Your job contains 1 sequence.
>015093
MEGIAPEGSGFDARSFDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTREL
AQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRP
DYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMR
SRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015093
(413 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2020078 - symbol:EIF4A-2 "eif4a-2" species:370... 1900 3.4e-196 1
TAIR|locus:2030285 - symbol:AT1G72730 species:3702 "Arabi... 1858 9.5e-192 1
TAIR|locus:2088237 - symbol:EIF4A1 "eukaryotic translatio... 1809 1.5e-186 1
ZFIN|ZDB-GENE-040426-2802 - symbol:eif4a2 "eukaryotic tra... 1470 1.2e-150 1
UNIPROTKB|Q3SZ65 - symbol:EIF4A2 "Eukaryotic initiation f... 1467 2.6e-150 1
UNIPROTKB|E2R3J1 - symbol:EIF4A2 "Uncharacterized protein... 1467 2.6e-150 1
UNIPROTKB|Q14240 - symbol:EIF4A2 "Eukaryotic initiation f... 1467 2.6e-150 1
UNIPROTKB|A6M930 - symbol:EIF4A2 "Eukaryotic translation ... 1467 2.6e-150 1
MGI|MGI:106906 - symbol:Eif4a2 "eukaryotic translation in... 1467 2.6e-150 1
RGD|1309225 - symbol:Eif4a2 "eukaryotic translation initi... 1467 2.6e-150 1
UNIPROTKB|F8WFX2 - symbol:Eif4a2 "Eukaryotic initiation f... 1467 2.6e-150 1
UNIPROTKB|Q8JFP1 - symbol:EIF4A2 "Eukaryotic initiation f... 1466 3.3e-150 1
ZFIN|ZDB-GENE-040120-6 - symbol:eif4a1b "eukaryotic trans... 1459 1.8e-149 1
UNIPROTKB|Q3SZ54 - symbol:EIF4A1 "Eukaryotic initiation f... 1456 3.8e-149 1
UNIPROTKB|J9NY67 - symbol:EIF4A1 "Uncharacterized protein... 1456 3.8e-149 1
UNIPROTKB|P60842 - symbol:EIF4A1 "Eukaryotic initiation f... 1456 3.8e-149 1
UNIPROTKB|A6M928 - symbol:EIF4A1 "Uncharacterized protein... 1456 3.8e-149 1
MGI|MGI:95303 - symbol:Eif4a1 "eukaryotic translation ini... 1456 3.8e-149 1
UNIPROTKB|Q6P3V8 - symbol:Eif4a1 "Protein Eif4a1" species... 1456 3.8e-149 1
UNIPROTKB|F1P895 - symbol:EIF4A1 "Uncharacterized protein... 1450 1.6e-148 1
ZFIN|ZDB-GENE-031030-2 - symbol:eif4a1a "eukaryotic trans... 1449 2.1e-148 1
POMBASE|SPAC1006.07 - symbol:SPAC1006.07 "translation ini... 1420 2.5e-145 1
UNIPROTKB|A4QVP2 - symbol:TIF1 "ATP-dependent RNA helicas... 1417 5.1e-145 1
UNIPROTKB|I3LLD5 - symbol:I3LLD5 "Uncharacterized protein... 1410 2.8e-144 1
FB|FBgn0001942 - symbol:eIF-4a "Eukaryotic initiation fac... 1407 5.9e-144 1
ASPGD|ASPL0000037981 - symbol:AN2932 species:162425 "Emer... 1391 2.9e-142 1
WB|WBGene00002083 - symbol:inf-1 species:6239 "Caenorhabd... 1363 2.7e-139 1
GENEDB_PFALCIPARUM|PF14_0655 - symbol:PF14_0655 "RNA heli... 1333 4.1e-136 1
UNIPROTKB|Q8IKF0 - symbol:H45 "Helicase 45" species:36329... 1333 4.1e-136 1
ZFIN|ZDB-GENE-040426-915 - symbol:eif4a3 "eukaryotic tran... 1333 4.1e-136 1
UNIPROTKB|Q2NL22 - symbol:EIF4A3 "Eukaryotic initiation f... 1318 1.6e-134 1
UNIPROTKB|E2RDZ4 - symbol:EIF4A3 "Uncharacterized protein... 1318 1.6e-134 1
UNIPROTKB|P38919 - symbol:EIF4A3 "Eukaryotic initiation f... 1318 1.6e-134 1
UNIPROTKB|A6M931 - symbol:EIF4A3 "Eukaryotic initiation f... 1318 1.6e-134 1
RGD|1591139 - symbol:Eif4a3 "eukaryotic translation initi... 1318 1.6e-134 1
UNIPROTKB|Q5ZM36 - symbol:EIF4A3 "Eukaryotic initiation f... 1317 2.0e-134 1
UNIPROTKB|J9NU36 - symbol:EIF4A1 "Uncharacterized protein... 1316 2.6e-134 1
FB|FBgn0037573 - symbol:eIF4AIII "eIF4AIII" species:7227 ... 1307 2.3e-133 1
ASPGD|ASPL0000014018 - symbol:fal1 species:162425 "Emeric... 1299 1.6e-132 1
WB|WBGene00022029 - symbol:Y65B4A.6 species:6239 "Caenorh... 1298 2.1e-132 1
WB|WBGene00018007 - symbol:F33D11.10 species:6239 "Caenor... 1297 2.7e-132 1
DICTYBASE|DDB_G0269146 - symbol:ifdA "eukaryotic translat... 1293 7.1e-132 1
UNIPROTKB|E7EQG2 - symbol:EIF4A2 "Eukaryotic initiation f... 1285 5.0e-131 1
POMBASE|SPAC1F5.10 - symbol:SPAC1F5.10 "ATP-dependent RNA... 1285 5.0e-131 1
TAIR|locus:2091191 - symbol:EIF4A-III "eukaryotic initiat... 1273 9.3e-130 1
UNIPROTKB|F1RZ83 - symbol:EIF4A3 "Eukaryotic initiation f... 1264 8.4e-129 1
DICTYBASE|DDB_G0269192 - symbol:tifA "eukaryotic translat... 1220 3.9e-124 1
CGD|CAL0004095 - symbol:TIF species:5476 "Candida albican... 1214 1.7e-123 1
UNIPROTKB|P87206 - symbol:TIF1 "ATP-dependent RNA helicas... 1214 1.7e-123 1
SGD|S000001767 - symbol:TIF1 "Translation initiation fact... 1206 1.2e-122 1
SGD|S000003674 - symbol:TIF2 "Translation initiation fact... 1206 1.2e-122 1
CGD|CAL0001638 - symbol:FAL1 species:5476 "Candida albica... 1202 3.1e-122 1
UNIPROTKB|J3KT12 - symbol:EIF4A1 "Eukaryotic initiation f... 1161 6.9e-118 1
UNIPROTKB|F1NTS2 - symbol:EIF4A3 "Eukaryotic initiation f... 1156 2.3e-117 1
SGD|S000002428 - symbol:FAL1 "Nucleolar protein required ... 1155 3.0e-117 1
TAIR|locus:2008296 - symbol:AT1G51380 species:3702 "Arabi... 1149 1.3e-116 1
UNIPROTKB|F1LP27 - symbol:Eif4a2 "Eukaryotic initiation f... 1142 7.1e-116 1
GENEDB_PFALCIPARUM|PFD1070w - symbol:PFD1070w "eukaryotic... 1141 9.1e-116 1
UNIPROTKB|Q8IFN9 - symbol:PFD1070w "Eukaryotic initiation... 1141 9.1e-116 1
UNIPROTKB|Q9NZE6 - symbol:EIF4A2 "BM-010" species:9606 "H... 1139 1.5e-115 1
UNIPROTKB|E1BSE5 - symbol:EIF4A3 "Eukaryotic initiation f... 1129 1.7e-114 1
UNIPROTKB|J3QS69 - symbol:EIF4A1 "Eukaryotic initiation f... 1003 3.8e-101 1
UNIPROTKB|J3QL43 - symbol:EIF4A1 "Eukaryotic initiation f... 648 8.0e-91 2
UNIPROTKB|J3KTB5 - symbol:EIF4A1 "Eukaryotic initiation f... 899 4.0e-90 1
WB|WBGene00018997 - symbol:F57B9.3 species:6239 "Caenorha... 865 1.6e-86 1
UNIPROTKB|J3KSZ0 - symbol:EIF4A1 "Eukaryotic initiation f... 826 2.2e-82 1
CGD|CAL0006152 - symbol:DHH1 species:5476 "Candida albica... 722 2.3e-71 1
UNIPROTKB|Q5AAW3 - symbol:DHH1 "ATP-dependent RNA helicas... 722 2.3e-71 1
UNIPROTKB|A4R715 - symbol:DHH1 "ATP-dependent RNA helicas... 707 8.9e-70 1
SGD|S000002319 - symbol:DHH1 "Cytoplasmic DExD/H-box heli... 703 2.4e-69 1
UNIPROTKB|E1BDM8 - symbol:DDX6 "Uncharacterized protein" ... 697 1.0e-68 1
UNIPROTKB|E2RR01 - symbol:DDX6 "Uncharacterized protein" ... 697 1.0e-68 1
UNIPROTKB|P26196 - symbol:DDX6 "Probable ATP-dependent RN... 697 1.0e-68 1
UNIPROTKB|F1SAJ5 - symbol:DDX6 "Uncharacterized protein" ... 697 1.0e-68 1
MGI|MGI:104976 - symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box ... 697 1.0e-68 1
RGD|1564560 - symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box hel... 697 1.0e-68 1
TAIR|locus:2098886 - symbol:AT3G61240 species:3702 "Arabi... 697 1.0e-68 1
TAIR|locus:2127043 - symbol:RH8 "RNAhelicase-like 8" spec... 696 1.3e-68 1
CGD|CAL0000067 - symbol:DBP5 species:5476 "Candida albica... 694 2.1e-68 1
TAIR|locus:2050715 - symbol:AT2G45810 species:3702 "Arabi... 694 2.1e-68 1
UNIPROTKB|Q5ZKB9 - symbol:DDX6 "Probable ATP-dependent RN... 693 2.7e-68 1
UNIPROTKB|A0R8U6 - symbol:cshA "DEAD-box ATP-dependent RN... 693 2.7e-68 1
UNIPROTKB|Q63GX5 - symbol:cshA "DEAD-box ATP-dependent RN... 693 2.7e-68 1
UNIPROTKB|Q6HPE6 - symbol:cshA "DEAD-box ATP-dependent RN... 693 2.7e-68 1
UNIPROTKB|Q73EU1 - symbol:cshA "DEAD-box ATP-dependent RN... 693 2.7e-68 1
UNIPROTKB|Q81IT9 - symbol:cshA "DEAD-box ATP-dependent RN... 693 2.7e-68 1
UNIPROTKB|Q81VG0 - symbol:cshA "DEAD-box ATP-dependent RN... 693 2.7e-68 1
TIGR_CMR|BA_0247 - symbol:BA_0247 "ATP-dependent RNA heli... 693 2.7e-68 1
ASPGD|ASPL0000065093 - symbol:AN7659 species:162425 "Emer... 691 4.4e-68 1
UNIPROTKB|Q5L3G9 - symbol:cshA "DEAD-box ATP-dependent RN... 691 4.4e-68 1
UNIPROTKB|P54824 - symbol:ddx6 "ATP-dependent RNA helicas... 690 5.6e-68 1
UNIPROTKB|E1C8R1 - symbol:DDX6 "Probable ATP-dependent RN... 688 9.2e-68 1
ZFIN|ZDB-GENE-030131-6611 - symbol:wu:fk48d07 "wu:fk48d07... 687 1.2e-67 1
POMBASE|SPBC776.09 - symbol:ste13 "ATP-dependent RNA heli... 686 1.5e-67 1
WB|WBGene00000479 - symbol:cgh-1 species:6239 "Caenorhabd... 678 1.1e-66 1
UNIPROTKB|Q95YF3 - symbol:cgh-1 "ATP-dependent RNA helica... 678 1.1e-66 1
TIGR_CMR|SO_4034 - symbol:SO_4034 "ATP-dependent RNA heli... 677 1.3e-66 1
SGD|S000005572 - symbol:DBP5 "Cytoplasmic ATP-dependent R... 676 1.7e-66 1
UNIPROTKB|Q65N62 - symbol:cshA "DEAD-box ATP-dependent RN... 675 2.2e-66 1
UNIPROTKB|P96614 - symbol:cshA "DEAD-box ATP-dependent RN... 672 4.5e-66 1
WARNING: Descriptions of 843 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2020078 [details] [associations]
symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
Uniprot:P41377
Length = 412
Score = 1900 (673.9 bits), Expect = 3.4e-196, P = 3.4e-196
Identities = 370/414 (89%), Positives = 392/414 (94%)
Query: 1 MEGIAPEGSGFDARSFDSNMNNLLSEEGQD-FFVSYDEVYDSFDSMGLKENLLRGIYAYG 59
M G APEG+ FD R FD +N +L +GQD FF SYDEV++SFD+MGL+ENLLRGIYAYG
Sbjct: 1 MAGSAPEGTQFDTRQFDQRLNEVL--DGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYG 58
Query: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRE 119
FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LQCQALVLAPTRE
Sbjct: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRE 118
Query: 120 LAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLR 179
LAQQIEKVMRALGDY GVKVHACVGGTSVREDQRIL AGVHVVVGTPGRVFDMLRRQSLR
Sbjct: 119 LAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 178
Query: 180 PDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
PD I+MFVLDEADEMLSRGFKDQIYDIFQ LP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 179 PDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 238
Query: 240 RILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQM 299
RILVKRDELTLEGIKQF+VNV+KE+WKL+TLCDLYETLAITQSVIFVNTRRKVDWLTD+M
Sbjct: 239 RILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 298
Query: 300 RSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 359
RSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 299 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 358
Query: 360 PENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
PENYLHRIGRSGRFGRKGVAINFVT DD RML DIQ+FYNVV+EELP+NVADL+
Sbjct: 359 PENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNVADLL 412
>TAIR|locus:2030285 [details] [associations]
symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
Uniprot:Q9CAI7
Length = 414
Score = 1858 (659.1 bits), Expect = 9.5e-192, P = 9.5e-192
Identities = 356/414 (85%), Positives = 390/414 (94%)
Query: 1 MEGIAPEGSGFDARSFDSNMNNLLSEEGQD-FFVSYDEVYDSFDSMGLKENLLRGIYAYG 59
M G+A +G+ +D R FD+ MN +L EEG++ F+ +YDEV DSFD+M L+ +LLRGIYAYG
Sbjct: 1 MAGMASDGTQYDPRQFDTKMNAILGEEGEETFYTNYDEVCDSFDAMELQPDLLRGIYAYG 60
Query: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRE 119
FEKPSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLD +QCQALVLAPTRE
Sbjct: 61 FEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRE 120
Query: 120 LAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLR 179
LAQQIEKVMRALGDY+GVK ACVGGTSVREDQR+L +GVHVVVGTPGRVFD+LRRQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLR 180
Query: 180 PDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
D I+MFVLDEADEMLSRGFKDQIYDIFQ LP K+QVGVFSATMPPEALEITRKFMNKPV
Sbjct: 181 ADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPV 240
Query: 240 RILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQM 299
RILVKRDELTLEGIKQF+VNVDKEEWKL+TLCDLYETLAITQSVIFVNTRRKVDWLTD+M
Sbjct: 241 RILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300
Query: 300 RSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 359
RSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 360
Query: 360 PENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
PENYLHRIGRSGRFGRKGVAINF+T +D+RM+ADIQRFYNVV+EELP+NVADL+
Sbjct: 361 PENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVVEELPSNVADLL 414
>TAIR|locus:2088237 [details] [associations]
symbol:EIF4A1 "eukaryotic translation initiation factor
4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
Uniprot:F4JEL4
Length = 415
Score = 1809 (641.9 bits), Expect = 1.5e-186, P = 1.5e-186
Identities = 352/392 (89%), Positives = 374/392 (95%)
Query: 1 MEGIAPEGSGFDARSFDSNMNNLLSEEGQD-FFVSYDEVYDSFDSMGLKENLLRGIYAYG 59
M G APEG+ FDAR FD +N +L EGQD FF SYD+V++SFD+MGL+ENLLRGIYAYG
Sbjct: 1 MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYG 58
Query: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRE 119
FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ +QCQALVLAPTRE
Sbjct: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 118
Query: 120 LAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLR 179
LAQQIEKVMRALGDY+GVKVHACVGGTSVREDQRIL AGVHVVVGTPGRVFDML+RQSLR
Sbjct: 119 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 178
Query: 180 PDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
D I+MFVLDEADEMLSRGFKDQIYDIFQ LP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 179 ADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 238
Query: 240 RILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQM 299
RILVKRDELTLEGIKQF+VNV+KEEWKL+TLCDLYETLAITQSVIFVNTRRKVDWLTD+M
Sbjct: 239 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 298
Query: 300 RSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 359
RSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 299 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 358
Query: 360 PENYLHRIGRSGRFGRKGVAINFVTRDDDRML 391
PENYLHRIGRSGRFGRKGVAINFVTRDD+RML
Sbjct: 359 PENYLHRIGRSGRFGRKGVAINFVTRDDERML 390
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 1470 (522.5 bits), Expect = 1.2e-150, P = 1.2e-150
Identities = 283/381 (74%), Positives = 325/381 (85%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+++E+ D+FD M LKE LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 31 NWNEITDNFDDMNLKETLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTAT 90
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVRED-Q 152
F ILQQL+ E + QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR + Q
Sbjct: 91 FAISILQQLEIEQKETQALVLAPTRELAQQIQKVILALGDYMGASCHACIGGTNVRNEMQ 150
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
++ + H+VVGTPGRVFDML R+ L P +I+MFVLDEADEMLSRGFKDQIY+IFQ L
Sbjct: 151 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLST 210
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
IQV + SATMP + LE+T KFM +PVRILVK++ELTLEGIKQF++NV++EEWKLDTLCD
Sbjct: 211 NIQVVLLSATMPADVLEVTTKFMREPVRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 270
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332
LYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA HGDMDQ RDIIMREFRSGSSRV
Sbjct: 271 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSRV 330
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLA 392
LITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D R+L
Sbjct: 331 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILR 390
Query: 393 DIQRFYNVVIEELPANVADLI 413
DI+ FYN +EE+P NVADLI
Sbjct: 391 DIETFYNTTVEEMPMNVADLI 411
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 1467 (521.5 bits), Expect = 2.6e-150, P = 2.6e-150
Identities = 281/381 (73%), Positives = 326/381 (85%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+++E+ D+FD M LKE+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 27 NWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTAT 86
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVRED-Q 152
F ILQQL+ E + QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR + Q
Sbjct: 87 FAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 146
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
++ + H+VVGTPGRVFDML R+ L P +I+MFVLDEADEMLSRGFKDQIY+IFQ L
Sbjct: 147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNT 206
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++NV++EEWKLDTLCD
Sbjct: 207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332
LYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA HGDMDQ RD+IMREFRSGSSRV
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLA 392
LITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D R+L
Sbjct: 327 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILR 386
Query: 393 DIQRFYNVVIEELPANVADLI 413
DI+ FYN +EE+P NVADLI
Sbjct: 387 DIETFYNTTVEEMPMNVADLI 407
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 1467 (521.5 bits), Expect = 2.6e-150, P = 2.6e-150
Identities = 281/381 (73%), Positives = 326/381 (85%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+++E+ D+FD M LKE+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 27 NWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTAT 86
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVRED-Q 152
F ILQQL+ E + QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR + Q
Sbjct: 87 FAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 146
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
++ + H+VVGTPGRVFDML R+ L P +I+MFVLDEADEMLSRGFKDQIY+IFQ L
Sbjct: 147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNT 206
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++NV++EEWKLDTLCD
Sbjct: 207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332
LYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA HGDMDQ RD+IMREFRSGSSRV
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLA 392
LITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D R+L
Sbjct: 327 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILR 386
Query: 393 DIQRFYNVVIEELPANVADLI 413
DI+ FYN +EE+P NVADLI
Sbjct: 387 DIETFYNTTVEEMPMNVADLI 407
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 1467 (521.5 bits), Expect = 2.6e-150, P = 2.6e-150
Identities = 281/381 (73%), Positives = 326/381 (85%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+++E+ D+FD M LKE+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 27 NWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTAT 86
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVRED-Q 152
F ILQQL+ E + QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR + Q
Sbjct: 87 FAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 146
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
++ + H+VVGTPGRVFDML R+ L P +I+MFVLDEADEMLSRGFKDQIY+IFQ L
Sbjct: 147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNT 206
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++NV++EEWKLDTLCD
Sbjct: 207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332
LYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA HGDMDQ RD+IMREFRSGSSRV
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLA 392
LITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D R+L
Sbjct: 327 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILR 386
Query: 393 DIQRFYNVVIEELPANVADLI 413
DI+ FYN +EE+P NVADLI
Sbjct: 387 DIETFYNTTVEEMPMNVADLI 407
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 1467 (521.5 bits), Expect = 2.6e-150, P = 2.6e-150
Identities = 281/381 (73%), Positives = 326/381 (85%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+++E+ D+FD M LKE+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 27 NWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTAT 86
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVRED-Q 152
F ILQQL+ E + QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR + Q
Sbjct: 87 FAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 146
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
++ + H+VVGTPGRVFDML R+ L P +I+MFVLDEADEMLSRGFKDQIY+IFQ L
Sbjct: 147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNT 206
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++NV++EEWKLDTLCD
Sbjct: 207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332
LYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA HGDMDQ RD+IMREFRSGSSRV
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLA 392
LITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D R+L
Sbjct: 327 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILR 386
Query: 393 DIQRFYNVVIEELPANVADLI 413
DI+ FYN +EE+P NVADLI
Sbjct: 387 DIETFYNTTVEEMPMNVADLI 407
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 1467 (521.5 bits), Expect = 2.6e-150, P = 2.6e-150
Identities = 281/381 (73%), Positives = 326/381 (85%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+++E+ D+FD M LKE+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 27 NWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTAT 86
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVRED-Q 152
F ILQQL+ E + QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR + Q
Sbjct: 87 FAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 146
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
++ + H+VVGTPGRVFDML R+ L P +I+MFVLDEADEMLSRGFKDQIY+IFQ L
Sbjct: 147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNT 206
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++NV++EEWKLDTLCD
Sbjct: 207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332
LYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA HGDMDQ RD+IMREFRSGSSRV
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLA 392
LITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D R+L
Sbjct: 327 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILR 386
Query: 393 DIQRFYNVVIEELPANVADLI 413
DI+ FYN +EE+P NVADLI
Sbjct: 387 DIETFYNTTVEEMPMNVADLI 407
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 1467 (521.5 bits), Expect = 2.6e-150, P = 2.6e-150
Identities = 281/381 (73%), Positives = 326/381 (85%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+++E+ D+FD M LKE+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 27 NWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTAT 86
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVRED-Q 152
F ILQQL+ E + QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR + Q
Sbjct: 87 FAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 146
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
++ + H+VVGTPGRVFDML R+ L P +I+MFVLDEADEMLSRGFKDQIY+IFQ L
Sbjct: 147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNT 206
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++NV++EEWKLDTLCD
Sbjct: 207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332
LYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA HGDMDQ RD+IMREFRSGSSRV
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLA 392
LITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D R+L
Sbjct: 327 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILR 386
Query: 393 DIQRFYNVVIEELPANVADLI 413
DI+ FYN +EE+P NVADLI
Sbjct: 387 DIETFYNTTVEEMPMNVADLI 407
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 1467 (521.5 bits), Expect = 2.6e-150, P = 2.6e-150
Identities = 281/381 (73%), Positives = 326/381 (85%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+++E+ D+FD M LKE+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 28 NWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTAT 87
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVRED-Q 152
F ILQQL+ E + QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR + Q
Sbjct: 88 FAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 147
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
++ + H+VVGTPGRVFDML R+ L P +I+MFVLDEADEMLSRGFKDQIY+IFQ L
Sbjct: 148 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNT 207
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++NV++EEWKLDTLCD
Sbjct: 208 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 267
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332
LYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA HGDMDQ RD+IMREFRSGSSRV
Sbjct: 268 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 327
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLA 392
LITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D R+L
Sbjct: 328 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILR 387
Query: 393 DIQRFYNVVIEELPANVADLI 413
DI+ FYN +EE+P NVADLI
Sbjct: 388 DIETFYNTTVEEMPMNVADLI 408
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 1466 (521.1 bits), Expect = 3.3e-150, P = 3.3e-150
Identities = 280/381 (73%), Positives = 327/381 (85%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+++E+ D+FD M LKE+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 27 NWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTAT 86
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVRED-Q 152
F ILQQL+ + + QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR + Q
Sbjct: 87 FAISILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 146
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
++ + H+VVGTPGRVFDML R+ L P +I+MFVLDEADEMLSRGFKDQIY+IFQ L
Sbjct: 147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLST 206
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
IQV + SATMP + LE+T+KFM +P+RILVK++ELTLEGIKQF++NV++EEWKLDTLCD
Sbjct: 207 NIQVVLLSATMPMDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332
LYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA HGDMDQ RD+IMREFRSGSSRV
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLA 392
LITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D R+L
Sbjct: 327 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILR 386
Query: 393 DIQRFYNVVIEELPANVADLI 413
DI+ FYN +EE+P NVADLI
Sbjct: 387 DIETFYNTTVEEMPMNVADLI 407
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 1459 (518.7 bits), Expect = 1.8e-149, P = 1.8e-149
Identities = 282/381 (74%), Positives = 321/381 (84%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
++DE+ DSFD M L+E LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 49 NWDEIVDSFDDMNLRETLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTAT 108
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVRED-Q 152
F ILQQ+D E QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR + Q
Sbjct: 109 FAISILQQIDIELKGTQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEVQ 168
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
++ + H+VVGTPGRV+DML R+ L YI+MFVLDEADEMLSRGFKDQIY+IFQ L
Sbjct: 169 KLQAEAPHIVVGTPGRVYDMLNRKFLSSKYIKMFVLDEADEMLSRGFKDQIYEIFQKLST 228
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
IQV + SATMP E L++T KFM +PVRILVK++ELTLEGI+QF++NV+KEEWKLDTLCD
Sbjct: 229 SIQVVLLSATMPAEVLDVTTKFMREPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLCD 288
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332
LYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA HGDMDQ RD+IMREFRSGSSRV
Sbjct: 289 LYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKDRDLIMREFRSGSSRV 348
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLA 392
LITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN VT DD R L
Sbjct: 349 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEDDKRTLR 408
Query: 393 DIQRFYNVVIEELPANVADLI 413
DI+ FYN +EE+P NVADLI
Sbjct: 409 DIETFYNTTVEEMPMNVADLI 429
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 1456 (517.6 bits), Expect = 3.8e-149, P = 3.8e-149
Identities = 285/403 (70%), Positives = 330/403 (81%)
Query: 12 DARSFDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGI 71
D+RS D+ + + EG +++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I
Sbjct: 6 DSRSRDNGPDGM-EPEGV-IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAI 63
Query: 72 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRAL 131
+P KG DVI QAQSGTGKTATF ILQQ++ + QALVLAPTRELAQQI+KV+ AL
Sbjct: 64 LPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMAL 123
Query: 132 GDYMGVKVHACVGGTSVR-EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDE 190
GDYMG HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P YI+MFVLDE
Sbjct: 124 GDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDE 183
Query: 191 ADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTL 250
ADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTL
Sbjct: 184 ADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTL 243
Query: 251 EGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATH 310
EGI+QF++NV++EEWKLDTLCDLYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA H
Sbjct: 244 EGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMH 303
Query: 311 GDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRS 370
GDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR
Sbjct: 304 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 363
Query: 371 GRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
GRFGRKGVAIN VT +D R L DI+ FYN IEE+P NVADLI
Sbjct: 364 GRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 1456 (517.6 bits), Expect = 3.8e-149, P = 3.8e-149
Identities = 285/403 (70%), Positives = 330/403 (81%)
Query: 12 DARSFDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGI 71
D+RS D+ + + EG +++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I
Sbjct: 6 DSRSRDNGPDGM-EPEGV-IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAI 63
Query: 72 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRAL 131
+P KG DVI QAQSGTGKTATF ILQQ++ + QALVLAPTRELAQQI+KV+ AL
Sbjct: 64 LPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMAL 123
Query: 132 GDYMGVKVHACVGGTSVR-EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDE 190
GDYMG HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P YI+MFVLDE
Sbjct: 124 GDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDE 183
Query: 191 ADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTL 250
ADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTL
Sbjct: 184 ADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTL 243
Query: 251 EGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATH 310
EGI+QF++NV++EEWKLDTLCDLYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA H
Sbjct: 244 EGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMH 303
Query: 311 GDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRS 370
GDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR
Sbjct: 304 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 363
Query: 371 GRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
GRFGRKGVAIN VT +D R L DI+ FYN IEE+P NVADLI
Sbjct: 364 GRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 1456 (517.6 bits), Expect = 3.8e-149, P = 3.8e-149
Identities = 285/403 (70%), Positives = 330/403 (81%)
Query: 12 DARSFDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGI 71
D+RS D+ + + EG +++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I
Sbjct: 6 DSRSRDNGPDGM-EPEGV-IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAI 63
Query: 72 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRAL 131
+P KG DVI QAQSGTGKTATF ILQQ++ + QALVLAPTRELAQQI+KV+ AL
Sbjct: 64 LPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMAL 123
Query: 132 GDYMGVKVHACVGGTSVR-EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDE 190
GDYMG HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P YI+MFVLDE
Sbjct: 124 GDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDE 183
Query: 191 ADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTL 250
ADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTL
Sbjct: 184 ADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTL 243
Query: 251 EGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATH 310
EGI+QF++NV++EEWKLDTLCDLYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA H
Sbjct: 244 EGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMH 303
Query: 311 GDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRS 370
GDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR
Sbjct: 304 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 363
Query: 371 GRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
GRFGRKGVAIN VT +D R L DI+ FYN IEE+P NVADLI
Sbjct: 364 GRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 1456 (517.6 bits), Expect = 3.8e-149, P = 3.8e-149
Identities = 285/403 (70%), Positives = 330/403 (81%)
Query: 12 DARSFDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGI 71
D+RS D+ + + EG +++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I
Sbjct: 6 DSRSRDNGPDGM-EPEGV-IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAI 63
Query: 72 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRAL 131
+P KG DVI QAQSGTGKTATF ILQQ++ + QALVLAPTRELAQQI+KV+ AL
Sbjct: 64 LPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMAL 123
Query: 132 GDYMGVKVHACVGGTSVR-EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDE 190
GDYMG HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P YI+MFVLDE
Sbjct: 124 GDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDE 183
Query: 191 ADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTL 250
ADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTL
Sbjct: 184 ADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTL 243
Query: 251 EGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATH 310
EGI+QF++NV++EEWKLDTLCDLYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA H
Sbjct: 244 EGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMH 303
Query: 311 GDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRS 370
GDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR
Sbjct: 304 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 363
Query: 371 GRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
GRFGRKGVAIN VT +D R L DI+ FYN IEE+P NVADLI
Sbjct: 364 GRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 1456 (517.6 bits), Expect = 3.8e-149, P = 3.8e-149
Identities = 285/403 (70%), Positives = 330/403 (81%)
Query: 12 DARSFDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGI 71
D+RS D+ + + EG +++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I
Sbjct: 6 DSRSRDNGPDGM-EPEGV-IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAI 63
Query: 72 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRAL 131
+P KG DVI QAQSGTGKTATF ILQQ++ + QALVLAPTRELAQQI+KV+ AL
Sbjct: 64 LPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMAL 123
Query: 132 GDYMGVKVHACVGGTSVR-EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDE 190
GDYMG HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P YI+MFVLDE
Sbjct: 124 GDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDE 183
Query: 191 ADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTL 250
ADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTL
Sbjct: 184 ADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTL 243
Query: 251 EGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATH 310
EGI+QF++NV++EEWKLDTLCDLYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA H
Sbjct: 244 EGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMH 303
Query: 311 GDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRS 370
GDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR
Sbjct: 304 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 363
Query: 371 GRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
GRFGRKGVAIN VT +D R L DI+ FYN IEE+P NVADLI
Sbjct: 364 GRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 1456 (517.6 bits), Expect = 3.8e-149, P = 3.8e-149
Identities = 285/403 (70%), Positives = 330/403 (81%)
Query: 12 DARSFDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGI 71
D+RS D+ + + EG +++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I
Sbjct: 6 DSRSRDNGPDGM-EPEGV-IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAI 63
Query: 72 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRAL 131
+P KG DVI QAQSGTGKTATF ILQQ++ + QALVLAPTRELAQQI+KV+ AL
Sbjct: 64 LPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMAL 123
Query: 132 GDYMGVKVHACVGGTSVR-EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDE 190
GDYMG HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P YI+MFVLDE
Sbjct: 124 GDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDE 183
Query: 191 ADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTL 250
ADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTL
Sbjct: 184 ADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTL 243
Query: 251 EGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATH 310
EGI+QF++NV++EEWKLDTLCDLYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA H
Sbjct: 244 EGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMH 303
Query: 311 GDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRS 370
GDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR
Sbjct: 304 GDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 363
Query: 371 GRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
GRFGRKGVAIN VT +D R L DI+ FYN IEE+P NVADLI
Sbjct: 364 GRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 1450 (515.5 bits), Expect = 1.6e-148, P = 1.6e-148
Identities = 279/381 (73%), Positives = 320/381 (83%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 26 NWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTAT 85
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVR-EDQ 152
F ILQQ++ + QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR E Q
Sbjct: 86 FAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQ 145
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
++ H++VGTPGRVFDML R+ L P YI+MFVLDEADEMLSRGFKDQIYDIFQ L
Sbjct: 146 KLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNS 205
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
QV + SATMP + LE+T+KFM P+RILVK++ELTLEGI+QF++NV++EEWKLDTLCD
Sbjct: 206 NTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCD 265
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332
LYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA HGDMDQ RD+IMREFRSGSSRV
Sbjct: 266 LYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRV 325
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLA 392
LITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN VT +D R L
Sbjct: 326 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLR 385
Query: 393 DIQRFYNVVIEELPANVADLI 413
DI+ FYN IEE+P NVADLI
Sbjct: 386 DIETFYNTSIEEMPLNVADLI 406
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 1449 (515.1 bits), Expect = 2.1e-148, P = 2.1e-148
Identities = 281/381 (73%), Positives = 318/381 (83%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
++ E+ DSFD M L+E LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 26 NWKEIVDSFDDMNLREALLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTAT 85
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQR 153
F ILQQ+D E QA+VLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR D +
Sbjct: 86 FAISILQQIDVELKATQAMVLAPTRELAQQIQKVVLALGDYMGATCHACIGGTNVRNDVQ 145
Query: 154 ILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
L A V H+VVGTPGRVFDML R+ L P YI+MF LDEADEMLSRGFKDQIY+IFQ L
Sbjct: 146 KLQADVPHIVVGTPGRVFDMLNRRYLSPKYIKMFALDEADEMLSRGFKDQIYEIFQKLAT 205
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
QV + SATMP E LE+T KFM PVRILVK++ELTLEGI+QF++NV+KEEWKLDTLCD
Sbjct: 206 DTQVILLSATMPQEVLEVTTKFMRDPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLCD 265
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332
LYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA HGDM+Q RD+IM+EFRSGSSRV
Sbjct: 266 LYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMEQKERDVIMKEFRSGSSRV 325
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLA 392
LITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN +T DD R L
Sbjct: 326 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMITEDDKRTLR 385
Query: 393 DIQRFYNVVIEELPANVADLI 413
DI+ FYN +EE+P NVADLI
Sbjct: 386 DIETFYNTTVEEMPMNVADLI 406
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 1420 (504.9 bits), Expect = 2.5e-145, P = 2.5e-145
Identities = 272/380 (71%), Positives = 316/380 (83%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+YDEV D+FD M LK LLRGIYAYGFE+PSAIQQR I+P DV+ QAQSGTGKTAT
Sbjct: 13 NYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGKTAT 72
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQR 153
F +LQ++D QCQAL+LAPTRELAQQI+KV+ ALGD M V+ HAC+GGT VR+D
Sbjct: 73 FSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDMA 132
Query: 154 ILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGK 213
L AGVHVVVGTPGRV DM++R++L D ++MFVLDEADEMLSRGFKDQIYDIFQ LP
Sbjct: 133 ALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPPT 192
Query: 214 IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDL 273
QV + SATMP + LE+T KFM P+RILVK+DELTLEGIKQF+V V+KEEWKLDTLCDL
Sbjct: 193 AQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLDTLCDL 252
Query: 274 YETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVL 333
YET+ +TQ+VIF NTRRKVDWLT+Q+ RD TVS+ HGDMDQ RD +M EFR+GSSR+L
Sbjct: 253 YETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRIL 312
Query: 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLAD 393
ITTDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGV+INFVT DD RM+ +
Sbjct: 313 ITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMRE 372
Query: 394 IQRFYNVVIEELPANVADLI 413
I++FYN IEE+P N+ADLI
Sbjct: 373 IEQFYNTHIEEMPMNIADLI 392
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 1417 (503.9 bits), Expect = 5.1e-145, P = 5.1e-145
Identities = 276/387 (71%), Positives = 320/387 (82%)
Query: 27 EGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQS 86
EGQ +YDE DSFD M LK LLRGIYAYGFE+PSAIQQR I+P KG DVI QAQS
Sbjct: 11 EGQ-IESNYDETVDSFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQS 69
Query: 87 GTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGT 146
GTGKTATF +LQ++D QCQAL+LAPTRELAQQI+KV+ A+GD+M ++ HAC+GGT
Sbjct: 70 GTGKTATFSISVLQKIDTNVKQCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGT 129
Query: 147 SVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDI 206
SVR+D + L G VVVGTPGRV DM++R+ L+ D ++MFVLDEADEMLSRGF +QIYDI
Sbjct: 130 SVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDGMKMFVLDEADEMLSRGFTEQIYDI 189
Query: 207 FQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWK 266
FQ LP QV + SATMP + LE+T KFM PVRILVK+DELTLEGIKQF++ V+KEEWK
Sbjct: 190 FQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEKEEWK 249
Query: 267 LDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFR 326
LDTL DLYET+ ITQ+VIF NTRRKVDWLTD++ +RD TVSA HGDMDQ RD+IM+EFR
Sbjct: 250 LDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFR 309
Query: 327 SGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD 386
SGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT D
Sbjct: 310 SGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAD 369
Query: 387 DDRMLADIQRFYNVVIEELPANVADLI 413
D RM+ +I++FY+ IEE+P NVADLI
Sbjct: 370 DVRMMREIEQFYSTQIEEMPMNVADLI 396
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 1410 (501.4 bits), Expect = 2.8e-144, P = 2.8e-144
Identities = 275/381 (72%), Positives = 314/381 (82%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 26 NWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTAT 85
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVR-EDQ 152
F ILQQ++ + QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR E Q
Sbjct: 86 FAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQ 145
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
++ H++VGTPGRVFDML R+ L P YI+MFVLDEADEMLSRGFKDQIYDIFQ L
Sbjct: 146 KLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNS 205
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
QV + SATMP + LE+T+KFM P+RI LTLEGI+QF++NV++EEWKLDTLCD
Sbjct: 206 NTQVVLLSATMPSDVLEVTKKFMRDPIRIX-----LTLEGIRQFYINVEREEWKLDTLCD 260
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332
LYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA HGDMDQ RD+IMREFRSGSSRV
Sbjct: 261 LYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRV 320
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLA 392
LITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN VT +D R L
Sbjct: 321 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLR 380
Query: 393 DIQRFYNVVIEELPANVADLI 413
DI+ FYN IEE+P NVADLI
Sbjct: 381 DIETFYNTSIEEMPLNVADLI 401
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 1407 (500.3 bits), Expect = 5.9e-144, P = 5.9e-144
Identities = 269/380 (70%), Positives = 319/380 (83%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
++ EVYD+FD M L+E LLRGIY YGFEKPSAIQQR I+P +G DVI QAQSGTGKTAT
Sbjct: 24 TWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTAT 83
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQR 153
F ILQQ+D +CQAL+LAPTRELA QI++V+ ALG+YM V HAC+GGT+VRED R
Sbjct: 84 FSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDAR 143
Query: 154 ILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGK 213
IL +G HVVVGTPGRV+DM+ R+ LR YI++FVLDEADEMLSRGFKDQI D+F+ LP
Sbjct: 144 ILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPD 203
Query: 214 IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDL 273
+QV + SATMPP+ LE++R FM PV ILVK++ELTLEGIKQF+VNV +E WKL TLCDL
Sbjct: 204 VQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDL 263
Query: 274 YETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVL 333
Y+TL+ITQSVIF NTRRKVD LT +M + TVSA HGDM+Q R++IM++FRSGSSRVL
Sbjct: 264 YDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVL 323
Query: 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLAD 393
ITTDLLARGIDVQQVSLVINYDLP+ ENY+HRIGR GRFGRKGVAINF+T DD R+L D
Sbjct: 324 ITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKD 383
Query: 394 IQRFYNVVIEELPANVADLI 413
I++FY+ IEE+PAN+ADLI
Sbjct: 384 IEQFYHTTIEEMPANIADLI 403
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 1391 (494.7 bits), Expect = 2.9e-142, P = 2.9e-142
Identities = 266/380 (70%), Positives = 315/380 (82%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+YDE+ DSFDSM LK LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 19 NYDEITDSFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTAT 78
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQR 153
F LQ+LD CQAL++APTRELAQQI+KV+ A+GD+M ++ HAC+GGT+VR+D
Sbjct: 79 FSISALQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTAVRDDMN 138
Query: 154 ILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGK 213
L G +VVGTPGR+ DM++R+ L+ D ++MF+LDEADEMLSRGF +QIYDIFQ LP
Sbjct: 139 ALREGPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRGFTEQIYDIFQLLPQS 198
Query: 214 IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDL 273
QV + SATMP + LE+T KFM PVRILVK+ ELTLEGIKQF++ V+KEEWKLDTL DL
Sbjct: 199 TQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKLDTLSDL 258
Query: 274 YETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVL 333
YET+ ITQ+VIF NTRRKVDWLTD++ +RD TVSA HGDM+Q RD+IM+EFRSGSSRVL
Sbjct: 259 YETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVL 318
Query: 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLAD 393
I TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +
Sbjct: 319 IATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMRE 378
Query: 394 IQRFYNVVIEELPANVADLI 413
I++FY+ IEE+P NVADLI
Sbjct: 379 IEQFYSTQIEEMPMNVADLI 398
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 1363 (484.9 bits), Expect = 2.7e-139, P = 2.7e-139
Identities = 263/397 (66%), Positives = 318/397 (80%)
Query: 17 DSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCK 76
D N+++++ +G +YD+V +SFD M LKE LLRGIY +GFEKPSAIQ+R IVP
Sbjct: 7 DVNVSSVVDADGL-IEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTT 65
Query: 77 GLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG 136
G DVI QAQSGTGKTATF ILQ++D+E QALV+APTRELAQQI+KVM ALG+Y+
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 137 VKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLS 196
V + C+GGTSVR+DQR L AG+HVVVGTPGRV DM+ R +L I+MFVLDEADEMLS
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLS 185
Query: 197 RGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF 256
RGFKDQIY++F+ +P +QV + SATMP E L++T +FM P+RILVK+DELTLEGI+QF
Sbjct: 186 RGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQF 245
Query: 257 HVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQN 316
++NV K+EWK D LCDLY + +TQ+VIF NTRRKVD LT++M TVS HGDMDQ
Sbjct: 246 YINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQA 305
Query: 317 SRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRK 376
RD IMREFRSGSSRVLITTD+LARGIDVQQVSLVINYDLP+ ENY+HRIGRSGRFGRK
Sbjct: 306 ERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRK 365
Query: 377 GVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
GVAINFVT +D R L +I+ +Y IEE+P ++ADLI
Sbjct: 366 GVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 402
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 1333 (474.3 bits), Expect = 4.1e-136, P = 4.1e-136
Identities = 259/380 (68%), Positives = 307/380 (80%)
Query: 36 DEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 95
+E+ D+FD++GL E LLRGIY+YGFEKPSAIQQRGI P G D I QAQSGTGKTATF
Sbjct: 19 EEIVDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTGKTATFV 78
Query: 96 SGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL 155
LQ ++Y+ + CQAL+LAPTRELAQQI+KV+ ALGDY+ VK HACVGGT VRED L
Sbjct: 79 ISSLQLINYDYVACQALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTVVREDIDKL 138
Query: 156 SAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQ 215
GVH+VVGTPGRV+DM+ ++ L D +++F+LDEADEMLSRGFK QIY++F+ L IQ
Sbjct: 139 KQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFKKLVPDIQ 198
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYE 275
V +FSATMP E LE+T +FM P ILVK+DELTLEGI+QF+V V+KEEWKLDTLCDLYE
Sbjct: 199 VALFSATMPQEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEWKLDTLCDLYE 258
Query: 276 TLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335
TL ITQS+I+ NTR+KVD LT +M +R TVS HGDMDQ RD+IMREFRSGS+RVL+T
Sbjct: 259 TLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVT 318
Query: 336 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRM--LAD 393
TDLLARGIDVQQVSLVINYDLP P+ Y+HRIGRSGRFGRKGVAINFVT DD L
Sbjct: 319 TDLLARGIDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLKK 378
Query: 394 IQRFYNVVIEELPANVADLI 413
I+ +Y+ IEE+P VAD +
Sbjct: 379 IESYYSTQIEEMPLEVADYL 398
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 1333 (474.3 bits), Expect = 4.1e-136, P = 4.1e-136
Identities = 259/380 (68%), Positives = 307/380 (80%)
Query: 36 DEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 95
+E+ D+FD++GL E LLRGIY+YGFEKPSAIQQRGI P G D I QAQSGTGKTATF
Sbjct: 19 EEIVDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTGKTATFV 78
Query: 96 SGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL 155
LQ ++Y+ + CQAL+LAPTRELAQQI+KV+ ALGDY+ VK HACVGGT VRED L
Sbjct: 79 ISSLQLINYDYVACQALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTVVREDIDKL 138
Query: 156 SAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQ 215
GVH+VVGTPGRV+DM+ ++ L D +++F+LDEADEMLSRGFK QIY++F+ L IQ
Sbjct: 139 KQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFKKLVPDIQ 198
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYE 275
V +FSATMP E LE+T +FM P ILVK+DELTLEGI+QF+V V+KEEWKLDTLCDLYE
Sbjct: 199 VALFSATMPQEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEWKLDTLCDLYE 258
Query: 276 TLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335
TL ITQS+I+ NTR+KVD LT +M +R TVS HGDMDQ RD+IMREFRSGS+RVL+T
Sbjct: 259 TLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVT 318
Query: 336 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRM--LAD 393
TDLLARGIDVQQVSLVINYDLP P+ Y+HRIGRSGRFGRKGVAINFVT DD L
Sbjct: 319 TDLLARGIDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLKK 378
Query: 394 IQRFYNVVIEELPANVADLI 413
I+ +Y+ IEE+P VAD +
Sbjct: 379 IESYYSTQIEEMPLEVADYL 398
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 1333 (474.3 bits), Expect = 4.1e-136, P = 4.1e-136
Identities = 261/395 (66%), Positives = 318/395 (80%)
Query: 23 LLSEEGQ---DFFVSYD-EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGL 78
+L EE +F S + +V +FD+MGL+E+LLRGIYAYGFEKPSAIQQR I KG
Sbjct: 12 ILKEEDMTKIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGR 71
Query: 79 DVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVK 138
DVI Q+QSGTGKTATFC +LQ LD + + QAL+LAPTRELA QI+KV+ ALGDYM V+
Sbjct: 72 DVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQ 131
Query: 139 VHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG 198
HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I+M VLDEADEML++G
Sbjct: 132 CHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKG 191
Query: 199 FKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHV 258
FK+QIYD++++LP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V
Sbjct: 192 FKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFV 251
Query: 259 NVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSR 318
V++EEWK DTLCDLY+TL ITQ+VIF NT+RKVDWLT++MR + TVS+ HGDM Q R
Sbjct: 252 AVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKER 311
Query: 319 DIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGV 378
+ IM+EFRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+GRKGV
Sbjct: 312 ESIMKEFRSGASRVLISTDVWARGLDVSQVSLIINYDLPNNRELYIHRIGRSGRYGRKGV 371
Query: 379 AINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
AINFV DD R+L DI+++Y+ I+E+P NVADLI
Sbjct: 372 AINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 406
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 1318 (469.0 bits), Expect = 1.6e-134, P = 1.6e-134
Identities = 261/400 (65%), Positives = 317/400 (79%)
Query: 18 SNMNNLLSEEGQ---DFFVSYD-EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVP 73
S LL EE +F S + +V +FD+MGL+E+LLRGIYAYGFEKPSAIQQR I
Sbjct: 12 SARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQ 71
Query: 74 FCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD 133
KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA QI+K + ALGD
Sbjct: 72 IIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGD 131
Query: 134 YMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADE 193
YM V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I+M VLDEADE
Sbjct: 132 YMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADE 191
Query: 194 MLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGI 253
ML++GFK+QIYD++++LP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGI
Sbjct: 192 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGI 251
Query: 254 KQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDM 313
KQF V V++EEWK DTLCDLY+TL ITQ+VIF NT+RKVDWLT++MR + TVS+ HGDM
Sbjct: 252 KQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDM 311
Query: 314 DQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRF 373
Q R+ IM+EFRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+
Sbjct: 312 PQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRY 371
Query: 374 GRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
GRKGVAINFV DD R+L DI+++Y+ I+E+P NVADLI
Sbjct: 372 GRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 1318 (469.0 bits), Expect = 1.6e-134, P = 1.6e-134
Identities = 261/400 (65%), Positives = 317/400 (79%)
Query: 18 SNMNNLLSEEGQ---DFFVSYD-EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVP 73
S LL EE +F S + +V +FD+MGL+E+LLRGIYAYGFEKPSAIQQR I
Sbjct: 12 SARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQ 71
Query: 74 FCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD 133
KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA QI+K + ALGD
Sbjct: 72 IIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGD 131
Query: 134 YMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADE 193
YM V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I+M VLDEADE
Sbjct: 132 YMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADE 191
Query: 194 MLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGI 253
ML++GFK+QIYD++++LP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGI
Sbjct: 192 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGI 251
Query: 254 KQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDM 313
KQF V V++EEWK DTLCDLY+TL ITQ+VIF NT+RKVDWLT++MR + TVS+ HGDM
Sbjct: 252 KQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDM 311
Query: 314 DQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRF 373
Q R+ IM+EFRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+
Sbjct: 312 PQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRY 371
Query: 374 GRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
GRKGVAINFV DD R+L DI+++Y+ I+E+P NVADLI
Sbjct: 372 GRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 1318 (469.0 bits), Expect = 1.6e-134, P = 1.6e-134
Identities = 261/400 (65%), Positives = 317/400 (79%)
Query: 18 SNMNNLLSEEGQ---DFFVSYD-EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVP 73
S LL EE +F S + +V +FD+MGL+E+LLRGIYAYGFEKPSAIQQR I
Sbjct: 12 SARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQ 71
Query: 74 FCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD 133
KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA QI+K + ALGD
Sbjct: 72 IIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGD 131
Query: 134 YMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADE 193
YM V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I+M VLDEADE
Sbjct: 132 YMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADE 191
Query: 194 MLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGI 253
ML++GFK+QIYD++++LP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGI
Sbjct: 192 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGI 251
Query: 254 KQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDM 313
KQF V V++EEWK DTLCDLY+TL ITQ+VIF NT+RKVDWLT++MR + TVS+ HGDM
Sbjct: 252 KQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDM 311
Query: 314 DQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRF 373
Q R+ IM+EFRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+
Sbjct: 312 PQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRY 371
Query: 374 GRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
GRKGVAINFV DD R+L DI+++Y+ I+E+P NVADLI
Sbjct: 372 GRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 1318 (469.0 bits), Expect = 1.6e-134, P = 1.6e-134
Identities = 261/400 (65%), Positives = 317/400 (79%)
Query: 18 SNMNNLLSEEGQ---DFFVSYD-EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVP 73
S LL EE +F S + +V +FD+MGL+E+LLRGIYAYGFEKPSAIQQR I
Sbjct: 12 SARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQ 71
Query: 74 FCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD 133
KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA QI+K + ALGD
Sbjct: 72 IIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGD 131
Query: 134 YMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADE 193
YM V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I+M VLDEADE
Sbjct: 132 YMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADE 191
Query: 194 MLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGI 253
ML++GFK+QIYD++++LP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGI
Sbjct: 192 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGI 251
Query: 254 KQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDM 313
KQF V V++EEWK DTLCDLY+TL ITQ+VIF NT+RKVDWLT++MR + TVS+ HGDM
Sbjct: 252 KQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDM 311
Query: 314 DQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRF 373
Q R+ IM+EFRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+
Sbjct: 312 PQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRY 371
Query: 374 GRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
GRKGVAINFV DD R+L DI+++Y+ I+E+P NVADLI
Sbjct: 372 GRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 1318 (469.0 bits), Expect = 1.6e-134, P = 1.6e-134
Identities = 261/400 (65%), Positives = 317/400 (79%)
Query: 18 SNMNNLLSEEGQ---DFFVSYD-EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVP 73
S LL EE +F S + +V +FD+MGL+E+LLRGIYAYGFEKPSAIQQR I
Sbjct: 12 SARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQ 71
Query: 74 FCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD 133
KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA QI+K + ALGD
Sbjct: 72 IIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGD 131
Query: 134 YMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADE 193
YM V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I+M VLDEADE
Sbjct: 132 YMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADE 191
Query: 194 MLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGI 253
ML++GFK+QIYD++++LP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGI
Sbjct: 192 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGI 251
Query: 254 KQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDM 313
KQF V V++EEWK DTLCDLY+TL ITQ+VIF NT+RKVDWLT++MR + TVS+ HGDM
Sbjct: 252 KQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDM 311
Query: 314 DQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRF 373
Q R+ IM+EFRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+
Sbjct: 312 PQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRY 371
Query: 374 GRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
GRKGVAINFV DD R+L DI+++Y+ I+E+P NVADLI
Sbjct: 372 GRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 1317 (468.7 bits), Expect = 2.0e-134, P = 2.0e-134
Identities = 261/410 (63%), Positives = 320/410 (78%)
Query: 8 GSGFDARSFDSNMNNLLSEEGQ---DFFVSYD-EVYDSFDSMGLKENLLRGIYAYGFEKP 63
GS + S ++ EE +F S + +V +FD+MGL+E+LLRGIYAYGFEKP
Sbjct: 3 GSAGSGGTTGSARKRIMKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKP 62
Query: 64 SAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQ 123
SAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA Q
Sbjct: 63 SAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQ 122
Query: 124 IEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYI 183
I+K + ALGDYM V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I
Sbjct: 123 IQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAI 182
Query: 184 RMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILV 243
+M VLDEADEML++GFK+QIYD++++LP QV + SAT+P E LE+T KFM P+RILV
Sbjct: 183 KMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILV 242
Query: 244 KRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRD 303
KRDELTLEGIKQF V V++EEWK DTLCDLY+TL ITQ+VIF NT+RKVDWLT++MR +
Sbjct: 243 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN 302
Query: 304 HTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENY 363
TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y
Sbjct: 303 FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY 362
Query: 364 LHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+ I+E+P NVADLI
Sbjct: 363 IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 412
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 1316 (468.3 bits), Expect = 2.6e-134, P = 2.6e-134
Identities = 254/348 (72%), Positives = 291/348 (83%)
Query: 67 QQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEK 126
+QR I+P KG DVI QAQSGTGKTATF ILQQ++ + QALVLAPTRELAQQI+K
Sbjct: 76 RQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQK 135
Query: 127 VMRALGDYMGVKVHACVGGTSVR-EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRM 185
V+ ALGDYMG HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P YI+M
Sbjct: 136 VVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKM 195
Query: 186 FVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKR 245
FVLDEADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK+
Sbjct: 196 FVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKK 255
Query: 246 DELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHT 305
+ELTLEGI+QF++NV++EEWKLDTLCDLYETL ITQ+VIF+NTRRKVDWLT++M +RD T
Sbjct: 256 EELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFT 315
Query: 306 VSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLH 365
VSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+H
Sbjct: 316 VSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH 375
Query: 366 RIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
RIGR GRFGRKGVAIN VT +D R L DI+ FYN IEE+P NVADLI
Sbjct: 376 RIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 423
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 1307 (465.1 bits), Expect = 2.3e-133, P = 2.3e-133
Identities = 258/385 (67%), Positives = 306/385 (79%)
Query: 30 DFFVSYD-EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 88
+F S D EV +F++M LKE LLRGIYAYGFEKPSAIQQR I P KG DVI QAQSGT
Sbjct: 15 EFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGT 74
Query: 89 GKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSV 148
GKTATF ILQ LD + Q L L+PTRELA QI+KV+ ALGD M V+ H C+GGT++
Sbjct: 75 GKTATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILALGDMMNVQCHVCIGGTNL 134
Query: 149 REDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQ 208
ED R L G H+V GTPGRVFDM++R+ LR I+M VLDEADEML++GFK+QIYD+++
Sbjct: 135 GEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 194
Query: 209 HLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLD 268
+LP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V V++EEWK D
Sbjct: 195 YLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 254
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
TLCDLY+TL ITQ+VIF NT+RKVDWLT++MR + TVS+ HGDM Q RD IM+EFR+G
Sbjct: 255 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAG 314
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
SRVLITTD+ ARGIDVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD
Sbjct: 315 QSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 374
Query: 389 RMLADIQRFYNVVIEELPANVADLI 413
R+L DI+++Y+ I+E+P NVADLI
Sbjct: 375 RILRDIEQYYSTQIDEMPVNVADLI 399
>ASPGD|ASPL0000014018 [details] [associations]
symbol:fal1 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
Length = 399
Score = 1299 (462.3 bits), Expect = 1.6e-132, P = 1.6e-132
Identities = 252/390 (64%), Positives = 310/390 (79%)
Query: 25 SEEGQDFFVSYD-EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQ 83
+++ +F S + V +F+ M LKE+LLRGIYAYG+E PSA+Q R IV CKG D I Q
Sbjct: 9 ADDKMEFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQ 68
Query: 84 AQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACV 143
AQSGTGKTATF LQ +D + QALVL+PTRELA QI+ V+ ALGDYM V+ HAC+
Sbjct: 69 AQSGTGKTATFSISALQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACI 128
Query: 144 GGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQI 203
GGT++ ED R L G HVV GTPGRV DM+RR+ LR +I+M VLDEADE+L+RGF++QI
Sbjct: 129 GGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQI 188
Query: 204 YDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKE 263
YD++++LP QV V SAT+P + L++T KFM PVR+LVKRDELTLEGIKQ+ + V+KE
Sbjct: 189 YDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKE 248
Query: 264 EWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMR 323
EWK DTLCDLY+TL ITQ+VIF NTRRKVDWLTD+MR + TVS+ HG+M Q RD IM+
Sbjct: 249 EWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQ 308
Query: 324 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 383
+FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLPT ENY+HRIGRSGRFGRKGVAINFV
Sbjct: 309 DFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFV 368
Query: 384 TRDDDRMLADIQRFYNVVIEELPANVADLI 413
T DD R+L DI+ +Y+ I+E+P NVADL+
Sbjct: 369 TSDDVRILRDIELYYSTQIDEMPMNVADLL 398
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 1298 (462.0 bits), Expect = 2.1e-132, P = 2.1e-132
Identities = 252/384 (65%), Positives = 311/384 (80%)
Query: 32 FVSYDEV--YDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTG 89
F S +EV +FD MGL+E+LLRGIYAYGFEKPSAIQQR I K DVI QAQSGTG
Sbjct: 16 FESSEEVSIIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTG 75
Query: 90 KTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVR 149
KTATF +LQ LD + + QAL+L+PTRELA QI+KV+ ALGDYM V+ HAC+GGT++
Sbjct: 76 KTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLG 135
Query: 150 EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQH 209
ED R L G HVV GTPGRVFDM+RR++LR I++ VLDEADEML++GFK+Q+YDI+++
Sbjct: 136 EDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRY 195
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDT 269
LP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V VD+EEWK DT
Sbjct: 196 LPPGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDT 255
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGS 329
L DLY+TL ITQ+V+F NTRRKVDWLTD+M+ + TVS+ HGDM+Q RD +M+EFR+G+
Sbjct: 256 LIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGT 315
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDR 389
+RVLI+TD+ ARG+DV QVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV +DD R
Sbjct: 316 TRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVR 375
Query: 390 MLADIQRFYNVVIEELPANVADLI 413
+L DI+++Y+ I+E+P N+AD+I
Sbjct: 376 ILRDIEQYYSTQIDEMPMNIADII 399
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 1297 (461.6 bits), Expect = 2.7e-132, P = 2.7e-132
Identities = 251/384 (65%), Positives = 311/384 (80%)
Query: 32 FVSYDEV--YDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTG 89
F S +EV +FD MGL+E+LLRGIYAYGFEKPSAIQQR + K DVI QAQSGTG
Sbjct: 16 FESSEEVNVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTG 75
Query: 90 KTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVR 149
KTATF +LQ LD + + QAL+L+PTRELA QI+KV+ ALGDYM V+ HAC+GGT++
Sbjct: 76 KTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLG 135
Query: 150 EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQH 209
ED R L G HVV GTPGRVFDM+RR++LR I++ VLDEADEML++GFK+Q+YDI+++
Sbjct: 136 EDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRY 195
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDT 269
LP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V VD+EEWK DT
Sbjct: 196 LPPGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDT 255
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGS 329
L DLY+TL ITQ+V+F NTRRKVDWLTD+M+ + TVS+ HGDM+Q RD +M+EFR+G+
Sbjct: 256 LIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGT 315
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDR 389
+RVLI+TD+ ARG+DV QVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV +DD R
Sbjct: 316 TRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVR 375
Query: 390 MLADIQRFYNVVIEELPANVADLI 413
+L DI+++Y+ I+E+P N+AD+I
Sbjct: 376 ILRDIEQYYSTQIDEMPMNIADII 399
>DICTYBASE|DDB_G0269146 [details] [associations]
symbol:ifdA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269146
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K03257 OMA:AVINYHI EMBL:U78759
RefSeq:XP_645917.1 ProteinModelPortal:P90529 STRING:P90529
PRIDE:P90529 EnsemblProtists:DDB0191262 GeneID:8616858
KEGG:ddi:DDB_G0269146 InParanoid:P90529 Uniprot:P90529
Length = 395
Score = 1293 (460.2 bits), Expect = 7.1e-132, P = 7.1e-132
Identities = 254/396 (64%), Positives = 313/396 (79%)
Query: 18 SNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG 77
SN ++ L + +F +YD++ DSFD+M L ++LLRGIY+YGFEKPSAIQQR I+P KG
Sbjct: 4 SNKDDQLMKN--EFESTYDKIVDSFDNMELPKDLLRGIYSYGFEKPSAIQQRAIIPLSKG 61
Query: 78 LDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGV 137
D+I QAQSGTGKTATF GIL ++D L+CQAL++APTRELAQQI+KV+ ALG+Y+ +
Sbjct: 62 FDIIAQAQSGTGKTATFTVGILSRIDISVLKCQALIIAPTRELAQQIQKVVLALGEYLHI 121
Query: 138 KVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR 197
K +AC+GGT + +D + L +GVHVVVGTPGRVF+ML R + D IR+F LDEADEMLSR
Sbjct: 122 KSYACIGGTKITDDIQALQSGVHVVVGTPGRVFEMLSRGIINRDTIRIFCLDEADEMLSR 181
Query: 198 GFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFH 257
GFKDQIY+IF+ LP IQVG+FSATM E L IT KFM PV ILVK+DELTLEGI+QF+
Sbjct: 182 GFKDQIYEIFRFLPKTIQVGLFSATMTDETLGITSKFMQNPVSILVKKDELTLEGIRQFY 241
Query: 258 VNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNS 317
VNV E+ K + L DLYETL+ITQSVIF NTRRKVDWLT +M + TVS+THGD Q
Sbjct: 242 VNVGVEQGKFEVLTDLYETLSITQSVIFCNTRRKVDWLTSKMTEQKFTVSSTHGD--QKD 299
Query: 318 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKG 377
RD I++ FRSG++RVLITTDLLARGIDVQQVSLVIN+DLPT ENY+HRIGRSGRFGRKG
Sbjct: 300 RDGILQAFRSGATRVLITTDLLARGIDVQQVSLVINFDLPTNIENYIHRIGRSGRFGRKG 359
Query: 378 VAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
VAINF+T + + ++ R YN I E+P ++ +
Sbjct: 360 VAINFITDAERGQIDELSRHYNTYIAEMPQDIGSFL 395
>UNIPROTKB|E7EQG2 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC112907 HGNC:HGNC:3284 ChiTaRS:EIF4A2
IPI:IPI00924536 ProteinModelPortal:E7EQG2 SMR:E7EQG2 PRIDE:E7EQG2
Ensembl:ENST00000425053 ArrayExpress:E7EQG2 Bgee:E7EQG2
Uniprot:E7EQG2
Length = 362
Score = 1285 (457.4 bits), Expect = 5.0e-131, P = 5.0e-131
Identities = 247/334 (73%), Positives = 287/334 (85%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+++E+ D+FD M LKE+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 27 NWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTAT 86
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVRED-Q 152
F ILQQL+ E + QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR + Q
Sbjct: 87 FAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 146
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
++ + H+VVGTPGRVFDML R+ L P +I+MFVLDEADEMLSRGFKDQIY+IFQ L
Sbjct: 147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNT 206
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++NV++EEWKLDTLCD
Sbjct: 207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332
LYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA HGDMDQ RD+IMREFRSGSSRV
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHR 366
LITTDLLARGIDVQQVSLVINYDLPT ENY+HR
Sbjct: 327 LITTDLLARGIDVQQVSLVINYDLPTNRENYIHR 360
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 1285 (457.4 bits), Expect = 5.0e-131, P = 5.0e-131
Identities = 245/388 (63%), Positives = 305/388 (78%)
Query: 27 EGQDFFVSYD-EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 85
E + S D SF+ M LKE+LLRGIYAYG+E PSA+Q R I+ CKG DVI QAQ
Sbjct: 7 ENVELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQ 66
Query: 86 SGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGG 145
SGTGKTATF GILQ +D QAL+L+PTRELA QI+ V+ ALGD+M V+ HAC+GG
Sbjct: 67 SGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGG 126
Query: 146 TSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYD 205
TSV D + L G HVV GTPGRV DM+RR++LR ++M +LDEADE+L++GFK+QIYD
Sbjct: 127 TSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYD 186
Query: 206 IFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEW 265
I+++LP QV V SAT+P + LE+T KF PVRILVKRDELTLEG+KQ+ + V+KEEW
Sbjct: 187 IYRYLPPGTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAVEKEEW 246
Query: 266 KLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREF 325
K DTLCDLY+TL ITQ+VIF N+RRKVDWLT++MR + TV++ HG+M Q RD IM++F
Sbjct: 247 KFDTLCDLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDF 306
Query: 326 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR 385
R G+SRVLI TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINFVT
Sbjct: 307 RQGNSRVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTN 366
Query: 386 DDDRMLADIQRFYNVVIEELPANVADLI 413
+D R+L DI+++Y+ VI+E+P N+ D++
Sbjct: 367 EDVRILRDIEQYYSTVIDEMPMNIGDMV 394
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 1273 (453.2 bits), Expect = 9.3e-130, P = 9.3e-130
Identities = 245/377 (64%), Positives = 303/377 (80%)
Query: 37 EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 96
E SF+ MG+KE++LRG+Y YGFEKPSAIQQR ++P +G DVI QAQSGTGKT+
Sbjct: 32 EPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIAL 91
Query: 97 GILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILS 156
+ Q +D S + QAL+L+PTRELA Q EK ++A+G + ++ HAC+GG SV ED R L
Sbjct: 92 SVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLE 151
Query: 157 AGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQV 216
GVHVV GTPGRV DM++R+SLR I++ +LDE+DEMLSRGFKDQIYD++++LP +QV
Sbjct: 152 HGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQV 211
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYET 276
+ SAT+P E LE+T KFM +PV+ILVKRDELTLEGIKQF V V+KEEWK DTLCDLY+T
Sbjct: 212 CLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDT 271
Query: 277 LAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITT 336
L ITQ+VIF NT+RKVD+L+++MRS + TVS+ HGDM Q RD IM EFRSG SRVLITT
Sbjct: 272 LTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITT 331
Query: 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQR 396
D+ ARGIDVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD ++L DI++
Sbjct: 332 DVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQ 391
Query: 397 FYNVVIEELPANVADLI 413
+Y+ I+E+P NVADLI
Sbjct: 392 YYSTQIDEMPMNVADLI 408
>UNIPROTKB|F1RZ83 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
Uniprot:F1RZ83
Length = 411
Score = 1264 (450.0 bits), Expect = 8.4e-129, P = 8.4e-129
Identities = 251/400 (62%), Positives = 311/400 (77%)
Query: 18 SNMNNLLSEEGQ---DFFVSYD-EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVP 73
S LL EE +F S + +V +FD+MGL+E+LLRGIYAYG +P A QQR I+
Sbjct: 12 SARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGRPEPGAFQQRKILV 71
Query: 74 FCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD 133
K + + +QSGTGKTATF +LQ LD + + QAL+LAPTRELA QI+K + ALGD
Sbjct: 72 VMKSNNAVVISQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGD 131
Query: 134 YMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADE 193
YM V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I+M VLDEADE
Sbjct: 132 YMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADE 191
Query: 194 MLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGI 253
ML++GFK+QIYD++++LP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGI
Sbjct: 192 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGI 251
Query: 254 KQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDM 313
KQF V V++EEWK DTLCDLY+TL ITQ+VIF NT+RKVDWLT++MR + TVS+ HGDM
Sbjct: 252 KQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDM 311
Query: 314 DQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRF 373
Q R+ IM+EFRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+
Sbjct: 312 PQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRY 371
Query: 374 GRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
GRKGVAINFV DD R+L DI+++Y+ I+E+P NVADLI
Sbjct: 372 GRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 1220 (434.5 bits), Expect = 3.9e-124, P = 3.9e-124
Identities = 239/402 (59%), Positives = 305/402 (75%)
Query: 12 DARSFDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGI 71
D R SN + + + F S EV +F+SMGL+E LLRGI+ YGFEKPSAIQQR I
Sbjct: 5 DRRGNSSNDGSSF-KLNETFTSSEVEVKPTFESMGLREELLRGIFNYGFEKPSAIQQRAI 63
Query: 72 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRAL 131
+P KG D I QAQSGTGKTATF G LQ ++ Q L+L+PTRELAQQI+KV AL
Sbjct: 64 LPIIKGRDTIAQAQSGTGKTATFSIGALQCVEVNVRSPQVLILSPTRELAQQIQKVALAL 123
Query: 132 GDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEA 191
++M ++VHACVGG ++ +D + L GVH+V GTPGRV DM+ R+SL +I+M +LDEA
Sbjct: 124 SEFMNIQVHACVGGKNLSDDVKKLETGVHIVSGTPGRVLDMITRKSLPTRHIKMMILDEA 183
Query: 192 DEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE 251
DEMLS GF+ QI D++++LP Q+ + SAT+ + + +T KFM KPVRIL+KRDELTL+
Sbjct: 184 DEMLSLGFQQQINDVYRYLPNGTQIVLVSATLTQDVVSMTEKFMTKPVRILLKRDELTLD 243
Query: 252 GIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHG 311
GIKQF V+V+KE+WK TLCD+Y++L ITQ+VIF NT++KVD LT+QMR + TV++ HG
Sbjct: 244 GIKQFFVSVEKEDWKFGTLCDIYDSLTITQAVIFCNTKKKVDQLTEQMRDANFTVASMHG 303
Query: 312 DMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSG 371
DM Q R+ I++ FRSG +RVLITTD+LARGIDVQQVSLVINYDLP ENY+HRIGRSG
Sbjct: 304 DMVQKEREEIIKSFRSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENYIHRIGRSG 363
Query: 372 RFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
RFGRKGVAINFV D R+L DI++FY+ I+E+P N A +I
Sbjct: 364 RFGRKGVAINFVKNSDIRILRDIEQFYSTQIDEMPVNFASII 405
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 1214 (432.4 bits), Expect = 1.7e-123, P = 1.7e-123
Identities = 231/379 (60%), Positives = 297/379 (78%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+YD V FD + LK N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTAT
Sbjct: 17 NYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTAT 76
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQR 153
F LQ+++ QAL+LAPTRELA QI+ V+ A+G Y+ V VHA +GGTS+ +D
Sbjct: 77 FTISALQRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDIE 136
Query: 154 ILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGK 213
+GV +VVGTPGRV DM+ R+ + D ++MF+LDEADEMLS GFK+QIY+IF+ LP
Sbjct: 137 AFRSGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPET 196
Query: 214 IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDL 273
Q+ + SATMP + LE+T KFMN PVRILVK+DELTLEGIKQF++NV+ E++K D LCDL
Sbjct: 197 TQIVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDL 256
Query: 274 YETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVL 333
Y+++++TQ+VIF NTR KV++LT+++R + TVSA H D+ Q RD IM+EFRSGSSR+L
Sbjct: 257 YDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRIL 316
Query: 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLAD 393
I+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT D M+ +
Sbjct: 317 ISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRDVGMMRE 376
Query: 394 IQRFYNVVIEELPANVADL 412
I++FY+ IEE+PA++ L
Sbjct: 377 IEKFYSTQIEEMPADIGAL 395
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 1214 (432.4 bits), Expect = 1.7e-123, P = 1.7e-123
Identities = 231/379 (60%), Positives = 297/379 (78%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+YD V FD + LK N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTAT
Sbjct: 17 NYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTAT 76
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQR 153
F LQ+++ QAL+LAPTRELA QI+ V+ A+G Y+ V VHA +GGTS+ +D
Sbjct: 77 FTISALQRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDIE 136
Query: 154 ILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGK 213
+GV +VVGTPGRV DM+ R+ + D ++MF+LDEADEMLS GFK+QIY+IF+ LP
Sbjct: 137 AFRSGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPET 196
Query: 214 IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDL 273
Q+ + SATMP + LE+T KFMN PVRILVK+DELTLEGIKQF++NV+ E++K D LCDL
Sbjct: 197 TQIVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDL 256
Query: 274 YETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVL 333
Y+++++TQ+VIF NTR KV++LT+++R + TVSA H D+ Q RD IM+EFRSGSSR+L
Sbjct: 257 YDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRIL 316
Query: 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLAD 393
I+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT D M+ +
Sbjct: 317 ISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRDVGMMRE 376
Query: 394 IQRFYNVVIEELPANVADL 412
I++FY+ IEE+PA++ L
Sbjct: 377 IEKFYSTQIEEMPADIGAL 395
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 1206 (429.6 bits), Expect = 1.2e-122, P = 1.2e-122
Identities = 240/388 (61%), Positives = 299/388 (77%)
Query: 26 EEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 85
EE Q +YD+V FD M L ENLLRG++ YGFE+PSAIQQR I+P +G DV+ QAQ
Sbjct: 9 EESQ-IQTNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQ 67
Query: 86 SGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGG 145
SGTGKT TF LQ++D QAL+LAPTRELA QI+KV+ AL +M +KVHAC+GG
Sbjct: 68 SGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGG 127
Query: 146 TSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYD 205
TS ED L +VVGTPGRVFD ++R+ R D I+MF+LDEADEMLS GFK+QIY
Sbjct: 128 TSFVEDAEGLR-DAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQ 186
Query: 206 IFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEW 265
IF LP QV + SATMP + LE+T KFM PVRILVK+DELTLEGIKQF+VNV++EE+
Sbjct: 187 IFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEY 246
Query: 266 KLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREF 325
K + L DLY+++++TQ+VIF NTRRKV+ LT ++R+ TVSA + D+ Q RD IM+EF
Sbjct: 247 KYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEF 306
Query: 326 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR 385
RSGSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT
Sbjct: 307 RSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTN 366
Query: 386 DDDRMLADIQRFYNVVIEELPANVADLI 413
+D + ++++FY+ IEELP+++A L+
Sbjct: 367 EDVGAMRELEKFYSTQIEELPSDIATLL 394
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 1206 (429.6 bits), Expect = 1.2e-122, P = 1.2e-122
Identities = 240/388 (61%), Positives = 299/388 (77%)
Query: 26 EEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 85
EE Q +YD+V FD M L ENLLRG++ YGFE+PSAIQQR I+P +G DV+ QAQ
Sbjct: 9 EESQ-IQTNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQ 67
Query: 86 SGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGG 145
SGTGKT TF LQ++D QAL+LAPTRELA QI+KV+ AL +M +KVHAC+GG
Sbjct: 68 SGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGG 127
Query: 146 TSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYD 205
TS ED L +VVGTPGRVFD ++R+ R D I+MF+LDEADEMLS GFK+QIY
Sbjct: 128 TSFVEDAEGLR-DAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQ 186
Query: 206 IFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEW 265
IF LP QV + SATMP + LE+T KFM PVRILVK+DELTLEGIKQF+VNV++EE+
Sbjct: 187 IFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEY 246
Query: 266 KLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREF 325
K + L DLY+++++TQ+VIF NTRRKV+ LT ++R+ TVSA + D+ Q RD IM+EF
Sbjct: 247 KYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEF 306
Query: 326 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR 385
RSGSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT
Sbjct: 307 RSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTN 366
Query: 386 DDDRMLADIQRFYNVVIEELPANVADLI 413
+D + ++++FY+ IEELP+++A L+
Sbjct: 367 EDVGAMRELEKFYSTQIEELPSDIATLL 394
>CGD|CAL0001638 [details] [associations]
symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
Length = 399
Score = 1202 (428.2 bits), Expect = 3.1e-122, P = 3.1e-122
Identities = 226/398 (56%), Positives = 304/398 (76%)
Query: 16 FDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFC 75
FD +++N L + +V+ +F+SM LK +LL+GIYAYGFE PSAIQ R I+
Sbjct: 4 FDRDLDNELEFSHKS--TKGIKVHRTFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQII 61
Query: 76 KGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM 135
G D I QAQSGTGKTATF G+L+ +D +S +CQAL+L+PTRELA QI+ V++ LGDYM
Sbjct: 62 SGRDTIAQAQSGTGKTATFSIGMLEVIDTKSKECQALILSPTRELAIQIQNVVKHLGDYM 121
Query: 136 GVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEML 195
+ HAC+GG +V ED + L G +V GTPGRV D+++R++L+ I++ +LDEADE+
Sbjct: 122 NIHTHACIGGKNVGEDVKKLQQGQQIVSGTPGRVIDVIKRRNLQTRNIKVLILDEADELF 181
Query: 196 SRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ 255
++GFK+QIY+I++HLP +QV V SAT+P E LE+T KF PV+ILVKRDE++L GIKQ
Sbjct: 182 TKGFKEQIYEIYKHLPPSVQVVVVSATLPREVLEMTSKFTTDPVKILVKRDEISLSGIKQ 241
Query: 256 FHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQ 315
++V ++E+WK DTLCDLY+ L ITQ+VIF NT+ KV+WL DQM+ ++ TV A HGDM Q
Sbjct: 242 YYVQCEREDWKFDTLCDLYDNLTITQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQ 301
Query: 316 NSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGR 375
+ RD IM +FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLPT ENY+HRIGRSGRFGR
Sbjct: 302 DERDSIMNDFRRGNSRVLISTDVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGR 361
Query: 376 KGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
KG AIN +T+DD L + +++Y+ I+E+P N+ D++
Sbjct: 362 KGTAINLITKDDVVTLKEFEKYYSTKIKEMPMNINDIM 399
>UNIPROTKB|J3KT12 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1
ProteinModelPortal:J3KT12 Ensembl:ENST00000582746 Uniprot:J3KT12
Length = 341
Score = 1161 (413.8 bits), Expect = 6.9e-118, P = 6.9e-118
Identities = 228/331 (68%), Positives = 269/331 (81%)
Query: 12 DARSFDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGI 71
D+RS D+ + + EG +++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I
Sbjct: 6 DSRSRDNGPDGM-EPEGV-IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAI 63
Query: 72 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRAL 131
+P KG DVI QAQSGTGKTATF ILQQ++ + QALVLAPTRELAQQI+KV+ AL
Sbjct: 64 LPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMAL 123
Query: 132 GDYMGVKVHACVGGTSVR-EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDE 190
GDYMG HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P YI+MFVLDE
Sbjct: 124 GDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDE 183
Query: 191 ADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTL 250
ADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTL
Sbjct: 184 ADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTL 243
Query: 251 EGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATH 310
EGI+QF++NV++EEWKLDTLCDLYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA H
Sbjct: 244 EGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMH 303
Query: 311 GDMDQNSRDIIMREFRSGSSRVLITTDLLAR 341
GDMDQ RD+IMREFRSGSSRVLITTDLL R
Sbjct: 304 GDMDQKERDVIMREFRSGSSRVLITTDLLNR 334
>UNIPROTKB|F1NTS2 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
EMBL:AADN02041230 ProteinModelPortal:F1NTS2
Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
Uniprot:F1NTS2
Length = 414
Score = 1156 (412.0 bits), Expect = 2.3e-117, P = 2.3e-117
Identities = 242/417 (58%), Positives = 305/417 (73%)
Query: 5 APEGSGFDARSFDSNMNNLLSEEGQ---DFFVSYD-EVYDSFDSMGLKENLLRGIYAYGF 60
A GS + S ++ EE +F S + +V +FD+MGL+E+LLRGIYAYGF
Sbjct: 1 AMSGSAGSGGTTGSARKRIMKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGF 60
Query: 61 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTREL 120
EKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTREL
Sbjct: 61 EKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTREL 120
Query: 121 AQQIEKVMRALGDYMGVK-VHACVGGTSVREDQRILSAGVHV---VVGTPGRVFDMLRRQ 176
A QI+KV + + +K +H +G D L AG V + G ++ M+RR+
Sbjct: 121 AVQIQKVGTSKSLPVKMKELHKAMGSFKQEVD---LPAGHEVARCISGIQLQLLYMIRRR 177
Query: 177 SLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMN 236
SLR I+M VLDEADEML++GFK+QIYD++++LP QV + SAT+P E LE+T KFM
Sbjct: 178 SLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMT 237
Query: 237 KPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLT 296
P+RILVKRDELTLEGIKQF V V++EEWK DTLCDLY+TL ITQ+VIF NT+RKVDWLT
Sbjct: 238 DPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLT 297
Query: 297 DQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDL 356
++MR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+DV QVSL+INYDL
Sbjct: 298 EKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDL 357
Query: 357 PTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
P E Y+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+ I+E+P NVADLI
Sbjct: 358 PNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 414
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 1155 (411.6 bits), Expect = 3.0e-117, P = 3.0e-117
Identities = 227/379 (59%), Positives = 286/379 (75%)
Query: 37 EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 96
+V +F+SM LK++LLRGIY+YGFE PS+IQ R I G DVI QAQSGTGKTATF
Sbjct: 20 KVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTI 79
Query: 97 GILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVRED-QRIL 155
G+LQ +D QAL+L+PTRELA QI +V++ LGDYM V A GG ++++D +++
Sbjct: 80 GLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQ 139
Query: 156 SAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR--GFKDQIYDIFQHLPGK 213
G V GTPGRV DM+++Q L+ ++M VLDEADE+LS GFK QIYDIF LP
Sbjct: 140 KHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKN 199
Query: 214 IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDL 273
QV V SATM + LE+TRKFMN PV+ILVKRDE++LEGIKQ+ VNVDKEEWK DTLCD+
Sbjct: 200 CQVVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDI 259
Query: 274 YETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVL 333
Y++L ITQ VIF NT++KVDWL+ ++ + V + HGDM Q RD +M +FR+G SRVL
Sbjct: 260 YDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVL 319
Query: 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLAD 393
I+TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINF+T+ D L +
Sbjct: 320 ISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLRE 379
Query: 394 IQRFYNVVIEELPANVADL 412
I++FY++ I +PAN A+L
Sbjct: 380 IEKFYSIKINPMPANFAEL 398
>TAIR|locus:2008296 [details] [associations]
symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
Uniprot:Q9C8J1
Length = 392
Score = 1149 (409.5 bits), Expect = 1.3e-116, P = 1.3e-116
Identities = 224/391 (57%), Positives = 286/391 (73%)
Query: 20 MNNLLSEEGQDFFVSYD-EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGL 78
M L EE F + + SFD MG+ + +LRG+Y YG++KPS IQQR +VP KG
Sbjct: 1 MEGTLDEENLVFETTKGIKPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGR 60
Query: 79 DVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVK 138
DVI QAQSGTGKT+ + Q ++ S + Q LVL+P+RELA Q EK ++A+G + ++
Sbjct: 61 DVIAQAQSGTGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQ 120
Query: 139 VHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG 198
HAC+GG S+ ED + L GVH V GTPGRV+DM++R SL+ +++ VLDE+DEMLS+G
Sbjct: 121 AHACIGGKSIGEDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKG 180
Query: 199 FKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHV 258
KDQIYD+++ LP IQV + SAT+P E LE+T KFM PVRILVK DELTLEGIKQ++V
Sbjct: 181 LKDQIYDVYRALPHDIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYV 240
Query: 259 NVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSR 318
+VDKEEWK DTLCDLY L I Q++IF NTR+KVDWLT++MRS + VS+ HGD Q R
Sbjct: 241 DVDKEEWKFDTLCDLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKER 300
Query: 319 DIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGV 378
D IM +FRS SRVLI +D+ ARGIDVQ VS VINYD+P PE Y+HRIGR+GRFGR+GV
Sbjct: 301 DDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGV 360
Query: 379 AINFVTRDDDRMLADIQRFYNVVIEELPANV 409
AINFV D + L DI+R Y I E+PA++
Sbjct: 361 AINFVKSSDMKDLKDIERHYGTKIREMPADL 391
>UNIPROTKB|F1LP27 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
Uniprot:F1LP27
Length = 312
Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
Identities = 219/301 (72%), Positives = 257/301 (85%)
Query: 117 TREL---AQQIEKVMRALGDYMGVKVHACVGGTSVRED-QRILSAGVHVVVGTPGRVFDM 172
+REL A +I+KV+ ALGDYMG HAC+GGT+VR + Q++ + H+VVGTPGRVFDM
Sbjct: 12 SRELYNYAFKIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDM 71
Query: 173 LRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITR 232
L R+ L P +I+MFVLDEADEMLSRGFKDQIY+IFQ L IQV + SATMP + LE+T+
Sbjct: 72 LNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTK 131
Query: 233 KFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKV 292
KFM P+RILVK++ELTLEGIKQF++NV++EEWKLDTLCDLYETL ITQ+VIF+NTRRKV
Sbjct: 132 KFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKV 191
Query: 293 DWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 352
DWLT++M +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVI
Sbjct: 192 DWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 251
Query: 353 NYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADL 412
NYDLPT ENY+HRIGR GRFGRKGVAINFVT +D R+L DI+ FYN +EE+P NVADL
Sbjct: 252 NYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADL 311
Query: 413 I 413
I
Sbjct: 312 I 312
>GENEDB_PFALCIPARUM|PFD1070w [details] [associations]
symbol:PFD1070w "eukaryotic initiation factor,
putative" species:5833 "Plasmodium falciparum" [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 1141 (406.7 bits), Expect = 9.1e-116, P = 9.1e-116
Identities = 214/377 (56%), Positives = 285/377 (75%)
Query: 37 EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 96
E+ SF+++G+ E LLRGIYAYGFEKPSAIQQRGI P G DVI Q+QSGTGKT F
Sbjct: 14 EICTSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQSQSGTGKTCVFAV 73
Query: 97 GILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILS 156
G L ++ + Q ++L+PTRELA+Q +KV AL DY+ V ++ C+GG + +D + L+
Sbjct: 74 GALNCVNRNLNETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCIGGKKMSDDIKALN 133
Query: 157 AGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQV 216
GVHV+ GTPGR++ ML + L+ YI+ V+DEADEML++GFK+Q+YDI++ L Q+
Sbjct: 134 NGVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRFLSPNTQI 193
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYET 276
+ SAT+P E LEIT KFM+KPV+ILVKRDELTLEGIKQF V+++KE+WK +TL DLYE+
Sbjct: 194 ILSSATLPQEVLEITNKFMHKPVKILVKRDELTLEGIKQFFVSIEKEQWKYETLADLYES 253
Query: 277 LAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITT 336
L ITQ+V+F NT+ KVDWLT +M + TV H M Q+ RD IM +FR RVLI+T
Sbjct: 254 LTITQAVVFCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCKFRVLIST 313
Query: 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQR 396
D+ RG+DVQ+VSLV+NYDLP E+Y+HRIGRSGRFGRKGVAINFV DD ++L DI++
Sbjct: 314 DIWGRGLDVQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQ 373
Query: 397 FYNVVIEELPANVADLI 413
+Y+ I+E+P N+ +L+
Sbjct: 374 YYSTQIDEMPMNITELL 390
>UNIPROTKB|Q8IFN9 [details] [associations]
symbol:PFD1070w "Eukaryotic initiation factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006446
"regulation of translational initiation" evidence=ISS] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 1141 (406.7 bits), Expect = 9.1e-116, P = 9.1e-116
Identities = 214/377 (56%), Positives = 285/377 (75%)
Query: 37 EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 96
E+ SF+++G+ E LLRGIYAYGFEKPSAIQQRGI P G DVI Q+QSGTGKT F
Sbjct: 14 EICTSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQSQSGTGKTCVFAV 73
Query: 97 GILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILS 156
G L ++ + Q ++L+PTRELA+Q +KV AL DY+ V ++ C+GG + +D + L+
Sbjct: 74 GALNCVNRNLNETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCIGGKKMSDDIKALN 133
Query: 157 AGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQV 216
GVHV+ GTPGR++ ML + L+ YI+ V+DEADEML++GFK+Q+YDI++ L Q+
Sbjct: 134 NGVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRFLSPNTQI 193
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYET 276
+ SAT+P E LEIT KFM+KPV+ILVKRDELTLEGIKQF V+++KE+WK +TL DLYE+
Sbjct: 194 ILSSATLPQEVLEITNKFMHKPVKILVKRDELTLEGIKQFFVSIEKEQWKYETLADLYES 253
Query: 277 LAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITT 336
L ITQ+V+F NT+ KVDWLT +M + TV H M Q+ RD IM +FR RVLI+T
Sbjct: 254 LTITQAVVFCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCKFRVLIST 313
Query: 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQR 396
D+ RG+DVQ+VSLV+NYDLP E+Y+HRIGRSGRFGRKGVAINFV DD ++L DI++
Sbjct: 314 DIWGRGLDVQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQ 373
Query: 397 FYNVVIEELPANVADLI 413
+Y+ I+E+P N+ +L+
Sbjct: 374 YYSTQIDEMPMNITELL 390
>UNIPROTKB|Q9NZE6 [details] [associations]
symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
UCSC:uc003fqv.3 Uniprot:Q9NZE6
Length = 312
Score = 1139 (406.0 bits), Expect = 1.5e-115, P = 1.5e-115
Identities = 215/292 (73%), Positives = 252/292 (86%)
Query: 123 QIEKVMRALGDYMGVKVHACVGGTSVRED-QRILSAGVHVVVGTPGRVFDMLRRQSLRPD 181
+I+KV+ ALGDYMG HAC+GGT+VR + Q++ + H+VVGTPGRVFDML R+ L P
Sbjct: 21 KIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPK 80
Query: 182 YIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRI 241
+I+MFVLDEADEMLSRGFKDQIY+IFQ L IQV + SATMP + LE+T+KFM P+RI
Sbjct: 81 WIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI 140
Query: 242 LVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRS 301
LVK++ELTLEGIKQF++NV++EEWKLDTLCDLYETL ITQ+VIF+NTRRKVDWLT++M +
Sbjct: 141 LVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 200
Query: 302 RDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPE 361
RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT E
Sbjct: 201 RDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 260
Query: 362 NYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
NY+HRIGR GRFGRKGVAINFVT +D R+L DI+ FYN +EE+P NVADLI
Sbjct: 261 NYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 312
>UNIPROTKB|E1BSE5 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
ArrayExpress:E1BSE5 Uniprot:E1BSE5
Length = 402
Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
Identities = 235/405 (58%), Positives = 298/405 (73%)
Query: 8 GSGFDARSFDSNMNNLLSEEGQ---DFFVSYD-EVYDSFDSMGLKENLLRGIYAYGFEKP 63
GS + S ++ EE +F S + +V +FD+MGL+E+LLRGIYAYGFEKP
Sbjct: 3 GSAGSGGTTGSARKRIMKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKP 62
Query: 64 SAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQ 123
SAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA Q
Sbjct: 63 SAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQ 122
Query: 124 IEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYI 183
I+K + A G+ V V V T +Q L+ + + + + DM+RR+SLR I
Sbjct: 123 IQKSLLATGE---VPVPPPVKCTVSSWEQCRLACFLSLFI-LQSEI-DMIRRRSLRTRAI 177
Query: 184 RMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILV 243
+M VLDEADEML++GFK+QIYD++++LP QV + SAT+P E LE+T KFM P+RILV
Sbjct: 178 KMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILV 237
Query: 244 KRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRD 303
KRDELTLEGIKQF V V++EEWK DTLCDLY+TL ITQ+VIF NT+RKVDWLT++MR +
Sbjct: 238 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN 297
Query: 304 HTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENY 363
TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y
Sbjct: 298 FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY 357
Query: 364 LHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPAN 408
+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+ I+E+P N
Sbjct: 358 IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMN 402
>UNIPROTKB|J3QS69 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000578495
Uniprot:J3QS69
Length = 300
Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
Identities = 199/298 (66%), Positives = 238/298 (79%)
Query: 12 DARSFDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGI 71
D+RS D+ + + EG +++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I
Sbjct: 6 DSRSRDNGPDGM-EPEGV-IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAI 63
Query: 72 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRAL 131
+P KG DVI QAQSGTGKTATF ILQQ++ + QALVLAPTRELAQQ KV+ AL
Sbjct: 64 LPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQ--KVVMAL 121
Query: 132 GDYMGVKVHACVGGTSVR-EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDE 190
GDYMG HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P YI+MFVLDE
Sbjct: 122 GDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDE 181
Query: 191 ADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTL 250
ADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTL
Sbjct: 182 ADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTL 241
Query: 251 EGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSA 308
EGI+QF++NV++EEWKLDTLCDLYETL ITQ+VIF+NTRRKVDWLT++M +RD TVSA
Sbjct: 242 EGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSA 299
>UNIPROTKB|J3QL43 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000584784
Uniprot:J3QL43
Length = 271
Score = 648 (233.2 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
Identities = 133/205 (64%), Positives = 156/205 (76%)
Query: 12 DARSFDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGI 71
D+RS D+ + + EG +++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I
Sbjct: 6 DSRSRDNGPDGM-EPEGV-IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAI 63
Query: 72 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRAL 131
+P KG DVI QAQSGTGKTATF ILQQ++ + QALVLAPTRELAQQI+KV+ AL
Sbjct: 64 LPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMAL 123
Query: 132 GDYMGVKVHACVGGTSVR-EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDE 190
GDYMG HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P YI+MFVLDE
Sbjct: 124 GDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDE 183
Query: 191 ADEMLSRGFKDQIYDIFQHLPGKIQ 215
ADEMLSRGFKDQIYDIFQ L Q
Sbjct: 184 ADEMLSRGFKDQIYDIFQKLNSNTQ 208
Score = 277 (102.6 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
Identities = 49/64 (76%), Positives = 61/64 (95%)
Query: 245 RDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDH 304
++ELTLEGI+QF++NV++EEWKLDTLCDLYETL ITQ+VIF+NTRRKVDWLT++M +RD
Sbjct: 208 QEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDF 267
Query: 305 TVSA 308
TVSA
Sbjct: 268 TVSA 271
>UNIPROTKB|J3KTB5 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000584860
Uniprot:J3KTB5
Length = 257
Score = 899 (321.5 bits), Expect = 4.0e-90, P = 4.0e-90
Identities = 173/248 (69%), Positives = 204/248 (82%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 10 NWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTAT 69
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVR-EDQ 152
F ILQQ++ + QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR E Q
Sbjct: 70 FAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQ 129
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
++ H++VGTPGRVFDML R+ L P YI+MFVLDEADEMLSRGFKDQIYDIFQ L
Sbjct: 130 KLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNS 189
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
QV + SATMP + LE+T+KFM P+RILVK++ELTLEGI+QF++NV++EEWKLDTLCD
Sbjct: 190 NTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCD 249
Query: 273 LYETLAIT 280
LYETL IT
Sbjct: 250 LYETLTIT 257
>WB|WBGene00018997 [details] [associations]
symbol:F57B9.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0003676 GO:GO:0019915 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 GeneTree:ENSGT00530000062880 KO:K03257
PIR:E88493 RefSeq:NP_498514.1 UniGene:Cel.32055
ProteinModelPortal:Q20935 SMR:Q20935 STRING:Q20935 PaxDb:Q20935
EnsemblMetazoa:F57B9.3 GeneID:186440 KEGG:cel:CELE_F57B9.3
UCSC:F57B9.3 CTD:186440 WormBase:F57B9.3 InParanoid:Q20935
NextBio:931850 Uniprot:Q20935
Length = 363
Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
Identities = 175/369 (47%), Positives = 251/369 (68%)
Query: 45 MGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 104
M LKE LLRGIY +GFEKPSAIQ+ + P G DV Q+Q+G+GKT ILQ +D
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 105 ESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVG 164
E Q ++LAP R +AQ+ + +++LG + V C+G + E+ +I HV++G
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLGFDTTAENDKIS----HVLMG 115
Query: 165 TPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMP 224
TP + + R I+MFVLDEADEMLS+GFKDQIY++F+ +P +QV + SATMP
Sbjct: 116 TPKDFLSNIPSDTSR---IKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMP 172
Query: 225 PEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVI 284
E L++T +FM P+RILVK+DELTLEGI+QF++NV K+EWK + LCDL +T TQ++I
Sbjct: 173 SEVLDVTNRFMRDPIRILVKKDELTLEGIRQFYINVQKDEWKFNCLCDLLKTSRETQALI 232
Query: 285 FVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGID 344
F NTRR+V LT+Q+ S VS HG+M+ N R+ ++++F S ++RVL+TTDL+ARG++
Sbjct: 233 FCNTRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMN 292
Query: 345 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEE 404
+++ SL+INYD+ ENY+ R GR G FG KG+ I+F T +D L I+ Y+ IEE
Sbjct: 293 IRK-SLIINYDVSGNMENYMLRNGRQGNFGSKGLPISFFTENDISDLKKIENHYSTRIEE 351
Query: 405 LPANVADLI 413
+P + + +
Sbjct: 352 MPESFLEYL 360
>UNIPROTKB|J3KSZ0 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC016876 HGNC:HGNC:3282
ChiTaRS:EIF4A1 Ensembl:ENST00000583389 Uniprot:J3KSZ0
Length = 230
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 155/216 (71%), Positives = 183/216 (84%)
Query: 127 VMRALGDYMGVKVHACVGGTSVR-EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRM 185
V+ ALGDYMG HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P YI+M
Sbjct: 2 VVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKM 61
Query: 186 FVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKR 245
FVLDEADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK+
Sbjct: 62 FVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKK 121
Query: 246 DELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHT 305
+ELTLEGI+QF++NV++EEWKLDTLCDLYETL ITQ+VIF+NTRRKVDWLT++M +RD T
Sbjct: 122 EELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFT 181
Query: 306 VSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLAR 341
VSA HGDMDQ RD+IMREFRSGSSRVLITTDLL +
Sbjct: 182 VSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLGK 217
>CGD|CAL0006152 [details] [associations]
symbol:DHH1 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0030996 "cell cycle arrest
in response to nitrogen starvation" evidence=IEA] [GO:0034063
"stress granule assembly" evidence=IEA] [GO:0000753 "cell
morphogenesis involved in conjugation with cellular fusion"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0000290 "deadenylation-dependent
decapping of nuclear-transcribed mRNA" evidence=IEA] [GO:0031142
"induction of conjugation upon nitrogen starvation" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0006152 GO:GO:0005524 GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037 eggNOG:COG0513
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_718704.1
RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3 SMR:Q5AAW3
GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 158/369 (42%), Positives = 224/369 (60%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF+ LK LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA+F LQ
Sbjct: 31 SFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQ 90
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVH 160
+ + + QAL+L PTRELA Q +V+R LG ++G + GGTS+R+D L VH
Sbjct: 91 LVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPVH 150
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
++VGTPGRV D+ R+ + +FV+DEAD+MLSR FK I I + P Q +FS
Sbjct: 151 ILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQILEFFPPNRQALLFS 210
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
AT P K + KP I + DELTL+GI QF+ V++++ KL L L+ L I
Sbjct: 211 ATFPLAVKSFMDKHLTKPYEINLM-DELTLKGISQFYAFVEEKQ-KLHCLNTLFSKLQIN 268
Query: 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLA 340
QS+IF N+ +V+ L ++ ++ +H M Q +R+ + EFR G R L+ +DLL
Sbjct: 269 QSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSDLLT 328
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNV 400
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN ++ +D L I++
Sbjct: 329 RGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWNDRYSLYKIEQELGT 388
Query: 401 VIEELPANV 409
I+ +PA +
Sbjct: 389 EIKPIPATI 397
>UNIPROTKB|Q5AAW3 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:237561 "Candida albicans SC5314" [GO:0010494 "cytoplasmic
stress granule" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0006152 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_718704.1 RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3
SMR:Q5AAW3 GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 158/369 (42%), Positives = 224/369 (60%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF+ LK LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA+F LQ
Sbjct: 31 SFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQ 90
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVH 160
+ + + QAL+L PTRELA Q +V+R LG ++G + GGTS+R+D L VH
Sbjct: 91 LVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPVH 150
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
++VGTPGRV D+ R+ + +FV+DEAD+MLSR FK I I + P Q +FS
Sbjct: 151 ILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQILEFFPPNRQALLFS 210
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
AT P K + KP I + DELTL+GI QF+ V++++ KL L L+ L I
Sbjct: 211 ATFPLAVKSFMDKHLTKPYEINLM-DELTLKGISQFYAFVEEKQ-KLHCLNTLFSKLQIN 268
Query: 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLA 340
QS+IF N+ +V+ L ++ ++ +H M Q +R+ + EFR G R L+ +DLL
Sbjct: 269 QSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSDLLT 328
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNV 400
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN ++ +D L I++
Sbjct: 329 RGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWNDRYSLYKIEQELGT 388
Query: 401 VIEELPANV 409
I+ +PA +
Sbjct: 389 EIKPIPATI 397
>UNIPROTKB|A4R715 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001234 GO:GO:0008026 eggNOG:COG0513 KO:K12614
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_003716556.1
GeneID:2676879 KEGG:mgr:MGG_03388 OrthoDB:EOG4QJVWF Uniprot:A4R715
Length = 535
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 149/368 (40%), Positives = 224/368 (60%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F++ GLK +LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L+
Sbjct: 49 FENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALET 108
Query: 102 LDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHV 161
++ + + Q L+L PTRELA Q +V + LG ++G+ V GGT++R+D L VH+
Sbjct: 109 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTTLRDDILRLQDPVHI 168
Query: 162 VVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSA 221
VVGTPGR+ D+ + MF++DEAD++LS F I + Q P QV +FSA
Sbjct: 169 VVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQLLQFHPKDRQVMLFSA 228
Query: 222 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQ 281
T P E + K M P I + DELTL GI Q++ V++++ K+ L L+ L I Q
Sbjct: 229 TFPISVKEFSDKNMTNPYEINLM-DELTLRGITQYYAFVEEKQ-KVHCLNTLFSKLQINQ 286
Query: 282 SVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLAR 341
S+IF N+ +V+ L ++ ++ +H M Q +R+ + +FR+G R L+ +DLL R
Sbjct: 287 SIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQQARNRVFHDFRNGVCRNLVCSDLLTR 346
Query: 342 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVV 401
GID+Q V++VIN+D P E YLHRIGRSGR+G G+AIN ++ +D L +I+R
Sbjct: 347 GIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLISWEDRFNLYNIERDLGTE 406
Query: 402 IEELPANV 409
I+ +P+ +
Sbjct: 407 IQPIPSTI 414
>SGD|S000002319 [details] [associations]
symbol:DHH1 "Cytoplasmic DExD/H-box helicase, stimulates mRNA
decapping" species:4932 "Saccharomyces cerevisiae" [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=IMP] [GO:0003724 "RNA helicase activity" evidence=IGI;ISS]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002319 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 EMBL:BK006938 GO:GO:0003723
GO:GO:0000753 GO:GO:0000932 EMBL:Z67750 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0034063 GO:GO:0008026 eggNOG:COG0513
GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000290 OrthoDB:EOG4QJVWF EMBL:X66057 EMBL:Z74208 PIR:S31229
RefSeq:NP_010121.1 PDB:1S2M PDBsum:1S2M ProteinModelPortal:P39517
SMR:P39517 DIP:DIP-1243N IntAct:P39517 MINT:MINT-385061
STRING:P39517 PaxDb:P39517 PeptideAtlas:P39517 EnsemblFungi:YDL160C
GeneID:851394 KEGG:sce:YDL160C CYGD:YDL160c
EvolutionaryTrace:P39517 NextBio:968552 Genevestigator:P39517
GermOnline:YDL160C Uniprot:P39517
Length = 506
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 152/370 (41%), Positives = 222/370 (60%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
++F+ LK LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L
Sbjct: 46 NTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTL 105
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159
+++ + + QAL++ PTRELA Q +V+R LG + G+ GGT++R+D L+ V
Sbjct: 106 EKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETV 165
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
H++VGTPGRV D+ R+ +F++DEAD+MLSR FK I I LP Q +F
Sbjct: 166 HILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLF 225
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAI 279
SAT P E K ++KP I + +ELTL+GI Q++ V++ + KL L L+ L I
Sbjct: 226 SATFPLTVKEFMVKHLHKPYEINLM-EELTLKGITQYYAFVEERQ-KLHCLNTLFSKLQI 283
Query: 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLL 339
Q++IF N+ +V+ L ++ ++ +H M Q R+ + EFR G R L+ +DLL
Sbjct: 284 NQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLL 343
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYN 399
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN + +D L I++
Sbjct: 344 TRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYKIEQELG 403
Query: 400 VVIEELPANV 409
I +PA +
Sbjct: 404 TEIAAIPATI 413
>UNIPROTKB|E1BDM8 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:DAAA02040478
EMBL:DAAA02040479 IPI:IPI00697295 RefSeq:NP_001137339.1
UniGene:Bt.12357 PRIDE:E1BDM8 Ensembl:ENSBTAT00000011952
GeneID:513906 KEGG:bta:513906 NextBio:20871085 Uniprot:E1BDM8
Length = 483
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 145/371 (39%), Positives = 225/371 (60%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L
Sbjct: 96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILSAG 158
++LD + QA+V+ PTRELA Q+ ++ + +MG KV A GGT++R+D L
Sbjct: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT 215
Query: 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGV 218
VHVV+ TPGR+ D++++ + D+++M VLDEAD++LS+ F + DI LP Q+ +
Sbjct: 216 VHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILL 275
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLA 278
+SAT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L
Sbjct: 276 YSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQ 333
Query: 279 ITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL 338
I QS+IF N+ ++V+ L ++ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 339 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFY 398
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I+
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 399 NVVIEELPANV 409
I+ +P+N+
Sbjct: 454 GTEIKPIPSNI 464
>UNIPROTKB|E2RR01 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:AAEX03003444
RefSeq:XP_849975.1 Ensembl:ENSCAFT00000019743 GeneID:479414
KEGG:cfa:479414 NextBio:20854600 Uniprot:E2RR01
Length = 483
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 145/371 (39%), Positives = 225/371 (60%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L
Sbjct: 96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILSAG 158
++LD + QA+V+ PTRELA Q+ ++ + +MG KV A GGT++R+D L
Sbjct: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT 215
Query: 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGV 218
VHVV+ TPGR+ D++++ + D+++M VLDEAD++LS+ F + DI LP Q+ +
Sbjct: 216 VHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILL 275
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLA 278
+SAT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L
Sbjct: 276 YSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQ 333
Query: 279 ITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL 338
I QS+IF N+ ++V+ L ++ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 339 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFY 398
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I+
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 399 NVVIEELPANV 409
I+ +P+N+
Sbjct: 454 GTEIKPIPSNI 464
>UNIPROTKB|P26196 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0004386 "helicase activity" evidence=TAS]
[GO:0003724 "RNA helicase activity" evidence=TAS] [GO:0016442
"RNA-induced silencing complex" evidence=IDA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IDA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0043928 "exonucleolytic
nuclear-transcribed mRNA catabolic process involved in
deadenylation-dependent decay" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0010467 GO:GO:0003723 GO:GO:0000932 GO:GO:0016442
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043928 HOVERGEN:HBG106685 OrthoDB:EOG4J1182
EMBL:Z11685 EMBL:BC065007 EMBL:D17532 IPI:IPI00030320 PIR:S22651
RefSeq:NP_001244120.1 RefSeq:NP_004388.2 UniGene:Hs.408461 PDB:1VEC
PDB:2WAX PDB:2WAY PDBsum:1VEC PDBsum:2WAX PDBsum:2WAY
ProteinModelPortal:P26196 SMR:P26196 DIP:DIP-29195N IntAct:P26196
STRING:P26196 PhosphoSite:P26196 DMDM:116241327
DOSAC-COBS-2DPAGE:P26196 PaxDb:P26196 PeptideAtlas:P26196
PRIDE:P26196 DNASU:1656 Ensembl:ENST00000264018
Ensembl:ENST00000526070 Ensembl:ENST00000534980 GeneID:1656
KEGG:hsa:1656 UCSC:uc001pub.2 CTD:1656 GeneCards:GC11M118654
HGNC:HGNC:2747 HPA:CAB004668 HPA:HPA024201 HPA:HPA026644 MIM:600326
neXtProt:NX_P26196 PharmGKB:PA27229 InParanoid:P26196
PhylomeDB:P26196 ChiTaRS:DDX6 EvolutionaryTrace:P26196
GenomeRNAi:1656 NextBio:6820 ArrayExpress:P26196 Bgee:P26196
CleanEx:HS_DDX6 Genevestigator:P26196 GermOnline:ENSG00000110367
Uniprot:P26196
Length = 483
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 145/371 (39%), Positives = 225/371 (60%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L
Sbjct: 96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILSAG 158
++LD + QA+V+ PTRELA Q+ ++ + +MG KV A GGT++R+D L
Sbjct: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT 215
Query: 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGV 218
VHVV+ TPGR+ D++++ + D+++M VLDEAD++LS+ F + DI LP Q+ +
Sbjct: 216 VHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILL 275
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLA 278
+SAT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L
Sbjct: 276 YSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQ 333
Query: 279 ITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL 338
I QS+IF N+ ++V+ L ++ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 339 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFY 398
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I+
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 399 NVVIEELPANV 409
I+ +P+N+
Sbjct: 454 GTEIKPIPSNI 464
>UNIPROTKB|F1SAJ5 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:FP089499
RefSeq:XP_003129962.1 RefSeq:XP_003357372.1 UniGene:Ssc.97711
Ensembl:ENSSSCT00000016463 GeneID:100515499 KEGG:ssc:100515499
Uniprot:F1SAJ5
Length = 483
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 145/371 (39%), Positives = 225/371 (60%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L
Sbjct: 96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILSAG 158
++LD + QA+V+ PTRELA Q+ ++ + +MG KV A GGT++R+D L
Sbjct: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT 215
Query: 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGV 218
VHVV+ TPGR+ D++++ + D+++M VLDEAD++LS+ F + DI LP Q+ +
Sbjct: 216 VHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILL 275
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLA 278
+SAT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L
Sbjct: 276 YSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQ 333
Query: 279 ITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL 338
I QS+IF N+ ++V+ L ++ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 339 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFY 398
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I+
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 399 NVVIEELPANV 409
I+ +P+N+
Sbjct: 454 GTEIKPIPSNI 464
>MGI|MGI:104976 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 6"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=ISO] [GO:0016442 "RNA-induced silencing complex"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:104976 GO:GO:0005524
GO:GO:0003723 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG106685 OrthoDB:EOG4J1182 CTD:1656
EMBL:D50494 EMBL:AK054144 EMBL:AK148483 EMBL:BC021452 EMBL:AF038995
IPI:IPI00109932 RefSeq:NP_001104296.1 RefSeq:NP_031867.1
RefSeq:NP_851841.2 UniGene:Mm.267061 ProteinModelPortal:P54823
SMR:P54823 IntAct:P54823 STRING:P54823 PhosphoSite:P54823
PaxDb:P54823 PRIDE:P54823 Ensembl:ENSMUST00000170489 GeneID:13209
KEGG:mmu:13209 UCSC:uc009pdy.2 InParanoid:P54823 NextBio:283376
Bgee:P54823 CleanEx:MM_DDX6 Genevestigator:P54823
GermOnline:ENSMUSG00000032097 Uniprot:P54823
Length = 483
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 145/371 (39%), Positives = 225/371 (60%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L
Sbjct: 96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILSAG 158
++LD + QA+V+ PTRELA Q+ ++ + +MG KV A GGT++R+D L
Sbjct: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT 215
Query: 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGV 218
VHVV+ TPGR+ D++++ + D+++M VLDEAD++LS+ F + DI LP Q+ +
Sbjct: 216 VHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILL 275
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLA 278
+SAT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L
Sbjct: 276 YSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQ 333
Query: 279 ITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL 338
I QS+IF N+ ++V+ L ++ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 339 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFY 398
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I+
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 399 NVVIEELPANV 409
I+ +P+N+
Sbjct: 454 GTEIKPIPSNI 464
>RGD|1564560 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box helicase 6"
species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA;ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA;ISO] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA;ISO] [GO:0033962 "cytoplasmic mRNA processing
body assembly" evidence=IEA;ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1564560
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4J1182 CTD:1656
IPI:IPI00558056 RefSeq:NP_001102762.1 UniGene:Rn.231713
Ensembl:ENSRNOT00000017391 GeneID:500988 KEGG:rno:500988
UCSC:RGD:1564560 NextBio:707903 Uniprot:D3ZD73
Length = 483
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 145/371 (39%), Positives = 225/371 (60%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L
Sbjct: 96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILSAG 158
++LD + QA+V+ PTRELA Q+ ++ + +MG KV A GGT++R+D L
Sbjct: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT 215
Query: 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGV 218
VHVV+ TPGR+ D++++ + D+++M VLDEAD++LS+ F + DI LP Q+ +
Sbjct: 216 VHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILL 275
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLA 278
+SAT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L
Sbjct: 276 YSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQ 333
Query: 279 ITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL 338
I QS+IF N+ ++V+ L ++ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 339 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFY 398
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I+
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 399 NVVIEELPANV 409
I+ +P+N+
Sbjct: 454 GTEIKPIPSNI 464
>TAIR|locus:2098886 [details] [associations]
symbol:AT3G61240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006417 GO:GO:0006397 GO:GO:0003723
EMBL:AL137898 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AJ010464 EMBL:AY120712 EMBL:BT000038 IPI:IPI00548726
PIR:T47916 PIR:T51743 RefSeq:NP_191683.1 RefSeq:NP_974472.1
UniGene:At.20236 ProteinModelPortal:Q9M2E0 SMR:Q9M2E0 STRING:Q9M2E0
PaxDb:Q9M2E0 PRIDE:Q9M2E0 EnsemblPlants:AT3G61240.1
EnsemblPlants:AT3G61240.2 GeneID:825296 KEGG:ath:AT3G61240
GeneFarm:928 TAIR:At3g61240 InParanoid:Q9M2E0 OMA:PLAMDQR
PhylomeDB:Q9M2E0 ProtClustDB:CLSN2683443 Genevestigator:Q9M2E0
GermOnline:AT3G61240 Uniprot:Q9M2E0
Length = 498
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 144/374 (38%), Positives = 225/374 (60%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK +LL+GIY GFEKPS IQ+ I G D++ +A++GTGKT FC +L
Sbjct: 124 NEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVL 183
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159
+++D + QA++L PTRELA Q +V + L Y+ ++V GGTS+R+D L V
Sbjct: 184 EKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPV 243
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
H++VGTPGR+ D+ ++ M V+DEAD++LS F+ + ++ Q LP Q +F
Sbjct: 244 HLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMF 303
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAI 279
SAT P + + KP ++ D+LTL G+ Q++ V++ + K+ L L+ L I
Sbjct: 304 SATFPVTVKAFKDRHLRKPY-VINLMDQLTLMGVTQYYAFVEERQ-KVHCLNTLFSKLQI 361
Query: 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLL 339
QS+IF N+ +V+ L ++ ++ H M Q+ R+ + EFR+G+ R L+ TDL
Sbjct: 362 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLF 421
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYN 399
RGID+Q V++VIN+D P E+YLHR+GRSGRFG G+A+N VT +D + ++
Sbjct: 422 TRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELG 481
Query: 400 VVIEELPANVADLI 413
I+ +P+N+ I
Sbjct: 482 TEIKPIPSNIDQAI 495
>TAIR|locus:2127043 [details] [associations]
symbol:RH8 "RNAhelicase-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016032 "viral reproduction" evidence=IMP] [GO:0019048
"virus-host interaction" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0019048 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 EMBL:AF058919 EMBL:AL161472
GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 OMA:QFMEKHL
ProtClustDB:CLSN2683443 EMBL:AJ010460 EMBL:AY080837 EMBL:AY113985
IPI:IPI00531108 PIR:T01230 PIR:T51741 RefSeq:NP_191975.2
RefSeq:NP_849535.1 UniGene:At.25593 UniGene:At.67100
UniGene:At.71300 ProteinModelPortal:Q8RXK6 SMR:Q8RXK6 STRING:Q8RXK6
PaxDb:Q8RXK6 PRIDE:Q8RXK6 EnsemblPlants:AT4G00660.1
EnsemblPlants:AT4G00660.2 GeneID:828042 KEGG:ath:AT4G00660
GeneFarm:919 TAIR:At4g00660 InParanoid:Q8RXK6 PhylomeDB:Q8RXK6
Genevestigator:Q8RXK6 GermOnline:AT4G00660 Uniprot:Q8RXK6
Length = 505
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 142/374 (37%), Positives = 228/374 (60%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC +L
Sbjct: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVL 190
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159
+++D ++ QA+++ PTRELA Q +V + LG ++ ++V GGTS+++D L V
Sbjct: 191 EKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 250
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
H++VGTPGR+ D+ ++ + V+DEAD++LS+ F+ + + LP Q+ +F
Sbjct: 251 HLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMF 310
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAI 279
SAT P + +F+ P ++ DELTL+GI QF+ V++ + K+ L L+ L I
Sbjct: 311 SATFPVTVKDFKDRFLTNPY-VINLMDELTLKGITQFYAFVEERQ-KIHCLNTLFSKLQI 368
Query: 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLL 339
QS+IF N+ +V+ L ++ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 369 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 428
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYN 399
RGID+Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L I++
Sbjct: 429 TRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 488
Query: 400 VVIEELPANVADLI 413
I+++P ++ I
Sbjct: 489 TEIKQIPPHIDQAI 502
>CGD|CAL0000067 [details] [associations]
symbol:DBP5 species:5476 "Candida albicans" [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0000822 "inositol
hexakisphosphate binding" evidence=IEA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000067 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
EMBL:AACQ01000014 EMBL:AACQ01000013 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_721619.1 RefSeq:XP_721738.1 ProteinModelPortal:Q5AJD0
PRIDE:Q5AJD0 GeneID:3636564 GeneID:3636693 KEGG:cal:CaO19.1661
KEGG:cal:CaO19.9230 Uniprot:Q5AJD0
Length = 540
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 153/379 (40%), Positives = 225/379 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGI 98
SF+ +GL LL+G+YA F KPS IQ++ + ++I Q+QSGTGKTA F +
Sbjct: 151 SFEELGLSPELLKGLYAMKFNKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFSLTM 210
Query: 99 LQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAG 158
L ++D Q L L+PTRELA+Q +V+ +G + + V R S
Sbjct: 211 LSRVDPTIKMPQCLCLSPTRELARQTLEVITTMGKFTNITTQLVVPNAIPRGS----SVN 266
Query: 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEML-SRGFKDQIYDIFQHLPGKIQVG 217
V+VGTPG D++RR+ L +++FVLDEAD ML ++G DQ + + LP +Q+
Sbjct: 267 AQVLVGTPGIAIDLIRRRQLNLSKMKVFVLDEADNMLEAQGLGDQAIRVKKALPRGVQLV 326
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
+FSAT P E E + + + +K++EL ++GIKQ +++ E+ K + LC+LY L
Sbjct: 327 LFSATFPTEVREYAERLVPDANSLELKQEELNVDGIKQLYMDCRSEQHKFEVLCELYGLL 386
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
I S+IFV + D L +M+ HTVS HG +D RD ++ +FR G S+VLITT+
Sbjct: 387 TIGSSIIFVEKKETADVLYGKMKKEGHTVSVLHGGLDNTDRDRLIDDFREGRSKVLITTN 446
Query: 338 LLARGIDVQQVSLVINYDLPTQ------PENYLHRIGRSGRFGRKGVAINFV--TRDDDR 389
+LARGID+ VS+V+NYD+PT P YLHRIGR+GRFGR GV+I+F+ R D
Sbjct: 447 VLARGIDIASVSMVVNYDMPTDKYGKPDPSTYLHRIGRTGRFGRVGVSISFIHDRRSYDI 506
Query: 390 MLADIQRFYNVVIEELPAN 408
++A F NV + +P +
Sbjct: 507 LMAIKAYFGNVEMTRVPTD 525
>TAIR|locus:2050715 [details] [associations]
symbol:AT2G45810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006417 GO:GO:0006397
GO:GO:0003723 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC004665 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF ProtClustDB:CLSN2683443 EMBL:AY039862
EMBL:BT002709 EMBL:AJ010459 IPI:IPI00528597 PIR:T02466 PIR:T51740
RefSeq:NP_182105.1 UniGene:At.46 ProteinModelPortal:Q94BV4
SMR:Q94BV4 IntAct:Q94BV4 STRING:Q94BV4 PaxDb:Q94BV4 PRIDE:Q94BV4
EnsemblPlants:AT2G45810.1 GeneID:819189 KEGG:ath:AT2G45810
GeneFarm:917 TAIR:At2g45810 InParanoid:Q94BV4 PhylomeDB:Q94BV4
Genevestigator:Q94BV4 GermOnline:AT2G45810 Uniprot:Q94BV4
Length = 528
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 145/368 (39%), Positives = 224/368 (60%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK +LLRGIY GFEKPS IQ+ I G D++ +A++GTGKT FC L
Sbjct: 154 NEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTL 213
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159
+++D E+ QA++L PTRELA Q +V + L Y+ ++V GGTS+R+D L V
Sbjct: 214 EKIDPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPV 273
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
H++VGTPGR+ D+ ++ M V+DEAD++LS F+ I ++ Q LP Q+ +F
Sbjct: 274 HLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILMF 333
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAI 279
SAT P +++ KP I+ D+LTL G+ Q++ V++ + K+ L L+ L I
Sbjct: 334 SATFPVTVKSFKDRYLKKPY-IINLMDQLTLMGVTQYYAFVEERQ-KVHCLNTLFSKLQI 391
Query: 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLL 339
QS+IF N+ +V+ L ++ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 392 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLF 451
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYN 399
RGID+Q V++VIN+D P E+YLHR+GRSGRFG G+A+N VT +D + ++
Sbjct: 452 TRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELG 511
Query: 400 VVIEELPA 407
I+ +P+
Sbjct: 512 TEIKPIPS 519
>UNIPROTKB|Q5ZKB9 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962 GO:GO:0008026
eggNOG:COG0513 GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 HSSP:P26196
EMBL:AJ720165 IPI:IPI00595692 UniGene:Gga.2331
ProteinModelPortal:Q5ZKB9 SMR:Q5ZKB9 Ensembl:ENSGALT00000012405
HOVERGEN:HBG106685 InParanoid:Q5ZKB9 OrthoDB:EOG4J1182
ArrayExpress:Q5ZKB9 Uniprot:Q5ZKB9
Length = 483
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 144/371 (38%), Positives = 225/371 (60%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L
Sbjct: 96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILSAG 158
++LD + QA+V+ PTRELA Q+ ++ + +MG KV A GGT++R+D L
Sbjct: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT 215
Query: 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGV 218
VHVV+ TPGR+ D++++ + ++++M VLDEAD++LS+ F + DI LP Q+ +
Sbjct: 216 VHVVIATPGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILL 275
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLA 278
+SAT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L
Sbjct: 276 YSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQ 333
Query: 279 ITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL 338
I QS+IF N+ ++V+ L ++ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 339 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFY 398
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I+
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 399 NVVIEELPANV 409
I+ +P+N+
Sbjct: 454 GTEIKPIPSNI 464
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 143/371 (38%), Positives = 223/371 (60%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVH 160
++D Q +V+APTRELA Q+ + + +G + V++ GG + R L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
++VGTPGR+ D + R++LR + VLDEADEML+ GF + I I +P Q +FS
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
ATMP I +FM +P I VK E+T+ I+QF++ V +E+ K D L L + +
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEV-QEKKKFDVLTRLLDIQSPE 241
Query: 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLA 340
+++F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNV 400
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I+R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 401 VIEELPANVAD 411
++ + A D
Sbjct: 362 KMDRMDAPTLD 372
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 143/371 (38%), Positives = 223/371 (60%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVH 160
++D Q +V+APTRELA Q+ + + +G + V++ GG + R L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
++VGTPGR+ D + R++LR + VLDEADEML+ GF + I I +P Q +FS
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
ATMP I +FM +P I VK E+T+ I+QF++ V +E+ K D L L + +
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEV-QEKKKFDVLTRLLDIQSPE 241
Query: 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLA 340
+++F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNV 400
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I+R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 401 VIEELPANVAD 411
++ + A D
Sbjct: 362 KMDRMDAPTLD 372
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 143/371 (38%), Positives = 223/371 (60%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVH 160
++D Q +V+APTRELA Q+ + + +G + V++ GG + R L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
++VGTPGR+ D + R++LR + VLDEADEML+ GF + I I +P Q +FS
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
ATMP I +FM +P I VK E+T+ I+QF++ V +E+ K D L L + +
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEV-QEKKKFDVLTRLLDIQSPE 241
Query: 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLA 340
+++F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNV 400
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I+R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 401 VIEELPANVAD 411
++ + A D
Sbjct: 362 KMDRMDAPTLD 372
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 143/371 (38%), Positives = 223/371 (60%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVH 160
++D Q +V+APTRELA Q+ + + +G + V++ GG + R L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
++VGTPGR+ D + R++LR + VLDEADEML+ GF + I I +P Q +FS
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
ATMP I +FM +P I VK E+T+ I+QF++ V +E+ K D L L + +
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEV-QEKKKFDVLTRLLDIQSPE 241
Query: 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLA 340
+++F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNV 400
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I+R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 401 VIEELPANVAD 411
++ + A D
Sbjct: 362 KMDRMDAPTLD 372
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 143/371 (38%), Positives = 223/371 (60%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVH 160
++D Q +V+APTRELA Q+ + + +G + V++ GG + R L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
++VGTPGR+ D + R++LR + VLDEADEML+ GF + I I +P Q +FS
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
ATMP I +FM +P I VK E+T+ I+QF++ V +E+ K D L L + +
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEV-QEKKKFDVLTRLLDIQSPE 241
Query: 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLA 340
+++F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNV 400
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I+R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 401 VIEELPANVAD 411
++ + A D
Sbjct: 362 KMDRMDAPTLD 372
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 143/371 (38%), Positives = 223/371 (60%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVH 160
++D Q +V+APTRELA Q+ + + +G + V++ GG + R L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
++VGTPGR+ D + R++LR + VLDEADEML+ GF + I I +P Q +FS
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
ATMP I +FM +P I VK E+T+ I+QF++ V +E+ K D L L + +
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEV-QEKKKFDVLTRLLDIQSPE 241
Query: 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLA 340
+++F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNV 400
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I+R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 401 VIEELPANVAD 411
++ + A D
Sbjct: 362 KMDRMDAPTLD 372
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 143/371 (38%), Positives = 223/371 (60%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVH 160
++D Q +V+APTRELA Q+ + + +G + V++ GG + R L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
++VGTPGR+ D + R++LR + VLDEADEML+ GF + I I +P Q +FS
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
ATMP I +FM +P I VK E+T+ I+QF++ V +E+ K D L L + +
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEV-QEKKKFDVLTRLLDIQSPE 241
Query: 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLA 340
+++F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNV 400
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I+R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 401 VIEELPANVAD 411
++ + A D
Sbjct: 362 KMDRMDAPTLD 372
>ASPGD|ASPL0000065093 [details] [associations]
symbol:AN7659 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0000822 "inositol hexakisphosphate binding" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 EMBL:BN001304 EMBL:AACD01000130 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_680928.1 ProteinModelPortal:Q5AVM1
EnsemblFungi:CADANIAT00000783 GeneID:2869488 KEGG:ani:AN7659.2
OMA:PQAICLA OrthoDB:EOG4B2X5R Uniprot:Q5AVM1
Length = 477
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 174/429 (40%), Positives = 253/429 (58%)
Query: 1 MEGIAPEGSGFDARSFDSNMNNLLSEEGQDFFVSYDEVYD--SFDSMGLKENLLRGIYAY 58
++G A G D + N+ LS+ D + +Y +F+ +GL +L+G+ A
Sbjct: 31 LDGAASNQGGSDLAEPEYNVEVKLSDLQAD---PNNPLYSVKNFEDLGLDPRILQGLSAM 87
Query: 59 GFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDYESLQCQ----A 111
F KPS IQ+R + P G +++ Q+QSGTGKTA F IL +LD S Q Q A
Sbjct: 88 NFRKPSKIQERAL-PLLMGNPPKNLVGQSQSGTGKTAAFVLNILSRLDLSSEQAQKTPQA 146
Query: 112 LVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQ--RILSAGVHVVVGTPGRV 169
L+LAPTRELA+QI V++ +G ++ +H GT+V D R VVVGTPG V
Sbjct: 147 LILAPTRELARQIVGVIQVMGKFLD-GLHI---GTAVPADTNARPTRMEASVVVGTPGTV 202
Query: 170 FDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQHLPGKIQVGVFSATMPPEAL 228
DM++++ + +++ VLDEAD ML + G DQ + LP IQV +FSAT P
Sbjct: 203 MDMIKKRIMVAAKLKVIVLDEADNMLDQQGLGDQCIRVKALLPRDIQVVLFSATFPAHVH 262
Query: 229 EITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNT 288
+ KF + ++ +ELT+EGIKQ +++ EE K TL LY L + S+IFV T
Sbjct: 263 QYASKFAPAANELTLQHEELTVEGIKQLYLDCASEEDKYRTLVQLYGLLTVGSSIIFVKT 322
Query: 289 RRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQV 348
R + +M + HTV++ G ++ + RD I+ +FR+G ++VLITT++LARGIDV V
Sbjct: 323 RASAVEIERRMVAEGHTVASLTGGIEGSQRDQIIDQFRAGHAKVLITTNVLARGIDVSTV 382
Query: 349 SLVINYDLPT--QPEN---------YLHRIGRSGRFGRKGVAINFVT-RDDDRMLADIQR 396
S+VINYD+P QP N YLHRIGR+GRFGR GV+I+FV+ R++ ML IQ+
Sbjct: 383 SMVINYDIPELHQPPNRPRQADFQTYLHRIGRTGRFGRVGVSISFVSNREEWEMLNQIQK 442
Query: 397 FYNVVIEEL 405
++N I+ +
Sbjct: 443 YFNTDIQRI 451
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 141/356 (39%), Positives = 220/356 (61%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F +GL + +++ I GFE+ + IQ + I + DVI QAQ+GTGKTA F I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVH 160
+++ ++ QALV+APTRELA Q+ + + +G V+V GG + R L H
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPH 122
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
V+VGTPGR+ D + R +LR +++ VLDEADEML+ GF + I I H+P + Q +FS
Sbjct: 123 VIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFS 182
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
ATMP I +FMN+P + VK E+T+ I+Q+++ V +++ K D L L + A
Sbjct: 183 ATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKK-KFDILTRLLDIQAPE 241
Query: 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLA 340
+++F T+R+VD L + + R + HGD+ Q R ++R+F+ G+ +L+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAA 301
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQR 396
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+ GVA+ FVT + L I+R
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIER 357
>UNIPROTKB|P54824 [details] [associations]
symbol:ddx6 "ATP-dependent RNA helicase ddx6" species:8355
"Xenopus laevis" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003723
GO:GO:0030529 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG106685 CTD:1656 EMBL:X92421 EMBL:BC170228 EMBL:BC170230
RefSeq:NP_001083721.1 UniGene:Xl.157 IntAct:P54824 PRIDE:P54824
GeneID:399080 KEGG:xla:399080 Xenbase:XB-GENE-922237 Uniprot:P54824
Length = 481
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 145/371 (39%), Positives = 225/371 (60%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L
Sbjct: 95 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 154
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILSAG 158
++LD + QA+V+ PTRELA Q+ ++ + +MG KV A GGT++R+D L
Sbjct: 155 ERLDLKKDCIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT 214
Query: 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGV 218
VHVV+ TPGR+ D++++ + D+I+M VLDEAD++LS+ F + DI LP Q+ +
Sbjct: 215 VHVVIATPGRILDLIKKGVAKVDHIQMIVLDEADKLLSQDFMQIMEDIIMTLPKNRQILL 274
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLA 278
+SAT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L
Sbjct: 275 YSATFPLSVQKFMTLHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQ 332
Query: 279 ITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL 338
I QS+IF N+ ++V+ L ++ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 333 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 392
Query: 339 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFY 398
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I+
Sbjct: 393 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 452
Query: 399 NVVIEELPANV 409
I+ +P+++
Sbjct: 453 GTEIKPIPSSI 463
>UNIPROTKB|E1C8R1 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 UniGene:Gga.2331 CTD:1656 EMBL:AADN02058042
EMBL:AADN02058043 IPI:IPI00818395 RefSeq:NP_001006319.2
PRIDE:E1C8R1 Ensembl:ENSGALT00000040594 GeneID:419783
KEGG:gga:419783 NextBio:20822787 ArrayExpress:E1C8R1 Uniprot:E1C8R1
Length = 483
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 143/371 (38%), Positives = 225/371 (60%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L
Sbjct: 96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILSAG 158
++LD + QA+V+ PTRELA Q+ ++ + +MG KV A GGT++R+D L
Sbjct: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT 215
Query: 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGV 218
VHVV+ TPGR+ D++++ + ++++M VLDEA+++LS+ F + DI LP Q+ +
Sbjct: 216 VHVVIATPGRILDLIKKGVAKVEHVQMIVLDEANKLLSQDFVQIMEDIILTLPKNRQILL 275
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLA 278
+SAT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L
Sbjct: 276 YSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQ 333
Query: 279 ITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL 338
I QS+IF N+ ++V+ L ++ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 339 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFY 398
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I+
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 399 NVVIEELPANV 409
I+ +P+N+
Sbjct: 454 GTEIKPIPSNI 464
>ZFIN|ZDB-GENE-030131-6611 [details] [associations]
symbol:wu:fk48d07 "wu:fk48d07" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-6611 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF EMBL:CR391937 IPI:IPI00901625
RefSeq:XP_001340860.1 UniGene:Dr.104819 UniGene:Dr.127773
Ensembl:ENSDART00000114495 GeneID:100007313 KEGG:dre:100007313
NextBio:20787456 Uniprot:E7F1G8
Length = 483
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 144/371 (38%), Positives = 227/371 (61%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L
Sbjct: 88 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 147
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILSAG 158
+++D + QA+VL PTRELA Q+ ++ + ++G +KV A GGT++R+D L
Sbjct: 148 ERIDLKKDYIQAIVLVPTRELALQVSQISINMSKHLGGIKVMATTGGTNLRDDIMRLDEI 207
Query: 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGV 218
VHV++ TPGR+ D++++ + D ++M V+DEAD++LS+ F I DI LP K Q+ +
Sbjct: 208 VHVIIATPGRILDLIKKGVAKVDKVQMAVMDEADKLLSQDFVVLIEDIISFLPKKRQILL 267
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLA 278
+SAT P + K + KP I + DELTL+GI Q++ V + + K+ L L+ L
Sbjct: 268 YSATFPISVQKFMTKHLQKPYEINLM-DELTLKGITQYYAYVTERQ-KVHCLNTLFSRLQ 325
Query: 279 ITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL 338
I QS+IF N+ ++V+ L ++ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 326 INQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDL 385
Query: 339 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFY 398
RGID+Q V++VIN+D P E YLHRIGRSGR+G G+AIN +T +D L I+
Sbjct: 386 FTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLITSEDRFNLKGIEDQL 445
Query: 399 NVVIEELPANV 409
I+ +P+++
Sbjct: 446 MTDIKPIPSSI 456
>POMBASE|SPBC776.09 [details] [associations]
symbol:ste13 "ATP-dependent RNA helicase Ste13"
species:4896 "Schizosaccharomyces pombe" [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0030996 "cell cycle arrest in response to
nitrogen starvation" evidence=IMP] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IMP] [GO:0051028
"mRNA transport" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC776.09
GO:GO:0005524 GO:GO:0006417 EMBL:CU329671 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0031142 eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000290
OrthoDB:EOG4QJVWF EMBL:D29795 PIR:S46654 RefSeq:NP_596324.1
ProteinModelPortal:Q09181 SMR:Q09181 STRING:Q09181 PRIDE:Q09181
EnsemblFungi:SPBC776.09.1 GeneID:2541216 KEGG:spo:SPBC776.09
NextBio:20802328 GO:GO:0030996 Uniprot:Q09181
Length = 485
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 148/368 (40%), Positives = 219/368 (59%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F+ LK LL GI+ GFE+PS IQ+ I G D++ +A++GTGKTA F L++
Sbjct: 46 FEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEK 105
Query: 102 LDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHV 161
+D + + Q L+L PTRELA Q +V + LG +M VKV GGT++R+D L+ VH+
Sbjct: 106 VDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTLRDDIIRLNDTVHI 165
Query: 162 VVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSA 221
VVGTPGRV D+ + FV+DEAD++LS F I + + P Q+ ++SA
Sbjct: 166 VVGTPGRVLDLAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLYSA 225
Query: 222 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQ 281
T P K +NKP I + DELTL G+ Q++ VD+ + K+ L L+ L I Q
Sbjct: 226 TFPLIVKNFMDKHLNKPYEINLM-DELTLRGVTQYYAFVDESQ-KVHCLNTLFSKLQINQ 283
Query: 282 SVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLAR 341
S+IF N+ +V+ L ++ ++ +H M Q+ R+ + FR+G R L+ +DLL R
Sbjct: 284 SIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVFHNFRNGVCRNLVCSDLLTR 343
Query: 342 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVV 401
GID+Q V++VIN+D P E YLHRIGRSGRFG +G+AI+F++ D L I+
Sbjct: 344 GIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHRGLAISFISWADRFNLYRIENELGTE 403
Query: 402 IEELPANV 409
I+ +P ++
Sbjct: 404 IQPIPPSI 411
>WB|WBGene00000479 [details] [associations]
symbol:cgh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0051729 "germline cell cycle switching, mitotic
to meiotic cell cycle" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0010467 "gene expression" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0017148 "negative regulation of translation"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 142/368 (38%), Positives = 222/368 (60%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F+ L +LL GI+ G+EKPS IQ+ I G D++ +A++GTGKT +C ++++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 102 LDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHV 161
+ QA+V+ PTRELA Q ++ L ++ +KV GGT +R+D L+ VH+
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHL 164
Query: 162 VVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSA 221
V+ TPGR+ D++ + + ++ + VLDEAD++LS+ F+ + + LP + QV ++SA
Sbjct: 165 VIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSA 224
Query: 222 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQ 281
T P +K M+KP I + +ELTL G+ Q++ V +E+ K+ L L+ L I Q
Sbjct: 225 TFPNTVTSFMQKHMHKPYEINLM-EELTLLGVTQYYAFV-QEKQKVHCLNTLFRKLQINQ 282
Query: 282 SVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLAR 341
S+IF N+ ++V+ L ++ ++ H M QN R+ + +FR G+ R L+ +DLL R
Sbjct: 283 SIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTR 342
Query: 342 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVV 401
GID+Q V++VIN+D P E YLHRIGRSGRFG GVAIN +T +D L I++
Sbjct: 343 GIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQELRTR 402
Query: 402 IEELPANV 409
IE +P V
Sbjct: 403 IEPIPKTV 410
>UNIPROTKB|Q95YF3 [details] [associations]
symbol:cgh-1 "ATP-dependent RNA helicase cgh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 142/368 (38%), Positives = 222/368 (60%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F+ L +LL GI+ G+EKPS IQ+ I G D++ +A++GTGKT +C ++++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 102 LDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHV 161
+ QA+V+ PTRELA Q ++ L ++ +KV GGT +R+D L+ VH+
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHL 164
Query: 162 VVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSA 221
V+ TPGR+ D++ + + ++ + VLDEAD++LS+ F+ + + LP + QV ++SA
Sbjct: 165 VIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSA 224
Query: 222 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQ 281
T P +K M+KP I + +ELTL G+ Q++ V +E+ K+ L L+ L I Q
Sbjct: 225 TFPNTVTSFMQKHMHKPYEINLM-EELTLLGVTQYYAFV-QEKQKVHCLNTLFRKLQINQ 282
Query: 282 SVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLAR 341
S+IF N+ ++V+ L ++ ++ H M QN R+ + +FR G+ R L+ +DLL R
Sbjct: 283 SIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTR 342
Query: 342 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVV 401
GID+Q V++VIN+D P E YLHRIGRSGRFG GVAIN +T +D L I++
Sbjct: 343 GIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQELRTR 402
Query: 402 IEELPANV 409
IE +P V
Sbjct: 403 IEPIPKTV 410
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 152/384 (39%), Positives = 222/384 (57%)
Query: 33 VSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
+S DE +F +GL ENLLR + G+EKP+ IQ I P G D++ QAQ+GTGKT
Sbjct: 1 MSSDE--RTFRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTG 58
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F +L ++ ++ Q LVLAPTRELA Q+ + + +M V GG S+++
Sbjct: 59 AFALPLLNKVTSQTTP-QILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQ 117
Query: 152 QRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLP 211
L G V+VGTPGRV D +RR +L+ + ++ VLDEADEML GF D I I +H P
Sbjct: 118 LNALKRGPQVIVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMGFIDDIEWILEHTP 177
Query: 212 GKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLC 271
+ Q+ +FSATMP + + K + I + T++ I+Q V V + KL+ L
Sbjct: 178 PQRQLALFSATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQVSQHN-KLEALV 236
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSR 331
+ E +IFV TR L +++ +R + S HGDM+Q +R+ + + ++G
Sbjct: 237 RVLEVENTEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKNGKLD 296
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRML 391
+LI TD+ ARG+DV+++ V+NYD+P E Y+HRIGR+GR GR G+AI FVT + RML
Sbjct: 297 ILIATDVAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRML 356
Query: 392 ADIQRFYNVVIEEL----PANVAD 411
I+R N I + P VA+
Sbjct: 357 RTIERATNSRISPMKVPSPETVAE 380
>SGD|S000005572 [details] [associations]
symbol:DBP5 "Cytoplasmic ATP-dependent RNA helicase of the
DEAD-box family" species:4932 "Saccharomyces cerevisiae"
[GO:0044614 "nuclear pore cytoplasmic filaments" evidence=IDA]
[GO:0005934 "cellular bud tip" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IEA;IPI] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=IGI;IMP] [GO:0003724 "RNA helicase
activity" evidence=ISS;IDA] [GO:0005844 "polysome" evidence=IDA]
[GO:0006415 "translational termination" evidence=IGI;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000822 "inositol hexakisphosphate
binding" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000005572 GO:GO:0005524
GO:GO:0005737 EMBL:BK006948 GO:GO:0005934 GO:GO:0015031
GO:GO:0031965 GO:GO:0003723 GO:GO:0006406 GO:GO:0005844
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
EMBL:U28135 EMBL:Z74954 EMBL:Z74955 PIR:S66920 RefSeq:NP_014689.1
PDB:2KBE PDB:2KBF PDB:3GFP PDB:3PEU PDB:3PEV PDB:3PEW PDB:3PEY
PDB:3RRM PDB:3RRN PDBsum:2KBE PDBsum:2KBF PDBsum:3GFP PDBsum:3PEU
PDBsum:3PEV PDBsum:3PEW PDBsum:3PEY PDBsum:3RRM PDBsum:3RRN
ProteinModelPortal:P20449 SMR:P20449 DIP:DIP-2352N IntAct:P20449
MINT:MINT-488024 STRING:P20449 PaxDb:P20449 PeptideAtlas:P20449
EnsemblFungi:YOR046C GeneID:854211 KEGG:sce:YOR046C CYGD:YOR046c
GeneTree:ENSGT00530000063236 EvolutionaryTrace:P20449
NextBio:976065 Genevestigator:P20449 GermOnline:YOR046C
GO:GO:0044614 GO:GO:0008186 GO:GO:0006415 Uniprot:P20449
Length = 482
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 150/379 (39%), Positives = 235/379 (62%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGI 98
SFD +GL LL+GIYA F+KPS IQ+R + ++I Q+QSGTGKTA F +
Sbjct: 93 SFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTM 152
Query: 99 LQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAG 158
L +++ E QA+ LAP+RELA+Q +V++ +G + + V S ++++I
Sbjct: 153 LTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTKITSQLIVPD-SFEKNKQI---N 208
Query: 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQHLPGKIQVG 217
V+VGTPG V D++RR+ ++ I++FVLDEAD ML + G DQ + + LP Q+
Sbjct: 209 AQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQLV 268
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
+FSAT + +K + + ++ +E+ ++ IKQ +++ E K D L +LY +
Sbjct: 269 LFSATFADAVRQYAKKIVPNANTLELQTNEVNVDAIKQLYMDCKNEADKFDVLTELYGLM 328
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
I S+IFV T++ + L +++S H VS HGD+ RD ++ +FR G S+VLITT+
Sbjct: 329 TIGSSIIFVATKKTANVLYGKLKSEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITTN 388
Query: 338 LLARGIDVQQVSLVINYDLPT------QPENYLHRIGRSGRFGRKGVAINFV-TRDDDRM 390
+LARGID+ VS+V+NYDLPT P Y+HRIGR+GRFGRKGVAI+FV ++ +
Sbjct: 389 VLARGIDIPTVSMVVNYDLPTLANGQADPATYIHRIGRTGRFGRKGVAISFVHDKNSFNI 448
Query: 391 LADIQRFY-NVVIEELPAN 408
L+ IQ+++ ++ + +P +
Sbjct: 449 LSAIQKYFGDIEMTRVPTD 467
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 140/371 (37%), Positives = 220/371 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F L +L + I GFE+ + IQ + I DVI QAQ+GTGKTA F +++
Sbjct: 4 TFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVH 160
+++ ES QA+V+APTRELA Q+ + + +G +V GG + R L H
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKKNPH 123
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
++VGTPGR+ D + R+++R + VLDEADEML+ GF + I I ++P + Q +FS
Sbjct: 124 IIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQTLLFS 183
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
ATMP I +FM P + VK E+T+ I+QF++ V + + K DTL L + +
Sbjct: 184 ATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERK-KFDTLTRLLDIQSPE 242
Query: 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLA 340
+++F T+R+VD LT+ + R +T HGD+ Q R + +R+F+ G+ VL+ TD+ A
Sbjct: 243 LAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAA 302
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNV 400
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+ G+A+ F+T + ML I++
Sbjct: 303 RGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAIEQTTKR 362
Query: 401 VIEELPANVAD 411
++ + A D
Sbjct: 363 KMDRMKAPTLD 373
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 137/356 (38%), Positives = 216/356 (60%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F L +L++ I GFE+ + IQ + I DVI QAQ+GTGKTA F +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVH 160
+++ ES QA+V+APTRELA Q+ + + +G KV GG + R L +
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPN 123
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
++VGTPGR+ D + R+++R + + V+DEADEML+ GF D I I ++P + Q +FS
Sbjct: 124 IIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFS 183
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
ATMP I +FM +P + VK E+T+ I+QF++ V +E K DTL L + +
Sbjct: 184 ATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEV-QERKKFDTLTRLLDIQSPE 242
Query: 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLA 340
+++F T+R+VD L + + R + HGD+ Q R + +R+F+ G+ VL+ TD+ A
Sbjct: 243 LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAA 302
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQR 396
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+ G+A+ F+T + ML I++
Sbjct: 303 RGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQ 358
>ASPGD|ASPL0000036135 [details] [associations]
symbol:AN10417 species:162425 "Emericella nidulans"
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0030996 "cell
cycle arrest in response to nitrogen starvation" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IEA]
[GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:BN001306 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:HIDPARF
EnsemblFungi:CADANIAT00009573 Uniprot:C8VHA5
Length = 498
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 146/368 (39%), Positives = 215/368 (58%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F+ +K L+ GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++
Sbjct: 41 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 100
Query: 102 LDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHV 161
++ +S + QAL+L PTRELA Q V + LG ++G+ V GGT + +D L+ VH+
Sbjct: 101 INPKSTKTQALILVPTRELALQTSHVCKTLGKHLGINVMVTTGGTGLMDDIIRLNDAVHI 160
Query: 162 VVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSA 221
+VGTPGRV D+ + FV+DEAD++LS F I + P QV +FSA
Sbjct: 161 LVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSPEFTPVIEQLLSFHPKDRQVMLFSA 220
Query: 222 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQ 281
T P + M P I + DELTL GI Q++ V++++ K+ L L+ L I Q
Sbjct: 221 TFPMIVKSFKDRHMRNPYEINLM-DELTLRGITQYYAFVEEKQ-KVHCLNTLFSKLQINQ 278
Query: 282 SVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLAR 341
S+IF N+ +V+ L ++ ++ +H M Q R+ + +FR+G R L+ +DLL R
Sbjct: 279 SIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTR 338
Query: 342 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVV 401
GID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN + DD L I++
Sbjct: 339 GIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYKIEQELGTE 398
Query: 402 IEELPANV 409
I+ +P N+
Sbjct: 399 IQPIPQNI 406
>DICTYBASE|DDB_G0291804 [details] [associations]
symbol:ddx6 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0291804 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006397 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000185 RefSeq:XP_629938.1 HSSP:P39517
ProteinModelPortal:Q54E49 SMR:Q54E49 PRIDE:Q54E49
EnsemblProtists:DDB0234196 GeneID:8628344 KEGG:ddi:DDB_G0291804
OMA:QFMEKHL ProtClustDB:CLSZ2429504 Uniprot:Q54E49
Length = 423
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 141/367 (38%), Positives = 220/367 (59%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ FD + LK +LLRGI+ G+ KPS IQ++ I G D++ +A++GTGKTA+F L
Sbjct: 49 NDFDDLHLKRDLLRGIFEKGYVKPSPIQEKAIPIALAGRDIMARAKNGTGKTASFLIPAL 108
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159
++ D Q L+L PTRELA Q +V + LG YM V+V A GGTS+++D L V
Sbjct: 109 EKTDPTKDVIQVLILVPTRELALQTSQVCKELGKYMNVQVMASTGGTSLKDDIMRLYNPV 168
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
H++V TPGRV D+ ++ ++DEAD++LS+ F+ + + LP + Q+ +F
Sbjct: 169 HILVATPGRVLDLAQKNVANLSNCHTMIMDEADKLLSQEFQPLVEQLINFLPQQRQILLF 228
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAI 279
SAT P ++ + I + +ELTL+G+ Q++ V++ + K+ L L+ L I
Sbjct: 229 SATFPVTVKSFKEHYLQQAFEINLM-EELTLKGVTQYYAFVEERQ-KIHCLNTLFSKLQI 286
Query: 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLL 339
QS+IF N+ +V+ L ++ ++ H M Q R+ + +FR+G+ R L+++DL
Sbjct: 287 NQSIIFCNSVNRVELLAKKITELGYSCFFIHAKMVQAHRNRVFHDFRNGACRNLVSSDLF 346
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYN 399
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T +D L I++
Sbjct: 347 TRGIDIQDVNVVINFDFPKHSETYLHRIGRSGRFGHLGLAINLITYEDRFSLYKIEQELG 406
Query: 400 VVIEELP 406
I+ +P
Sbjct: 407 TEIKPIP 413
>ZFIN|ZDB-GENE-070912-83 [details] [associations]
symbol:ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
6" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-070912-83 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 InterPro:IPR014014 PROSITE:PS51195
EMBL:CR759774 IPI:IPI00505165 ProteinModelPortal:E7FD91
Ensembl:ENSDART00000087382 Bgee:E7FD91 Uniprot:E7FD91
Length = 485
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 142/373 (38%), Positives = 226/373 (60%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L
Sbjct: 97 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 156
Query: 100 QQLDY--ESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILS 156
+++D +S+Q A+V+ PTRELA Q+ ++ + +MG VKV A GGT++R+D L
Sbjct: 157 ERIDLKKDSIQA-AVVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLD 215
Query: 157 AGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQV 216
VHVV+ TPGR+ D++++ + ++M VLDEAD++LS+ F + +I L + Q+
Sbjct: 216 ETVHVVIATPGRILDLIKKGVAKVGQVQMIVLDEADKLLSQDFVQMMEEILSSLSKQRQI 275
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYET 276
++SAT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+
Sbjct: 276 LLYSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSR 333
Query: 277 LAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITT 336
L I QS+IF N+ ++V+ L ++ ++ H M Q R+ + +FR+G R L+ T
Sbjct: 334 LQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCT 393
Query: 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQR 396
DL RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I+
Sbjct: 394 DLFTRGIDIQAVNVVINFDFPKLGETYLHRIGRSGRFGHLGLAINLITYDDRFNLKGIEE 453
Query: 397 FYNVVIEELPANV 409
I+ +P+++
Sbjct: 454 QLGTEIKPIPSSI 466
>UNIPROTKB|F1S432 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:HETIFEV
EMBL:CU929739 Ensembl:ENSSSCT00000003016 Uniprot:F1S432
Length = 481
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 154/386 (39%), Positives = 229/386 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
SF+ + LK LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 95 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVLA 153
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD-YMGVKVHACVGGTSVREDQRILS 156
+L Q++ + Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I
Sbjct: 154 MLSQVEPANRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE 213
Query: 157 AGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKI 214
H+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I + LP
Sbjct: 214 ---HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 270
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + + K LC+LY
Sbjct: 271 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCNLY 330
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 331 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLV 390
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 387
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 391 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 450
Query: 388 DRMLADIQRFYNVVIEELPANVADLI 413
+L IQ +N IE L + D I
Sbjct: 451 MNILNRIQEHFNKKIERLDTDDLDEI 476
>UNIPROTKB|F1MUT6 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 EMBL:DAAA02045970
IPI:IPI00704706 UniGene:Bt.37736 Ensembl:ENSBTAT00000004644
OMA:KMSMNIL Uniprot:F1MUT6
Length = 484
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 153/386 (39%), Positives = 229/386 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
SF+ + LK LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 98 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVLA 156
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD-YMGVKVHACVGGTSVREDQRILS 156
+L Q++ + Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I
Sbjct: 157 MLSQVEPANRHPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE 216
Query: 157 AGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKI 214
H+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I + LP
Sbjct: 217 ---HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 273
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + + K LC++Y
Sbjct: 274 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALCNIY 333
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 334 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLV 393
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 387
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 394 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 453
Query: 388 DRMLADIQRFYNVVIEELPANVADLI 413
+L IQ +N IE L + D I
Sbjct: 454 MNILNRIQEHFNKKIERLDTDDLDEI 479
>POMBASE|SPBC12C2.06 [details] [associations]
symbol:SPBC12C2.06 "cytoplasmic ATP-dependent RNA
helicase Dbp5 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0002184 "cytoplasmic translational termination" evidence=NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006415 "translational
termination" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC12C2.06 GO:GO:0005829 GO:GO:0005524
GO:GO:0005635 GO:GO:0015031 EMBL:CU329671 GO:GO:0031965
GO:GO:0005643 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0006406
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
PIR:T39375 RefSeq:NP_596016.1 PDB:3FHO PDBsum:3FHO
ProteinModelPortal:Q09747 STRING:Q09747 PRIDE:Q09747
EnsemblFungi:SPBC12C2.06.1 GeneID:2539975 KEGG:spo:SPBC12C2.06
EvolutionaryTrace:Q09747 NextBio:20801118 GO:GO:0002184
Uniprot:Q09747
Length = 503
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 155/379 (40%), Positives = 228/379 (60%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGI 98
SF+ + LK LL+GIY+ F+KPS IQ++ + ++I Q+QSGTGKTA F +
Sbjct: 115 SFEELELKPELLKGIYSMKFQKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFALTM 174
Query: 99 LQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAG 158
L ++D + QA+ LAP+RELA+QI V+ +G Y VK + SV + +I
Sbjct: 175 LSRVDASVPKPQAICLAPSRELARQIMDVVTEMGKYTEVKTAFGIKD-SVPKGAKI---D 230
Query: 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQHLPGKIQVG 217
+V+GTPG V D+++R+ L I++FVLDEAD ML + G DQ I LP Q+
Sbjct: 231 AQIVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIV 290
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
+FSAT + +F I +K +EL++EGIKQ +++ EE K + L +LY L
Sbjct: 291 LFSATFSERVEKYAERFAPNANEIRLKTEELSVEGIKQLYMDCQSEEHKYNVLVELYGLL 350
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
I QS+IF + + + +M + HTV+ G+++ RD IM FR G+S+VL+TT+
Sbjct: 351 TIGQSIIFCKKKDTAEEIARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTN 410
Query: 338 LLARGIDVQQVSLVINYDLPTQ------PENYLHRIGRSGRFGRKGVAINFV--TRDDDR 389
++ARGIDV QV+LV+NYD+P P+ YLHRIGR+GRFGR GV+INFV + +
Sbjct: 411 VIARGIDVSQVNLVVNYDMPLDQAGRPDPQTYLHRIGRTGRFGRVGVSINFVHDKKSWEE 470
Query: 390 MLADIQRFYNVVIEELPAN 408
M A IQ ++ I +P +
Sbjct: 471 MNA-IQEYFQRPITRVPTD 488
>RGD|1303136 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEP] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524 GO:GO:0006917
GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 152/386 (39%), Positives = 228/386 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
SF+ + LK LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILS 156
+L +++ Q L L+PT ELA Q KV+ +G + +K+ V G + Q++
Sbjct: 151 MLSRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKV-- 208
Query: 157 AGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKI 214
G +V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I + LP
Sbjct: 209 -GEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + E K LC+LY
Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLY 327
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 387
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 387
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
Query: 388 DRMLADIQRFYNVVIEELPANVADLI 413
+L IQ +N IE L + D I
Sbjct: 448 MNILNRIQEHFNKKIERLDTDDLDEI 473
>RGD|1593382 [details] [associations]
symbol:Ddx19b "DEAD (Asp-Glu-Ala-As) box polypeptide 19B"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524
GO:GO:0006917 GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 152/386 (39%), Positives = 228/386 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
SF+ + LK LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILS 156
+L +++ Q L L+PT ELA Q KV+ +G + +K+ V G + Q++
Sbjct: 151 MLSRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKV-- 208
Query: 157 AGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKI 214
G +V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I + LP
Sbjct: 209 -GEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + E K LC+LY
Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLY 327
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 387
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 387
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
Query: 388 DRMLADIQRFYNVVIEELPANVADLI 413
+L IQ +N IE L + D I
Sbjct: 448 MNILNRIQEHFNKKIERLDTDDLDEI 473
>UNIPROTKB|E9PTL9 [details] [associations]
symbol:Ddx19b "Protein Ddx19b" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1593382 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00959699
Ensembl:ENSRNOT00000059034 ArrayExpress:E9PTL9 Uniprot:E9PTL9
Length = 482
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 152/386 (39%), Positives = 228/386 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
SF+ + LK LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 96 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVLA 154
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILS 156
+L +++ Q L L+PT ELA Q KV+ +G + +K+ V G + Q++
Sbjct: 155 MLSRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKV-- 212
Query: 157 AGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKI 214
G +V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I + LP
Sbjct: 213 -GEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 271
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + E K LC+LY
Sbjct: 272 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLY 331
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 332 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 391
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 387
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 392 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 451
Query: 388 DRMLADIQRFYNVVIEELPANVADLI 413
+L IQ +N IE L + D I
Sbjct: 452 MNILNRIQEHFNKKIERLDTDDLDEI 477
>UNIPROTKB|E2RR50 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
EMBL:AAEX03004077 RefSeq:XP_536790.2 ProteinModelPortal:E2RR50
Ensembl:ENSCAFT00000032061 GeneID:479658 KEGG:cfa:479658
NextBio:20854805 Uniprot:E2RR50
Length = 478
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 152/386 (39%), Positives = 228/386 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
SF+ + LK LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILS 156
+L +++ Q L L+PT ELA Q KV+ +G + +K+ V G + Q+I
Sbjct: 151 MLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISE 210
Query: 157 AGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKI 214
H+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I + LP
Sbjct: 211 ---HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKNC 267
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + + K LC+LY
Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCNLY 327
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 387
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 387
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
Query: 388 DRMLADIQRFYNVVIEELPANVADLI 413
+L IQ +N IE L + D I
Sbjct: 448 MNILNRIQEHFNKKIERLDTDDLDEI 473
>UNIPROTKB|H3BQK0 [details] [associations]
symbol:DDX19B "HCG1998531, isoform CRA_g" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:CH471241 EMBL:AC012184 HGNC:HGNC:2742
ChiTaRS:DDX19B SMR:H3BQK0 Ensembl:ENST00000563206 Uniprot:H3BQK0
Length = 484
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 153/386 (39%), Positives = 227/386 (58%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
SF+ + LK LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 98 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVLA 156
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD-YMGVKVHACVGGTSVREDQRILS 156
+L Q++ + Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I
Sbjct: 157 MLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE 216
Query: 157 AGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKI 214
+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I + LP
Sbjct: 217 ---QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 273
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + K LC+LY
Sbjct: 274 QMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLY 333
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 334 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 393
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 387
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 394 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 453
Query: 388 DRMLADIQRFYNVVIEELPANVADLI 413
+L IQ +N IE L + D I
Sbjct: 454 MNILNRIQEHFNKKIERLDTDDLDEI 479
>UNIPROTKB|Q9UMR2 [details] [associations]
symbol:DDX19B "ATP-dependent RNA helicase DDX19B"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0006406 "mRNA export from nucleus" evidence=TAS]
[GO:0005635 "nuclear envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0004386
GO:GO:0006406 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
OrthoDB:EOG46MBJK EMBL:CH471241 EMBL:AJ237946 EMBL:AF353720
EMBL:AL136639 EMBL:CR457215 EMBL:CR533509 EMBL:AK027378
EMBL:AK301938 EMBL:AK302107 EMBL:AK316346 EMBL:AC012184
EMBL:BC003626 EMBL:BC010008 IPI:IPI00008943 IPI:IPI00027599
IPI:IPI00556368 IPI:IPI00939593 RefSeq:NP_001014449.1
RefSeq:NP_001014451.1 RefSeq:NP_001244101.1 RefSeq:NP_001244102.1
RefSeq:NP_001244103.1 RefSeq:NP_009173.1 UniGene:Hs.221761 PDB:3EWS
PDB:3FHC PDB:3FHT PDB:3FMO PDB:3FMP PDB:3G0H PDBsum:3EWS
PDBsum:3FHC PDBsum:3FHT PDBsum:3FMO PDBsum:3FMP PDBsum:3G0H
ProteinModelPortal:Q9UMR2 SMR:Q9UMR2 DIP:DIP-48486N IntAct:Q9UMR2
MINT:MINT-1387516 STRING:Q9UMR2 PhosphoSite:Q9UMR2 DMDM:10719979
PaxDb:Q9UMR2 PRIDE:Q9UMR2 DNASU:11269 Ensembl:ENST00000288071
Ensembl:ENST00000355992 Ensembl:ENST00000393657
Ensembl:ENST00000451014 Ensembl:ENST00000563392
Ensembl:ENST00000568625 GeneID:11269 KEGG:hsa:11269 UCSC:uc002eyo.3
UCSC:uc002eyp.3 CTD:11269 GeneCards:GC16P070328 HGNC:HGNC:2742
HPA:CAB037284 MIM:605812 neXtProt:NX_Q9UMR2 PharmGKB:PA27208
InParanoid:Q9UMR2 OMA:HETIFEV PhylomeDB:Q9UMR2 ChiTaRS:DDX19B
EvolutionaryTrace:Q9UMR2 GenomeRNAi:11269 NextBio:42879
ArrayExpress:Q9UMR2 Bgee:Q9UMR2 CleanEx:HS_DDX19B
Genevestigator:Q9UMR2 GermOnline:ENSG00000157349 Uniprot:Q9UMR2
Length = 479
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 153/386 (39%), Positives = 227/386 (58%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
SF+ + LK LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 93 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVLA 151
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD-YMGVKVHACVGGTSVREDQRILS 156
+L Q++ + Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I
Sbjct: 152 MLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE 211
Query: 157 AGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKI 214
+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I + LP
Sbjct: 212 ---QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 268
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + K LC+LY
Sbjct: 269 QMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLY 328
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 329 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 388
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 387
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 389 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 448
Query: 388 DRMLADIQRFYNVVIEELPANVADLI 413
+L IQ +N IE L + D I
Sbjct: 449 MNILNRIQEHFNKKIERLDTDDLDEI 474
>UNIPROTKB|I3LC00 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236
EMBL:CU929739 RefSeq:XP_003126917.1 Ensembl:ENSSSCT00000029799
GeneID:100524144 KEGG:ssc:100524144 Uniprot:I3LC00
Length = 478
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 152/386 (39%), Positives = 228/386 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
SF+ + LK LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILS 156
+L +++ Q L L+PT ELA Q KV+ +G + +K+ V G + Q+I
Sbjct: 151 MLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISE 210
Query: 157 AGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKI 214
H+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I + LP
Sbjct: 211 ---HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + + K LC+LY
Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCNLY 327
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLV 387
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 387
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
Query: 388 DRMLADIQRFYNVVIEELPANVADLI 413
+L IQ +N IE L + D I
Sbjct: 448 MNILNRIQEHFNKKIERLDTDDLDEI 473
>MGI|MGI:1353582 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 25"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006200 "ATP catabolic process"
evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IDA]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1353582 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:29118
OrthoDB:EOG4NS3BD OMA:WHFAERI ChiTaRS:DDX25 EMBL:AF142630
EMBL:AY380091 EMBL:AY380080 EMBL:AY380081 EMBL:AY380082
EMBL:AY380083 EMBL:AY380084 EMBL:AY380085 EMBL:AY380086
EMBL:AY380087 EMBL:AY380088 EMBL:AY380089 EMBL:AY380090
EMBL:AK050693 EMBL:AK078340 EMBL:BC024852 EMBL:BC061130
IPI:IPI00135420 IPI:IPI00759935 RefSeq:NP_038960.2
UniGene:Mm.291723 ProteinModelPortal:Q9QY15 SMR:Q9QY15
STRING:Q9QY15 PhosphoSite:Q9QY15 PaxDb:Q9QY15 PRIDE:Q9QY15
Ensembl:ENSMUST00000034612 GeneID:30959 KEGG:mmu:30959
UCSC:uc012gqi.1 InParanoid:Q9QY15 NextBio:307448 Bgee:Q9QY15
CleanEx:MM_DDX25 Genevestigator:Q9QY15
GermOnline:ENSMUSG00000032101 Uniprot:Q9QY15
Length = 484
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 150/385 (38%), Positives = 230/385 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
+F+ + LKE LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 99 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 157
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDY-MGVKVHACVGGTSVREDQRILS 156
+L +++ L Q L LAPT ELA Q +V+ +G + + V+V + G + +
Sbjct: 158 MLSRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTEVTK 217
Query: 157 AGVHVVVGTPGRVFDM-LRRQSLRPDYIRMFVLDEADEML-SRGFKDQIYDIFQHLPGKI 214
+++GTPG V D +R+ + IR+FVLDEAD M+ ++GF DQ I + LP +
Sbjct: 218 ---QIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSEC 274
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + + + P I ++++ELTL I+Q++V + + K LC++Y
Sbjct: 275 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCENRKGKYQALCNIY 334
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF TRR WLT +M H VS G++ R I++ FR G +VLI
Sbjct: 335 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLI 394
Query: 335 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDD 388
TT++ ARGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D
Sbjct: 395 TTNVCARGIDVKQVTIVVNFDLPVNQSEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKL 454
Query: 389 RMLADIQRFYNVVIEEL-PANVADL 412
+L IQ +N I++L P ++ ++
Sbjct: 455 PLLMKIQDHFNSNIKQLDPEDMDEI 479
>ZFIN|ZDB-GENE-040426-1259 [details] [associations]
symbol:ddx39b "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39B" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-1259 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX511233
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 KO:K12812
OMA:NNPLINC EMBL:FP085397 EMBL:BC055240 IPI:IPI00502330
RefSeq:NP_957237.1 UniGene:Dr.5423 SMR:Q7SXU7 STRING:Q7SXU7
Ensembl:ENSDART00000052355 GeneID:393917 KEGG:dre:393917 CTD:393917
InParanoid:Q7SXU7 NextBio:20814893 Uniprot:Q7SXU7
Length = 435
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 152/382 (39%), Positives = 222/382 (58%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+DV+ QA+SG GKTA
Sbjct: 45 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 104
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQL+ + Q LV+ TRELA QI K YM VKV GG S+++D
Sbjct: 105 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKD 164
Query: 152 QRILSA-GVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L HVVVGTPGR+ + R +SL +I+ F+LDE D+ML + + + +IF+
Sbjct: 165 EEVLKKESPHVVVGTPGRILALSRNKSLNLRHIKHFILDECDKMLEQLDMRRDVQEIFRM 224
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + QV +FSAT+ E + RKFM P+ I V + +LTL G++Q++V + K+ K
Sbjct: 225 TPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKL-KDNEKNR 283
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + ++ L + ++ A H M Q+ R ++F+
Sbjct: 284 KLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRAMPQDERLARYQQFKDF 343
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ T+L RG+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ ++D
Sbjct: 344 QRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 403
Query: 389 -RMLADIQRFYNVVIEELPANV 409
R L D+Q + V I ELP +
Sbjct: 404 ARTLNDVQDRFEVNISELPEEI 425
>UNIPROTKB|Q3T147 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9913 "Bos taurus" [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046784 "intronless viral mRNA export
from host nucleus" evidence=IEA] [GO:0043008 "ATP-dependent protein
binding" evidence=IEA] [GO:0030621 "U4 snRNA binding" evidence=IEA]
[GO:0017070 "U6 snRNA binding" evidence=IEA] [GO:0010501 "RNA
secondary structure unwinding" evidence=IEA] [GO:0005688 "U6 snRNP"
evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 GO:GO:0006406 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000245
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0010501 GO:GO:0017070 HSSP:Q5STU4 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 EMBL:BC102131
IPI:IPI00690141 RefSeq:NP_001028801.1 UniGene:Bt.4945
ProteinModelPortal:Q3T147 SMR:Q3T147 STRING:Q3T147 PRIDE:Q3T147
Ensembl:ENSBTAT00000029090 GeneID:540191 KEGG:bta:540191 CTD:7919
InParanoid:Q3T147 KO:K12812 OMA:NAENPAI NextBio:20878478
ArrayExpress:Q3T147 GO:GO:0000346 GO:GO:0005687 GO:GO:0005688
GO:GO:0030621 GO:GO:0046784 Uniprot:Q3T147
Length = 428
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 150/382 (39%), Positives = 222/382 (58%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+DV+ QA+SG GKTA
Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQL+ + Q LV+ TRELA QI K YM VKV GG S+++D
Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKD 157
Query: 152 QRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L H+VVGTPGR+ + R +SL +I+ F+LDE D+ML + + + +IF+
Sbjct: 158 EEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRM 217
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + QV +FSAT+ E + RKFM P+ I V + +LTL G++Q++V + K+ K
Sbjct: 218 TPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKL-KDNEKNR 276
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + ++ L + ++ A H M Q R ++F+
Sbjct: 277 KLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDF 336
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ T+L RG+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ ++D
Sbjct: 337 QRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396
Query: 389 -RMLADIQRFYNVVIEELPANV 409
++L D+Q + V I ELP +
Sbjct: 397 AKILNDVQDRFEVNISELPDEI 418
>UNIPROTKB|Q3ZBV2 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9913 "Bos taurus" [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 EMBL:BC103093 IPI:IPI00788586
RefSeq:NP_001029743.1 UniGene:Bt.49612 HSSP:Q9UHL0
ProteinModelPortal:Q3ZBV2 SMR:Q3ZBV2 PRIDE:Q3ZBV2
Ensembl:ENSBTAT00000004645 GeneID:529929 KEGG:bta:529929 CTD:55308
HOVERGEN:HBG107989 InParanoid:Q3ZBV2 OMA:MMAINTI OrthoDB:EOG46MBJK
NextBio:20875139 ArrayExpress:Q3ZBV2 Uniprot:Q3ZBV2
Length = 478
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 151/386 (39%), Positives = 228/386 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
SF+ + LK LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILS 156
+L +++ Q L L+PT ELA Q KV+ +G + +K+ V G + Q+I
Sbjct: 151 MLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISE 210
Query: 157 AGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKI 214
H+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I + LP
Sbjct: 211 ---HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + + K LC++Y
Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALCNIY 327
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLV 387
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 387
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
Query: 388 DRMLADIQRFYNVVIEELPANVADLI 413
+L IQ +N IE L + D I
Sbjct: 448 MNILNRIQEHFNKKIERLDTDDLDEI 473
>UNIPROTKB|Q5WR10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA]
[GO:0030621 "U4 snRNA binding" evidence=IEA] [GO:0017070 "U6 snRNA
binding" evidence=IEA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IEA] [GO:0005688 "U6 snRNP" evidence=IEA]
[GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:AY423389
RefSeq:NP_001014399.1 UniGene:Cfa.10131 ProteinModelPortal:Q5WR10
SMR:Q5WR10 Ensembl:ENSCAFT00000036511 GeneID:474839 KEGG:cfa:474839
InParanoid:Q5WR10 NextBio:20850784 Uniprot:Q5WR10
Length = 428
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 150/382 (39%), Positives = 222/382 (58%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+DV+ QA+SG GKTA
Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQL+ + Q LV+ TRELA QI K YM VKV GG S+++D
Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
Query: 152 QRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L H+VVGTPGR+ + R +SL +I+ F+LDE D+ML + + + +IF+
Sbjct: 158 EEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRM 217
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + QV +FSAT+ E + RKFM P+ I V + +LTL G++Q++V + K+ K
Sbjct: 218 TPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKL-KDNEKNR 276
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + ++ L + ++ A H M Q R ++F+
Sbjct: 277 KLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDF 336
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ T+L RG+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ ++D
Sbjct: 337 QRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396
Query: 389 -RMLADIQRFYNVVIEELPANV 409
++L D+Q + V I ELP +
Sbjct: 397 AKILNDVQDRFEVNISELPDEI 418
>UNIPROTKB|Q13838 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006406 "mRNA export from nucleus"
evidence=IGI;IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0000346 "transcription export complex"
evidence=IDA] [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008380 "RNA splicing" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0043008
"ATP-dependent protein binding" evidence=IDA] [GO:0005687 "U4
snRNP" evidence=IDA] [GO:0005688 "U6 snRNP" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 EMBL:BA000025 EMBL:CH471081
GO:GO:0016607 GO:GO:0005681 TCDB:3.A.18.1.1 EMBL:AL662847
EMBL:AL662801 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CleanEx:HS_BAT1 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX CTD:7919 KO:K12812
GO:GO:0000346 GO:GO:0030621 GO:GO:0046784 EMBL:Z37166 EMBL:BT009909
EMBL:AK222912 EMBL:AB088115 EMBL:AB103621 EMBL:AB202112
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 EMBL:BC000361 EMBL:BC013006 EMBL:AF029061
EMBL:AF029062 IPI:IPI00641829 IPI:IPI00848161 PIR:I37201
RefSeq:NP_004631.1 RefSeq:NP_542165.1 UniGene:Hs.254042
UniGene:Hs.730849 PDB:1T5I PDB:1T6N PDB:1XTI PDB:1XTJ PDB:1XTK
PDBsum:1T5I PDBsum:1T6N PDBsum:1XTI PDBsum:1XTJ PDBsum:1XTK
ProteinModelPortal:Q13838 SMR:Q13838 IntAct:Q13838
MINT:MINT-1032422 STRING:Q13838 PhosphoSite:Q13838 DMDM:2500529
PaxDb:Q13838 PRIDE:Q13838 DNASU:7919 Ensembl:ENST00000383508
Ensembl:ENST00000396172 Ensembl:ENST00000400295
Ensembl:ENST00000400296 Ensembl:ENST00000412106
Ensembl:ENST00000412330 Ensembl:ENST00000413678
Ensembl:ENST00000414440 Ensembl:ENST00000415689
Ensembl:ENST00000416863 Ensembl:ENST00000430784
Ensembl:ENST00000431360 Ensembl:ENST00000441425
Ensembl:ENST00000445218 Ensembl:ENST00000448296
Ensembl:ENST00000453138 Ensembl:ENST00000456476
Ensembl:ENST00000456666 Ensembl:ENST00000458640 GeneID:7919
KEGG:hsa:7919 UCSC:uc003ntt.3 GeneCards:GC06M031500 HGNC:HGNC:13917
HPA:CAB034012 MIM:142560 neXtProt:NX_Q13838 PharmGKB:PA25262
InParanoid:Q13838 PhylomeDB:Q13838 ChiTaRS:DDX39B
EvolutionaryTrace:Q13838 GenomeRNAi:7919 NextBio:30405
ArrayExpress:Q13838 Bgee:Q13838 Genevestigator:Q13838
GermOnline:ENSG00000198563 GO:GO:0043008 Uniprot:Q13838
Length = 428
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 150/382 (39%), Positives = 222/382 (58%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+DV+ QA+SG GKTA
Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQL+ + Q LV+ TRELA QI K YM VKV GG S+++D
Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
Query: 152 QRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L H+VVGTPGR+ + R +SL +I+ F+LDE D+ML + + + +IF+
Sbjct: 158 EEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRM 217
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + QV +FSAT+ E + RKFM P+ I V + +LTL G++Q++V + K+ K
Sbjct: 218 TPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKL-KDNEKNR 276
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + ++ L + ++ A H M Q R ++F+
Sbjct: 277 KLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDF 336
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ T+L RG+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ ++D
Sbjct: 337 QRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396
Query: 389 -RMLADIQRFYNVVIEELPANV 409
++L D+Q + V I ELP +
Sbjct: 397 AKILNDVQDRFEVNISELPDEI 418
>UNIPROTKB|Q29024 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784 "intronless viral
mRNA export from host nucleus" evidence=IEA] [GO:0043008
"ATP-dependent protein binding" evidence=IEA] [GO:0030621 "U4 snRNA
binding" evidence=IEA] [GO:0017070 "U6 snRNA binding" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0005688 "U6 snRNP" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000346 "transcription export complex" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0016607
GO:GO:0005681 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000245 GO:GO:0004004 EMBL:AJ251914 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:Z34846 PIR:I47126
RefSeq:NP_001005157.1 UniGene:Ssc.11719 ProteinModelPortal:Q29024
SMR:Q29024 STRING:Q29024 PRIDE:Q29024 Ensembl:ENSSSCT00000001529
GeneID:448813 KEGG:ssc:448813 ArrayExpress:Q29024 Uniprot:Q29024
Length = 428
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 150/382 (39%), Positives = 222/382 (58%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+DV+ QA+SG GKTA
Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQL+ + Q LV+ TRELA QI K YM VKV GG S+++D
Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
Query: 152 QRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L H+VVGTPGR+ + R +SL +I+ F+LDE D+ML + + + +IF+
Sbjct: 158 EEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRM 217
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + QV +FSAT+ E + RKFM P+ I V + +LTL G++Q++V + K+ K
Sbjct: 218 TPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKL-KDNEKNR 276
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + ++ L + ++ A H M Q R ++F+
Sbjct: 277 KLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDF 336
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ T+L RG+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ ++D
Sbjct: 337 QRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396
Query: 389 -RMLADIQRFYNVVIEELPANV 409
++L D+Q + V I ELP +
Sbjct: 397 AKILNDVQDRFEVNISELPDEI 418
>MGI|MGI:99240 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=ISO] [GO:0000346 "transcription export complex"
evidence=ISO] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=ISO] [GO:0030621 "U4 snRNA binding" evidence=ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:99240 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:AF118128 EMBL:AY255786 EMBL:AY255787
EMBL:AC007080 EMBL:AK088867 EMBL:AK051034 EMBL:BC011067
EMBL:BC024859 IPI:IPI00409462 RefSeq:NP_001239386.1
RefSeq:NP_062667.1 UniGene:Mm.439827 ProteinModelPortal:Q9Z1N5
SMR:Q9Z1N5 IntAct:Q9Z1N5 STRING:Q9Z1N5 PhosphoSite:Q9Z1N5
PaxDb:Q9Z1N5 PRIDE:Q9Z1N5 Ensembl:ENSMUST00000068056
Ensembl:ENSMUST00000172549 Ensembl:ENSMUST00000173731 GeneID:53817
KEGG:mmu:53817 InParanoid:Q9Z1N5 NextBio:310679 Bgee:Q9Z1N5
CleanEx:MM_BAT1A Genevestigator:Q9Z1N5 Uniprot:Q9Z1N5
Length = 428
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 150/382 (39%), Positives = 222/382 (58%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+DV+ QA+SG GKTA
Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQL+ + Q LV+ TRELA QI K YM VKV GG S+++D
Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
Query: 152 QRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L H+VVGTPGR+ + R +SL +I+ F+LDE D+ML + + + +IF+
Sbjct: 158 EEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRM 217
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + QV +FSAT+ E + RKFM P+ I V + +LTL G++Q++V + K+ K
Sbjct: 218 TPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKL-KDNEKNR 276
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + ++ L + ++ A H M Q R ++F+
Sbjct: 277 KLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDF 336
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ T+L RG+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ ++D
Sbjct: 337 QRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396
Query: 389 -RMLADIQRFYNVVIEELPANV 409
++L D+Q + V I ELP +
Sbjct: 397 AKILNDVQDRFEVNISELPDEI 418
>RGD|68381 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box helicase 25"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO;ISS] [GO:0006417 "regulation of translation"
evidence=IEA;ISO;ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA;ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0033391 "chromatoid body" evidence=IEA;ISO;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:68381
GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF142629 IPI:IPI00213497 IPI:IPI00760145 IPI:IPI00760150
RefSeq:NP_113818.2 UniGene:Rn.224821 ProteinModelPortal:Q9QY16
SMR:Q9QY16 STRING:Q9QY16 PRIDE:Q9QY16 GeneID:58856 KEGG:rno:58856
UCSC:RGD:68381 InParanoid:Q9QY16 NextBio:611449 ArrayExpress:Q9QY16
Genevestigator:Q9QY16 GermOnline:ENSRNOG00000012260 Uniprot:Q9QY16
Length = 483
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 151/385 (39%), Positives = 230/385 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
+F+ + LKE LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 98 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 156
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDY-MGVKVHACVGGTSVREDQRILS 156
+L +++ L Q L LAPT ELA Q +V+ +G + + V+V + G + +
Sbjct: 157 MLNRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTDVTK 216
Query: 157 AGVHVVVGTPGRVFDM-LRRQSLRPDYIRMFVLDEADEML-SRGFKDQIYDIFQHLPGKI 214
+V+GTPG V D +R+ + IR+FVLDEAD M+ ++GF DQ I + LP +
Sbjct: 217 ---QIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSEC 273
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + + + P I ++++ELTL I+Q++V + + K LC++Y
Sbjct: 274 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCENRKDKYQALCNIY 333
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF TRR WLT +M H VS G++ R I++ FR G +VLI
Sbjct: 334 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLI 393
Query: 335 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDD 388
TT++ ARGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D
Sbjct: 394 TTNVCARGIDVKQVTIVVNFDLPVNQSEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKL 453
Query: 389 RMLADIQRFYNVVIEEL-PANVADL 412
+L IQ +N I++L P ++ ++
Sbjct: 454 PLLMKIQDHFNSSIKQLDPEDMDEI 478
>RGD|70923 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10116 "Rattus norvegicus" [GO:0000245 "spliceosomal complex
assembly" evidence=IEA;ISO] [GO:0000346 "transcription export
complex" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISO] [GO:0005687 "U4 snRNP" evidence=IEA;ISO]
[GO:0005688 "U6 snRNP" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=IEA;ISO] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=IEA;ISO] [GO:0030621 "U4 snRNA binding" evidence=IEA;ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA;ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA;ISO] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:70923 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:M75168 EMBL:AF387339 EMBL:AJ314857 EMBL:BC080243
IPI:IPI00215291 PIR:A42811 RefSeq:NP_579834.2 UniGene:Rn.202950
ProteinModelPortal:Q63413 SMR:Q63413 STRING:Q63413
World-2DPAGE:0004:Q63413 PRIDE:Q63413 Ensembl:ENSRNOT00000001115
GeneID:114612 KEGG:rno:114612 UCSC:RGD:70923 InParanoid:Q63413
NextBio:618775 ArrayExpress:Q63413 Genevestigator:Q63413
GermOnline:ENSRNOG00000000841 Uniprot:Q63413
Length = 428
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 150/382 (39%), Positives = 222/382 (58%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+DV+ QA+SG GKTA
Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQL+ + Q LV+ TRELA QI K YM VKV GG S+++D
Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
Query: 152 QRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L H+VVGTPGR+ + R +SL +I+ F+LDE D+ML + + + +IF+
Sbjct: 158 EEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRM 217
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + QV +FSAT+ E + RKFM P+ I V + +LTL G++Q++V + K+ K
Sbjct: 218 TPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKL-KDNEKNR 276
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + ++ L + ++ A H M Q R ++F+
Sbjct: 277 KLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDF 336
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ T+L RG+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ ++D
Sbjct: 337 QRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396
Query: 389 -RMLADIQRFYNVVIEELPANV 409
++L D+Q + V I ELP +
Sbjct: 397 AKILNDVQDRFEVNISELPDEI 418
>UNIPROTKB|Q2TBP1 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0033391
"chromatoid body" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0007286 "spermatid
development" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q9UHL0
HOVERGEN:HBG107989 EMBL:BC109867 IPI:IPI00724449
RefSeq:NP_001033606.1 UniGene:Bt.14611 ProteinModelPortal:Q2TBP1
SMR:Q2TBP1 PRIDE:Q2TBP1 GeneID:508962 KEGG:bta:508962 CTD:29118
InParanoid:Q2TBP1 OrthoDB:EOG4NS3BD NextBio:20868762 Uniprot:Q2TBP1
Length = 483
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 151/385 (39%), Positives = 231/385 (60%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
+F+ + LKE LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 98 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 156
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDY-MGVKVHACVGGTSVREDQRILS 156
+L +++ L Q L LAPT ELA Q +V+ +G + + V+V + G + +
Sbjct: 157 MLSRVNALKLFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTDVTK 216
Query: 157 AGVHVVVGTPGRVFDM-LRRQSLRPDYIRMFVLDEADEML-SRGFKDQIYDIFQHLPGKI 214
+V+GTPG V D +R+ + IR+FVLDEAD M+ ++GF+DQ I + LP +
Sbjct: 217 ---QIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFEDQSIRIQRALPSEC 273
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + + + P I ++++ELTL I+Q++V + K LC++Y
Sbjct: 274 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIY 333
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF TRR WLT +M H VS G++ + R I++ FR G +VLI
Sbjct: 334 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLI 393
Query: 335 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDD 388
TT++ ARGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D
Sbjct: 394 TTNVCARGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKL 453
Query: 389 RMLADIQRFYNVVIEEL-PANVADL 412
+L IQ +N I++L P ++ ++
Sbjct: 454 PLLMKIQDHFNSSIKQLDPEDMDEI 478
>UNIPROTKB|Q5ZHZ0 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334
EMBL:AJ720994 IPI:IPI00585240 ProteinModelPortal:Q5ZHZ0 SMR:Q5ZHZ0
Uniprot:Q5ZHZ0
Length = 428
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 150/382 (39%), Positives = 222/382 (58%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+DV+ QA+SG GKTA
Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQL+ + Q LV+ TRELA QI K YM VKV GG +V++D
Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAVKKD 157
Query: 152 QRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L H+VVGTPGR+ + R +SL +I+ F+LDE D+ML + + + +IF+
Sbjct: 158 EEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRM 217
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + QV +FSAT+ E + RKFM P+ I V + +LTL G++Q++V + K+ K
Sbjct: 218 TPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKL-KDNEKNR 276
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + ++ L + ++ A H M Q R ++F+
Sbjct: 277 KLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDF 336
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ T+L RG+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ ++D
Sbjct: 337 QRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396
Query: 389 -RMLADIQRFYNVVIEELPANV 409
++L D+Q + V I ELP +
Sbjct: 397 AKILNDVQDRFEVNISELPDEI 418
>UNIPROTKB|Q9NUU7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:AK001988 EMBL:AK223262
EMBL:AL832970 EMBL:CH471241 EMBL:BC005162 EMBL:BC006544
EMBL:BC137496 EMBL:BC137497 IPI:IPI00019918 RefSeq:NP_060802.1
UniGene:Hs.656037 ProteinModelPortal:Q9NUU7 SMR:Q9NUU7
IntAct:Q9NUU7 MINT:MINT-1450935 STRING:Q9NUU7 PhosphoSite:Q9NUU7
DMDM:73919226 PaxDb:Q9NUU7 PeptideAtlas:Q9NUU7 PRIDE:Q9NUU7
DNASU:55308 Ensembl:ENST00000302243 GeneID:55308 KEGG:hsa:55308
UCSC:uc002eyv.3 GeneCards:GC16P070380 H-InvDB:HIX0038837
HGNC:HGNC:25628 HPA:HPA045252 neXtProt:NX_Q9NUU7
PharmGKB:PA134894996 InParanoid:Q9NUU7 PhylomeDB:Q9NUU7
GenomeRNAi:55308 NextBio:59538 ArrayExpress:Q9NUU7 Bgee:Q9NUU7
CleanEx:HS_DDX19A Genevestigator:Q9NUU7 GermOnline:ENSG00000168872
Uniprot:Q9NUU7
Length = 478
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 152/386 (39%), Positives = 226/386 (58%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
SF+ + LK LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD-YMGVKVHACVGGTSVREDQRILS 156
+L +++ Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I
Sbjct: 151 MLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE 210
Query: 157 AGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKI 214
+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I + LP
Sbjct: 211 ---QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + K LC+LY
Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLY 327
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 387
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 387
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
Query: 388 DRMLADIQRFYNVVIEELPANVADLI 413
+L IQ +N IE L + D I
Sbjct: 448 MNILNRIQEHFNKKIERLDTDDLDEI 473
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 149/375 (39%), Positives = 219/375 (58%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F S+GL ENLL + + GF + IQ I P G DV+ +AQ+GTGKTA F L
Sbjct: 16 AFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALA 75
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALG-DYMGVKVHACVGGTSVREDQRILSAGV 159
++D + Q +VLAPTRELA Q+ + + + G D G++V GG S + L G
Sbjct: 76 KIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLERGA 135
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
VVVGTPGR+ D LRR+SL+ D +R+ VLDEADEML+ GF + I I H+P Q+ +F
Sbjct: 136 QVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTAQMCLF 195
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAI 279
SATMPP +I +F+ P I V + I Q+ V K+ L + E +
Sbjct: 196 SATMPPAIRKIANRFLKDPEHIKVAAVKKAKANITQYAWKVSGIT-KMTALERIAEVVEY 254
Query: 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLL 339
+IFV TR + +++ + A +GD++Q R+ + + +SG S +L+ TD++
Sbjct: 255 DAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMKSGKSSILVATDVV 314
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYN 399
ARG+D+ ++SLVINYDLP E Y+HRIGR+GR GR+G++I FV + + +R N
Sbjct: 315 ARGLDIPRISLVINYDLPGDNEAYVHRIGRTGRAGREGMSIAFVRPREMYSIRHYERLTN 374
Query: 400 --VVIEELPANVADL 412
V+ +LP N+ D+
Sbjct: 375 GTVLNYDLP-NIQDI 388
>MGI|MGI:99526 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:99526
GO:GO:0005524 GO:GO:0005737 GO:GO:0015031 GO:GO:0031965
GO:GO:0005643 GO:GO:0003723 EMBL:CH466525 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:L25125 EMBL:AK049467
EMBL:AK146548 EMBL:BC011270 IPI:IPI00123651 PIR:I49731
RefSeq:NP_031942.2 UniGene:Mm.287901 ProteinModelPortal:Q61655
SMR:Q61655 IntAct:Q61655 PhosphoSite:Q61655
REPRODUCTION-2DPAGE:Q61655 PaxDb:Q61655 PRIDE:Q61655
Ensembl:ENSMUST00000040416 GeneID:13680 KEGG:mmu:13680
InParanoid:Q543M2 ChiTaRS:DDX19A NextBio:284434 Bgee:Q61655
CleanEx:MM_DDX19A Genevestigator:Q61655
GermOnline:ENSMUSG00000015023 Uniprot:Q61655
Length = 478
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 151/386 (39%), Positives = 227/386 (58%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
SF+ + LK LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILS 156
+L +++ Q L L+PT ELA Q KV+ +G + +K+ V G + Q++
Sbjct: 151 MLSRVEPADRYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKVSE 210
Query: 157 AGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKI 214
+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I + LP
Sbjct: 211 ---QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + E K LC+LY
Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLY 327
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 387
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 387
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
Query: 388 DRMLADIQRFYNVVIEELPANVADLI 413
+L IQ +N IE L + D I
Sbjct: 448 MNILNRIQEHFNKKIERLDTDDLDEI 473
>UNIPROTKB|F1RVF0 [details] [associations]
symbol:LOC100512980 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:ESATTFE
Ensembl:ENSSSCT00000012145 Uniprot:F1RVF0
Length = 462
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 151/385 (39%), Positives = 229/385 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
+F+ + LKE LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 77 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 135
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDY-MGVKVHACVGGTSVREDQRILS 156
+L +++ L Q L LAPT ELA Q +V+ +G + + V+V + G + I
Sbjct: 136 MLSRVNALELFPQCLCLAPTYELALQTGRVVERMGRFCVDVQVMYAIRGNRIPRGTDITK 195
Query: 157 AGVHVVVGTPGRVFDM-LRRQSLRPDYIRMFVLDEADEML-SRGFKDQIYDIFQHLPGKI 214
+++GTPG V D +R+ + IR+FVLDEAD M+ ++GF DQ I + LP
Sbjct: 196 ---QIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSGC 252
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + + + P I ++++ELTL I+Q++V + K LC++Y
Sbjct: 253 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIY 312
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF TRR WLT +M H VS G++ + R I++ FR G +VLI
Sbjct: 313 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLRGELTVDQRAAIIQRFRDGKEKVLI 372
Query: 335 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDD 388
TT++ ARGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D
Sbjct: 373 TTNVCARGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKL 432
Query: 389 RMLADIQRFYNVVIEEL-PANVADL 412
+L IQ +N I++L P ++ ++
Sbjct: 433 PLLMKIQDHFNSNIKQLDPEDMDEI 457
>UNIPROTKB|F1PIZ6 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:AAEX03003382 Ensembl:ENSCAFT00000016722 Uniprot:F1PIZ6
Length = 462
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 149/385 (38%), Positives = 230/385 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
+F+ + LKE LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 77 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 135
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDY-MGVKVHACVGGTSVREDQRILS 156
+L +++ L Q L LAPT ELA Q +V+ +G + + V+V + G + +
Sbjct: 136 MLSRVNTLELFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNHIPRGTDVTK 195
Query: 157 AGVHVVVGTPGRVFDM-LRRQSLRPDYIRMFVLDEADEML-SRGFKDQIYDIFQHLPGKI 214
+++GTPG V D +R+ + IR+FVLDEAD M+ ++GF DQ I + LP +
Sbjct: 196 ---QIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSEC 252
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + + + P I ++++ELTL I+Q++V + + K LC++Y
Sbjct: 253 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLSNIRQYYVLCENRKDKYQALCNIY 312
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF TRR WLT +M H VS G++ + R I++ FR G +VLI
Sbjct: 313 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLI 372
Query: 335 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDD 388
TT++ RGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D
Sbjct: 373 TTNVSRRGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKL 432
Query: 389 RMLADIQRFYNVVIEEL-PANVADL 412
+L IQ +N I++L P ++ ++
Sbjct: 433 PLLMKIQDHFNSSIKQLDPEDMDEI 457
>UNIPROTKB|E2QY95 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:10212
KO:K13182 GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:AAEX03012368 RefSeq:XP_533895.2 Ensembl:ENSCAFT00000025943
GeneID:476689 KEGG:cfa:476689 NextBio:20852303 Uniprot:E2QY95
Length = 427
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 148/382 (38%), Positives = 222/382 (58%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+DV+ QA+SG GKTA
Sbjct: 37 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 96
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQ++ + Q LV+ TRELA QI K YM VKV GG S+++D
Sbjct: 97 VFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKD 156
Query: 152 QRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L HVVVGTPGR+ ++R +SL ++ FVLDE D+ML + + + +IF+
Sbjct: 157 EEVLKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRL 216
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + Q +FSAT+ E + RKFM P+ + V + +LTL G++Q++V + K+ K
Sbjct: 217 TPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKL-KDSEKNR 275
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + ++ L + ++ A H M Q R ++F+
Sbjct: 276 KLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDF 335
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+AI FV+ ++D
Sbjct: 336 QRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 395
Query: 389 -RMLADIQRFYNVVIEELPANV 409
++L D+Q + V + ELP +
Sbjct: 396 AKILNDVQDRFEVNVAELPEEI 417
>UNIPROTKB|F1SCH3 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:WANCVIS EMBL:FP103015
Ensembl:ENSSSCT00000015052 Uniprot:F1SCH3
Length = 475
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 148/382 (38%), Positives = 222/382 (58%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+DV+ QA+SG GKTA
Sbjct: 85 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 144
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQ++ + Q LV+ TRELA QI K YM VKV GG S+++D
Sbjct: 145 VFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKD 204
Query: 152 QRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L HVVVGTPGR+ ++R +SL ++ FVLDE D+ML + + + +IF+
Sbjct: 205 EEVLKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRL 264
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + Q +FSAT+ E + RKFM P+ + V + +LTL G++Q++V + K+ K
Sbjct: 265 TPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKL-KDSEKNR 323
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + ++ L + ++ A H M Q R ++F+
Sbjct: 324 KLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDF 383
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+AI FV+ ++D
Sbjct: 384 QRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 443
Query: 389 -RMLADIQRFYNVVIEELPANV 409
++L D+Q + V + ELP +
Sbjct: 444 AKILNDVQDRFEVNVAELPEEI 465
>UNIPROTKB|F1MSI6 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003676 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
IPI:IPI00724449 OMA:WHFAERI EMBL:DAAA02063102
Ensembl:ENSBTAT00000005587 Uniprot:F1MSI6
Length = 483
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 150/385 (38%), Positives = 230/385 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
+F+ + LKE LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 98 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 156
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDY-MGVKVHACVGGTSVREDQRILS 156
+L +++ L Q L LAPT ELA Q +V+ +G + + V+V + G + +
Sbjct: 157 MLSRVNALKLFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTDVTK 216
Query: 157 AGVHVVVGTPGRVFDM-LRRQSLRPDYIRMFVLDEADEML-SRGFKDQIYDIFQHLPGKI 214
+V+GTPG V D +R+ + IR+FVLDEAD M+ ++GF DQ I + LP +
Sbjct: 217 ---QIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFADQSIRIQRALPSEC 273
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + + + P I ++++ELTL I+Q++V + K LC++Y
Sbjct: 274 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIY 333
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF TRR WLT +M H VS G++ + R I++ FR G +VLI
Sbjct: 334 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLI 393
Query: 335 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDD 388
TT++ ARGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D
Sbjct: 394 TTNVCARGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKL 453
Query: 389 RMLADIQRFYNVVIEEL-PANVADL 412
+L IQ ++ I++L P ++ ++
Sbjct: 454 PLLMKIQDHFSENIKQLDPEDMDEI 478
>UNIPROTKB|Q9UHL0 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006406 "mRNA export from
nucleus" evidence=ISS] [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0033391 "chromatoid body" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 EMBL:CH471065
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF155140 EMBL:AY735312 EMBL:AY735301 EMBL:AY735302
EMBL:AY735303 EMBL:AY735304 EMBL:AY735305 EMBL:AY735306
EMBL:AY735307 EMBL:AY735308 EMBL:AY735309 EMBL:AY735310
EMBL:AY735311 EMBL:AK312772 EMBL:BC035388 EMBL:BC050360
IPI:IPI00296139 IPI:IPI00759454 RefSeq:NP_037396.3
UniGene:Hs.420263 PDB:2RB4 PDBsum:2RB4 ProteinModelPortal:Q9UHL0
SMR:Q9UHL0 STRING:Q9UHL0 PhosphoSite:Q9UHL0 DMDM:61222937
PaxDb:Q9UHL0 PRIDE:Q9UHL0 Ensembl:ENST00000263576 GeneID:29118
KEGG:hsa:29118 UCSC:uc001qcz.4 GeneCards:GC11P125773
HGNC:HGNC:18698 HPA:HPA020090 HPA:HPA020137 MIM:607663
neXtProt:NX_Q9UHL0 PharmGKB:PA38644 InParanoid:Q9UHL0 OMA:WHFAERI
PhylomeDB:Q9UHL0 ChiTaRS:DDX25 EvolutionaryTrace:Q9UHL0
GenomeRNAi:29118 NextBio:52207 ArrayExpress:Q9UHL0 Bgee:Q9UHL0
CleanEx:HS_DDX25 Genevestigator:Q9UHL0 GermOnline:ENSG00000109832
Uniprot:Q9UHL0
Length = 483
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 152/385 (39%), Positives = 225/385 (58%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
+F+ + LKE LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 98 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 156
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDY-MGVKVHACVGGTSVREDQRILS 156
+L +++ L Q L LAPT ELA Q +V+ +G + + V+V + G + I
Sbjct: 157 MLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITK 216
Query: 157 AGVHVVVGTPGRVFDMLRRQSLRP-DYIRMFVLDEADEML-SRGFKDQIYDIFQHLPGKI 214
+++GTPG V D + L IR+FVLDEAD M+ ++GF D I + LP +
Sbjct: 217 ---QIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSEC 273
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + + P I ++++ELTL I+Q++V + + K LC++Y
Sbjct: 274 QMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIY 333
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
++ I Q++IF TRR WLT +M H VS G++ R I++ FR G +VLI
Sbjct: 334 GSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLI 393
Query: 335 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDD 388
TT++ ARGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D+
Sbjct: 394 TTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDEL 453
Query: 389 RMLADIQRFYNVVIEELPANVADLI 413
L IQ +N I++L A D I
Sbjct: 454 PSLMKIQDHFNSSIKQLNAEDMDEI 478
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 143/365 (39%), Positives = 209/365 (57%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F + L +L + GF P+ IQ I +G D + +AQ+GTGKTA F +L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 102 LDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGVH 160
L+ + QA+V+APTRELA Q+ ++ LG + G+KV GG S+ + R L +G H
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
+VVGTPGRV D++ R L D F+LDEADEML GF D + I + P Q +FS
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
ATMPP EI +F+ P + V T+ ++Q + V E K + + L ET
Sbjct: 208 ATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVE-KDEAMARLLETEETD 266
Query: 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLA 340
S++FV TR+ + L D + +R +A HGD+ Q+ R+ + + G +L+ TD++A
Sbjct: 267 ASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVA 326
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNV 400
RG+DV +++ V NYD+P E+Y+HRIGR+GR GRKG AI V + RML I+R
Sbjct: 327 RGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVTRS 386
Query: 401 VIEEL 405
+EE+
Sbjct: 387 SMEEI 391
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 143/365 (39%), Positives = 209/365 (57%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F + L +L + GF P+ IQ I +G D + +AQ+GTGKTA F +L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 102 LDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGVH 160
L+ + QA+V+APTRELA Q+ ++ LG + G+KV GG S+ + R L +G H
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
+VVGTPGRV D++ R L D F+LDEADEML GF D + I + P Q +FS
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
ATMPP EI +F+ P + V T+ ++Q + V E K + + L ET
Sbjct: 208 ATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVE-KDEAMARLLETEETD 266
Query: 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLA 340
S++FV TR+ + L D + +R +A HGD+ Q+ R+ + + G +L+ TD++A
Sbjct: 267 ASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVA 326
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNV 400
RG+DV +++ V NYD+P E+Y+HRIGR+GR GRKG AI V + RML I+R
Sbjct: 327 RGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVTRS 386
Query: 401 VIEEL 405
+EE+
Sbjct: 387 SMEEI 391
>UNIPROTKB|Q5E970 [details] [associations]
symbol:DDX39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
isoform 1" species:9913 "Bos taurus" [GO:0006406 "mRNA export from
nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334
KO:K13182 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
OMA:WANCVIS EMBL:DAAA02019335 EMBL:BT021050 IPI:IPI00700228
RefSeq:NP_001029924.1 UniGene:Bt.29896 SMR:Q5E970 STRING:Q5E970
Ensembl:ENSBTAT00000029088 GeneID:614215 KEGG:bta:614215
InParanoid:Q5E970 NextBio:20899000 Uniprot:Q5E970
Length = 427
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 146/382 (38%), Positives = 222/382 (58%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+D++ QA+SG GKTA
Sbjct: 37 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTA 96
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQ++ + Q LV+ TRELA QI K YM VKV GG S+++D
Sbjct: 97 VFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKD 156
Query: 152 QRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L HVVVGTPGR+ ++R +SL ++ FVLDE D+ML + + + +IF+
Sbjct: 157 EEVLKRNCPHVVVGTPGRILALVRNRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRL 216
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + Q +FSAT+ E + RKFM P+ + V + +LTL G++Q++V + K+ K
Sbjct: 217 TPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKL-KDSEKNR 275
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + ++ L + ++ A H M Q R ++F+
Sbjct: 276 KLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDF 335
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+A+ FV+ ++D
Sbjct: 336 QRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDEND 395
Query: 389 -RMLADIQRFYNVVIEELPANV 409
++L D+Q + V + ELP +
Sbjct: 396 AKILNDVQDRFEVNVAELPEEI 417
>MGI|MGI:1915528 [details] [associations]
symbol:Ddx39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915528 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX EMBL:AK088894 EMBL:AK145927 EMBL:AK146294
EMBL:AK150997 EMBL:AK162752 EMBL:AK168079 EMBL:BC020134
IPI:IPI00123878 IPI:IPI00553461 RefSeq:NP_932099.2 UniGene:Mm.28222
ProteinModelPortal:Q8VDW0 SMR:Q8VDW0 STRING:Q8VDW0
PhosphoSite:Q8VDW0 PaxDb:Q8VDW0 PRIDE:Q8VDW0
Ensembl:ENSMUST00000019576 Ensembl:ENSMUST00000109810
Ensembl:ENSMUST00000172396 GeneID:68278 KEGG:mmu:68278
UCSC:uc008chc.2 CTD:68278 GeneTree:ENSGT00660000095549
InParanoid:Q8VDW0 OMA:WANCVIS NextBio:326910 Bgee:Q8VDW0
CleanEx:MM_DDX39 Genevestigator:Q8VDW0
GermOnline:ENSMUSG00000005481 Uniprot:Q8VDW0
Length = 427
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 147/382 (38%), Positives = 222/382 (58%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+DV+ QA+SG GKTA
Sbjct: 37 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 96
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQ++ + Q LV+ TRELA QI K YM VKV GG S+++D
Sbjct: 97 VFVLATLQQIEPVNGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKD 156
Query: 152 QRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L HVVVGTPGR+ ++R +SL ++ FVLDE D+ML + + + +IF+
Sbjct: 157 EDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRL 216
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + Q +FSAT+ E + RKFM P+ + V + +LTL G++Q++V + K+ K
Sbjct: 217 TPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKL-KDSEKNR 275
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + ++ L + ++ A H M Q R ++F+
Sbjct: 276 KLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDF 335
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+A+ FV+ ++D
Sbjct: 336 QRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDEND 395
Query: 389 -RMLADIQRFYNVVIEELPANV 409
++L D+Q + V + ELP +
Sbjct: 396 AKILNDVQDRFEVNVAELPEEI 417
>RGD|619920 [details] [associations]
symbol:Ddx39a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:AF063447 RGD:619920
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:BC086328 IPI:IPI00325144 RefSeq:NP_446015.2 UniGene:Rn.161716
ProteinModelPortal:Q5U216 SMR:Q5U216 STRING:Q5U216 PRIDE:Q5U216
Ensembl:ENSRNOT00000045974 GeneID:89827 KEGG:rno:89827
InParanoid:Q5U216 NextBio:617744 Genevestigator:Q5U216
GermOnline:ENSRNOG00000004373 Uniprot:Q5U216
Length = 427
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 147/382 (38%), Positives = 222/382 (58%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+DV+ QA+SG GKTA
Sbjct: 37 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 96
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQ++ + Q LV+ TRELA QI K YM VKV GG S+++D
Sbjct: 97 VFVLATLQQIEPINGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKD 156
Query: 152 QRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L HVVVGTPGR+ ++R +SL ++ FVLDE D+ML + + + +IF+
Sbjct: 157 EDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRL 216
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + Q +FSAT+ E + RKFM P+ + V + +LTL G++Q++V + K+ K
Sbjct: 217 TPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKL-KDSEKNR 275
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + ++ L + ++ A H M Q R ++F+
Sbjct: 276 KLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDF 335
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+A+ FV+ ++D
Sbjct: 336 QRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDEND 395
Query: 389 -RMLADIQRFYNVVIEELPANV 409
++L D+Q + V + ELP +
Sbjct: 396 AKILNDVQDRFEVNVAELPEEI 417
>UNIPROTKB|Q9DGP9 [details] [associations]
symbol:deadsouth "ATP-dependent RNA helicase DDX25"
species:8355 "Xenopus laevis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0003724 "RNA helicase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032019 "mitochondrial cloud" evidence=IDA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0045495 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0032019 HSSP:Q9UHL0 HOVERGEN:HBG107989 CTD:29118
EMBL:AF190623 RefSeq:NP_001082017.1 UniGene:Xl.670
ProteinModelPortal:Q9DGP9 SMR:Q9DGP9 PRIDE:Q9DGP9 GeneID:398180
KEGG:xla:398180 Xenbase:XB-GENE-958142 Uniprot:Q9DGP9
Length = 483
Score = 623 (224.4 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 140/376 (37%), Positives = 218/376 (57%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGI 98
SF+ + LK LLRGIYA GF +PS IQ+ + ++I Q+QSGTGKTA F +
Sbjct: 98 SFEELHLKNELLRGIYAMGFNRPSKIQENALPMMLADPPQNLIAQSQSGTGKTAAFVLAM 157
Query: 99 LQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSA 157
L ++D Q + L+PT ELA Q KV+ +G + G++V + G + R L A
Sbjct: 158 LSRVDANKKYPQCICLSPTFELALQTGKVVEEMGKFCAGIEVIYALRGNRPGKGSR-LEA 216
Query: 158 GVHVVVGTPGRVFDM-LRRQSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKIQ 215
+V+GTPG V D + + + + I +FVLDEAD M++ +G D + + +P Q
Sbjct: 217 --QIVIGTPGTVLDWCFKLRLITVENISVFVLDEADVMINVQGHSDHSVRVKRSMPKSCQ 274
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYE 275
+ +FSAT + + P I +K++ELTL+ I+QF+ + +E K LC+LY
Sbjct: 275 MLLFSATFEDSVWAFAERIVPDPNIIKLKKEELTLKNIQQFYDQCENKEQKYSALCNLYG 334
Query: 276 TLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335
+ I Q+++F TR+ WL+ ++ H V+ G++ R +++ FR G +VL+T
Sbjct: 335 VITIAQAIVFCQTRKIASWLSQKLSDDGHQVALLSGELPVYDRADMIQRFREGREKVLVT 394
Query: 336 TDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFVTRDDDR 389
T++ ARGIDV+QVS+V+N+DLP E YLHRIGR+GRFG+KG+A++ +
Sbjct: 395 TNVCARGIDVEQVSIVVNFDLPVNVDGSVDFETYLHRIGRTGRFGKKGIAVSLIENFFVY 454
Query: 390 MLADIQRFYNVVIEEL 405
ML +I+ +N I +L
Sbjct: 455 MLKEIEDHFNTKITKL 470
Score = 38 (18.4 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 9 SGFDARSFDSNMNNLLSEEGQDF 31
SG A D NN+++E DF
Sbjct: 12 SGSQAELLDFQNNNVVAEGKLDF 34
>FB|FBgn0004419 [details] [associations]
symbol:me31B "maternal expression at 31B" species:7227
"Drosophila melanogaster" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IDA] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0043186 "P granule" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005875 GO:GO:0007095 EMBL:AE014134 GO:GO:0003723
GO:GO:0000932 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033962 GO:GO:0004004 eggNOG:COG0513
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 EMBL:M59926 EMBL:AY051663
PIR:A39157 RefSeq:NP_523533.2 RefSeq:NP_723539.1 UniGene:Dm.2770
ProteinModelPortal:P23128 SMR:P23128 IntAct:P23128 MINT:MINT-769276
STRING:P23128 PaxDb:P23128 PRIDE:P23128 EnsemblMetazoa:FBtr0079975
GeneID:34364 KEGG:dme:Dmel_CG4916 CTD:34364 FlyBase:FBgn0004419
InParanoid:P23128 OrthoDB:EOG45QFVG PhylomeDB:P23128 ChiTaRS:me31B
GenomeRNAi:34364 NextBio:788139 Bgee:P23128 GermOnline:CG4916
Uniprot:P23128
Length = 459
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 137/367 (37%), Positives = 213/367 (58%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK LL GI+ G+E+PS IQ+ I G DV+ +A++GTGKT +C +L
Sbjct: 58 NEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVL 117
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159
+Q+D QALV+ PTRELA Q ++ L ++ ++V GGT +++D + V
Sbjct: 118 EQIDPTKDYIQALVMVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKDDILRIYQKV 177
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
+++ TPGR+ D++ ++ + R+ VLDEAD++LS F+ + + LP Q+ +F
Sbjct: 178 QLIIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKLPKDPQILLF 237
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAI 279
SAT P K + +P I + +ELTL+G+ Q++ V +E K+ L L+ L I
Sbjct: 238 SATFPLTVKNFMEKHLREPYEINLM-EELTLKGVTQYYAFV-QERQKVHCLNTLFSKLQI 295
Query: 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLL 339
QS+IF N+ ++V+ L ++ + H M Q R+ + +FR G R L+ +DL
Sbjct: 296 NQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLF 355
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYN 399
RGIDVQ V++VIN+D P E YLHRIGRSGRFG G+AIN +T +D L I++
Sbjct: 356 TRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFDLHRIEKELG 415
Query: 400 VVIEELP 406
I+ +P
Sbjct: 416 TEIKPIP 422
>UNIPROTKB|O00148 [details] [associations]
symbol:DDX39A "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=IGI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:U90426 EMBL:AK026614 EMBL:BC001009
IPI:IPI00940237 RefSeq:NP_005795.2 UniGene:Hs.311609
ProteinModelPortal:O00148 SMR:O00148 IntAct:O00148
MINT:MINT-1035991 STRING:O00148 PhosphoSite:O00148 PaxDb:O00148
PeptideAtlas:O00148 PRIDE:O00148 DNASU:10212
Ensembl:ENST00000242776 GeneID:10212 KEGG:hsa:10212 UCSC:uc002myo.3
CTD:10212 GeneCards:GC19M014521 HGNC:HGNC:17821 neXtProt:NX_O00148
PharmGKB:PA27226 HOVERGEN:HBG107334 InParanoid:O00148 KO:K13182
OrthoDB:EOG4XSKPX PhylomeDB:O00148 ChiTaRS:DDX39A GenomeRNAi:10212
NextBio:38664 ArrayExpress:O00148 Bgee:O00148 CleanEx:HS_DDX39
Genevestigator:O00148 GermOnline:ENSG00000123136 Uniprot:O00148
Length = 427
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 146/387 (37%), Positives = 223/387 (57%)
Query: 29 QDFFVSYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 87
+D SY ++ S F LK LLR I GFE PS +Q I G+DV+ QA+SG
Sbjct: 32 KDIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSG 91
Query: 88 TGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGT 146
GKTA F LQQ++ + Q LV+ TRELA QI K YM VKV GG
Sbjct: 92 MGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGL 151
Query: 147 SVREDQRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIY 204
S+++D+ +L HVVVGTPGR+ ++R +S ++ FVLDE D+ML + + +
Sbjct: 152 SIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQ 211
Query: 205 DIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKE 263
+IF+ P + Q +FSAT+ + + RKFM P+ + V + +LTL G++Q++V + K+
Sbjct: 212 EIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKL-KD 270
Query: 264 EWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMR 323
K L DL + L Q +IFV + ++ L + ++ A H M Q R +
Sbjct: 271 SEKNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQ 330
Query: 324 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 383
+F+ R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+AI FV
Sbjct: 331 QFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFV 390
Query: 384 TRDDD-RMLADIQRFYNVVIEELPANV 409
+ ++D ++L D+Q + V + ELP +
Sbjct: 391 SDENDAKILNDVQDRFEVNVAELPEEI 417
>FB|FBgn0014189 [details] [associations]
symbol:Hel25E "Helicase at 25E" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IC;NAS;IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0005700
"polytene chromosome" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS;NAS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005875 GO:GO:0007052
EMBL:AE014134 GO:GO:0016607 GO:GO:0005681 GO:GO:0003723
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095549
KO:K12812 EMBL:X79802 EMBL:L06018 EMBL:AY118921 PIR:S51601
RefSeq:NP_723089.1 RefSeq:NP_723090.1 RefSeq:NP_723091.1
UniGene:Dm.3332 ProteinModelPortal:Q27268 SMR:Q27268 DIP:DIP-20199N
IntAct:Q27268 MINT:MINT-304772 STRING:Q27268 PaxDb:Q27268
PRIDE:Q27268 EnsemblMetazoa:FBtr0079123 EnsemblMetazoa:FBtr0079124
EnsemblMetazoa:FBtr0079125 GeneID:33781 KEGG:dme:Dmel_CG7269
CTD:33781 FlyBase:FBgn0014189 InParanoid:Q27268 OMA:ENRFLEE
OrthoDB:EOG47WM45 PhylomeDB:Q27268 GenomeRNAi:33781 NextBio:785218
Bgee:Q27268 GermOnline:CG7269 Uniprot:Q27268
Length = 424
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 145/386 (37%), Positives = 226/386 (58%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
+Y ++ S F LK +LR I GFE PS +Q I G+D++ QA+SG GKTA
Sbjct: 34 TYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 93
Query: 93 TFCSGILQQLD-YESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVRE 150
F LQQL+ ++ C LV+ TRELA QI K YM VKV GG ++++
Sbjct: 94 VFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQK 153
Query: 151 DQRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQ 208
D+ L +G H+VVGTPGR+ ++R + L ++ FVLDE D+ML + + + +IF+
Sbjct: 154 DEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFR 213
Query: 209 HLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKL 267
P QV +FSAT+ + + +KFM P+ + V + +LTL G++Q +VN+ KE K
Sbjct: 214 STPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNL-KENEKN 272
Query: 268 DTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRS 327
L +L + L Q VIFV + ++ L+ + ++ H M Q R ++F+
Sbjct: 273 KKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKD 332
Query: 328 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 387
R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+AI FV+ ++
Sbjct: 333 FQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEN 392
Query: 388 D-RMLADIQRFYNVVIEELPANVADL 412
D ++L ++Q ++V I ELP + DL
Sbjct: 393 DAKILNEVQDRFDVNISELPEEI-DL 417
>UNIPROTKB|Q5ZMC1 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K01529 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:11269
EMBL:AADN02040672 UniGene:Gga.7753 EMBL:AJ719463 IPI:IPI00571485
RefSeq:NP_001006568.1 SMR:Q5ZMC1 Ensembl:ENSGALT00000039619
GeneID:426504 KEGG:gga:426504 InParanoid:Q5ZMC1 NextBio:20828056
Uniprot:Q5ZMC1
Length = 479
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 149/386 (38%), Positives = 228/386 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
SF+ + LK LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 93 SFEELHLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 151
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD-YMGVKVHACVGGTSVREDQRILS 156
+L +++ + Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I
Sbjct: 152 MLSRVEPGNKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE 211
Query: 157 AGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKI 214
+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I + LP
Sbjct: 212 ---QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRDC 268
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + + K LC++Y
Sbjct: 269 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFRALCNIY 328
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q+++F +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 329 GAITIAQAMVFCHTRKTAGWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 388
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 387
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+AIN V ++
Sbjct: 389 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKHS 448
Query: 388 DRMLADIQRFYNVVIEELPANVADLI 413
+L IQ ++ I +L + D I
Sbjct: 449 MNILNRIQEHFSKKINKLDTDDLDEI 474
>UNIPROTKB|J3QR64 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000581384
Uniprot:J3QR64
Length = 214
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 126/178 (70%), Positives = 145/178 (81%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 37 NWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTAT 96
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVR-EDQ 152
F ILQQ++ + QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR E Q
Sbjct: 97 FAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQ 156
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHL 210
++ H++VGTPGRVFDML R+ L P YI+MFVLDEADEMLSRGFKDQIYDIFQ L
Sbjct: 157 KLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKL 214
>UNIPROTKB|B4DRZ7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
UniGene:Hs.656037 HGNC:HGNC:25628 EMBL:AC012184 EMBL:AK299504
IPI:IPI01009735 SMR:B4DRZ7 STRING:B4DRZ7 Ensembl:ENST00000443119
UCSC:uc002eys.3 Uniprot:B4DRZ7
Length = 388
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 149/379 (39%), Positives = 221/379 (58%)
Query: 48 KENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDY 104
K LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 9 KPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEP 67
Query: 105 ESLQCQALVLAPTRELAQQIEKVMRALGD-YMGVKVHACVGGTSVREDQRILSAGVHVVV 163
Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I +V+
Sbjct: 68 SDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE---QIVI 124
Query: 164 GTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKIQVGVFSA 221
GTPG V D + + + P I++FVLDEAD M++ +G +DQ I + LP Q+ +FSA
Sbjct: 125 GTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSA 184
Query: 222 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQ 281
T + +K + P I +KR+E TL+ IKQ++V + K LC+LY + I Q
Sbjct: 185 TFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQ 244
Query: 282 SVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLAR 341
++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ AR
Sbjct: 245 AMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCAR 304
Query: 342 GIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDDRMLADI 394
GIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L I
Sbjct: 305 GIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRI 364
Query: 395 QRFYNVVIEELPANVADLI 413
Q +N IE L + D I
Sbjct: 365 QEHFNKKIERLDTDDLDEI 383
>UNIPROTKB|I3L352 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:25628 EMBL:AC012184
Ensembl:ENST00000575878 Uniprot:I3L352
Length = 396
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 149/379 (39%), Positives = 221/379 (58%)
Query: 48 KENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDY 104
K LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 17 KPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEP 75
Query: 105 ESLQCQALVLAPTRELAQQIEKVMRALGD-YMGVKVHACVGGTSVREDQRILSAGVHVVV 163
Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I +V+
Sbjct: 76 SDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE---QIVI 132
Query: 164 GTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKIQVGVFSA 221
GTPG V D + + + P I++FVLDEAD M++ +G +DQ I + LP Q+ +FSA
Sbjct: 133 GTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSA 192
Query: 222 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQ 281
T + +K + P I +KR+E TL+ IKQ++V + K LC+LY + I Q
Sbjct: 193 TFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQ 252
Query: 282 SVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLAR 341
++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ AR
Sbjct: 253 AMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCAR 312
Query: 342 GIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDDRMLADI 394
GIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L I
Sbjct: 313 GIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRI 372
Query: 395 QRFYNVVIEELPANVADLI 413
Q +N IE L + D I
Sbjct: 373 QEHFNKKIERLDTDDLDEI 391
>GENEDB_PFALCIPARUM|PFC0915w [details] [associations]
symbol:PFC0915w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006200 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844502 HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
ProtClustDB:CLSZ2429504 RefSeq:XP_001351278.1
ProteinModelPortal:O97285 SMR:O97285 EnsemblProtists:PFC0915w:mRNA
GeneID:814522 KEGG:pfa:PFC0915w EuPathDB:PlasmoDB:PF3D7_0320800
Uniprot:O97285
Length = 433
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 138/370 (37%), Positives = 216/370 (58%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ LK LL GI+ G+EKPS IQ+ I G +++ +A++GTGKTA F +L
Sbjct: 60 NEFEDYFLKRELLMGIFEKGYEKPSPIQEESIPVALAGKNILARAKNGTGKTAAFAIPLL 119
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159
++ + Q L+L PTRELA Q +++ LG +M V+ GGTS+RED L V
Sbjct: 120 EKCNTHKNFIQGLILVPTRELALQTSAMIKELGKHMKVQCMVTTGGTSLREDIMRLYNVV 179
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
H++ GTPGR+ D+ + + V+DEAD++LS F+ + ++ + LP + Q+ ++
Sbjct: 180 HILCGTPGRILDLANKDVANLSGCHIMVMDEADKLLSPEFQPIVEELMKFLPKEKQILMY 239
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAI 279
SAT P E +++ I + DELTL+GI Q++ V KE K+ L L+ L I
Sbjct: 240 SATFPVTVKEFRAIYLSDAHEINLM-DELTLKGITQYYAFV-KERQKVHCLNTLFAKLQI 297
Query: 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLL 339
Q++IF N+ +V+ L ++ ++ H M Q R+ + +FR+G+ R L+++DL
Sbjct: 298 NQAIIFCNSITRVELLAKKITELGYSSFYIHARMSQTHRNRVFHDFRNGACRCLVSSDLF 357
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYN 399
RGID+Q V++VIN+D P E YLHRIGRSGR+G G+AIN +T +D L I+
Sbjct: 358 TRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRYGHLGLAINLITFEDRFNLYKIEVELG 417
Query: 400 VVIEELPANV 409
I+ +P +
Sbjct: 418 TEIQPIPNEI 427
>UNIPROTKB|F1S758 [details] [associations]
symbol:LOC100523329 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:CU928873 Ensembl:ENSSSCT00000016589 Uniprot:F1S758
Length = 379
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 149/378 (39%), Positives = 224/378 (59%)
Query: 48 KENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDY 104
KE LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 1 KEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNA 59
Query: 105 ESLQCQALVLAPTRELAQQIEKVMRALGDY-MGVKVHACVGGTSVREDQRILSAGVHVVV 163
L Q L LAPT ELA Q +V+ +G + + V+V + G + I +++
Sbjct: 60 LELFPQCLCLAPTYELALQTGRVVERMGRFCVDVQVMYAIRGNRIPRGTDITK---QIII 116
Query: 164 GTPGRVFDM-LRRQSLRPDYIRMFVLDEADEML-SRGFKDQIYDIFQHLPGKIQVGVFSA 221
GTPG V D +R+ + IR+FVLDEAD M+ ++GF DQ I + LP Q+ +FSA
Sbjct: 117 GTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSGCQMLLFSA 176
Query: 222 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQ 281
T + + + P I ++++ELTL I+Q++V + K LC++Y + I Q
Sbjct: 177 TFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIYGGITIGQ 236
Query: 282 SVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLAR 341
++IF TRR WLT +M H VS G++ + R I++ FR G +VLITT++ AR
Sbjct: 237 AIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRAAIIQRFRDGKEKVLITTNVCAR 296
Query: 342 GIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQ 395
GIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D +L IQ
Sbjct: 297 GIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQ 356
Query: 396 RFYNVVIEEL-PANVADL 412
+N I++L P ++ ++
Sbjct: 357 DHFNSNIKQLDPEDMDEI 374
>UNIPROTKB|A4RBS3 [details] [associations]
symbol:SUB2 "ATP-dependent RNA helicase SUB2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM000230 EMBL:CM001237 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12812
RefSeq:XP_003720935.1 ProteinModelPortal:A4RBS3 SMR:A4RBS3
STRING:A4RBS3 PRIDE:A4RBS3 EnsemblFungi:MGG_02806T0 GeneID:2682359
KEGG:mgr:MGG_02806 OrthoDB:EOG4H49C6 Uniprot:A4RBS3
Length = 436
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 147/386 (38%), Positives = 222/386 (57%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ + F LK LLR I GFE PS +QQ I G D+I QA+SG GKTA
Sbjct: 45 SYVGIHSTGFRDFLLKPELLRAIGDCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTA 104
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQ++ + +C LV+ TRELA QI YM +K GGT +++D
Sbjct: 105 VFVLTTLQQVEPVAGECSVLVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFFGGTPIQKD 164
Query: 152 QRILS---AGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIF 207
+L H++VGTPGR+ ++R + LR +R+FVLDE D+ML + + + +IF
Sbjct: 165 AELLKNKETHPHIIVGTPGRLNALVRDKFLRLSSVRIFVLDECDKMLDQIDMRRDVQEIF 224
Query: 208 QHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWK 266
+ P + QV +FSAT+ E I +KFM P V D +LTL G++Q+ V ++++E K
Sbjct: 225 RATPQQKQVMMFSATLSDEIKPICKKFMQNPTEHYVDEDTKLTLHGLQQYFVALEEKE-K 283
Query: 267 LDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFR 326
L +L + L Q +IFV + + L +R + A H + Q R +EF+
Sbjct: 284 NRKLNELLDDLQFNQVIIFVKSTLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFK 343
Query: 327 SGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD 386
+ R+ + TD+ RGID+++++L INYD+P ++YLHR+GR+GRFG KG+A++FVT D
Sbjct: 344 EFNKRICVATDVFGRGIDIERINLAINYDMPADADSYLHRVGRAGRFGTKGLAVSFVTND 403
Query: 387 DDR-MLADIQRFYNVVIEELPANVAD 411
D+ +L I++ + V I E P + D
Sbjct: 404 QDKEVLTAIEKRFEVPIPEFPKDGID 429
>ZFIN|ZDB-GENE-040426-2902 [details] [associations]
symbol:ddx39ab "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Ab" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-2902 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOVERGEN:HBG107334 KO:K13182 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 OMA:WANCVIS CTD:7919 EMBL:FP101915
EMBL:BC044169 EMBL:BC067555 EMBL:BC128804 EMBL:BX248081
IPI:IPI00631848 RefSeq:NP_998142.1 UniGene:Dr.75872 SMR:Q803W0
STRING:Q803W0 Ensembl:ENSDART00000019957 GeneID:406249
KEGG:dre:406249 InParanoid:Q803W0 NextBio:20817884 Uniprot:Q803W0
Length = 427
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 145/382 (37%), Positives = 220/382 (57%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+D++ QA+SG GKTA
Sbjct: 37 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTA 96
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVRED 151
F LQQ++ Q LV+ TRELA QI K YM VKV GG S+++D
Sbjct: 97 VFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKD 156
Query: 152 QRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L H+VVGTPGR+ ++R ++L ++ FVLDE D+ML + + + DIF+
Sbjct: 157 EDVLKKSCPHIVVGTPGRILALVRNKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRL 216
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + Q +FSAT+ E + RKFM P+ + V + +LTL G++Q++ + K+ K
Sbjct: 217 TPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKL-KDNEKNR 275
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + ++ L+ + ++ A H M Q R ++F+
Sbjct: 276 KLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDF 335
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+AI FV+ + D
Sbjct: 336 QRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETD 395
Query: 389 -RMLADIQRFYNVVIEELPANV 409
++L D+Q + V + ELP +
Sbjct: 396 AKILNDVQDRFEVNVAELPEEI 417
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 140/377 (37%), Positives = 221/377 (58%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F +GL LL+ + GFE P+ IQ+ I +G +++ QA +GTGKTA + +L
Sbjct: 2 EEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVL 61
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159
Q++ + Q L++ PTRELA Q+ + LG Y+ V+ A GG ++ R L GV
Sbjct: 62 QRIQ-RGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGV 120
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
V+VGTPGR+ D + R++ I++ +LDEADEML GF D I I L + Q +F
Sbjct: 121 EVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLF 180
Query: 220 SATMPPEALEITRKFMN--KPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
SAT+P I +KF+ K V+ LV R++ T+ I+Q + + + E K++ L + +
Sbjct: 181 SATLPAPIKTIIKKFLGGYKTVK-LVGREK-TVPAIRQVYYELPETE-KIEGLVSILNSE 237
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
Q+++F T+++VD + +Q+ R + HGDM Q R ++ F++G + +L+ TD
Sbjct: 238 LPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATD 297
Query: 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRF 397
+ ARG+D+ VS VIN+D+P PE+Y+HRIGR+GR GR+G AI + + ++L I+
Sbjct: 298 VAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEA 357
Query: 398 YNVVI--EELPANVADL 412
N + E LP V DL
Sbjct: 358 INKRLKREILPEPV-DL 373
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 140/377 (37%), Positives = 221/377 (58%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F +GL LL+ + GFE P+ IQ+ I +G +++ QA +GTGKTA + +L
Sbjct: 2 EEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVL 61
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159
Q++ + Q L++ PTRELA Q+ + LG Y+ V+ A GG ++ R L GV
Sbjct: 62 QRIQ-RGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGV 120
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
V+VGTPGR+ D + R++ I++ +LDEADEML GF D I I L + Q +F
Sbjct: 121 EVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLF 180
Query: 220 SATMPPEALEITRKFMN--KPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
SAT+P I +KF+ K V+ LV R++ T+ I+Q + + + E K++ L + +
Sbjct: 181 SATLPAPIKTIIKKFLGGYKTVK-LVGREK-TVPAIRQVYYELPETE-KIEGLVSILNSE 237
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
Q+++F T+++VD + +Q+ R + HGDM Q R ++ F++G + +L+ TD
Sbjct: 238 LPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATD 297
Query: 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRF 397
+ ARG+D+ VS VIN+D+P PE+Y+HRIGR+GR GR+G AI + + ++L I+
Sbjct: 298 VAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEA 357
Query: 398 YNVVI--EELPANVADL 412
N + E LP V DL
Sbjct: 358 INKRLKREILPEPV-DL 373
>ZFIN|ZDB-GENE-030131-4275 [details] [associations]
symbol:ddx39aa "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Aa" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-4275 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BC071505
IPI:IPI00510085 UniGene:Dr.1111 ProteinModelPortal:Q6IQA5
SMR:Q6IQA5 STRING:Q6IQA5 PRIDE:Q6IQA5 InParanoid:Q6IQA5
ArrayExpress:Q6IQA5 Bgee:Q6IQA5 Uniprot:Q6IQA5
Length = 427
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 145/382 (37%), Positives = 219/382 (57%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+D++ QA+SG GKTA
Sbjct: 37 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTA 96
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVRED 151
F LQQ++ Q LV+ TRELA QI K YM VK A GG S+++D
Sbjct: 97 VFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMSSVKCAAFFGGMSIKKD 156
Query: 152 QRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L H+VVGTPGR+ + R ++L ++ FVLDE D+ML + + + DIF+
Sbjct: 157 EDVLKKNCPHIVVGTPGRILALSRNKTLTLKNVKHFVLDECDKMLEQLDMRRDVQDIFRL 216
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + Q +FSAT+ E + RKFM P+ + V + +LTL G++Q++V + K+ K
Sbjct: 217 TPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKL-KDSEKNR 275
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + + L+ + ++ A H M Q R ++F+
Sbjct: 276 KLFDLLDVLEFNQVVIFVKSVPRCVALSQLLVEQNFPAIAIHRGMTQEERLSRYQQFKDF 335
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+A+ FV+ + D
Sbjct: 336 QRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVIFVSDETD 395
Query: 389 -RMLADIQRFYNVVIEELPANV 409
++L D+Q + V + ELP +
Sbjct: 396 AKILNDVQDRFEVNVAELPEEI 417
>ZFIN|ZDB-GENE-020419-30 [details] [associations]
symbol:ddx19 "DEAD/H (Asp-Glu-Ala-Asp/His) box
polypeptide 19 (DBP5 homolog, yeast)" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-020419-30 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
HSSP:P10081 EMBL:AY099536 IPI:IPI00481107 RefSeq:NP_775365.1
UniGene:Dr.116877 ProteinModelPortal:Q8JGR1 SMR:Q8JGR1
STRING:Q8JGR1 GeneID:192339 KEGG:dre:192339 CTD:192339
InParanoid:Q8JGR1 NextBio:20797174 ArrayExpress:Q8JGR1
Uniprot:Q8JGR1
Length = 487
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 147/386 (38%), Positives = 225/386 (58%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
SF+ + LK LL+G+YA GF +PS IQ+ + P ++I Q+QS TGKTA F
Sbjct: 101 SFEELRLKPQLLQGVYAMGFNRPSKIQETAL-PMMLAEPPQNLIAQSQSRTGKTAAFVLA 159
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD-YMGVKVHACVGGTSVREDQRILS 156
+L +D E+ + L + PT ELA Q KV+ +G Y V++ + G + ++
Sbjct: 160 MLSHVDTENKWPECLCVCPTYELALQTGKVIEQMGKHYPEVQLVYAIRGNKLERGAKLQE 219
Query: 157 AGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKI 214
+V+GTPG V D ++ + + P I++FVLDEAD M++ +G +DQ I + LP
Sbjct: 220 ---QIVIGTPGTVLDWCQKLKFIDPKKIKVFVLDEADVMIATQGHQDQSVRIQRMLPKTC 276
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT ++ + P I +KR+E TL+ IKQ++V + +E K LC++Y
Sbjct: 277 QMLLFSATFEETVWNFAKRIVPDPNIIKLKREEETLDTIKQYYVICNSKEEKFQALCNIY 336
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 337 GAITIAQAMIFCHTRKTAGWLAGELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLV 396
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 387
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+AIN ++
Sbjct: 397 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMADSKFS 456
Query: 388 DRMLADIQRFYNVVIEELPANVADLI 413
L IQ +N IE+L + D I
Sbjct: 457 MNTLNRIQDHFNKKIEKLDTDDLDEI 482
>ZFIN|ZDB-GENE-080721-12 [details] [associations]
symbol:zgc:193690 "zgc:193690" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-080721-12 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
EMBL:CR846089 IPI:IPI00928637 ProteinModelPortal:F1Q5T4
Ensembl:ENSDART00000134461 ArrayExpress:F1Q5T4 Bgee:F1Q5T4
Uniprot:F1Q5T4
Length = 492
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 148/370 (40%), Positives = 220/370 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
+F+ + LK LL+G+Y GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 85 TFEELRLKPQLLKGVYEMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 143
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD-YMGVKVHACVGGTSVREDQRILS 156
+L +D Q L ++PT ELA Q KV+ +G Y V + V G + RI
Sbjct: 144 MLSHVDPACKWSQCLCISPTYELALQTGKVIEQMGKFYPEVTLAYAVRGHRMERGVRIKD 203
Query: 157 AGVHVVVGTPGRVFDM-LRRQSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKI 214
+V+GTPG V D ++ + + P I++FVLDEAD M++ +G +DQ I + LP
Sbjct: 204 ---QIVIGTPGTVLDWCIKLKLIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKGC 260
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + + + P I +KR+E TL+ IKQ++V + +E K + LC++Y
Sbjct: 261 QMLLFSATFEDSVWKFAERVVPDPNIIKLKREEETLDTIKQYYVLCNSKEDKFNALCNIY 320
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ I Q++IF +TR+ +WL QM H V+ G+M R ++ FR G +VLI
Sbjct: 321 GAITIAQAMIFCHTRKMANWLAGQMSKEGHQVALLSGEMVVEQRAAVIERFRDGKEKVLI 380
Query: 335 TTDLLARGIDVQQVSLVINYDLP----TQPEN--YLHRIGRSGRFGRKGVAINFVTRDDD 388
TT++ ARGIDV+QVS+VIN+DLP + P+N YLHRIGR+GRFG++G+AIN V D
Sbjct: 381 TTNVCARGIDVEQVSVVINFDLPLDKDSNPDNETYLHRIGRTGRFGKRGLAINMV--DSQ 438
Query: 389 RMLADIQRFY 398
R + +I + Y
Sbjct: 439 RSM-EILKTY 447
>UNIPROTKB|J3QL17 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
ChiTaRS:DDX25 Ensembl:ENST00000530414 Uniprot:J3QL17
Length = 468
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 146/371 (39%), Positives = 218/371 (58%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
+F+ + LKE LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 101 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 159
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDY-MGVKVHACVGGTSVREDQRILS 156
+L +++ L Q L LAPT ELA Q +V+ +G + + V+V + G + I
Sbjct: 160 MLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITK 219
Query: 157 AGVHVVVGTPGRVFDMLRRQSLRP-DYIRMFVLDEADEML-SRGFKDQIYDIFQHLPGKI 214
+++GTPG V D + L IR+FVLDEAD M+ ++GF D I + LP +
Sbjct: 220 ---QIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSEC 276
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + + P I ++++ELTL I+Q++V + + K LC++Y
Sbjct: 277 QMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIY 336
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
++ I Q++IF TRR WLT +M H VS G++ R I++ FR G +VLI
Sbjct: 337 GSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLI 396
Query: 335 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDD 388
TT++ ARGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D+
Sbjct: 397 TTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDEL 456
Query: 389 RMLADIQRFYN 399
L IQ ++
Sbjct: 457 PSLMKIQDHFS 467
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 147/378 (38%), Positives = 208/378 (55%)
Query: 37 EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 96
E +F +GLK +L + G+EKPS IQ I G DV+ AQ+G+GKTA F
Sbjct: 3 EFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSL 62
Query: 97 GILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRIL 155
+LQ LD E Q LVLAPTRELA Q+ + M +M GV V A GG R L
Sbjct: 63 PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRAL 122
Query: 156 SAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQ 215
G +VVGTPGR+ D L+R +L + VLDEADEML GF + + I +P Q
Sbjct: 123 RQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQ 182
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYE 275
+FSATMP ITR+FM +P + ++ T I Q + V K + L E
Sbjct: 183 TALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMR-KNEALVRFLE 241
Query: 276 TLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335
++IFV T+ + + + + +A +GDM+Q R+ + + G +LI
Sbjct: 242 AEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIA 301
Query: 336 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQ 395
TD+ ARG+DV+++SLV+NYD+P E+Y+HRIGR+GR GR G A+ FV + R+L +I+
Sbjct: 302 TDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIE 361
Query: 396 RFYNVVIEELPANVADLI 413
R + I E+ A+L+
Sbjct: 362 RTMKLTIPEVELPNAELL 379
>GENEDB_PFALCIPARUM|PFB0445c [details] [associations]
symbol:PFB0445c "helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 489 (177.2 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 108/313 (34%), Positives = 179/313 (57%)
Query: 103 DYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAG--V 159
D + ++C L LA TRELA QI+ Y+ V+ GG S+ + ++
Sbjct: 140 DNKFVRC--LGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHIKLFKEDNIP 197
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQHLPGKIQVGV 218
H+++GTPGR+ ++R + L D I+ FVLDE D+ L + + + IF P K QV
Sbjct: 198 HIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRSDVQKIFISTPLKKQVMF 257
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
FSATM E ++ +KF+ PV I + + +L L G+ Q +V + +++ K L ++ + L
Sbjct: 258 FSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEKD-KTRKLIEILDAL 316
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
Q +IFV + + L + + A HG ++Q R +F+ +R+L++TD
Sbjct: 317 EFNQVIIFVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVSTD 376
Query: 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRM-LADIQR 396
L RGID+++V++VINYD+P ++YLHR+GR+GRFG KG+A+ FV+ +D + L ++Q
Sbjct: 377 LFGRGIDIERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAVTFVSSQEDTLALNEVQT 436
Query: 397 FYNVVIEELPANV 409
+ V I E+P +
Sbjct: 437 RFEVAISEMPNKI 449
Score = 154 (59.3 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 41/96 (42%), Positives = 52/96 (54%)
Query: 12 DARSFDSNM-NNLLSE--EGQDFFVSYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQ 67
D++ N+ NN+L+ +G SY V+ F LK LLR I GFE PS +Q
Sbjct: 23 DSKDVKGNLGNNILNNNNKGGAMRGSYATVHTGGFKDFFLKPELLRAISESGFEHPSEVQ 82
Query: 68 QRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLD 103
Q I G D++ QA+SG GKTA F ILQQLD
Sbjct: 83 QETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLD 118
Score = 41 (19.5 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 24 LSEEGQDFFVSYDEVYDSFDSMGLKENL 51
+ QD V Y++ + DS +K NL
Sbjct: 4 MDHNAQDELVDYEDDENILDSKDVKGNL 31
>UNIPROTKB|Q9TY94 [details] [associations]
symbol:UAP56 "DEAD box helicase, UAP56" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 489 (177.2 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 108/313 (34%), Positives = 179/313 (57%)
Query: 103 DYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAG--V 159
D + ++C L LA TRELA QI+ Y+ V+ GG S+ + ++
Sbjct: 140 DNKFVRC--LGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHIKLFKEDNIP 197
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQHLPGKIQVGV 218
H+++GTPGR+ ++R + L D I+ FVLDE D+ L + + + IF P K QV
Sbjct: 198 HIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRSDVQKIFISTPLKKQVMF 257
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
FSATM E ++ +KF+ PV I + + +L L G+ Q +V + +++ K L ++ + L
Sbjct: 258 FSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEKD-KTRKLIEILDAL 316
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
Q +IFV + + L + + A HG ++Q R +F+ +R+L++TD
Sbjct: 317 EFNQVIIFVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVSTD 376
Query: 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRM-LADIQR 396
L RGID+++V++VINYD+P ++YLHR+GR+GRFG KG+A+ FV+ +D + L ++Q
Sbjct: 377 LFGRGIDIERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAVTFVSSQEDTLALNEVQT 436
Query: 397 FYNVVIEELPANV 409
+ V I E+P +
Sbjct: 437 RFEVAISEMPNKI 449
Score = 154 (59.3 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 41/96 (42%), Positives = 52/96 (54%)
Query: 12 DARSFDSNM-NNLLSE--EGQDFFVSYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQ 67
D++ N+ NN+L+ +G SY V+ F LK LLR I GFE PS +Q
Sbjct: 23 DSKDVKGNLGNNILNNNNKGGAMRGSYATVHTGGFKDFFLKPELLRAISESGFEHPSEVQ 82
Query: 68 QRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLD 103
Q I G D++ QA+SG GKTA F ILQQLD
Sbjct: 83 QETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLD 118
Score = 41 (19.5 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 24 LSEEGQDFFVSYDEVYDSFDSMGLKENL 51
+ QD V Y++ + DS +K NL
Sbjct: 4 MDHNAQDELVDYEDDENILDSKDVKGNL 31
>SGD|S000002242 [details] [associations]
symbol:SUB2 "Component of the TREX complex required for
nuclear mRNA export" species:4932 "Saccharomyces cerevisiae"
[GO:0006406 "mRNA export from nucleus" evidence=IMP;IDA;IPI]
[GO:0000346 "transcription export complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005681 "spliceosomal
complex" evidence=IEA;TAS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IGI;ISA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0000781 "chromosome, telomeric region"
evidence=IPI] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002242 GO:GO:0005524
EMBL:BK006938 GO:GO:0005681 GO:GO:0003723 GO:GO:0006348
GO:GO:0006368 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000781 GO:GO:0004004
GO:GO:0006283 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0031124
GeneTree:ENSGT00660000095549 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:Z74132 EMBL:AY692907 PIR:S67620
RefSeq:NP_010199.1 ProteinModelPortal:Q07478 SMR:Q07478
DIP:DIP-5343N IntAct:Q07478 MINT:MINT-526164 STRING:Q07478
PaxDb:Q07478 PeptideAtlas:Q07478 EnsemblFungi:YDL084W GeneID:851475
KEGG:sce:YDL084W CYGD:YDL084w OMA:NNPLINC NextBio:968777
Genevestigator:Q07478 GermOnline:YDL084W Uniprot:Q07478
Length = 446
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 145/411 (35%), Positives = 223/411 (54%)
Query: 8 GSGFDARSFDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQ 67
G+ A D+N NN + + + +V F LK L R I GFE PS +Q
Sbjct: 33 GAATSATEGDNN-NNTAAGDKKGSYVGIHST--GFKDFLLKPELSRAIIDCGFEHPSEVQ 89
Query: 68 QRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKV 127
Q I G DV+ QA+SG GKTA F LQQLD + +V+ RELA QI
Sbjct: 90 QHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNE 149
Query: 128 MRALGDYM-GVKVHACVGGTSVREDQRILS---AGVHVVVGTPGRVFDMLRRQSLRPDYI 183
YM VK GGT + +D +L H+VV TPGR+ ++R + + ++
Sbjct: 150 YLRFSKYMPDVKTAVFYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSHV 209
Query: 184 RMFVLDEADEMLSR-GFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRIL 242
+ FV+DE D++L + + +IF+ P QV +FSAT+ E I R+F+ P+ I
Sbjct: 210 KNFVIDECDKVLEELDMRRDVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIF 269
Query: 243 VKRD-ELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRS 301
V + +LTL G++Q+++ +++ E K L L + L Q +IFV + + + LT + +
Sbjct: 270 VDDEAKLTLHGLQQYYIKLEERE-KNRKLAQLLDDLEFNQVIIFVKSTTRANELTKLLNA 328
Query: 302 RDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPE 361
+ HG M Q R + F+ R+ ++TD+ RGID+++++L INYDL + +
Sbjct: 329 SNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDLTNEAD 388
Query: 362 NYLHRIGRSGRFGRKGVAINFVT-RDDDRMLADIQRFYNVVIEELPANVAD 411
YLHR+GR+GRFG KG+AI+FV+ ++D+ +LA IQ ++V I E P D
Sbjct: 389 QYLHRVGRAGRFGTKGLAISFVSSKEDEEVLAKIQERFDVKIAEFPEEGID 439
>FB|FBgn0024804 [details] [associations]
symbol:Dbp80 "Dead box protein 80" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0044614 "nuclear pore
cytoplasmic filaments" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AF005239 ProteinModelPortal:O61305 SMR:O61305 PaxDb:O61305
PRIDE:O61305 FlyBase:FBgn0024804 InParanoid:O61305
OrthoDB:EOG4BCC38 Bgee:O61305 GermOnline:CG17023 Uniprot:O61305
Length = 460
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 143/383 (37%), Positives = 227/383 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGI 98
+F+++ LK +LL+GIYA GF PS IQ+ + ++I Q+QSGTGKTA F +
Sbjct: 74 TFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 133
Query: 99 LQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILSA 157
L +++ Q L L+PT ELA Q +V +G + +K+ V G V ++I
Sbjct: 134 LSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEVDRSKKIEE- 192
Query: 158 GVHVVVGTPGRVFDM-LRRQSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKIQ 215
H+++GTPG++ D ++ + I +FVLDEAD M++ +G DQ I + L Q
Sbjct: 193 --HILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKMLNPHCQ 250
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYE 275
+ FSAT E ++ R + P I + R+E +LE IKQ++V EE K + + ++Y
Sbjct: 251 MLFFSATYGKEVMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEGKYNAIQNIYG 310
Query: 276 TLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335
+++ Q++IF +T+R WL +M S H+V+ GD+ R ++ FRSG +VLIT
Sbjct: 311 CISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLIT 370
Query: 336 TDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFVTRDDD- 388
T++L+RGID++Q+ +V+N+DLP E YLHRIGR+GRFG+ G+AIN +T +
Sbjct: 371 TNILSRGIDIEQLQVVVNFDLPVDLDGMADCETYLHRIGRTGRFGKSGIAINLITDEKTM 430
Query: 389 RMLADIQRFYNVVIEELPANVAD 411
++ +DI++ +N IE L + AD
Sbjct: 431 KVCSDIEKHFNKKIEVLNTDSAD 453
>UNIPROTKB|E9PR46 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
ChiTaRS:DDX25 IPI:IPI00984425 Ensembl:ENST00000526875
ArrayExpress:E9PR46 Bgee:E9PR46 Uniprot:E9PR46
Length = 407
Score = 454 (164.9 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 99/238 (41%), Positives = 146/238 (61%)
Query: 183 IRMFVLDEADEML-SRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRI 241
IR+FVLDEAD M+ ++GF D I + LP + Q+ +FSAT + + P I
Sbjct: 165 IRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFAERIIPDPNVI 224
Query: 242 LVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRS 301
++++ELTL I+Q++V + + K LC++Y ++ I Q++IF TRR WLT +M
Sbjct: 225 KLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQ 284
Query: 302 RDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT--- 358
H VS G++ R I++ FR G +VLITT++ ARGIDV+QV++V+N+DLP
Sbjct: 285 DGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQG 344
Query: 359 -QP--ENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
+P E YLHRIGR+GRFG+KG+A N + D+ L IQ +N I++L A D I
Sbjct: 345 EEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFNSSIKQLNAEDMDEI 402
Score = 182 (69.1 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 45/109 (41%), Positives = 66/109 (60%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
+F+ + LKE LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 42 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 100
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDY-MGVKVHACVGG 145
+L +++ L Q L LAPT ELA Q +V+ +G + + V+V + G
Sbjct: 101 MLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRG 149
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 140/375 (37%), Positives = 209/375 (55%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F + + +LR I G+E P+AIQ I G DV+ AQ+GTGKTA F +L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILSAGV 159
++D S QALVL PTRELA Q+ + G Y+ + V GG+S L G
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
VVVGTPGR+ D L R +L + VLDEADEML+ GF D + I P QV +F
Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAI 279
SATMPP +++ K+++ P + K E I Q ++ V + K+D L + E
Sbjct: 194 SATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVAR---KMDALTRVLEVEPF 250
Query: 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLL 339
++FV T++ + + +++R+R + +A GD+ Q R+ + R G +L+ TD+
Sbjct: 251 EAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVA 310
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYN 399
ARG+DV+++S V+NYD+P E+Y+HRIGR+GR GR G A+ FV+ + +L I++
Sbjct: 311 ARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATR 370
Query: 400 VVIEE--LPANVADL 412
+ E LP V D+
Sbjct: 371 QTLTEAQLPT-VEDV 384
>TAIR|locus:2147987 [details] [associations]
symbol:UAP56a "homolog of human UAP56 a" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0009506
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL360314 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ010466 EMBL:AY052303
EMBL:BT001052 EMBL:AK221273 EMBL:AK221708 EMBL:AK226428
IPI:IPI00760330 IPI:IPI00760336 IPI:IPI00760344 PIR:T51343
RefSeq:NP_568244.2 RefSeq:NP_568245.1 UniGene:At.49007
UniGene:At.73904 ProteinModelPortal:Q56XG6 SMR:Q56XG6 IntAct:Q56XG6
STRING:Q56XG6 PRIDE:Q56XG6 EnsemblPlants:AT5G11170.1
EnsemblPlants:AT5G11200.1 GeneID:830986 GeneID:830990
KEGG:ath:AT5G11170 KEGG:ath:AT5G11200 GeneFarm:932 TAIR:At5g11170
InParanoid:Q56XG6 PhylomeDB:Q56XG6 ProtClustDB:CLSN2689601
Genevestigator:Q56XG6 Uniprot:Q56XG6
Length = 427
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 149/381 (39%), Positives = 210/381 (55%)
Query: 35 YDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
Y ++ S F LK LLR I GFE PS +Q I G+DVI QA+SG GKTA
Sbjct: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQ 152
F LQQ++ Q ALVL TRELA QI Y+ KV GG +++ +
Sbjct: 100 FVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHK 159
Query: 153 RILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEML-SRGFKDQIYDIFQHL 210
+L H+VVGTPGRV + R + L +R F+LDE D+ML S + + +IF+
Sbjct: 160 DLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
Query: 211 PGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLDT 269
P QV +FSAT+ E + +KFM P+ I V + +LTL G+ Q ++ + + E K
Sbjct: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEME-KNRK 278
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGS 329
L DL + L Q VIFV + + L + + H M Q R + F+ G
Sbjct: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGH 338
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV-TRDDD 388
R+L+ TDL+ RGID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV + D
Sbjct: 339 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDS 398
Query: 389 RMLADIQRFYNVVIEELPANV 409
+L +Q + V I+ELP +
Sbjct: 399 EVLNQVQERFEVDIKELPEQI 419
>UNIPROTKB|F1MRW7 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:DAAA02007520 IPI:IPI00867090
UniGene:Bt.13425 Ensembl:ENSBTAT00000024914 Uniprot:F1MRW7
Length = 825
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 141/376 (37%), Positives = 217/376 (57%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 100
F+S+ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 64 FESLLLSRPVLEGLRAVGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 122
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
L E+L Q L+LAPTRE+A QI V+ A+G M G++ H +GGT + +D+ L
Sbjct: 123 SLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 181
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG-FKDQIYDIFQHLPGKIQVGV 218
H+ VG+PGR+ ++ L P IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 182 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 241
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKE-------EWKLDTLC 271
SAT P K+M +P + + + +L G+KQ++ V+ E K L
Sbjct: 242 VSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKTQHLQ 301
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSR 331
+L+ + Q+++F N + L D + S+ G+MDQN R M + + R
Sbjct: 302 ELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPAEYISGNMDQNRRLDAMAKLKQFHCR 361
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDDRM 390
VLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R +++ M
Sbjct: 362 VLISTDLTSRGIDAEKVNLVVNLDVPLDCETYMHRIGRAGRFGTLGLTVTYCCRGEEENM 421
Query: 391 LADIQRFYNVVIEELP 406
+ I + + + LP
Sbjct: 422 MMKIAQKCTINLLPLP 437
>WB|WBGene00001840 [details] [associations]
symbol:hel-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0001703 "gastrulation with mouth
forming first" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0008380
GO:GO:0006397 GO:GO:0010171 GO:GO:0005681 GO:GO:0003723
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:NAENPAI EMBL:Z54327 EMBL:U08102
PIR:T19484 RefSeq:NP_001021985.1 ProteinModelPortal:Q18212
SMR:Q18212 STRING:Q18212 PaxDb:Q18212 PRIDE:Q18212
EnsemblMetazoa:C26D10.2a.1 EnsemblMetazoa:C26D10.2a.2 GeneID:174333
KEGG:cel:CELE_C26D10.2 UCSC:C26D10.2a CTD:174333 WormBase:C26D10.2a
InParanoid:Q18212 NextBio:883586 ArrayExpress:Q18212 GO:GO:0001703
Uniprot:Q18212
Length = 425
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 140/382 (36%), Positives = 219/382 (57%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
+Y ++ S F LK +LR I GFE PS +Q I G+DV+ QA+SG GKTA
Sbjct: 34 TYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTA 93
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQL+ + + + TRELA QI K Y+ GVKV GG ++++D
Sbjct: 94 VFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKD 153
Query: 152 Q-RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG-FKDQIYDIFQH 209
+ R+ + H+VVGTPGR+ + R L+ D ++ FVLDE D+M+ + + +I +
Sbjct: 154 EERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKM 213
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + QV +FSAT+P E + ++FM P+ + V + +LTL G++Q +V + KE K
Sbjct: 214 TPQQKQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKL-KEAEKNR 272
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L +L + L Q VIFV ++ + L + ++ A H M Q R + F+
Sbjct: 273 RLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDF 332
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
R+L+ TDL RG+D+++V++V NYD+P ++YLHR+ R+GRFG KG+AI FV+ ++D
Sbjct: 333 QKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDEND 392
Query: 389 -RMLADIQRFYNVVIEELPANV 409
+ L +Q +++ I ELP +
Sbjct: 393 AKTLNSVQDRFDISITELPEKI 414
>UNIPROTKB|Q9UHI6 [details] [associations]
symbol:DDX20 "Probable ATP-dependent RNA helicase DDX20"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=TAS]
[GO:0005856 "cytoskeleton" evidence=TAS] [GO:0000387 "spliceosomal
snRNP assembly" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0034660 "ncRNA metabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0017053
GO:GO:0005654 GO:GO:0006917 GO:GO:0005856 GO:GO:0003677
GO:GO:0005681 GO:GO:0000244 GO:GO:0000122 GO:GO:0043065
GO:GO:0015030 GO:GO:0034660 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AF171063 EMBL:AF106019 EMBL:AK001506
EMBL:AL049557 EMBL:BC011556 EMBL:AL133598 IPI:IPI00005904
PIR:T43476 RefSeq:NP_009135.4 UniGene:Hs.591405 PDB:2OXC PDB:3B7G
PDBsum:2OXC PDBsum:3B7G ProteinModelPortal:Q9UHI6 SMR:Q9UHI6
DIP:DIP-32606N IntAct:Q9UHI6 MINT:MINT-96973 STRING:Q9UHI6
PhosphoSite:Q9UHI6 DMDM:12643886 PaxDb:Q9UHI6 PeptideAtlas:Q9UHI6
PRIDE:Q9UHI6 DNASU:11218 Ensembl:ENST00000369702 GeneID:11218
KEGG:hsa:11218 UCSC:uc001ebs.3 CTD:11218 GeneCards:GC01P112298
HGNC:HGNC:2743 HPA:CAB015427 HPA:HPA005516 HPA:HPA023541 MIM:606168
neXtProt:NX_Q9UHI6 PharmGKB:PA27209 HOGENOM:HOG000112184
HOVERGEN:HBG051330 InParanoid:Q9UHI6 KO:K13131 OMA:VEDYEHY
OrthoDB:EOG4SF95N PhylomeDB:Q9UHI6 EvolutionaryTrace:Q9UHI6
GenomeRNAi:11218 NextBio:42699 ArrayExpress:Q9UHI6 Bgee:Q9UHI6
CleanEx:HS_DDX20 Genevestigator:Q9UHI6 GermOnline:ENSG00000064703
Uniprot:Q9UHI6
Length = 824
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 141/376 (37%), Positives = 217/376 (57%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 100
F+S+ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 122
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
L E+L Q L+LAPTRE+A QI V+ A+G M G++ H +GGT + +D+ L
Sbjct: 123 SLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 181
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG-FKDQIYDIFQHLPGKIQVGV 218
H+ VG+PGR+ ++ L P IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 182 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 241
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKE-------EWKLDTLC 271
SAT P K+M P + + + +L G+KQ++ V+ E K L
Sbjct: 242 VSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKVFEEKTQHLQ 301
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSR 331
+L+ + Q+++F N + L D + S+ G+M+QN R M + + R
Sbjct: 302 ELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKHFHCR 361
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDDRM 390
VLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R +++ M
Sbjct: 362 VLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENM 421
Query: 391 LADIQRFYNVVIEELP 406
+ I + N+ + LP
Sbjct: 422 MMRIAQKCNINLLPLP 437
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 142/372 (38%), Positives = 212/372 (56%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF ++ L +L I G+ KP+AIQQ+ I G D+I AQ+GTGKTA+F +L+
Sbjct: 2 SFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLE 61
Query: 101 QLD--YESL-------QCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVRED 151
QL+ Y+ + +AL+L PTRELA Q+E + Y+ + A GG +E
Sbjct: 62 QLNSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQEQ 121
Query: 152 QRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLP 211
++ L GV ++V TPGR+ DM ++ L D + M VLDEAD ML GF D I I + LP
Sbjct: 122 KQRLIWGVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERLP 181
Query: 212 GKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLC 271
Q +FSATM E + ++ ++KPV I + D+ + I+Q+ V VDK K L
Sbjct: 182 EHRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDKAN-KSALLS 240
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSR 331
+ T Q++IF+ T+ L Q+ R + H Q+ R+ I+ +F+SG +
Sbjct: 241 HIITTQNWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIK 300
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRML 391
L+ T + ARG+D+ ++S VINYDLP Q ++Y+HRIGR+GR G G AI+ V++D+ R L
Sbjct: 301 FLVATAIAARGLDIGELSRVINYDLPAQVDDYIHRIGRTGRAGASGEAISLVSKDNFREL 360
Query: 392 ADIQRFYNVVIE 403
I+ +IE
Sbjct: 361 CAIESRLGHIIE 372
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 134/368 (36%), Positives = 211/368 (57%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF + L + + R + G+E P+ +Q I + D++ ++Q+G+GKTA+F + +
Sbjct: 5 SFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE 64
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVH 160
+++E + QALVL PTRELA Q+++ + +G + +K A G + + L H
Sbjct: 65 MVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTH 124
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
+VVGTPGRV D + + +L + ++ V+DEADEML+ GF DQ+ I LP K +FS
Sbjct: 125 IVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFS 184
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
AT+P + ++R +MN P I +K +T + I+ V +EE KL L D+ T+
Sbjct: 185 ATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEE-KLSLLKDV-TTIENP 242
Query: 281 QS-VIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLL 339
S +IF T+ VD + Q+ ++ HG M Q R +M +FR G R L+ TD+
Sbjct: 243 DSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVA 302
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYN 399
ARGID+ ++ VINYD+P + E+Y+HR GR+GR G G AI F+T +DR L +I+ +
Sbjct: 303 ARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRFLEEIEAYIG 362
Query: 400 VVIEELPA 407
I + A
Sbjct: 363 FAIPKANA 370
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 134/368 (36%), Positives = 211/368 (57%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF + L + + R + G+E P+ +Q I + D++ ++Q+G+GKTA+F + +
Sbjct: 5 SFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE 64
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVH 160
+++E + QALVL PTRELA Q+++ + +G + +K A G + + L H
Sbjct: 65 MVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTH 124
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
+VVGTPGRV D + + +L + ++ V+DEADEML+ GF DQ+ I LP K +FS
Sbjct: 125 IVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFS 184
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
AT+P + ++R +MN P I +K +T + I+ V +EE KL L D+ T+
Sbjct: 185 ATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEE-KLSLLKDV-TTIENP 242
Query: 281 QS-VIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLL 339
S +IF T+ VD + Q+ ++ HG M Q R +M +FR G R L+ TD+
Sbjct: 243 DSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVA 302
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYN 399
ARGID+ ++ VINYD+P + E+Y+HR GR+GR G G AI F+T +DR L +I+ +
Sbjct: 303 ARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRFLEEIEAYIG 362
Query: 400 VVIEELPA 407
I + A
Sbjct: 363 FAIPKANA 370
>TAIR|locus:2148027 [details] [associations]
symbol:UAP56b "homolog of human UAP56 b" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GO:GO:0005618 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:At.49007 UniGene:At.73904 GeneID:830990 KEGG:ath:AT5G11200
OMA:LECVINY IPI:IPI00938969 RefSeq:NP_001154706.1
ProteinModelPortal:F4JWF6 SMR:F4JWF6 PRIDE:F4JWF6
EnsemblPlants:AT5G11200.2 Uniprot:F4JWF6
Length = 486
Score = 329 (120.9 bits), Expect = 1.4e-59, Sum P(2) = 1.4e-59
Identities = 88/237 (37%), Positives = 124/237 (52%)
Query: 35 YDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
Y ++ S F LK LLR I GFE PS +Q I G+DVI QA+SG GKTA
Sbjct: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQ 152
F LQQ++ Q ALVL TRELA QI Y+ KV GG +++ +
Sbjct: 100 FVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHK 159
Query: 153 RILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEML-SRGFKDQIYDIFQHL 210
+L H+VVGTPGRV + R + L +R F+LDE D+ML S + + +IF+
Sbjct: 160 DLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
Query: 211 PGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKL 267
P QV +FSAT+ E + +KFM ++ + ++ ++ F V+ EW+L
Sbjct: 220 PHDKQVMMFSATLSKEIRPVCKKFMQD----FLENETVS---VRLFSFGVENSEWRL 269
Score = 301 (111.0 bits), Expect = 1.4e-59, Sum P(2) = 1.4e-59
Identities = 66/174 (37%), Positives = 100/174 (57%)
Query: 238 PVRILVKRD-ELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLT 296
P+ I V + +LTL G+ Q ++ + + E K L DL + L Q VIFV + + L
Sbjct: 306 PMEIYVDDEAKLTLHGLVQHYIKLSEME-KNRKLNDLLDALDFNQVVIFVKSVSRAAELN 364
Query: 297 DQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDL 356
+ + H M Q R + F+ G R+L+ TDL+ RGID+++V++VINYD+
Sbjct: 365 KLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDM 424
Query: 357 PTQPENYLHRIGRSGRFGRKGVAINFV-TRDDDRMLADIQRFYNVVIEELPANV 409
P + YLHR+GR+GRFG KG+AI FV + D +L +Q + V I+ELP +
Sbjct: 425 PDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 478
>UNIPROTKB|F1SBP3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 OMA:VEDYEHY GeneTree:ENSGT00530000062880 EMBL:CU466482
RefSeq:XP_001928579.1 UniGene:Ssc.6364 Ensembl:ENSSSCT00000007430
GeneID:100152786 KEGG:ssc:100152786 Uniprot:F1SBP3
Length = 832
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 140/376 (37%), Positives = 218/376 (57%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 100
F+S+ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 71 FESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 129
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
L E+L Q L+LAPTRE+A QI V+ A+G M G++ H +GGT + +D+ L
Sbjct: 130 SLVLENLSTQILILAPTREIAVQIHSVITAIGVKMEGLECHVFIGGTPLSQDKTRLKK-C 188
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG-FKDQIYDIFQHLPGKIQVGV 218
H+ VG+PGR+ ++ L P IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 189 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 248
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKE-------EWKLDTLC 271
SAT P K+M +P + + + +L G+KQ++ V+ E K L
Sbjct: 249 VSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKIFEEKAQHLQ 308
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSR 331
+L+ + Q+++F N + L D + S+ G+M+QN R M + + R
Sbjct: 309 ELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPAVCISGNMNQNQRLDAMAKLKQFHCR 368
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDDRM 390
VLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R +++ M
Sbjct: 369 VLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENM 428
Query: 391 LADIQRFYNVVIEELP 406
+ I + ++ + LP
Sbjct: 429 MMKIAQKCHINLLLLP 444
>POMBASE|SPAC17G6.14c [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase Uap56"
species:4896 "Schizosaccharomyces pombe" [GO:0000346 "transcription
export complex" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0008380
"RNA splicing" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC17G6.14c GO:GO:0005524 EMBL:CU329670
GO:GO:0008380 GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:D89270 PIR:T37846 PIR:T43199
RefSeq:NP_594261.1 ProteinModelPortal:O13792 SMR:O13792
STRING:O13792 EnsemblFungi:SPAC17G6.14c.1 GeneID:2542433
KEGG:spo:SPAC17G6.14c OMA:DAVEFNQ NextBio:20803490 Uniprot:O13792
Length = 434
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 144/384 (37%), Positives = 219/384 (57%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ + F LK LLR I GFE PS +QQ I G DV+ QA+SG GKTA
Sbjct: 44 SYVGIHSTGFRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTA 103
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQ++ + LVL TRELA QI+ Y+ V+ GG ++++D
Sbjct: 104 VFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIKQD 163
Query: 152 QRIL---SAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEML-SRGFKDQIYDIF 207
S H+VV TPGR+ ++R + L+ + ++ FVLDE D++L S + I ++F
Sbjct: 164 MEAFKDKSKSPHIVVATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVF 223
Query: 208 QHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWK 266
+ P + QV +FSAT+ E I +KFM P+ I V + +LTL G++Q +V ++ E+ K
Sbjct: 224 RATPPQKQVMMFSATLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLE-EKAK 282
Query: 267 LDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFR 326
+ DL ++L Q VIFV + + + L +R + HG + Q R + F+
Sbjct: 283 NRKINDLLDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFK 342
Query: 327 SGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD 386
R+ + TD+ RGID+++V++VINYD+P P++YLHR+GR+GRFG KG+AI F + +
Sbjct: 343 DFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFSSSE 402
Query: 387 DDRMLAD-IQRFYNVVIEELPANV 409
+D + D IQ + V I ELP +
Sbjct: 403 EDSQILDKIQERFEVNITELPDEI 426
>MGI|MGI:1858415 [details] [associations]
symbol:Ddx20 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 20"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006917 "induction
of apoptosis" evidence=IPI] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IDA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1858415 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:CH466608 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11218 HOGENOM:HOG000112184 HOVERGEN:HBG051330
KO:K13131 OMA:VEDYEHY OrthoDB:EOG4SF95N EMBL:AJ250027 EMBL:AF220454
EMBL:BC125471 EMBL:BC137721 IPI:IPI00122400 RefSeq:NP_059093.3
UniGene:Mm.272826 ProteinModelPortal:Q9JJY4 SMR:Q9JJY4
IntAct:Q9JJY4 STRING:Q9JJY4 PhosphoSite:Q9JJY4 PaxDb:Q9JJY4
PRIDE:Q9JJY4 Ensembl:ENSMUST00000090680 GeneID:53975 KEGG:mmu:53975
GeneTree:ENSGT00530000062880 InParanoid:Q059Z6 NextBio:310865
Bgee:Q9JJY4 CleanEx:MM_DDX20 Genevestigator:Q9JJY4
GermOnline:ENSMUSG00000027905 Uniprot:Q9JJY4
Length = 825
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 139/376 (36%), Positives = 216/376 (57%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 100
F+S+ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 123
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
L E+ Q L+LAPTRE+A QI V+ A+G M G++ H +GGT + +D+ L
Sbjct: 124 SLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 182
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG-FKDQIYDIFQHLPGKIQVGV 218
H+ VG+PGR+ ++ L P IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 183 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 242
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKE-------EWKLDTLC 271
SAT P ++M P + + + +L G+KQ++ V+ E K L
Sbjct: 243 VSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQ 302
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSR 331
+L+ + Q+++F N + L D + S+ G+M+QN R M + + R
Sbjct: 303 ELFSKVPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCR 362
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDDRM 390
VLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R +++ M
Sbjct: 363 VLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENM 422
Query: 391 LADIQRFYNVVIEELP 406
+ I + N+ + LP
Sbjct: 423 MMKIAQKCNINLLPLP 438
>UNIPROTKB|F1MAM8 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 GeneTree:ENSGT00530000062880 IPI:IPI00947925
RefSeq:NP_001178640.1 UniGene:Rn.137424 Ensembl:ENSRNOT00000068152
GeneID:84473 KEGG:rno:84473 NextBio:616964 ArrayExpress:F1MAM8
Uniprot:F1MAM8
Length = 824
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 139/376 (36%), Positives = 216/376 (57%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 100
F+S+ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 122
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
L E+ Q L+LAPTRE+A QI V+ A+G M G++ H +GGT + +D+ L
Sbjct: 123 SLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 181
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG-FKDQIYDIFQHLPGKIQVGV 218
H+ VG+PGR+ ++ L P IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 182 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 241
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKE-------EWKLDTLC 271
SAT P ++M P + + + +L G+KQ++ V+ E K L
Sbjct: 242 VSATYPEILANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQ 301
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSR 331
+L+ + Q+++F N + L D + S+ G+M+QN R M + + R
Sbjct: 302 ELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCR 361
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDDRM 390
VLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R +++ M
Sbjct: 362 VLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENM 421
Query: 391 LADIQRFYNVVIEELP 406
+ I + N+ + LP
Sbjct: 422 MMKIAQKCNINLLPLP 437
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 136/368 (36%), Positives = 210/368 (57%)
Query: 38 VY-DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 96
VY +F +G+ E + G + + IQ++ I G D+I QA++GTGKT F
Sbjct: 2 VYLKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVL 61
Query: 97 GILQQLDYESLQCQALVLAPTRELAQQIE-KVMRALGDYMGVKVHACVGGTSVREDQRIL 155
IL+++D ES QAL++APTRELA QI ++ + L + V A GG V + R L
Sbjct: 62 PILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKL 121
Query: 156 SAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQ 215
H+VV TPGR+ D +RR+++ + VLDEAD+ML GF I DI PG Q
Sbjct: 122 KGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQ 181
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYE 275
+FSAT+P + ++ +++M++P I V+ +E+T++ I+Q V + K D L + +
Sbjct: 182 TMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQ-RVIETTDRAKPDALRFVMD 240
Query: 276 TLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335
+VIF T+ + L D ++ + + HGD+ Q R+ +M+ FR + LI
Sbjct: 241 RDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIA 300
Query: 336 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQ 395
TD+ ARG+DV V+ V NYD+P E+Y+HRIGR+GR G G+AI FV D++ L +I+
Sbjct: 301 TDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIE 360
Query: 396 RFYNVVIE 403
+ I+
Sbjct: 361 KTLGAPIQ 368
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 136/368 (36%), Positives = 210/368 (57%)
Query: 38 VY-DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 96
VY +F +G+ E + G + + IQ++ I G D+I QA++GTGKT F
Sbjct: 2 VYLKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVL 61
Query: 97 GILQQLDYESLQCQALVLAPTRELAQQIE-KVMRALGDYMGVKVHACVGGTSVREDQRIL 155
IL+++D ES QAL++APTRELA QI ++ + L + V A GG V + R L
Sbjct: 62 PILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKL 121
Query: 156 SAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQ 215
H+VV TPGR+ D +RR+++ + VLDEAD+ML GF I DI PG Q
Sbjct: 122 KGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQ 181
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYE 275
+FSAT+P + ++ +++M++P I V+ +E+T++ I+Q V + K D L + +
Sbjct: 182 TMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQ-RVIETTDRAKPDALRFVMD 240
Query: 276 TLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335
+VIF T+ + L D ++ + + HGD+ Q R+ +M+ FR + LI
Sbjct: 241 RDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIA 300
Query: 336 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQ 395
TD+ ARG+DV V+ V NYD+P E+Y+HRIGR+GR G G+AI FV D++ L +I+
Sbjct: 301 TDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIE 360
Query: 396 RFYNVVIE 403
+ I+
Sbjct: 361 KTLGAPIQ 368
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 137/356 (38%), Positives = 206/356 (57%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F S+ LK +LR + + G+ + + IQ + G DVI +A++G+GKTA F G+L
Sbjct: 5 AFSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGLLS 64
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
+LD S + QALVL PTRELA Q+ K +R L + +K+ GG L G
Sbjct: 65 RLDALSFRVQALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLEHGA 124
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
HVV+GTPGR+ D LRR SL +R VLDEAD ML GF+D I + P K Q +F
Sbjct: 125 HVVIGTPGRLLDHLRRGSLDLSALRTLVLDEADRMLDMGFQDDISALIAAAPPKRQTLLF 184
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEG-IKQFHVNVDKEEWKLDTLCDLYETLA 278
SAT P ++ +PV + V DE+ EG I+Q VD + +++ + +
Sbjct: 185 SATYPDSIAAMSAGVQREPVEVSV--DEVHGEGAIEQVFYEVDSGQ-RIEAVERILGHYR 241
Query: 279 ITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL 338
++IF NT+ + + + + R + A HGD+DQ RD ++ F + S+ VL+ TD+
Sbjct: 242 PESALIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASVLVATDV 301
Query: 339 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADI 394
ARG+D++++S VINY+L PE + HRIGR+GR G +G+A++ VT + R++A I
Sbjct: 302 AARGLDIKELSAVINYELTRNPEVHTHRIGRTGRAGERGLAVSLVTPRESRLIAAI 357
>WB|WBGene00011580 [details] [associations]
symbol:ddx-19 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007281
"germ cell development" evidence=IGI] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0007281
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00530000063236 HSSP:P10081 EMBL:Z50071
InterPro:IPR025574 Pfam:PF13634 UniGene:Cel.7700 GeneID:174418
KEGG:cel:CELE_T07D4.4 CTD:174418 UCSC:T07D4.4b.1 NextBio:883942
PIR:T24663 RefSeq:NP_495891.1 ProteinModelPortal:Q22308 SMR:Q22308
STRING:Q22308 PRIDE:Q22308 EnsemblMetazoa:T07D4.4a
WormBase:T07D4.4a HOGENOM:HOG000016712 InParanoid:Q22308
OMA:HEGGRFG ArrayExpress:Q22308 Uniprot:Q22308
Length = 1022
Score = 517 (187.1 bits), Expect = 4.9e-59, Sum P(2) = 4.9e-59
Identities = 127/328 (38%), Positives = 187/328 (57%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFC---KGLDVIQQAQSGTGKTATFCSG 97
SF + LK +L+ + F+ P+ IQ+ + P ++I QAQSGTGKTA F
Sbjct: 619 SFRELRLKPEVLKALDTMNFQFPTRIQETAL-PLLLMEPPSNLIAQAQSGTGKTAAFVLT 677
Query: 98 ILQQLDYESLQC-QALVLAPTRELAQQIEKVMRALGDYM-GVKVHACV-GGTSVREDQRI 154
+L ++D +L C Q + LAPT ELA+QI +V+ +G ++ +K+H + GG R
Sbjct: 678 MLCRIDV-NLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRK 736
Query: 155 LSAGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEML-SRGFKD---QIYDIFQH 209
L+ +V+GTPG D L++ + + P IR VLDEAD M+ +GF D IY++ +
Sbjct: 737 LTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVED 794
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDT 269
+Q +FSAT + K + + +++KR+E L IKQF+V + K
Sbjct: 795 ASDSVQSMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAA 854
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGS 329
+ +LY LA+ SVIF +T+ V WL + MR+R H V HGDM R + F+ G
Sbjct: 855 IVNLYSGLAVASSVIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGD 914
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLP 357
+VLITT++ ARGIDV QVS+VINYDLP
Sbjct: 915 FKVLITTNVFARGIDVAQVSVVINYDLP 942
Score = 125 (49.1 bits), Expect = 4.9e-59, Sum P(2) = 4.9e-59
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQP--ENYLHRIGRSGRFGRKGVAINFVTRDDD- 388
V+I DL + D + +V+ D TQP E YLHRIGR+GRFG+ G+AIN + +D
Sbjct: 935 VVINYDLPIKYTD-EGTPMVV--DGFTQPDCETYLHRIGRTGRFGKTGIAINLIDSEDSM 991
Query: 389 RMLADIQRFYNVVIEEL-PANVADL 412
M+ ++ + + I + P+N+ +L
Sbjct: 992 NMINVLENHFQMKIARMDPSNLVEL 1016
>UNIPROTKB|J9NSS1 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063236 CTD:29118 EMBL:AAEX03003382
RefSeq:XP_536532.3 Ensembl:ENSCAFT00000048680 GeneID:479396
KEGG:cfa:479396 Uniprot:J9NSS1
Length = 369
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 140/367 (38%), Positives = 217/367 (59%)
Query: 59 GFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLA 115
GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++ L Q L LA
Sbjct: 2 GFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNTLELFPQCLCLA 60
Query: 116 PTRELAQQIEKVMRALGDY-MGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDM-L 173
PT ELA Q +V+ +G + + V+V + G + + +++GTPG V D
Sbjct: 61 PTYELALQTGRVVERMGKFCVDVQVMYAIRGNHIPRGTDVTK---QIIIGTPGTVLDWCF 117
Query: 174 RRQSLRPDYIRMFVLDEADEML-SRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITR 232
+R+ + IR+FVLDEAD M+ ++GF DQ I + LP + Q+ +FSAT +
Sbjct: 118 KRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSECQMLLFSATFEDSVWQFAE 177
Query: 233 KFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKV 292
+ + P I ++++ELTL I+Q++V + + K LC++Y + I Q++IF TRR
Sbjct: 178 RIIPDPNVIKLRKEELTLSNIRQYYVLCENRKDKYQALCNIYGGITIGQAIIFCQTRRNA 237
Query: 293 DWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 352
WLT +M H VS G++ + R I++ FR G +VLITT++ ARGIDV+QV++V+
Sbjct: 238 KWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVV 297
Query: 353 NYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEEL- 405
N+DLP +P E YLHRIGR+GRFG+KG+A N + D +L IQ +N I++L
Sbjct: 298 NFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQLD 357
Query: 406 PANVADL 412
P ++ ++
Sbjct: 358 PEDMDEI 364
>UNIPROTKB|F1PXG6 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000021679 Uniprot:F1PXG6
Length = 825
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 138/376 (36%), Positives = 216/376 (57%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 100
F+S+ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 66 FESLLLSRPVLDGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 124
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
L E+ Q L+LAPTRE+A QI V+ A+G M G++ H +GGT + +D+ L
Sbjct: 125 SLVLENQSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 183
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG-FKDQIYDIFQHLPGKIQVGV 218
H+ VG+PGR+ ++ L P IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 184 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 243
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKE-------EWKLDTLC 271
SAT P K+M P + + + +L G+KQ++ V+ E K L
Sbjct: 244 VSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHLQ 303
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSR 331
+L+ + Q+++F N + L D + ++ G+M+QN R M + + R
Sbjct: 304 ELFSRIPFNQALVFSNLHSRAQHLADILSAKGFPAECISGNMNQNQRLDAMAKLKHFHCR 363
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDDRM 390
VLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R +++ +
Sbjct: 364 VLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENV 423
Query: 391 LADIQRFYNVVIEELP 406
+ I + N+ + LP
Sbjct: 424 MMKIAQKCNINLLPLP 439
>UNIPROTKB|J9P828 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000050085 Uniprot:J9P828
Length = 825
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 138/376 (36%), Positives = 216/376 (57%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 100
F+S+ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 66 FESLLLSRPVLDGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 124
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
L E+ Q L+LAPTRE+A QI V+ A+G M G++ H +GGT + +D+ L
Sbjct: 125 SLVLENQSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 183
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG-FKDQIYDIFQHLPGKIQVGV 218
H+ VG+PGR+ ++ L P IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 184 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 243
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKE-------EWKLDTLC 271
SAT P K+M P + + + +L G+KQ++ V+ E K L
Sbjct: 244 VSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHLQ 303
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSR 331
+L+ + Q+++F N + L D + ++ G+M+QN R M + + R
Sbjct: 304 ELFSRIPFNQALVFSNLHSRAQHLADILSAKGFPAECISGNMNQNQRLDAMAKLKHFHCR 363
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDDRM 390
VLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R +++ +
Sbjct: 364 VLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENV 423
Query: 391 LADIQRFYNVVIEELP 406
+ I + N+ + LP
Sbjct: 424 MMKIAQKCNINLLPLP 439
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 134/365 (36%), Positives = 204/365 (55%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F ++ L N++ + A G+E+PSAIQQ+ I G D+I QAQ+GTGKTA F IL +
Sbjct: 8 FAALELHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILHR 67
Query: 102 LDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGVH 160
+D + QAL+LAPTRELA Q+ M GV V A GG + + + G
Sbjct: 68 IDPSKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAIRNGAQ 127
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
+VV TPGR+ D LRR + VLDEADEML GF D + IF+ +P Q +FS
Sbjct: 128 IVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPETRQTVLFS 187
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT 280
AT+P I + + P + ++ T+ I+Q H+ V ++ K + L E
Sbjct: 188 ATLPQSIRAIAERHLKDPKHVKIQSKTQTVTAIEQAHLLVHADQ-KTSAVLSLLEVEDFD 246
Query: 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLA 340
++FV T++ L + ++ + +A +GD+ QN R+ ++ + G +++ TD+ A
Sbjct: 247 ALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVVATDVAA 306
Query: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNV 400
RG+DV +++ V N D+P PE+Y+HRIGR+GR GR+G A+ VT + RML I+R
Sbjct: 307 RGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVIERVTGQ 366
Query: 401 VIEEL 405
+ E+
Sbjct: 367 KVAEV 371
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 134/366 (36%), Positives = 205/366 (56%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF+S ++ G+ A G+++P+ IQ + I P +G DVI AQ+GTGKTA + ++Q
Sbjct: 2 SFESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVIQ 61
Query: 101 Q-LDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159
+ L + + LVLAPTRELA QI + R+LG ++ + GG ++ + R L +GV
Sbjct: 62 KMLSTPRGRVRTLVLAPTRELACQIAESFRSLGQRARIRECSIYGGVNMDQQIRRLRSGV 121
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
VVV PGR+ D + R ++ + ++DEAD M GF+ I I + L Q +F
Sbjct: 122 DVVVACPGRLLDHIWRGTIDICGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLLF 181
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAI 279
SATMPPE ++T + PV I + + + V K K L ++ +T
Sbjct: 182 SATMPPEVRKLTLETQTNPVTIQIGT-QAPASSVSHSVYPV-KNHQKTPLLIEILKTTET 239
Query: 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLL 339
+IF T+ + L D++ T ++ G++ QN R +M FR G+ ++L+ TD+
Sbjct: 240 KSVLIFARTKYGAENLADEISRAGFTTASLQGNLSQNRRHAVMEGFRRGNFKILVATDIA 299
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYN 399
ARG+D+ +S VINYD+P PE+Y HRIGR+GRF R G A++ VT D M+ DIQ+ N
Sbjct: 300 ARGLDIDHISHVINYDMPDTPEDYTHRIGRTGRFDRTGQALSLVTGRDGDMVRDIQKLIN 359
Query: 400 VVIEEL 405
I+ L
Sbjct: 360 SPIQRL 365
>UNIPROTKB|E9PSX0 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00554119
Ensembl:ENSRNOT00000020984 ArrayExpress:E9PSX0 Uniprot:E9PSX0
Length = 826
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 139/378 (36%), Positives = 217/378 (57%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 100
F+S+ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 122
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
L E+ Q L+LAPTRE+A QI V+ A+G M G++ H +GGT + +D+ L
Sbjct: 123 SLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 181
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG-FKDQIYDIFQHLPGKIQVGV 218
H+ VG+PGR+ ++ L P IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 182 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 241
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKE-------EWKLDTLC 271
SAT P ++M P + + + +L G+KQ++ V+ E K L
Sbjct: 242 VSATYPEILANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQ 301
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSAT--HGDMDQNSRDIIMREFRSGS 329
+L+ + Q+++F N + L D + S+ +G+M+QN R M + +
Sbjct: 302 ELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNGNMNQNQRLDAMAKLKQFH 361
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDD 388
RVLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R +++
Sbjct: 362 CRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEE 421
Query: 389 RMLADIQRFYNVVIEELP 406
M+ I + N+ + LP
Sbjct: 422 NMMMKIAQKCNINLLPLP 439
>UNIPROTKB|H9KYU4 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 OMA:WHFAERI EMBL:AADN02053079
Ensembl:ENSGALT00000000632 Uniprot:H9KYU4
Length = 416
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 143/383 (37%), Positives = 217/383 (56%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 97
+F+ + LK+ LL+G+Y GF +PS IQ + P ++I Q+QSGTGKTA F
Sbjct: 31 TFEELHLKKELLQGVYTMGFNRPSKIQANAL-PILMAHPPQNLIAQSQSGTGKTAAFVLA 89
Query: 98 ILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRILS 156
+L ++ Q L LAPT ELA QI V +G + ++V V G V +L
Sbjct: 90 MLSRVKGAERYPQCLCLAPTYELALQIGHVAEKMGRFCNDIRVTYAVQGNRVSPGT-VLE 148
Query: 157 AGVHVVVGTPGRVFDM-LRRQSLRPDYIRMFVLDEADEML-SRGFKDQIYDIFQHLPGKI 214
+V+GTPG + D +R+ L I MFVLDEAD M+ ++GF Q I + LP
Sbjct: 149 E--QIVIGTPGTMLDWCFKRRLLNMRRICMFVLDEADVMIDTQGFSSQSIRIQRALPKDC 206
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q+ +FSAT + + +++P+ I ++++ELTL I+Q++ E K + LC+LY
Sbjct: 207 QMLLFSATFKETLWKFALQIVSRPIIIKLRQEELTLTNIRQYYFVCRNWEQKYEALCNLY 266
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
++ I Q++IF TRR DWL+ +M H V+ ++ R +++ FR G +VLI
Sbjct: 267 GSITIGQAMIFCQTRRSADWLSVKMIQDGHQVAMLTAELSIVQRADVIQRFRDGKEKVLI 326
Query: 335 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDD 388
TT++ ARGIDV QV++V+N+ LP QP E YLHRIGR+GRFG++G+A N V
Sbjct: 327 TTNVCARGIDVAQVTIVVNFGLPINRQKQPDFETYLHRIGRTGRFGKRGIAFNMVDSHSA 386
Query: 389 RMLADIQRFYNVVIEELPANVAD 411
++ I+ + I+ L + D
Sbjct: 387 HLVRCIEEHFQTKIKRLDPDCMD 409
>DICTYBASE|DDB_G0281553 [details] [associations]
symbol:helC "DEAD-box RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0281553 GO:GO:0007275
GO:GO:0005524 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
OMA:PQAICLA HSSP:Q9UHL0 EMBL:AF002677 RefSeq:XP_640633.1
ProteinModelPortal:Q54TF8 EnsemblProtists:DDB0215338 GeneID:8623244
KEGG:ddi:DDB_G0281553 Uniprot:Q54TF8
Length = 465
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 138/379 (36%), Positives = 226/379 (59%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD-VIQQAQSGTGKTATFCSGIL 99
+F+ +GLK LL+G+YA G+ KPS IQ+ + + + +I Q+QSGTGKTA F G+L
Sbjct: 71 TFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLGML 130
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159
+D QA+ ++PT+ELA Q +V+ +G + +K + + + + + +
Sbjct: 131 NCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLLYI--SEIEVPKNVTN--- 185
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLS-RGFKDQIYDIFQHLPGKIQVGV 218
V++GTPG++ + + ++ L +++M VLDEAD ++ + +QI I + LP ++V +
Sbjct: 186 QVIIGTPGKILENVIKKQLSVKFLKMVVLDEADFIVKMKNVPNQIAMINRLLPSNVKVCL 245
Query: 219 FSATMPPEALEITRKFMNKP-VRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
FSAT E+ +K + P I +KR EL++E I Q+ ++ E+ K L D+Y +
Sbjct: 246 FSATFSMGVEELIKKIVQDPYTSIRLKRQELSVEKIHQYFIDCGSEDNKALILSDIYGFI 305
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHG-DMDQNSRDIIMREFRSGSSRVLITT 336
++ QS++FV+T + +M H+VS +G D+ R +++F+ G S+VLITT
Sbjct: 306 SVGQSIVFVHTIATAKSVHQKMVDEGHSVSLLYGKDLTTEERFKQIKDFKDGKSKVLITT 365
Query: 337 DLLARGIDVQQVSLVINYDLPTQ------PENYLHRIGRSGRFGRKGVAINFV-TRDDDR 389
++LARGID+ QVSLVINYD+P P +YLHRIGR GRFGR GVA++FV +
Sbjct: 366 NVLARGIDIPQVSLVINYDVPLDEMGKPDPVHYLHRIGRVGRFGRSGVALSFVYDQQSTN 425
Query: 390 MLADIQRFYNVVIEELPAN 408
L +I V ++EL ++
Sbjct: 426 KLMNISTHLGVPLKELKSS 444
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 135/367 (36%), Positives = 207/367 (56%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF ++GL L + + G++ PS IQ + I G DV+ AQ+GTGKTA F +L+
Sbjct: 2 SFSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 101 QL----DYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILS 156
L +S Q +ALVL PTRELA Q+ + + G Y+ ++ GG + L
Sbjct: 62 LLAKGHKAKSGQTRALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQINKLR 121
Query: 157 AGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQV 216
GV V+V TPGR+ D++++ +++ + + + VLDEAD ML GF I I LP K Q
Sbjct: 122 HGVDVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQN 181
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYET 276
+FSAT E E+ + +N PV I V +KQ+ VDK + K L L +
Sbjct: 182 LMFSATFSDEIRELAKGLVNHPVEISVTPRNAAATTVKQWICPVDKTQ-KSALLIQLIKQ 240
Query: 277 LAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITT 336
Q ++F T+ + L + + + +A HG+ Q +R + +F+SG RVL+ T
Sbjct: 241 ENWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVAT 300
Query: 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQR 396
D+ ARG+D+ Q+ V+N+DLP PE+Y+HRIGR+GR G G A++ V+ ++ ++L DI+R
Sbjct: 301 DIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAVSLVSSEEIKLLKDIER 360
Query: 397 FYNVVIE 403
N V+E
Sbjct: 361 LINRVLE 367
>UNIPROTKB|J3QLN6 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000583802
Uniprot:J3QLN6
Length = 163
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 118/163 (72%), Positives = 133/163 (81%)
Query: 45 MGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 104
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 1 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 60
Query: 105 ESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVR-EDQRILSAGVHVVV 163
+ QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR E Q++ H++V
Sbjct: 61 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 120
Query: 164 GTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDI 206
GTPGRVFDML R+ L P YI+MFVLDEADEMLSRGFKDQIYDI
Sbjct: 121 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDI 163
>DICTYBASE|DDB_G0269932 [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0000348 "mRNA
branch site recognition" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269932
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0005681 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12812 GO:GO:0000348 RefSeq:XP_646415.1
ProteinModelPortal:Q55CR6 SMR:Q55CR6 PRIDE:Q55CR6
EnsemblProtists:DDB0233387 GeneID:8617372 KEGG:ddi:DDB_G0269932
InParanoid:Q55CR6 OMA:GGANMNP ProtClustDB:CLSZ2429041
Uniprot:Q55CR6
Length = 428
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 139/365 (38%), Positives = 206/365 (56%)
Query: 47 LKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYES 106
LK L R I GFE PS +Q I G DVI QA+SG GKTA F LQQ+D
Sbjct: 55 LKPELERVIGDCGFEHPSEVQNECIPQAILGTDVICQAKSGMGKTAVFVLSTLQQIDNNP 114
Query: 107 LQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV-HVVVG 164
LVL TRELA QI Y+ VK GG V+ + ++ ++++G
Sbjct: 115 NGITTLVLCNTRELAYQICDEFDRFTKYLPNVKTAVIYGGIPVQTHKDLIKEKKPNIIIG 174
Query: 165 TPGRVFDMLRRQSLRPDYIRMFVLDEADEML-SRGFKDQIYDIFQHLPGKIQVGVFSATM 223
TPGR+ + +L I+ F+LDE D ML S + + IF+ +P QV +FSAT+
Sbjct: 175 TPGRILQLASEGALSLKEIKQFILDECDTMLESLDMRKDVQKIFKLIPANKQVMMFSATL 234
Query: 224 PPEALEITRKFMNKPVRILVKR-DELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQS 282
I +KFMN P+ I + +LTL G++Q++V + +E+ K L +L ++L Q+
Sbjct: 235 SDTIRPICKKFMNNPLEIYINDGSKLTLHGLQQYYVPITEEQ-KNKKLIELLDSLDFNQA 293
Query: 283 VIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARG 342
VIFV + R+ D L ++ H D+DQ R R+F++ SR+++ T++ RG
Sbjct: 294 VIFVKSVRRADALNKILQDIGFPSICIHRDLDQKDRIEQYRKFKNFESRIMVATNIFGRG 353
Query: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVI 402
ID+++V++VINYD+ + YLHR+GR+GRFG KG+AI+FV +D +L +Q + V I
Sbjct: 354 IDIERVNVVINYDMAESADTYLHRVGRAGRFGTKGLAISFVPSKEDPVLEQVQSKFVVSI 413
Query: 403 EELPA 407
+EL A
Sbjct: 414 KELVA 418
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 133/373 (35%), Positives = 209/373 (56%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SFDS+GL ++LR + G+ +P+ IQQ+ I +G D++ AQ+GTGKTA F +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 101 QLDYESLQCQ------ALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRI 154
L + AL+L PTRELA QI + +R Y+ ++ GG S+
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 155 LSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKI 214
L GV V+V TPGR+ D+ + +++ D + + VLDEAD ML GF I + LP K
Sbjct: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVN-VDKEEWKLDTLCDL 273
Q +FSAT + + K ++ P+ I V R + + Q HV+ VDK+ K + L +
Sbjct: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQ-HVHFVDKKR-KRELLSHM 239
Query: 274 YETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVL 333
Q ++F T+ + L +Q+ +A HG+ Q +R + +F+SG RVL
Sbjct: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299
Query: 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLAD 393
+ TD+ ARG+D++++ V+NY+LP PE+Y+HRIGR+GR G A++ V D+ ++L D
Sbjct: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359
Query: 394 IQRFYNVVIEELP 406
I++ +E+P
Sbjct: 360 IEKLLK---KEIP 369
>TAIR|locus:504955106 [details] [associations]
symbol:emb1138 "embryo defective 1138" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
Uniprot:Q8L7S8
Length = 748
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 148/420 (35%), Positives = 229/420 (54%)
Query: 9 SGFDARSFDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQ 68
S D D + NN+ +++G++ +S + L + L + G IQ+
Sbjct: 80 SDHDEYDLDGDNNNVEADDGEELAIS---------KLSLPQRLEESLEKRGITHLFPIQR 130
Query: 69 RGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-----DYESLQCQA-----LVLAPTR 118
+VP +G D+I +A++GTGKT F I+++L DY + + LVLAPTR
Sbjct: 131 AVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTR 190
Query: 119 ELAQQIEKVMRALGDYMGVKVHACV-GGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQS 177
ELA+Q+EK ++ Y+ CV GG S Q L+ GV VVVGTPGR+ D++ +S
Sbjct: 191 ELAKQVEKEIKESAPYLST---VCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRS 247
Query: 178 LRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNK 237
L+ + VLDEAD+ML+ GF++ + I ++LP K Q +FSATMP ++ RK+++
Sbjct: 248 LKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDN 307
Query: 238 PVRI-LV-KRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAIT-QSVIFVNTRRKVDW 294
P+ I LV +DE EGIK + + K L DL A ++++F T+R D
Sbjct: 308 PLNIDLVGDQDEKLAEGIKLYAIATTSTS-KRTILSDLITVYAKGGKTIVFTQTKRDADE 366
Query: 295 LTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINY 354
++ + S A HGD+ Q+ R+ + FR G VL+ TD+ +RG+D+ V LVI+Y
Sbjct: 367 VSLAL-SNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHY 425
Query: 355 DLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEEL-PANVADLI 413
+LP PE ++HR GR+GR G++G AI T R + ++R E + P V DL+
Sbjct: 426 ELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLL 485
>UNIPROTKB|I3L0H8 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:25628 EMBL:AC012184 ProteinModelPortal:I3L0H8 SMR:I3L0H8
PRIDE:I3L0H8 Ensembl:ENST00000417604 Bgee:I3L0H8 Uniprot:I3L0H8
Length = 447
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 136/345 (39%), Positives = 203/345 (58%)
Query: 79 DVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD-YMGV 137
++I Q+QSGTGKTA F +L +++ Q L L+PT ELA Q KV+ +G Y +
Sbjct: 101 NLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPEL 160
Query: 138 KVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLDEADEMLS 196
K+ V G + Q+I +V+GTPG V D + + + P I++FVLDEAD M++
Sbjct: 161 KLAYAVRGNKLERGQKISE---QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIA 217
Query: 197 -RGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ 255
+G +DQ I + LP Q+ +FSAT + +K + P I +KR+E TL+ IKQ
Sbjct: 218 TQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQ 277
Query: 256 FHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQ 315
++V + K LC+LY + I Q++IF +TR+ WL ++ H V+ G+M
Sbjct: 278 YYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMV 337
Query: 316 NSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGR 369
R ++ FR G +VL+TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR
Sbjct: 338 EQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGR 397
Query: 370 SGRFGRKGVAINFV-TRDDDRMLADIQRFYNVVIEELPANVADLI 413
+GRFG++G+A+N V ++ +L IQ +N IE L + D I
Sbjct: 398 TGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEI 442
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 134/369 (36%), Positives = 209/369 (56%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F + L ++L+ + A G+ +P+ +Q + + +D++ AQ+GTGKTA F LQ
Sbjct: 2 TFAELKLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQ 61
Query: 101 QLDYE----SLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILS 156
+L + LVL PTRELAQQ+ +R G +M V+ A +GG R+LS
Sbjct: 62 RLSSPPQGPGRGPRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGGMPYHAQLRLLS 121
Query: 157 AGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQV 216
A V +V TPGR+ D+L R+SL + + VLDEAD ML GF D + I P Q
Sbjct: 122 APVDFIVATPGRLVDLLDRRSLDLSRLELLVLDEADRMLDMGFSDDVDRIAAASPATRQT 181
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ-FHVNVDKEEWKLDTLCDLYE 275
+F+ATM + + + +P RI + + T E I+Q HV D K L L
Sbjct: 182 LLFTATMDSAMARLAGRLLREPERIDIAGTKTTHEHIEQRLHV-ADDLHHKNRLLRHLIT 240
Query: 276 TLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335
++ +++IF T+R + L +++++ H+ +A HGDM QN+R+ + + G R+L+
Sbjct: 241 DESLRRAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQGRIRLLVA 300
Query: 336 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQ 395
TD+ ARG+DV +S VIN+DLP E+Y+HRIGR+GR G G+AI+F + ++ LA I+
Sbjct: 301 TDVAARGLDVTGISHVINFDLPKFAEDYVHRIGRTGRAGASGIAISFASLNEVNYLARIE 360
Query: 396 RFYNVVIEE 404
R+ + E
Sbjct: 361 RYIGQTLPE 369
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 132/365 (36%), Positives = 198/365 (54%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+SF ++ LK LL + GF + IQ + + KG DVI Q ++G+GKTA F G+L
Sbjct: 4 NSFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVL 63
Query: 100 QQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAG 158
L+ + + QALVL PTRELA Q+ +R LG + +KV GG + L G
Sbjct: 64 SNLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEHG 123
Query: 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGV 218
H++VGTPGR+ D L + + + VLDEAD ML GF++ + I P + Q +
Sbjct: 124 AHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQTLL 183
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLA 278
FSAT P +I + + I V+ T I+Q+ V+ + + L L
Sbjct: 184 FSATYPASIEQIAQSVTRNALMIKVEATHDT-SSIRQYFYKVEGSAARDEALETLLLHHQ 242
Query: 279 ITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL 338
T SV+F NT+R+V + D + +V HGDM+Q RD + +F + S +L+ TD+
Sbjct: 243 PTSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDV 302
Query: 339 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFY 398
ARG+DV + V NYDL PE ++HRIGR+GR G KG+A +F + ++ +A I +
Sbjct: 303 AARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQIDEYM 362
Query: 399 NVVIE 403
++ IE
Sbjct: 363 DIAIE 367
>ZFIN|ZDB-GENE-030131-202 [details] [associations]
symbol:ddx20 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 20" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-202
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:BX664742 IPI:IPI00890438
Ensembl:ENSDART00000087037 Ensembl:ENSDART00000134226
Uniprot:F1R1C1
Length = 789
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 136/370 (36%), Positives = 213/370 (57%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 100
F S+ L + +L G+ A GF++PS IQ + I P + GLD+I QA+SGTGKT F + L
Sbjct: 56 FSSLLLSKPVLEGLSASGFQRPSPIQLKAI-PLGRCGLDLIVQAKSGTGKTCVFTTIALD 114
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
L E+ Q LVLAPTRE+A QI V+ A+G M G++ H +GG + +D++ L
Sbjct: 115 SLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLKK-C 173
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEML----SRGFKDQIYDIFQHLPGKIQ 215
H+ +G+PGR+ ++ +L IR+FVLDEAD++L S F++QI I+ LP Q
Sbjct: 174 HIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANKQ 233
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKE-------EWKLD 268
+ SAT P + ++M +P + + + L G+KQ++ V E K+
Sbjct: 234 MLALSATYPESLAQQLSRYMREPTFVRLNPTDPGLLGLKQYYKIVPSHSLPHKVFEEKVQ 293
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
+L +L+ + Q+++F N + L D + S+ G + Q+ R M + +
Sbjct: 294 SLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLPAVCISGGLSQDQRLEAMWKLKQY 353
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR--D 386
RVLI+TDL +RGID ++V+LVIN D+P E Y+HRIGR+GRFG GVA+ + +
Sbjct: 354 QCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETYMHRIGRAGRFGTLGVAVTYCCHGEE 413
Query: 387 DDRMLADIQR 396
+++M+A Q+
Sbjct: 414 ENKMMAIAQK 423
>UNIPROTKB|J3KS25 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000585024
Uniprot:J3KS25
Length = 188
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 114/165 (69%), Positives = 133/165 (80%)
Query: 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93
+++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTAT
Sbjct: 24 NWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTAT 83
Query: 94 FCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVR-EDQ 152
F ILQQ++ + QALVLAPTRELAQQI+KV+ ALGDYMG HAC+GGT+VR E Q
Sbjct: 84 FAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQ 143
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR 197
++ H++VGTPGRVFDML R+ L P YI+MFVLDEADEMLSR
Sbjct: 144 KLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSR 188
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 137/380 (36%), Positives = 214/380 (56%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F S L LL+ I +++P+ IQ++ I DV+ +AQ+GTGKTA F ILQ
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 101 QLDYESLQ-CQ----ALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL 155
QL S+Q C+ ALVL PTRELAQQ+ K G + V + GG S ++ L
Sbjct: 66 QLI--SVQPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISEL 123
Query: 156 SAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQ 215
GV +++ TPGR+ D+LR +S+ I V DEAD ML GFK++I I Q+LP Q
Sbjct: 124 KVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQ 183
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYE 275
+FSAT + ++++ + +P + + + ++Q VD + K + L
Sbjct: 184 TLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADR-KRELTSFLIG 242
Query: 276 TLAITQSVIFVNTRRKVDWLTDQMRSRDHTVS-ATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ Q ++F T++ D L +M ++D S A HGD Q +R+ + EF+ G R LI
Sbjct: 243 SRNWKQVLVFTRTKQCADDLAKEM-TKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALI 301
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADI 394
TD+ ARGID++ +S VINY+LP E+Y+HRIGR+ R G G+A++ V+ ++ +L I
Sbjct: 302 ATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAI 361
Query: 395 QRFYNV-VIEE-LPANVADL 412
+ ++ ++++ LP DL
Sbjct: 362 EELLDIQLLQQWLPGYELDL 381
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 137/380 (36%), Positives = 214/380 (56%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F S L LL+ I +++P+ IQ++ I DV+ +AQ+GTGKTA F ILQ
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 101 QLDYESLQ-CQ----ALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL 155
QL S+Q C+ ALVL PTRELAQQ+ K G + V + GG S ++ L
Sbjct: 66 QLI--SVQPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISEL 123
Query: 156 SAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQ 215
GV +++ TPGR+ D+LR +S+ I V DEAD ML GFK++I I Q+LP Q
Sbjct: 124 KVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQ 183
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYE 275
+FSAT + ++++ + +P + + + ++Q VD + K + L
Sbjct: 184 TLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADR-KRELTSFLIG 242
Query: 276 TLAITQSVIFVNTRRKVDWLTDQMRSRDHTVS-ATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ Q ++F T++ D L +M ++D S A HGD Q +R+ + EF+ G R LI
Sbjct: 243 SRNWKQVLVFTRTKQCADDLAKEM-TKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALI 301
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADI 394
TD+ ARGID++ +S VINY+LP E+Y+HRIGR+ R G G+A++ V+ ++ +L I
Sbjct: 302 ATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAI 361
Query: 395 QRFYNV-VIEE-LPANVADL 412
+ ++ ++++ LP DL
Sbjct: 362 EELLDIQLLQQWLPGYELDL 381
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 137/379 (36%), Positives = 203/379 (53%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F +GL E LL+ + G+E PS IQ + I G DV+ AQ+GTGKTA F +LQ+
Sbjct: 8 FTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQR 67
Query: 102 LD------YESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL 155
L S +AL+L PTRELA QI + + G Y+ + GG + L
Sbjct: 68 LSSSKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQIARL 127
Query: 156 SAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQ 215
GV V+V TPGR+ D+ +++++ + +F+LDEAD ML GF I + LP Q
Sbjct: 128 RQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTALPKDRQ 187
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYE 275
+FSAT PE + + +N P+ I V + T E + Q+ VDK+ K L L +
Sbjct: 188 NLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAEKVTQWLTAVDKKR-KPAVLTHLIK 246
Query: 276 TLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335
Q ++F T+ + LT + + T +A HG+ Q +R + F+ GS ++L+
Sbjct: 247 ENNWQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDGSVKILVA 306
Query: 336 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADI- 394
TD+ ARGID+ + V+N+DLP PE+Y+HRIGR+ R G G A++ V D+ +L I
Sbjct: 307 TDIAARGIDIDLLPQVVNFDLPNVPEDYVHRIGRTARAGNTGQALSLVCADELDLLWGIE 366
Query: 395 ----QRFYNVVIEE-LPAN 408
Q VIE+ +PAN
Sbjct: 367 HVIQQHIERKVIEKFIPAN 385
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 132/377 (35%), Positives = 211/377 (55%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F + L E +++G+ GF + IQ++ + G DV QAQ+GTGKTA F + +
Sbjct: 3 FADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLFTK 62
Query: 102 L-----DYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILS 156
L E +A++LAPTREL QIEK + LG + G + A GG + + L
Sbjct: 63 LLRSGRGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKNALK 122
Query: 157 AGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLP--GKI 214
G VVVGTPGR+ D L+++ I M V+DEAD M GF + I + LP K
Sbjct: 123 EGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRLPPYDKR 182
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q +FSAT+ +E+ +FMN P ++ V +++T E ++Q +V ++E K L L
Sbjct: 183 QNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHVGRKE-KFPLLLGLL 241
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ +++IFVNT+R+ ++L +++ + D GD++Q R I+ +F+SG ++I
Sbjct: 242 RKEGMERTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSGKLPIMI 301
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADI 394
TD+ +RG+ + VS VINYDLP E+Y+HRIGR+ R G +G AI+ D+D +
Sbjct: 302 ATDVASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAISMA--DEDGAF-HL 358
Query: 395 QRFYNVVIEELPANVAD 411
+ + + +++P A+
Sbjct: 359 EAIHEYIKDKIPVEWAE 375
>UNIPROTKB|F1NRN3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00820769
ProteinModelPortal:F1NRN3 Ensembl:ENSGALT00000002285 Uniprot:F1NRN3
Length = 676
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 136/376 (36%), Positives = 212/376 (56%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 100
F S+ L +L G+ A GF +PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 23 FGSLLLSPPVLAGLEAAGFHRPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 81
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
L +S Q L+LAPTRE+A QI V+ +G M G++ H +GGT + +D+ L
Sbjct: 82 ALLLDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDKVRLKK-C 140
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG-FKDQIYDIFQHLPGKIQVGV 218
H+ VG+PGR+ ++ L IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 141 HIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQMLA 200
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKE-------EWKLDTLC 271
SAT P +M +P + + + +L G+KQ++ V+ E K L
Sbjct: 201 VSATYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLPHKTFEEKTQHLQ 260
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSR 331
+L+ + Q+++F N + L + + SR G M+Q+ R M + + R
Sbjct: 261 ELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQSQRLDAMAKLKQFHCR 320
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDDRM 390
VLI+TDL +RGID ++V+LVIN D+P E Y+HRIGR+GRFG G+++ + R +++ M
Sbjct: 321 VLISTDLTSRGIDAEKVNLVINLDVPVDWETYMHRIGRAGRFGTLGLSVTYCCRGEEENM 380
Query: 391 LADIQRFYNVVIEELP 406
+ I + N+ + LP
Sbjct: 381 MMKIAQKCNLQLLPLP 396
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 124/361 (34%), Positives = 202/361 (55%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF ++ L L+ + G+++P+ IQ I DV+ AQ+GTGKTA F ILQ
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 101 ------QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRI 154
Q D+ + +ALVL PTRELA Q+++ ++V GG S+ Q +
Sbjct: 62 LLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAV 121
Query: 155 LSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKI 214
+AG+ V++ TPGR+ D LR+ +L + + V DEAD ML GF D+I + + +P +
Sbjct: 122 FNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQR 181
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q +FSAT+ ++ + P RI V + T I+Q +D + K + + L
Sbjct: 182 QTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDR-KTEFVSHLV 240
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ Q +IF T++ VD LT Q+ + HGD+ Q +R+ +++EF+ G +VL+
Sbjct: 241 RSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLV 300
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADI 394
TD+ ARG+D+ ++ VIN++LP E+Y+HRIGR+GR G G+AI +++D +L ++
Sbjct: 301 ATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEEV 360
Query: 395 Q 395
+
Sbjct: 361 E 361
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 124/361 (34%), Positives = 202/361 (55%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF ++ L L+ + G+++P+ IQ I DV+ AQ+GTGKTA F ILQ
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 101 ------QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRI 154
Q D+ + +ALVL PTRELA Q+++ ++V GG S+ Q +
Sbjct: 62 LLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAV 121
Query: 155 LSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKI 214
+AG+ V++ TPGR+ D LR+ +L + + V DEAD ML GF D+I + + +P +
Sbjct: 122 FNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQR 181
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
Q +FSAT+ ++ + P RI V + T I+Q +D + K + + L
Sbjct: 182 QTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDR-KTEFVSHLV 240
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ Q +IF T++ VD LT Q+ + HGD+ Q +R+ +++EF+ G +VL+
Sbjct: 241 RSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLV 300
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADI 394
TD+ ARG+D+ ++ VIN++LP E+Y+HRIGR+GR G G+AI +++D +L ++
Sbjct: 301 ATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEEV 360
Query: 395 Q 395
+
Sbjct: 361 E 361
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 548 (198.0 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 134/376 (35%), Positives = 202/376 (53%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+FD G + +L + A GF+KP+ IQ +G G D++ A +G+GKT ++C +
Sbjct: 114 TFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIV 173
Query: 101 QLDYESLQCQA-----LVLAPTRELAQQIEKVMRALGDYMGVKVHACV-GGTSVREDQRI 154
++ + L LVLAPTRELA QI+ G ++ + CV GG + R
Sbjct: 174 HINAQPLLAPGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIR-NTCVYGGVPKSQQIRD 232
Query: 155 LSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKI 214
LS G +V+ TPGR+ DML + VLDEAD ML GF+ QI I +
Sbjct: 233 LSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 292
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE-GIKQFHVNVDKEEWKLDTLCDL 273
Q ++SAT P E ++ ++N P+++ V EL+ I Q V V + K D L
Sbjct: 293 QTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQI-VEVVSDFEKRDRLNKY 351
Query: 274 YETLAIT---QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSS 330
ET + +++IF +T+R D +T +R A HGD DQ RD +++EFR+G S
Sbjct: 352 LETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRS 411
Query: 331 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRM 390
+++ TD+ ARGIDV+ ++ VINYD+P E+Y+HRIGR+GR G G AI+F T + +
Sbjct: 412 PIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGL 471
Query: 391 LADIQRFYNVVIEELP 406
A + + +P
Sbjct: 472 GAKLISIMREANQNIP 487
Score = 38 (18.4 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 15 SFDSNMNNLLSEEGQDFFVSYDEVYDSFDS---MGLKENLLRGIYAYGFEKP 63
++D + L + E ++F+V ++ V D DS KEN + I + KP
Sbjct: 62 NWDEELPKLPTFE-KNFYVEHESVRDRSDSEIAQFRKENEMT-ISGHDIPKP 111
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 130/372 (34%), Positives = 203/372 (54%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F ++ LK LL + + G+ + + IQ + + G DVI Q ++G+GKTA F G+L
Sbjct: 2 AFSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLN 61
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
+LD + + Q LVL PTRELA Q+ + +R L + VKV GG + L G
Sbjct: 62 KLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGA 121
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
H++VGTPGR+ D L R L + M VLDEAD ML GF+ Q+ I + P + Q +F
Sbjct: 122 HIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLF 181
Query: 220 SATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
SAT P + I ++ M PV + V ++ T+E Q +D ++ ++ L L
Sbjct: 182 SATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIE---QHFYQLDDDKSRMQALQLLLLEH 238
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
+V+F NT+R+ + D++ +V A HGD++Q RD + +F + S+ VL+ TD
Sbjct: 239 KPESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATD 298
Query: 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRF 397
+ ARG+D+ + V NY + E ++HRIGR+GR G KG A F D +A ++ +
Sbjct: 299 VAARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEY 358
Query: 398 YN--VVIEELPA 407
+ + E LP+
Sbjct: 359 LDREITSESLPS 370
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 130/372 (34%), Positives = 203/372 (54%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F ++ LK LL + + G+ + + IQ + + G DVI Q ++G+GKTA F G+L
Sbjct: 2 AFSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLN 61
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
+LD + + Q LVL PTRELA Q+ + +R L + VKV GG + L G
Sbjct: 62 KLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGA 121
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
H++VGTPGR+ D L R L + M VLDEAD ML GF+ Q+ I + P + Q +F
Sbjct: 122 HIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLF 181
Query: 220 SATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
SAT P + I ++ M PV + V ++ T+E Q +D ++ ++ L L
Sbjct: 182 SATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIE---QHFYQLDDDKSRMQALQLLLLEH 238
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
+V+F NT+R+ + D++ +V A HGD++Q RD + +F + S+ VL+ TD
Sbjct: 239 KPESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATD 298
Query: 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRF 397
+ ARG+D+ + V NY + E ++HRIGR+GR G KG A F D +A ++ +
Sbjct: 299 VAARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEY 358
Query: 398 YN--VVIEELPA 407
+ + E LP+
Sbjct: 359 LDREITSESLPS 370
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 132/367 (35%), Positives = 205/367 (55%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF +GL + L++ + G++KP+ IQ + I +G D+I AQ+GTGKTA+F IL+
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 101 QLDYESLQ----CQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILS 156
+L Q +AL+L PTRELA Q+ + + G G+K A GG + ++ L
Sbjct: 62 KLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
Query: 157 AGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQV 216
GV V+V TPGR+ D+ ++++ + I M VLDEAD ML GF + I I LP ++Q
Sbjct: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYET 276
+FSAT+ + E+ + + P I + ++ + I Q+ + VDK+ K L L
Sbjct: 182 LLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDT-KSALLSHLINE 240
Query: 277 LAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITT 336
Q++IF+ T+ L Q+ R A H Q R ++ +F+SG + L+ T
Sbjct: 241 QQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVAT 300
Query: 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQR 396
+ ARGID+ Q+S V+NYDLP + Y+HRIGR+GR G AI+FV++D+ + L I+
Sbjct: 301 GVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIES 360
Query: 397 FYNVVIE 403
+IE
Sbjct: 361 RLGHLIE 367
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 132/367 (35%), Positives = 205/367 (55%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF +GL + L++ + G++KP+ IQ + I +G D+I AQ+GTGKTA+F IL+
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 101 QLDYESLQ----CQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILS 156
+L Q +AL+L PTRELA Q+ + + G G+K A GG + ++ L
Sbjct: 62 KLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
Query: 157 AGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQV 216
GV V+V TPGR+ D+ ++++ + I M VLDEAD ML GF + I I LP ++Q
Sbjct: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYET 276
+FSAT+ + E+ + + P I + ++ + I Q+ + VDK+ K L L
Sbjct: 182 LLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDT-KSALLSHLINE 240
Query: 277 LAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITT 336
Q++IF+ T+ L Q+ R A H Q R ++ +F+SG + L+ T
Sbjct: 241 QQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVAT 300
Query: 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQR 396
+ ARGID+ Q+S V+NYDLP + Y+HRIGR+GR G AI+FV++D+ + L I+
Sbjct: 301 GVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIES 360
Query: 397 FYNVVIE 403
+IE
Sbjct: 361 RLGHLIE 367
>UNIPROTKB|F1P5C0 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00582962
Ensembl:ENSGALT00000040229 Uniprot:F1P5C0
Length = 753
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 136/378 (35%), Positives = 212/378 (56%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 100
F S+ L +L G+ A GF +PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 7 FGSLLLSPPVLAGLEAAGFHRPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 65
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
L +S Q L+LAPTRE+A QI V+ +G M G++ H +GGT + +D+ L
Sbjct: 66 ALLLDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDKVRLKK-C 124
Query: 160 HVVVGTP--GRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG-FKDQIYDIFQHLPGKIQV 216
H+ VG+P GR+ ++ L IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 125 HIAVGSPDVGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQM 184
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKE-------EWKLDT 269
SAT P +M +P + + + +L G+KQ++ V+ E K
Sbjct: 185 LAVSATYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLPHKTFEEKTQH 244
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGS 329
L +L+ + Q+++F N + L + + SR G M+Q+ R M + +
Sbjct: 245 LQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQSQRLDAMAKLKQFH 304
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDD 388
RVLI+TDL +RGID ++V+LVIN D+P E Y+HRIGR+GRFG G+++ + R +++
Sbjct: 305 CRVLISTDLTSRGIDAEKVNLVINLDVPVDWETYMHRIGRAGRFGTLGLSVTYCCRGEEE 364
Query: 389 RMLADIQRFYNVVIEELP 406
M+ I + N+ + LP
Sbjct: 365 NMMMKIAQKCNLQLLPLP 382
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 133/369 (36%), Positives = 197/369 (53%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F+S +LR I G++K + IQQ+ I +G DV+ AQ+GTGKTA F ILQ+
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 102 L---DYESLQC--QALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILS 156
+ E+L+ + L+L PTRELA Q+ + + A Y+ V GG V + L
Sbjct: 63 MVENPSETLKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLK 122
Query: 157 AGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQV 216
G ++V TPGR+ + L +L + VLDEAD ML GF I I Q + K Q
Sbjct: 123 RGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKKRQN 182
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYET 276
+FSAT ++ + M KP I + T + + Q V++ K + L +L
Sbjct: 183 LLFSATFSSAVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVEQRR-KRELLSELIGK 241
Query: 277 LAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITT 336
Q ++F TR D L ++ HG+ Q SR +REF SG RVL+ T
Sbjct: 242 KNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLVAT 301
Query: 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQR 396
++ ARG+D+ + V+N+DLP E+Y+HRIGR+GR G+ GVAI+FV+R+++R LADI++
Sbjct: 302 EVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADIEK 361
Query: 397 FYNVVIEEL 405
I +
Sbjct: 362 LIGQKIRRI 370
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 136/373 (36%), Positives = 208/373 (55%)
Query: 32 FVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKT 91
F SY + SF+ +GL LLR I G+ +P+ +Q++ I + DV+ AQ+GTGKT
Sbjct: 5 FRSY---FMSFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKT 61
Query: 92 ATFCSGILQQL--DYESLQ------CQALVLAPTRELAQQIEKVMRALGDYMGVKVHACV 143
A F +LQ+L LQ +AL+L PTRELA Q+ + +RA G Y+ +K
Sbjct: 62 AGFTLPLLQRLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVH 121
Query: 144 GGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQI 203
GG S++ L GV ++V TPGR+ D++ + L + FVLDEAD ML GF I
Sbjct: 122 GGVSIKPQINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDI 181
Query: 204 YDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKE 263
I + LP Q +FSAT E E+T K ++ P I V R I VD++
Sbjct: 182 RRILKLLPESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQ 241
Query: 264 EWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMR 323
K + L + + Q ++F T+ + L+ Q+ S + +A HG+ Q +R +
Sbjct: 242 R-KRELLSFMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALT 300
Query: 324 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 383
+F+ G RVL+ TD+ ARG+D+ ++ VIN++LP ++Y+HR+GR+GR GVAI+ V
Sbjct: 301 QFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLV 360
Query: 384 TRDDDRMLADIQR 396
+ D+ R+L DI++
Sbjct: 361 SGDEVRLLRDIEK 373
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 136/373 (36%), Positives = 208/373 (55%)
Query: 32 FVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKT 91
F SY + SF+ +GL LLR I G+ +P+ +Q++ I + DV+ AQ+GTGKT
Sbjct: 5 FRSY---FMSFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKT 61
Query: 92 ATFCSGILQQL--DYESLQ------CQALVLAPTRELAQQIEKVMRALGDYMGVKVHACV 143
A F +LQ+L LQ +AL+L PTRELA Q+ + +RA G Y+ +K
Sbjct: 62 AGFTLPLLQRLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVH 121
Query: 144 GGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQI 203
GG S++ L GV ++V TPGR+ D++ + L + FVLDEAD ML GF I
Sbjct: 122 GGVSIKPQINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDI 181
Query: 204 YDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKE 263
I + LP Q +FSAT E E+T K ++ P I V R I VD++
Sbjct: 182 RRILKLLPESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQ 241
Query: 264 EWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMR 323
K + L + + Q ++F T+ + L+ Q+ S + +A HG+ Q +R +
Sbjct: 242 R-KRELLSFMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALT 300
Query: 324 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 383
+F+ G RVL+ TD+ ARG+D+ ++ VIN++LP ++Y+HR+GR+GR GVAI+ V
Sbjct: 301 QFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLV 360
Query: 384 TRDDDRMLADIQR 396
+ D+ R+L DI++
Sbjct: 361 SGDEVRLLRDIEK 373
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 134/386 (34%), Positives = 209/386 (54%)
Query: 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
++FD G + +L + A GFEKP+AIQ +G G DV+ A++G+GKT ++C +
Sbjct: 140 ETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAI 199
Query: 100 QQLDYESLQCQA-----LVLAPTRELAQQIEKVMRALGDYMGVKVHACV-GGTSVREDQR 153
++ + L L+LAPTRELA QI+ + G ++ + CV GG R
Sbjct: 200 VHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIR-NTCVYGGVPKGPQIR 258
Query: 154 ILSAGVHVVVGTPGRVFDMLR--RQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLP 211
LS GV V + TPGR+ DML R +LR + VLDEAD ML GF+ QI I +
Sbjct: 259 DLSRGVEVCIATPGRLIDMLEAGRTNLRR--VTYLVLDEADRMLDMGFEPQIRKIISQIR 316
Query: 212 GKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEG-IKQFHVNVDKEEWKLDTL 270
Q ++SAT P E ++ F+N +++ + +L+ I Q V V E K D +
Sbjct: 317 PDRQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQI-VEVISEFEKRDRM 375
Query: 271 CDLYETLAITQS---VIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRS 327
E + + ++F T+R D +T +R + HGD Q RD ++ EF++
Sbjct: 376 IKHLEKIMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKT 435
Query: 328 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 387
G S +++ TD+ +RGIDV+ ++ VINYD P E+Y+HRIGR+GR G KG AI F T D+
Sbjct: 436 GKSPIMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDN 495
Query: 388 DRMLADIQRFYNVVIEELPANVADLI 413
+ D+ + +++ +A+++
Sbjct: 496 AKQARDLVTILSEAKQQIDPRLAEMV 521
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 124/370 (33%), Positives = 206/370 (55%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F S+ LK++L++ + + G+E+ + IQ + + KG DVI +A++G+GKTA F +L
Sbjct: 11 AFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGLALLN 70
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
+L+ + + Q++V+ PTRELA Q+ K +R L + +K+ GGT L G
Sbjct: 71 KLEVKKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGSLEHGA 130
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
HV+VGTPGR+ + + + +L+ D + + VLDEAD ML GF+ + +I P Q +F
Sbjct: 131 HVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPLDRQTLLF 190
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAI 279
SAT P + I+ M PV + + E I Q V ++ +LD L L +
Sbjct: 191 SATFPDQIKSISESIMTDPVMVKIASSE-DQSTISQKFFKVGNDDDRLDALRLLLLGNQV 249
Query: 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLL 339
+ IF NT+++ + D + +V A HGD++Q RD + F + S+ +L+ TD+
Sbjct: 250 ESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVATDVA 309
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYN 399
ARG+D+ + LVINY + E ++HRIGR+GR G G+A + + + + ++ +
Sbjct: 310 ARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFSDKESYKVGLLEDYLE 369
Query: 400 VVI--EELPA 407
VI E LP+
Sbjct: 370 AVITPEPLPS 379
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 124/370 (33%), Positives = 206/370 (55%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F S+ LK++L++ + + G+E+ + IQ + + KG DVI +A++G+GKTA F +L
Sbjct: 11 AFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGLALLN 70
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
+L+ + + Q++V+ PTRELA Q+ K +R L + +K+ GGT L G
Sbjct: 71 KLEVKKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGSLEHGA 130
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
HV+VGTPGR+ + + + +L+ D + + VLDEAD ML GF+ + +I P Q +F
Sbjct: 131 HVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPLDRQTLLF 190
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAI 279
SAT P + I+ M PV + + E I Q V ++ +LD L L +
Sbjct: 191 SATFPDQIKSISESIMTDPVMVKIASSE-DQSTISQKFFKVGNDDDRLDALRLLLLGNQV 249
Query: 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLL 339
+ IF NT+++ + D + +V A HGD++Q RD + F + S+ +L+ TD+
Sbjct: 250 ESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVATDVA 309
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYN 399
ARG+D+ + LVINY + E ++HRIGR+GR G G+A + + + + ++ +
Sbjct: 310 ARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFSDKESYKVGLLEDYLE 369
Query: 400 VVI--EELPA 407
VI E LP+
Sbjct: 370 AVITPEPLPS 379
>UNIPROTKB|Q5STU3 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 UniGene:Hs.254042
UniGene:Hs.730849 HGNC:HGNC:13917 EMBL:CR942185 IPI:IPI00790636
SMR:Q5STU3 STRING:Q5STU3 Ensembl:ENST00000376177
Ensembl:ENST00000400293 Ensembl:ENST00000430703
Ensembl:ENST00000438578 Ensembl:ENST00000446341
Ensembl:ENST00000450987 Ensembl:ENST00000453488 Uniprot:Q5STU3
Length = 425
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 130/338 (38%), Positives = 191/338 (56%)
Query: 34 SYDEVYDS-FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
SY ++ S F LK LLR I GFE PS +Q I G+DV+ QA+SG GKTA
Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVRED 151
F LQQL+ + Q LV+ TRELA QI K YM VKV GG S+++D
Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
Query: 152 QRILSAGV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQH 209
+ +L H+VVGTPGR+ + R +SL +I+ F+LDE D+ML + + + +IF+
Sbjct: 158 EEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRM 217
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLD 268
P + QV +FSAT+ E + RKFM P+ I V + +LTL G++Q++V + K+ K
Sbjct: 218 TPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKL-KDNEKNR 276
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L DL + L Q VIFV + ++ L + ++ A H M Q R ++F+
Sbjct: 277 KLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDF 336
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHR 366
R+L+ T+L RG+D+++V++ NYD+P + YLHR
Sbjct: 337 QRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHR 374
>RGD|735141 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0031100 "organ regeneration" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
PROSITE:PS51194 RGD:735141 GO:GO:0005524 GO:GO:0031100
GO:GO:0003743 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG107989 HSSP:P10081 IPI:IPI00369618 UniGene:Rn.91523
EMBL:AF410810 ProteinModelPortal:Q812C4 IntAct:Q812C4 STRING:Q812C4
PRIDE:Q812C4 UCSC:RGD:735141 InParanoid:Q812C4 ArrayExpress:Q812C4
Genevestigator:Q812C4 Uniprot:Q812C4
Length = 138
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 103/138 (74%), Positives = 121/138 (87%)
Query: 186 FVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKR 245
FVLDEADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK+
Sbjct: 1 FVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKK 60
Query: 246 DELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHT 305
+ELTLEGI+QF++NV++EEWKLDTLCDLYETL ITQ+VIF+NTRRKVDWLT++M +RD T
Sbjct: 61 EELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFT 120
Query: 306 VSATHGDMDQNSRDIIMR 323
VSA HGDMDQ RD+IMR
Sbjct: 121 VSAMHGDMDQKERDVIMR 138
>TAIR|locus:2101993 [details] [associations]
symbol:LOS4 "LOW EXPRESSION OF OSMOTICALLY RESPONSIVE
GENES 4" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0009408 "response to heat"
evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0016973 "poly(A)+ mRNA export from nucleus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0006457 "protein folding"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0010286 "heat acclimation" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
[GO:0051604 "protein maturation" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0009737 GO:GO:0005737 GO:GO:0005635 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009409 GO:GO:0009408 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 EMBL:AL132958 eggNOG:COG0513 HOGENOM:HOG000268797
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GO:GO:0016973 EMBL:AY057548 EMBL:BT002444 EMBL:BT008867
IPI:IPI00533725 PIR:T46157 RefSeq:NP_190879.1 UniGene:At.35224
UniGene:At.675 ProteinModelPortal:Q93ZG7 SMR:Q93ZG7 PaxDb:Q93ZG7
PRIDE:Q93ZG7 EnsemblPlants:AT3G53110.1 GeneID:824477
KEGG:ath:AT3G53110 GeneFarm:1014 TAIR:At3g53110 InParanoid:Q93ZG7
OMA:ESATTFE PhylomeDB:Q93ZG7 ProtClustDB:CLSN2684906
Genevestigator:Q93ZG7 GermOnline:AT3G53110 Uniprot:Q93ZG7
Length = 496
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 138/397 (34%), Positives = 226/397 (56%)
Query: 34 SYDEVYDS---FDSMGLKENLLRGIYA-YGFEKPSAIQQRGI----VPFCKGLDVIQQAQ 85
S D Y S F+ + L L++G+Y FEKPS IQ + P K L I QA
Sbjct: 82 SGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHL--IAQAH 139
Query: 86 SGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGG 145
+G+GKT F G+L ++D + QAL + PTRELA Q +V++ +G + G+ V
Sbjct: 140 NGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVPD 199
Query: 146 TSVREDQRILSAGV--HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQ 202
++ A V HVV+GTPG + + + L +++++ V DEAD ML+ GF+D
Sbjct: 200 STRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDD 259
Query: 203 IYDIFQHLPGKI----QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHV 258
I + + G++ QV +FSAT + + + P ++ VKR++L L+ +KQ+ V
Sbjct: 260 SLKIMKDI-GRVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFVKREDLALDSVKQYKV 318
Query: 259 NVDKEEWKLDTLCD-LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNS 317
KE+ K++ + D + E I Q++IFV T+ + + + V++ HG++ ++
Sbjct: 319 VCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESD 378
Query: 318 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT-----QP--ENYLHRIGRS 370
RD I++EF+ ++VLI TD++ARG D Q+V+LV+NY+LPT +P E YLHR+GR+
Sbjct: 379 RDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRA 438
Query: 371 GRFGRKGVAINFVTRD--DDRMLADIQRFYNVVIEEL 405
GRFGRKG N + D D ++ I++++ ++E+
Sbjct: 439 GRFGRKGAVFNLLLDDGWDKEVMEKIEKYFEANVKEI 475
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 134/364 (36%), Positives = 189/364 (51%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F S G + GI A G+E P+ IQ + I G DV+ AQ+GTGKTA F IL +
Sbjct: 3 FKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPILHR 62
Query: 102 LDY-ESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVH 160
L E + +ALV+APTRELA+QI LG ++ GG V + L AG
Sbjct: 63 LQQGERGRVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKAGAE 122
Query: 161 VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220
VVV PGR+ D + + ++ + + VLDEAD+M GF I + +HLP + Q +FS
Sbjct: 123 VVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRRQTLLFS 182
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEW-KLDTLCDLYETLAI 279
ATMP + + + + PV + V + H E+ K L +L
Sbjct: 183 ATMPIDIRTLAQDILVDPVTVQVGT---VAPAVTVAHALYPVEQHLKTPLLLELLRHTDT 239
Query: 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLL 339
+IF T+ + L +Q+ + ++ G++ QN R + FR G+ ++L+ TD+
Sbjct: 240 ESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQILVATDIA 299
Query: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYN 399
ARGIDV QVS VINYD+P E Y+HRIGR+GR R G A VT DD M+ I+R
Sbjct: 300 ARGIDVSQVSHVINYDIPDTAEAYIHRIGRTGRAARSGDAFTLVTSDDGAMVRAIERSLG 359
Query: 400 VVIE 403
IE
Sbjct: 360 APIE 363
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 133/377 (35%), Positives = 209/377 (55%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+ +G+ +++ + + G EK IQ+ + P +G D+I +A++GTGKT F I+
Sbjct: 105 AISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIID 164
Query: 101 QL-DYESLQCQA-----LVLAPTRELAQQIEKVMRALGDYMGVKVHACV-GGTSVREDQR 153
++ Y + + LVLAPTRELA+Q+EK R + C+ GGT + + R
Sbjct: 165 KIIKYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDT---ICLYGGTPIGQQMR 221
Query: 154 ILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGK 213
L GV V VGTPGRV D+++R +L ++ VLDEAD+ML GF + + I + LP K
Sbjct: 222 QLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEK 281
Query: 214 IQVGVFSATMPPEALEITRKFMNKPVRI-LV-KRDELTLEGIKQFHVNVDKEEWKLDTLC 271
Q +FSATMP +T+K++N P+ + LV D+ +GI + + D + +
Sbjct: 282 RQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYG-RASIIG 340
Query: 272 DLY-ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSS 330
L E + ++F T+R D L+ + +R A HGD+ Q+ R+ + FR G
Sbjct: 341 PLVTEHAKGGKCIVFTQTKRDADRLSYAL-ARSFKCEALHGDISQSQRERTLAGFRDGHF 399
Query: 331 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRM 390
+L+ TD+ ARG+DV V L+I+Y+LP E ++HR GR+GR G+KG AI ++D R
Sbjct: 400 NILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRA 459
Query: 391 LADIQRFYNVVIEELPA 407
+ I+R ELP+
Sbjct: 460 VKIIEREVGSRFTELPS 476
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 130/367 (35%), Positives = 201/367 (54%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF S+GL E L+R I A G+ +P+ +QQR I +G D++ AQ+GTGKT F IL+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 101 QL------D----YESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACV-GGTSVR 149
+L D + Q + LVL PTRELA Q+ + + + V AC+ GG +
Sbjct: 62 RLFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKLYARDLKF-VSACIFGGVGMN 120
Query: 150 EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQH 209
+ +S GV V+V PGR+ D+ + S+ ++ + VLDEAD ML GF + +
Sbjct: 121 PQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR 180
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDT 269
LP K Q +FSAT + + K ++ P RI V T+E I+Q + K
Sbjct: 181 LPAKRQNLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVERIEQRVFRLAANH-KRSL 239
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGS 329
L L A Q ++F T+ + L + + A HG+ QN+R + +F++G
Sbjct: 240 LAHLITVGAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALADFKAGD 299
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDR 389
R+++ TD+ ARG+D+ Q+ V+N++LP E+Y+HRIGR+GR GR G AI+ V D+++
Sbjct: 300 VRIMVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEK 359
Query: 390 MLADIQR 396
+L I+R
Sbjct: 360 LLKSIER 366
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 124/366 (33%), Positives = 203/366 (55%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F +GL L++ + G++ P+ IQ + I G +V+ AQ+GTGKTA+F +L +
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 102 L-DYESLQ---CQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSA 157
D ++ ++++L PTRELA Q+E+ + Y+ + A GG ++ L
Sbjct: 63 FADAPKIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 158 GVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVG 217
GV ++V TPGR+ DM ++++R D + + VLDEAD ML GF + I +I + LP + Q
Sbjct: 123 GVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQNL 182
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
+FSAT+ + + + + + I + R I Q+ VDK+ K L L +
Sbjct: 183 LFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDR-KSALLSHLIKEN 241
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
Q++IF+ T+ L Q+ R A H Q R+ ++ +F++G L+ T
Sbjct: 242 NWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATG 301
Query: 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRF 397
+++RGID+ + VINYDLP + ++Y+HRIGR+GR G +G AI+FV++DD R L I+R
Sbjct: 302 VVSRGIDIDALERVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCAIERR 361
Query: 398 YNVVIE 403
+IE
Sbjct: 362 LGHIIE 367
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 124/366 (33%), Positives = 203/366 (55%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F +GL L++ + G++ P+ IQ + I G +V+ AQ+GTGKTA+F +L +
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 102 L-DYESLQ---CQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSA 157
D ++ ++++L PTRELA Q+E+ + Y+ + A GG ++ L
Sbjct: 63 FADAPKIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 158 GVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVG 217
GV ++V TPGR+ DM ++++R D + + VLDEAD ML GF + I +I + LP + Q
Sbjct: 123 GVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQNL 182
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
+FSAT+ + + + + + I + R I Q+ VDK+ K L L +
Sbjct: 183 LFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDR-KSALLSHLIKEN 241
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
Q++IF+ T+ L Q+ R A H Q R+ ++ +F++G L+ T
Sbjct: 242 NWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATG 301
Query: 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRF 397
+++RGID+ + VINYDLP + ++Y+HRIGR+GR G +G AI+FV++DD R L I+R
Sbjct: 302 VVSRGIDIDALERVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCAIERR 361
Query: 398 YNVVIE 403
+IE
Sbjct: 362 LGHIIE 367
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 132/377 (35%), Positives = 208/377 (55%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF +G+ L + G+ P+ +Q I G DV+ A +G+GKTA F +LQ
Sbjct: 10 SFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQ 69
Query: 101 QL------DYESLQCQALVLAPTRELAQQI-EKVMRALGDYMG-VKVHACVGGTSVREDQ 152
+L D + + LVL PTRELAQQ+ + + + G +K+ A GG SV
Sbjct: 70 RLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQM 129
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
+ L AG V+V TPGR+ D+L +L+ + FVLDEAD MLS GF +++ + LP
Sbjct: 130 QSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAALPR 189
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRI-LVKRDELTLEGIKQFHVNVDKEEWKLDTLC 271
+ Q +FSAT P E +T K +++P+ L E T+E Q + V++E+ K L
Sbjct: 190 QKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQESTIE---QRVITVNREQ-KTALLA 245
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSR 331
L + +Q++IFV+ + + L ++ R + HGD Q +R ++ F++G
Sbjct: 246 HLIKQHQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEIS 305
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRML 391
VLI TD+ ARGID+ ++ +VIN+DLP P +Y+HRIGRSGR G G+A+ ++ ++
Sbjct: 306 VLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEEYHHF 365
Query: 392 ADIQRFYNV--VIEELP 406
I++ + V E++P
Sbjct: 366 GVIEKKNKIKLVREQIP 382
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 132/377 (35%), Positives = 208/377 (55%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF +G+ L + G+ P+ +Q I G DV+ A +G+GKTA F +LQ
Sbjct: 10 SFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQ 69
Query: 101 QL------DYESLQCQALVLAPTRELAQQI-EKVMRALGDYMG-VKVHACVGGTSVREDQ 152
+L D + + LVL PTRELAQQ+ + + + G +K+ A GG SV
Sbjct: 70 RLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQM 129
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
+ L AG V+V TPGR+ D+L +L+ + FVLDEAD MLS GF +++ + LP
Sbjct: 130 QSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAALPR 189
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRI-LVKRDELTLEGIKQFHVNVDKEEWKLDTLC 271
+ Q +FSAT P E +T K +++P+ L E T+E Q + V++E+ K L
Sbjct: 190 QKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQESTIE---QRVITVNREQ-KTALLA 245
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSR 331
L + +Q++IFV+ + + L ++ R + HGD Q +R ++ F++G
Sbjct: 246 HLIKQHQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEIS 305
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRML 391
VLI TD+ ARGID+ ++ +VIN+DLP P +Y+HRIGRSGR G G+A+ ++ ++
Sbjct: 306 VLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEEYHHF 365
Query: 392 ADIQRFYNV--VIEELP 406
I++ + V E++P
Sbjct: 366 GVIEKKNKIKLVREQIP 382
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 448 (162.8 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 102/331 (30%), Positives = 168/331 (50%)
Query: 78 LDVIQQAQ-SGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMG 136
LD I +A + T + ++ +AL+L PTRELA Q+ ++ Y+
Sbjct: 60 LDAIAKANHAAKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLP 119
Query: 137 VKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLS 196
+K GG + ++L G+ V+V TPGR+ + L +++ ++ VLDEAD ML
Sbjct: 120 IKSGVVYGGGKMASQTKMLKQGLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLD 179
Query: 197 RGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF 256
GF I + + K Q +FSAT + + + P I V ++ T IKQ
Sbjct: 180 MGFLTDIEKLLLAVKHKHQTLMFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQA 239
Query: 257 HVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQN 316
V EE K + L +L Q ++F T+ + L +++ + HGD Q
Sbjct: 240 VYWVT-EERKRELLSELIGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQG 298
Query: 317 SRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRK 376
+R+ + +F G RVL+ TD+ ARG+D+ ++ V+N+ LP PE+Y+HR+GR+GR G+
Sbjct: 299 ARNKALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTGRAGKS 358
Query: 377 GVAINFVTRDDDRMLADIQRFYNVVIEELPA 407
G AI+ V+ D+R L +I++ E + A
Sbjct: 359 GTAISLVSPKDERFLENIEQLIERKFERIVA 389
Score = 122 (48.0 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
S DS+GL +LL+ + A G++ + IQQ I +G+D++ AQ+GTGKTA F IL
Sbjct: 2 SVDSIGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPILD 61
Query: 101 QL 102
+
Sbjct: 62 AI 63
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 128/370 (34%), Positives = 200/370 (54%)
Query: 37 EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 96
E+ +F +GL LL + G P+ IQQ+ I +G DV+ AQ+GTGKTA F
Sbjct: 3 ELSITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGL 62
Query: 97 GILQ-------QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVR 149
++Q Q + S + +ALVL PTRELAQQ+ ++A +K+ A GGTS++
Sbjct: 63 PLIQRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMK 122
Query: 150 EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQH 209
L GV +++ TPGR+ D +SL + + VLDEAD ML GF + + +
Sbjct: 123 VQLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRR 182
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDT 269
L Q FSAT + + + M P+ + V T E ++Q VDK+ K +
Sbjct: 183 LSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKR-KREL 241
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGS 329
L L + Q ++F TR+ D L ++++ + +GD Q +R + +F++G
Sbjct: 242 LSYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGK 301
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDR 389
R LI TD+ ARG+D+ Q+ V+NYD+P + E+Y+HRIGR+GR G G+A++ ++ D+
Sbjct: 302 VRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQP 361
Query: 390 MLADIQRFYN 399
L I+R N
Sbjct: 362 QLEAIERLLN 371
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 132/368 (35%), Positives = 205/368 (55%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F +GL LL + + +P+ IQ R I G D+I A +G+GKTATF +LQ
Sbjct: 9 TFTELGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIAGANTGSGKTATFALPMLQ 68
Query: 101 QL--DYESLQCQA-------LVLAPTRELAQQIEKVMRALGDYMG--VKVHACVGGTSVR 149
+L D S + LVL PTRELA+Q+ +++ + +K A GG SV
Sbjct: 69 KLREDISSGSKNSKGNFVTGLVLVPTRELAKQVADSIKSYAVHFNGEIKTLAVFGGVSVN 128
Query: 150 EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQH 209
L GV ++V TPGR+ D++ +++ D ++ VLDEAD MLS GF +++ +
Sbjct: 129 IQMLALRGGVDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELTALLAL 188
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRI-LVKRDELTLEGIKQFHVNVDKEEWKLD 268
P K Q +FSAT P + +T++ +N P+ I L D TL + F VN K E K
Sbjct: 189 TPKKKQTLLFSATFPEQVTTLTQELLNNPIEIQLQSADASTLVQ-RVFTVN--KGE-KTA 244
Query: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
L L + Q++IFVN + + L +++ R T + HGD Q+ R ++ F++G
Sbjct: 245 VLAHLIQQEQWRQALIFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQSERSRVLDGFKAG 304
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
VLI TD+ ARG+D++++ +VIN++LP P +Y+HRIGRSGR G G+AI+ + +D
Sbjct: 305 DIEVLIATDIAARGLDIEKLPVVINFNLPRSPSDYMHRIGRSGRAGEVGLAISLIDHEDY 364
Query: 389 RMLADIQR 396
+ I++
Sbjct: 365 HHFSVIEK 372
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 128/370 (34%), Positives = 200/370 (54%)
Query: 37 EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 96
E+ +F +GL LL + G P+ IQQ+ I +G DV+ AQ+GTGKTA F
Sbjct: 3 ELSITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGL 62
Query: 97 GILQ-------QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVR 149
++Q Q + S + +ALVL PTRELAQQ+ ++A +K+ A GGTS++
Sbjct: 63 PLIQRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMK 122
Query: 150 EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQH 209
L GV +++ TPGR+ D +SL + + VLDEAD ML GF + + +
Sbjct: 123 VQLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRR 182
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDT 269
L Q FSAT + + + M P+ + V T E ++Q VDK+ K +
Sbjct: 183 LSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKR-KREL 241
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGS 329
L L + Q ++F TR+ D L ++++ + +GD Q +R + +F++G
Sbjct: 242 LSYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGK 301
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDR 389
R LI TD+ ARG+D+ Q+ V+NYD+P + E+Y+HRIGR+GR G G+A++ ++ D+
Sbjct: 302 VRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQP 361
Query: 390 MLADIQRFYN 399
L I+R N
Sbjct: 362 QLEAIERLLN 371
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 122/354 (34%), Positives = 185/354 (52%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F GL EN+L+ + G+ P+ IQ+ I G DV AQ+GTGKTA F ++Q
Sbjct: 5 TFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQ 64
Query: 101 QLDYESLQCQ---ALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSA 157
+L + + L+L PTRELA Q+ + G Y+ + + +GG S +E + +L
Sbjct: 65 RLSTGRARARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLLQR 124
Query: 158 GVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVG 217
GV V++ TPGR+ D R L + ++DEAD ML GF I I LP Q
Sbjct: 125 GVDVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKLPANRQTL 184
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKL--DTLCDLYE 275
+FSAT P + + + F P +I V R T E I QF V + + K L + E
Sbjct: 185 LFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGKARRTALRRVIE 244
Query: 276 TLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335
+ ++F N + +VD + + H + HGD+ Q+ R ++ FR G ++L+
Sbjct: 245 ATNVKNGIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGKLKLLVA 304
Query: 336 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDR 389
+D+ ARG+D+ V V N+ P + E+Y+HRIGR+GR GR G + VT DD+
Sbjct: 305 SDVAARGLDIPDVGHVFNFGPPPKDEDYVHRIGRTGRAGRTGESYTVVTPADDK 358
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 137/397 (34%), Positives = 203/397 (51%)
Query: 24 LSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQ 83
+S EG+D + F +N+L I GF +P+ IQ +G KG D+I
Sbjct: 153 ISVEGRDV----PKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGI 208
Query: 84 AQSGTGKTATFCSGILQQLDYESLQCQ-----ALVLAPTRELAQQIEKVMRALGDYMGVK 138
A++G+GKT + L + + Q L+LAPTRELA QI++ R G GV+
Sbjct: 209 AETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVR 268
Query: 139 VHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG 198
GG R L GV +V+ TPGR+ DML Q + VLDEAD ML G
Sbjct: 269 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMG 328
Query: 199 FKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTL-EGIKQFH 257
F+ QI I + Q ++SAT P E + R+F+ P + ++ +L + I Q
Sbjct: 329 FEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVI 388
Query: 258 VNVDKEEWKLDTLCDLYETLAITQSV-IFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQN 316
V E K + L L + L + IFV T+R D +T Q+R A HGD Q+
Sbjct: 389 EIVPTPE-KYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQS 447
Query: 317 SRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRK 376
RD ++ EF+SG S ++ TD+ ARG+DV+ + V+NYD P E+Y+HRIGR+GR G K
Sbjct: 448 ERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAK 507
Query: 377 GVAINFVTRDDDRMLADIQRFYNVVIEELPANVADLI 413
G+A F T D+ + ++ + + +P ++ L+
Sbjct: 508 GMAFTFFTHDNAKFARELVKILQEAGQVVPPTLSALV 544
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 135/377 (35%), Positives = 206/377 (54%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+FD G + +L+ + GF KP+ IQ +G G D+I A +G+GKT ++C +
Sbjct: 128 TFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIV 187
Query: 101 QLDYE-SLQCQ----ALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQ-RI 154
++ + LQ LVLAPTRELA QI+ G ++ + CV G + + Q R
Sbjct: 188 HINAQPQLQYGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIR-NTCVYGGAPKGPQIRD 246
Query: 155 LSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKI 214
L+ GV + + TPGR+ DML + VLDEAD ML GF+ QI I +
Sbjct: 247 LARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 306
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEG-IKQFHVNVDKEEWKLDTLCDL 273
Q ++SAT P E ++TR ++N P+++ + EL I Q V V E K D L
Sbjct: 307 QTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQL-VEVIDEFSKRDRLVKH 365
Query: 274 YETLAITQS----VIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGS 329
E+ A+ + ++F +T+R D +T +RS A HGD +QN RD ++ EFR G
Sbjct: 366 LES-ALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGK 424
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDR 389
+ +++ TD+ ARGIDV+ ++ VINYD+P E+Y+HRIGR+GR G G AI+F T + +
Sbjct: 425 TSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSK 484
Query: 390 MLADIQRFYNVVIEELP 406
+ D+ + + +P
Sbjct: 485 LGGDLCKIMREANQTVP 501
>UNIPROTKB|Q4K4K3 [details] [associations]
symbol:dbpA "ATP-independent RNA helicase DbpA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
KEGG:pfl:PFL_5772 PATRIC:19881049
BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
Length = 461
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 121/346 (34%), Positives = 194/346 (56%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F+++ L +L + + G+ + + IQ + + KG+D+I QA++G+GKTA F G+L
Sbjct: 7 AFNTLPLSPAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGLLN 66
Query: 101 QLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGV 159
++ CQALV+ PTRELA Q+ K +R L +KV GG S L G
Sbjct: 67 PINPRYFGCQALVICPTRELADQVAKEVRRLARAEDNIKVLTLCGGVSFGPQIASLEHGA 126
Query: 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVF 219
H++VGTPGR+ LR+ SL D + VLDEAD ML GF D I DI + P + Q +F
Sbjct: 127 HIIVGTPGRIQQHLRKGSLVLDGLNTLVLDEADRMLDMGFYDAIEDIIEKTPSRRQTLLF 186
Query: 220 SATMPPEALEITRKFMNKPVRILVK--RDELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
SAT P ++ KFM P + + D+ +E ++F+ + EE ++ + +
Sbjct: 187 SATYPVGIKQLASKFMRDPQTVKAEAFHDDTQIE--QRFY-EISPEE-RMSAVTKVLHHF 242
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
V F T+++V D + ++ + HGD++Q RD ++ F + S+ VL+ TD
Sbjct: 243 RPASCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVATD 302
Query: 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 383
+ ARG+D+ + +VIN +L E ++HR+GR+GR G KG+A++ V
Sbjct: 303 VAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVSLV 348
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 128/372 (34%), Positives = 212/372 (56%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 100
FD++GL LL I G+++ + +QQ+ ++P G D++ AQ+GTGKTA F +L+
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQ-VIPLALVGKDIMACAQTGTGKTAAFALPVLE 61
Query: 101 QLDYESLQ---CQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSA 157
QL + +ALV+ PTRELA Q+ ++ ++ +K A GG ++ ++ +
Sbjct: 62 QLAAKPADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQ 121
Query: 158 GVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVG 217
GV ++V TPGR+FD++ + +L + V+DEAD ML GF I + + + Q
Sbjct: 122 GVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVHQTM 181
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
+FSAT +++ K +N+P + V + T ++Q VDK K + L +L
Sbjct: 182 LFSATYSDAVKQLSHKMLNQPQWVNVA-ENTTASTVEQLVYRVDKRR-KAELLSELVGRN 239
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
Q ++F +T+ + L ++ + HGD Q +R+ ++ +F++G RVL+ TD
Sbjct: 240 NWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATD 299
Query: 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRF 397
+ ARG+D+Q + LVIN +LP E+Y+HRIGR+GR G G AI+FV+ DD MLA+I+
Sbjct: 300 VAARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEMLAEIEA- 358
Query: 398 YNVVIEELPANV 409
++ E+LP V
Sbjct: 359 --LIGEKLPVTV 368
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 128/365 (35%), Positives = 199/365 (54%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F S+GL +L+ I G+ PS IQ + I G DV+ AQ+GTGKTA F IL+
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 102 L----DYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSA 157
L + Q +AL+L PTRELA QI+ + G ++ +K GG + + +
Sbjct: 63 LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCK 122
Query: 158 GVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVG 217
G ++V TPGR+ D+ + +++ D + + VLDEAD ML GF I+ I + LP K Q
Sbjct: 123 GADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNL 182
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
+FSAT E E+ + +N PV I V T ++Q D ++ K D L L +
Sbjct: 183 LFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKK-KPDMLVKLVKEG 241
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
Q ++F+ T+ + L + + T +A HG+ Q +R + +F++G R+L+ TD
Sbjct: 242 NWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATD 301
Query: 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRF 397
+ ARGID+ Q+ V+N++LP E+Y+HRIGR+GR G G AI+ V+ + L I+R
Sbjct: 302 IAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIERL 361
Query: 398 YNVVI 402
++
Sbjct: 362 TQALL 366
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 128/372 (34%), Positives = 212/372 (56%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 100
FD++GL LL I G+++ + +QQ+ ++P G D++ AQ+GTGKTA F +L+
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQ-VIPLALVGKDIMACAQTGTGKTAAFALPVLE 61
Query: 101 QLDYESLQ---CQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSA 157
QL + +ALV+ PTRELA Q+ ++ ++ +K A GG ++ ++ +
Sbjct: 62 QLAAKPADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQ 121
Query: 158 GVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVG 217
GV ++V TPGR+FD++ + +L + V+DEAD ML GF I + + + Q
Sbjct: 122 GVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVHQTM 181
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
+FSAT +++ K +N+P + V + T ++Q VDK K + L +L
Sbjct: 182 LFSATYSDAVKQLSHKMLNQPQWVNVA-ENTTASTVEQLVYRVDKRR-KAELLSELVGRN 239
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
Q ++F +T+ + L ++ + HGD Q +R+ ++ +F++G RVL+ TD
Sbjct: 240 NWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATD 299
Query: 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRF 397
+ ARG+D+Q + LVIN +LP E+Y+HRIGR+GR G G AI+FV+ DD MLA+I+
Sbjct: 300 VAARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEMLAEIEA- 358
Query: 398 YNVVIEELPANV 409
++ E+LP V
Sbjct: 359 --LIGEKLPVTV 368
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 128/365 (35%), Positives = 199/365 (54%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F S+GL +L+ I G+ PS IQ + I G DV+ AQ+GTGKTA F IL+
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 102 L----DYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSA 157
L + Q +AL+L PTRELA QI+ + G ++ +K GG + + +
Sbjct: 63 LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCK 122
Query: 158 GVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVG 217
G ++V TPGR+ D+ + +++ D + + VLDEAD ML GF I+ I + LP K Q
Sbjct: 123 GADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNL 182
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETL 277
+FSAT E E+ + +N PV I V T ++Q D ++ K D L L +
Sbjct: 183 LFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKK-KPDMLVKLVKEG 241
Query: 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337
Q ++F+ T+ + L + + T +A HG+ Q +R + +F++G R+L+ TD
Sbjct: 242 NWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATD 301
Query: 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRF 397
+ ARGID+ Q+ V+N++LP E+Y+HRIGR+GR G G AI+ V+ + L I+R
Sbjct: 302 IAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIERL 361
Query: 398 YNVVI 402
++
Sbjct: 362 TQALL 366
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 128/379 (33%), Positives = 200/379 (52%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF +G + +L + GF +P+ IQ +G KG D+I A++G+GKT ++ +
Sbjct: 100 SFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIV 159
Query: 101 QLDYESLQCQA-----LVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL 155
++ + + LVLAPTRELA QI++ G +K GG R L
Sbjct: 160 HVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDL 219
Query: 156 SAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQ 215
GV +V+ TPGR+ DM+ + + VLDEAD ML GF QI I H+ Q
Sbjct: 220 QKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQ 279
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE-GIKQFHVNVDKEEWKLDTLCDLY 274
+SAT P E ++++KF+ P ++++ +L I+Q V+V E K + L L
Sbjct: 280 TLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQI-VDVISESQKYNKLVKLL 338
Query: 275 ETLAI-TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVL 333
E + ++ ++F++T++ D +T Q+R + HGD Q RD ++ EFRSG S ++
Sbjct: 339 EDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIM 398
Query: 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLAD 393
TD+ ARG+DV+ V VINYD P E+Y+HRIGR+GR G KG A F T + R +
Sbjct: 399 TATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKE 458
Query: 394 IQRFYNVVIEELPANVADL 412
+ +++ +A +
Sbjct: 459 LTNILQEAGQKVSPELASM 477
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 123/364 (33%), Positives = 193/364 (53%)
Query: 38 VYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG 97
+ F S+GL +L + G+ P+ IQ++ I +G D++ AQ+GTGKT F +
Sbjct: 5 IMSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAP 64
Query: 98 ILQQLDYESLQC-----QALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQ 152
IL +L + + LVLAPTRELA QI G + ++V GG +
Sbjct: 65 ILDRLSRNASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQI 124
Query: 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212
R L G H++V TPGR+ D++ ++++ D + +LDEAD+ML GF + I +++P
Sbjct: 125 RQLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKNVPS 184
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCD 272
K Q FSATMP + F+ P + V T I+Q V++ E K L +
Sbjct: 185 KRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPE-KASLLIE 243
Query: 273 LYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332
+ +++F T+ D + ++ D A HG+ Q+ R+ + F++G +
Sbjct: 244 KIRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPI 303
Query: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLA 392
L+ TD+ ARGI V ++ VINYDLP PE ++HRIGR+ R G GVAI+F +RD+ L
Sbjct: 304 LVATDIAARGIHVDALTHVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDERPTLR 363
Query: 393 DIQR 396
I++
Sbjct: 364 AIEK 367
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 129/367 (35%), Positives = 201/367 (54%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF S+GL E L+ I A G+ +P+ +QQR I +G D++ AQ+GTGKT F IL+
Sbjct: 2 SFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 101 QL------D----YESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACV-GGTSVR 149
+L D + Q + LVL PTRELA Q+ + + V AC+ GG +
Sbjct: 62 RLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKF-VSACIFGGVGMN 120
Query: 150 EDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQH 209
+ ++ GV V+V PGR+ D+ + S+ ++ + VLDEAD ML GF + +
Sbjct: 121 PQVQAMARGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR 180
Query: 210 LPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDT 269
LP K Q +FSAT + ++ K ++ P RI V T+E I+Q + K
Sbjct: 181 LPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASH-KRAL 239
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGS 329
L L A Q ++F T+ + L + + + A HG+ QN+R + +F++G
Sbjct: 240 LAHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFKAGE 299
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDR 389
R+L+ TD+ ARG+D+ Q+ V+N++LP E+Y+HRIGR+GR GR G AI+ V D+++
Sbjct: 300 VRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEK 359
Query: 390 MLADIQR 396
+L I+R
Sbjct: 360 LLKSIER 366
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 120/366 (32%), Positives = 197/366 (53%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F + L E+++ + G+++P+ IQ+ I G D++ AQ+GTGKTA F I+ +
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 102 -----LDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILS 156
+D ++ ++L+L PTRELA QI + + D +G+K GG + +
Sbjct: 64 FGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIE 123
Query: 157 AGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQV 216
G+ ++V TPGR+ D++ + + +FVLDEAD ML GF + I LP Q
Sbjct: 124 LGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQT 183
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYET 276
+FSATMP E + + P +I + + +T++ + Q ++DK K+ L ++
Sbjct: 184 LLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSN-KVPLLFNILTK 242
Query: 277 LAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITT 336
+ +IF T+ D + + T ++ H Q R+ ++ F+ + RVL+ T
Sbjct: 243 ADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRVLVAT 302
Query: 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQR 396
D+ ARGIDV ++LVINY+LP P NY+HRIGR+ R G+ G+AI+F +D R L +I+
Sbjct: 303 DVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISFAVENDIRQLTNIEN 362
Query: 397 FYNVVI 402
VI
Sbjct: 363 SIGQVI 368
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 131/373 (35%), Positives = 207/373 (55%)
Query: 45 MGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-D 103
+G+ +++ + G EK IQ+ + P +G D+I +A++GTGKT F I+ ++
Sbjct: 121 LGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 180
Query: 104 YESLQC-----QALVLAPTRELAQQIEKVMRALGDYMGVKVHACV-GGTSVREDQRILSA 157
+ + Q LVLAPTRELA+Q+EK R + C+ GGT + + R L+
Sbjct: 181 FNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDT---ICLYGGTPIGQQMRELNY 237
Query: 158 GVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVG 217
G+ V VGTPGR+ D+++R +L ++ VLDEAD+ML GF + + I Q LP K Q
Sbjct: 238 GIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSM 297
Query: 218 VFSATMPPEALEITRKFMNKPVRI-LV-KRDELTLEGIKQFHVNVDKEEWKLDTLCDLYE 275
+FSATMP +T+K++N P+ I LV D+ +GI + + D + + L +
Sbjct: 298 MFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYG-RASIIGPLVK 356
Query: 276 TLAIT-QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ ++F T+R D L + ++ + A HGD+ Q R+ + FR G+ +L+
Sbjct: 357 EHGKGGKCIVFTQTKRDADRLAFGL-AKSYKCEALHGDISQAQRERTLAGFRDGNFSILV 415
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADI 394
TD+ ARG+DV V LVI+Y+LP E ++HR GR+GR G+KG AI +D R + I
Sbjct: 416 ATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMI 475
Query: 395 QRFYNVVIEELPA 407
++ ELP+
Sbjct: 476 EKEVGSRFNELPS 488
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 135/397 (34%), Positives = 209/397 (52%)
Query: 12 DARSFDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGI 71
+ F +N N SEE + Y+ V +F+S+G+ ++ GF KP IQ+ I
Sbjct: 96 EIEEFINNTNQKKSEEEEK---KYENV--TFESLGVHPQIIDACNKLGFNKPKEIQRESI 150
Query: 72 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQ-CQALVLAPTRELAQQIEKVMRA 130
KG D+I AQ+G+GKTA F +LQ+L E+ Q L LAPTRELA QI A
Sbjct: 151 PWALKGRDIIGLAQTGSGKTAAFVIPVLQKL-LEAPQGLFCLALAPTRELAYQIADQFNA 209
Query: 131 LGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRR-QSLRPDYIRMFVLD 189
+G +GVK VGG L+ HVVVG+PGRV L + I+ F++D
Sbjct: 210 IGSTIGVKTCVLVGGIDSMSQSLALAKKPHVVVGSPGRVLHHLEHTKGFNLRSIKYFIMD 269
Query: 190 EADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 249
EAD + S F++++ +I + +P + +FSATM + ++ R + PV++ V T
Sbjct: 270 EADRLFSADFEEEVNNILKVIPKERNTYLFSATMTSKVAKLQRASLVNPVKVQVASKYQT 329
Query: 250 LEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSAT 309
++ + Q ++ V + +K L + LA ++IF +T + +R+
Sbjct: 330 VDTLLQQYLFVPFK-YKDCYLAYILNELAGNLTIIFTSTCASSTKIAMMLRNLGFGAIPI 388
Query: 310 HGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGR 369
+GDMDQ R + +F+ G+ +L+ TD+ ARG+D+ V LVINYD+PT + Y+HR+GR
Sbjct: 389 NGDMDQGKRLASLNKFKQGTKSILVATDVAARGLDIPSVDLVINYDVPTNSKEYVHRVGR 448
Query: 370 SGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELP 406
+ R G G AI VT+ D M I+ ++ P
Sbjct: 449 TARAGNSGRAITIVTQYDVEMYQRIEFVLKKKLDSFP 485
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 138/384 (35%), Positives = 199/384 (51%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F + L +L+ I G+E P+ IQ I P +G DV+ AQ+GTGKTA+F ++
Sbjct: 4 FSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMITL 63
Query: 102 LDYESLQCQ---ALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAG 158
L + + +LVL PTRELA Q+ + ++ + +GG S +E ++ G
Sbjct: 64 LARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDALIDRG 123
Query: 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGV 218
V V++ TPGR+ D R L +++ V+DEAD ML GF I IF P Q
Sbjct: 124 VDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTRQTLF 183
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHV-----NVDKEEWK----LDT 269
FSATM PE IT F++ P RI V R E I+Q V D+E + L
Sbjct: 184 FSATMAPEIERITNTFLSAPARIEVARQATASETIEQGVVLFKGSRRDREASEKRAVLRA 243
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGS 329
L D E T ++IF N + VD + ++ + + HGD+DQ+ R + FR G
Sbjct: 244 LIDA-EGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGFREGK 302
Query: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDR 389
R+L+ +D+ ARG+DV VS V N+D+P PE+Y+HRIGR+GR GR G AI D++
Sbjct: 303 LRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGRDGKAITLCIPRDEK 362
Query: 390 MLADIQRFYNVVIEEL--PANVAD 411
L I++ I L PA +
Sbjct: 363 ALDAIEKLIQKDIPRLENPARTEE 386
>UNIPROTKB|H0Y7G4 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CT009531
Ensembl:ENST00000420337 Ensembl:ENST00000426766
Ensembl:ENST00000448800 Uniprot:H0Y7G4
Length = 328
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 121/316 (38%), Positives = 187/316 (59%)
Query: 99 LQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSA 157
LQQL+ + Q LV+ TRELA QI K YM VKV GG S+++D+ +L
Sbjct: 4 LQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKK 63
Query: 158 GV-HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQHLPGKIQ 215
H+VVGTPGR+ + R +SL +I+ F+LDE D+ML + + + +IF+ P + Q
Sbjct: 64 NCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQ 123
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVDKEEWKLDTLCDLY 274
V +FSAT+ E + RKFM P+ I V + +LTL G++Q++V + K+ K L DL
Sbjct: 124 VMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKL-KDNEKNRKLFDLL 182
Query: 275 ETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLI 334
+ L Q VIFV + ++ L + ++ A H M Q R ++F+ R+L+
Sbjct: 183 DVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILV 242
Query: 335 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD-RMLAD 393
T+L RG+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ ++D ++L D
Sbjct: 243 ATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILND 302
Query: 394 IQRFYNVVIEELPANV 409
+Q + V I ELP +
Sbjct: 303 VQDRFEVNISELPDEI 318
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 127/376 (33%), Positives = 204/376 (54%)
Query: 33 VSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
V+ E++ SF +G+ E L G++KP+ IQ I +G DVI A++G+GKT
Sbjct: 72 VTTGEIHTSFKELGVTEVLCEACDQLGWKKPTKIQIEAIPVALQGRDVIGLAETGSGKTG 131
Query: 93 TFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQ 152
F +LQ L + + LVL PTRELA QI + ALG +GVK VGG +
Sbjct: 132 AFAVPVLQSLLACAQRLHTLVLTPTRELAFQIAEQFDALGSSIGVKTAVIVGGIDMMSQA 191
Query: 153 RILSAGVHVVVGTPGRVFD-MLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLP 211
+L+ HVV+ TPGR+ D M + ++ V+DEAD +L+ F+ ++ I + +P
Sbjct: 192 LVLAKKPHVVIATPGRLIDHMENTKGFNLRALKYLVMDEADRILNMDFESEVDKILKVIP 251
Query: 212 GKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLC 271
+ +FSATM + ++ R + PV+ V T++ ++QF++ + + +K L
Sbjct: 252 RDRRTFLFSATMTKKVQKLQRAALQDPVKCSVSSKYATVDKLQQFYIFIPSK-YKDCYLV 310
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSR 331
+ LA ++F T + +R+ T HG M QN R + +F+S S
Sbjct: 311 SILNELAGNSFMVFCGTCNNTQRVALLLRNLGITAIPLHGQMSQNKRLGALNKFKSKSRS 370
Query: 332 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRML 391
VL+ TD+ +RG+D+ V VIN+D+PT ++Y+HR+GR+ R GR G +I FVT+ D +
Sbjct: 371 VLLATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELF 430
Query: 392 ADIQRFYNVVIEELPA 407
QR ++ ++LPA
Sbjct: 431 ---QRIEALIGKKLPA 443
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 547 (197.6 bits), Expect = 4.9e-52, P = 4.9e-52
Identities = 133/370 (35%), Positives = 203/370 (54%)
Query: 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
SF+ L +++ + GF KP+AIQ +G G D++ AQ+G+GKT + +
Sbjct: 238 SFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIV 297
Query: 101 QLDYES--LQCQ---ALVLAPTRELAQQIEKVMRALGDYMGVKV-HACV-GGTSVREDQR 153
+ + ++ + ALVLAPTRELAQQI+ V+R G ++ H C+ GG+S R
Sbjct: 298 HIGNQPPIIRGEGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQAR 357
Query: 154 ILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGK 213
L GV V++ TPGR+ D L ++ VLDEAD ML GF+ QI I + +
Sbjct: 358 DLDRGVEVIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 417
Query: 214 IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE-GIKQFHVNVDKEEWKLDTL-C 271
QV ++SAT P E + F+N ++I + L+ I+Q V + E K L C
Sbjct: 418 RQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQI-VEICTEIEKPQRLVC 476
Query: 272 DLYETLAITQS-------VIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMRE 324
L E I S ++FV T+ KV+ + +R+ + ++ HGD QN RD ++++
Sbjct: 477 LLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKD 536
Query: 325 FRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT 384
FR+G S +LI TD+ +RG+DV+ + VINYD P ENY+HRIGR+GR + G A F T
Sbjct: 537 FRNGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFT 596
Query: 385 RDDDRMLADI 394
D+ + ++
Sbjct: 597 PDNAKQAREL 606
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 144/385 (37%), Positives = 208/385 (54%)
Query: 42 FDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGILQ 100
F + L + +++ I G++ P+AIQ +G G + + A++G+GKT + I+
Sbjct: 283 FSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVH 342
Query: 101 QLDYESLQCQ----ALVLAPTRELAQQIEKVMRALGDYMGVKVHACV-GGTSVREDQRIL 155
+ + LQ ALVLAPTRELAQQI++V G V+ + CV GG R L
Sbjct: 343 INNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVR-NTCVFGGAPKGGQMRDL 401
Query: 156 SAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQ 215
G +V+ TPGR+ D L S VLDEAD ML GF+ QI I + Q
Sbjct: 402 QRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 461
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE-GIKQFHVNV----DKEEWKLDTL 270
++SAT P E ++ F+ ++I + EL+ I+Q V+V KEE KL TL
Sbjct: 462 TLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQV-VDVCDEFSKEE-KLKTL 519
Query: 271 C-DLYETLAIT-QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328
D+Y+T + +IFV T+R+VD L +RS A HGD Q+ RD ++REFRSG
Sbjct: 520 LSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSG 579
Query: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDD 388
S +L+ TD+ ARG+DV + VIN+D P E+Y+HRIGR+GR KG + F T+++
Sbjct: 580 KSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNA 639
Query: 389 RM---LADIQRFYNVVIEELPANVA 410
+ L D+ R N I N+A
Sbjct: 640 KQAKALVDVLREANQEINPALENLA 664
WARNING: HSPs involving 693 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 413 413 0.00080 118 3 11 22 0.36 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 943
No. of states in DFA: 609 (65 KB)
Total size of DFA: 242 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.24u 0.14s 32.38t Elapsed: 00:00:01
Total cpu time: 32.29u 0.14s 32.43t Elapsed: 00:00:01
Start: Fri May 10 03:31:57 2013 End: Fri May 10 03:31:58 2013
WARNINGS ISSUED: 2