++|.+|+..+ ++..++|+.|+|.|++.
T Consensus 4 ~~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk~ 83 (88)
T d2cq1a1 4 DGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNH 83 (88)
T ss_dssp CSSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECSC
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHhcccccccccccccceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECCC
Confidence 3457899999999999999999999999999999999999999999999999999999875 56789999999999986
Q ss_pred CCC
Q 015091 356 PSN 358 (413)
Q Consensus 356 ~~~ 358 (413)
+..
T Consensus 84 ~~l 86 (88)
T d2cq1a1 84 KEL 86 (88)
T ss_dssp SSC
T ss_pred CCC
Confidence 543
No 58
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=4.8e-19 Score=130.13 Aligned_cols=78 Identities=17% Similarity=0.306 Sum_probs=70.9
Q ss_pred CCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 79 ~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
.+.++|||+|||.++|+++|+++|+.||.|.+|++++++.+|+++|||||+|.+.++|.+|++ |||..|.++.+.|+.
T Consensus 16 ~~~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~ 93 (101)
T d2cq4a1 16 RDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQA 93 (101)
T ss_dssp HHHTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEE
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEE
Confidence 456899999999999999999999999999999999999999999999999999999999995 999999775555443
No 59
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.75 E-value=3.2e-18 Score=122.01 Aligned_cols=80 Identities=30% Similarity=0.560 Sum_probs=74.8
Q ss_pred CCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccC--cceEe
Q 015091 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST--RPMRI 248 (413)
Q Consensus 171 ~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g--~~i~v 248 (413)
..+++|||+|||.++++++|+++| +.||.|.++++++++.+++++|||||+|.+.++|.+|++.||+..+.| ++|+|
T Consensus 4 ~~~t~lfV~nlp~~~te~~l~~~F-~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V 82 (85)
T d1b7fa2 4 IKDTNLYVTNLPRTITDDQLDTIF-GKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSV 82 (85)
T ss_dssp TTTCEEEEESCCTTCCHHHHHHHH-TSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHH-HhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEE
Confidence 455689999999999999999999 899999999999999999999999999999999999999999999876 88999
Q ss_pred ccC
Q 015091 249 GPA 251 (413)
Q Consensus 249 ~~~ 251 (413)
++|
T Consensus 83 ~~A 85 (85)
T d1b7fa2 83 RLA 85 (85)
T ss_dssp EEC
T ss_pred EEC
Confidence 875
No 60
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=4.6e-18 Score=117.62 Aligned_cols=72 Identities=19% Similarity=0.329 Sum_probs=68.2
Q ss_pred EEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccCCC
Q 015091 285 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357 (413)
Q Consensus 285 l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~ 357 (413)
|||+|||.++++++|+++|++|| +..+.+.+.+++|||+|.+.++|.+|+..|||..++|+.|+|+|++...
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d~ 72 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFVDKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTDA 72 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEEETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCSTT
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceeecccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCCC
Confidence 79999999999999999999999 7788889999999999999999999999999999999999999997643
No 61
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.8e-18 Score=123.89 Aligned_cols=82 Identities=23% Similarity=0.490 Sum_probs=73.6
Q ss_pred CCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceeee
Q 015091 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (413)
Q Consensus 79 ~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~~ 158 (413)
.+.++|||+|||+++|+++|+++|+.||.|.+|.++.++.++.++|||||+|.+.++|++|++.||+..+.++.+ ++.
T Consensus 3 ~~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l--~V~ 80 (90)
T d1x5sa1 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI--RVD 80 (90)
T ss_dssp CCCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCC--EEE
T ss_pred CCCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEE--EEE
Confidence 467889999999999999999999999999999999998899999999999999999999999999999976554 455
Q ss_pred eccC
Q 015091 159 WASF 162 (413)
Q Consensus 159 ~~~~ 162 (413)
++..
T Consensus 81 ~a~~ 84 (90)
T d1x5sa1 81 QAGK 84 (90)
T ss_dssp EEEC
T ss_pred EcCC
Confidence 5543
No 62
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.8e-18 Score=119.93 Aligned_cols=72 Identities=22% Similarity=0.409 Sum_probs=66.7
Q ss_pred eeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcce
Q 015091 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNF 155 (413)
Q Consensus 83 ~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~ 155 (413)
+|||+|||+++|+++|+++|++||.|.+|++++++.+|+++|||||+|.+.++|++|++ +++..+.|+.+.+
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V 72 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDP 72 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEE
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEe
Confidence 58999999999999999999999999999999999999999999999999999999997 6888887765544
No 63
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.6e-18 Score=121.83 Aligned_cols=80 Identities=25% Similarity=0.359 Sum_probs=74.8
Q ss_pred CCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEecc
Q 015091 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (413)
Q Consensus 171 ~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~ 250 (413)
...++|||+|||.++++++|+++| +.||.|..+.++.+..+|.++|||||+|.+.++|.+|++ ++++.+.|+.|+|+.
T Consensus 4 e~~~~lfV~nlp~~~te~~l~~~F-~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~ 81 (84)
T d1l3ka1 4 EQLRKLFIGGLSFETTDESLRSHF-EQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKR 81 (84)
T ss_dssp GGGGEEEEESCCTTCCHHHHHHHH-GGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEE
T ss_pred CCCcEEEEECCCCCCCHHHHHHHH-HhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEe
Confidence 345789999999999999999999 899999999999999999999999999999999999995 689999999999988
Q ss_pred CC
Q 015091 251 AT 252 (413)
Q Consensus 251 ~~ 252 (413)
|.
T Consensus 82 A~ 83 (84)
T d1l3ka1 82 AV 83 (84)
T ss_dssp CC
T ss_pred ee
Confidence 75
No 64
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=3.6e-18 Score=122.66 Aligned_cols=77 Identities=26% Similarity=0.402 Sum_probs=70.0
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEee--CCCcEEEEEecCHHHHHHHHHHhcCcee-CCeeEEEEeccCC
Q 015091 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP--AGKRCGFVQFADRSCAEEALRMLNGTQL-GGQNIRLSWGRSP 356 (413)
Q Consensus 280 ~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~--~~~~~afV~f~~~~~a~~a~~~l~~~~~-~g~~l~v~~~~~~ 356 (413)
+++++|||+|||.++++++|+++|+.||.|.++.+. +++++|||+|++.++|.+|+..|||..| +|+.|+|+|+++.
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk~~ 87 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKST 87 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECSSC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeeecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCCCC
Confidence 467899999999999999999999999999877665 4578999999999999999999999998 5899999999863
No 65
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.75 E-value=2.1e-18 Score=121.91 Aligned_cols=73 Identities=15% Similarity=0.288 Sum_probs=66.8
Q ss_pred ceEEEecCCCCCCHHHHHHHHhcCCCeEEEEee------CCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccC
Q 015091 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355 (413)
Q Consensus 283 ~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~------~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 355 (413)
++|||+|||.++++++|+++|+.||.|..+.+. +.+++|||+|.+.++|.+|++.|||..|+|+.|+|+++++
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 689999999999999999999999999777663 2378999999999999999999999999999999999875
No 66
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.4e-18 Score=123.45 Aligned_cols=80 Identities=21% Similarity=0.345 Sum_probs=69.3
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
....++|||+|||+++|+++|+++|+.||.|.+|+|++|+.+|+++|||||+|.+.++|.+|++. ...+.| +.+.+
T Consensus 5 ~~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~G--r~i~v 80 (90)
T d2cqga1 5 VQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDG--RWCDC 80 (90)
T ss_dssp CCCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETT--EEEEE
T ss_pred CcCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCC--EEeEE
Confidence 34678899999999999999999999999999999999999999999999999999999999974 335655 45555
Q ss_pred eecc
Q 015091 158 NWAS 161 (413)
Q Consensus 158 ~~~~ 161 (413)
.++.
T Consensus 81 ~~a~ 84 (90)
T d2cqga1 81 KLPN 84 (90)
T ss_dssp ECCC
T ss_pred EeCC
Confidence 5544
No 67
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.6e-18 Score=121.28 Aligned_cols=74 Identities=22% Similarity=0.433 Sum_probs=68.6
Q ss_pred eeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 83 ~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
+|||+|||+++++++|+++|++||.|.+|++..++ +|+++|||||+|.+.++|.+|++.|||..+.++.+.|++
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~ 75 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL 75 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 59999999999999999999999999999999986 799999999999999999999999999999876655554
No 68
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=5.8e-18 Score=128.10 Aligned_cols=75 Identities=19% Similarity=0.383 Sum_probs=70.6
Q ss_pred CCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC---CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccC
Q 015091 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG---KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355 (413)
Q Consensus 281 ~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~---~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 355 (413)
.+++|||+|||.++++++|+++|+.||.|.+|.+..+ +|+|||+|.+.++|..|+..|||..|+|+.|+|.|+..
T Consensus 6 ~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~ 83 (114)
T d2f9da1 6 VNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNA 83 (114)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcCCeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 4689999999999999999999999999999999754 78999999999999999999999999999999999864
No 69
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=1.8e-18 Score=124.07 Aligned_cols=76 Identities=33% Similarity=0.523 Sum_probs=69.1
Q ss_pred CCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeC-CCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccCCCC
Q 015091 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358 (413)
Q Consensus 281 ~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~-~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~~ 358 (413)
.+++|||+|||.++++++|+++|++||.|.+|.+.. .++||||+|.+.++|++|+. ++..|+|+.|+|++++++..
T Consensus 4 ~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~k~~ 80 (88)
T d1wf0a_ 4 GSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEPKHN 80 (88)
T ss_dssp CCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCCCCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEeeccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCCCCC
Confidence 568999999999999999999999999999998865 48999999999999999986 78889999999999986543
No 70
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=5.8e-18 Score=127.11 Aligned_cols=77 Identities=36% Similarity=0.515 Sum_probs=70.7
Q ss_pred CceEEEecCC-CCCCHHHHHHHHhcCCCeEEEEeeCC-CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccCCCC
Q 015091 282 NTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKIPAG-KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358 (413)
Q Consensus 282 ~~~l~v~nlp-~~~~~~~l~~~f~~~G~i~~v~~~~~-~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~~ 358 (413)
+++|||+||+ ..+++++|+++|+.||.|++|.|.++ +|+|||+|++.++|.+|+..|+|..|.|+.|+|+|++....
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~~~~ 80 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNV 80 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSCCCC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCCC
Confidence 5789999995 56999999999999999999999876 68999999999999999999999999999999999876543
No 71
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=4.9e-18 Score=120.83 Aligned_cols=78 Identities=28% Similarity=0.533 Sum_probs=73.0
Q ss_pred CceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCc--ceEecc
Q 015091 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR--PMRIGP 250 (413)
Q Consensus 173 ~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~--~i~v~~ 250 (413)
+++|||+|||.++++++|+++| +.||.|.+++++.++.+++++|||||+|.+.++|++|++.||+..+.|+ .|+|++
T Consensus 6 ~~~lfV~nLp~~~te~~L~~~F-~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~ 84 (85)
T d1fxla2 6 DANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKF 84 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHH-GGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHH-HHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEe
Confidence 4689999999999999999999 8999999999999998999999999999999999999999999999874 488877
Q ss_pred C
Q 015091 251 A 251 (413)
Q Consensus 251 ~ 251 (413)
|
T Consensus 85 A 85 (85)
T d1fxla2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 5
No 72
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=4.5e-18 Score=126.32 Aligned_cols=82 Identities=33% Similarity=0.592 Sum_probs=77.8
Q ss_pred CceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccCC
Q 015091 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (413)
Q Consensus 173 ~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~~ 252 (413)
.++|||+||+.++++++|+++| +.||.|.++.++.+..+|+++|||||+|.+.++|++|++.|++..+.|+.|+|+++.
T Consensus 8 ~rtl~V~nLp~~~te~~l~~~f-~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~ 86 (104)
T d1p1ta_ 8 LRSVFVGNIPYEATEEQLKDIF-SEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAA 86 (104)
T ss_dssp HSCEEEESCCTTSCHHHHHHHH-HTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETT
T ss_pred CCEEEEECCCCcCCHHHHHHhh-hccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 4689999999999999999999 899999999999999999999999999999999999999999999999999999987
Q ss_pred CCC
Q 015091 253 NKK 255 (413)
Q Consensus 253 ~~~ 255 (413)
...
T Consensus 87 ~~~ 89 (104)
T d1p1ta_ 87 SEK 89 (104)
T ss_dssp CTT
T ss_pred CCC
Confidence 653
No 73
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=4e-18 Score=123.02 Aligned_cols=84 Identities=32% Similarity=0.559 Sum_probs=78.6
Q ss_pred CCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEecc
Q 015091 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (413)
Q Consensus 171 ~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~ 250 (413)
...++|||+|||+++++++|+++| +.||.|..+.++.+..++.++|||||+|.+.++|+.|++.|++..+.|+.|+|++
T Consensus 3 ~~~~kifV~nLp~~~t~~~l~~~F-~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~ 81 (90)
T d1x5sa1 3 SDEGKLFVGGLSFDTNEQSLEQVF-SKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81 (90)
T ss_dssp CCCSEEEEESCCTTCCHHHHHHHH-HHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEE
T ss_pred CCCCEEEEECCCCcCCHHHHHHhh-hccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 345689999999999999999999 8999999999999888999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 015091 251 ATNKK 255 (413)
Q Consensus 251 ~~~~~ 255 (413)
+..+.
T Consensus 82 a~~~~ 86 (90)
T d1x5sa1 82 AGKSS 86 (90)
T ss_dssp EECCC
T ss_pred cCCCC
Confidence 87654
No 74
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=1.7e-18 Score=120.44 Aligned_cols=76 Identities=26% Similarity=0.413 Sum_probs=72.2
Q ss_pred ceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccC
Q 015091 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (413)
Q Consensus 174 ~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~ 251 (413)
++|||+|||+++++++|+++| +.||.|.++++++++.+++++|||||+|.+.++|.+|++ ++++.++|+.|+|+.|
T Consensus 1 cklfV~nLp~~~te~~l~~~F-~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYF-GQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHH-TTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHH-HHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 479999999999999999999 899999999999999999999999999999999999995 7999999999999865
No 75
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=6.2e-18 Score=122.71 Aligned_cols=85 Identities=18% Similarity=0.326 Sum_probs=77.5
Q ss_pred CCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCC-CCCCceeEEEEeCCHHHHHHHHHhh-CCccccCcceE
Q 015091 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL-TGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTRPMR 247 (413)
Q Consensus 170 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~-~g~~~g~afv~f~~~~~a~~a~~~l-~~~~~~g~~i~ 247 (413)
...+++|||+|||.++++++|+++| +.||.|.++.++.+.. +|.++|||||+|.+.++|.+|++.| ++..+.|+.|.
T Consensus 5 ~~~~~~l~V~nLp~~~~e~~l~~~F-~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~ 83 (94)
T d2cpha1 5 KQTTSKILVRNIPFQANQREIRELF-STFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLV 83 (94)
T ss_dssp SSCCCCEEEESCCTTCCHHHHHHHH-HTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHH-HHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEE
Confidence 3456789999999999999999999 8999999999988753 7899999999999999999999998 88999999999
Q ss_pred eccCCCCC
Q 015091 248 IGPATNKK 255 (413)
Q Consensus 248 v~~~~~~~ 255 (413)
|+++....
T Consensus 84 V~~A~~~~ 91 (94)
T d2cpha1 84 LEWADSEV 91 (94)
T ss_dssp EEECCCCC
T ss_pred EEEcCCCC
Confidence 99997754
No 76
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.73 E-value=3.8e-18 Score=124.53 Aligned_cols=79 Identities=20% Similarity=0.363 Sum_probs=71.3
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEee-CCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccCCCC
Q 015091 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 358 (413)
Q Consensus 280 ~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~-~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~~ 358 (413)
...++|||+|||.++++++|+++|+.||.|..+... +.+++|||+|.+.++|.+|+..||+..|+|+.|+|.|++++..
T Consensus 14 ~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~k~~ 93 (96)
T d1fjca_ 14 RAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGG 93 (96)
T ss_dssp TGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSSSCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcccceeeeecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCCCCC
Confidence 356899999999999999999999999998777553 4589999999999999999999999999999999999987543
No 77
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.5e-18 Score=119.80 Aligned_cols=73 Identities=16% Similarity=0.334 Sum_probs=66.1
Q ss_pred eeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCccee
Q 015091 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFR 156 (413)
Q Consensus 83 ~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~ 156 (413)
+|||+|||+++|+++|+++|++||.|.+|++++++.+++++|||||+|.+.++|++|++. ++..+.++.+.++
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~-~~~~i~g~~i~vk 73 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK-KYHNVGLSKCEIK 73 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTC-SSCCBTTBCCEEE
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHhh-CCCEECCEEeEEE
Confidence 589999999999999999999999999999999999999999999999999999999964 6667777655544
No 78
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=4e-18 Score=118.07 Aligned_cols=75 Identities=24% Similarity=0.450 Sum_probs=71.2
Q ss_pred eEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccC
Q 015091 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (413)
Q Consensus 175 ~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~ 251 (413)
+|||+|||+++++++|+++| +.||.|.++.++.+..+++++|||||+|.+.++|++|++ +++..+.|+.|+|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F-~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYF-SKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHH-HTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHH-HhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 48999999999999999999 899999999999999999999999999999999999995 7999999999999764
No 79
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=6.3e-18 Score=124.45 Aligned_cols=76 Identities=21% Similarity=0.405 Sum_probs=69.8
Q ss_pred CceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccC
Q 015091 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG------KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 355 (413)
Q Consensus 282 ~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~------~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 355 (413)
.++|||+|||.++++++|+++|++||.|.++.|.++ +|||||+|.+.++|.+|+. +++..|+|+.|.|+++++
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcc
Confidence 368999999999999999999999999999999653 7899999999999999997 699999999999999987
Q ss_pred CCC
Q 015091 356 PSN 358 (413)
Q Consensus 356 ~~~ 358 (413)
+..
T Consensus 99 ke~ 101 (103)
T d1x4ba1 99 REE 101 (103)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 80
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.73 E-value=5.3e-18 Score=120.96 Aligned_cols=75 Identities=29% Similarity=0.602 Sum_probs=66.9
Q ss_pred CCceEEEecCCCCCC-HHHHHHHHhcCCCeEEEEeeC-------CCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEe
Q 015091 281 NNTTVFVGNLDSIVT-DEHLRELFSQYGQLVHVKIPA-------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352 (413)
Q Consensus 281 ~~~~l~v~nlp~~~~-~~~l~~~f~~~G~i~~v~~~~-------~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 352 (413)
..++|||+|||.+++ +++|+++|++||.|.++.|.. .+|+|||+|.+.++|.+|++ ||+..|+|+.|+|+|
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 358999999999976 556999999999999999854 26799999999999999996 999999999999999
Q ss_pred ccCC
Q 015091 353 GRSP 356 (413)
Q Consensus 353 ~~~~ 356 (413)
++.+
T Consensus 82 a~~k 85 (86)
T d2ghpa3 82 ADKK 85 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8864
No 81
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.73 E-value=4.8e-18 Score=119.96 Aligned_cols=79 Identities=5% Similarity=0.116 Sum_probs=69.0
Q ss_pred ceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccCCC
Q 015091 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253 (413)
Q Consensus 174 ~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~~~ 253 (413)
++|||+|||+++++++|+++| +.||.|..+.++.+..++.++|||||+|.+.++|.+|++.||+..+.|+.|+|+++.+
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f-~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLL-QDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHH-HHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred cEEEEECCCCcCCHHHHHHHH-HHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 589999999999999999999 8999999998888888899999999999999999999999999999999999999865
No 82
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=5.1e-18 Score=120.47 Aligned_cols=74 Identities=28% Similarity=0.552 Sum_probs=66.3
Q ss_pred EEEecCCCCCCHHHHHHHHhcCCCeEEE-EeeC------CCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEeccCCC
Q 015091 285 VFVGNLDSIVTDEHLRELFSQYGQLVHV-KIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 357 (413)
Q Consensus 285 l~v~nlp~~~~~~~l~~~f~~~G~i~~v-~~~~------~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~ 357 (413)
|||+|||.++++++|+++|++||.|.++ .+.+ .+++|||+|.+.++|.+|++.|+|..|+|+.|+|+|+.++.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 7999999999999999999999998654 4543 36899999999999999999999999999999999998654
Q ss_pred C
Q 015091 358 N 358 (413)
Q Consensus 358 ~ 358 (413)
.
T Consensus 81 ~ 81 (83)
T d1x5ta1 81 S 81 (83)
T ss_dssp C
T ss_pred c
Confidence 3
No 83
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=1.2e-17 Score=120.59 Aligned_cols=78 Identities=26% Similarity=0.568 Sum_probs=70.7
Q ss_pred CCceEEEecCCCCCCHHHHHH----HHhcCCCeEEEEeeC---CCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEec
Q 015091 281 NNTTVFVGNLDSIVTDEHLRE----LFSQYGQLVHVKIPA---GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353 (413)
Q Consensus 281 ~~~~l~v~nlp~~~~~~~l~~----~f~~~G~i~~v~~~~---~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 353 (413)
++++|||+|||..++++||++ +|++||.|.+|.+.+ .+++|||+|.+.++|.+|++.|||..|+|+.|+|+|+
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~a 81 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYA 81 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 468999999999999999864 689999999999865 3899999999999999999999999999999999999
Q ss_pred cCCCC
Q 015091 354 RSPSN 358 (413)
Q Consensus 354 ~~~~~ 358 (413)
+.+..
T Consensus 82 k~~~~ 86 (91)
T d1nu4a_ 82 KTDSD 86 (91)
T ss_dssp SSCCT
T ss_pred CCCch
Confidence 87643
No 84
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=3e-17 Score=121.84 Aligned_cols=77 Identities=31% Similarity=0.501 Sum_probs=66.3
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeC-------CCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEe
Q 015091 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352 (413)
Q Consensus 280 ~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~-------~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 352 (413)
.+.++|||+|||.++++++|+++|+.|| |.++.+.. .+++|||+|.+.++|++|+ .||+..|+|+.|+|+|
T Consensus 13 ~p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~ 90 (104)
T d1wi8a_ 13 SPPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDV 90 (104)
T ss_dssp SSCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEE
Confidence 3568999999999999999999999999 66666643 2579999999999998666 5999999999999999
Q ss_pred ccCCCC
Q 015091 353 GRSPSN 358 (413)
Q Consensus 353 ~~~~~~ 358 (413)
++.+..
T Consensus 91 a~~~~~ 96 (104)
T d1wi8a_ 91 ADQAQD 96 (104)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 986543
No 85
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=8.7e-18 Score=124.27 Aligned_cols=80 Identities=25% Similarity=0.442 Sum_probs=69.4
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHhcCCCeEEE--------EeeC------CCcEEEEEecCHHHHHHHHHHhcCcee
Q 015091 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV--------KIPA------GKRCGFVQFADRSCAEEALRMLNGTQL 343 (413)
Q Consensus 278 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v--------~~~~------~~~~afV~f~~~~~a~~a~~~l~~~~~ 343 (413)
.+...++|||+|||..+++++|+++|+.||.|..+ .+.. .+++|||+|.+.++|.+|++.|||..|
T Consensus 4 ~~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~ 83 (101)
T d2cpea1 4 EDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDF 83 (101)
T ss_dssp CCCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEE
Confidence 44567899999999999999999999999988533 3322 268999999999999999999999999
Q ss_pred CCeeEEEEeccCCC
Q 015091 344 GGQNIRLSWGRSPS 357 (413)
Q Consensus 344 ~g~~l~v~~~~~~~ 357 (413)
+|+.|+|+|++.+.
T Consensus 84 ~gr~i~V~~a~~~~ 97 (101)
T d2cpea1 84 QGSKLKVSLARKKP 97 (101)
T ss_dssp TTEECEEECSSCCC
T ss_pred CCEEEEEEEcCCCC
Confidence 99999999998743
No 86
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=2.7e-17 Score=120.93 Aligned_cols=78 Identities=28% Similarity=0.516 Sum_probs=70.2
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhc------CceeCCee
Q 015091 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG------KRCGFVQFADRSCAEEALRMLN------GTQLGGQN 347 (413)
Q Consensus 280 ~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~------~~~afV~f~~~~~a~~a~~~l~------~~~~~g~~ 347 (413)
..+++|||+|||.++++++|+++|++||.|.++.+..+ +|+|||+|.+.++|.+|++.|+ |..|+|+.
T Consensus 6 ~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~ 85 (98)
T d1x4ha1 6 TEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQ 85 (98)
T ss_dssp CCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCE
T ss_pred CCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEE
Confidence 34678999999999999999999999999999998643 7899999999999999999886 66799999
Q ss_pred EEEEeccCCC
Q 015091 348 IRLSWGRSPS 357 (413)
Q Consensus 348 l~v~~~~~~~ 357 (413)
|+|+|++++.
T Consensus 86 l~v~~a~~k~ 95 (98)
T d1x4ha1 86 LKVDLAVTRD 95 (98)
T ss_dssp EEEECCCCCC
T ss_pred EEEEECCCCC
Confidence 9999998754
No 87
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=1.1e-17 Score=117.60 Aligned_cols=75 Identities=13% Similarity=0.425 Sum_probs=69.3
Q ss_pred cceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCccee
Q 015091 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFR 156 (413)
Q Consensus 81 ~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~ 156 (413)
.++|||+|||+++|+++|+++|++||.|..+++..++.+++++|||||+|.+.++|.+|++ +|+..|.|+.+.|+
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~ 76 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVR 76 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEE
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEE
Confidence 4789999999999999999999999999999999999999999999999999999999995 79999987665554
No 88
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.72 E-value=2.5e-18 Score=123.85 Aligned_cols=78 Identities=22% Similarity=0.372 Sum_probs=69.3
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEe-----eCCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEe
Q 015091 278 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-----PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352 (413)
Q Consensus 278 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~-----~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 352 (413)
.....++|||+|||.++++++|+++|+.||.|.++.+ .+.+++|||+|.+.++|.+||+ ||+..|+|+.|+|++
T Consensus 9 ~~~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ 87 (91)
T d1fjeb1 9 ESTTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEK 87 (91)
T ss_dssp SCSSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEEC
T ss_pred CCCCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEe
Confidence 3445679999999999999999999999998776665 4568999999999999999996 899999999999999
Q ss_pred ccCC
Q 015091 353 GRSP 356 (413)
Q Consensus 353 ~~~~ 356 (413)
++.+
T Consensus 88 ak~k 91 (91)
T d1fjeb1 88 PKGR 91 (91)
T ss_dssp CCCS
T ss_pred cCCC
Confidence 9863
No 89
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=2.5e-17 Score=119.23 Aligned_cols=85 Identities=19% Similarity=0.424 Sum_probs=77.2
Q ss_pred CCCCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceE
Q 015091 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247 (413)
Q Consensus 168 ~~~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~ 247 (413)
......++|||+|||.++++++|+++| +.||.|.++.++.+.. .++|||||+|.+.++|.+|++.|++..+.|+.|+
T Consensus 6 ~~~~~~~~l~v~nLp~~~t~~~L~~~F-~~~G~v~~v~~~~~~~--~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~ 82 (93)
T d2cq3a1 6 ESKSTPKRLHVSNIPFRFRDPDLRQMF-GQFGKILDVEIIFNER--GSKGFGFVTFENSADADRAREKLHGTVVEGRKIE 82 (93)
T ss_dssp CCSCCCCEEEEESCCTTCCHHHHHHHG-GGTSCEEEEEEECCTT--TTCCEEEEEESCHHHHHHHHHHHTTCEETTEECE
T ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHH-hhcceeeecccccccc--CCcceeEEEECCHHHHHHHHHHcCCCEECCEEEE
Confidence 445567789999999999999999999 8999999999988763 3689999999999999999999999999999999
Q ss_pred eccCCCCC
Q 015091 248 IGPATNKK 255 (413)
Q Consensus 248 v~~~~~~~ 255 (413)
|+++..+.
T Consensus 83 V~~A~~r~ 90 (93)
T d2cq3a1 83 VNNATARV 90 (93)
T ss_dssp EEECCSSC
T ss_pred EEecCcCC
Confidence 99998764
No 90
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=9e-18 Score=119.15 Aligned_cols=79 Identities=30% Similarity=0.580 Sum_probs=73.7
Q ss_pred EEecCCCCCCCHHHHHHHHhhhCCCccee-EEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccCCCC
Q 015091 176 IFVGDLAADVTDYMLQETFRARYPSTKGA-KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254 (413)
Q Consensus 176 l~v~~lp~~~~~~~l~~~f~~~~g~v~~~-~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~~~~ 254 (413)
|||+|||.++++++|+++| +.||.|..+ .++++..+++++|||||+|.+.++|.+|++.+++..+.|+.|+|.++..+
T Consensus 1 lfV~nLp~~~te~~l~~~F-~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k 79 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTF-SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK 79 (83)
T ss_dssp EEEECCCTTCCHHHHHHHH-HTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCC
T ss_pred CEEcCCCCcCcHHHHHHHH-HHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCC
Confidence 7999999999999999999 899998764 78888889999999999999999999999999999999999999998765
Q ss_pred C
Q 015091 255 K 255 (413)
Q Consensus 255 ~ 255 (413)
.
T Consensus 80 ~ 80 (83)
T d1x5ta1 80 D 80 (83)
T ss_dssp C
T ss_pred C
Confidence 4
No 91
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=1.2e-17 Score=122.87 Aligned_cols=82 Identities=22% Similarity=0.350 Sum_probs=76.9
Q ss_pred CceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccCC
Q 015091 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (413)
Q Consensus 173 ~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~~ 252 (413)
.++|||+|||+++++++|+++| +.||.|..+.|.++..++.++|||||+|.+.++|.+|+ +++++.|.|+.|.|.++.
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F-~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al-~~~~~~l~G~~i~V~~a~ 97 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYY-EQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAM-AARPHSIDGRVVEPKRAV 97 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHH-TSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHH-TSCSEEETTEEEEEECCS
T ss_pred CCEEEEeCCCCcCCHHHHHHHH-HhhCcccceeecccccCCCccCeEEEEECCHHHHHHHH-HhCCCeECCEEEEEEECc
Confidence 4689999999999999999999 89999999999999999999999999999999999999 689999999999999988
Q ss_pred CCCc
Q 015091 253 NKKT 256 (413)
Q Consensus 253 ~~~~ 256 (413)
.+..
T Consensus 98 ~ke~ 101 (103)
T d1x4ba1 98 AREE 101 (103)
T ss_dssp SCCC
T ss_pred ccCC
Confidence 7653
No 92
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=1.6e-17 Score=119.55 Aligned_cols=83 Identities=25% Similarity=0.452 Sum_probs=75.8
Q ss_pred CCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEec
Q 015091 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (413)
Q Consensus 170 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~ 249 (413)
....++|||+|||.++++++|+++| +.||.|.++.++.+..++ ++||||+|.+.++|..|++.+++..+.|+.|+|.
T Consensus 5 ~~~~~tl~V~nLp~~~te~~l~~~F-~~~G~i~~v~i~~d~~~~--~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~ 81 (90)
T d2cqia1 5 DGQPRTLYVGNLSRDVTEVLILQLF-SQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVN 81 (90)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHH-HHHSCEEEEEEECCCCSS--CCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHH-HhcCCceeeeeecccCcc--ceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 4556799999999999999999999 899999999999886554 7899999999999999999999999999999999
Q ss_pred cCCCCC
Q 015091 250 PATNKK 255 (413)
Q Consensus 250 ~~~~~~ 255 (413)
++....
T Consensus 82 ~a~~~~ 87 (90)
T d2cqia1 82 WATTPS 87 (90)
T ss_dssp ECCCTT
T ss_pred EcCCCC
Confidence 987654
No 93
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=2.6e-17 Score=117.74 Aligned_cols=78 Identities=14% Similarity=0.163 Sum_probs=71.6
Q ss_pred CCCCceEEEecCCCC-CCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHh--cCceeCCeeEEEEeccC
Q 015091 279 DPNNTTVFVGNLDSI-VTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML--NGTQLGGQNIRLSWGRS 355 (413)
Q Consensus 279 ~~~~~~l~v~nlp~~-~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l--~~~~~~g~~l~v~~~~~ 355 (413)
...+++|||+||+.. +|++||.++|+.||.|.++.+.+++++|||+|++.++|..|+..| ++..++|+.|+|+|++.
T Consensus 5 ~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s~~ 84 (89)
T d1x4da1 5 VETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQK 84 (89)
T ss_dssp CCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEECC
T ss_pred CCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeeccceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEECCC
Confidence 456789999999986 789999999999999999999999999999999999999999966 67789999999999975
Q ss_pred C
Q 015091 356 P 356 (413)
Q Consensus 356 ~ 356 (413)
.
T Consensus 85 ~ 85 (89)
T d1x4da1 85 Y 85 (89)
T ss_dssp C
T ss_pred c
Confidence 3
No 94
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=4.8e-18 Score=117.24 Aligned_cols=75 Identities=24% Similarity=0.406 Sum_probs=70.3
Q ss_pred eEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccC
Q 015091 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (413)
Q Consensus 175 ~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~ 251 (413)
+|||+|||+++|+++|+++| +.||.|.++.++.++.+++++|||||+|.+.++|++|+ +++++.++|+.|+|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F-~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al-~~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYF-GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM-EKKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHH-HHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHT-TCSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHH-HHhCCcccccccccccccccccEEEEEECCHHHHHHHH-hhCCCEECCEEeEEEEC
Confidence 58999999999999999999 89999999999999999999999999999999999999 46778899999998764
No 95
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=2e-17 Score=121.01 Aligned_cols=78 Identities=14% Similarity=0.233 Sum_probs=71.3
Q ss_pred CCCCceEEEecCCCC-CCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHH--HhcCceeCCeeEEEEeccC
Q 015091 279 DPNNTTVFVGNLDSI-VTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALR--MLNGTQLGGQNIRLSWGRS 355 (413)
Q Consensus 279 ~~~~~~l~v~nlp~~-~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~--~l~~~~~~g~~l~v~~~~~ 355 (413)
...+++|||+|||.+ +|+++|+++|+.||.|.++.+.+++++|||+|.+.++|.+|++ .+++..|+|+.|+|+|++.
T Consensus 15 ~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~~ 94 (99)
T d1x4fa1 15 QELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEK 94 (99)
T ss_dssp SCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEECS
T ss_pred CCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeecCCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcCC
Confidence 345689999999975 8999999999999999999999999999999999999999997 4678889999999999975
Q ss_pred C
Q 015091 356 P 356 (413)
Q Consensus 356 ~ 356 (413)
+
T Consensus 95 ~ 95 (99)
T d1x4fa1 95 Y 95 (99)
T ss_dssp C
T ss_pred c
Confidence 4
No 96
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=3.4e-17 Score=119.61 Aligned_cols=79 Identities=19% Similarity=0.429 Sum_probs=72.9
Q ss_pred CCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceeee
Q 015091 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (413)
Q Consensus 79 ~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~~ 158 (413)
.++++|||+|||.++++++|+++|++||.|.+|++.+++ +||||+|.+.++|.+|++.||+..|.+..+.++++
T Consensus 15 ~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~~------~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~ 88 (97)
T d1whya_ 15 NPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGD------SFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVD 88 (97)
T ss_dssp CCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSSS------CCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEE
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeeccc------cEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEE
Confidence 347899999999999999999999999999999997664 79999999999999999999999999988999999
Q ss_pred eccCC
Q 015091 159 WASFG 163 (413)
Q Consensus 159 ~~~~~ 163 (413)
|+...
T Consensus 89 ~ak~~ 93 (97)
T d1whya_ 89 FAKSG 93 (97)
T ss_dssp ECCCC
T ss_pred eCCCC
Confidence 98754
No 97
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=2.5e-17 Score=121.05 Aligned_cols=87 Identities=18% Similarity=0.322 Sum_probs=74.0
Q ss_pred CCCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCC----CC
Q 015091 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPN----GE 152 (413)
Q Consensus 77 ~~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~----~~ 152 (413)
...+.++|||+|||+++|+++|+++|+.||.|.++.++.++.+++++|||||+|.+.++|.+|++.+++..... .+
T Consensus 4 ~~~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~g 83 (98)
T d1x4ha1 4 DVTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDG 83 (98)
T ss_dssp CCCCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSS
T ss_pred CCCCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECC
Confidence 45678899999999999999999999999999999999999899999999999999999999999987543221 34
Q ss_pred cceeeeeccCC
Q 015091 153 QNFRLNWASFG 163 (413)
Q Consensus 153 ~~~~~~~~~~~ 163 (413)
+.+++.++..+
T Consensus 84 r~l~v~~a~~k 94 (98)
T d1x4ha1 84 RQLKVDLAVTR 94 (98)
T ss_dssp CEEEEECCCCC
T ss_pred EEEEEEECCCC
Confidence 56677766543
No 98
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=2.5e-17 Score=115.69 Aligned_cols=77 Identities=22% Similarity=0.398 Sum_probs=73.0
Q ss_pred CceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccC
Q 015091 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (413)
Q Consensus 173 ~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~ 251 (413)
.++|||+|||+++|+++|+++| +.||.|..+.+..+..++.++|||||+|.+.+++.+|+ ++++..|+|+.|+|+.|
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F-~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al-~~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYF-EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV-IQKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHH-TTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHH-HCSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHH-HHhccccccccccCCCCcccccEEEEEEcCHHHHHHHH-HhCCCEECCEEEEEEEC
Confidence 3689999999999999999999 89999999999999999999999999999999999999 68999999999999876
No 99
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=2.4e-17 Score=117.47 Aligned_cols=78 Identities=15% Similarity=0.368 Sum_probs=72.3
Q ss_pred EEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCC---CCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccCC
Q 015091 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTG---RTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (413)
Q Consensus 176 l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g---~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~~ 252 (413)
|||+|||.++++++|+++| +.||.|.++.++.+..++ .++|||||+|.+.++|.+|++.+++..++|+.|+|.++.
T Consensus 1 LfV~nLp~~~t~~~l~~~F-~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~ 79 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVF-SKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISE 79 (85)
T ss_dssp EEEESCCTTCCHHHHHHHH-HTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSS
T ss_pred CEEcCCCCCCCHHHHHHHH-HHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 7999999999999999999 899999999999887665 468999999999999999999999999999999999985
Q ss_pred CC
Q 015091 253 NK 254 (413)
Q Consensus 253 ~~ 254 (413)
..
T Consensus 80 ~~ 81 (85)
T d2cpfa1 80 RA 81 (85)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 100
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=7.1e-18 Score=116.15 Aligned_cols=69 Identities=26% Similarity=0.423 Sum_probs=66.1
Q ss_pred eeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCC
Q 015091 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152 (413)
Q Consensus 84 l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~ 152 (413)
|||+|||.++|+++|+++|+.||.|.++++.+++.+++++|||||+|.+.++|++|++.|||..+.++.
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~ 69 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQM 69 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEES
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEE
Confidence 799999999999999999999999999999999999999999999999999999999999999987654
No 101
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=4e-17 Score=121.84 Aligned_cols=84 Identities=12% Similarity=0.247 Sum_probs=75.7
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
+....+|||+||++++|+++|+++|+.||.|.+|++++++ ++|||||+|.+.++|++|++.||+..+.++.+.+++
T Consensus 4 ~s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~----~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v 79 (108)
T d2adba1 4 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN----NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRI 79 (108)
T ss_dssp CCCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEE
T ss_pred CCCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeC----CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEE
Confidence 4557789999999999999999999999999999999874 469999999999999999999999999888899999
Q ss_pred eeccCCCC
Q 015091 158 NWASFGAG 165 (413)
Q Consensus 158 ~~~~~~~~ 165 (413)
.++.....
T Consensus 80 ~~s~~~~~ 87 (108)
T d2adba1 80 DFSKLTSL 87 (108)
T ss_dssp EECSSCSC
T ss_pred EecCCccc
Confidence 98876543
No 102
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=6.5e-17 Score=118.99 Aligned_cols=77 Identities=26% Similarity=0.433 Sum_probs=70.3
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcce
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNF 155 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~ 155 (413)
..+.++|||+|||.++|+++|+++|+.||.|.++.+..+. +++++|||||+|.+.++|.+|++.|||..|.++.+.+
T Consensus 15 ~~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~-~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v 91 (101)
T d1x5oa1 15 EQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVS 91 (101)
T ss_dssp CCCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECS-SSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSC
T ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeeccc-ccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCcc
Confidence 4456899999999999999999999999999999999885 7899999999999999999999999999998766544
No 103
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=3.8e-17 Score=120.32 Aligned_cols=79 Identities=14% Similarity=0.211 Sum_probs=71.6
Q ss_pred CCCceEEEecCCCCC-CH----HHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEecc
Q 015091 280 PNNTTVFVGNLDSIV-TD----EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354 (413)
Q Consensus 280 ~~~~~l~v~nlp~~~-~~----~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~ 354 (413)
..+++|||+||..++ ++ ++|+++|+.||.|.++.+.+++++|||+|.+.++|.+|+..|||..|+|+.|+|.|++
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a~ 82 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKSFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQ 82 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEETTTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECCC
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEecCCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeecc
Confidence 356789999999876 33 5689999999999999999999999999999999999999999999999999999998
Q ss_pred CCCC
Q 015091 355 SPSN 358 (413)
Q Consensus 355 ~~~~ 358 (413)
....
T Consensus 83 ~~~~ 86 (104)
T d1weya_ 83 TLHI 86 (104)
T ss_dssp CSSC
T ss_pred cCCC
Confidence 6544
No 104
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=3.1e-17 Score=123.99 Aligned_cols=77 Identities=17% Similarity=0.254 Sum_probs=68.2
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
+..+++|||+|||.++|+++|+++|+.||.|.+|++..+ +.++|||||+|.+.++|..|++.|||..|.++.+.|..
T Consensus 4 p~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~---~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~ 80 (114)
T d2f9da1 4 PEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNT---PETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLY 80 (114)
T ss_dssp TTCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECS---TTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred cCCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeeccccc---CCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 345789999999999999999999999999999999754 56789999999999999999999999999776555543
No 105
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=1.7e-17 Score=115.45 Aligned_cols=73 Identities=21% Similarity=0.340 Sum_probs=68.2
Q ss_pred eeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCccee
Q 015091 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFR 156 (413)
Q Consensus 83 ~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~ 156 (413)
+|||+|||.++|+++|+++|+.||.|.++.++.++.++.+++||||+|.+.++|.+|++ +|+..+.++.+.|+
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~ 73 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECK 73 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEE
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEE
Confidence 58999999999999999999999999999999999999999999999999999999996 89999987666654
No 106
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=3.7e-17 Score=119.29 Aligned_cols=84 Identities=18% Similarity=0.230 Sum_probs=73.8
Q ss_pred cceeeecCCCCCCCHHHHHHHhhccCc-eEEEEEEecC-CCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceeee
Q 015091 81 IRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNK-QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (413)
Q Consensus 81 ~~~l~v~~lp~~~~~~~l~~~f~~~G~-v~~~~~~~~~-~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~~ 158 (413)
+|+|||+|||.++|+++|+++|+.||. |.+|+++++. .+++++|||||+|.+.++|..|++.|++..+...+..+++.
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~ 80 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVD 80 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEE
Confidence 478999999999999999999999996 9999999875 46889999999999999999999999877665556788899
Q ss_pred eccCCC
Q 015091 159 WASFGA 164 (413)
Q Consensus 159 ~~~~~~ 164 (413)
|+....
T Consensus 81 ~A~p~~ 86 (96)
T d2disa1 81 WAEPEI 86 (96)
T ss_dssp ESCSSC
T ss_pred EcCCCC
Confidence 986543
No 107
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=1.1e-17 Score=122.71 Aligned_cols=80 Identities=21% Similarity=0.339 Sum_probs=75.2
Q ss_pred CCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccC
Q 015091 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (413)
Q Consensus 172 ~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~ 251 (413)
..++|||+||+.++++++|+++| +.||.|.+++++++..+|+++|||||+|.+.++|.+|+ +|++..|.|+.|+|.++
T Consensus 17 ~~~tifV~nL~~~~te~~l~~~F-~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~-~l~g~~~~G~~l~V~~a 94 (101)
T d2cq4a1 17 DARTVFCMQLAARIRPRDLEDFF-SAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQAS 94 (101)
T ss_dssp HHTEEEEESCCTTCCHHHHHHHH-TTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHH-HHTTEEETTEEEEEEEH
T ss_pred CCCEEEEECCCCCCCHHHHHHHH-cCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHH-HHCCCEECCEEEEEEEC
Confidence 34689999999999999999999 89999999999999999999999999999999999999 59999999999999887
Q ss_pred CC
Q 015091 252 TN 253 (413)
Q Consensus 252 ~~ 253 (413)
..
T Consensus 95 ~~ 96 (101)
T d2cq4a1 95 QA 96 (101)
T ss_dssp HH
T ss_pred CC
Confidence 54
No 108
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.69 E-value=4.7e-17 Score=112.43 Aligned_cols=70 Identities=26% Similarity=0.348 Sum_probs=64.7
Q ss_pred ceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC----CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEec
Q 015091 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG----KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353 (413)
Q Consensus 283 ~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~----~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 353 (413)
++|||+|||.++++++|+++|+.||.|.++.+..+ +++|||+|.+.++|.+|+. ++++.|+|+.|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 47999999999999999999999999999999654 5699999999999999986 7999999999999864
No 109
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.69 E-value=7.2e-17 Score=114.20 Aligned_cols=78 Identities=15% Similarity=0.318 Sum_probs=68.1
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
.+++++|||+|||.++|+++|+++|+.||.|.+|++++++ +|||||+|.+.++|..|++.|+|..+.+ +..+++
T Consensus 5 ~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~-----~g~afV~f~~~~~A~~A~~~l~g~~~~~-~~~i~v 78 (83)
T d2b0ga1 5 QPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNR-----HDIAFVEFTTELQSNAAKEALQGFKITP-THAMKI 78 (83)
T ss_dssp CSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTT-----CSCEEEEESSHHHHHHHHHHHTTCBSST-TCBCEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeeccc-----ceeEEEecCCHHHHHHHHHHhCCcEeCC-CcEEEE
Confidence 4457899999999999999999999999999999997654 4899999999999999999999988854 345777
Q ss_pred eecc
Q 015091 158 NWAS 161 (413)
Q Consensus 158 ~~~~ 161 (413)
.|++
T Consensus 79 ~~ak 82 (83)
T d2b0ga1 79 TFAK 82 (83)
T ss_dssp EECC
T ss_pred EEec
Confidence 7764
No 110
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=6e-17 Score=114.95 Aligned_cols=72 Identities=17% Similarity=0.330 Sum_probs=66.9
Q ss_pred CceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC-----CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEecc
Q 015091 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG-----KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354 (413)
Q Consensus 282 ~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~-----~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~ 354 (413)
.++|||+|||.++|+++|+++|+.||.|.++.+.++ +|+|||+|.+.++|.+|++ +++..+.|+.|.|.|.+
T Consensus 6 ~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 6 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred cCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 478999999999999999999999999999999654 6899999999999999996 69999999999999965
No 111
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=2.6e-17 Score=118.18 Aligned_cols=80 Identities=31% Similarity=0.562 Sum_probs=73.7
Q ss_pred CceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccCC
Q 015091 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (413)
Q Consensus 173 ~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~~ 252 (413)
..+|||+|||.++++++|+++| +.||.|..+.++.+. +.++|||||+|.+.++|.+|++.|++..+.|+.|.|.++.
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F-~~~G~v~~~~i~~~~--~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~ 84 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTF-SAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 84 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHH-HTTSCEEEEEECCBT--TBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECC
T ss_pred CCEEEEeCCCCCCCHHHHHHHH-HhcCCceEEEEEeec--CCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 4579999999999999999999 899999999998875 3468999999999999999999999999999999999997
Q ss_pred CCC
Q 015091 253 NKK 255 (413)
Q Consensus 253 ~~~ 255 (413)
.++
T Consensus 85 ~~~ 87 (89)
T d1cvja2 85 SRK 87 (89)
T ss_dssp CTT
T ss_pred CCC
Confidence 654
No 112
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=1e-17 Score=124.10 Aligned_cols=79 Identities=24% Similarity=0.445 Sum_probs=71.2
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEee------CCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEec
Q 015091 280 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353 (413)
Q Consensus 280 ~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~------~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 353 (413)
.++++|||+|||.++++++|+++|+.||.|..+.+. +.+++|||+|.+.++|.+|++.|||..|.|+.|+|+|+
T Consensus 16 ~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~a 95 (102)
T d2cpxa1 16 EPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFG 95 (102)
T ss_dssp SCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeC
Confidence 356899999999999999999999999988766663 34789999999999999999999999999999999999
Q ss_pred cCCCC
Q 015091 354 RSPSN 358 (413)
Q Consensus 354 ~~~~~ 358 (413)
+++..
T Consensus 96 k~k~~ 100 (102)
T d2cpxa1 96 KNKKQ 100 (102)
T ss_dssp CCCSC
T ss_pred CCccc
Confidence 97654
No 113
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.68 E-value=3.4e-17 Score=113.85 Aligned_cols=75 Identities=24% Similarity=0.390 Sum_probs=71.3
Q ss_pred eEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccC
Q 015091 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (413)
Q Consensus 175 ~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~ 251 (413)
+|||+|||.++|+++|+++| +.||.+..+.++.+..++.+++||||+|.+.++|.+|++ ++++.++|+.|+|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F-~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYF-EQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHH-HTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHH-HHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 58999999999999999999 899999999999998899999999999999999999995 9999999999999875
No 114
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.68 E-value=3.5e-17 Score=117.28 Aligned_cols=70 Identities=23% Similarity=0.429 Sum_probs=64.6
Q ss_pred CceEEEecCCCCCCHHHH---HHHHhcCCCeEEEEeeCC---------CcEEEEEecCHHHHHHHHHHhcCceeCCeeEE
Q 015091 282 NTTVFVGNLDSIVTDEHL---RELFSQYGQLVHVKIPAG---------KRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 349 (413)
Q Consensus 282 ~~~l~v~nlp~~~~~~~l---~~~f~~~G~i~~v~~~~~---------~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~ 349 (413)
.++|||+|||.++++++| +++|++||.|.+|.+.++ +++|||+|++.++|.+|++.|||..|+|+.|+
T Consensus 8 ~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~lk 87 (89)
T d2cpia1 8 KNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLK 87 (89)
T ss_dssp SSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEEE
T ss_pred cCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEEE
Confidence 467999999999999999 678999999999999754 37899999999999999999999999999999
Q ss_pred EE
Q 015091 350 LS 351 (413)
Q Consensus 350 v~ 351 (413)
|+
T Consensus 88 vS 89 (89)
T d2cpia1 88 AS 89 (89)
T ss_dssp EE
T ss_pred EC
Confidence 85
No 115
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=7.3e-17 Score=117.29 Aligned_cols=76 Identities=20% Similarity=0.487 Sum_probs=68.1
Q ss_pred CcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceeeee
Q 015091 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (413)
Q Consensus 80 ~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~~~ 159 (413)
..++|||+|||.++++++|+++|+.||.|.+|++++++ |||||+|.+.++|.+|+..||+..+.+ ..+++.|
T Consensus 17 ~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~k------g~afV~f~~~~~A~~Ai~~l~~~~i~g--~~l~v~~ 88 (96)
T d1x4ga1 17 KNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK------GYSFVRFSTHESAAHAIVSVNGTTIEG--HVVKCYW 88 (96)
T ss_dssp SCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETTT------TEEEEEESSHHHHHHHHHHHTTCEETT--EECEEEC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEecc------eEEEEEECCHHHHHHHHHHhCCCEECC--EEEEEEE
Confidence 46789999999999999999999999999999999775 899999999999999999999999955 5667777
Q ss_pred ccCC
Q 015091 160 ASFG 163 (413)
Q Consensus 160 ~~~~ 163 (413)
+...
T Consensus 89 ak~~ 92 (96)
T d1x4ga1 89 GKES 92 (96)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 6543
No 116
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=6.3e-17 Score=114.84 Aligned_cols=76 Identities=14% Similarity=0.222 Sum_probs=68.3
Q ss_pred CcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 80 ~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
..++|||+|||.++|+++|+++|+.||.|.+|++.++. +|+++|||||+|.+.++|.+|++ +++..+.++.+.|+.
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~-~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~ 80 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTL-HKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILF 80 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECT-TCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEE
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeec-cCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEE
Confidence 46899999999999999999999999999999998876 79999999999999999999995 699998776555543
No 117
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=9.7e-17 Score=118.51 Aligned_cols=86 Identities=23% Similarity=0.303 Sum_probs=76.9
Q ss_pred CCCCceEEecCCCCCCCHHHHHHHHhhhCCCcc--------eeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccc
Q 015091 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTK--------GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241 (413)
Q Consensus 170 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~--------~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~ 241 (413)
....++|||+|||.++++++|+++| +.||.|. .+.+..+..+++++|||||+|.+.++|.+|++.|++..+
T Consensus 5 ~~~~~~i~V~nLp~~~te~~l~~~F-~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~ 83 (101)
T d2cpea1 5 DSDNSAIYVQGLNDSVTLDDLADFF-KQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDF 83 (101)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHH-TTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCcCCHHHHHHHH-HHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEE
Confidence 4567899999999999999999999 8999874 455666777899999999999999999999999999999
Q ss_pred cCcceEeccCCCCCc
Q 015091 242 STRPMRIGPATNKKT 256 (413)
Q Consensus 242 ~g~~i~v~~~~~~~~ 256 (413)
.|+.|+|.++..+..
T Consensus 84 ~gr~i~V~~a~~~~p 98 (101)
T d2cpea1 84 QGSKLKVSLARKKPP 98 (101)
T ss_dssp TTEECEEECSSCCCC
T ss_pred CCEEEEEEEcCCCCC
Confidence 999999999987543
No 118
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=9.9e-17 Score=116.96 Aligned_cols=77 Identities=23% Similarity=0.420 Sum_probs=67.8
Q ss_pred CceEEEecCCCCCCHHHHHHHHhcCCC-eEEEEeeC-------CCcEEEEEecCHHHHHHHHHHhcCc--eeCCeeEEEE
Q 015091 282 NTTVFVGNLDSIVTDEHLRELFSQYGQ-LVHVKIPA-------GKRCGFVQFADRSCAEEALRMLNGT--QLGGQNIRLS 351 (413)
Q Consensus 282 ~~~l~v~nlp~~~~~~~l~~~f~~~G~-i~~v~~~~-------~~~~afV~f~~~~~a~~a~~~l~~~--~~~g~~l~v~ 351 (413)
+++|||+|||.++++++|+++|+.||. |.++.+.+ ++|+|||+|.+.++|.+|++.|++. .++|+.|+|+
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~ 80 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVD 80 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEE
Confidence 368999999999999999999999995 99999854 3679999999999999999998654 4689999999
Q ss_pred eccCCCC
Q 015091 352 WGRSPSN 358 (413)
Q Consensus 352 ~~~~~~~ 358 (413)
||+++..
T Consensus 81 ~A~p~~~ 87 (96)
T d2disa1 81 WAEPEID 87 (96)
T ss_dssp ESCSSCS
T ss_pred EcCCCCC
Confidence 9987544
No 119
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=2.5e-17 Score=121.94 Aligned_cols=86 Identities=27% Similarity=0.459 Sum_probs=80.3
Q ss_pred CCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEec
Q 015091 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (413)
Q Consensus 170 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~ 249 (413)
..++++|||+|||.++++++|+++| +.||.|..+.++.+..++++++||||+|.+.++|..|++.|++..+.|+.|+|.
T Consensus 15 ~~ps~tl~V~nLp~~~t~~~l~~~f-~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~ 93 (102)
T d2cpxa1 15 GEPNKVLYLKNLSPRVTERDLVSLF-ARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIE 93 (102)
T ss_dssp CSCCSEEEEECCCTTCCHHHHHHHT-HHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHH-hhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEE
Confidence 3467899999999999999999999 899999999999988899999999999999999999999999999999999999
Q ss_pred cCCCCCc
Q 015091 250 PATNKKT 256 (413)
Q Consensus 250 ~~~~~~~ 256 (413)
++..++.
T Consensus 94 ~ak~k~~ 100 (102)
T d2cpxa1 94 FGKNKKQ 100 (102)
T ss_dssp ECCCCSC
T ss_pred eCCCccc
Confidence 9987654
No 120
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=2e-16 Score=117.05 Aligned_cols=79 Identities=23% Similarity=0.270 Sum_probs=67.9
Q ss_pred CCCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEe-eC-----CCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEe
Q 015091 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-PA-----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352 (413)
Q Consensus 279 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~-~~-----~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 352 (413)
.....+|||+|||++++++||+++|+.+|.|..+.+ .. .+|+|||+|.+.++|.+|++ +|+..|+||.|+|.+
T Consensus 12 ~~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~ 90 (104)
T d1wg5a_ 12 TANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFK 90 (104)
T ss_dssp CSCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEE
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEE
Confidence 345568999999999999999999999998876444 22 26899999999999999996 899999999999999
Q ss_pred ccCCCC
Q 015091 353 GRSPSN 358 (413)
Q Consensus 353 ~~~~~~ 358 (413)
++....
T Consensus 91 ~~~~~~ 96 (104)
T d1wg5a_ 91 SSRAEV 96 (104)
T ss_dssp ECTTTS
T ss_pred CCHHHh
Confidence 886543
No 121
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=1.4e-16 Score=117.37 Aligned_cols=79 Identities=18% Similarity=0.227 Sum_probs=67.5
Q ss_pred CCCCCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC-----CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEE
Q 015091 277 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG-----KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351 (413)
Q Consensus 277 ~~~~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~-----~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~ 351 (413)
.......+|||+|||+++|++||+++|+.||.+ +|.+..+ +++|||+|.+.++|++|++ +|+..|+||.|+|.
T Consensus 10 ~~~~~~~~v~v~nLp~~~te~dl~~~F~~~~~~-~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~ 87 (102)
T d1weza_ 10 FQSTTGHCVHMRGLPYRATENDIYNFFSPLNPM-RVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELF 87 (102)
T ss_dssp CCCSSSCEEEEESCCTTCCHHHHHHSSCSCCCS-EEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEE
T ss_pred CcCCCCCEEEEeCCCCcCCHHHHHHHHhccCcc-eeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEE
Confidence 344566899999999999999999999999855 4544332 6899999999999999986 89999999999999
Q ss_pred eccCCC
Q 015091 352 WGRSPS 357 (413)
Q Consensus 352 ~~~~~~ 357 (413)
++..+.
T Consensus 88 ~s~~~~ 93 (102)
T d1weza_ 88 LNSTAG 93 (102)
T ss_dssp EECCCC
T ss_pred EcCCCC
Confidence 988654
No 122
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.67 E-value=1.8e-17 Score=119.25 Aligned_cols=84 Identities=18% Similarity=0.355 Sum_probs=75.4
Q ss_pred CCCCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceE
Q 015091 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247 (413)
Q Consensus 168 ~~~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~ 247 (413)
.+....++|||+|||.++++++|+++| +.||.|..+.++.+ .+|+++|||||+|.+.++|.+|+ ++++..+.|+.|+
T Consensus 8 ~~~~~~~~ifV~nL~~~~te~~l~~~F-~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al-~~~g~~~~g~~i~ 84 (91)
T d1fjeb1 8 SESTTPFNLFIGNLNPNKSVAELKVAI-SELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKAL-ELTGLKVFGNEIK 84 (91)
T ss_dssp SSCSSSEEEEEECCCTTSCHHHHHHHH-HHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHH-HGGGEEETTEEEE
T ss_pred CCCCCCcEEEEeCccCcchHHHHHHHH-hcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHH-hcCCcEECCEEEE
Confidence 345567799999999999999999999 89999999988654 58999999999999999999999 5999999999999
Q ss_pred eccCCCC
Q 015091 248 IGPATNK 254 (413)
Q Consensus 248 v~~~~~~ 254 (413)
|.++..+
T Consensus 85 V~~ak~k 91 (91)
T d1fjeb1 85 LEKPKGR 91 (91)
T ss_dssp EECCCCS
T ss_pred EEecCCC
Confidence 9998653
No 123
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=1.2e-16 Score=119.20 Aligned_cols=77 Identities=23% Similarity=0.356 Sum_probs=69.6
Q ss_pred CCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeC--CCcEEEEEecCHHHHHHHHHHhcCcee--CCeeEEEEeccCC
Q 015091 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA--GKRCGFVQFADRSCAEEALRMLNGTQL--GGQNIRLSWGRSP 356 (413)
Q Consensus 281 ~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~--~~~~afV~f~~~~~a~~a~~~l~~~~~--~g~~l~v~~~~~~ 356 (413)
...+|||+||+..+|+++|+++|++||.|.++.+.. ++++|||+|.+.++|.+|+..|||..| .++.|+|.|++..
T Consensus 6 ~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~~~ 85 (108)
T d2adba1 6 PVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLT 85 (108)
T ss_dssp CEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECSSC
T ss_pred CeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecCCc
Confidence 457899999999999999999999999999988854 578999999999999999999999998 5789999998764
Q ss_pred C
Q 015091 357 S 357 (413)
Q Consensus 357 ~ 357 (413)
.
T Consensus 86 ~ 86 (108)
T d2adba1 86 S 86 (108)
T ss_dssp S
T ss_pred c
Confidence 4
No 124
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=1.2e-16 Score=117.61 Aligned_cols=83 Identities=17% Similarity=0.402 Sum_probs=75.5
Q ss_pred CCCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEe
Q 015091 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248 (413)
Q Consensus 169 ~~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v 248 (413)
.....++|||+|||.++++++|+++| +.||.|..+.+..+. ++.++|||||+|.+.++|.+|++.|||..+.|+.+.|
T Consensus 14 ~~~~~~~lfV~nLp~~~te~~L~~~F-~~~G~i~~~~~~~~~-~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v 91 (101)
T d1x5oa1 14 QEQDPTNLYISNLPLSMDEQELENML-KPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVS 91 (101)
T ss_dssp CCCCTTEEEEESCCTTCCHHHHHHTT-TTTSCEEEEEEEECS-SSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSC
T ss_pred ccCCCCEEEEeCCCCCCCHHHHHHHH-hhcccccceeeeccc-ccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCcc
Confidence 34556789999999999999999999 899999999988875 7899999999999999999999999999999999998
Q ss_pred ccCCC
Q 015091 249 GPATN 253 (413)
Q Consensus 249 ~~~~~ 253 (413)
.++.+
T Consensus 92 ~~~~P 96 (101)
T d1x5oa1 92 APTEP 96 (101)
T ss_dssp CCSSC
T ss_pred CCCCC
Confidence 77643
No 125
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=1.2e-16 Score=116.16 Aligned_cols=79 Identities=14% Similarity=0.241 Sum_probs=68.1
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
.+..++|||+|||.++|+++|+++|+.||.|..+.+..+ +.+++||||+|.+.++|.+|++.||+..+.++. +++
T Consensus 11 ~~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~--l~V 85 (95)
T d1x4aa1 11 GNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYR--LRV 85 (95)
T ss_dssp CCCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEE--CEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEECCEE--EEE
Confidence 456778999999999999999999999999999987543 457899999999999999999999999997654 555
Q ss_pred eecc
Q 015091 158 NWAS 161 (413)
Q Consensus 158 ~~~~ 161 (413)
.|+.
T Consensus 86 ~~a~ 89 (95)
T d1x4aa1 86 EFPR 89 (95)
T ss_dssp ECCC
T ss_pred Eecc
Confidence 5554
No 126
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.66 E-value=4.9e-17 Score=115.84 Aligned_cols=81 Identities=19% Similarity=0.366 Sum_probs=69.9
Q ss_pred CCceEEecCCCCCCC-HHHHHHHHhhhCCCcceeEEEEc-CCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEec
Q 015091 172 PDHTIFVGDLAADVT-DYMLQETFRARYPSTKGAKVVID-RLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (413)
Q Consensus 172 ~~~~l~v~~lp~~~~-~~~l~~~f~~~~g~v~~~~~~~~-~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~ 249 (413)
..++|||+|||.+++ +++|+++| +.||.|.++++..+ ..+++++|||||+|.+.++|++|+ ++|+..++|+.|+|+
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F-~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al-~~n~~~~~gr~l~V~ 80 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESF-EGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERAL-QMNRSLLGNREISVS 80 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHH-GGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHG-GGTTEEETTEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHH-HhhhhccceeeecccCCccccceeeeEEECCHHHHHHHH-hcCCCEECCEEEEEE
Confidence 357999999999986 56699999 89999999998764 567899999999999999999999 599999999999999
Q ss_pred cCCCC
Q 015091 250 PATNK 254 (413)
Q Consensus 250 ~~~~~ 254 (413)
++..+
T Consensus 81 ~a~~k 85 (86)
T d2ghpa3 81 LADKK 85 (86)
T ss_dssp ECCCC
T ss_pred EcCCC
Confidence 98764
No 127
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.66 E-value=4.3e-17 Score=116.79 Aligned_cols=74 Identities=12% Similarity=0.219 Sum_probs=66.2
Q ss_pred CcceeeecCCCCCCCHHHH---HHHhhccCceEEEEEEecCCCCCc---ccEEEEEEcCHHHHHHHHHHhCCCcCCCCCc
Q 015091 80 EIRTLWIGDLQYWMDETYL---NTCFAHTGEVVAVKVIRNKQTGQI---EGYGFIEFISRAGAERVLQTFNGTPMPNGEQ 153 (413)
Q Consensus 80 ~~~~l~v~~lp~~~~~~~l---~~~f~~~G~v~~~~~~~~~~~g~~---~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~ 153 (413)
..++|||+|||+++++++| +++|++||.|.+|.+++++.++.+ +|||||+|.+.++|.+|++.|||..+.++.+
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 4568999999999999999 678999999999999999877665 4899999999999999999999999976543
No 128
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.65 E-value=2.5e-16 Score=112.35 Aligned_cols=80 Identities=18% Similarity=0.200 Sum_probs=71.7
Q ss_pred CCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEecc
Q 015091 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (413)
Q Consensus 171 ~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~ 250 (413)
...++|||+|||.++++++|+++| +.||.+....++.+..+++++|+|||+|.+.++|.+|++.||+..+.|+.|+|..
T Consensus 7 p~~~~l~v~nLp~~~~~~di~~~F-~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l 85 (86)
T d2cqpa1 7 PGPTIIKVQNMPFTVSIDEILDFF-YGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVL 85 (86)
T ss_dssp CSSEEEEEESCCTTCCHHHHHHHT-TTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHH-hhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEE
Confidence 345679999999999999999999 8999998765555556899999999999999999999999999999999999976
Q ss_pred C
Q 015091 251 A 251 (413)
Q Consensus 251 ~ 251 (413)
+
T Consensus 86 ~ 86 (86)
T d2cqpa1 86 G 86 (86)
T ss_dssp S
T ss_pred C
Confidence 4
No 129
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.65 E-value=1.8e-16 Score=112.75 Aligned_cols=76 Identities=24% Similarity=0.433 Sum_probs=67.0
Q ss_pred CcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceeeee
Q 015091 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (413)
Q Consensus 80 ~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~~~ 159 (413)
..++|||+|||.++++++|+++|+.||.|.+|++.+++ +||||+|.+.++|.+|++.|||..+.++ .+++.|
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~k------~~afV~f~~~~~A~~A~~~l~g~~i~g~--~l~V~~ 78 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLETRTLAEIAKVELDNMPLRGK--QLRVRF 78 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETTT------TEEEEECSSSHHHHHHHHHHTTCCBTTB--CCEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeeccc------ceEEEEECCHHHHHHHHHHhCCCEECCE--EEEEEE
Confidence 45689999999999999999999999999999998765 8999999999999999999999999765 555556
Q ss_pred ccCC
Q 015091 160 ASFG 163 (413)
Q Consensus 160 ~~~~ 163 (413)
+..+
T Consensus 79 A~~~ 82 (86)
T d2cpja1 79 ACHS 82 (86)
T ss_dssp SSCC
T ss_pred CCCc
Confidence 5543
No 130
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.65 E-value=9.8e-17 Score=114.52 Aligned_cols=78 Identities=13% Similarity=0.199 Sum_probs=67.1
Q ss_pred CcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 80 ~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
...+|||+|||.++++++|+++|+.||.+.++.++.+..+++++|+|||+|.+.++|.+|++.||+..+.++.+.|++
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l 85 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVL 85 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEE
Confidence 356799999999999999999999999987754444446899999999999999999999999999999776655543
No 131
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=2.7e-16 Score=112.19 Aligned_cols=68 Identities=18% Similarity=0.272 Sum_probs=62.1
Q ss_pred eeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 83 ~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
+|||+|||+++|+++|+++|+.||.|.+|++.++ |||||+|.+.++|++|++.|||..+.++.+.+..
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~-------g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~ 69 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-------GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAY 69 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT-------SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCB
T ss_pred eEEEECCCCcCCHHHHHHHHhhhccccccccccc-------ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeE
Confidence 6999999999999999999999999999998654 7999999999999999999999999887765543
No 132
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.64 E-value=2.6e-16 Score=108.62 Aligned_cols=72 Identities=18% Similarity=0.226 Sum_probs=63.3
Q ss_pred ceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCccee
Q 015091 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFR 156 (413)
Q Consensus 82 ~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~ 156 (413)
.+|||+|||+++++++|+++|+.||.|.+|++..++. ..++||||+|.+.++|.+|+. +|+..|.++.+.|+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~--~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~ 72 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLK--KNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVS 72 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTT--SSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeecc--ccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEE
Confidence 4799999999999999999999999999999999874 345799999999999999994 79999877654443
No 133
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=3.3e-16 Score=109.52 Aligned_cols=74 Identities=20% Similarity=0.384 Sum_probs=64.7
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
+...++|||+||+ +|+++|+++|++||.|.+|++.+++ +||||+|.+.++|.+|++.|||..+.++ .+++
T Consensus 2 p~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~~------~~afV~f~~~~~A~~Ai~~lng~~~~g~--~l~V 71 (79)
T d2bz2a1 2 PRKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPPR------NCAFVTYEKMESADQAVAELNGTQVESV--QLKV 71 (79)
T ss_dssp CCCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETTT------TEEEEECSSHHHHHHHHHHHTTCBCSSC--BCEE
T ss_pred CCCCCEEEEECCC--CCHHHHHHHHhccCccceeeeccCC------CEEEEEEcccHHHHHHHHHhCCCEECCE--EEEE
Confidence 4567899999995 8999999999999999999997654 8999999999999999999999999665 5566
Q ss_pred eecc
Q 015091 158 NWAS 161 (413)
Q Consensus 158 ~~~~ 161 (413)
.|+.
T Consensus 72 ~~a~ 75 (79)
T d2bz2a1 72 NIAR 75 (79)
T ss_dssp EECC
T ss_pred EEec
Confidence 6654
No 134
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=4.1e-16 Score=115.59 Aligned_cols=85 Identities=25% Similarity=0.418 Sum_probs=73.6
Q ss_pred CCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcC-CCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEe
Q 015091 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR-LTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248 (413)
Q Consensus 170 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~-~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v 248 (413)
..+.++|||+|||+++++++|+++| +.|| +..+.++.+. .+++++|||||+|.+.++|++|+ +|++..|.|+.|+|
T Consensus 12 ~~p~~~v~V~nLp~~~te~~l~~~f-~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V 88 (104)
T d1wi8a_ 12 KSPPYTAFLGNLPYDVTEESIKEFF-RGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRV 88 (104)
T ss_dssp SSSCEEEEEESCCSSCCHHHHHHHT-TTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHH-HHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEE
Confidence 4567899999999999999999999 8998 6677776654 46889999999999999998777 79999999999999
Q ss_pred ccCCCCCcc
Q 015091 249 GPATNKKTV 257 (413)
Q Consensus 249 ~~~~~~~~~ 257 (413)
.++..+...
T Consensus 89 ~~a~~~~~~ 97 (104)
T d1wi8a_ 89 DVADQAQDK 97 (104)
T ss_dssp EECCCCCCC
T ss_pred EECCCCCCC
Confidence 998776543
No 135
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.64 E-value=1e-15 Score=111.54 Aligned_cols=74 Identities=16% Similarity=0.224 Sum_probs=66.2
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
....++|||+|||+++++++|+++|+.||.|++|++.++ |||||+|.+.++|++|++.||+..|.++.+.+..
T Consensus 12 ~~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~~-------g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~ 84 (98)
T d1wg4a_ 12 RRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD-------GMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSY 84 (98)
T ss_dssp CSCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEETT-------TEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHhhccccccccccc-------ceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEE
Confidence 345678999999999999999999999999999998643 8999999999999999999999999887776655
Q ss_pred e
Q 015091 158 N 158 (413)
Q Consensus 158 ~ 158 (413)
.
T Consensus 85 ~ 85 (98)
T d1wg4a_ 85 I 85 (98)
T ss_dssp E
T ss_pred E
Confidence 4
No 136
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.64 E-value=2.7e-16 Score=114.52 Aligned_cols=83 Identities=18% Similarity=0.315 Sum_probs=73.6
Q ss_pred CCCCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceE
Q 015091 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247 (413)
Q Consensus 168 ~~~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~ 247 (413)
......++|||+||+.++++++|+++| +.||.|..+.. ++.+++||||+|.+.++|.+|++.|++..+.|+.|+
T Consensus 11 ~~~~~~~~l~V~nL~~~~te~~l~~~F-~~~g~v~~~~~-----~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~ 84 (96)
T d1fjca_ 11 KKVRAARTLLAKNLSFNITEDELKEVF-EDALEIRLVSQ-----DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVS 84 (96)
T ss_dssp STTTGGGEEEEESCCSSCCHHHHHHHH-CSEEEECCEEE-----TTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEE
T ss_pred CcCCCCCEEEEeCCCCCCCHHHHHHHH-Hhcccceeeee-----cCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEE
Confidence 344567899999999999999999999 88998765542 678899999999999999999999999999999999
Q ss_pred eccCCCCCc
Q 015091 248 IGPATNKKT 256 (413)
Q Consensus 248 v~~~~~~~~ 256 (413)
|.++..+..
T Consensus 85 V~~a~~k~~ 93 (96)
T d1fjca_ 85 LYYTGEKGG 93 (96)
T ss_dssp EEECSSSCC
T ss_pred EEEeCCCCC
Confidence 999988654
No 137
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=3.5e-16 Score=117.69 Aligned_cols=76 Identities=13% Similarity=0.138 Sum_probs=66.1
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
.+..++|||+|||.++++++|+++|+.||.|.+|.|.. +++||||+|.+.++|.+|++.|||..|.++.+ .+
T Consensus 7 ~r~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~~------~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l--~v 78 (111)
T d1whxa_ 7 GRSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPE------GGITAIVEFLEPLEARKAFRHLAYSKFHHVPL--YL 78 (111)
T ss_dssp SEEEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECCS------SSSCEEEEESCHHHHHHHHHHHTTCBSSSSBC--EE
T ss_pred CCCCCEEEEECCCCCCCHHHHHhhhhccCCccEEEeec------cCceEEEEEcCHHHHHHHHHHHcCCccCCCeE--EE
Confidence 45668999999999999999999999999999998843 45899999999999999999999999977555 45
Q ss_pred eecc
Q 015091 158 NWAS 161 (413)
Q Consensus 158 ~~~~ 161 (413)
.|+.
T Consensus 79 ~~a~ 82 (111)
T d1whxa_ 79 EWAP 82 (111)
T ss_dssp EEEE
T ss_pred EECC
Confidence 5554
No 138
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=3.2e-16 Score=109.79 Aligned_cols=76 Identities=24% Similarity=0.444 Sum_probs=69.0
Q ss_pred ceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCc-cccCcceEeccCC
Q 015091 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV-FCSTRPMRIGPAT 252 (413)
Q Consensus 174 ~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~-~~~g~~i~v~~~~ 252 (413)
++|||+|||.++++++|+++| +.||.|.++.+... +|||||+|.+.++|.+|++.|++. .+.|+.|+|.++.
T Consensus 2 n~l~V~nLp~~~te~~L~~~F-~~~G~i~~~~~~~~------rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~ 74 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLF-GDRKLPLAGQVLLK------SGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSV 74 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHH-HHTTCCCSSCEEEE------TTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECC
T ss_pred CEEEEECCCCCCCHHHHHHHH-HHhCcEEEeEEecc------cceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcC
Confidence 479999999999999999999 89999988877654 789999999999999999999986 5999999999998
Q ss_pred CCCc
Q 015091 253 NKKT 256 (413)
Q Consensus 253 ~~~~ 256 (413)
++..
T Consensus 75 ~k~~ 78 (80)
T d2cqha1 75 SKKL 78 (80)
T ss_dssp CCCC
T ss_pred CcCc
Confidence 7654
No 139
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=1.1e-16 Score=109.96 Aligned_cols=71 Identities=25% Similarity=0.440 Sum_probs=68.2
Q ss_pred EEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceE
Q 015091 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247 (413)
Q Consensus 176 l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~ 247 (413)
|||+|||.++++++|+++| +.||.|..+++..+..++.++|+|||+|.+.++|.+|++.||+..+.|+.++
T Consensus 1 lyV~nLp~~~te~~l~~~F-~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLC-QPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTS-TTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHH-hhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 7999999999999999999 8999999999999999999999999999999999999999999999998774
No 140
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=6.9e-16 Score=114.14 Aligned_cols=88 Identities=15% Similarity=0.179 Sum_probs=78.0
Q ss_pred CCCCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceE
Q 015091 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247 (413)
Q Consensus 168 ~~~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~ 247 (413)
.......+|||+|||+++++++|+++| +.+|.+....++.+..++.++|||||+|.+.++|++|+ ++++..|.|+.|+
T Consensus 10 ~~~~~~~~v~v~nLP~~~te~dI~~~F-~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~-~~~~~~i~gR~i~ 87 (104)
T d1wg5a_ 10 PDTANDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKAL-KKHKERIGHRYIE 87 (104)
T ss_dssp SSCSCCCEEEEESCCTTCCHHHHHHHT-TTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHH-TTTTCCSSSSCCE
T ss_pred CCCCCCcEEEEeCCCCCCCHHHHHHHH-HhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHH-hhCCCEEcceEEE
Confidence 345566689999999999999999999 89999888777777778999999999999999999999 5999999999999
Q ss_pred eccCCCCCcc
Q 015091 248 IGPATNKKTV 257 (413)
Q Consensus 248 v~~~~~~~~~ 257 (413)
|..+...+..
T Consensus 88 V~~~~~~~~~ 97 (104)
T d1wg5a_ 88 IFKSSRAEVR 97 (104)
T ss_dssp EEEECTTTSC
T ss_pred EEECCHHHhc
Confidence 9998876543
No 141
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=1.7e-15 Score=111.93 Aligned_cols=82 Identities=15% Similarity=0.096 Sum_probs=69.5
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
..++++|||+|||.++|+++|+++|+.||.|.+|++.+++ ++|||+|.+.++|+.|++.+++..+......+++
T Consensus 12 ~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~k------~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v 85 (104)
T d1wexa_ 12 VSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPFK------RQALVEFENIDSAKECVTFAADVPVYIAGQQAFF 85 (104)
T ss_dssp CCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETTT------TEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEecc------eeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEE
Confidence 4568899999999999999999999999999999998654 8999999999999999998866555445667777
Q ss_pred eeccCCCC
Q 015091 158 NWASFGAG 165 (413)
Q Consensus 158 ~~~~~~~~ 165 (413)
.|+.....
T Consensus 86 ~~s~~~~~ 93 (104)
T d1wexa_ 86 NYSTSKRI 93 (104)
T ss_dssp EECSSSSC
T ss_pred EEcCCCcc
Confidence 77765543
No 142
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=6.9e-16 Score=115.57 Aligned_cols=74 Identities=19% Similarity=0.299 Sum_probs=65.0
Q ss_pred cceeeecCCCC-CCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceeeee
Q 015091 81 IRTLWIGDLQY-WMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (413)
Q Consensus 81 ~~~l~v~~lp~-~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~~~ 159 (413)
+++|||+||++ .+|+++|+++|+.||.|.+|+|++++ +|||||+|.+.++|.+|++.|||..|.++. +++.+
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~-----kg~afV~f~~~~~A~~ai~~lng~~l~g~~--l~v~~ 74 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK-----KENALVQMADGNQAQLAMSHLNGHKLHGKP--IRITL 74 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTT-----SCCEEEEESCHHHHHHHHHHHTTCBCSSSB--CEEEC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEE--EEEEE
Confidence 57999999965 59999999999999999999998875 489999999999999999999999997764 55555
Q ss_pred cc
Q 015091 160 AS 161 (413)
Q Consensus 160 ~~ 161 (413)
+.
T Consensus 75 s~ 76 (109)
T d2adca1 75 SK 76 (109)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 143
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=1.3e-15 Score=109.09 Aligned_cols=78 Identities=12% Similarity=0.264 Sum_probs=69.3
Q ss_pred CCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccc-cCcceEec
Q 015091 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC-STRPMRIG 249 (413)
Q Consensus 171 ~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~-~g~~i~v~ 249 (413)
.++++|||+|||.++++++|+++| +.||.|..+.+.. ++.++||||+|.+.++|.+|+..|++..+ +|+.|+|.
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F-~~~G~v~~~~~~~----~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~ 82 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLF-SSNGGVVKGFKFF----QKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVS 82 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHH-HTTSCCEEEEEEC----SSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHh-hccCCEEEEEEee----ecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEE
Confidence 457899999999999999999999 8999998776653 34588999999999999999999999887 58999999
Q ss_pred cCCC
Q 015091 250 PATN 253 (413)
Q Consensus 250 ~~~~ 253 (413)
++..
T Consensus 83 ~sk~ 86 (88)
T d2adca2 83 FSKS 86 (88)
T ss_dssp ECSS
T ss_pred eCCC
Confidence 9865
No 144
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=7.4e-16 Score=110.27 Aligned_cols=79 Identities=16% Similarity=0.231 Sum_probs=66.5
Q ss_pred CCCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhC--CCcCCCCCcc
Q 015091 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN--GTPMPNGEQN 154 (413)
Q Consensus 77 ~~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~--g~~~~~~~~~ 154 (413)
...++++|||+|||.++++++|+++|+.||.|.++++.+++ +||||+|.+.++|.+|++.++ +..+. +..
T Consensus 4 ~~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~~------~~afV~f~~~e~A~~a~~~~~~~~~~~~--g~~ 75 (88)
T d2cq1a1 4 DGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGK------NQAFLELATEEAAITMVNYYSAVTPHLR--NQP 75 (88)
T ss_dssp CSSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETTT------TEEEEEESSHHHHHHHHHHHHHSCCEET--TEE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHhcccccccccccccc------eEEEEEeCCHHHHHHHHHHHccCCCccC--CCE
Confidence 35678999999999999999999999999999999998765 899999999999999998764 45564 456
Q ss_pred eeeeeccCC
Q 015091 155 FRLNWASFG 163 (413)
Q Consensus 155 ~~~~~~~~~ 163 (413)
+++.|++.+
T Consensus 76 l~v~~sk~~ 84 (88)
T d2cq1a1 76 IYIQYSNHK 84 (88)
T ss_dssp CEEEECSCS
T ss_pred EEEEECCCC
Confidence 666666543
No 145
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1e-15 Score=111.50 Aligned_cols=77 Identities=23% Similarity=0.442 Sum_probs=68.8
Q ss_pred CCCCceEEecCCC-CCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEe
Q 015091 170 DTPDHTIFVGDLA-ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248 (413)
Q Consensus 170 ~~~~~~l~v~~lp-~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v 248 (413)
....++|||+||+ ..+++++|+++| +.||.|.++.+ ++|||||+|.+.++|++|++.||+..+.|+.|+|
T Consensus 12 ~~~~~~lfV~nL~~~~~~~~~L~~~F-~~~G~i~~~~i--------~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V 82 (98)
T d1wf2a_ 12 RSMNSRVFIGNLNTLVVKKSDVEAIF-SKYGKIVGCSV--------HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDI 82 (98)
T ss_dssp SSCCCCEEEEEECTTTCCHHHHHHSS-TTSSCEEEEEE--------ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEE
T ss_pred CCCCcEEEEeCCCcccCCHHHHHHHH-hhcCCEEEEEE--------eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEE
Confidence 4445689999997 578889999999 89999999988 3799999999999999999999999999999999
Q ss_pred ccCCCCC
Q 015091 249 GPATNKK 255 (413)
Q Consensus 249 ~~~~~~~ 255 (413)
.++....
T Consensus 83 ~~a~~~~ 89 (98)
T d1wf2a_ 83 NLAAEPK 89 (98)
T ss_dssp EETTSCC
T ss_pred EECCCCC
Confidence 9987643
No 146
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.3e-15 Score=112.17 Aligned_cols=84 Identities=17% Similarity=0.201 Sum_probs=73.9
Q ss_pred CCCCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceE
Q 015091 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247 (413)
Q Consensus 168 ~~~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~ 247 (413)
......++|||+|||+++|+++|+++| +.++ +..+.++.+. ++..+|||||+|.+.++|++|+ ++++..|.||.|+
T Consensus 10 ~~~~~~~~v~v~nLp~~~te~dl~~~F-~~~~-~~~v~~~~~~-~g~~~G~afVeF~~~~~a~~Al-~~~~~~i~gR~I~ 85 (102)
T d1weza_ 10 FQSTTGHCVHMRGLPYRATENDIYNFF-SPLN-PMRVHIEIGP-DGRVTGEADVEFATHEDAVAAM-AKDKANMQHRYVE 85 (102)
T ss_dssp CCCSSSCEEEEESCCTTCCHHHHHHSS-CSCC-CSEEEEEESS-SSCEEEEEEEECSSSHHHHHHH-TTSSCCSSSSCCE
T ss_pred CcCCCCCEEEEeCCCCcCCHHHHHHHH-hccC-cceeeeEEec-CCcceEEEEEEECCHHHHHHHH-HcCCCEECCEEEE
Confidence 345566799999999999999999999 7887 5577787775 6889999999999999999998 5899999999999
Q ss_pred eccCCCCC
Q 015091 248 IGPATNKK 255 (413)
Q Consensus 248 v~~~~~~~ 255 (413)
|.++....
T Consensus 86 V~~s~~~~ 93 (102)
T d1weza_ 86 LFLNSTAG 93 (102)
T ss_dssp EEEECCCC
T ss_pred EEEcCCCC
Confidence 99987754
No 147
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=3.4e-15 Score=106.25 Aligned_cols=77 Identities=19% Similarity=0.415 Sum_probs=69.4
Q ss_pred CCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccC
Q 015091 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (413)
Q Consensus 172 ~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~ 251 (413)
..++|||+|||.++++++|+++| +.||.+..+.+. +++|||||+|.+.++|..|++.|++..+.|+.|+|.++
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F-~~~g~i~~~~~~------~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~a 79 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEF-NNIKPGAVERVK------KIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 79 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHH-HTTSTTCEEEEE------ECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECC
T ss_pred CCCEEEEcCCCCCCCHHHHHHhh-cccceeeeEEEc------cccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEec
Confidence 34689999999999999999999 899999877764 34789999999999999999999999999999999998
Q ss_pred CCCC
Q 015091 252 TNKK 255 (413)
Q Consensus 252 ~~~~ 255 (413)
.++.
T Consensus 80 kP~~ 83 (86)
T d2cpda1 80 KPVD 83 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 7654
No 148
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1e-15 Score=113.10 Aligned_cols=83 Identities=13% Similarity=0.187 Sum_probs=74.1
Q ss_pred CCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEec
Q 015091 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (413)
Q Consensus 170 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~ 249 (413)
.....+|||+|||+++++++|+++| +.||.+..+.++....+|.++|||||+|.+.++|++|+ .+++..|.|+.|.|.
T Consensus 5 ~~~~~~v~v~nLp~~~t~~~l~~~F-~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al-~~n~~~i~gr~i~V~ 82 (103)
T d2cpya1 5 NSAKVCAHITNIPFSITKMDVLQFL-EGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSE-RLHRKKLNGREAFVH 82 (103)
T ss_dssp CSCCCEEEEESCCTTSCHHHHHHHT-TTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHG-GGCSEEETTEEEEEE
T ss_pred CCCceEEEEeCCCCCCCHHHHhhhh-cccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHH-hcCCCeECCcEEEEE
Confidence 3445689999999999999999999 89999988777777679999999999999999999999 599999999999998
Q ss_pred cCCCC
Q 015091 250 PATNK 254 (413)
Q Consensus 250 ~~~~~ 254 (413)
.+...
T Consensus 83 ~~~~~ 87 (103)
T d2cpya1 83 VVTLE 87 (103)
T ss_dssp EECHH
T ss_pred ECCHH
Confidence 87543
No 149
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=8.1e-16 Score=113.68 Aligned_cols=76 Identities=16% Similarity=0.191 Sum_probs=66.0
Q ss_pred CCCCceEEEecCCCCCCHHHHHHHHhcCCCeEE-EEeeC-----CCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEe
Q 015091 279 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH-VKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 352 (413)
Q Consensus 279 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~-v~~~~-----~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 352 (413)
.....+|||+|||+++++++|+++|+.||.|.. +.+.. .+|+|||+|.+.++|.+|+. ||+..|+|+.|.|.+
T Consensus 5 ~~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~ 83 (103)
T d2cpya1 5 NSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHV 83 (103)
T ss_dssp CSCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEE
T ss_pred CCCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEE
Confidence 345578999999999999999999999998865 44432 37899999999999999996 899999999999998
Q ss_pred ccC
Q 015091 353 GRS 355 (413)
Q Consensus 353 ~~~ 355 (413)
+..
T Consensus 84 ~~~ 86 (103)
T d2cpya1 84 VTL 86 (103)
T ss_dssp ECH
T ss_pred CCH
Confidence 754
No 150
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.1e-15 Score=114.63 Aligned_cols=78 Identities=18% Similarity=0.162 Sum_probs=68.3
Q ss_pred CCCcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCccee
Q 015091 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFR 156 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~ 156 (413)
....++|||+|||+++|+++|+++|+.||.+..+.++.+..+|+++|||||+|.+.++|++|++ +|+..|.++.+.|.
T Consensus 15 ~~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~ 92 (112)
T d1wela1 15 HEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVH 92 (112)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEE
T ss_pred CCCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEE
Confidence 4467789999999999999999999999999887777766789999999999999999999995 89999977655544
No 151
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.1e-15 Score=109.12 Aligned_cols=78 Identities=21% Similarity=0.336 Sum_probs=69.0
Q ss_pred CCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEecc
Q 015091 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (413)
Q Consensus 171 ~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~ 250 (413)
..+++|||+|||+++++++|+++| +.||.|.++++. ..+++||||+|.+.++|++|+. +++.+.|+.|+|.+
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F-~~~G~v~~v~~~-----~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~ 74 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFF-SQYGDVMDVFIP-----KPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISN 74 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHS-TTTSCCCEEECC-----SSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHH-HHcCCceEEEEe-----eccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEe
Confidence 457799999999999999999999 899999988763 4468999999999999999985 78899999999999
Q ss_pred CCCCCc
Q 015091 251 ATNKKT 256 (413)
Q Consensus 251 ~~~~~~ 256 (413)
+..+..
T Consensus 75 a~~k~~ 80 (88)
T d1wf0a_ 75 AEPKHN 80 (88)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 976553
No 152
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=3.2e-15 Score=109.28 Aligned_cols=68 Identities=19% Similarity=0.331 Sum_probs=61.9
Q ss_pred CCCCceEEEec--CCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCcee-CCe
Q 015091 279 DPNNTTVFVGN--LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQL-GGQ 346 (413)
Q Consensus 279 ~~~~~~l~v~n--lp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~~~-~g~ 346 (413)
..++++|+|.| |+.++|+++|+++|++||.|+++.+.+++++|||+|.+.++|.+|+..|||+.+ +++
T Consensus 15 ~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~k~~aFV~f~~~e~A~~A~~~lng~~i~~~~ 85 (101)
T d2cq2a1 15 SYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEVVDDL 85 (101)
T ss_dssp SSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTTCSCEEEEESSHHHHHHHHHHTTTCEEECTT
T ss_pred CCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccCccEEEEEECCHHHHHHHHHHhCCCCCCCCC
Confidence 34567889955 999999999999999999999999999999999999999999999999999986 444
No 153
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=3.2e-15 Score=106.58 Aligned_cols=77 Identities=16% Similarity=0.166 Sum_probs=66.8
Q ss_pred CCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccC
Q 015091 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (413)
Q Consensus 172 ~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~ 251 (413)
.+++|||+|||.++++++|+++| +.|| +..+.+ ++.++||||+|.+.++|++|++.||+..+.|+.|+|+++
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF-~~~G-~~~~~~------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a 75 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLL-KDYD-LKYCYV------DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQ 75 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHT-CSSC-CCCEEE------EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCEEEEeCCCCccChHHHHHHH-HhcC-ceeeee------eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 45789999999999999999999 8999 333333 345899999999999999999999999999999999998
Q ss_pred CCCCc
Q 015091 252 TNKKT 256 (413)
Q Consensus 252 ~~~~~ 256 (413)
..+..
T Consensus 76 ~~~~~ 80 (88)
T d1wg1a_ 76 PTDAL 80 (88)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 66543
No 154
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=6.8e-15 Score=101.35 Aligned_cols=70 Identities=14% Similarity=0.227 Sum_probs=58.8
Q ss_pred eeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceeeeeccC
Q 015091 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF 162 (413)
Q Consensus 84 l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~~~~~~ 162 (413)
|||+|||.++++++|+++|++|| +..+++ ++++|||||+|.+.++|.+|++.|||..+.++. +++.++..
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~--l~V~~a~~ 70 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERE--LSVQLQPT 70 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCE--EEEEECCS
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCccCCCCE--EEEEEeCC
Confidence 79999999999999999999999 555554 345699999999999999999999999997654 55555543
No 155
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.56 E-value=5.1e-15 Score=108.02 Aligned_cols=76 Identities=13% Similarity=0.142 Sum_probs=63.6
Q ss_pred CCCcceeeecCCCCC-CCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHH--hCCCcCCCCCcc
Q 015091 78 PGEIRTLWIGDLQYW-MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT--FNGTPMPNGEQN 154 (413)
Q Consensus 78 ~~~~~~l~v~~lp~~-~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~--l~g~~~~~~~~~ 154 (413)
...+++|||+|||.+ +|+++|+++|+.||.|.+|++++++ ++|||+|.+.++|.+|++. +++..+.|+.
T Consensus 15 ~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~k------~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~-- 86 (99)
T d1x4fa1 15 QELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMK------SQAFIEMETREDAMAMVDHCLKKALWFQGRC-- 86 (99)
T ss_dssp SCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETTT------TEEEEECSSHHHHHHHHHHHHHSCCCSSSSC--
T ss_pred CCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeecC------CcEEEEecchHHHHHHHHHHhcCCceECCEE--
Confidence 456789999999975 8999999999999999999998765 8999999999999999984 5666775544
Q ss_pred eeeeecc
Q 015091 155 FRLNWAS 161 (413)
Q Consensus 155 ~~~~~~~ 161 (413)
+++.++.
T Consensus 87 l~V~~s~ 93 (99)
T d1x4fa1 87 VKVDLSE 93 (99)
T ss_dssp CEEEEEC
T ss_pred EEEEEcC
Confidence 5555554
No 156
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=3.9e-15 Score=111.47 Aligned_cols=74 Identities=24% Similarity=0.382 Sum_probs=66.1
Q ss_pred CCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCH-HHHHHHHHHhcCceeCCeeEEEEecc
Q 015091 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADR-SCAEEALRMLNGTQLGGQNIRLSWGR 354 (413)
Q Consensus 281 ~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~-~~a~~a~~~l~~~~~~g~~l~v~~~~ 354 (413)
....+||+||+..+|+++|+++|++||.|.+|+|.+++++|||+|.+. ++|..|+..|++..+.++.+.|.|+.
T Consensus 10 g~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~ 84 (113)
T d1owxa_ 10 GCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEV 84 (113)
T ss_dssp CCEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEE
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHhcCChheEEEecCCceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEee
Confidence 345669999999999999999999999999999999999999999985 78999999999999887777776654
No 157
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=4.3e-15 Score=111.23 Aligned_cols=83 Identities=17% Similarity=0.332 Sum_probs=74.7
Q ss_pred CCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEec
Q 015091 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (413)
Q Consensus 170 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~ 249 (413)
....++|||+|||+++++++|+++| +.+|.+..+.++.+..+|.++|+|||+|.+.++|.+|+ .+|+..|+|+.|.|.
T Consensus 15 ~~~~~~i~v~nLp~~~t~~di~~~F-~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al-~~~~~~i~gR~i~V~ 92 (112)
T d1wela1 15 HEAGFCVYLKGLPFEAENKHVIDFF-KKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAAL-CRHKQYMGNRFIQVH 92 (112)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHS-CSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHH-TSCSBCSTTSCBEEE
T ss_pred CCCCeEEEEecCCCcCcHHHHhhHH-hhccccccceeeecCcccceeeEEEEEECCHHHHHHHH-HcCCCcCCCEEEEEE
Confidence 4456799999999999999999999 89999988777777779999999999999999999999 599999999999998
Q ss_pred cCCCC
Q 015091 250 PATNK 254 (413)
Q Consensus 250 ~~~~~ 254 (413)
.+...
T Consensus 93 ~~~~~ 97 (112)
T d1wela1 93 PITKK 97 (112)
T ss_dssp EECHH
T ss_pred EcChH
Confidence 77554
No 158
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=3.4e-15 Score=107.42 Aligned_cols=80 Identities=28% Similarity=0.459 Sum_probs=70.4
Q ss_pred CCceEEecCCCCCCCHHHHHH----HHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceE
Q 015091 172 PDHTIFVGDLAADVTDYMLQE----TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247 (413)
Q Consensus 172 ~~~~l~v~~lp~~~~~~~l~~----~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~ 247 (413)
++++|||+|||.++++++|++ +| +.||.|.++.+. .+++++|||||+|.+.++|.+|++.+++..+.|+.|+
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f-~~~G~i~~i~~~---~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~ 77 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIF-SRFGQILDILVS---RSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMR 77 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHH-GGGSCEEEEECC---HHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHh-cccccccceEEe---eeccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEE
Confidence 568999999999999998865 56 789999887764 3566799999999999999999999999999999999
Q ss_pred eccCCCCC
Q 015091 248 IGPATNKK 255 (413)
Q Consensus 248 v~~~~~~~ 255 (413)
|.++..+.
T Consensus 78 v~~ak~~~ 85 (91)
T d1nu4a_ 78 IQYAKTDS 85 (91)
T ss_dssp EEECSSCC
T ss_pred EEEeCCCc
Confidence 99997654
No 159
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=5.3e-15 Score=105.53 Aligned_cols=80 Identities=16% Similarity=0.123 Sum_probs=65.8
Q ss_pred CCCCcceeeecCCCCC-CCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcce
Q 015091 77 QPGEIRTLWIGDLQYW-MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNF 155 (413)
Q Consensus 77 ~~~~~~~l~v~~lp~~-~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~ 155 (413)
....+++|||+|||.. +|++||.++|+.||.|.+|.+..++ ++|||+|.+.++|.+|++.+++..+...+..+
T Consensus 4 ~~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~k------~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l 77 (89)
T d1x4da1 4 RVETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNKI------NEAFIEMATTEDAQAAVDYYTTTPALVFGKPV 77 (89)
T ss_dssp CCCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSSS------SCEEEEESSHHHHHHHHHHHHHSCCEETTEEC
T ss_pred CCCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeeccc------eEEEEEEcchhhHHHHHHHHhhCCCccCCceE
Confidence 4567899999999986 7899999999999999999998765 69999999999999999977544333345666
Q ss_pred eeeeccC
Q 015091 156 RLNWASF 162 (413)
Q Consensus 156 ~~~~~~~ 162 (413)
++.|+..
T Consensus 78 ~V~~s~~ 84 (89)
T d1x4da1 78 RVHLSQK 84 (89)
T ss_dssp EEEEECC
T ss_pred EEEECCC
Confidence 6666653
No 160
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=1.5e-16 Score=114.58 Aligned_cols=71 Identities=20% Similarity=0.387 Sum_probs=62.4
Q ss_pred ceEEEecCCCCCCHHHHHHHHhcCCCeEEEEe-----------eCCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEE
Q 015091 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-----------PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 351 (413)
Q Consensus 283 ~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~-----------~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~ 351 (413)
++|||+|||.++++++|+++|+.||.|..+.+ .+++++|||+|.+.++|.+|+. |||..|.|+.|+|+
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 67999999999999999999999987654443 3568999999999999999985 99999999999997
Q ss_pred ecc
Q 015091 352 WGR 354 (413)
Q Consensus 352 ~~~ 354 (413)
.++
T Consensus 81 r~k 83 (90)
T d1u2fa_ 81 RPH 83 (90)
T ss_dssp CTT
T ss_pred CCC
Confidence 544
No 161
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.49 E-value=2.8e-14 Score=99.18 Aligned_cols=72 Identities=19% Similarity=0.206 Sum_probs=63.4
Q ss_pred CceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCceeCCee-EEEEeccC
Q 015091 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQN-IRLSWGRS 355 (413)
Q Consensus 282 ~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~-l~v~~~~~ 355 (413)
.+.|+|.|+|.+.+++.| ++|++||.|.++.+.+++++|||+|.+.++|.+||+ +||..|+|+. |.|..+..
T Consensus 4 ~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~~~ 76 (81)
T d1wwha1 4 DTWVTVFGFPQASASYIL-LQFAQYGNILKHVMSNTGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPCID 76 (81)
T ss_dssp GGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEECSSSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEECCC
T ss_pred ccEEEEECCChHHHHHHH-HHHHhhhhhheEEecCCCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeCCC
Confidence 366999999999886555 589999999999999999999999999999999996 8999999984 66877654
No 162
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.7e-15 Score=108.87 Aligned_cols=78 Identities=18% Similarity=0.403 Sum_probs=68.3
Q ss_pred ceEEecCCCCCCCHHHHHHHHhhhCCCcceeEE-----EEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEe
Q 015091 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKV-----VIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248 (413)
Q Consensus 174 ~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~-----~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v 248 (413)
++|||+|||.++++++|+++| +.||.+..+.+ +.+..+++++|||||+|.+.++|++|+ +|++..+.|+.|+|
T Consensus 2 RrlyVgNLp~~~te~~l~~~F-~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~-~l~g~~~~Gr~l~V 79 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFF-NAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAM-AFDGIIFQGQSLKI 79 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHH-HHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGG-GGSSCCSSSSCCCC
T ss_pred CEEEEcCCCCccchHHHHHHH-HhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHH-hhCCcEECCEEEEE
Confidence 589999999999999999999 88998877654 345557788999999999999999998 69999999999999
Q ss_pred ccCCC
Q 015091 249 GPATN 253 (413)
Q Consensus 249 ~~~~~ 253 (413)
+++..
T Consensus 80 ~r~k~ 84 (90)
T d1u2fa_ 80 RRPHD 84 (90)
T ss_dssp BCTTC
T ss_pred CCCCC
Confidence 86544
No 163
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=6.9e-14 Score=101.71 Aligned_cols=79 Identities=22% Similarity=0.286 Sum_probs=68.1
Q ss_pred CCCCceEEEecC--CCCC---------CHHHHHHHHhcCCCeEEEEeeCC--CcEEEEEecCHHHHHHHHHHhcCceeCC
Q 015091 279 DPNNTTVFVGNL--DSIV---------TDEHLRELFSQYGQLVHVKIPAG--KRCGFVQFADRSCAEEALRMLNGTQLGG 345 (413)
Q Consensus 279 ~~~~~~l~v~nl--p~~~---------~~~~l~~~f~~~G~i~~v~~~~~--~~~afV~f~~~~~a~~a~~~l~~~~~~g 345 (413)
...+++|+|.|| +.++ .++||++.|++||.|..|.+.++ +|+|||+|++.++|.+|+..|||+.|+|
T Consensus 5 ~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~~~g 84 (99)
T d2dita1 5 MRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGG 84 (99)
T ss_dssp CCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEETT
T ss_pred CCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcEECC
Confidence 345789999999 4432 23689999999999999998765 7899999999999999999999999999
Q ss_pred eeEEEEeccCCC
Q 015091 346 QNIRLSWGRSPS 357 (413)
Q Consensus 346 ~~l~v~~~~~~~ 357 (413)
|.|+|+|..++.
T Consensus 85 r~i~v~~~~g~~ 96 (99)
T d2dita1 85 RQITAQAWDGTT 96 (99)
T ss_dssp EECEEEECCSCC
T ss_pred EEEEEEEeCCcC
Confidence 999999987654
No 164
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=3.9e-14 Score=103.37 Aligned_cols=72 Identities=21% Similarity=0.267 Sum_probs=61.1
Q ss_pred CCCcceeeecC--CCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCC-CCCcc
Q 015091 78 PGEIRTLWIGD--LQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMP-NGEQN 154 (413)
Q Consensus 78 ~~~~~~l~v~~--lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~-~~~~~ 154 (413)
..++++|+|.| |+.++|+++|+++|++||.|.+|++..++ +||||+|.+.++|.+|++.|||+.+. +..+.
T Consensus 15 ~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~k------~~aFV~f~~~e~A~~A~~~lng~~i~~~~~~~ 88 (101)
T d2cq2a1 15 SYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNK------PYSFARYRTTEESKRAYVTLNGKEVVDDLGQK 88 (101)
T ss_dssp SSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTTC------SCEEEEESSHHHHHHHHHHTTTCEEECTTSCE
T ss_pred CCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccCc------cEEEEEECCHHHHHHHHHHhCCCCCCCCCCcE
Confidence 34567888855 99999999999999999999999987665 79999999999999999999998773 33333
Q ss_pred e
Q 015091 155 F 155 (413)
Q Consensus 155 ~ 155 (413)
+
T Consensus 89 i 89 (101)
T d2cq2a1 89 I 89 (101)
T ss_dssp E
T ss_pred E
Confidence 3
No 165
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=3.9e-15 Score=109.35 Aligned_cols=71 Identities=21% Similarity=0.254 Sum_probs=65.2
Q ss_pred ceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC-----CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEec
Q 015091 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG-----KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353 (413)
Q Consensus 283 ~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~-----~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 353 (413)
..++|.++..++++++|+++|++||.|.+|.|.++ +|+|||+|.+.++|.+|+..|||+.|+||.|+|+|.
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 45778888888999999999999999999999654 799999999999999999999999999999999984
No 166
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=9.3e-15 Score=107.30 Aligned_cols=75 Identities=16% Similarity=0.146 Sum_probs=67.8
Q ss_pred ceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceee
Q 015091 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (413)
Q Consensus 82 ~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~ 157 (413)
..++|.++..++++++|+++|++||.|.+|+|+++. +++++|||||+|.+.++|.+|++.|||+.+.++.+.+.+
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~-~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~ 102 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNL-GDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAEL 102 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSS-SSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEE
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCC-CCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEE
Confidence 458899999999999999999999999999998774 799999999999999999999999999999776655543
No 167
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.44 E-value=1.2e-13 Score=101.17 Aligned_cols=80 Identities=10% Similarity=0.017 Sum_probs=69.4
Q ss_pred CCCceEEecCCCCCCC-----HHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcc
Q 015091 171 TPDHTIFVGDLAADVT-----DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245 (413)
Q Consensus 171 ~~~~~l~v~~lp~~~~-----~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~ 245 (413)
..+++|||+||+.++. +++|+++| +.||.|.++.+++ ++++|||+|.+.++|.+|++.||+..|.|+.
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF-~~~G~i~~~~~~k------~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~ 75 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLF-RTYDKDTTFQYFK------SFKRVRINFSNPLSAADARLRLHKTEFLGKE 75 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHH-HTTCSSCEEEEET------TTTEEEEECSSTTHHHHHHHTSTTSEETTEE
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHh-cccccceEEEEec------CCCEEEEEECCHHHHHHHHHHhcccccCCCE
Confidence 3567899999998763 35688999 8999999998873 4789999999999999999999999999999
Q ss_pred eEeccCCCCCcc
Q 015091 246 MRIGPATNKKTV 257 (413)
Q Consensus 246 i~v~~~~~~~~~ 257 (413)
|+|.++......
T Consensus 76 l~v~~a~~~~~~ 87 (104)
T d1weya_ 76 MKLYFAQTLHIG 87 (104)
T ss_dssp CEEECCCCSSCC
T ss_pred eEEeecccCCCC
Confidence 999999766543
No 168
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=1.7e-13 Score=102.37 Aligned_cols=73 Identities=18% Similarity=0.181 Sum_probs=64.2
Q ss_pred cceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCH-HHHHHHHHHhCCCcCCCCCcceeeee
Q 015091 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISR-AGAERVLQTFNGTPMPNGEQNFRLNW 159 (413)
Q Consensus 81 ~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~-~~A~~a~~~l~g~~~~~~~~~~~~~~ 159 (413)
...+||+||+.++|+++|+++|+.||.|.+|.|++++ +||||.|.+. ++|.+|+..+++..+.++.+.+.+.+
T Consensus 11 ~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~k------g~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~ 84 (113)
T d1owxa_ 11 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGA------KEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEV 84 (113)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTC------SEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEE
T ss_pred CeEEEECCCCCCCCHHHHHHHHHhcCChheEEEecCC------ceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEee
Confidence 3456999999999999999999999999999998664 8999999996 78999999999999988777776654
No 169
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=5.5e-13 Score=97.94 Aligned_cols=76 Identities=18% Similarity=0.280 Sum_probs=65.5
Q ss_pred CCCceEEEecC--CCCC--------CHHHHHHHHhcCCCeEEEEeeCC--------CcEEEEEecCHHHHHHHHHHhcCc
Q 015091 280 PNNTTVFVGNL--DSIV--------TDEHLRELFSQYGQLVHVKIPAG--------KRCGFVQFADRSCAEEALRMLNGT 341 (413)
Q Consensus 280 ~~~~~l~v~nl--p~~~--------~~~~l~~~f~~~G~i~~v~~~~~--------~~~afV~f~~~~~a~~a~~~l~~~ 341 (413)
.++++|.|.|+ +..+ ..+||++.|++||.|++|.|.++ .|++||+|.+.++|.+|+..|||+
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 35788999999 4443 23679999999999999999653 479999999999999999999999
Q ss_pred eeCCeeEEEEeccC
Q 015091 342 QLGGQNIRLSWGRS 355 (413)
Q Consensus 342 ~~~g~~l~v~~~~~ 355 (413)
.++||.|.|.|...
T Consensus 82 ~f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 82 KFANRVVVTKYCDP 95 (104)
T ss_dssp CSSSSCCEEEEECH
T ss_pred EECCeEEEEEEcCH
Confidence 99999999999753
No 170
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.27 E-value=2.7e-12 Score=88.95 Aligned_cols=64 Identities=14% Similarity=0.138 Sum_probs=54.7
Q ss_pred CcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCCcCCCC
Q 015091 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNG 151 (413)
Q Consensus 80 ~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~~~~~~ 151 (413)
+.+.|+|.++|++.+++.| ++|+.||.|.++++.++ ++||||+|.++++|++|++ +||..+.++
T Consensus 3 ~~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~~~------~~~~fV~f~~~~~A~~Al~-~nG~~~~g~ 66 (81)
T d1wwha1 3 DDTWVTVFGFPQASASYIL-LQFAQYGNILKHVMSNT------GNWMHIRYQSKLQARKALS-KDGRIFGES 66 (81)
T ss_dssp GGGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEECSS------SSEEEEEESSHHHHHHHHT-TTTCEETTT
T ss_pred cccEEEEECCChHHHHHHH-HHHHhhhhhheEEecCC------CCEEEEEEcccHHHHHHHh-cCCCeECCc
Confidence 4578999999999986655 58999999999987543 4899999999999999995 899988664
No 171
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=1.9e-11 Score=88.52 Aligned_cols=81 Identities=11% Similarity=0.192 Sum_probs=68.0
Q ss_pred CCCCceEEecCC--CCCC---------CHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCC
Q 015091 170 DTPDHTIFVGDL--AADV---------TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238 (413)
Q Consensus 170 ~~~~~~l~v~~l--p~~~---------~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~ 238 (413)
...+++|+|.|| +.++ .+++|++.| +.||.|..+.+..+ ..+|++||+|.+.++|.+|+..||+
T Consensus 5 ~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~-~~~G~V~~v~~~~~----~~~G~~fV~f~~~e~A~~A~~~lng 79 (99)
T d2dita1 5 MRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVEC-SKFGQIRKLLLFDR----HPDGVASVSFRDPEEADYCIQTLDG 79 (99)
T ss_dssp CCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHG-GGTSCCSEEEEETT----CTTCEEEEECSCHHHHHHHHHHSTT
T ss_pred CCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHh-cCcccEEEEeccCC----CCccEEEEEECCHHHHHHHHHHhCC
Confidence 456789999998 4432 236788899 89999999887543 4679999999999999999999999
Q ss_pred ccccCcceEeccCCCCC
Q 015091 239 VFCSTRPMRIGPATNKK 255 (413)
Q Consensus 239 ~~~~g~~i~v~~~~~~~ 255 (413)
..++|+.|.|.++..+.
T Consensus 80 ~~~~gr~i~v~~~~g~~ 96 (99)
T d2dita1 80 RWFGGRQITAQAWDGTT 96 (99)
T ss_dssp CEETTEECEEEECCSCC
T ss_pred cEECCEEEEEEEeCCcC
Confidence 99999999999987654
No 172
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=1.2e-11 Score=90.59 Aligned_cols=78 Identities=15% Similarity=0.128 Sum_probs=63.8
Q ss_pred CcceeeecCC--CCCC--------CHHHHHHHhhccCceEEEEEEecCCC--CCcccEEEEEEcCHHHHHHHHHHhCCCc
Q 015091 80 EIRTLWIGDL--QYWM--------DETYLNTCFAHTGEVVAVKVIRNKQT--GQIEGYGFIEFISRAGAERVLQTFNGTP 147 (413)
Q Consensus 80 ~~~~l~v~~l--p~~~--------~~~~l~~~f~~~G~v~~~~~~~~~~~--g~~~g~afV~f~~~~~A~~a~~~l~g~~ 147 (413)
+++.|.|.|+ +.++ ..++|++.|++||.|.+|+|.++..+ ....|++||+|.+.++|.+|++.|||+.
T Consensus 3 Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~ 82 (104)
T d1o0pa_ 3 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 82 (104)
T ss_dssp CCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCE
Confidence 5788999999 4443 24578999999999999999886543 3456899999999999999999999999
Q ss_pred CCCCCcceee
Q 015091 148 MPNGEQNFRL 157 (413)
Q Consensus 148 ~~~~~~~~~~ 157 (413)
+.++.+.+..
T Consensus 83 f~gR~v~v~f 92 (104)
T d1o0pa_ 83 FANRVVVTKY 92 (104)
T ss_dssp SSSSCCEEEE
T ss_pred ECCeEEEEEE
Confidence 9876655554
No 173
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.99 E-value=7.1e-06 Score=55.04 Aligned_cols=54 Identities=30% Similarity=0.507 Sum_probs=49.2
Q ss_pred HHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEec
Q 015091 297 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 353 (413)
Q Consensus 297 ~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 353 (413)
.+|.+.|+.||+|.-|++..+ ..+|+|.+-+.|.+|+. ++|.++.|+.|+|...
T Consensus 39 ~~Llq~l~~~GeViLvRFv~d--~mwVTF~dG~SAL~al~-l~g~~v~G~~l~It~~ 92 (95)
T d1ufwa_ 39 TELMQTLGSYGTIVLVRINQG--QMLVTFADSHSALSVLD-VDGMKVKGRAVKISGP 92 (95)
T ss_dssp HHHHHHHHHHSCCSEEEEETT--EEEEECSCSHHHHHHHH-GGGSEETTEEEEEECC
T ss_pred HHHHHHHhhCCeEEEEEEeCC--eEEEEECCcHHHHHHhc-cCCeEEcceEEEEecC
Confidence 467888999999999999876 89999999999999999 7999999999999863
No 174
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.84 E-value=5.5e-05 Score=47.99 Aligned_cols=58 Identities=22% Similarity=0.317 Sum_probs=50.6
Q ss_pred HHHHHHHhcCCCeEEEEeeCC---CcEEEEEecCHHHHHHHHHHhcCceeCCeeEEEEecc
Q 015091 297 EHLRELFSQYGQLVHVKIPAG---KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 354 (413)
Q Consensus 297 ~~l~~~f~~~G~i~~v~~~~~---~~~afV~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~ 354 (413)
+-|.+.|++++.|.++.+... .-.|-|...+..+|..|+..||-++|++++|.|+++.
T Consensus 11 q~L~~~f~~h~~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 11 QLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHHhheeEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 345567999999999999532 4479999999999999999999999999999999975
No 175
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.74 E-value=4.8e-05 Score=52.06 Aligned_cols=69 Identities=13% Similarity=0.110 Sum_probs=59.3
Q ss_pred ceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcc--cEEEEEEcCHHHHHHHHHHhCCCcCCC
Q 015091 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE--GYGFIEFISRAGAERVLQTFNGTPMPN 150 (413)
Q Consensus 82 ~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~--g~afV~f~~~~~A~~a~~~l~g~~~~~ 150 (413)
+.|.|+.||+.+|++++.+.++..|.+........+.+-+.. .-|||.|.+.++.....+.++|..+.+
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D 72 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLD 72 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEEC
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEc
Confidence 478999999999999999999999999988888876554432 459999999999999999999988744
No 176
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.51 E-value=0.00033 Score=47.76 Aligned_cols=72 Identities=11% Similarity=0.122 Sum_probs=59.2
Q ss_pred ceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCC--------CcEEEEEecCHHHHHHHHHHhcCceeCC-----eeEE
Q 015091 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG--------KRCGFVQFADRSCAEEALRMLNGTQLGG-----QNIR 349 (413)
Q Consensus 283 ~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~--------~~~afV~f~~~~~a~~a~~~l~~~~~~g-----~~l~ 349 (413)
++|.|+.||.++|++++.+.+...|.+.......+ -..|||.|.+.++.......++|+.+-+ ....
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~ 81 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAI 81 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeE
Confidence 57999999999999999999999999888777543 2479999999999999999999998632 1446
Q ss_pred EEecc
Q 015091 350 LSWGR 354 (413)
Q Consensus 350 v~~~~ 354 (413)
|++|-
T Consensus 82 VE~AP 86 (91)
T d1uw4a_ 82 VEFAP 86 (91)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 66653
No 177
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.79 E-value=0.002 Score=42.95 Aligned_cols=71 Identities=18% Similarity=0.277 Sum_probs=54.1
Q ss_pred CCCceEEecCCCCCCC---------HHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccc
Q 015091 171 TPDHTIFVGDLAADVT---------DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241 (413)
Q Consensus 171 ~~~~~l~v~~lp~~~~---------~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~ 241 (413)
.+.-+|.|.-...+.. ..+|.+.| +.||+|.-++++.+ ..+|.|.+-++|.+|+ .+++.++
T Consensus 13 PpDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l-~~~GeViLvRFv~d--------~mwVTF~dG~SAL~al-~l~g~~v 82 (95)
T d1ufwa_ 13 PLDATVVVNLQSPTLEEKNEFPEDLRTELMQTL-GSYGTIVLVRINQG--------QMLVTFADSHSALSVL-DVDGMKV 82 (95)
T ss_dssp CTTCEEEEEESSCCHHHHHSCCHHHHHHHHHHH-HHHSCCSEEEEETT--------EEEEECSCSHHHHHHH-HGGGSEE
T ss_pred CCCcEEEEEeccCCccccccCCHHHHHHHHHHH-hhCCeEEEEEEeCC--------eEEEEECCcHHHHHHh-ccCCeEE
Confidence 4445666644433322 24677888 88999988888744 5799999999999999 7999999
Q ss_pred cCcceEeccC
Q 015091 242 STRPMRIGPA 251 (413)
Q Consensus 242 ~g~~i~v~~~ 251 (413)
.|+.|.|...
T Consensus 83 ~G~~l~It~~ 92 (95)
T d1ufwa_ 83 KGRAVKISGP 92 (95)
T ss_dssp TTEEEEEECC
T ss_pred cceEEEEecC
Confidence 9999998754
No 178
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.20 E-value=0.012 Score=39.88 Aligned_cols=62 Identities=19% Similarity=0.270 Sum_probs=49.5
Q ss_pred CCCCCCCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhc
Q 015091 276 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 339 (413)
Q Consensus 276 ~~~~~~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~ 339 (413)
.+..+...-||.-.+|..+...||.++|+.||.|.---| +...|||...+.++|..++..++
T Consensus 9 ~d~~p~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswI--ddTSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 9 PDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWI--DDTSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp SCCCCCCCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEE--ETTEEEEECSCHHHHHHHHHHHH
T ss_pred CCCCCCcceeEEEeCCcccchhHHHHHhcCCCceEEEEe--cCceEEEEecCHHHHHHHHHHhc
Confidence 344455567899999999999999999999998753333 34599999999999998887654
No 179
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.05 E-value=0.0046 Score=39.00 Aligned_cols=63 Identities=17% Similarity=0.218 Sum_probs=50.2
Q ss_pred HHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhCCccccCcceEeccCCC
Q 015091 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253 (413)
Q Consensus 187 ~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~~~~~~g~~i~v~~~~~ 253 (413)
.+.|.+.| +.++.|.++.+..-. .+ .-.|-|...+..+|..|+..|+..+++.+.|.|.++..
T Consensus 10 qq~L~~~f-~~h~~V~sv~l~~~~-dg--~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~~ 72 (73)
T d2dgxa1 10 QQLLQEAF-ARHGKVKSVELSPHT-DY--QLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLATG 72 (73)
T ss_dssp HHHHHHHH-HHHSCEEEEEECSCC-ST--TCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred HHHHHHHH-HhheeEEEEEEEecc-CC--cEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEecC
Confidence 34566677 788888877764332 23 44689999999999999999999999999999998754
No 180
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.85 E-value=0.48 Score=31.80 Aligned_cols=58 Identities=10% Similarity=0.136 Sum_probs=46.1
Q ss_pred CCCCceEEecCCCCCCCHHHHHHHHhhhCCCcceeEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhh
Q 015091 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236 (413)
Q Consensus 170 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l 236 (413)
......||.-..|..+...+|.++| +.||.|. |..+-+ ..|||...+.+.|+.++..+
T Consensus 12 ~p~RdHVf~~tFP~~Wk~~dI~~lF-SpfG~V~-VswIdd-------TSa~V~L~~~e~~~~v~~~~ 69 (100)
T d1whva_ 12 QPKRDHVLHVTFPKEWKTSDLYQLF-SAFGNIQ-ISWIDD-------TSAFVSLSQPEQVQIAVNTS 69 (100)
T ss_dssp CCCCCSEEEEECCTTCCHHHHHHHH-TTTCSCC-CEEEET-------TEEEEECSCHHHHHHHHHHH
T ss_pred CCCcceeEEEeCCcccchhHHHHHh-cCCCceE-EEEecC-------ceEEEEecCHHHHHHHHHHh
Confidence 3444578999999999999999999 8999876 334433 26999999999998888543
No 181
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=64.19 E-value=12 Score=22.99 Aligned_cols=45 Identities=13% Similarity=0.038 Sum_probs=30.3
Q ss_pred HHHHHHHhcCC-CeEEEEeeCCCcEEEEE--ecCHHHHHHHHHHhcCce
Q 015091 297 EHLRELFSQYG-QLVHVKIPAGKRCGFVQ--FADRSCAEEALRMLNGTQ 342 (413)
Q Consensus 297 ~~l~~~f~~~G-~i~~v~~~~~~~~afV~--f~~~~~a~~a~~~l~~~~ 342 (413)
.++.+.|++.| .|..+.....++++.+. .++.+.|.++++. +|..
T Consensus 14 ~~v~~~L~~~~InI~~~y~~~~~~~~~~vl~vdd~~~a~~~L~~-~G~~ 61 (71)
T d2f06a1 14 AKVLGFLSAEGVFIEYMYSFANNNVANVVIRPSNMDKCIEVLKE-KKVD 61 (71)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH-TTCE
T ss_pred HHHHHHHHHCCCCEEEEEEEcCCCcEEEEEEECCHHHHHHHHHH-CCCE
Confidence 35778888877 57776665555566544 4688888888886 5544
No 182
>d2f06a2 d.58.18.11 (A:1-70) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=63.02 E-value=12 Score=23.10 Aligned_cols=52 Identities=19% Similarity=0.287 Sum_probs=35.8
Q ss_pred eEEEecCCCCCCHHHHHHHHhcCC-CeEEEEeeCCCcEEEEEe--cCHHHHHHHHHH
Q 015091 284 TVFVGNLDSIVTDEHLRELFSQYG-QLVHVKIPAGKRCGFVQF--ADRSCAEEALRM 337 (413)
Q Consensus 284 ~l~v~nlp~~~~~~~l~~~f~~~G-~i~~v~~~~~~~~afV~f--~~~~~a~~a~~~ 337 (413)
.||+.|-|-.+ .++..+|++.| .|..+.+.....++++++ ++.+.|.+.+++
T Consensus 7 sV~~eNkpG~L--~~v~~~~~~~~inI~sl~v~~t~~~~i~Riiv~~~e~a~~~L~~ 61 (70)
T d2f06a2 7 SIFLENKSGRL--TEVTEVLAKENINLSALCIAENADFGILRGIVSDPDKAYKALKD 61 (70)
T ss_dssp EEEECSSSSHH--HHHHHHHHHTTCCEEEEEEEECSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCcHH--HHHHHHHHHCCCCEEEEEEeecCCCCEEEEEECChHHHHHHHHH
Confidence 46666655544 36888999887 678887766555666555 677777777765
No 183
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=62.00 E-value=6.8 Score=27.20 Aligned_cols=40 Identities=18% Similarity=0.344 Sum_probs=30.8
Q ss_pred HHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhc
Q 015091 297 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 339 (413)
Q Consensus 297 ~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~ 339 (413)
.++++.+..+|.+ .+.-+-.++|..|++.++|.+|++.+.
T Consensus 60 ~~~~~~L~~~g~~---~MSGSGstvF~~f~~~~~a~~~~~~l~ 99 (120)
T d1oj4a2 60 DAVLSWLLEYAPS---RLTGTGACVFAEFDTESEARQVLEQAP 99 (120)
T ss_dssp HHHHHHHTTTSCE---EECTTSSCEEEEESSHHHHHHHHHHSC
T ss_pred HHHHHHHhhcccc---eecCCCCEEEEEeCCHHHHHHHHHHcC
Confidence 5677778888863 343334578999999999999999874
No 184
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=60.53 E-value=15 Score=22.48 Aligned_cols=54 Identities=7% Similarity=0.082 Sum_probs=41.1
Q ss_pred eEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecC---HHHHHHHHHH
Q 015091 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD---RSCAEEALRM 337 (413)
Q Consensus 284 ~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~---~~~a~~a~~~ 337 (413)
+|.|.|+.=..-...|+..+...-.|.++.+.-..+.+.|+|.+ .++..+++..
T Consensus 5 ~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~ 61 (72)
T d2ggpb1 5 ILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIED 61 (72)
T ss_dssp EEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHH
T ss_pred EEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHH
Confidence 45666776555667899999999899999998888999999974 3445555554
No 185
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.85 E-value=16 Score=22.86 Aligned_cols=58 Identities=12% Similarity=0.195 Sum_probs=46.7
Q ss_pred CCceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEec----CHHHHHHHHHHh
Q 015091 281 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA----DRSCAEEALRML 338 (413)
Q Consensus 281 ~~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~----~~~~a~~a~~~l 338 (413)
..-+|.|.|+.=..-...|...|+..-.|.++.+.-..+.+-|+|. +.++..++|+.+
T Consensus 8 ~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~ 69 (79)
T d1kvja_ 8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDM 69 (79)
T ss_dssp EEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHH
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhc
Confidence 3457889998777777889999999988999999888899999995 446666666654
No 186
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=52.59 E-value=15 Score=25.21 Aligned_cols=44 Identities=16% Similarity=0.067 Sum_probs=33.6
Q ss_pred HHHHHHHhcCCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCc
Q 015091 297 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 341 (413)
Q Consensus 297 ~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l~~~ 341 (413)
+++++.+..+|... +.+.=+-.++|..|.+.++|.++.+.|...
T Consensus 66 ~~~~~~l~~~g~~~-~~mSGSGst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMRALGLRG-VLMSGSGSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHTTCEE-EEECTTSSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhh-eeecCCCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 66777788888643 445444457899999999999999998654
No 187
>d1ywxa1 d.12.1.3 (A:1-102) Ribosomal protein S24e {Methanococcus maripaludis [TaxId: 39152]}
Probab=44.98 E-value=17 Score=24.26 Aligned_cols=49 Identities=18% Similarity=0.208 Sum_probs=27.9
Q ss_pred CCCCHHHHHHHHhhhCCCcceeEEEEcC--CCCCCceeEEEE-eCCHHHHHH
Q 015091 183 ADVTDYMLQETFRARYPSTKGAKVVIDR--LTGRTKGYGFVR-FGDESEQLR 231 (413)
Q Consensus 183 ~~~~~~~l~~~f~~~~g~v~~~~~~~~~--~~g~~~g~afv~-f~~~~~a~~ 231 (413)
.+.+..+|++.+.+.++.-.++.++..- .-|..+..||+. |+|.+.|.+
T Consensus 28 ~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~IYd~~e~~kk 79 (102)
T d1ywxa1 28 ATPSIKDVKMKLVAVLNANKQVLVVDTLDQIFGKLEAEGYAKIYNDEKAMAT 79 (102)
T ss_dssp CCCCHHHHHHHHHHHHTSCSTTEEEEEEEECSSSSEEEEEEEECSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCcCcCEEEEEcCEecCCCCeEEEEEEEECCHHHHHh
Confidence 4567788888887777754444444322 234444444444 566665544
No 188
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=44.91 E-value=28 Score=20.88 Aligned_cols=56 Identities=11% Similarity=0.023 Sum_probs=44.1
Q ss_pred ceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEec----CHHHHHHHHHHh
Q 015091 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA----DRSCAEEALRML 338 (413)
Q Consensus 283 ~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~----~~~~a~~a~~~l 338 (413)
.++.|.|+.=..-...|+..++..-.|.++.+....+.+.|+|+ +.++-.+++..+
T Consensus 4 ~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~ 63 (69)
T d2qifa1 4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQ 63 (69)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHT
T ss_pred EEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 45788887666667889999999989999999999999999995 345555666653
No 189
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.93 E-value=31 Score=20.84 Aligned_cols=56 Identities=9% Similarity=0.194 Sum_probs=43.4
Q ss_pred ceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEec----CHHHHHHHHHHh
Q 015091 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA----DRSCAEEALRML 338 (413)
Q Consensus 283 ~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~----~~~~a~~a~~~l 338 (413)
.+|.|.|+.=..-...|++.+...-.|.++.+....+.+.|+|. +.++-.+++..+
T Consensus 5 ~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~ 64 (72)
T d2aw0a_ 5 TVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDM 64 (72)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHH
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhh
Confidence 45678887666667789999998888999999888899999995 345556666654
No 190
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=42.40 E-value=16 Score=25.07 Aligned_cols=41 Identities=17% Similarity=0.228 Sum_probs=28.4
Q ss_pred HHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCC
Q 015091 96 TYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145 (413)
Q Consensus 96 ~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g 145 (413)
.++.+.+..+|.+ + +. |- -..+|..|.+.++|.+|.+.+..
T Consensus 60 ~~~~~~L~~~g~~---~-MS----GS-GstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 60 DAVLSWLLEYAPS---R-LT----GT-GACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHHTTTSCE---E-EC----TT-SSCEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHHhhcccc---e-ec----CC-CCEEEEEeCCHHHHHHHHHHcCc
Confidence 3455566777752 2 22 22 24789999999999999998753
No 191
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}
Probab=33.68 E-value=46 Score=20.05 Aligned_cols=54 Identities=17% Similarity=0.144 Sum_probs=41.9
Q ss_pred eEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecC----HHHHHHHHHH
Q 015091 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD----RSCAEEALRM 337 (413)
Q Consensus 284 ~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~----~~~a~~a~~~ 337 (413)
+|.|.|+.=..-...|+..+...-.|.++.+....+.+.|+|.. .++-.++++.
T Consensus 6 ~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~ 63 (72)
T d1osda_ 6 TLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATAD 63 (72)
T ss_dssp EEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHH
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHh
Confidence 45677776666778899999999899999999999999999954 3445555554
No 192
>d2v94a1 d.12.1.3 (A:1-93) Ribosomal protein S24e {Pyrococcus abyssi [TaxId: 29292]}
Probab=32.92 E-value=53 Score=21.23 Aligned_cols=49 Identities=14% Similarity=0.150 Sum_probs=29.5
Q ss_pred CCCCHHHHHHHHhhhCCCcceeEEEEcC--CCCCCceeEEEE-eCCHHHHHH
Q 015091 183 ADVTDYMLQETFRARYPSTKGAKVVIDR--LTGRTKGYGFVR-FGDESEQLR 231 (413)
Q Consensus 183 ~~~~~~~l~~~f~~~~g~v~~~~~~~~~--~~g~~~g~afv~-f~~~~~a~~ 231 (413)
.+.+..++++.+.+.++.-.+..++..- .-|..+..||+. |+|.+.|.+
T Consensus 29 ~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~IYd~~e~~kk 80 (93)
T d2v94a1 29 PTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGSYKSKGYAKYYYDKDRMLY 80 (93)
T ss_dssp CCCCHHHHHHHHHHHHTCCGGGEEEEEEECCTTCSEEEEEEEEESSHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEEeCccCCCCceEEEEEEEECCHHHHHh
Confidence 4667788888776777765555554432 345555555553 666666544
No 193
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=31.93 E-value=35 Score=23.07 Aligned_cols=44 Identities=14% Similarity=-0.029 Sum_probs=29.8
Q ss_pred HHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhCCC
Q 015091 96 TYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGT 146 (413)
Q Consensus 96 ~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~g~ 146 (413)
.++++.+..+|... +.+ . |- -...|..|.+.++|+++.+.|...
T Consensus 66 ~~~~~~l~~~g~~~-~~m-S----GS-Gst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMRALGLRG-VLM-S----GS-GSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHTTCEE-EEE-C----TT-SSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhh-eee-c----CC-CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 44556667777532 322 2 22 246899999999999999988664
No 194
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=31.33 E-value=8.4 Score=19.78 Aligned_cols=12 Identities=33% Similarity=0.792 Sum_probs=10.2
Q ss_pred CHHHHHHHHhcC
Q 015091 295 TDEHLRELFSQY 306 (413)
Q Consensus 295 ~~~~l~~~f~~~ 306 (413)
|+++|++.|.-|
T Consensus 1 seeel~eAF~~F 12 (33)
T d2hf5a1 1 SEEEIREAFRVF 12 (33)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 578999999877
No 195
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=28.61 E-value=56 Score=19.54 Aligned_cols=57 Identities=7% Similarity=0.131 Sum_probs=45.0
Q ss_pred CceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecC----HHHHHHHHHHh
Q 015091 282 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD----RSCAEEALRML 338 (413)
Q Consensus 282 ~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~----~~~a~~a~~~l 338 (413)
..++.|.|+.=..-...|.+.+...-.|.++.+.-..+.+.|+|++ .++..++++.+
T Consensus 7 ~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~ 67 (72)
T d1p6ta1 7 EIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKL 67 (72)
T ss_dssp EEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHH
T ss_pred EEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 3467888887766778899999999999999998888899999953 45666666654
No 196
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=28.55 E-value=61 Score=19.87 Aligned_cols=54 Identities=7% Similarity=0.089 Sum_probs=43.3
Q ss_pred eEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEec----CHHHHHHHHHH
Q 015091 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA----DRSCAEEALRM 337 (413)
Q Consensus 284 ~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~----~~~~a~~a~~~ 337 (413)
.+.|.|+.=..-...|+..+...-.|.++.+.-..+.+.|+|. +.++..++|..
T Consensus 5 ~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~ 62 (79)
T d1p6ta2 5 EFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDK 62 (79)
T ss_dssp EEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHH
T ss_pred EEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHH
Confidence 4678888777777889999999889999999989999999995 33555556655
No 197
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}
Probab=27.83 E-value=57 Score=19.30 Aligned_cols=54 Identities=15% Similarity=0.156 Sum_probs=41.5
Q ss_pred eEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecC----HHHHHHHHHH
Q 015091 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD----RSCAEEALRM 337 (413)
Q Consensus 284 ~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~----~~~a~~a~~~ 337 (413)
.+.|.|+.=..-...|++.++..-.|.++.+....+.+-|+|.. .++..++++.
T Consensus 3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~ 60 (68)
T d1cpza_ 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINE 60 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHT
T ss_pred EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHh
Confidence 46777776666677899999999899999999999999999954 3344445543
No 198
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.41 E-value=67 Score=19.65 Aligned_cols=58 Identities=9% Similarity=0.023 Sum_probs=46.7
Q ss_pred CcceeeecCCCCCCCHHHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEc----CHHHHHHHHHHh
Q 015091 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI----SRAGAERVLQTF 143 (413)
Q Consensus 80 ~~~~l~v~~lp~~~~~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~----~~~~A~~a~~~l 143 (413)
..-+|.|.++.-..-...|...++..-.|.++.+-... +.+-|+|. +.++..++++.+
T Consensus 8 ~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~------~~v~v~~d~~~~~~~~i~~~i~~~ 69 (79)
T d1kvja_ 8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEE------KNATIIYDPKLQTPKTLQEAIDDM 69 (79)
T ss_dssp EEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTT------TEEEEEECTTTCCHHHHHHHHHHH
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCC------CEEEEEECCCCCCHHHHHHHHHhc
Confidence 34578999999888889999999999889999886654 57888884 667777777764
No 199
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.79 E-value=65 Score=19.33 Aligned_cols=56 Identities=14% Similarity=0.113 Sum_probs=41.7
Q ss_pred ceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCH--HHHHHHHHHh
Q 015091 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADR--SCAEEALRML 338 (413)
Q Consensus 283 ~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~--~~a~~a~~~l 338 (413)
.++.|.|+.=..-...|.+.+...-.|.++.+.-..+.+.|+|... ++..+++..+
T Consensus 5 ~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~ 62 (73)
T d1mwza_ 5 YSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKA 62 (73)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHH
T ss_pred EEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHHHc
Confidence 4566666655556678999999998999999988889999999644 4445555554
No 200
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}
Probab=25.45 E-value=61 Score=18.87 Aligned_cols=54 Identities=9% Similarity=0.032 Sum_probs=38.2
Q ss_pred eEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEec-CHHHHHHHHHH
Q 015091 284 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA-DRSCAEEALRM 337 (413)
Q Consensus 284 ~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~-~~~~a~~a~~~ 337 (413)
++.|.|+.=..-...|++.+.....|.++.+....+.+.|++. +.++-.+++..
T Consensus 4 ~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~ 58 (64)
T d1sb6a_ 4 QLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIAS 58 (64)
T ss_dssp EEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHH
T ss_pred EEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHH
Confidence 4566676655556678888887777889999888888888875 44445555554
No 201
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.85 E-value=79 Score=19.62 Aligned_cols=55 Identities=4% Similarity=0.094 Sum_probs=43.3
Q ss_pred ceEEEecCCCCCCHHHHHHHHhcCCCeEEEEeeCCCcEEEEEecCH----HHHHHHHHH
Q 015091 283 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADR----SCAEEALRM 337 (413)
Q Consensus 283 ~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v~~~~~~~~afV~f~~~----~~a~~a~~~ 337 (413)
-+|.|.++.=..-...|+..+...-.|.++.+.-..+.+-|+|... +...++|+.
T Consensus 11 v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~ 69 (84)
T d1q8la_ 11 LKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEA 69 (84)
T ss_dssp EEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHH
T ss_pred EEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHH
Confidence 4577888877777788999999988899999988888999998743 444556654
No 202
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375 {environmental samples}
Probab=23.42 E-value=97 Score=20.51 Aligned_cols=49 Identities=10% Similarity=-0.071 Sum_probs=34.7
Q ss_pred HHHHHHhhccCceEEEEEEecCCCCCcccEEEEEEcCHHHHHHHHHHhC
Q 015091 96 TYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144 (413)
Q Consensus 96 ~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~A~~a~~~l~ 144 (413)
+++.+.|...|-+.-....--...|..+-..+-+|+|+++-.+|...+.
T Consensus 32 ~~~~~~Lk~~Gl~r~~~~~iwNk~~~fr~~~i~EYkd~~Afk~Cq~i~~ 80 (109)
T d2od6a1 32 PVWVKEMKSRGLLKFSMNRVWNKGEVFRVVMTYEYKDRASFEANIAYLE 80 (109)
T ss_dssp HHHHHHHHTTTEEEEEEEEECSSSSCEEEEEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCceEEEEEEeCCCCcEEEEEEEEECCHHHHHHHHHHHH
Confidence 4455667778876555443333357778888999999999999987654
No 203
>d1vqos1 d.12.1.1 (S:1-81) Ribosomal protein L23 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=21.80 E-value=41 Score=21.15 Aligned_cols=50 Identities=14% Similarity=0.270 Sum_probs=35.2
Q ss_pred EEEecCCCCCCHHHHHHHHhc-CC-CeEEEEee---CCCcEEEEEecCHHHHHHH
Q 015091 285 VFVGNLDSIVTDEHLRELFSQ-YG-QLVHVKIP---AGKRCGFVQFADRSCAEEA 334 (413)
Q Consensus 285 l~v~nlp~~~~~~~l~~~f~~-~G-~i~~v~~~---~~~~~afV~f~~~~~a~~a 334 (413)
.|+-.++...+..+|++.++. |+ .|..|... ..+..|||++.....|...
T Consensus 23 ~y~F~V~~~A~K~~IK~AVe~lf~VkV~~Vnt~~~~~~~KkA~V~L~~~~~a~di 77 (81)
T d1vqos1 23 KLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEV 77 (81)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHCCCEEEEEEEECTTSSEEEEEEECTTSCHHHH
T ss_pred EEEEEEcCcCCHHHHHHHHHHHcCCceeEEEEeEcCCCcEEEEEEeCCCCcHHHH
Confidence 455566788999999998875 44 45666543 2357899999877766554
No 204
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375 {environmental samples}
Probab=21.17 E-value=1.1e+02 Score=20.24 Aligned_cols=73 Identities=8% Similarity=-0.005 Sum_probs=52.9
Q ss_pred cEEEEEEcCHHHHHHHHHHhCCCcCCCCCcceeeeeccCCCCCCCCCCCCceEEecCCCCCCCHHHHHHHHhhhCCCcce
Q 015091 124 GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKG 203 (413)
Q Consensus 124 g~afV~f~~~~~A~~a~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~lp~~~~~~~l~~~f~~~~g~v~~ 203 (413)
.|..+.|.++.+.+..+..... ..+++.+.| +..|-+..
T Consensus 8 s~t~~dF~se~dmel~~~~~e~----------------------------------------~~~~~~~~L-k~~Gl~r~ 46 (109)
T d2od6a1 8 SFTTADFINDVDMELFIDAVEK----------------------------------------TAPVWVKEM-KSRGLLKF 46 (109)
T ss_dssp EEEEEEESSHHHHHHHHHHHHH----------------------------------------HHHHHHHHH-HTTTEEEE
T ss_pred EEEEEEcCCHHHHHHHHHHHHH----------------------------------------HHHHHHHHH-HHcCCceE
Confidence 4778889999998888865222 125677778 77887766
Q ss_pred eEEEEcCCCCCCceeEEEEeCCHHHHHHHHHhhC
Q 015091 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237 (413)
Q Consensus 204 ~~~~~~~~~g~~~g~afv~f~~~~~a~~a~~~l~ 237 (413)
.....-...|..+-....+|.|.++-++|.+-+.
T Consensus 47 ~~~~iwNk~~~fr~~~i~EYkd~~Afk~Cq~i~~ 80 (109)
T d2od6a1 47 SMNRVWNKGEVFRVVMTYEYKDRASFEANIAYLE 80 (109)
T ss_dssp EEEEECSSSSCEEEEEEEEESSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCcEEEEEEEEECCHHHHHHHHHHHH
Confidence 5544444467778888999999999999986543
No 205
>d2dyja1 d.52.7.1 (A:4-94) Ribosome-binding factor A, RbfA {Thermus thermophilus [TaxId: 274]}
Probab=21.04 E-value=42 Score=21.50 Aligned_cols=32 Identities=22% Similarity=0.080 Sum_probs=20.4
Q ss_pred CCeEEEEeeCCCcEEEEEecCHHHHHHHHHHh
Q 015091 307 GQLVHVKIPAGKRCGFVQFADRSCAEEALRML 338 (413)
Q Consensus 307 G~i~~v~~~~~~~~afV~f~~~~~a~~a~~~l 338 (413)
=.|.+|++..|...|.|.|....+...++..|
T Consensus 28 vtIt~V~~S~Dl~~akVyvs~~~~~~~~~~~L 59 (91)
T d2dyja1 28 LTVEAVRLSKDGSVLSVYVEAFREEEGALRAL 59 (91)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCHHHHHHHH
T ss_pred eEEEEEEECCCcccEEEEEEeccchHHHHHHH
Confidence 35889999999888877665333333444444
Done!