Query 015093
Match_columns 413
No_of_seqs 181 out of 2248
Neff 10.8
Searched_HMMs 13730
Date Mon Mar 25 06:33:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015093.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015093hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2j0sa1 c.37.1.19 (A:22-243) P 100.0 1.2E-38 8.7E-43 267.0 22.3 207 37-243 14-220 (222)
2 d1veca_ c.37.1.19 (A:) DEAD bo 100.0 4.2E-37 3.1E-41 255.9 25.6 203 39-241 2-205 (206)
3 d2g9na1 c.37.1.19 (A:21-238) I 100.0 2.4E-37 1.8E-41 259.0 21.2 212 33-244 5-217 (218)
4 d1qdea_ c.37.1.19 (A:) Initiat 100.0 1.1E-36 7.8E-41 254.2 22.8 208 34-242 4-211 (212)
5 d1t6na_ c.37.1.19 (A:) Spliceo 100.0 3E-36 2.2E-40 251.0 24.7 202 41-242 2-206 (207)
6 d1hv8a1 c.37.1.19 (A:3-210) Pu 100.0 2.7E-35 2E-39 245.7 24.3 202 39-242 3-205 (208)
7 d1s2ma1 c.37.1.19 (A:46-251) P 100.0 4E-35 2.9E-39 244.7 23.2 204 40-243 1-204 (206)
8 d1wrba1 c.37.1.19 (A:164-401) 100.0 4.2E-35 3.1E-39 249.0 20.6 209 35-243 16-237 (238)
9 d2bmfa2 c.37.1.14 (A:178-482) 100.0 1.1E-34 8.1E-39 258.9 16.5 273 73-385 5-299 (305)
10 d1q0ua_ c.37.1.19 (A:) Probabl 100.0 5.1E-33 3.7E-37 233.2 20.9 203 41-243 2-208 (209)
11 d1fuka_ c.37.1.19 (A:) Initiat 100.0 4.9E-32 3.6E-36 215.4 19.3 161 253-413 1-161 (162)
12 d2j0sa2 c.37.1.19 (A:244-411) 100.0 4.7E-32 3.5E-36 216.6 18.1 167 247-413 2-168 (168)
13 d1s2ma2 c.37.1.19 (A:252-422) 100.0 1.6E-30 1.2E-34 209.2 19.0 164 248-412 2-165 (171)
14 d2rb4a1 c.37.1.19 (A:307-474) 100.0 1.6E-29 1.2E-33 202.0 18.1 160 249-408 2-167 (168)
15 d1t5ia_ c.37.1.19 (A:) Spliceo 100.0 4.7E-29 3.4E-33 199.5 17.4 156 253-409 2-158 (168)
16 d1hv8a2 c.37.1.19 (A:211-365) 100.0 1.5E-28 1.1E-32 194.4 17.9 153 251-405 2-154 (155)
17 d1oywa3 c.37.1.19 (A:207-406) 99.9 1.3E-26 9.8E-31 189.7 19.0 131 264-394 15-145 (200)
18 d2p6ra3 c.37.1.19 (A:1-202) He 99.9 3E-27 2.2E-31 196.5 13.5 182 47-237 10-194 (202)
19 d1wp9a1 c.37.1.19 (A:1-200) pu 99.9 2E-25 1.4E-29 185.5 19.6 165 62-230 9-173 (200)
20 d1oywa2 c.37.1.19 (A:1-206) Re 99.9 3.2E-27 2.3E-31 197.2 8.0 188 41-239 3-202 (206)
21 d1c4oa2 c.37.1.19 (A:410-583) 99.9 1.7E-24 1.2E-28 170.1 17.0 128 266-394 16-150 (174)
22 d1gkub1 c.37.1.16 (B:1-250) He 99.9 1.9E-24 1.4E-28 184.2 17.9 178 49-236 31-228 (237)
23 d1t5la2 c.37.1.19 (A:415-595) 99.9 2.7E-23 2E-27 166.3 15.7 122 265-387 15-143 (181)
24 d1rifa_ c.37.1.23 (A:) DNA hel 99.9 7.5E-22 5.5E-26 170.9 10.2 153 62-226 113-265 (282)
25 d2fz4a1 c.37.1.19 (A:24-229) D 99.9 3.5E-21 2.6E-25 159.5 13.5 136 62-223 70-205 (206)
26 d1jr6a_ c.37.1.14 (A:) HCV hel 99.8 7E-22 5.1E-26 150.6 8.4 104 274-387 30-137 (138)
27 d2eyqa3 c.37.1.19 (A:546-778) 99.8 8.3E-20 6E-24 150.9 19.2 173 46-231 39-221 (233)
28 d1gm5a3 c.37.1.19 (A:286-549) 99.8 3.9E-20 2.8E-24 155.9 15.2 170 48-231 70-249 (264)
29 d1wp9a2 c.37.1.19 (A:201-486) 99.8 2.9E-20 2.1E-24 162.5 12.2 123 266-389 144-278 (286)
30 d2p6ra4 c.37.1.19 (A:203-403) 99.8 6E-20 4.4E-24 150.4 10.9 121 267-389 30-189 (201)
31 d2fwra1 c.37.1.19 (A:257-456) 99.8 4.7E-20 3.4E-24 152.1 7.2 117 264-385 78-197 (200)
32 d1yksa1 c.37.1.14 (A:185-324) 99.8 2.5E-19 1.8E-23 139.2 7.9 136 74-224 4-140 (140)
33 d1gm5a4 c.37.1.19 (A:550-755) 99.7 6E-19 4.4E-23 143.0 6.8 132 266-397 14-159 (206)
34 d1a1va1 c.37.1.14 (A:190-325) 99.7 3.2E-18 2.3E-22 131.9 9.8 127 77-223 8-136 (136)
35 d2eyqa5 c.37.1.19 (A:779-989) 99.7 3.2E-17 2.3E-21 131.2 14.1 109 278-386 30-141 (211)
36 d1a1va2 c.37.1.14 (A:326-624) 99.7 1.8E-18 1.3E-22 144.9 4.0 107 278-385 35-154 (299)
37 d1gkub2 c.37.1.16 (B:251-498) 99.7 1.1E-19 7.8E-24 155.1 -5.4 120 264-394 11-135 (248)
38 d1z3ix2 c.37.1.19 (X:92-389) R 99.6 9.7E-15 7.1E-19 127.6 16.4 157 62-225 55-232 (298)
39 d1z3ix1 c.37.1.19 (X:390-735) 99.6 2E-14 1.4E-18 127.0 14.0 125 264-388 100-232 (346)
40 d1z63a1 c.37.1.19 (A:432-661) 99.5 7.3E-15 5.3E-19 123.4 10.1 150 62-226 12-165 (230)
41 d1z5za1 c.37.1.19 (A:663-906) 99.5 5.5E-14 4E-18 118.9 11.6 125 264-388 68-199 (244)
42 d1yksa2 c.37.1.14 (A:325-623) 99.5 9.9E-14 7.2E-18 118.8 10.1 101 279-384 36-155 (299)
43 d1tf5a4 c.37.1.19 (A:396-570) 99.4 1.8E-12 1.3E-16 99.8 14.2 124 261-387 14-148 (175)
44 d1tf5a3 c.37.1.19 (A:1-226,A:3 99.3 8.2E-11 6E-15 96.5 15.5 167 62-238 80-267 (273)
45 d1nkta3 c.37.1.19 (A:-15-225,A 99.2 1.1E-10 8.3E-15 96.1 14.6 166 62-237 97-281 (288)
46 d1nkta4 c.37.1.19 (A:397-615) 99.0 4.8E-09 3.5E-13 82.0 13.0 126 261-389 14-194 (219)
47 d1w36d1 c.37.1.19 (D:2-360) Ex 98.5 3.9E-07 2.8E-11 80.0 11.0 141 61-220 147-295 (359)
48 d1uaaa1 c.37.1.19 (A:2-307) DE 98.0 4.4E-06 3.2E-10 72.0 7.8 69 62-132 1-70 (306)
49 d1a5ta2 c.37.1.20 (A:1-207) de 98.0 9.4E-06 6.9E-10 65.4 7.8 139 63-223 3-148 (207)
50 d1pjra1 c.37.1.19 (A:1-318) DE 97.8 2.1E-05 1.5E-09 68.0 7.9 68 62-131 11-79 (318)
51 d2gnoa2 c.37.1.20 (A:11-208) g 97.5 0.00016 1.2E-08 57.3 8.2 113 67-224 2-120 (198)
52 d1ls1a2 c.37.1.10 (A:89-295) G 97.3 0.00022 1.6E-08 56.7 6.9 132 80-234 13-145 (207)
53 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 97.3 0.00021 1.5E-08 67.7 8.2 70 61-132 10-80 (623)
54 d2qy9a2 c.37.1.10 (A:285-495) 97.2 0.00076 5.5E-08 53.4 8.5 130 80-232 12-148 (211)
55 d1njfa_ c.37.1.20 (A:) delta p 97.1 0.0027 2E-07 51.7 11.6 38 182-220 115-152 (239)
56 d1gm5a3 c.37.1.19 (A:286-549) 96.9 0.0019 1.4E-07 53.1 9.1 90 278-369 131-225 (264)
57 d1sxjb2 c.37.1.20 (B:7-230) Re 96.9 0.00084 6.1E-08 54.3 6.9 43 181-224 100-142 (224)
58 d1l8qa2 c.37.1.20 (A:77-289) C 96.9 0.0028 2E-07 50.5 9.7 42 183-225 98-141 (213)
59 d1j8yf2 c.37.1.10 (F:87-297) G 96.7 0.0045 3.3E-07 48.8 9.7 130 80-232 15-147 (211)
60 d1sxje2 c.37.1.20 (E:4-255) Re 96.7 0.0013 9.3E-08 54.1 6.6 41 182-223 131-171 (252)
61 d1okkd2 c.37.1.10 (D:97-303) G 96.7 0.0032 2.3E-07 49.6 8.4 23 77-99 6-28 (207)
62 d2eyqa3 c.37.1.19 (A:546-778) 96.7 0.0078 5.7E-07 48.2 10.9 88 278-367 103-195 (233)
63 d1sxjc2 c.37.1.20 (C:12-238) R 96.6 0.0033 2.4E-07 50.7 8.6 41 179-220 96-136 (227)
64 d1t5la1 c.37.1.19 (A:2-414) Nu 96.6 0.0014 1E-07 57.7 6.5 66 62-133 11-81 (413)
65 d1ixza_ c.37.1.20 (A:) AAA dom 96.6 0.013 9.2E-07 47.7 11.9 54 38-94 4-59 (247)
66 d2b8ta1 c.37.1.24 (A:11-149) T 96.4 0.011 8.3E-07 43.1 9.6 87 80-194 5-91 (139)
67 d1vmaa2 c.37.1.10 (A:82-294) G 96.4 0.01 7.4E-07 46.8 9.9 59 80-142 14-72 (213)
68 d1iqpa2 c.37.1.20 (A:2-232) Re 96.4 0.0059 4.3E-07 49.3 8.6 43 40-95 21-63 (231)
69 d1sxjd2 c.37.1.20 (D:26-262) R 96.3 0.0098 7.1E-07 48.0 9.6 41 183-224 109-149 (237)
70 d1xx6a1 c.37.1.24 (A:2-142) Th 96.2 0.0056 4.1E-07 44.8 6.5 37 80-119 10-46 (141)
71 d1xbta1 c.37.1.24 (A:18-150) T 96.1 0.0066 4.8E-07 44.0 6.3 37 80-119 5-41 (133)
72 d1e32a2 c.37.1.20 (A:201-458) 95.8 0.015 1.1E-06 47.6 8.5 18 77-94 38-55 (258)
73 d2eyqa5 c.37.1.19 (A:779-989) 95.8 0.01 7.5E-07 46.3 6.7 101 108-220 31-138 (211)
74 d1lv7a_ c.37.1.20 (A:) AAA dom 95.6 0.075 5.5E-06 43.1 11.9 55 37-94 6-62 (256)
75 d1g6oa_ c.37.1.11 (A:) Hexamer 95.1 0.013 9.2E-07 49.8 5.6 52 65-120 153-205 (323)
76 d1c4oa1 c.37.1.19 (A:2-409) Nu 95.0 0.022 1.6E-06 49.9 6.8 67 61-133 7-78 (408)
77 d1p9ra_ c.37.1.11 (A:) Extrace 94.9 0.015 1.1E-06 51.0 5.8 38 65-103 144-183 (401)
78 d1um8a_ c.37.1.20 (A:) ClpX {H 94.6 0.016 1.1E-06 50.1 4.8 17 78-94 69-85 (364)
79 d2i3ba1 c.37.1.11 (A:1-189) Ca 94.3 0.015 1.1E-06 44.5 3.7 37 78-116 2-38 (189)
80 d1ofha_ c.37.1.20 (A:) HslU {H 94.2 0.018 1.3E-06 48.6 4.2 18 77-94 49-66 (309)
81 d1fnna2 c.37.1.20 (A:1-276) CD 93.9 0.038 2.8E-06 45.3 5.7 26 78-104 44-69 (276)
82 d1c4oa2 c.37.1.19 (A:410-583) 93.8 0.9 6.6E-05 33.9 12.9 105 108-222 31-140 (174)
83 d1jbka_ c.37.1.20 (A:) ClpB, A 93.5 0.1 7.5E-06 40.0 7.1 114 78-192 44-186 (195)
84 d1w36b1 c.37.1.19 (B:1-485) Ex 93.2 0.079 5.8E-06 47.4 7.2 55 77-131 16-79 (485)
85 d1t5la2 c.37.1.19 (A:415-595) 92.7 1.4 0.0001 33.0 13.4 104 108-221 31-139 (181)
86 d1g41a_ c.37.1.20 (A:) HslU {H 92.7 0.024 1.8E-06 50.2 2.6 18 77-94 49-66 (443)
87 d1fuka_ c.37.1.19 (A:) Initiat 92.6 0.34 2.4E-05 36.0 8.9 74 108-191 27-104 (162)
88 d1zp6a1 c.37.1.25 (A:6-181) Hy 92.3 0.034 2.5E-06 42.1 2.8 19 76-94 3-21 (176)
89 d1g5ta_ c.37.1.11 (A:) ATP:cor 92.2 0.41 3E-05 35.1 8.6 137 80-229 5-143 (157)
90 d1kaga_ c.37.1.2 (A:) Shikimat 92.2 0.045 3.3E-06 40.8 3.3 19 77-95 2-20 (169)
91 d1tf7a2 c.37.1.11 (A:256-497) 91.6 0.068 5E-06 42.9 4.0 50 77-130 26-75 (242)
92 d1e9ra_ c.37.1.11 (A:) Bacteri 91.3 0.085 6.2E-06 46.6 4.7 44 75-121 48-91 (433)
93 d1ly1a_ c.37.1.1 (A:) Polynucl 91.1 0.044 3.2E-06 40.3 2.2 15 80-94 5-19 (152)
94 d1in4a2 c.37.1.20 (A:17-254) H 91.0 0.069 5E-06 42.8 3.5 17 78-94 36-52 (238)
95 d1y63a_ c.37.1.1 (A:) Probable 90.9 0.054 3.9E-06 40.8 2.5 18 77-94 5-22 (174)
96 d1hv8a1 c.37.1.19 (A:3-210) Pu 90.6 0.31 2.2E-05 37.9 6.9 74 278-356 71-154 (208)
97 d1rkba_ c.37.1.1 (A:) Adenylat 90.5 0.071 5.2E-06 40.0 3.0 16 79-94 6-21 (173)
98 d2eyqa2 c.37.1.19 (A:349-465) 90.5 0.034 2.5E-06 39.1 0.9 78 265-355 21-98 (117)
99 d1ixsb2 c.37.1.20 (B:4-242) Ho 90.5 0.072 5.2E-06 42.7 3.1 17 78-94 36-52 (239)
100 d2bdta1 c.37.1.25 (A:1-176) Hy 90.4 0.055 4E-06 40.7 2.2 16 79-94 4-19 (176)
101 d1s2ma2 c.37.1.19 (A:252-422) 90.2 0.72 5.2E-05 34.4 8.5 75 108-192 32-110 (171)
102 d1lw7a2 c.37.1.1 (A:220-411) T 90.2 0.051 3.7E-06 41.5 1.8 18 77-94 7-24 (192)
103 d1szpa2 c.37.1.11 (A:145-395) 90.1 0.085 6.2E-06 42.3 3.2 42 76-117 33-77 (251)
104 d1oywa3 c.37.1.19 (A:207-406) 89.9 0.77 5.6E-05 35.3 8.6 73 108-190 30-106 (200)
105 d1n0wa_ c.37.1.11 (A:) DNA rep 89.5 0.11 8.2E-06 40.7 3.6 27 77-103 23-49 (242)
106 d2j0sa2 c.37.1.19 (A:244-411) 89.1 0.87 6.4E-05 33.8 8.2 97 80-191 11-111 (168)
107 d1gvnb_ c.37.1.21 (B:) Plasmid 89.0 0.1 7.3E-06 42.6 2.8 17 78-94 33-49 (273)
108 d1cr2a_ c.37.1.11 (A:) Gene 4 88.7 0.21 1.5E-05 40.8 4.7 42 74-117 32-73 (277)
109 d1qhxa_ c.37.1.3 (A:) Chloramp 88.5 0.1 7.6E-06 39.2 2.5 18 77-94 3-20 (178)
110 d1viaa_ c.37.1.2 (A:) Shikimat 88.2 0.14 1E-05 38.0 3.1 17 78-94 1-17 (161)
111 d2j0sa1 c.37.1.19 (A:22-243) P 88.2 0.31 2.2E-05 38.4 5.2 73 279-355 85-167 (222)
112 d2rb4a1 c.37.1.19 (A:307-474) 88.2 1 7.6E-05 33.3 8.1 75 107-191 31-109 (168)
113 d3adka_ c.37.1.1 (A:) Adenylat 88.1 0.28 2.1E-05 37.5 4.9 22 74-95 5-26 (194)
114 d1d2na_ c.37.1.20 (A:) Hexamer 88.1 0.12 8.5E-06 41.7 2.6 17 78-94 41-57 (246)
115 d1sxja2 c.37.1.20 (A:295-547) 88.1 0.13 9.7E-06 41.4 3.0 53 40-94 11-69 (253)
116 d1ak2a1 c.37.1.1 (A:14-146,A:1 88.0 0.15 1.1E-05 39.0 3.2 19 77-95 3-21 (190)
117 d1m8pa3 c.37.1.15 (A:391-573) 88.0 0.14 1E-05 38.6 2.9 19 76-94 5-23 (183)
118 d1v5wa_ c.37.1.11 (A:) Meiotic 87.9 0.17 1.2E-05 40.6 3.6 51 76-126 36-89 (258)
119 d1zina1 c.37.1.1 (A:1-125,A:16 87.9 0.14 1E-05 38.8 2.9 16 80-95 3-18 (182)
120 d1knqa_ c.37.1.17 (A:) Glucona 87.9 0.11 8E-06 38.9 2.2 16 80-95 9-24 (171)
121 d1s3ga1 c.37.1.1 (A:1-125,A:16 87.5 0.15 1.1E-05 38.7 2.9 16 80-95 3-18 (182)
122 d1tf7a1 c.37.1.11 (A:14-255) C 87.4 0.21 1.5E-05 39.5 3.8 39 76-116 25-63 (242)
123 d1khta_ c.37.1.1 (A:) Adenylat 87.3 0.25 1.8E-05 37.3 4.1 17 78-94 2-18 (190)
124 d2cdna1 c.37.1.1 (A:1-181) Ade 87.2 0.16 1.2E-05 38.5 2.8 18 79-96 2-19 (181)
125 d1e6ca_ c.37.1.2 (A:) Shikimat 86.8 0.21 1.5E-05 37.4 3.2 18 78-95 3-20 (170)
126 d1zaka1 c.37.1.1 (A:3-127,A:15 86.5 0.16 1.2E-05 38.8 2.5 17 79-95 5-21 (189)
127 d1e4va1 c.37.1.1 (A:1-121,A:15 86.2 0.17 1.2E-05 38.3 2.5 16 79-94 2-17 (179)
128 d1pzna2 c.37.1.11 (A:96-349) D 86.1 0.17 1.3E-05 40.6 2.6 26 77-102 36-61 (254)
129 d1ukza_ c.37.1.1 (A:) Uridylat 86.0 0.2 1.5E-05 38.5 2.9 16 80-95 11-26 (196)
130 d1qf9a_ c.37.1.1 (A:) UMP/CMP 86.0 0.18 1.3E-05 38.7 2.5 16 79-94 8-23 (194)
131 d1g8pa_ c.37.1.20 (A:) ATPase 86.0 0.12 9.1E-06 43.7 1.7 19 76-94 27-45 (333)
132 d2i1qa2 c.37.1.11 (A:65-322) D 85.9 0.2 1.4E-05 40.0 2.9 28 76-103 33-60 (258)
133 d1yj5a2 c.37.1.1 (A:351-522) 5 85.9 0.17 1.2E-05 38.2 2.2 16 79-94 16-31 (172)
134 d2ak3a1 c.37.1.1 (A:0-124,A:16 85.8 0.21 1.5E-05 38.2 2.8 18 79-96 8-25 (189)
135 d1x6va3 c.37.1.4 (A:34-228) Ad 85.7 0.1 7.5E-06 40.0 0.9 18 78-95 20-37 (195)
136 d1teva_ c.37.1.1 (A:) UMP/CMP 85.7 0.21 1.6E-05 38.2 2.9 16 80-95 4-19 (194)
137 d1qvra2 c.37.1.20 (A:149-535) 85.5 2 0.00015 36.6 9.4 114 78-193 44-186 (387)
138 d1yksa2 c.37.1.14 (A:325-623) 85.5 0.65 4.7E-05 38.2 5.9 53 109-165 37-89 (299)
139 d1akya1 c.37.1.1 (A:3-130,A:16 85.4 0.23 1.7E-05 37.6 2.9 17 79-95 4-20 (180)
140 d1t5ia_ c.37.1.19 (A:) Spliceo 85.1 1.7 0.00012 32.1 7.7 74 109-192 28-105 (168)
141 d1r7ra3 c.37.1.20 (A:471-735) 85.1 0.38 2.8E-05 39.0 4.2 18 77-94 41-58 (265)
142 d1ny5a2 c.37.1.20 (A:138-384) 85.0 1 7.3E-05 35.9 6.8 20 75-94 21-40 (247)
143 d1u94a1 c.37.1.11 (A:6-268) Re 85.0 0.4 2.9E-05 38.8 4.3 43 77-122 54-96 (263)
144 d1r6bx2 c.37.1.20 (X:169-436) 85.0 2.7 0.0002 33.6 9.4 115 78-193 40-183 (268)
145 d1hv8a2 c.37.1.19 (A:211-365) 84.6 2 0.00014 31.2 7.9 74 108-191 28-105 (155)
146 d1svma_ c.37.1.20 (A:) Papillo 84.5 0.32 2.4E-05 41.4 3.6 19 77-95 154-172 (362)
147 d1ye8a1 c.37.1.11 (A:1-178) Hy 84.4 0.27 1.9E-05 36.9 2.8 23 79-102 2-24 (178)
148 d1w5sa2 c.37.1.20 (A:7-293) CD 83.4 0.2 1.4E-05 40.9 1.8 16 80-95 49-64 (287)
149 d1bg2a_ c.37.1.9 (A:) Kinesin 83.0 0.34 2.5E-05 40.6 3.2 24 71-94 68-93 (323)
150 d1np6a_ c.37.1.10 (A:) Molybdo 82.7 0.57 4.2E-05 34.5 4.1 15 80-94 5-19 (170)
151 d1znwa1 c.37.1.1 (A:20-201) Gu 82.5 0.31 2.2E-05 36.9 2.5 18 77-94 2-19 (182)
152 d1t6na_ c.37.1.19 (A:) Spliceo 82.4 1.2 8.8E-05 34.3 6.1 104 280-386 70-186 (207)
153 d2pmka1 c.37.1.12 (A:467-707) 82.4 0.45 3.3E-05 37.8 3.5 20 74-93 26-45 (241)
154 d2iyva1 c.37.1.2 (A:2-166) Shi 82.1 0.4 2.9E-05 35.5 3.0 17 79-95 3-19 (165)
155 d1rz3a_ c.37.1.6 (A:) Hypothet 81.9 0.36 2.6E-05 36.7 2.7 15 80-94 25-39 (198)
156 d1gkya_ c.37.1.1 (A:) Guanylat 81.4 0.35 2.5E-05 36.8 2.4 17 78-94 2-18 (186)
157 d1nlfa_ c.37.1.11 (A:) Hexamer 81.3 0.84 6.1E-05 36.8 5.0 62 71-133 23-91 (274)
158 d1jj7a_ c.37.1.12 (A:) Peptide 80.8 0.56 4.1E-05 37.5 3.6 21 74-94 37-57 (251)
159 d1goja_ c.37.1.9 (A:) Kinesin 80.7 0.47 3.4E-05 40.3 3.2 25 70-94 71-97 (354)
160 d1veca_ c.37.1.19 (A:) DEAD bo 80.5 1.8 0.00013 33.1 6.5 74 278-355 70-154 (206)
161 d1yrba1 c.37.1.10 (A:1-244) AT 79.9 0.75 5.5E-05 36.3 4.1 21 80-101 3-23 (244)
162 d1bifa1 c.37.1.7 (A:37-249) 6- 79.6 0.74 5.4E-05 35.4 3.9 16 80-95 5-20 (213)
163 d1byia_ c.37.1.10 (A:) Dethiob 79.5 0.64 4.7E-05 36.0 3.5 34 78-114 2-36 (224)
164 d1nksa_ c.37.1.1 (A:) Adenylat 79.3 0.36 2.6E-05 36.5 1.8 15 80-94 4-18 (194)
165 d1v8ka_ c.37.1.9 (A:) Kinesin 79.3 0.49 3.5E-05 40.3 2.9 24 71-94 106-131 (362)
166 d1ckea_ c.37.1.1 (A:) CMP kina 79.1 0.52 3.8E-05 36.7 2.9 16 80-95 6-21 (225)
167 d1gkub1 c.37.1.16 (B:1-250) He 78.9 3.4 0.00025 32.2 7.9 77 277-355 84-170 (237)
168 d1mv5a_ c.37.1.12 (A:) Multidr 78.7 0.71 5.2E-05 36.7 3.5 20 74-93 25-44 (242)
169 d1lvga_ c.37.1.1 (A:) Guanylat 78.7 0.48 3.5E-05 36.1 2.4 15 80-94 3-17 (190)
170 d1l2ta_ c.37.1.12 (A:) MJ0796 78.5 0.77 5.6E-05 36.1 3.6 28 74-103 28-55 (230)
171 d1knxa2 c.91.1.2 (A:133-309) H 78.3 0.54 4E-05 35.2 2.5 21 76-96 14-34 (177)
172 d1sdma_ c.37.1.9 (A:) Kinesin 78.2 0.55 4E-05 40.0 2.8 25 70-94 66-92 (364)
173 d2ncda_ c.37.1.9 (A:) Kinesin 77.7 0.57 4.2E-05 40.0 2.8 25 70-94 116-142 (368)
174 d2zfia1 c.37.1.9 (A:4-352) Kin 77.7 0.65 4.8E-05 39.3 3.2 24 71-94 79-104 (349)
175 d1x88a1 c.37.1.9 (A:18-362) Ki 77.6 0.55 4E-05 39.7 2.7 25 70-94 72-98 (345)
176 d1s96a_ c.37.1.1 (A:) Guanylat 77.3 0.76 5.6E-05 35.4 3.2 18 77-94 2-19 (205)
177 d1odfa_ c.37.1.6 (A:) Hypothet 77.3 0.91 6.7E-05 36.9 3.8 15 80-94 30-44 (286)
178 d1jr6a_ c.37.1.14 (A:) HCV hel 77.2 1.8 0.00013 30.8 5.0 66 108-187 35-100 (138)
179 d1kkma_ c.91.1.2 (A:) HPr kina 77.1 0.68 4.9E-05 34.6 2.7 21 76-96 13-33 (176)
180 d1w44a_ c.37.1.11 (A:) NTPase 76.7 0.51 3.7E-05 39.2 2.1 16 79-94 125-140 (321)
181 d1mo6a1 c.37.1.11 (A:1-269) Re 76.5 1.2 8.9E-05 35.8 4.4 45 76-123 59-103 (269)
182 d1f9va_ c.37.1.9 (A:) Kinesin 76.4 0.81 5.9E-05 38.5 3.4 25 70-94 74-100 (342)
183 d1wrba1 c.37.1.19 (A:164-401) 76.3 15 0.0011 28.4 11.0 114 279-396 98-226 (238)
184 d1kgda_ c.37.1.1 (A:) Guanylat 76.0 0.66 4.8E-05 34.9 2.4 17 78-94 4-20 (178)
185 d1q3ta_ c.37.1.1 (A:) CMP kina 75.8 0.76 5.5E-05 35.7 2.9 16 80-95 6-21 (223)
186 d1uj2a_ c.37.1.6 (A:) Uridine- 75.8 0.6 4.3E-05 36.2 2.2 15 80-94 5-19 (213)
187 d4tmka_ c.37.1.1 (A:) Thymidyl 75.6 2 0.00014 32.9 5.4 18 77-94 2-19 (210)
188 d1sq5a_ c.37.1.6 (A:) Pantothe 75.6 1.1 8.3E-05 36.8 4.0 15 80-94 83-97 (308)
189 d3b60a1 c.37.1.12 (A:329-581) 75.5 0.86 6.3E-05 36.4 3.2 21 74-94 38-58 (253)
190 d2hyda1 c.37.1.12 (A:324-578) 75.5 0.65 4.7E-05 37.2 2.4 20 74-93 41-60 (255)
191 d1r6bx3 c.37.1.20 (X:437-751) 74.9 0.79 5.8E-05 38.1 2.9 17 79-95 54-70 (315)
192 d1sgwa_ c.37.1.12 (A:) Putativ 74.7 0.71 5.2E-05 35.4 2.4 20 75-94 25-44 (200)
193 d1qdea_ c.37.1.19 (A:) Initiat 74.6 1.1 8.1E-05 34.7 3.6 112 278-398 77-203 (212)
194 d1xp8a1 c.37.1.11 (A:15-282) R 74.1 1.3 9.3E-05 35.7 3.9 43 77-122 57-99 (268)
195 d1ko7a2 c.91.1.2 (A:130-298) H 74.0 0.8 5.8E-05 34.0 2.4 21 76-96 14-34 (169)
196 d2vp4a1 c.37.1.1 (A:12-208) De 73.1 1.2 8.5E-05 33.8 3.3 15 80-94 12-26 (197)
197 d1yt8a4 c.46.1.2 (A:243-372) T 72.9 2.2 0.00016 29.8 4.5 38 277-314 78-115 (130)
198 d2awna2 c.37.1.12 (A:4-235) Ma 72.8 1.5 0.00011 34.4 3.9 19 75-93 24-42 (232)
199 d1xjca_ c.37.1.10 (A:) Molybdo 72.5 1.8 0.00013 31.7 4.1 23 80-103 4-26 (165)
200 d1xpua3 c.37.1.11 (A:129-417) 72.3 2 0.00014 34.8 4.6 26 72-97 38-63 (289)
201 d1nija1 c.37.1.10 (A:2-223) Hy 71.6 1.2 8.9E-05 34.7 3.1 32 80-116 6-37 (222)
202 d1s2ma1 c.37.1.19 (A:46-251) P 71.3 6.7 0.00049 29.6 7.6 74 278-355 68-151 (206)
203 d1qvra3 c.37.1.20 (A:536-850) 71.3 1 7.6E-05 37.3 2.7 17 79-95 55-71 (315)
204 d1g2912 c.37.1.12 (1:1-240) Ma 69.7 1.1 7.7E-05 35.5 2.3 19 75-93 27-45 (240)
205 d1v43a3 c.37.1.12 (A:7-245) Hy 69.6 1.9 0.00014 33.9 3.9 21 74-94 29-49 (239)
206 d1r0wa_ c.37.1.12 (A:) Cystic 69.3 1.2 8.9E-05 36.2 2.7 19 75-93 60-78 (281)
207 d1ihua2 c.37.1.10 (A:308-586) 69.0 2.9 0.00021 33.5 5.1 33 80-115 23-55 (279)
208 d3dhwc1 c.37.1.12 (C:1-240) Me 69.0 1 7.3E-05 35.6 2.0 20 74-93 28-47 (240)
209 d3d31a2 c.37.1.12 (A:1-229) Su 68.3 1.7 0.00012 34.0 3.2 21 74-94 23-43 (229)
210 d1oxxk2 c.37.1.12 (K:1-242) Gl 68.3 1.3 9.7E-05 34.9 2.6 20 75-94 29-48 (242)
211 d1gm5a4 c.37.1.19 (A:550-755) 68.2 0.67 4.9E-05 35.7 0.8 82 108-195 29-121 (206)
212 d2fnaa2 c.37.1.20 (A:1-283) Ar 67.6 1.6 0.00011 34.9 3.1 18 77-94 29-46 (283)
213 d1p5zb_ c.37.1.1 (B:) Deoxycyt 67.4 1.7 0.00013 33.9 3.3 18 77-94 2-19 (241)
214 d1ry6a_ c.37.1.9 (A:) Kinesin 67.2 1.4 0.0001 36.7 2.8 19 76-94 82-102 (330)
215 d2b2na1 c.37.1.19 (A:26-333) T 65.6 19 0.0014 29.1 9.5 88 277-364 12-117 (308)
216 d1lkxa_ c.37.1.9 (A:) Myosin S 65.5 1.9 0.00014 40.0 3.4 57 39-95 40-104 (684)
217 d2jdid3 c.37.1.11 (D:82-357) C 65.5 8.2 0.0006 30.8 7.0 26 74-99 65-90 (276)
218 d1ji0a_ c.37.1.12 (A:) Branche 64.9 1.5 0.00011 34.6 2.3 20 75-94 30-49 (240)
219 d1ihua1 c.37.1.10 (A:1-296) Ar 64.1 2.9 0.00021 33.8 4.2 35 78-115 9-43 (296)
220 d1uf9a_ c.37.1.1 (A:) Dephosph 64.0 1.3 9.7E-05 33.3 1.8 14 81-94 7-20 (191)
221 d1m7ga_ c.37.1.4 (A:) Adenosin 64.0 1.6 0.00011 33.7 2.2 16 79-94 26-41 (208)
222 d1htwa_ c.37.1.18 (A:) Hypothe 63.6 2.5 0.00018 30.7 3.1 37 80-122 36-72 (158)
223 d2gc6a1 c.59.1.2 (A:297-425) F 63.2 7 0.00051 26.8 5.6 111 185-299 13-127 (129)
224 d1br2a2 c.37.1.9 (A:80-789) My 63.1 2.2 0.00016 39.7 3.4 56 39-94 45-108 (710)
225 d1kk8a2 c.37.1.9 (A:1-28,A:77- 62.8 3.4 0.00025 38.9 4.8 57 39-95 75-139 (789)
226 d2a5yb3 c.37.1.20 (B:109-385) 62.6 33 0.0024 27.0 10.8 16 80-95 47-62 (277)
227 d1nn5a_ c.37.1.1 (A:) Thymidyl 62.5 3.4 0.00024 31.6 4.0 28 76-104 2-29 (209)
228 d1gmxa_ c.46.1.3 (A:) Sulfurtr 62.4 4.3 0.00031 27.1 4.1 45 270-314 48-94 (108)
229 d1d0xa2 c.37.1.9 (A:2-33,A:80- 62.2 3.2 0.00023 38.5 4.4 57 39-95 79-143 (712)
230 d1vhta_ c.37.1.1 (A:) Dephosph 62.1 1.7 0.00013 33.3 2.2 15 80-94 6-20 (208)
231 d2qm8a1 c.37.1.10 (A:5-327) Me 62.0 3.3 0.00024 34.2 4.1 16 80-95 54-69 (323)
232 d1l7vc_ c.37.1.12 (C:) ABC tra 61.6 1.4 0.0001 34.6 1.5 21 74-94 22-42 (231)
233 d2fh5b1 c.37.1.8 (B:63-269) Si 61.0 1.9 0.00014 32.8 2.3 16 78-93 1-16 (207)
234 d1b0ua_ c.37.1.12 (A:) ATP-bin 60.9 2 0.00014 34.3 2.3 21 74-94 25-45 (258)
235 d1tq1a_ c.46.1.3 (A:) Thiosulf 60.5 2.5 0.00018 28.9 2.6 37 278-314 71-108 (119)
236 d1jjva_ c.37.1.1 (A:) Dephosph 60.1 2 0.00015 32.8 2.2 15 80-94 5-19 (205)
237 d1vi2a1 c.2.1.7 (A:107-288) Pu 59.6 16 0.0012 26.8 7.5 81 76-166 17-99 (182)
238 d2g9na1 c.37.1.19 (A:21-238) I 59.3 2.2 0.00016 33.0 2.3 75 278-355 79-163 (218)
239 d1urha2 c.46.1.2 (A:149-268) 3 58.7 11 0.00083 25.2 6.0 46 269-314 69-118 (120)
240 g1xew.1 c.37.1.12 (X:,Y:) Smc 58.1 1.6 0.00012 36.1 1.4 15 80-94 29-43 (329)
241 d1tmka_ c.37.1.1 (A:) Thymidyl 57.8 2.3 0.00017 32.8 2.2 19 76-94 2-20 (214)
242 d1qxna_ c.46.1.3 (A:) Polysulf 57.7 3.9 0.00029 28.8 3.3 36 278-313 81-117 (137)
243 d2p67a1 c.37.1.10 (A:1-327) LA 57.3 5.7 0.00042 32.8 4.8 40 80-120 57-96 (327)
244 d1w7ja2 c.37.1.9 (A:63-792) My 56.6 4.5 0.00033 37.7 4.4 58 39-96 48-113 (730)
245 d1w1wa_ c.37.1.12 (A:) Smc hea 56.1 2.2 0.00016 36.7 2.0 16 79-94 27-42 (427)
246 d1qhla_ c.37.1.12 (A:) Cell di 55.4 1.1 7.8E-05 34.1 -0.2 15 80-94 27-41 (222)
247 d1g6ha_ c.37.1.12 (A:) MJ1267 55.1 2.8 0.0002 33.3 2.3 20 75-94 28-47 (254)
248 d2a9pa1 c.23.1.1 (A:2-118) DNA 54.7 9.8 0.00071 25.6 5.0 50 280-335 1-50 (117)
249 d2onka1 c.37.1.12 (A:1-240) Mo 54.5 2.8 0.00021 32.9 2.2 15 79-93 26-40 (240)
250 d1krwa_ c.23.1.1 (A:) NTRC rec 54.4 20 0.0015 24.1 6.7 50 280-335 4-53 (123)
251 d1wp9a2 c.37.1.19 (A:201-486) 54.3 46 0.0033 26.1 11.9 95 88-193 142-248 (286)
252 d1oywa2 c.37.1.19 (A:1-206) Re 54.2 31 0.0023 25.4 8.6 60 278-337 64-123 (206)
253 g1f2t.1 c.37.1.12 (A:,B:) Rad5 53.4 2.6 0.00019 33.8 1.9 15 80-94 26-40 (292)
254 d1vpla_ c.37.1.12 (A:) Putativ 53.2 3.2 0.00023 32.6 2.3 20 75-94 26-45 (238)
255 d1wp9a1 c.37.1.19 (A:1-200) pu 53.0 14 0.001 27.3 6.3 73 278-355 51-133 (200)
256 d1u0la2 c.37.1.8 (A:69-293) Pr 52.9 4.5 0.00032 31.3 3.1 29 65-93 83-111 (225)
257 d1z5za1 c.37.1.19 (A:663-906) 52.7 42 0.0031 25.6 9.3 98 85-193 65-167 (244)
258 d2b2na1 c.37.1.19 (A:26-333) T 51.9 12 0.00087 30.4 5.9 60 109-171 15-90 (308)
259 d2ocpa1 c.37.1.1 (A:37-277) De 50.5 3 0.00022 32.5 1.8 16 79-94 4-19 (241)
260 d1gsia_ c.37.1.1 (A:) Thymidyl 50.4 7.3 0.00053 29.3 4.1 15 80-94 3-17 (208)
261 d1r8sa_ c.37.1.8 (A:) ADP-ribo 49.9 3.8 0.00028 29.2 2.2 15 80-94 3-17 (160)
262 d1xhfa1 c.23.1.1 (A:2-122) Aer 49.8 17 0.0013 24.4 5.7 50 280-335 3-52 (121)
263 d2bmfa2 c.37.1.14 (A:178-482) 49.8 10 0.00075 30.3 5.3 55 108-166 178-232 (305)
264 d1mvoa_ c.23.1.1 (A:) PhoP rec 49.7 14 0.001 24.9 5.2 31 281-311 4-34 (121)
265 d1a7ja_ c.37.1.6 (A:) Phosphor 49.0 4.4 0.00032 32.7 2.6 15 80-94 7-21 (288)
266 d1tuea_ c.37.1.20 (A:) Replica 48.9 6 0.00044 29.9 3.2 17 78-94 54-70 (205)
267 d1ksha_ c.37.1.8 (A:) ADP-ribo 48.7 4.1 0.0003 29.4 2.2 15 79-93 4-18 (165)
268 g1ii8.1 c.37.1.12 (A:,B:) Rad5 48.2 3.8 0.00027 33.7 2.2 16 79-94 25-40 (369)
269 d1yt8a2 c.46.1.2 (A:6-106) Thi 48.1 4.9 0.00036 26.3 2.4 37 277-313 56-93 (101)
270 d1fx0a3 c.37.1.11 (A:97-372) C 47.8 6.2 0.00045 31.6 3.3 26 73-98 63-88 (276)
271 d1ys7a2 c.23.1.1 (A:7-127) Tra 47.8 21 0.0015 24.0 5.8 104 261-372 8-118 (121)
272 d1a1va2 c.37.1.14 (A:326-624) 47.4 13 0.00097 29.8 5.2 37 108-148 36-72 (299)
273 d1zesa1 c.23.1.1 (A:3-123) Pho 46.6 18 0.0013 24.3 5.4 49 281-335 2-50 (121)
274 d1u0ja_ c.37.1.20 (A:) Rep 40 46.3 14 0.001 29.2 5.3 43 50-94 74-121 (267)
275 d1e69a_ c.37.1.12 (A:) Smc hea 46.0 3.7 0.00027 33.3 1.7 14 81-94 28-41 (308)
276 d1peya_ c.23.1.1 (A:) Sporulat 45.4 18 0.0013 24.2 5.2 31 280-310 2-32 (119)
277 d1cp2a_ c.37.1.10 (A:) Nitroge 45.2 7.7 0.00056 30.6 3.6 32 80-114 4-35 (269)
278 d1moza_ c.37.1.8 (A:) ADP-ribo 45.0 6.1 0.00044 29.0 2.7 14 80-93 20-33 (182)
279 d2qtvb1 c.37.1.8 (B:24-189) SA 44.9 5.2 0.00038 28.4 2.3 16 79-94 2-17 (166)
280 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 44.6 3.8 0.00027 30.1 1.4 15 79-93 15-29 (186)
281 d1deka_ c.37.1.1 (A:) Deoxynuc 44.3 4.9 0.00036 31.2 2.2 15 80-94 4-18 (241)
282 d3raba_ c.37.1.8 (A:) Rab3a {R 44.0 5.3 0.00039 29.0 2.2 15 80-94 8-22 (169)
283 d1yt8a1 c.46.1.2 (A:107-242) T 43.3 12 0.00088 26.0 4.0 36 278-313 79-116 (136)
284 d1mkya1 c.37.1.8 (A:2-172) Pro 43.0 5.6 0.00041 28.9 2.2 14 80-93 3-16 (171)
285 d1nrjb_ c.37.1.8 (B:) Signal r 42.8 5.5 0.0004 29.9 2.2 15 79-93 5-19 (209)
286 d2mysa2 c.37.1.9 (A:4-33,A:80- 42.5 5.5 0.0004 37.4 2.5 57 39-95 77-141 (794)
287 d1em8a_ c.128.1.1 (A:) DNA pol 42.4 34 0.0025 23.9 6.5 76 269-356 24-101 (147)
288 d1ozbi_ g.74.1.1 (I:) Preprote 42.2 3.3 0.00024 19.3 0.4 8 84-91 7-14 (26)
289 d2f7sa1 c.37.1.8 (A:5-190) Rab 41.9 5.9 0.00043 29.2 2.2 14 80-93 8-21 (186)
290 d1g3qa_ c.37.1.10 (A:) Cell di 41.4 11 0.00079 28.8 3.9 31 81-114 7-37 (237)
291 d1hyqa_ c.37.1.10 (A:) Cell di 41.2 12 0.0009 28.4 4.2 32 80-114 5-36 (232)
292 d2a5ja1 c.37.1.8 (A:9-181) Rab 41.1 6.3 0.00046 28.7 2.2 14 80-93 6-19 (173)
293 d1kgsa2 c.23.1.1 (A:2-123) Pho 40.9 26 0.0019 23.4 5.5 26 300-325 42-67 (122)
294 d2afhe1 c.37.1.10 (E:1-289) Ni 40.4 9.5 0.00069 30.5 3.5 32 80-114 5-36 (289)
295 d1c9ka_ c.37.1.11 (A:) Adenosy 40.1 11 0.00078 27.9 3.3 45 80-131 2-46 (180)
296 d1svia_ c.37.1.8 (A:) Probable 39.9 5.5 0.0004 29.7 1.7 15 79-93 25-39 (195)
297 d1zd9a1 c.37.1.8 (A:18-181) AD 39.6 6.8 0.00049 28.2 2.2 15 79-93 4-18 (164)
298 d1z2aa1 c.37.1.8 (A:8-171) Rab 39.6 6.9 0.0005 28.1 2.2 15 80-94 5-19 (164)
299 d1upta_ c.37.1.8 (A:) ADP-ribo 39.5 6.8 0.0005 27.9 2.2 15 79-93 7-21 (169)
300 d1h65a_ c.37.1.8 (A:) Chloropl 39.4 5.7 0.00041 31.4 1.8 16 79-94 34-49 (257)
301 d1npya1 c.2.1.7 (A:103-269) Sh 38.7 56 0.004 23.2 7.4 44 76-126 16-59 (167)
302 d1mb3a_ c.23.1.1 (A:) Cell div 38.6 25 0.0018 23.6 5.1 15 357-371 105-119 (123)
303 d1zj6a1 c.37.1.8 (A:2-178) ADP 38.4 6.2 0.00045 28.6 1.8 15 79-93 17-31 (177)
304 d2atva1 c.37.1.8 (A:5-172) Ras 38.3 7.3 0.00053 28.1 2.2 15 80-94 5-19 (168)
305 d1dbwa_ c.23.1.1 (A:) Transcri 38.2 51 0.0037 21.9 6.7 49 281-335 5-53 (123)
306 d1wmsa_ c.37.1.8 (A:) Rab9a {H 38.0 8.5 0.00062 27.9 2.5 15 80-94 9-23 (174)
307 d1z06a1 c.37.1.8 (A:32-196) Ra 37.9 7.5 0.00055 27.9 2.2 15 80-94 5-19 (165)
308 d2f9la1 c.37.1.8 (A:8-182) Rab 37.9 7.6 0.00055 28.3 2.2 15 80-94 7-21 (175)
309 d2cxxa1 c.37.1.8 (A:2-185) GTP 37.8 6.2 0.00045 28.9 1.7 16 79-94 2-17 (184)
310 d1wf3a1 c.37.1.8 (A:3-180) GTP 37.0 7.9 0.00058 28.2 2.2 15 79-93 7-21 (178)
311 d1i2ma_ c.37.1.8 (A:) Ran {Hum 37.0 6.8 0.0005 28.4 1.8 14 80-93 6-19 (170)
312 d2p6ra4 c.37.1.19 (A:203-403) 36.8 41 0.003 24.9 6.5 75 109-189 41-145 (201)
313 d2bmea1 c.37.1.8 (A:6-179) Rab 36.7 7 0.00051 28.4 1.8 15 80-94 8-22 (174)
314 d1zgza1 c.23.1.1 (A:2-121) Tor 36.7 38 0.0027 22.4 5.8 50 280-335 2-51 (120)
315 d1wb9a2 c.37.1.12 (A:567-800) 36.6 11 0.00081 29.1 3.1 16 78-93 42-57 (234)
316 d2pl1a1 c.23.1.1 (A:1-119) Pho 36.5 35 0.0025 22.6 5.5 27 282-308 3-29 (119)
317 d2pjua1 c.92.3.1 (A:11-196) Pr 36.3 73 0.0053 23.2 9.7 115 281-404 2-122 (186)
318 d1wmaa1 c.2.1.2 (A:2-276) Carb 36.0 56 0.0041 25.4 7.6 59 279-337 28-89 (275)
319 d1kaoa_ c.37.1.8 (A:) Rap2a {H 35.9 11 0.00079 27.0 2.9 16 79-94 5-20 (167)
320 d2gj8a1 c.37.1.8 (A:216-376) P 35.9 7.3 0.00053 27.7 1.8 15 79-93 3-17 (161)
321 d1e0sa_ c.37.1.8 (A:) ADP-ribo 35.8 8.6 0.00062 27.9 2.2 15 79-93 14-28 (173)
322 d2erxa1 c.37.1.8 (A:6-176) di- 35.3 8.6 0.00063 27.7 2.2 14 80-93 5-18 (171)
323 d1ky3a_ c.37.1.8 (A:) Rab-rela 35.2 8.7 0.00063 27.8 2.2 15 80-94 5-19 (175)
324 d1e2ka_ c.37.1.1 (A:) Thymidin 34.7 9.5 0.00069 31.3 2.5 15 80-94 7-21 (329)
325 d1r2qa_ c.37.1.8 (A:) Rab5a {H 34.5 9.2 0.00067 27.6 2.2 15 80-94 9-23 (170)
326 d1z0fa1 c.37.1.8 (A:8-173) Rab 34.5 9.2 0.00067 27.4 2.2 14 80-93 7-20 (166)
327 d1r0ka2 c.2.1.3 (A:3-126,A:265 34.4 69 0.005 22.4 8.4 14 78-91 3-17 (150)
328 d1t9ha2 c.37.1.8 (A:68-298) Pr 34.3 5.4 0.00039 31.0 0.8 24 70-93 90-113 (231)
329 d1fzqa_ c.37.1.8 (A:) ADP-ribo 34.2 8 0.00059 28.0 1.8 15 79-93 18-32 (176)
330 d2g6ba1 c.37.1.8 (A:58-227) Ra 34.2 9.4 0.00068 27.5 2.2 14 80-93 9-22 (170)
331 d1udxa2 c.37.1.8 (A:157-336) O 34.0 7.7 0.00056 28.3 1.7 16 79-94 3-18 (180)
332 d1w25a1 c.23.1.1 (A:2-140) Res 33.9 31 0.0023 23.7 5.1 30 281-310 3-32 (139)
333 d2gjsa1 c.37.1.8 (A:91-258) Ra 33.7 9.6 0.0007 27.5 2.2 14 80-93 4-17 (168)
334 d1o5za1 c.59.1.2 (A:294-430) F 33.7 43 0.0031 22.7 5.8 53 184-238 11-63 (137)
335 d2jdia3 c.37.1.11 (A:95-379) C 33.6 12 0.00085 30.0 2.8 29 72-100 63-91 (285)
336 d1z08a1 c.37.1.8 (A:17-183) Ra 33.4 9.8 0.00071 27.3 2.2 15 80-94 6-20 (167)
337 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 33.1 11 0.00081 27.3 2.5 16 79-94 4-19 (177)
338 d1azta2 c.37.1.8 (A:35-65,A:20 32.9 9.8 0.00071 29.0 2.2 15 79-93 8-22 (221)
339 d1x1ra1 c.37.1.8 (A:10-178) Ra 32.5 10 0.00075 27.3 2.2 15 80-94 7-21 (169)
340 d2fu5c1 c.37.1.8 (C:3-175) Rab 32.5 7.9 0.00058 28.1 1.5 14 80-93 9-22 (173)
341 d1lnza2 c.37.1.8 (A:158-342) O 32.3 11 0.00078 27.6 2.3 15 79-93 3-17 (185)
342 d2erya1 c.37.1.8 (A:10-180) r- 32.2 9.1 0.00066 27.6 1.8 16 79-94 7-22 (171)
343 d1u8za_ c.37.1.8 (A:) Ras-rela 32.2 11 0.00077 27.2 2.2 15 79-93 6-20 (168)
344 d2fn4a1 c.37.1.8 (A:24-196) r- 32.1 9.1 0.00066 27.8 1.8 15 79-93 8-22 (173)
345 d1gkub2 c.37.1.16 (B:251-498) 32.1 36 0.0026 26.1 5.7 74 109-190 26-100 (248)
346 d1g16a_ c.37.1.8 (A:) Rab-rela 31.3 9.7 0.00071 27.3 1.8 14 80-93 5-18 (166)
347 d1c1ya_ c.37.1.8 (A:) Rap1A {H 31.2 11 0.00082 27.0 2.2 15 80-94 6-20 (167)
348 d1rhsa2 c.46.1.2 (A:150-293) R 30.9 26 0.0019 24.4 4.2 47 268-314 77-127 (144)
349 d2bcgy1 c.37.1.8 (Y:3-196) GTP 30.8 9.8 0.00072 28.2 1.8 14 80-93 9-22 (194)
350 d1yzqa1 c.37.1.8 (A:14-177) Ra 30.6 10 0.00074 27.1 1.8 15 80-94 3-17 (164)
351 d1luaa1 c.2.1.7 (A:98-288) Met 30.6 89 0.0065 22.5 7.6 79 75-166 21-100 (191)
352 d2g3ya1 c.37.1.8 (A:73-244) GT 30.6 12 0.00084 27.1 2.2 14 80-93 6-19 (172)
353 d2ew1a1 c.37.1.8 (A:4-174) Rab 30.5 10 0.00074 27.4 1.8 14 80-93 8-21 (171)
354 d1z0ja1 c.37.1.8 (A:2-168) Rab 30.4 12 0.00085 26.8 2.2 15 80-94 7-21 (167)
355 d1e0ca2 c.46.1.2 (A:136-271) S 30.4 21 0.0015 24.7 3.4 36 278-313 87-123 (136)
356 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 30.4 12 0.00086 26.9 2.2 14 80-93 6-19 (170)
357 d1mkya2 c.37.1.8 (A:173-358) P 30.4 12 0.00085 27.4 2.2 15 79-93 10-24 (186)
358 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 30.0 12 0.00087 27.3 2.2 14 80-93 5-18 (184)
359 d1yioa2 c.23.1.1 (A:3-130) Res 29.9 53 0.0039 21.9 5.7 28 298-325 41-68 (128)
360 g1qtn.1 c.17.1.1 (A:,B:) Caspa 29.6 58 0.0042 24.7 6.5 49 278-327 10-79 (242)
361 d1rrma_ e.22.1.2 (A:) Lactalde 29.4 45 0.0033 27.6 6.2 73 264-336 15-94 (385)
362 d1zcba2 c.37.1.8 (A:47-75,A:20 29.2 12 0.00091 27.5 2.2 14 80-93 5-18 (200)
363 d1susa1 c.66.1.1 (A:21-247) Ca 29.0 1.1E+02 0.0079 23.0 10.8 120 63-214 43-164 (227)
364 d1mh1a_ c.37.1.8 (A:) Rac {Hum 29.0 13 0.00093 27.1 2.2 15 80-94 8-22 (183)
365 d1ctqa_ c.37.1.8 (A:) cH-p21 R 28.9 11 0.00082 26.9 1.8 15 80-94 6-20 (166)
366 d1qkka_ c.23.1.1 (A:) Transcri 28.6 40 0.0029 23.1 4.8 14 357-370 102-115 (140)
367 d1nyta1 c.2.1.7 (A:102-271) Sh 28.6 23 0.0017 25.5 3.6 48 75-130 16-63 (170)
368 d1puia_ c.37.1.8 (A:) Probable 28.5 11 0.00082 27.3 1.8 15 79-93 18-32 (188)
369 d1m7ba_ c.37.1.8 (A:) RhoE (RN 28.3 15 0.0011 26.7 2.5 15 80-94 5-19 (179)
370 d1x3sa1 c.37.1.8 (A:2-178) Rab 27.4 12 0.00086 27.2 1.7 14 80-93 10-23 (177)
371 d2bv3a2 c.37.1.8 (A:7-282) Elo 27.2 16 0.0012 29.1 2.5 18 78-95 7-24 (276)
372 d1p6xa_ c.37.1.1 (A:) Thymidin 27.2 14 0.001 30.4 2.2 48 351-402 284-331 (333)
373 d1xtqa1 c.37.1.8 (A:3-169) GTP 27.1 16 0.0012 25.9 2.5 15 79-93 6-20 (167)
374 d1krwa_ c.23.1.1 (A:) NTRC rec 27.1 80 0.0058 20.8 11.2 87 109-228 4-90 (123)
375 d1zh2a1 c.23.1.1 (A:2-120) Tra 27.0 47 0.0035 21.9 4.9 29 282-310 3-31 (119)
376 d2ngra_ c.37.1.8 (A:) CDC42 {H 26.9 16 0.0012 26.8 2.5 15 80-94 6-20 (191)
377 d1egaa1 c.37.1.8 (A:4-182) GTP 26.8 15 0.0011 26.4 2.3 14 80-93 8-21 (179)
378 g1pyo.1 c.17.1.1 (A:,B:) Caspa 26.1 53 0.0039 25.3 5.7 48 279-327 26-87 (257)
379 d2ayxa1 c.23.1.1 (A:817-949) S 26.1 71 0.0051 21.5 5.8 30 281-310 10-39 (133)
380 d1tf5a4 c.37.1.19 (A:396-570) 26.0 1.1E+02 0.0079 22.0 7.0 72 86-165 15-89 (175)
381 d2atxa1 c.37.1.8 (A:9-193) Rho 25.7 14 0.001 27.1 1.8 14 80-93 12-25 (185)
382 d1osna_ c.37.1.1 (A:) Thymidin 25.5 25 0.0018 28.7 3.6 15 80-94 8-22 (331)
383 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 25.0 14 0.001 27.0 1.8 15 80-94 5-19 (200)
384 d2r25b1 c.23.1.1 (B:1087-1214) 24.9 91 0.0067 20.7 6.2 47 182-230 51-97 (128)
385 d1nvta1 c.2.1.7 (A:111-287) Sh 24.8 48 0.0035 23.8 4.9 48 75-131 16-63 (177)
386 d1qkka_ c.23.1.1 (A:) Transcri 24.7 97 0.0071 20.9 10.4 42 182-226 44-85 (140)
387 d1ys7a2 c.23.1.1 (A:7-127) Tra 24.5 90 0.0065 20.5 10.7 84 109-225 2-85 (121)
388 d2bmja1 c.37.1.8 (A:66-240) Ce 23.6 18 0.0013 26.2 2.2 16 79-94 7-22 (175)
389 d1o54a_ c.66.1.13 (A:) Hypothe 23.4 39 0.0028 26.4 4.3 51 253-305 173-223 (266)
390 g1f2t.1 c.37.1.12 (A:,B:) Rad5 23.1 24 0.0017 27.6 3.0 38 183-220 226-264 (292)
391 d1yl7a1 c.2.1.3 (A:2-105,A:215 22.4 1.1E+02 0.008 20.7 7.7 64 280-344 45-109 (135)
392 d1svsa1 c.37.1.8 (A:32-60,A:18 22.4 19 0.0014 26.2 2.1 14 80-93 5-18 (195)
393 d1p77a1 c.2.1.7 (A:102-272) Sh 22.1 36 0.0026 24.5 3.6 49 75-131 16-64 (171)
394 d1yt8a3 c.46.1.2 (A:373-529) T 22.0 28 0.002 24.6 2.9 37 277-313 56-93 (157)
395 d1z3ix1 c.37.1.19 (X:390-735) 21.1 1.9E+02 0.014 23.1 10.7 97 85-192 97-199 (346)
396 d1xzpa2 c.37.1.8 (A:212-371) T 20.9 10 0.00073 26.9 0.1 15 80-94 3-17 (160)
397 d1xxaa_ d.74.2.1 (A:) C-termin 20.4 46 0.0033 19.9 3.2 22 281-302 49-70 (71)
398 d1vlja_ e.22.1.2 (A:) NADH-dep 20.3 1.6E+02 0.012 24.0 8.1 73 265-337 20-100 (398)
No 1
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.2e-38 Score=266.98 Aligned_cols=207 Identities=65% Similarity=0.999 Sum_probs=194.6
Q ss_pred ccccCccCCCCCHHHHHHHHhCCCCCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcc
Q 015093 37 EVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAP 116 (413)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P 116 (413)
+...+|+++++++.+.++|++.||..|+++|..+++.+++|+|+++.+|||||||++|++|+++.+......++++|++|
T Consensus 14 ~~~~sF~~l~L~~~l~~~L~~~g~~~pt~IQ~~aIp~il~g~dvi~~a~TGSGKTlayllPil~~l~~~~~~~~~lil~P 93 (222)
T d2j0sa1 14 DVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAP 93 (222)
T ss_dssp CCCCSGGGGCCCHHHHHHHHHHTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHTCCTTSCSCCEEEECS
T ss_pred CCCCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCeEEEcCcchhhhhhhcccccccccccccCceeEEecc
Confidence 33468999999999999999999999999999999999999999999999999999999999999988877889999999
Q ss_pred cHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhc
Q 015093 117 TRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLS 196 (413)
Q Consensus 117 ~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~ 196 (413)
|++|+.|.++.+++++...++++..+.|+.........+..+++|+|+||+.+.+++......+.+++++|+||||.+.+
T Consensus 94 treLa~Qi~~~~~~l~~~~~i~~~~~~g~~~~~~~~~~l~~~~~Ilv~TPgrl~~~~~~~~~~~~~l~~lVlDEaD~ll~ 173 (222)
T d2j0sa1 94 TRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLN 173 (222)
T ss_dssp SHHHHHHHHHHHHHHTTTTTCCEEEECTTSCHHHHHHHHHHCCSEEEECHHHHHHHHHTTSSCCTTCCEEEEETHHHHTS
T ss_pred hHHHHHHHHHHHHHHhCccceeEEEEeecccchhhHHHhccCCeEEeCCCCcHHhcccccccccccceeeeecchhHhhh
Confidence 99999999999999999899999999999988888777778899999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHhhCCCCceEEEEeeeCChhHHHHHHHhcCCCEEEEe
Q 015093 197 RGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILV 243 (413)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~~~~~~~~~~~~~~ 243 (413)
.++...+..+++.++...|++++|||.+++..++.+.++.+|+.+.+
T Consensus 174 ~~f~~~i~~I~~~l~~~~Q~ilfSAT~~~~v~~l~~~~l~~Pv~I~V 220 (222)
T d2j0sa1 174 KGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILV 220 (222)
T ss_dssp TTTHHHHHHHHTTSCTTCEEEEEESCCCHHHHTTGGGTCSSCEEECC
T ss_pred cCcHHHHHHHHHhCCCCCEEEEEEEeCCHHHHHHHHHHCCCCEEEEE
Confidence 99999999999999999999999999999888999999999887654
No 2
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=4.2e-37 Score=255.93 Aligned_cols=203 Identities=38% Similarity=0.635 Sum_probs=188.2
Q ss_pred ccCccCCCCCHHHHHHHHhCCCCCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccH
Q 015093 39 YDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTR 118 (413)
Q Consensus 39 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~ 118 (413)
..+|+++++++++.+++.+.||..|+++|..+++.+++|+|+++.+|||||||++|++|+++.+.....++.+++++|++
T Consensus 2 ~~~F~~l~L~~~l~~~l~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlayllP~l~~~~~~~~~~~~lil~pt~ 81 (206)
T d1veca_ 2 GNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTR 81 (206)
T ss_dssp CSSGGGSCCCHHHHHHHHTTTCCSCCHHHHHHHHHHHTTCCEEEECCSSSTTHHHHHHHHHHHCCTTSCSCCEEEECSCH
T ss_pred CCChhccCcCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEeeccCccccccccccchhhcccccccCcceEEEeecc
Confidence 36899999999999999999999999999999999999999999999999999999999999998888888999999999
Q ss_pred HHHHHHHHHHHHhhccc-CceEEEEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhcc
Q 015093 119 ELAQQIEKVMRALGDYM-GVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR 197 (413)
Q Consensus 119 ~l~~q~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~ 197 (413)
+|+.|..+.+..+.... +.......|+.........+...++|+|+||+++...+......+++++++|+||||.+.+.
T Consensus 82 el~~q~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ivv~TPgrl~~~~~~~~~~~~~l~~lVlDEaD~ll~~ 161 (206)
T d1veca_ 82 ELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQ 161 (206)
T ss_dssp HHHHHHHHHHHHHTTTSSSCCEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHTTCSCCTTCCEEEEETHHHHTST
T ss_pred hhhHHHHHHHHHHhhcccCcccccccCCccHHHHHHHHHhccCeEEeCCccccccccchhccccccceEEEecccccccc
Confidence 99999999998876654 46777777888777777777788999999999999999999889999999999999999999
Q ss_pred CcHHHHHHHHhhCCCCceEEEEeeeCChhHHHHHHHhcCCCEEE
Q 015093 198 GFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRI 241 (413)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~~~~~~~~~~~~ 241 (413)
+|...+..+++.++++.|++++|||+++...++.+.++.+|..+
T Consensus 162 ~f~~~i~~I~~~~~~~~Q~~l~SAT~~~~v~~l~~~~l~~P~~I 205 (206)
T d1veca_ 162 DFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLEKPYEI 205 (206)
T ss_dssp TTHHHHHHHHHHSCTTCEEEEEESCCCHHHHHHHHHHCSSCEEE
T ss_pred chHHHHHHHHHhCCCCCEEEEEEecCCHHHHHHHHHHCCCCEEE
Confidence 99999999999999999999999999999999999999998754
No 3
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.4e-37 Score=259.01 Aligned_cols=212 Identities=67% Similarity=1.056 Sum_probs=191.2
Q ss_pred ccccccccCccCCCCCHHHHHHHHhCCCCCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEE
Q 015093 33 VSYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQAL 112 (413)
Q Consensus 33 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~l 112 (413)
.++.++..+|+++++++.+.+++.+.||..|+++|..+++.++.|+|+++++|||||||++|++|+++.+.....+++++
T Consensus 5 ~~~~e~i~sF~~l~L~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlayllp~l~~i~~~~~~~~al 84 (218)
T d2g9na1 5 SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQAL 84 (218)
T ss_dssp CCCCCCCCCGGGSCCCHHHHHHHHHHTCCSCCHHHHHHHHHHHHTCCEEEECCTTSSHHHHHHHHHHHHCCTTCCSCCEE
T ss_pred CCCCCccCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEEEcccchhhhhhhhhhhhheecccccCccEE
Confidence 45668889999999999999999999999999999999999999999999999999999999999999998877788999
Q ss_pred EEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHH-HHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccc
Q 015093 113 VLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQ-RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEA 191 (413)
Q Consensus 113 vl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~ 191 (413)
|++|+++|+.|.++.+.++....+.......++....... ......++|+|+||+.+..++.+....+++++++|+|||
T Consensus 85 il~Pt~eL~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IvV~TP~rl~~~l~~~~~~~~~l~~lVlDEa 164 (218)
T d2g9na1 85 VLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEA 164 (218)
T ss_dssp EECSSHHHHHHHHHHHHHHHTTTTCCEEEECC--CCCSTTTSSSSCCCSEEEECHHHHHHHHHTTSSCSTTCCEEEEESH
T ss_pred EEcccchhhhhHHHHHhhhccccceeEEeeecccchhHHHHHHhcCCCEEEEeCChhHHHHHhcCCcccccceEEEeeec
Confidence 9999999999999999999999888888887765543332 222346799999999999999998888999999999999
Q ss_pred hhhhccCcHHHHHHHHhhCCCCceEEEEeeeCChhHHHHHHHhcCCCEEEEec
Q 015093 192 DEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVK 244 (413)
Q Consensus 192 h~~~~~~~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~~~~~~~~~~~~~~~ 244 (413)
|.+.+.++...+..+++.++.+.|++++|||.+++...+.+.++.+|+.+.+.
T Consensus 165 D~ll~~~f~~~~~~Il~~~~~~~Q~il~SAT~~~~v~~~~~~~l~~pv~i~v~ 217 (218)
T d2g9na1 165 DEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVK 217 (218)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTCEEEEEESCCCHHHHHHHHHHCSSCEEEECC
T ss_pred chhhcCchHHHHHHHHHhCCCCCeEEEEEecCCHHHHHHHHHHCCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999877653
No 4
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.1e-36 Score=254.20 Aligned_cols=208 Identities=61% Similarity=0.921 Sum_probs=186.1
Q ss_pred cccccccCccCCCCCHHHHHHHHhCCCCCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEE
Q 015093 34 SYDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALV 113 (413)
Q Consensus 34 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lv 113 (413)
.++++..+|+++++++++.+++.+.||..|+++|..+++.++.|+|+++.+|||||||++|++++++.+.....++.+++
T Consensus 4 ~~~~~~~sF~~l~l~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~a~~lp~i~~l~~~~~~~~~li 83 (212)
T d1qdea_ 4 NYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALM 83 (212)
T ss_dssp SCCCCCCCGGGGTCCHHHHHHHHHHTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHHCCTTCCSCCEEE
T ss_pred CCcccccChhhCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEeecccccchhhhhHhhhHhhhhccCCCcceEE
Confidence 56778899999999999999999999999999999999999999999999999999999999999999988888889999
Q ss_pred EcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchh
Q 015093 114 LAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADE 193 (413)
Q Consensus 114 l~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~ 193 (413)
++|+++++.|....+..+............++.....+.... .+++|+|+||+++...+..+...+.+++++|+||||.
T Consensus 84 l~pt~el~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~IvI~TP~~l~~~~~~~~~~l~~l~~lVlDEad~ 162 (212)
T d1qdea_ 84 LAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGL-RDAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADE 162 (212)
T ss_dssp ECSSHHHHHHHHHHHHHHTTTSCCCEEEECC----------C-TTCSEEEECHHHHHHHHHTTSSCCTTCCEEEEETHHH
T ss_pred EcccHHHhhhhhhhhcccccccccceeeEeeccchhHHHHHh-cCCcEEEECCCccccccccCceecCcceEEeehhhhh
Confidence 999999999999999999888888888888777665554443 3579999999999999999999999999999999999
Q ss_pred hhccCcHHHHHHHHhhCCCCceEEEEeeeCChhHHHHHHHhcCCCEEEE
Q 015093 194 MLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRIL 242 (413)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~~~~~~~~~~~~~ 242 (413)
+.+.++...+..+++.++.++|++++|||.++....+.+.++.+|..+.
T Consensus 163 lld~~f~~~v~~I~~~~~~~~Q~vl~SAT~~~~v~~l~~~~l~~Pv~i~ 211 (212)
T d1qdea_ 163 MLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRIL 211 (212)
T ss_dssp HHHTTCHHHHHHHHHHSCTTCEEEEEESSCCHHHHHHHHHHCSSCEEEC
T ss_pred hcccchHHHHHHHHHhCCCCCeEEEEEeeCCHHHHHHHHHHCCCCEEEe
Confidence 9999999999999999999999999999999999999999999987653
No 5
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3e-36 Score=250.97 Aligned_cols=202 Identities=42% Similarity=0.639 Sum_probs=183.3
Q ss_pred CccCCCCCHHHHHHHHhCCCCCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHH
Q 015093 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTREL 120 (413)
Q Consensus 41 ~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l 120 (413)
.|+++++++++.+++.+.||..|+++|..+++.+++|+|+++.+|||||||++|++|+++.+.....++++++++|+++|
T Consensus 2 ~F~dl~L~~~l~~~l~~~g~~~pt~iQ~~aip~il~g~dvl~~A~TGsGKTla~~lp~l~~~~~~~~~~~~lil~PtreL 81 (207)
T d1t6na_ 2 GFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTREL 81 (207)
T ss_dssp CSTTSCCCHHHHHHHHHTTCCCCCHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHCCCCTTCCCEEEECSCHHH
T ss_pred CccccCcCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCeEEEeccccccccccccceeeeecccCCCceEEEEeccchh
Confidence 58999999999999999999999999999999999999999999999999999999999999888888899999999999
Q ss_pred HHHHHHHHHHhhcccC-ceEEEEECCcchHHHHHH-HhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhcc-
Q 015093 121 AQQIEKVMRALGDYMG-VKVHACVGGTSVREDQRI-LSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR- 197 (413)
Q Consensus 121 ~~q~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~- 197 (413)
+.|..+.++.+....+ .......|+......... ....++|+|+||+.+..++....+.++++.++|+||||.+.+.
T Consensus 82 ~~qi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ilI~TP~rl~~~~~~~~~~l~~l~~lVlDEaD~ll~~~ 161 (207)
T d1t6na_ 82 AFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQL 161 (207)
T ss_dssp HHHHHHHHHHHTTTSTTCCEEEESCCSCHHHHHHHHHHSCCSEEEECHHHHHHHHHTTSSCCTTCCEEEEESHHHHHSSH
T ss_pred hHHHHHHHHHHHhhCCCceeEEEeccccHHHHHHHHHhcCCCEEEeCcchhhhhccCCceeccccceeehhhhhhhhhcC
Confidence 9999999999987653 567777787776655444 3567899999999999999998889999999999999998874
Q ss_pred CcHHHHHHHHhhCCCCceEEEEeeeCChhHHHHHHHhcCCCEEEE
Q 015093 198 GFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRIL 242 (413)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~~~~~~~~~~~~~ 242 (413)
++...+..+++.++++.|++++|||.+++..++.+.++.+|..+.
T Consensus 162 ~~~~~i~~I~~~~~~~~Q~il~SAT~~~~v~~l~~~~l~~P~~I~ 206 (207)
T d1t6na_ 162 DMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 206 (207)
T ss_dssp HHHHHHHHHHHTSCSSSEEEEEESCCCTTTHHHHHTTCSSCEEEE
T ss_pred CcHHHHHHHHHhCCCCCEEEEEeeeCCHHHHHHHHHHCCCCEEEe
Confidence 788889999999999999999999999999999999999987664
No 6
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=2.7e-35 Score=245.73 Aligned_cols=202 Identities=35% Similarity=0.595 Sum_probs=183.7
Q ss_pred ccCccCCCCCHHHHHHHHhCCCCCCcHHHHhhhhhhhCCC-cEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEccc
Q 015093 39 YDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGL-DVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPT 117 (413)
Q Consensus 39 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~~~~~~-~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~ 117 (413)
+.+|+++++++++.+++.+.||..|+++|.++++.++.|+ ++++++|||+|||++|++++++..... .+++++|++|+
T Consensus 3 ~msf~~l~l~~~l~~~l~~~g~~~pt~iQ~~~ip~~l~g~~d~iv~a~TGsGKT~~~~l~~~~~~~~~-~~~~~lil~pt 81 (208)
T d1hv8a1 3 YMNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIELVNEN-NGIEAIILTPT 81 (208)
T ss_dssp CCCGGGSSCCHHHHHHHHHHTCCSCCHHHHHHHHHHHHTCSEEEEECCSSSSHHHHHHHHHHHHSCSS-SSCCEEEECSC
T ss_pred ccCHHHcCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCCeeeechhcccccceeecccccccccc-cCcceEEEeec
Confidence 4689999999999999999999999999999999998875 899999999999999999998876544 46799999999
Q ss_pred HHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhcc
Q 015093 118 RELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR 197 (413)
Q Consensus 118 ~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~ 197 (413)
++|+.|..+.+..+....+.++....|+.....+.+... +++|+|+||+.|.+++.++...+++++++|+||||.+.+.
T Consensus 82 ~~l~~q~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~l~-~~~IlV~TP~~l~~~l~~~~~~~~~l~~lViDEad~l~~~ 160 (208)
T d1hv8a1 82 RELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALK-NANIVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNM 160 (208)
T ss_dssp HHHHHHHHHHHHHHHCSSCCCEEEECTTSCHHHHHHHHH-TCSEEEECHHHHHHHHHTTCSCTTSCCEEEEETHHHHHTT
T ss_pred cccchhhhhhhhhhcccCCeEEEEeeCCCChHHHHHhcC-CCCEEEEChHHHHHHHHcCCCCcccCcEEEEEChHHhhcC
Confidence 999999999999999988999999999887776655544 5899999999999999998888999999999999999999
Q ss_pred CcHHHHHHHHhhCCCCceEEEEeeeCChhHHHHHHHhcCCCEEEE
Q 015093 198 GFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRIL 242 (413)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~~~~~~~~~~~~~ 242 (413)
++...+..+++.+++++|++++|||++++..++.+.++.++..+.
T Consensus 161 ~~~~~i~~I~~~~~~~~Q~i~~SAT~~~~v~~~~~~~l~~~~~I~ 205 (208)
T d1hv8a1 161 GFIKDVEKILNACNKDKRILLFSATMPREILNLAKKYMGDYSFIK 205 (208)
T ss_dssp TTHHHHHHHHHTSCSSCEEEEECSSCCHHHHHHHHHHCCSEEEEE
T ss_pred CChHHHHHHHHhCCCCCeEEEEEccCCHHHHHHHHHHCCCCeEEE
Confidence 999999999999999999999999999999999999998876654
No 7
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=4e-35 Score=244.70 Aligned_cols=204 Identities=42% Similarity=0.640 Sum_probs=192.7
Q ss_pred cCccCCCCCHHHHHHHHhCCCCCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHH
Q 015093 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRE 119 (413)
Q Consensus 40 ~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~ 119 (413)
++|+++++++.+.+++++.||..|+++|..+++.+++|+|+++.+|||||||++|+++++..+.....+.++++++|+..
T Consensus 1 ~sF~~l~L~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvi~~a~tGsGKTlay~lp~i~~~~~~~~~~~~~~~~~~~~ 80 (206)
T d1s2ma1 1 NTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRE 80 (206)
T ss_dssp CCGGGGCCCHHHHHHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHCCTTSCSCCEEEECSSHH
T ss_pred CChHHcCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEEecCCcchhhhhhccccccccccccccccceeeccchh
Confidence 47999999999999999999999999999999999999999999999999999999999999988888889999999999
Q ss_pred HHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccCc
Q 015093 120 LAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGF 199 (413)
Q Consensus 120 l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~~ 199 (413)
++.|....+..+....++++....|+.........+...++|+|+||+.|.+++......+.+++++|+||||.+.+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~Ili~TP~~l~~~l~~~~~~l~~l~~lV~DEaD~l~~~~f 160 (206)
T d1s2ma1 81 LALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDF 160 (206)
T ss_dssp HHHHHHHHHHHHTTTTTCCEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHTTCSCCTTCCEEEEESHHHHSSHHH
T ss_pred hhhhhhhhhhhcccccCeeEEeecCccchhhHHHHhcccceEEEECCcccccccccceeecccceEEEeechhhhhhhhh
Confidence 99999999999999999999999999988888888888999999999999999999999999999999999999999889
Q ss_pred HHHHHHHHhhCCCCceEEEEeeeCChhHHHHHHHhcCCCEEEEe
Q 015093 200 KDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILV 243 (413)
Q Consensus 200 ~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~~~~~~~~~~~~~~ 243 (413)
...+..+++.+++.+|++++|||++++..++...++.+|..+..
T Consensus 161 ~~~v~~I~~~l~~~~Q~il~SATl~~~v~~~~~~~l~~P~~I~~ 204 (206)
T d1s2ma1 161 KTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINL 204 (206)
T ss_dssp HHHHHHHHTTSCSSCEEEEEESCCCHHHHHHHHHHCSSCEEESC
T ss_pred HHHHHHHHHhCCCCCEEEEEEEeCCHHHHHHHHHHCCCCEEEEe
Confidence 99999999999999999999999999999999999998876543
No 8
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=100.00 E-value=4.2e-35 Score=249.03 Aligned_cols=209 Identities=31% Similarity=0.491 Sum_probs=189.6
Q ss_pred ccccccCccCCCCCHHHHHHHHhCCCCCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccc---------
Q 015093 35 YDEVYDSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYE--------- 105 (413)
Q Consensus 35 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~--------- 105 (413)
..+...+|+++++++++.+++.++||..|+++|..+++.+++|+|+++++|||||||++|++++++.+...
T Consensus 16 ~~~~~~~F~~l~l~~~l~~~L~~~g~~~pt~iQ~~~ip~il~g~dvvi~a~TGsGKTlayllp~l~~l~~~~~~~~~~~~ 95 (238)
T d1wrba1 16 ATNVIENFDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPIINHLVCQDLNQQRYSK 95 (238)
T ss_dssp CCSCCCSSGGGSCCCSTTTTTTTTTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHHHHTTCC------C
T ss_pred CCCccCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHhhhhhCCCCEEEECCCCCCcceeeHHHHHHHHHhcccccccccC
Confidence 34556899999999999999999999999999999999999999999999999999999999999987432
Q ss_pred cCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccE
Q 015093 106 SLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRM 185 (413)
Q Consensus 106 ~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~ 185 (413)
..+++++|++|+++|+.|..+.+..++...++++..+.|+.....+......+++|+|+||+.|..++......+.++++
T Consensus 96 ~~~~~alil~pt~el~~q~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ivV~TP~~l~~~~~~~~~~l~~v~~ 175 (238)
T d1wrba1 96 TAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIREVQMGCHLLVATPGRLVDFIEKNKISLEFCKY 175 (238)
T ss_dssp CBCCSEEEECSSHHHHHHHHHHHHHHHTTSSCCEEEECSSSCSHHHHHHHSSCCSEEEECHHHHHHHHHTTSBCCTTCCE
T ss_pred CCCceEEEeccchhhhcchheeeeecccCCCcEEEEEeccchhhHHHhhcccCCceeecCHHHHHhHHccCceeccccce
Confidence 33568999999999999999999999998899999999998888777777788999999999999999998888999999
Q ss_pred EEEccchhhhccCcHHHHHHHHhhCCC----CceEEEEeeeCChhHHHHHHHhcCCCEEEEe
Q 015093 186 FVLDEADEMLSRGFKDQIYDIFQHLPG----KIQVGVFSATMPPEALEITRKFMNKPVRILV 243 (413)
Q Consensus 186 iIiDE~h~~~~~~~~~~~~~~~~~~~~----~~~~i~lSAT~~~~~~~~~~~~~~~~~~~~~ 243 (413)
+|+||||.+.+.++...+..+++.+.. +.|++++|||++.++..+.+.++.+|+.+.+
T Consensus 176 lViDEaD~ll~~~f~~~i~~Il~~~~~~~~~~~Q~il~SAT~~~~v~~l~~~~~~~p~~i~v 237 (238)
T d1wrba1 176 IVLDEADRMLDMGFEPQIRKIIEESNMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTV 237 (238)
T ss_dssp EEEETHHHHHHTTCHHHHHHHHHSSCCCCGGGCEEEEEESSCCHHHHHHHHHHCSSCEEEEE
T ss_pred eeeehhhhhhhhccHHHHHHHHHHhcCCCCCCCEEEEEeeeCCHHHHHHHHHHCCCCEEEEe
Confidence 999999999999999999999987642 5699999999999999999999999877654
No 9
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=100.00 E-value=1.1e-34 Score=258.92 Aligned_cols=273 Identities=18% Similarity=0.146 Sum_probs=183.0
Q ss_pred hhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHH
Q 015093 73 PFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQ 152 (413)
Q Consensus 73 ~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (413)
.+.+++++++.+|||||||++++.+++...... +.+++|++|+++|++|+.++++.+...... . ...
T Consensus 5 ~~~~~~~~lv~~~TGsGKT~~~l~~~~~~~~~~--~~~~lvi~Ptr~La~q~~~~l~~~~~~~~~----~-------~~~ 71 (305)
T d2bmfa2 5 IFRKKRLTIMDLHPGAGKTKRYLPAIVREAIKR--GLRTLILAPTRVVAAEMEEALRGLPIRYQT----P-------AIR 71 (305)
T ss_dssp SSSTTCEEEECCCTTSSTTTTHHHHHHHHHHHH--TCCEEEEESSHHHHHHHHHHTTTSCCBCCC---------------
T ss_pred HhhcCCcEEEEECCCCCHHHHHHHHHHHHHHhc--CCEEEEEccHHHHHHHHHHHHhcCCcceee----e-------EEe
Confidence 345789999999999999998877777654433 358999999999999999887765332211 0 011
Q ss_pred HHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccCcHHHHHHHHhhC--CCCceEEEEeeeCChhHHHH
Q 015093 153 RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHL--PGKIQVGVFSATMPPEALEI 230 (413)
Q Consensus 153 ~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~~~~~~~~~~~~~--~~~~~~i~lSAT~~~~~~~~ 230 (413)
........++++|++.|....... ..+.+++++|+||+|++..+.+ ....++... ....+++++|||++.....
T Consensus 72 ~~~~~~~~i~~~t~~~l~~~~~~~-~~~~~~~~vViDE~H~~~~~~~--~~~~~l~~~~~~~~~~~v~~SAT~~~~~~~- 147 (305)
T d2bmfa2 72 AEHTGREIVDLMCHATFTMRLLSP-IRVPNYNLIIMDEAHFTDPASI--AARGYISTRVEMGEAAGIFMTATPPGSRDP- 147 (305)
T ss_dssp ----CCCSEEEEEHHHHHHHHTSS-SCCCCCSEEEEESTTCCSHHHH--HHHHHHHHHHHHTSCEEEEECSSCTTCCCS-
T ss_pred ecccCccccccCCcHHHHHHHhcC-ccccceeEEEeeeeeecchhhH--HHHHHHHHhhccccceEEEeecCCCcceee-
Confidence 112345689999999887766543 4456799999999998754321 122222221 2467899999999643211
Q ss_pred HHHhcCCCEEEEecCCccccCCceEEEEEeCccccHHHHHHHHHHhcCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeec
Q 015093 231 TRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATH 310 (413)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~ 310 (413)
...... .+.......... ..... ...+ ....++++|||++++.++.+++.|++.++.+..+|
T Consensus 148 ---~~~~~~------------~~~~~~~~~~~~-~~~~~-~~~~-~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~l~ 209 (305)
T d2bmfa2 148 ---FPQSNA------------PIMDEEREIPER-SWNSG-HEWV-TDFKGKTVWFVPSIKAGNDIAACLRKNGKKVIQLS 209 (305)
T ss_dssp ---SCCCSS------------CEEEEECCCCCS-CCSSC-CHHH-HSSCSCEEEECSCHHHHHHHHHHHHHHTCCCEECC
T ss_pred ---ecccCC------------cceEEEEeccHH-HHHHH-HHHH-HhhCCCEEEEeccHHHHHHHHHHHHhCCCCEEEeC
Confidence 000000 000000001110 00000 1111 22457899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcCCCeEEEEeCccccCCCCCCCCEEEEcC--------------------CCCChhHHHhhhccc
Q 015093 311 GDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD--------------------LPTQPENYLHRIGRS 370 (413)
Q Consensus 311 ~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~d~~~~~~vi~~~--------------------~~~s~~~~~Q~~GR~ 370 (413)
|++.... ...+++|..+++++|++++.|+|+ .++.||..+ .|.|..+|.||+||+
T Consensus 210 ~~~~~~~----~~~~~~~~~~~lvaT~~~~~G~~~-~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Qr~GR~ 284 (305)
T d2bmfa2 210 RKTFDSE----YIKTRTNDWDFVVTTDISEMGANF-KAERVIDPRRCMKPVILTDGEERVILAGPMPVTHSSAAQRRGRV 284 (305)
T ss_dssp TTCHHHH----GGGGGTSCCSEEEECGGGGTTCCC-CCSEEEECCEEEEEEEECSSSCEEEEEEEEECCHHHHHHHHTTS
T ss_pred CcChHHH----HhhhhccchhhhhhhHHHHhcCCC-CccEEEEcCCceeeeEecCCCCceEEeccccCCHHHHhhhhcCc
Confidence 9986443 346788999999999999999999 455655322 356889999999999
Q ss_pred CCCCCcceEEEEecc
Q 015093 371 GRFGRKGVAINFVTR 385 (413)
Q Consensus 371 ~R~g~~g~~~~~~~~ 385 (413)
||.|+.+....++..
T Consensus 285 GR~~~~~~~~~~~~~ 299 (305)
T d2bmfa2 285 GRNPKNENDQYIYMG 299 (305)
T ss_dssp SCSSSCCCEEEEECS
T ss_pred CcCCCCceEEEEECC
Confidence 999987766666553
No 10
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00 E-value=5.1e-33 Score=233.23 Aligned_cols=203 Identities=33% Similarity=0.524 Sum_probs=179.5
Q ss_pred CccCCCCCHHHHHHHHhCCCCCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHH
Q 015093 41 SFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTREL 120 (413)
Q Consensus 41 ~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l 120 (413)
.|+++++++++.+.+++.||..|+++|.++++.++.|+|+++++|||||||++|++++++.+.........++++|+..+
T Consensus 2 ~F~~l~L~~~l~~~l~~~g~~~pt~iQ~~aip~~l~G~dvii~a~TGSGKTlayllp~l~~~~~~~~~~~~~~~~~~~~~ 81 (209)
T d1q0ua_ 2 QFTRFPFQPFIIEAIKTLRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLLPIMEKIKPERAEVQAVITAPTREL 81 (209)
T ss_dssp CGGGSCCCHHHHHHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCSSHHHHHHHHHHHHHHCCTTSCSCCEEEECSSHHH
T ss_pred ccccCCcCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCeEeecccccccceeeeeeeccccccccccccccccccccch
Confidence 68999999999999999999999999999999999999999999999999999999999999888778889999999999
Q ss_pred HHHHHHHHHHhhccc----CceEEEEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhc
Q 015093 121 AQQIEKVMRALGDYM----GVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLS 196 (413)
Q Consensus 121 ~~q~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~ 196 (413)
+.+....+....... ...+....++............+++|+|+||+.+...+.+....+.+++++|+||||.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ilv~TP~~l~~~~~~~~~~~~~l~~lViDEad~ll~ 161 (209)
T d1q0ua_ 82 ATQIYHETLKITKFCPKDRMIVARCLIGGTDKQKALEKLNVQPHIVIGTPGRINDFIREQALDVHTAHILVVDEADLMLD 161 (209)
T ss_dssp HHHHHHHHHHHHTTSCGGGCCCEEEECCCSHHHHTTCCCSSCCSEEEECHHHHHHHHHTTCCCGGGCCEEEECSHHHHHH
T ss_pred hHHHHHHHHhhhccccccccccccccccchhhHHHHHHhccCceEEEecCchhhhhhhhhccccccceEEEEeecccccc
Confidence 998888777654443 3455566666654444444456789999999999999999888889999999999999999
Q ss_pred cCcHHHHHHHHhhCCCCceEEEEeeeCChhHHHHHHHhcCCCEEEEe
Q 015093 197 RGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILV 243 (413)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~~~~~~~~~~~~~~ 243 (413)
.++...+..++..++++.|++++|||++++..++++.++.+|..+.+
T Consensus 162 ~~f~~~v~~I~~~~~~~~Q~il~SATl~~~v~~l~~~~l~~p~~i~V 208 (209)
T d1q0ua_ 162 MGFITDVDQIAARMPKDLQMLVFSATIPEKLKPFLKKYMENPTFVHV 208 (209)
T ss_dssp TTCHHHHHHHHHTSCTTCEEEEEESCCCGGGHHHHHHHCSSCEEEEC
T ss_pred cccHHHHHHHHHHCCCCCEEEEEEccCCHHHHHHHHHHCCCCEEEEe
Confidence 99999999999999999999999999999999999999998876653
No 11
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=4.9e-32 Score=215.35 Aligned_cols=161 Identities=63% Similarity=1.012 Sum_probs=149.9
Q ss_pred ceEEEEEeCccccHHHHHHHHHHhcCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeE
Q 015093 253 IKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332 (413)
Q Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~v 332 (413)
+++++..+...+.+.+.|..+++..+..++||||+++..++.+++.|...++.+..+||+++..+|.++++.|+.|+.++
T Consensus 1 I~q~~~~v~~~e~K~~~L~~ll~~~~~~k~iIF~~s~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~l~~f~~~~~~i 80 (162)
T d1fuka_ 1 IKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRI 80 (162)
T ss_dssp CEEEEEEEESGGGHHHHHHHHHHHTTCSCEEEEESSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTSCSE
T ss_pred CEEEEEEeCCcHHHHHHHHHHHHhCCCCcEEEEEEEEchHHHHHHHHhhcCceEEEeccCCchhhHHHHHHHHhhcccce
Confidence 35777778777889999999999999899999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCccccCCCCCCCCEEEEcCCCCChhHHHhhhcccCCCCCcceEEEEeccccHHHHHHHHHHhccccccCCcchhcc
Q 015093 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPANVADL 412 (413)
Q Consensus 333 li~t~~~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (413)
||||+++++|+|+|++++||++++|+++..|+||+||+||.|+.|.|++++++.+...+..+.++++..++.+|.++.+|
T Consensus 81 Lv~Tdv~~rGiDi~~v~~VI~~d~P~~~~~yihR~GR~gR~g~~g~~i~~~~~~d~~~~~~i~~~~~~~~~~ip~~~~~l 160 (162)
T d1fuka_ 81 LISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELPSDIATL 160 (162)
T ss_dssp EEEEGGGTTTCCCCSCSEEEESSCCSSGGGGGGSSCSCC-----CEEEEEEETTTHHHHHHHHHHSSCCCEECCSCCTTT
T ss_pred eeccccccccccCCCceEEEEeccchhHHHHHhhccccccCCCccEEEEEcCHHHHHHHHHHHHHHcCcCCCCChHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred C
Q 015093 413 I 413 (413)
Q Consensus 413 ~ 413 (413)
+
T Consensus 161 ~ 161 (162)
T d1fuka_ 161 L 161 (162)
T ss_dssp T
T ss_pred h
Confidence 5
No 12
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=4.7e-32 Score=216.60 Aligned_cols=167 Identities=69% Similarity=1.142 Sum_probs=160.9
Q ss_pred ccccCCceEEEEEeCccccHHHHHHHHHHhcCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHh
Q 015093 247 ELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFR 326 (413)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~ 326 (413)
+.+.+++++++..++....+...|..+++.....++||||++++.++.+++.|...++.+..+||+++..+|.++++.|+
T Consensus 2 ~~tl~~i~q~~v~v~~~~~K~~~L~~ll~~~~~~k~iiF~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~fk 81 (168)
T d2j0sa2 2 ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFR 81 (168)
T ss_dssp GCSCTTEEEEEEEESSTTHHHHHHHHHHHHHTSSEEEEECSSHHHHHHHHHHHHHTTCCCEEECTTSCHHHHHHHHHHHH
T ss_pred CCCCCCcEEEEEEecChHHHHHHHHHHHHhCCCCceEEEeeeHHHHHHHHHHhhhcccchhhhhhhhhHHHHHHHHHHHh
Confidence 45678999999999988889999999999998899999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEeCccccCCCCCCCCEEEEcCCCCChhHHHhhhcccCCCCCcceEEEEeccccHHHHHHHHHHhccccccCC
Q 015093 327 SGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELP 406 (413)
Q Consensus 327 ~~~~~vli~t~~~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (413)
+|+.++||||+++++|+|+|++++||++++|++...|+||+||+||.|+.|.+++++.+.+...+..+++++...++.+|
T Consensus 82 ~g~~~iLv~Td~~~rGiDi~~v~~VIn~d~P~~~~~yihR~GR~gR~g~~G~~i~~~~~~d~~~~~~i~~~~~~~i~e~p 161 (168)
T d2j0sa2 82 SGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMP 161 (168)
T ss_dssp HTSSCEEEECGGGSSSCCCTTEEEEEESSCCSSHHHHHHHHTTSSGGGCCEEEEEEEEGGGHHHHHHHHHHTTCCCEECC
T ss_pred cCCccEEeccchhcccccccCcceEEEecCCcCHHHHHhhhccccccCCCcEEEEEECHHHHHHHHHHHHHHcCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhccC
Q 015093 407 ANVADLI 413 (413)
Q Consensus 407 ~~~~~~~ 413 (413)
.++.|++
T Consensus 162 ~~~~dii 168 (168)
T d2j0sa2 162 MNVADLI 168 (168)
T ss_dssp SCCTTTC
T ss_pred cChHHhC
Confidence 9999875
No 13
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97 E-value=1.6e-30 Score=209.21 Aligned_cols=164 Identities=40% Similarity=0.693 Sum_probs=156.0
Q ss_pred cccCCceEEEEEeCccccHHHHHHHHHHhcCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhc
Q 015093 248 LTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRS 327 (413)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~ 327 (413)
.+++++.+++..++. ..+...|.++++....+++||||++++.++.++..|...|+.+..+||+++..+|.++++.|++
T Consensus 2 ~tl~~i~q~yi~v~~-~~K~~~L~~ll~~~~~~k~iVF~~~~~~~~~l~~~L~~~g~~~~~~h~~~~~~~r~~~~~~f~~ 80 (171)
T d1s2ma2 2 LTLKGITQYYAFVEE-RQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQ 80 (171)
T ss_dssp CBCTTEEEEEEECCG-GGHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHTCCEEEECTTSCHHHHHHHHHHHHT
T ss_pred CCccceEEEEEEcCH-HHHHHHHHHHHHhCCCCceEEEEeeeehhhHhHHhhhcccccccccccccchhhhhhhhhhccc
Confidence 456788999888776 6799999999999988999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeCccccCCCCCCCCEEEEcCCCCChhHHHhhhcccCCCCCcceEEEEeccccHHHHHHHHHHhccccccCCc
Q 015093 328 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEELPA 407 (413)
Q Consensus 328 ~~~~vli~t~~~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (413)
|..++||||+++++|+|+|++++||++++|+++..|+||+||+||.|+.|.|+.|+++.+...+..+.++++...+++|.
T Consensus 81 ~~~~ilv~Td~~~~Gid~~~v~~VI~~d~p~~~~~y~qr~GR~gR~g~~g~~i~~v~~~e~~~~~~i~~~l~~~~~~~p~ 160 (171)
T d1s2ma2 81 GKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYKIEQELGTEIAAIPA 160 (171)
T ss_dssp TSSSEEEESSCSSSSCCCTTEEEEEESSCCSSHHHHHHHHCBSSCTTCCEEEEEEECGGGHHHHHHHHHHHTCCCEECCS
T ss_pred CccccccchhHhhhccccceeEEEEecCCcchHHHHHHHhhhcccCCCccEEEEEeCHHHHHHHHHHHHHHCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred chhcc
Q 015093 408 NVADL 412 (413)
Q Consensus 408 ~~~~~ 412 (413)
++-+.
T Consensus 161 ~~d~~ 165 (171)
T d1s2ma2 161 TIDKS 165 (171)
T ss_dssp SCCGG
T ss_pred ccchh
Confidence 87653
No 14
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=1.6e-29 Score=201.97 Aligned_cols=160 Identities=44% Similarity=0.786 Sum_probs=147.0
Q ss_pred ccCCceEEEEEeCccccHHHHHHHHHHhcCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcC
Q 015093 249 TLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG 328 (413)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~ 328 (413)
++.++++++..++....++..|..+++....+++||||++++.++.++..|.+.++++..+||++++.+|.++++.|++|
T Consensus 2 tl~~ikq~y~~~~~~~~K~~~L~~ll~~~~~~~~lIF~~~~~~~~~l~~~l~~~~~~~~~~hg~~~~~~R~~~~~~F~~g 81 (168)
T d2rb4a1 2 TLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDG 81 (168)
T ss_dssp CBCCEEEEEEECSSHHHHHHHHHHHHTTSCCSEEEEECSCHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHTT
T ss_pred CccccEEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEcCHHHHHHHHHHHHHhcCCcceecccchhhHHHHHHhhhhcCC
Confidence 45778888888887788999999999998889999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCccccCCCCCCCCEEEEcCCCCC------hhHHHhhhcccCCCCCcceEEEEeccccHHHHHHHHHHhcccc
Q 015093 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQ------PENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVI 402 (413)
Q Consensus 329 ~~~vli~t~~~~~G~d~~~~~~vi~~~~~~s------~~~~~Q~~GR~~R~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (413)
+.++||||+++++|+|+|++++||+++.|.+ ..+|+||+||+||.|++|.|+.|+++.+...+..+.+++...+
T Consensus 82 ~~~ilv~Td~~~~Gid~~~v~~Vi~yd~P~~~~~~~~~~~yihR~GR~gR~g~~g~~i~~~~~~d~~~l~~i~~~~~~~i 161 (168)
T d2rb4a1 82 KEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFNSSI 161 (168)
T ss_dssp SCSEEEECCSCCTTTCCTTEEEEEESSCCC--CCSCCHHHHHHHHCBC----CCEEEEEEECGGGHHHHHHHHHHHTCCC
T ss_pred ceeeeechhhhhhhhccccccEEEeecCCCcccccCCHHHHHHHhhhcccCCCceEEEEEEcHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999999999974 6789999999999999999999999999999999999999999
Q ss_pred ccCCcc
Q 015093 403 EELPAN 408 (413)
Q Consensus 403 ~~~~~~ 408 (413)
+++|++
T Consensus 162 ~el~~~ 167 (168)
T d2rb4a1 162 KQLNAE 167 (168)
T ss_dssp EEECSS
T ss_pred CcCCCC
Confidence 998864
No 15
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=4.7e-29 Score=199.46 Aligned_cols=156 Identities=35% Similarity=0.656 Sum_probs=144.1
Q ss_pred ceEEEEEeCccccHHHHHHHHHHhcCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeE
Q 015093 253 IKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRV 332 (413)
Q Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~v 332 (413)
+.+++..+.. ..+.+.|.++++....+++||||++++.++.+++.|.+.++.+..+||+++..+|.++++.|++|+.++
T Consensus 2 l~q~~v~~~~-~~K~~~L~~ll~~~~~~k~iIF~~~~~~~~~l~~~L~~~~~~~~~ihg~~~~~~r~~~l~~F~~g~~~i 80 (168)
T d1t5ia_ 2 LQQYYVKLKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRI 80 (168)
T ss_dssp CEEEEEECCG-GGHHHHHHHHHHHSCCSSEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTSCSE
T ss_pred cEEEEEEeCh-HHHHHHHHHHHHhCCCCeEEEEEeeeecchhhhhhhccccccccccccccchhhhhhhhhhhcccccee
Confidence 5677777765 789999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCccccCCCCCCCCEEEEcCCCCChhHHHhhhcccCCCCCcceEEEEeccc-cHHHHHHHHHHhccccccCCcch
Q 015093 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD-DDRMLADIQRFYNVVIEELPANV 409 (413)
Q Consensus 333 li~t~~~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 409 (413)
||||+++++|+|+|.+++||++++|.++..|+||+||+||.|+.|.|++++++. +...+..+.+.+...++++|+++
T Consensus 81 Lv~T~~~~~Gid~~~~~~vi~~~~p~~~~~yiqr~GR~gR~g~~g~~i~l~~~~~~~~~~~~i~~~~~~~~~elp~~~ 158 (168)
T d1t5ia_ 81 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 158 (168)
T ss_dssp EEESSCCSTTCCGGGCSEEEESSCCSSHHHHHHHHHHHTGGGCCCEEEEEECSHHHHHHHHHHHHHHCCCEEECC---
T ss_pred eeccccccchhhcccchhhhhhhcccchhhHhhhhhhcccCCCccEEEEEECchHHHHHHHHHHHHHcCCcccCCchh
Confidence 999999999999999999999999999999999999999999999999999875 55678889999999999999775
No 16
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.96 E-value=1.5e-28 Score=194.45 Aligned_cols=153 Identities=37% Similarity=0.672 Sum_probs=143.0
Q ss_pred CCceEEEEEeCccccHHHHHHHHHHhcCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCC
Q 015093 251 EGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSS 330 (413)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~ 330 (413)
.++.+.+..++. ..+...|..+++.. +.++||||++++.++.+++.|++.|+.+..+|++++..+|..+++.|++|+.
T Consensus 2 ~nI~~~~i~v~~-~~K~~~L~~ll~~~-~~k~IIF~~s~~~~~~l~~~L~~~g~~~~~~~~~~~~~~r~~~~~~f~~~~~ 79 (155)
T d1hv8a2 2 ANIEQSYVEVNE-NERFEALCRLLKNK-EFYGLVFCKTKRDTKELASMLRDIGFKAGAIHGDLSQSQREKVIRLFKQKKI 79 (155)
T ss_dssp SSSEEEEEECCG-GGHHHHHHHHHCST-TCCEEEECSSHHHHHHHHHHHHHTTCCEEEECSSSCHHHHHHHHHHHHTTSS
T ss_pred CCeEEEEEEeCh-HHHHHHHHHHHccC-CCCEEEEECchHHHHHHHhhhcccccccccccccchhhhhhhhhhhhhcccc
Confidence 357778887766 68999999998764 4689999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCccccCCCCCCCCEEEEcCCCCChhHHHhhhcccCCCCCcceEEEEeccccHHHHHHHHHHhccccccC
Q 015093 331 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEEL 405 (413)
Q Consensus 331 ~vli~t~~~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (413)
++||||+++++|+|+|.+++||++++|+|+..|+||+||+||.|+.|.+++++++.|...+..+.+.++..++++
T Consensus 80 ~ilv~T~~~~~Gid~~~v~~Vi~~d~p~~~~~y~qr~GR~gR~g~~g~~i~~~~~~d~~~~~~i~~~~~~~i~~l 154 (155)
T d1hv8a2 80 RILIATDVMSRGIDVNDLNCVINYHLPQNPESYMHRIGRTGRAGKKGKAISIINRREYKKLRYIERAMKLKIKKL 154 (155)
T ss_dssp SEEEECTTHHHHCCCSCCSEEEESSCCSCHHHHHHHSTTTCCSSSCCEEEEEECTTSHHHHHHHHHHHTCCCCCB
T ss_pred eeeeehhHHhhhhhhccCcEEEEecCCCCHHHHHHHHHhcCcCCCCceEEEEEchHHHHHHHHHHHHHCCCcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999998887765
No 17
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=99.95 E-value=1.3e-26 Score=189.69 Aligned_cols=131 Identities=24% Similarity=0.400 Sum_probs=124.2
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCccccCC
Q 015093 264 EWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGI 343 (413)
Q Consensus 264 ~~~~~~l~~~~~~~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~ 343 (413)
..+++.|..+++.....++||||++++.++.+++.|...++.+..+||+++..+|.++++.|++|+.+|||||+++++|+
T Consensus 15 ~~k~~~L~~~l~~~~~~~~IIF~~t~~~~~~l~~~l~~~~~~~~~~h~~~~~~~r~~~~~~f~~g~~~ilvaTd~~~~Gi 94 (200)
T d1oywa3 15 FKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGI 94 (200)
T ss_dssp SSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEECTTSCTTT
T ss_pred CcHHHHHHHHHHhcCCCCEEEEEeeehhhHHhhhhhccCCceeEEecCCCcHHHHHHHHHHHhcccceEEEecchhhhcc
Confidence 45788999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEcCCCCChhHHHhhhcccCCCCCcceEEEEeccccHHHHHHH
Q 015093 344 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADI 394 (413)
Q Consensus 344 d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~~~~~~~~ 394 (413)
|+|++++||++++|.|+..|+|++||+||.|++|.+++|+.+.+...+..+
T Consensus 95 D~p~v~~VI~~~~P~~~~~y~qr~GR~gR~g~~g~ai~~~~~~d~~~l~~~ 145 (200)
T d1oywa3 95 NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRC 145 (200)
T ss_dssp CCTTCCEEEESSCCSSHHHHHHHHTTSCTTSSCEEEEEEECHHHHHHHHHH
T ss_pred CCCCCCEEEECCCccchHHHHHHhhhhhcCCCCceEEEecCHHHHHHHHhh
Confidence 999999999999999999999999999999999999999998877666543
No 18
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.94 E-value=3e-27 Score=196.52 Aligned_cols=182 Identities=16% Similarity=0.222 Sum_probs=139.1
Q ss_pred CCHHHHHHHHhCCCCCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHH
Q 015093 47 LKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEK 126 (413)
Q Consensus 47 l~~~~~~~l~~~~~~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~ 126 (413)
+++.+...|++.|+.+|+|+|.++++.+.+|+++++++|||+|||.+++++++..+.+. +++++++|+++|+.|+.+
T Consensus 10 ~~~~~~~~l~~~g~~~l~~~Q~~ai~~l~~~~~~il~apTGsGKT~~a~l~i~~~~~~~---~~vl~l~P~~~L~~q~~~ 86 (202)
T d2p6ra3 10 ISSYAVGILKEEGIEELFPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREAIKG---GKSLYVVPLRALAGEKYE 86 (202)
T ss_dssp HHHHHHHHHHCC---CCCCCCHHHHHHHTTCSCEEEECSSHHHHHHHHHHHHHHHHHTT---CCEEEEESSHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCCchhHHHHHHHHHHhhcc---CcceeecccHHHHHHHHH
Confidence 57788899999999999999999999999999999999999999999988887766443 489999999999999999
Q ss_pred HHHHhhcccCceEEEEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccCcHHHHH--
Q 015093 127 VMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIY-- 204 (413)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~~~~~~~-- 204 (413)
.++++... ...+....++...... ....++++++|+..+...+......+..+++||+||+|.+.+..+.....
T Consensus 87 ~~~~~~~~-~~~v~~~~~~~~~~~~---~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ii~DE~h~~~~~~r~~~~~~~ 162 (202)
T d2p6ra3 87 SFKKWEKI-GLRIGISTGDYESRDE---HLGDCDIIVTTSEKADSLIRNRASWIKAVSCLVVDEIHLLDSEKRGATLEIL 162 (202)
T ss_dssp HHTTTTTT-TCCEEEECSSCBCCSS---CSTTCSEEEEEHHHHHHHHHTTCSGGGGCCEEEETTGGGGGCTTTHHHHHHH
T ss_pred HHHHHhhc-cccceeeccCcccccc---cccccceeeeccHHHHHHHhccchhhhhhhhccccHHHHhcccccchHHHHH
Confidence 99887653 3455555555432221 12457899999999999888877777788999999999987665443333
Q ss_pred -HHHhhCCCCceEEEEeeeCChhHHHHHHHhcCC
Q 015093 205 -DIFQHLPGKIQVGVFSATMPPEALEITRKFMNK 237 (413)
Q Consensus 205 -~~~~~~~~~~~~i~lSAT~~~~~~~~~~~~~~~ 237 (413)
..++..+++.++++||||+++ ..++. .+++.
T Consensus 163 l~~i~~~~~~~~~l~lSATl~n-~~~~~-~~l~~ 194 (202)
T d2p6ra3 163 VTKMRRMNKALRVIGLSATAPN-VTEIA-EWLDA 194 (202)
T ss_dssp HHHHHHHCTTCEEEEEECCCTT-HHHHH-HHTTC
T ss_pred HHHHHhcCCCCcEEEEcCCCCc-HHHHH-HHcCC
Confidence 334445667899999999864 44554 44443
No 19
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.93 E-value=2e-25 Score=185.54 Aligned_cols=165 Identities=21% Similarity=0.160 Sum_probs=131.9
Q ss_pred CCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEE
Q 015093 62 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHA 141 (413)
Q Consensus 62 ~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~ 141 (413)
+||+||.++++.+. ++++++++|||+|||+++++++...+... +.+++|++|+++|++|+.+++.++....+..+..
T Consensus 9 ~pr~~Q~~~~~~~~-~~n~lv~~pTGsGKT~i~~~~~~~~~~~~--~~~il~i~P~~~L~~q~~~~~~~~~~~~~~~v~~ 85 (200)
T d1wp9a1 9 QPRIYQEVIYAKCK-ETNCLIVLPTGLGKTLIAMMIAEYRLTKY--GGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVA 85 (200)
T ss_dssp CCCHHHHHHHHHGG-GSCEEEECCTTSCHHHHHHHHHHHHHHHS--CSCEEEECSSHHHHHHHHHHHHHHBCSCGGGEEE
T ss_pred CCCHHHHHHHHHHh-cCCeEEEeCCCCcHHHHHHHHHHHHHHhc--CCcEEEEcCchHHHHHHHHHHHHhhcccccceee
Confidence 79999999998875 55799999999999999887776655432 3489999999999999999999998877888888
Q ss_pred EECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccCcHHHHHHHHhhCCCCceEEEEee
Q 015093 142 CVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSA 221 (413)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~lSA 221 (413)
..++........... ..+++++|++.+...+........+++++|+||||.+.+......+...+......++++++||
T Consensus 86 ~~~~~~~~~~~~~~~-~~~i~i~t~~~~~~~~~~~~~~~~~~~~vIiDE~H~~~~~~~~~~~~~~~~~~~~~~~~l~~SA 164 (200)
T d1wp9a1 86 LTGEKSPEERSKAWA-RAKVIVATPQTIENDLLAGRISLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQAKNPLVIGLTA 164 (200)
T ss_dssp ECSCSCHHHHHHHHH-HCSEEEECHHHHHHHHHTTSCCTTSCSEEEEETGGGCSTTCHHHHHHHHHHHHCSSCCEEEEES
T ss_pred eecccchhHHHHhhh-cccccccccchhHHHHhhhhhhccccceEEEEehhhhhcchhHHHHHHHHHhcCCCCcEEEEEe
Confidence 877776655544443 3589999999999998888888888999999999998765544444444444455788999999
Q ss_pred eCChhHHHH
Q 015093 222 TMPPEALEI 230 (413)
Q Consensus 222 T~~~~~~~~ 230 (413)
||.......
T Consensus 165 Tp~~~~~~~ 173 (200)
T d1wp9a1 165 SPGSTPEKI 173 (200)
T ss_dssp CSCSSHHHH
T ss_pred cCCCcHHHH
Confidence 997554443
No 20
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=99.93 E-value=3.2e-27 Score=197.18 Aligned_cols=188 Identities=16% Similarity=0.174 Sum_probs=138.8
Q ss_pred CccCCCCCHHHHHHHHhC-CCCCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHH
Q 015093 41 SFDSMGLKENLLRGIYAY-GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRE 119 (413)
Q Consensus 41 ~~~~~~l~~~~~~~l~~~-~~~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~ 119 (413)
..+.++|++...+.|++. |+..+||+|.++++++..|+++++++|||||||+++.++++.. ..++++++|+++
T Consensus 3 ~~e~~~l~~~~~~~l~~~fg~~~~rp~Q~~ai~~~l~g~~vlv~apTGsGKT~~~~~~~~~~------~~~~~~v~P~~~ 76 (206)
T d1oywa2 3 QAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLL------NGLTVVVSPLIS 76 (206)
T ss_dssp CCCCSSHHHHHHHHHHHTTCCSSCCTTHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHS------SSEEEEECSCHH
T ss_pred chhhCCCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCCCCcchhhhhhhhc------cCceEEeccchh
Confidence 456788999999999886 9999999999999999999999999999999999998888753 348999999999
Q ss_pred HHHHHHHHHHHhhcccCceEEEEECCc----chHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhh
Q 015093 120 LAQQIEKVMRALGDYMGVKVHACVGGT----SVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEML 195 (413)
Q Consensus 120 l~~q~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~ 195 (413)
|++|+.+.++.+... ........ .............+|+++|+..+.............++++|+||||.+.
T Consensus 77 L~~q~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~t~~~~~~~~~~~~~~~~~v~~lviDEaH~~~ 152 (206)
T d1oywa2 77 LMKDQVDQLQANGVA----AACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCIS 152 (206)
T ss_dssp HHHHHHHHHHHTTCC----EEEECTTSCHHHHHHHHHHHHHTCCSEEEECHHHHTSTTHHHHHTTSCEEEEEESSGGGGC
T ss_pred hhhhHHHHHHhhccc----ccccccccccccchhHHHHHhcCCceEEEEechhhhchhhcccchhheeeeeeeeeeeeee
Confidence 999999999887532 22222222 2222233345568899999988854433333345568999999999886
Q ss_pred ccCcH-----HHHHHHHhhCCCCceEEEEeeeCChhHHH-HHHHh-cCCCE
Q 015093 196 SRGFK-----DQIYDIFQHLPGKIQVGVFSATMPPEALE-ITRKF-MNKPV 239 (413)
Q Consensus 196 ~~~~~-----~~~~~~~~~~~~~~~~i~lSAT~~~~~~~-~~~~~-~~~~~ 239 (413)
+++.. ..+..+...++ +.|++++|||+++...+ +.+.+ +.+|.
T Consensus 153 ~~~~~~~~~~~~~~~l~~~~~-~~~ii~lSATl~~~v~~di~~~L~l~~p~ 202 (206)
T d1oywa2 153 QWGHDFRPEYAALGQLRQRFP-TLPFMALTATADDTTRQDIVRLLGLNDPL 202 (206)
T ss_dssp TTSSCCCHHHHGGGGHHHHCT-TSCEEEEESCCCHHHHHHHHHHHTCCSCE
T ss_pred ccccchHHHHHHHHHHHHhCC-CCceEEEEeCCCHHHHHHHHHHcCCCCCc
Confidence 55421 22334445554 68999999999887654 45543 56663
No 21
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=99.92 E-value=1.7e-24 Score=170.15 Aligned_cols=128 Identities=24% Similarity=0.344 Sum_probs=109.8
Q ss_pred HHHHHHHHHH-h-cCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCccccCC
Q 015093 266 KLDTLCDLYE-T-LAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGI 343 (413)
Q Consensus 266 ~~~~l~~~~~-~-~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~ 343 (413)
..+.+...+. . ..++++||||++++.|+.+++.|.+.|+.+..+||+++..+|.++++.|++|+++|||+|+++++|+
T Consensus 16 qv~dll~~i~~~~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~eR~~~l~~F~~G~~~vLVaT~v~~~Gi 95 (174)
T d1c4oa2 16 QILDLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLGHYDCLVGINLLREGL 95 (174)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHHHHHHHHHHHTTSCSEEEESCCCCTTC
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHHHHHHHHHHHCCCeEEEEeeeeeeeec
Confidence 4444444443 3 3567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEcCCCC-----ChhHHHhhhcccCCCCCcceEEEEeccccHHHHHHH
Q 015093 344 DVQQVSLVINYDLPT-----QPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADI 394 (413)
Q Consensus 344 d~~~~~~vi~~~~~~-----s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~~~~~~~~ 394 (413)
|+|++++||++++|. |...|.|++||+||.|+ |.+++++......+.+.+
T Consensus 96 Dip~V~~Vi~~~~~~~~~~~~~~~~iq~~GR~gR~~~-g~~~~~~~~~~~~~~~~i 150 (174)
T d1c4oa2 96 DIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAR-GEVWLYADRVSEAMQRAI 150 (174)
T ss_dssp CCTTEEEEEETTTTSCSGGGSHHHHHHHHGGGTTSTT-CEEEEECSSCCHHHHHHH
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHhhhhhhcCC-CeeEEeecCCCHHHHHHH
Confidence 999999999999775 44779999999999764 888888877665544433
No 22
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.92 E-value=1.9e-24 Score=184.18 Aligned_cols=178 Identities=17% Similarity=0.179 Sum_probs=127.2
Q ss_pred HHHHHHHHhCCCCCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHH
Q 015093 49 ENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVM 128 (413)
Q Consensus 49 ~~~~~~l~~~~~~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~ 128 (413)
+.+.+ +.+.++.+|+++|..+++.+++|+++++++|||+|||++++++++....+ +.+++|++|+++|++|+.+++
T Consensus 31 ~~~~~-~~~~~~~~p~~~Q~~~i~~~l~g~~~~i~apTGsGKT~~~~~~~~~~~~~---~~rvliv~Pt~~La~Q~~~~l 106 (237)
T d1gkub1 31 KEFVE-FFRKCVGEPRAIQKMWAKRILRKESFAATAPTGVGKTSFGLAMSLFLALK---GKRCYVIFPTSLLVIQAAETI 106 (237)
T ss_dssp HHHHH-HHHTTTCSCCHHHHHHHHHHHTTCCEECCCCBTSCSHHHHHHHHHHHHTT---SCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHH-HHHhccCCCCHHHHHHHHHHHCCCCEEEEecCCChHHHHHHHHHHHHHHh---cCeEEEEeccHHHHHHHHHHH
Confidence 34444 44557789999999999999999999999999999999998888766544 348999999999999999999
Q ss_pred HHhhcccCce----EEEEECCcchHHHHHHH--hcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccCcHHH
Q 015093 129 RALGDYMGVK----VHACVGGTSVREDQRIL--SAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQ 202 (413)
Q Consensus 129 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~~~~~ 202 (413)
+++....++. .....++.......... ...++|+|+||+.|.+.. ....++++||+||+|.+.+... .
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ilv~Tp~~l~~~~----~~~~~~~~vVvDE~d~~l~~~~--~ 180 (237)
T d1gkub1 107 RKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLRNFKIVITTTQFLSKHY----RELGHFDFIFVDDVDAILKASK--N 180 (237)
T ss_dssp HHHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSGGGCSEEEEEHHHHHHCS----TTSCCCSEEEESCHHHHHTSTH--H
T ss_pred HHHHHHcCCceEEEEeeeecccchhhhhhhhccccccceeccChHHHHHhh----hhcCCCCEEEEEChhhhhhccc--c
Confidence 9988766543 34444444444333333 235789999999876533 2355689999999999875442 2
Q ss_pred HHHHHhh-------------CCCCceEEEEeeeCChhHHH-HHHHhcC
Q 015093 203 IYDIFQH-------------LPGKIQVGVFSATMPPEALE-ITRKFMN 236 (413)
Q Consensus 203 ~~~~~~~-------------~~~~~~~i~lSAT~~~~~~~-~~~~~~~ 236 (413)
+...+.. .+...+++++|||+++.... ..+.+++
T Consensus 181 ~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~SAT~~~~~~~~l~r~ll~ 228 (237)
T d1gkub1 181 VDKLLHLLGFHYDLKTKSWVGEARGCLMVSTATAKKGKKAELFRQLLN 228 (237)
T ss_dssp HHHHHHHTTEEEETTTTEEEECCSSEEEECCCCSCCCTTHHHHHHHHC
T ss_pred hhHHHHhcCChHHHHHHHhhCCCCCeEEEEeCCCCcccHHHHHHHHhC
Confidence 2222222 13456799999998754433 3344443
No 23
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=99.90 E-value=2.7e-23 Score=166.31 Aligned_cols=122 Identities=25% Similarity=0.361 Sum_probs=104.4
Q ss_pred cHHHHHHHHHHhc--CCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCccccC
Q 015093 265 WKLDTLCDLYETL--AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARG 342 (413)
Q Consensus 265 ~~~~~l~~~~~~~--~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G 342 (413)
...+.+...+.+. .+.+++|||++++.++.++..|++.|+.+..+||++++.+|.++++.|++|+.+|||||+++++|
T Consensus 15 ~qvd~ll~~i~~~~~~~~~~iif~~~~~~~~~~~~~l~~~g~~~~~~hg~~~~~eR~~~l~~Fr~g~~~vLVaTdv~~rG 94 (181)
T d1t5la2 15 GQIDDLIGEIRERVERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVGINLLREG 94 (181)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHHTSCSEEEESCCCSSS
T ss_pred CcHHHHHHHHHHHHhcCCeEEEEeehhhhhHHHHHHHHhCCcceeEecCCccHHHHHHHHHHHHCCCCCEEEehhHHHcc
Confidence 3444444444332 45789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCEEEEcCCCC-----ChhHHHhhhcccCCCCCcceEEEEecccc
Q 015093 343 IDVQQVSLVINYDLPT-----QPENYLHRIGRSGRFGRKGVAINFVTRDD 387 (413)
Q Consensus 343 ~d~~~~~~vi~~~~~~-----s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~ 387 (413)
+|+|++++||+++.|. |...|+||+||+||.|. |.+++++....
T Consensus 95 iDip~v~~VI~~d~p~~~~~~s~~~yi~R~GRagR~g~-~~~~~~~~~~~ 143 (181)
T d1t5la2 95 LDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAN-GHVIMYADTIT 143 (181)
T ss_dssp CCCTTEEEEEETTTTSCSGGGSHHHHHHHHGGGTTSTT-CEEEEECSSCC
T ss_pred CCCCCCCEEEEecCCcccccccHHHHHHHHHhhccccC-ceeEeecchhh
Confidence 9999999999999985 67899999999999875 55555554443
No 24
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=99.85 E-value=7.5e-22 Score=170.90 Aligned_cols=153 Identities=17% Similarity=0.121 Sum_probs=113.9
Q ss_pred CCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEE
Q 015093 62 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHA 141 (413)
Q Consensus 62 ~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~ 141 (413)
+||+||.+++..+++++..++.+|||+|||+++...+.... ... ..++||+||+++|+.||.+++.+++......+..
T Consensus 113 ~~rdyQ~~av~~~l~~~~~il~~pTGsGKT~i~~~i~~~~~-~~~-~~k~Liivp~~~Lv~Q~~~~f~~~~~~~~~~~~~ 190 (282)
T d1rifa_ 113 EPHWYQKDAVFEGLVNRRRILNLPTSAGRSLIQALLARYYL-ENY-EGKILIIVPTTALTTQMADDFVDYRLFSHAMIKK 190 (282)
T ss_dssp CCCHHHHHHHHHHHHHSEEEECCCTTSCHHHHHHHHHHHHH-HHC-SSEEEEECSSHHHHHHHHHHHHHHTSCCGGGEEE
T ss_pred ccchHHHHHHHHHHhcCCceeEEEcccCccHHHHHHHHHhh-hcc-cceEEEEEcCchhHHHHHHHHHHhhcccccccee
Confidence 79999999999999999999999999999998765443332 222 3489999999999999999999987655555656
Q ss_pred EECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccCcHHHHHHHHhhCCCCceEEEEee
Q 015093 142 CVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSA 221 (413)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~lSA 221 (413)
..++...... .....+++++|++++..... ..++.+++||+||||++. ...+..++..+.+....++|||
T Consensus 191 ~~~g~~~~~~---~~~~~~i~i~t~qs~~~~~~---~~~~~f~~VIvDEaH~~~----a~~~~~il~~~~~~~~rlGlTa 260 (282)
T d1rifa_ 191 IGGGASKDDK---YKNDAPVVVGTWQTVVKQPK---EWFSQFGMMMNDECHLAT----GKSISSIISGLNNCMFKFGLSG 260 (282)
T ss_dssp CSTTCSSTTC---CCTTCSEEEECHHHHTTSCG---GGGGGEEEEEEETGGGCC----HHHHHHHTTTCTTCCEEEEECS
T ss_pred ecceeccccc---ccccceEEEEeeehhhhhcc---cccCCCCEEEEECCCCCC----chhHHHHHHhccCCCeEEEEEe
Confidence 6555442221 12346899999988754322 234568999999999874 3456677777765556799999
Q ss_pred eCChh
Q 015093 222 TMPPE 226 (413)
Q Consensus 222 T~~~~ 226 (413)
||...
T Consensus 261 T~~~~ 265 (282)
T d1rifa_ 261 SLRDG 265 (282)
T ss_dssp SCCTT
T ss_pred ecCCC
Confidence 98654
No 25
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.85 E-value=3.5e-21 Score=159.46 Aligned_cols=136 Identities=17% Similarity=0.170 Sum_probs=103.2
Q ss_pred CCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEE
Q 015093 62 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHA 141 (413)
Q Consensus 62 ~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~ 141 (413)
+|++||.++++.+.++++.++.+|||+|||++++..+... +.++||+||+++|++||.++++.+... .+..
T Consensus 70 ~Lr~yQ~eav~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~------~~~~Liv~p~~~L~~q~~~~~~~~~~~---~~~~ 140 (206)
T d2fz4a1 70 SLRDYQEKALERWLVDKRGCIVLPTGSGKTHVAMAAINEL------STPTLIVVPTLALAEQWKERLGIFGEE---YVGE 140 (206)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEESSSTTHHHHHHHHHHHS------CSCEEEEESSHHHHHHHHHHHGGGCGG---GEEE
T ss_pred CcCHHHHHHHHHHHhCCCcEEEeCCCCCceehHHhHHHHh------cCceeEEEcccchHHHHHHHHHhhccc---chhh
Confidence 7999999999999999999999999999999876554332 347999999999999999999887543 3444
Q ss_pred EECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccCcHHHHHHHHhhCCCCceEEEEee
Q 015093 142 CVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSA 221 (413)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~lSA 221 (413)
..|+.. ...+++++|++++....... ...+++||+||||++.+..+ ..++..++ ...+++|||
T Consensus 141 ~~~~~~---------~~~~i~i~t~~~~~~~~~~~---~~~~~lvIiDEaH~~~a~~~----~~i~~~~~-~~~~lgLTA 203 (206)
T d2fz4a1 141 FSGRIK---------ELKPLTVSTYDSAYVNAEKL---GNRFMLLIFDEVHHLPAESY----VQIAQMSI-APFRLGLTA 203 (206)
T ss_dssp ESSSCB---------CCCSEEEEEHHHHHHTHHHH---TTTCSEEEEECSSCCCTTTH----HHHHHTCC-CSEEEEEEE
T ss_pred cccccc---------cccccccceehhhhhhhHhh---CCcCCEEEEECCeeCCcHHH----HHHHhccC-CCcEEEEec
Confidence 444332 34579999999987655432 23478999999999865443 34555554 456789999
Q ss_pred eC
Q 015093 222 TM 223 (413)
Q Consensus 222 T~ 223 (413)
|+
T Consensus 204 Tl 205 (206)
T d2fz4a1 204 TF 205 (206)
T ss_dssp SC
T ss_pred CC
Confidence 97
No 26
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.85 E-value=7e-22 Score=150.61 Aligned_cols=104 Identities=24% Similarity=0.411 Sum_probs=92.5
Q ss_pred HHhcCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCccccCCCCCCCCEEEE
Q 015093 274 YETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN 353 (413)
Q Consensus 274 ~~~~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~d~~~~~~vi~ 353 (413)
++....+++||||++++.|+.+++.|++.|+.+..+|++++. +.|++|+.++||||+++++|+| |+++.||+
T Consensus 30 l~~~~~~k~IVFc~t~~~ae~la~~L~~~G~~~~~~H~~~~~-------~~~~~~~~~vlvaTd~~~~GiD-~~v~~Vi~ 101 (138)
T d1jr6a_ 30 LEVIKGGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDV-------SVIPTNGDVVVVATDALMTGFT-GDFDSVID 101 (138)
T ss_dssp HHHHTTSCEEEECSCHHHHHHHHHHHHHHTCEEEEECTTCCS-------CCCTTSSCEEEEESSSSCSSSC-CCBSEEEE
T ss_pred HhhcCCCCEEEEeCcHHHHHHHHHHHhccccchhhhhccchh-------hhhhhhhcceeehhHHHHhccc-cccceEEE
Confidence 345567899999999999999999999999999999999984 4578899999999999999999 99999998
Q ss_pred cC----CCCChhHHHhhhcccCCCCCcceEEEEecccc
Q 015093 354 YD----LPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 387 (413)
Q Consensus 354 ~~----~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~ 387 (413)
++ +|.+...|+||+||+|| |++|. ++|+.+.+
T Consensus 102 ~~~~~~~P~~~~~y~qr~GR~gR-g~~G~-~~~i~~~e 137 (138)
T d1jr6a_ 102 CNTSDGKPQDAVSRTQRRGRTGR-GKPGI-YRFVAPGE 137 (138)
T ss_dssp CSEETTEECCHHHHHHHHTTBCS-SSCEE-EEECCSSC
T ss_pred EEecCCCCCCHHHHHhHhccccC-CCCcE-EEEEcCCC
Confidence 54 68999999999999999 89995 66777654
No 27
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.84 E-value=8.3e-20 Score=150.94 Aligned_cols=173 Identities=17% Similarity=0.178 Sum_probs=131.4
Q ss_pred CCCHHHHHHHHhCCCCCCcHHHHhhhhhhhC----C--CcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHH
Q 015093 46 GLKENLLRGIYAYGFEKPSAIQQRGIVPFCK----G--LDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRE 119 (413)
Q Consensus 46 ~l~~~~~~~l~~~~~~~~~~~Q~~~~~~~~~----~--~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~ 119 (413)
..+....+.+.+.-...+++-|..+++.+.+ + .+.+++|.||||||.+|+.++...+..+ .++++++|+..
T Consensus 39 ~~~~~~~~~~~~~lP~~lt~~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~~~g---~qv~~l~Pt~~ 115 (233)
T d2eyqa3 39 KHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNH---KQVAVLVPTTL 115 (233)
T ss_dssp CCCHHHHHHHHHTCCSCCCHHHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHHTTT---CEEEEECSSHH
T ss_pred CCCHHHHHhhhhccccccchhHHHHHHHHHHHHhccCccCeEEEcCCCCCcHHHHHHHHHHHHHcC---CceEEEccHHH
Confidence 4455555555444334899999999988754 3 3589999999999999999998887654 49999999999
Q ss_pred HHHHHHHHHHHhhcccCceEEEEECCcchHHHH----HHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhh
Q 015093 120 LAQQIEKVMRALGDYMGVKVHACVGGTSVREDQ----RILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEML 195 (413)
Q Consensus 120 l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~ 195 (413)
|+.|+++.++++....+..+..+++........ ....+..+|+|+|...+. ....+.++++||+||-|++.
T Consensus 116 La~Q~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~~~iviGths~l~-----~~~~f~~LgLiIiDEeH~fg 190 (233)
T d2eyqa3 116 LAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQ-----SDVKFKDLGLLIVDEEHRFG 190 (233)
T ss_dssp HHHHHHHHHHHHSTTTTCCEEEESTTSCHHHHHHHHHHHHTTCCSEEEECTHHHH-----SCCCCSSEEEEEEESGGGSC
T ss_pred hHHHHHHHHHHHHhhCCCEEEeccCcccchhHHHHHHHHhCCCCCEEEeehhhhc-----cCCccccccceeeechhhhh
Confidence 999999999999888899999999987755443 334567899999966554 44566789999999999864
Q ss_pred ccCcHHHHHHHHhhCCCCceEEEEeeeCChhHHHHH
Q 015093 196 SRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEIT 231 (413)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~~ 231 (413)
... - +.++....++.++.+||||.+......
T Consensus 191 ~kQ----~-~~l~~~~~~~~~l~~SATPiprtl~~~ 221 (233)
T d2eyqa3 191 VRH----K-ERIKAMRANVDILTLTATPIPRTLNMA 221 (233)
T ss_dssp HHH----H-HHHHHHHTTSEEEEEESSCCCHHHHHH
T ss_pred hHH----H-HHHHhhCCCCCEEEEecchhHHHHHHH
Confidence 322 1 222333446889999999998765443
No 28
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.83 E-value=3.9e-20 Score=155.92 Aligned_cols=170 Identities=20% Similarity=0.227 Sum_probs=129.8
Q ss_pred CHHHHHHHHhCCCCCCcHHHHhhhhhhhC----C--CcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHH
Q 015093 48 KENLLRGIYAYGFEKPSAIQQRGIVPFCK----G--LDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELA 121 (413)
Q Consensus 48 ~~~~~~~l~~~~~~~~~~~Q~~~~~~~~~----~--~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~ 121 (413)
.+.....++...| +|++-|.++++.+.+ + .+.+++|.||||||.+|+.+++..+..+. ++++++||..|+
T Consensus 70 ~~l~~~f~~~LPF-eLT~~Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~~~g~---q~~~m~Pt~~La 145 (264)
T d1gm5a3 70 GKLAEEFIKSLPF-KLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGF---QTAFMVPTSILA 145 (264)
T ss_dssp THHHHHHHHHSSS-CCCHHHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHHHHTS---CEEEECSCHHHH
T ss_pred hHHHHHHHhhccc-cCCchHHHHHHHHHHHhhccCcceeeeeccccccccHHHHHHHHHHHhccc---ceeEEeehHhhh
Confidence 3445556666777 799999999998854 2 35899999999999999999988876654 899999999999
Q ss_pred HHHHHHHHHhhcccCceEEEEECCcchHHHHHH----HhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhcc
Q 015093 122 QQIEKVMRALGDYMGVKVHACVGGTSVREDQRI----LSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR 197 (413)
Q Consensus 122 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~ 197 (413)
.|+++.++++....+..+..++|+......... ..++.+|+|+|..-+. ....+.++++||+||-|++...
T Consensus 146 ~Qh~~~~~~~f~~~~~~v~~l~~~~~~~~r~~~~~~~~~g~~~iiIGThsl~~-----~~~~f~~LglviiDEqH~fgv~ 220 (264)
T d1gm5a3 146 IQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQ-----EDVHFKNLGLVIIDEQHRFGVK 220 (264)
T ss_dssp HHHHHHHHHHHTCSSCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHH-----HCCCCSCCCEEEEESCCCC---
T ss_pred HHHHHHHHHhhhhccccceeeccccchHHHHHHHHHHHCCCCCEEEeehHHhc-----CCCCccccceeeeccccccchh
Confidence 999999999999889999999998876554333 3457899999976554 2344567899999999997543
Q ss_pred CcHHHHHHHHhhCCCCceEEEEeeeCChhHHHHH
Q 015093 198 GFKDQIYDIFQHLPGKIQVGVFSATMPPEALEIT 231 (413)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~~ 231 (413)
... .+......+.++.+||||.+......
T Consensus 221 Qr~-----~l~~~~~~~~~l~~SATPiprtl~~~ 249 (264)
T d1gm5a3 221 QRE-----ALMNKGKMVDTLVMSATPIPRSMALA 249 (264)
T ss_dssp --C-----CCCSSSSCCCEEEEESSCCCHHHHHH
T ss_pred hHH-----HHHHhCcCCCEEEEECCCCHHHHHHH
Confidence 321 12222346789999999988765444
No 29
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.82 E-value=2.9e-20 Score=162.53 Aligned_cols=123 Identities=24% Similarity=0.429 Sum_probs=106.9
Q ss_pred HHHHHHHH----HHhcCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCC--------CCHHHHHHHHHHHhcCCCeEE
Q 015093 266 KLDTLCDL----YETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGD--------MDQNSRDIIMREFRSGSSRVL 333 (413)
Q Consensus 266 ~~~~l~~~----~~~~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~--------~~~~~r~~~~~~f~~~~~~vl 333 (413)
+...+.++ +....+.++||||++++.++.+++.|.+.++.+..++|. ++..+|.++++.|++|+++||
T Consensus 144 K~~~l~~~l~~~~~~~~~~k~iiF~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~~g~~~vL 223 (286)
T d1wp9a2 144 KMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASKENDRGLSQREQKLILDEFARGEFNVL 223 (286)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECCSSCC-------CCHHHHHHHHHHHTSCSEE
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEeCcHHhHHHHHHHHHHcCCceEEeeccccccccchhchHHHHHHHHHHHcCCCcEE
Confidence 44444444 445677899999999999999999999999998888774 555688999999999999999
Q ss_pred EEeCccccCCCCCCCCEEEEcCCCCChhHHHhhhcccCCCCCcceEEEEeccccHH
Q 015093 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDR 389 (413)
Q Consensus 334 i~t~~~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~~~ 389 (413)
|||+++++|+|+|++++||++++|+++..|+||+||+||. ++|.++.++++.+.+
T Consensus 224 v~T~~~~~Gld~~~~~~Vi~~d~~~~~~~~~Qr~GR~gR~-~~~~~~~l~~~~~~e 278 (286)
T d1wp9a2 224 VATSVGEEGLDVPEVDLVVFYEPVPSAIRSIQRRGRTGRH-MPGRVIILMAKGTRD 278 (286)
T ss_dssp EECGGGGGGGGSTTCCEEEESSCCHHHHHHHHHHTTSCSC-CCSEEEEEEETTSHH
T ss_pred EEccceeccccCCCCCEEEEeCCCCCHHHHHHHHHhCCCC-CCCEEEEEEeCCCHH
Confidence 9999999999999999999999999999999999999996 479999999987655
No 30
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.80 E-value=6e-20 Score=150.36 Aligned_cols=121 Identities=21% Similarity=0.374 Sum_probs=101.5
Q ss_pred HHHHHHHHHhcCCCcEEEEEcCcccHHHHHHHHhhC------------------------------CCeeEeecCCCCHH
Q 015093 267 LDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSR------------------------------DHTVSATHGDMDQN 316 (413)
Q Consensus 267 ~~~l~~~~~~~~~~~~lIf~~~~~~a~~l~~~l~~~------------------------------~~~~~~~~~~~~~~ 316 (413)
.+.+.+.+++ ++++||||+|++.|+.++..|.+. ...+.++|+++++.
T Consensus 30 ~~l~~~~i~~--~~~~LVF~~sRk~~~~~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~GIa~hh~~l~~~ 107 (201)
T d2p6ra4 30 EELVEECVAE--NGGVLVFESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLNG 107 (201)
T ss_dssp HHHHHHHHHT--TCCEEEECSSHHHHHHHHHHHHHHHHTTCCCSSHHHHHHTTCCSHHHHHHHHHHHTTCCEECTTSCHH
T ss_pred HHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhhhhhHHHHHHHhccHHHHHHHhhhh
Confidence 3444455553 578999999999999888887641 12378899999999
Q ss_pred HHHHHHHHHhcCCCeEEEEeCccccCCCCCCCCEEEE-------cCCCCChhHHHhhhcccCCCCC--cceEEEEecccc
Q 015093 317 SRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN-------YDLPTQPENYLHRIGRSGRFGR--KGVAINFVTRDD 387 (413)
Q Consensus 317 ~r~~~~~~f~~~~~~vli~t~~~~~G~d~~~~~~vi~-------~~~~~s~~~~~Q~~GR~~R~g~--~g~~~~~~~~~~ 387 (413)
+|..+++.|++|.++|||||+++++|+|+|..++||+ .+.|.+..+|+||+||+||.|. .|.+++++.+.+
T Consensus 108 ~r~~ie~~f~~g~i~vlvaT~~l~~Gin~p~~~vvi~~~~~~d~~~~~~~~~~~~q~~GRAGR~g~~~~G~~~l~~~~~~ 187 (201)
T d2p6ra4 108 QRRVVEDAFRRGNIKVVVATPTLAAGVNLPARRVIVRSLYRFDGYSKRIKVSEYKQMAGRAGRPGMDERGEAIIIVGKRD 187 (201)
T ss_dssp HHHHHHHHHHTTSCCEEEECSTTTSSSCCCBSEEEECCSEEESSSEEECCHHHHHHHHTTBSCTTTCSCEEEEEECCGGG
T ss_pred hHHHHHHHHhCCCceEEEechHHHhhcCCCCceEEEecceeccCCcCCCCHHHHHHHhcccCCCCCCCeeEEEEEeCCCC
Confidence 9999999999999999999999999999998888886 4567899999999999999884 688998887776
Q ss_pred HH
Q 015093 388 DR 389 (413)
Q Consensus 388 ~~ 389 (413)
..
T Consensus 188 ~~ 189 (201)
T d2p6ra4 188 RE 189 (201)
T ss_dssp HH
T ss_pred hH
Confidence 54
No 31
>d2fwra1 c.37.1.19 (A:257-456) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.79 E-value=4.7e-20 Score=152.12 Aligned_cols=117 Identities=21% Similarity=0.383 Sum_probs=103.9
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCccccCC
Q 015093 264 EWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGI 343 (413)
Q Consensus 264 ~~~~~~l~~~~~~~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~ 343 (413)
..++..+.++++...+.++||||++.+.++.+++.|. +..+||+++..+|+++++.|++|+.+|||+|+++++|+
T Consensus 78 ~~K~~~l~~ll~~~~~~k~lvf~~~~~~~~~l~~~l~-----~~~i~g~~~~~~R~~~l~~F~~~~~~vLv~~~~~~~Gi 152 (200)
T d2fwra1 78 KNKIRKLREILERHRKDKIIIFTRHNELVYRISKVFL-----IPAITHRTSREEREEILEGFRTGRFRAIVSSQVLDEGI 152 (200)
T ss_dssp SHHHHHHHHHHHHTSSSCBCCBCSCHHHHHHHHHHTT-----CCBCCSSSCSHHHHTHHHHHHHSSCSBCBCSSCCCSSS
T ss_pred HHHHHHHHHHHHhCCCCcEEEEeCcHHHHHHHHhhcC-----cceeeCCCCHHHHHHHHHHhhcCCeeeeeecchhhccc
Confidence 3578889999999888899999999999999998874 45589999999999999999999999999999999999
Q ss_pred CCCCCCEEEEcCCCCChhHHHhhhcccCCCCCcc---eEEEEecc
Q 015093 344 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKG---VAINFVTR 385 (413)
Q Consensus 344 d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~g---~~~~~~~~ 385 (413)
|+|.+++||++++|+|+..+.|++||++|.|+.+ ..+.|+..
T Consensus 153 dl~~~~~vi~~~~~~s~~~~~Q~iGR~~R~~~~k~~~~i~~~v~~ 197 (200)
T d2fwra1 153 DVPDANVGVIMSGSGSAREYIQRLGRILRPSKGKKEAVLYELISR 197 (200)
T ss_dssp CSCCBSEEEEECCSSCCHHHHHHHHHSBCCCTTTCCEEEEEEEEC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCCcEEEEEEEecC
Confidence 9999999999999999999999999999997643 34444443
No 32
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=99.77 E-value=2.5e-19 Score=139.22 Aligned_cols=136 Identities=21% Similarity=0.217 Sum_probs=90.2
Q ss_pred hhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHH
Q 015093 74 FCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQR 153 (413)
Q Consensus 74 ~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (413)
+.+|+++++.+|||+|||.+++..++...... +.++++++|++.+++|+.+.+... +..+........
T Consensus 4 l~~~~~~il~~~tGsGKT~~~~~~~~~~~~~~--~~~vli~~p~~~l~~q~~~~~~~~----~~~~~~~~~~~~------ 71 (140)
T d1yksa1 4 LKKGMTTVLDFHPGAGKTRRFLPQILAECARR--RLRTLVLAPTRVVLSEMKEAFHGL----DVKFHTQAFSAH------ 71 (140)
T ss_dssp TSTTCEEEECCCTTSSTTTTHHHHHHHHHHHT--TCCEEEEESSHHHHHHHHHHTTTS----CEEEESSCCCCC------
T ss_pred HHcCCcEEEEcCCCCChhHHHHHHHHHHhhhc--CceeeeeecchhHHHHHHHHhhhh----hhhhcccccccc------
Confidence 45688999999999999988876666554333 458999999999999988766443 222222211111
Q ss_pred HHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccCcH-HHHHHHHhhCCCCceEEEEeeeCC
Q 015093 154 ILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFK-DQIYDIFQHLPGKIQVGVFSATMP 224 (413)
Q Consensus 154 ~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~~~-~~~~~~~~~~~~~~~~i~lSAT~~ 224 (413)
......+.+.+...+...... ...+.++++||+||||++...... ..+...+... ++.++++||||||
T Consensus 72 -~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~lvIiDEaH~~~~~~~~~~~~~~~~~~~-~~~~~l~lTATPp 140 (140)
T d1yksa1 72 -GSGREVIDAMCHATLTYRMLE-PTRVVNWEVIIMDEAHFLDPASIAARGWAAHRARA-NESATILMTATPP 140 (140)
T ss_dssp -CCSSCCEEEEEHHHHHHHHTS-SSCCCCCSEEEETTTTCCSHHHHHHHHHHHHHHHT-TSCEEEEECSSCT
T ss_pred -cccccchhhhhHHHHHHHHhc-cccccceeEEEEccccccChhhHHHHHHHHHHhhC-CCCCEEEEEcCCC
Confidence 012356777888777665433 445677999999999986333221 2223333333 4789999999996
No 33
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.75 E-value=6e-19 Score=143.05 Aligned_cols=132 Identities=18% Similarity=0.315 Sum_probs=102.6
Q ss_pred HHHHHHHHHHhc--CCCcEEEEEcCcccHH--------HHHHHHhhC---CCeeEeecCCCCHHHHHHHHHHHhcCCCeE
Q 015093 266 KLDTLCDLYETL--AITQSVIFVNTRRKVD--------WLTDQMRSR---DHTVSATHGDMDQNSRDIIMREFRSGSSRV 332 (413)
Q Consensus 266 ~~~~l~~~~~~~--~~~~~lIf~~~~~~a~--------~l~~~l~~~---~~~~~~~~~~~~~~~r~~~~~~f~~~~~~v 332 (413)
+...+.+.++.. .++++-++||.++..+ ..++.|.+. ++.+..+||+|++.+|++++..|++|+.+|
T Consensus 14 ~~~~v~~~I~~el~~g~QvyvVcP~Ieese~~~~~~~~e~~~~l~~~~~p~~~v~~lHG~m~~~eke~~m~~F~~g~~~i 93 (206)
T d1gm5a4 14 RVNEVYEFVRQEVMRGGQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKLGLMHGRLSQEEKDRVMLEFAEGRYDI 93 (206)
T ss_dssp THHHHHHHHHHHTTTSCCBCCBCCCC--------CHHHHHHHSGGGSCC---CBCCCCSSSCCSCSHHHHHHHTTTSSSB
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEeeecccccccchhhHHHHHHHHHhcCCCCeEEEEeecccHHHHHHHHHHHHCCCEEE
Confidence 444455555443 5567888898775544 334444432 567889999999999999999999999999
Q ss_pred EEEeCccccCCCCCCCCEEEEcCCCC-ChhHHHhhhcccCCCCCcceEEEEeccccHHHHHHHHHH
Q 015093 333 LITTDLLARGIDVQQVSLVINYDLPT-QPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRF 397 (413)
Q Consensus 333 li~t~~~~~G~d~~~~~~vi~~~~~~-s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~~~~~~~~~~~ 397 (413)
||||.+++.|+|+|+++++|+.+.+. +.+++.|..||+||.|..|.|++++.+.+....+.+..+
T Consensus 94 LVaTtViE~GIDip~a~~iii~~a~~fglsqlhQlrGRvGR~~~~~~~~l~~~~~~~~~~~rl~~~ 159 (206)
T d1gm5a4 94 LVSTTVIEVGIDVPRANVMVIENPERFGLAQLHQLRGRVGRGGQEAYCFLVVGDVGEEAMERLRFF 159 (206)
T ss_dssp CCCSSCCCSCSCCTTCCEEEBCSCSSSCTTHHHHHHHTSCCSSTTCEEECCCCSCCHHHHHHHHHH
T ss_pred EEEehhhhccccccCCcEEEEEccCCccHHHHHhhhhheeeccccceeEeeeccccccchhhhhhc
Confidence 99999999999999999999988875 788889999999999999999999988766555555433
No 34
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.74 E-value=3.2e-18 Score=131.92 Aligned_cols=127 Identities=16% Similarity=0.110 Sum_probs=85.8
Q ss_pred CCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHh
Q 015093 77 GLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILS 156 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
.+..++.+|||||||..+...+. ..+.+++|++|++.|++|+.+.+.+..... .....++... .
T Consensus 8 ~~~~ll~apTGsGKT~~~~~~~~------~~~~~vli~~P~~~l~~q~~~~~~~~~~~~---~~~~~~~~~~-------~ 71 (136)
T d1a1va1 8 FQVAHLHAPTGSGKSTKVPAAYA------AQGYKVLVLNPSVAATLGFGAYMSKAHGVD---PNIRTGVRTI-------T 71 (136)
T ss_dssp CEEEEEECCTTSCTTTHHHHHHH------TTTCCEEEEESCHHHHHHHHHHHHHHHSCC---CEEECSSCEE-------C
T ss_pred CCEEEEEeCCCCCHHHHHHHHHH------HcCCcEEEEcChHHHHHHHHHHHHHHhhcc---cccccccccc-------c
Confidence 45689999999999976543332 124589999999999999999998865432 2233333221 1
Q ss_pred cCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccCcHHHHHHHHhhCC--CCceEEEEeeeC
Q 015093 157 AGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLP--GKIQVGVFSATM 223 (413)
Q Consensus 157 ~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~~~~~~~~~~~~~~--~~~~~i~lSAT~ 223 (413)
....+.++|.+.+.... ...+.++++||+||+|++... ....+..+++... ...+++++||||
T Consensus 72 ~~~~~~~~~~~~~~~~~---~~~~~~~~~vIiDE~H~~~~~-~~~~~~~~l~~~~~~~~~~~l~~TATP 136 (136)
T d1a1va1 72 TGSPITYSTYGKFLADG---GCSGGAYDIIICDECHSTDAT-SILGIGTVLDQAETAGARLVVLATATP 136 (136)
T ss_dssp CCCSEEEEEHHHHHHTT---GGGGCCCSEEEEETTTCCSHH-HHHHHHHHHHHTTTTTCSEEEEEESSC
T ss_pred cccceEEEeeeeecccc---chhhhcCCEEEEecccccCHH-HHHHHHHHHHHHHHCCCCcEEEEeCCC
Confidence 23578889888765432 234567899999999986432 2233445555443 366899999997
No 35
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.73 E-value=3.2e-17 Score=131.19 Aligned_cols=109 Identities=17% Similarity=0.251 Sum_probs=101.1
Q ss_pred CCCcEEEEEcCcccHHHHHHHHhhC--CCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCccccCCCCCCCCEEEEcC
Q 015093 278 AITQSVIFVNTRRKVDWLTDQMRSR--DHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD 355 (413)
Q Consensus 278 ~~~~~lIf~~~~~~a~~l~~~l~~~--~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~d~~~~~~vi~~~ 355 (413)
.++++-++||..+..+.+++.+++. +.++..+||.|++.++++++..|.+|+.+|||||.+++.|+|+|+++++|+.+
T Consensus 30 rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~~~eke~im~~F~~g~~~ILv~TtvIEvGiDvpnA~~iiI~~ 109 (211)
T d2eyqa5 30 RGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIER 109 (211)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCHHHHHHHHHHHHTTSCCEEEESSTTGGGSCCTTEEEEEETT
T ss_pred cCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccCHHHHHHHHHHHHcCCcceEEEehhhhhccCCCCCcEEEEec
Confidence 5679999999999999999999874 67899999999999999999999999999999999999999999999999888
Q ss_pred CC-CChhHHHhhhcccCCCCCcceEEEEeccc
Q 015093 356 LP-TQPENYLHRIGRSGRFGRKGVAINFVTRD 386 (413)
Q Consensus 356 ~~-~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~ 386 (413)
.. +..+++-|.-||+||.+..++|++++.+.
T Consensus 110 a~rfGLaQLhQLRGRVGR~~~~s~c~l~~~~~ 141 (211)
T d2eyqa5 110 ADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHP 141 (211)
T ss_dssp TTSSCHHHHHHHHTTCCBTTBCEEEEEEECCG
T ss_pred chhccccccccccceeeecCccceEEEEecCC
Confidence 76 58899999999999999999999999754
No 36
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.70 E-value=1.8e-18 Score=144.92 Aligned_cols=107 Identities=17% Similarity=0.208 Sum_probs=93.6
Q ss_pred CCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHH----------HHHHHHHhcCCCeEEEEeCcccc---CCC
Q 015093 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSR----------DIIMREFRSGSSRVLITTDLLAR---GID 344 (413)
Q Consensus 278 ~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r----------~~~~~~f~~~~~~vli~t~~~~~---G~d 344 (413)
..+++||||++++.++.+++.|++.|+++..+|++++.+.| .++++.|.+|+.+++|+|+.+.+ |+|
T Consensus 35 kggk~LVFcnSR~~aE~La~~L~~~Gi~a~~~Hgglsq~~R~~~gd~~i~~~~aLe~f~~G~~dvVVaT~~~a~g~~giD 114 (299)
T d1a1va2 35 KGGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDVSVIPTSGDVVVVATDALMTGFTGDFDSVIDCNTCVTQTVDFS 114 (299)
T ss_dssp HSSEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCGGGSCSSSSEEEEECTTC---CCCCBSEEEECCEEEEEEEECC
T ss_pred cCCCEEEECCcHHHHHHHHHHHHHCCCCEEEEeCCchHHHHHhccchHHHHHHHHHHHhcCCCcEEEEEeehhccCCCCC
Confidence 46799999999999999999999999999999999998765 45788899999999999999888 678
Q ss_pred CCCCCEEEEcCCCCChhHHHhhhcccCCCCCcceEEEEecc
Q 015093 345 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR 385 (413)
Q Consensus 345 ~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~ 385 (413)
++.+.+|++++.|.|..+|+||+||+|| |++|...++...
T Consensus 115 id~V~~VI~~d~P~SvesyIQRiGRTGR-Gr~G~~~~l~~~ 154 (299)
T d1a1va2 115 LDPTFTIETTTLPQDAVSRTQRRGRTGR-GKPGIYRFVAPG 154 (299)
T ss_dssp CSSSCEEEEEEEECBHHHHHHHHTTBCS-SSCEEEEESCSC
T ss_pred CCcceEEEeCCCCCCHHHHHhhccccCC-CCCceEEEEecC
Confidence 8888899999999999999999999999 888877665544
No 37
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.69 E-value=1.1e-19 Score=155.09 Aligned_cols=120 Identities=16% Similarity=0.261 Sum_probs=102.6
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEe----Ccc
Q 015093 264 EWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITT----DLL 339 (413)
Q Consensus 264 ~~~~~~l~~~~~~~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t----~~~ 339 (413)
+.++..+..+++... +++||||++++.|+.+++.|++. +||+++..+|.++++.|++|+++||||| +.+
T Consensus 11 ~~~~~~l~~~l~~~~-~~~iif~~~~~~~~~l~~~l~~~------~hg~~~~~~R~~~~~~f~~g~~~vLVaT~a~~~v~ 83 (248)
T d1gkub2 11 DESISTLSSILEKLG-TGGIIYARTGEEAEEIYESLKNK------FRIGIVTATKKGDYEKFVEGEIDHLIGTAHYYGTL 83 (248)
T ss_dssp CCCTTTTHHHHTTSC-SCEEEEESSHHHHHHHHHTTTTS------SCEEECTTSSSHHHHHHHHTSCSEEEEECC-----
T ss_pred chHHHHHHHHHHHhC-CCEEEEECCHHHHHHHHHHHHHh------ccCCCCHHHHHHHHHHHHhCCCeEEEEeccccchh
Confidence 457777888887654 67999999999999999999763 7999999999999999999999999999 678
Q ss_pred ccCCCCCC-CCEEEEcCCCCChhHHHhhhcccCCCCCcceEEEEeccccHHHHHHH
Q 015093 340 ARGIDVQQ-VSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADI 394 (413)
Q Consensus 340 ~~G~d~~~-~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~~~~~~~~ 394 (413)
++|+|+|+ +++||++++|+ |.|++||+||.|+.|.+++++...+......+
T Consensus 84 ~rGlDip~~v~~VI~~d~P~----~~~r~gR~~R~g~~~~~~~~~~~~~~~~~~~l 135 (248)
T d1gkub2 84 VRGLDLPERIRFAVFVGCPS----FRVTIEDIDSLSPQMVKLLAYLYRNVDEIERL 135 (248)
T ss_dssp -CCSCCTTTCCEEEEESCCE----EEEECSCGGGSCHHHHHHHHTTTSCHHHHHTT
T ss_pred hhccCccccccEEEEeCCCc----chhhhhhhhccCcceEeeeeccHhhHHHHHHH
Confidence 99999996 99999999994 88999999999999999998888776665543
No 38
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=99.60 E-value=9.7e-15 Score=127.64 Aligned_cols=157 Identities=15% Similarity=0.135 Sum_probs=102.8
Q ss_pred CCcHHHHhhhhhhh---------CCCcEEEeCCCCCchhHHHHHHHHHhccccc----CceeEEEEcccHHHHHHHHHHH
Q 015093 62 KPSAIQQRGIVPFC---------KGLDVIQQAQSGTGKTATFCSGILQQLDYES----LQCQALVLAPTRELAQQIEKVM 128 (413)
Q Consensus 62 ~~~~~Q~~~~~~~~---------~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~----~~~~~lvl~P~~~l~~q~~~~~ 128 (413)
.|+|||.+++..+. .+..+|+...+|.|||.+++..+...+.... ...++|||||. .+..||.+++
T Consensus 55 ~Lr~hQ~~gv~~l~~~~~~~~~~~~~g~iLaDemGlGKT~qaia~l~~l~~~~~~~~~~~~~~LIV~P~-sl~~qW~~Ei 133 (298)
T d1z3ix2 55 VLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPS-SLVRNWYNEV 133 (298)
T ss_dssp TCCHHHHHHHHHHHHHHTTSSSTTCCEEEECCCTTSCHHHHHHHHHHHHHHCCTTSSCSCSCEEEEECH-HHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhhhhccCCceEEEeCCCCCHHHHHHHHHHHHHHhcccccCCCCcEEEEccc-hhhHHHHHHH
Confidence 68999999997542 3456999999999999887655444433221 22369999997 5789999999
Q ss_pred HHhhcccCceEEEEECCcchHHHHHHH---h-----cCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccCcH
Q 015093 129 RALGDYMGVKVHACVGGTSVREDQRIL---S-----AGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFK 200 (413)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~~~ 200 (413)
.++.... ..+...+++.......... . ...+++++|++.+..... .+....+++||+||+|++.+.. .
T Consensus 134 ~k~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~sy~~~~~~~~--~l~~~~~~~vI~DEaH~ikn~~-s 209 (298)
T d1z3ix2 134 GKWLGGR-VQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHAE--VLHKGKVGLVICDEGHRLKNSD-N 209 (298)
T ss_dssp HHHHGGG-CCEEEECSSCHHHHHHHHHHHHCCCSSCCSCCEEEEEHHHHHHHTT--TTTTSCCCEEEETTGGGCCTTC-H
T ss_pred HhhcCCc-eeEEEEeCchHHHHHHHHHHhhhccCccccceEEEEeecccccchh--cccccceeeeeccccccccccc-c
Confidence 9987643 3334444444322222111 1 135799999998865433 2333457899999999986544 2
Q ss_pred HHHHHHHhhCCCCceEEEEeeeCCh
Q 015093 201 DQIYDIFQHLPGKIQVGVFSATMPP 225 (413)
Q Consensus 201 ~~~~~~~~~~~~~~~~i~lSAT~~~ 225 (413)
. ..+.+..+. ....+++||||..
T Consensus 210 ~-~~~a~~~l~-~~~rllLTGTPi~ 232 (298)
T d1z3ix2 210 Q-TYLALNSMN-AQRRVLISGTPIQ 232 (298)
T ss_dssp H-HHHHHHHHC-CSEEEEECSSCSG
T ss_pred h-hhhhhhccc-cceeeeecchHHh
Confidence 2 222333333 4567889999964
No 39
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=99.56 E-value=2e-14 Score=126.97 Aligned_cols=125 Identities=18% Similarity=0.220 Sum_probs=107.1
Q ss_pred ccHHHHHHHHHHh---cCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCe---EEEEeC
Q 015093 264 EWKLDTLCDLYET---LAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSR---VLITTD 337 (413)
Q Consensus 264 ~~~~~~l~~~~~~---~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~---vli~t~ 337 (413)
..|+..+..++.. ..+.|+|||++.....+.+.+.|...|+.+..++|.++..+|..+++.|+++... +|++|.
T Consensus 100 S~Kl~~L~~ll~~~~~~~g~KvlIFs~~~~~ld~l~~~l~~~g~~~~~l~G~~~~~~R~~~i~~F~~~~~~~~vlLls~~ 179 (346)
T d1z3ix1 100 SGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSSK 179 (346)
T ss_dssp SHHHHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHHSTTCCCCEEEEEGG
T ss_pred CHHHHHHHHHHHHHHHhcCCceeEEeehhhhhHHHHHHHhhhhccccccccchhHHHHHHHHHhhhcccccceeeeecch
Confidence 4567777666653 4567999999999999999999999999999999999999999999999987543 667788
Q ss_pred ccccCCCCCCCCEEEEcCCCCChhHHHhhhcccCCCCCcceE--EEEeccccH
Q 015093 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVA--INFVTRDDD 388 (413)
Q Consensus 338 ~~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~--~~~~~~~~~ 388 (413)
+.+.|+|++.+++||+++++|++..+.|++||+.|.|+...| +.++.....
T Consensus 180 agg~GlnL~~a~~vi~~d~~wnp~~~~Qa~~R~~R~GQ~~~V~v~rli~~~Ti 232 (346)
T d1z3ix1 180 AGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTI 232 (346)
T ss_dssp GSCTTCCCTTEEEEEECSCCSSHHHHHHHHTTSSSTTCCSCEEEEEEEETTSH
T ss_pred hhhhccccccceEEEEecCCCccchHhHhhhcccccCCCCceEEEEEEeCCCH
Confidence 999999999999999999999999999999999999986544 445555544
No 40
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.55 E-value=7.3e-15 Score=123.44 Aligned_cols=150 Identities=15% Similarity=0.137 Sum_probs=100.1
Q ss_pred CCcHHHHhhhhhhh----CCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCc
Q 015093 62 KPSAIQQRGIVPFC----KGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGV 137 (413)
Q Consensus 62 ~~~~~Q~~~~~~~~----~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~ 137 (413)
+|++||.+++..+. .+..+++..++|.|||..++..+.... ......++||+||. .+..||.+++.++....
T Consensus 12 ~L~~yQ~~~v~~~~~~~~~~~g~iLaDe~GlGKT~~~i~~~~~~~-~~~~~~~~LIv~p~-~l~~~W~~e~~~~~~~~-- 87 (230)
T d1z63a1 12 NLRPYQIKGFSWMRFMNKLGFGICLADDMGLGKTLQTIAVFSDAK-KENELTPSLVICPL-SVLKNWEEELSKFAPHL-- 87 (230)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCCEEECCCTTSCHHHHHHHHHHHHH-HTTCCSSEEEEECS-TTHHHHHHHHHHHCTTS--
T ss_pred chhHHHHHHHHHHHHhhhcCCCEEEEeCCCCChHHHHHHhhhhhh-hcccccccceecch-hhhhHHHHHHHhhcccc--
Confidence 68999999997653 345699999999999999865554443 33334589999995 67888999999886533
Q ss_pred eEEEEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccCcHHHHHHHHhhCCCCceEE
Q 015093 138 KVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVG 217 (413)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i 217 (413)
.+.......... ...+.+|+++|++.+.....- ....+++||+||+|.+.+... ...+....+. ....+
T Consensus 88 ~~~~~~~~~~~~-----~~~~~~vvi~~~~~~~~~~~l---~~~~~~~vI~DEah~~k~~~s--~~~~~~~~l~-a~~r~ 156 (230)
T d1z63a1 88 RFAVFHEDRSKI-----KLEDYDIILTTYAVLLRDTRL---KEVEWKYIVIDEAQNIKNPQT--KIFKAVKELK-SKYRI 156 (230)
T ss_dssp CEEECSSSTTSC-----CGGGSSEEEEEHHHHTTCHHH---HTCCEEEEEEETGGGGSCTTS--HHHHHHHTSC-EEEEE
T ss_pred cceeeccccchh-----hccCcCEEEeeHHHHHhHHHH---hcccceEEEEEhhhcccccch--hhhhhhhhhc-cceEE
Confidence 333332221111 123468999999988543221 122368999999999865442 2223344443 45578
Q ss_pred EEeeeCChh
Q 015093 218 VFSATMPPE 226 (413)
Q Consensus 218 ~lSAT~~~~ 226 (413)
++||||..+
T Consensus 157 ~LTgTPi~n 165 (230)
T d1z63a1 157 ALTGTPIEN 165 (230)
T ss_dssp EECSSCSTT
T ss_pred EEecchHHh
Confidence 999999753
No 41
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.50 E-value=5.5e-14 Score=118.94 Aligned_cols=125 Identities=15% Similarity=0.205 Sum_probs=92.8
Q ss_pred ccHHHHHHHHHHhc--CCCcEEEEEcCcccHHHHHHHHhhC-CCeeEeecCCCCHHHHHHHHHHHhcCC-CeEEEE-eCc
Q 015093 264 EWKLDTLCDLYETL--AITQSVIFVNTRRKVDWLTDQMRSR-DHTVSATHGDMDQNSRDIIMREFRSGS-SRVLIT-TDL 338 (413)
Q Consensus 264 ~~~~~~l~~~~~~~--~~~~~lIf~~~~~~a~~l~~~l~~~-~~~~~~~~~~~~~~~r~~~~~~f~~~~-~~vli~-t~~ 338 (413)
..|+..+.+++... .+.++||||+.....+.+...+... +..+..++|+++..+|.++++.|.++. ..++++ +.+
T Consensus 68 S~K~~~l~~~l~~~~~~g~kviIFs~~~~~~~~l~~~l~~~~~~~~~~i~G~~~~~~R~~~i~~F~~~~~~~vll~~~~~ 147 (244)
T d1z5za1 68 SGKMIRTMEIIEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNPSVKFIVLSVKA 147 (244)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHHHCSCCCEECTTSCHHHHHHHHHHHHHCTTCCEEEEECCT
T ss_pred hhHHHHHHHHHHhhcccccceEEEeeceehHHHHHHHHHhhccceEEEEecccchhccchhhhhhhccccchhccccccc
Confidence 45788888887653 5679999999999999998888654 788889999999999999999998764 566655 579
Q ss_pred cccCCCCCCCCEEEEcCCCCChhHHHhhhcccCCCCCc--ceEEEEeccccH
Q 015093 339 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRK--GVAINFVTRDDD 388 (413)
Q Consensus 339 ~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~--g~~~~~~~~~~~ 388 (413)
.++|+|++.+++||+++++|++..+.|++||+.|.|+. -.++.++.....
T Consensus 148 ~g~Glnl~~a~~vi~~~~~wn~~~~~Qa~~R~~R~Gq~~~v~i~~l~~~~Ti 199 (244)
T d1z5za1 148 GGFGINLTSANRVIHFDRWWNPAVEDQATDRVYRIGQTRNVIVHKLISVGTL 199 (244)
T ss_dssp TCCCCCCTTCSEEEECSCCSCTTTC--------------CCEEEEEEETTSH
T ss_pred cccccccchhhhhhhcCchhhhHHHhhhcceeeecCCCCceEEEEEeeCCCH
Confidence 99999999999999999999999999999999999864 445555666543
No 42
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=99.46 E-value=9.9e-14 Score=118.78 Aligned_cols=101 Identities=14% Similarity=0.221 Sum_probs=81.1
Q ss_pred CCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCccccCCCCCCCCEEEEcCC--
Q 015093 279 ITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDL-- 356 (413)
Q Consensus 279 ~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~d~~~~~~vi~~~~-- 356 (413)
.++++|||++..+++.+++.|++.|.++..+||.+...++++ +++++.++||||++++.|+|+ ++.+||+.+.
T Consensus 36 ~g~~~~F~~s~~~~~~~a~~L~~~g~~V~~l~~~~~~~e~~~----~~~~~~~~~~~t~~~~~~~~~-~~~~vid~g~~~ 110 (299)
T d1yksa2 36 KRPTAWFLPSIRAANVMAASLRKAGKSVVVLNRKTFEREYPT----IKQKKPDFILATDIAEMGANL-CVERVLDCRTAF 110 (299)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHTTCCEEECCSSSCC------------CCCSEEEESSSTTCCTTC-CCSEEEECCEEE
T ss_pred CCCEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCcCcHhHHhh----hhcCCcCEEEEechhhhceec-CceEEEecCcee
Confidence 579999999999999999999999999999999998777654 678999999999999999999 5999987653
Q ss_pred -----------------CCChhHHHhhhcccCCCCCcceEEEEec
Q 015093 357 -----------------PTQPENYLHRIGRSGRFGRKGVAINFVT 384 (413)
Q Consensus 357 -----------------~~s~~~~~Q~~GR~~R~g~~g~~~~~~~ 384 (413)
|.|..+..||.||+||.+....++.++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~qr~gr~gr~~~~~~~~~~y~ 155 (299)
T d1yksa2 111 KPVLVDEGRKVAIKGPLRISASSAAQRRGRIGRNPNRDGDSYYYS 155 (299)
T ss_dssp EEEEETTTTEEEEEEEEECCHHHHHHHHTTSSCCTTCCCEEEEEC
T ss_pred ceeeecCCCCeeEEeeeecCHHHHHHhcccccccCCCceEEEEeC
Confidence 2577888999999999865444555554
No 43
>d1tf5a4 c.37.1.19 (A:396-570) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=99.43 E-value=1.8e-12 Score=99.83 Aligned_cols=124 Identities=15% Similarity=0.228 Sum_probs=98.6
Q ss_pred CccccHHHHHHHHHHhc--CCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcC-CCeEEEEeC
Q 015093 261 DKEEWKLDTLCDLYETL--AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSG-SSRVLITTD 337 (413)
Q Consensus 261 ~~~~~~~~~l~~~~~~~--~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~-~~~vli~t~ 337 (413)
.....++.++...++.. .+.|+||++.|++.++.+++.|++.++++.+++......+.+ ++. ..| ...|.|+|+
T Consensus 14 ~T~~eK~~AIi~eV~~~~~~grPVLIgT~SIe~SE~ls~~L~~~gi~h~vLnAk~~~~Ea~-II~--~Ag~~g~VtIATN 90 (175)
T d1tf5a4 14 RTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLKNKGIPHQVLNAKNHEREAQ-IIE--EAGQKGAVTIATN 90 (175)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTCCEEEEESCHHHHHHHHHHHHTTTCCCEEECSSCHHHHHH-HHT--TTTSTTCEEEEET
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHHHcCCCceeehhhhHHHHHH-HHH--hccCCCceeehhh
Confidence 34455666666655433 567999999999999999999999999999999886543333 332 233 346999999
Q ss_pred ccccCCCCC--------CCCEEEEcCCCCChhHHHhhhcccCCCCCcceEEEEecccc
Q 015093 338 LLARGIDVQ--------QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 387 (413)
Q Consensus 338 ~~~~G~d~~--------~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~ 387 (413)
++++|.|+. +--+||....+.|.....|..||+||.|.+|...+|++-.|
T Consensus 91 mAGRGtDikl~~~v~~~GGLhVI~t~~~~s~Rid~Ql~GR~gRQGdpGs~~~~~sleD 148 (175)
T d1tf5a4 91 MAGRGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMED 148 (175)
T ss_dssp TSSTTCCCCCCTTSGGGTSEEEEESSCCSSHHHHHHHHTTSSGGGCCEEEEEEEETTS
T ss_pred HHHcCCCccchHHHHhCCCcEEEEeccCcchhHHHHHhcchhhhCCCcccEEEEEcCH
Confidence 999999985 34468888899999999999999999999999999997655
No 44
>d1tf5a3 c.37.1.19 (A:1-226,A:349-395) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=99.26 E-value=8.2e-11 Score=96.50 Aligned_cols=167 Identities=19% Similarity=0.220 Sum_probs=124.3
Q ss_pred CCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEE
Q 015093 62 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHA 141 (413)
Q Consensus 62 ~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~ 141 (413)
.|++.|.-+--.+..|+ +..+.||-|||+++.+|+.-....+ ..+-|++.+.-|+..-.+++..+...+|+++++
T Consensus 80 RhyDVQLiGgi~L~~G~--iaem~TGEGKTL~a~l~a~l~al~g---~~vhvvTvNdyLA~RDae~m~~iy~~lGlsvg~ 154 (273)
T d1tf5a3 80 FPFKVQLMGGVALHDGN--IAEMKTGEGKTLTSTLPVYLNALTG---KGVHVVTVNEYLASRDAEQMGKIFEFLGLTVGL 154 (273)
T ss_dssp CCCHHHHHHHHHHHTTS--EEECCTTSCHHHHHHHHHHHHHTTS---SCEEEEESSHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEehhHHHHHHHHHhhh--heeecCCCcchhHHHHHHHHHHhcC---CCceEEecCccccchhhhHHhHHHHHcCCCccc
Confidence 78899988888887776 9999999999999887776544443 378999999999999999999999999999999
Q ss_pred EECCcchHHHHHHHhcCCcEEEeChHHHH-HHHHcC------CCCCCCccEEEEccchhhh-ccCcH-------------
Q 015093 142 CVGGTSVREDQRILSAGVHVVVGTPGRVF-DMLRRQ------SLRPDYIRMFVLDEADEML-SRGFK------------- 200 (413)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~Iii~T~~~l~-~~~~~~------~~~~~~~~~iIiDE~h~~~-~~~~~------------- 200 (413)
...+.......... .++|+++|...|. +.++.. ......+.+.|+||+|.++ +....
T Consensus 155 ~~~~~~~~~r~~~Y--~~di~Ygt~~e~~fDyLrd~~~~~~~~~~~r~~~~aIvDEvDsiliDeartpliisg~~~~~a~ 232 (273)
T d1tf5a3 155 NLNSMSKDEKREAY--AADITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAVIDEVDSILIDEARTPLIISGQSMTLAT 232 (273)
T ss_dssp CCTTSCHHHHHHHH--HSSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEEETHHHHHTTTTTCEEEEEEEEEEEEE
T ss_pred cccccCHHHHHHHh--hCCceecchhhhhhhhcchhhhcChhhhccCCCCEEEEEcchhhhhhccCCceEeccCccchhh
Confidence 98877765554444 4799999999884 444432 1224557899999999865 22110
Q ss_pred HHHHHHHhhCCCCceEEEEeeeCChhHHHHHHHhcCCC
Q 015093 201 DQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKP 238 (413)
Q Consensus 201 ~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~~~~~~~~~ 238 (413)
-.++..++..+ ++.+||+|......++...|..+.
T Consensus 233 it~q~~f~~y~---~l~gmtgta~~~~~e~~~iy~l~v 267 (273)
T d1tf5a3 233 ITFQNYFRMYE---KLAGMTGTAKTEEEEFRNIYNMQV 267 (273)
T ss_dssp EEHHHHHTTSS---EEEEEESCCGGGHHHHHHHHCCCE
T ss_pred hhHHHHHHHHH---HHhCCccccHHHHHHHHhccCCce
Confidence 12445666664 689999999877766666655443
No 45
>d1nkta3 c.37.1.19 (A:-15-225,A:350-396) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.22 E-value=1.1e-10 Score=96.06 Aligned_cols=166 Identities=18% Similarity=0.224 Sum_probs=122.4
Q ss_pred CCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEE
Q 015093 62 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHA 141 (413)
Q Consensus 62 ~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~ 141 (413)
.+++.|.-.--.+..| -+..+.||-|||+++.+|+.-....+ ..+-|++.+.-|+..-.+++..+...+|+++++
T Consensus 97 RhyDVQLiGgi~l~~g--~iaem~TGEGKTL~a~l~a~l~al~g---~~vhvvTvNdyLA~RDa~~m~~~y~~lGlsvg~ 171 (288)
T d1nkta3 97 RPFDVQVMGAAALHLG--NVAEMKTGEGKTLTCVLPAYLNALAG---NGVHIVTVNDYLAKRDSEWMGRVHRFLGLQVGV 171 (288)
T ss_dssp CCCHHHHHHHHHHHTT--EEEECCTTSCHHHHTHHHHHHHHTTT---SCEEEEESSHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred eeeeehhHHHHHHhhh--hhhcccCCCchhHHHHHHHHHHHhcC---CCeEEEecCchhhhhhHHHHHHHHHHhCCCcCc
Confidence 7888898887777555 49999999999999988776554443 378999999999999999999999999999999
Q ss_pred EECCcchHHHHHHHhcCCcEEEeChHHHH-HHHHcC------CCCCCCccEEEEccchhhh-ccCcH-----------HH
Q 015093 142 CVGGTSVREDQRILSAGVHVVVGTPGRVF-DMLRRQ------SLRPDYIRMFVLDEADEML-SRGFK-----------DQ 202 (413)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~Iii~T~~~l~-~~~~~~------~~~~~~~~~iIiDE~h~~~-~~~~~-----------~~ 202 (413)
...+......... -.++|+++|...|- +.++.. ......+.+.|+||+|.++ +.... -.
T Consensus 172 ~~~~~~~~~~~~~--Y~~di~Y~t~~e~gfDyLrd~~~~~~~~~~~r~~~~aIvDEvDsiLiDeartpLiis~~~~a~it 249 (288)
T d1nkta3 172 ILATMTPDERRVA--YNADITYGTNNEFGFDYLRDNMAHSLDDLVQRGHHYAIVDEVDSILIDEARTPLIISNQTLATIT 249 (288)
T ss_dssp CCTTCCHHHHHHH--HHSSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEETTHHHHHTTGGGSCEEEEEEEEEEEC
T ss_pred ccccCChHHHHHH--hhcccccccHHHHhhhhhhhhhccChhhhcccCCcEEEEEcccccccccccCceEeccCCcchhh
Confidence 9988776555444 34799999998884 444332 1224457899999999865 32211 12
Q ss_pred HHHHHhhCCCCceEEEEeeeCChhHHHHHHHhcCC
Q 015093 203 IYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNK 237 (413)
Q Consensus 203 ~~~~~~~~~~~~~~i~lSAT~~~~~~~~~~~~~~~ 237 (413)
++..++.+. ++-+||+|...+..++...|...
T Consensus 250 ~qn~fr~y~---kl~gmtgta~te~~E~~~iy~l~ 281 (288)
T d1nkta3 250 LQNYFRLYD---KLAGMTGTAQTEAAELHEIYKLG 281 (288)
T ss_dssp HHHHHTTSS---EEEEEESCCGGGHHHHHHHHCCE
T ss_pred HHHHHHHHH---HHhCCcccHHHHHHHHHHHhCCc
Confidence 344555543 58899999987777776665443
No 46
>d1nkta4 c.37.1.19 (A:397-615) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.98 E-value=4.8e-09 Score=81.97 Aligned_cols=126 Identities=19% Similarity=0.227 Sum_probs=99.0
Q ss_pred CccccHHHHHHHHHHhc--CCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCC-CeEEEEeC
Q 015093 261 DKEEWKLDTLCDLYETL--AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGS-SRVLITTD 337 (413)
Q Consensus 261 ~~~~~~~~~l~~~~~~~--~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~-~~vli~t~ 337 (413)
.....|+.++...++.. .+.|+||.+.|++..+.+.+.|++.++++.++++.....|-+ ++. +.|. ..|-|+|+
T Consensus 14 ~T~~~K~~Avv~ei~~~h~~GqPVLVGT~SVe~SE~lS~lL~~~gi~h~vLNAK~herEAe-IIA--qAG~~GaVTIATN 90 (219)
T d1nkta4 14 KTEEAKYIAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFTKRRIPHNVLNAKYHEQEAT-IIA--VAGRRGGVTVATN 90 (219)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEECSSCHHHHHH-HHH--TTTSTTCEEEEET
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCEEEeeCcHHHHHHHHHHHHHhccchhccchhhHHHHHH-HHH--hcccCCcEEeecc
Confidence 44456777776665543 667999999999999999999999999999999986533332 333 3444 45889999
Q ss_pred ccccCCCCCC----------------------------------------------------CCEEEEcCCCCChhHHHh
Q 015093 338 LLARGIDVQQ----------------------------------------------------VSLVINYDLPTQPENYLH 365 (413)
Q Consensus 338 ~~~~G~d~~~----------------------------------------------------~~~vi~~~~~~s~~~~~Q 365 (413)
|+++|.|+.= =-+||-.....|...=.|
T Consensus 91 MAGRGTDI~LGgn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~GGL~VIGTErHeSrRIDnQ 170 (219)
T d1nkta4 91 MAGRGTDIVLGGNVDFLTDQRLRERGLDPVETPEEYEAAWHSELPIVKEEASKEAKEVIEAGGLYVLGTERHESRRIDNQ 170 (219)
T ss_dssp TCSTTCCCCTTCCHHHHHHHHHHHTTCCTTTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTSEEEEECSCCSSHHHHHH
T ss_pred ccCCCCceeecCchhhhhHHHhhhcccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecccccccccccc
Confidence 9999999831 225677777788888899
Q ss_pred hhcccCCCCCcceEEEEeccccHH
Q 015093 366 RIGRSGRFGRKGVAINFVTRDDDR 389 (413)
Q Consensus 366 ~~GR~~R~g~~g~~~~~~~~~~~~ 389 (413)
.-||+||.|.+|.+.+|++-.|.-
T Consensus 171 LRGRsGRQGDPGsSrFflSLeDdL 194 (219)
T d1nkta4 171 LRGRSGRQGDPGESRFYLSLGDEL 194 (219)
T ss_dssp HHHTSSGGGCCEEEEEEEETTSHH
T ss_pred ccccccccCCCccceeEEeccHHH
Confidence 999999999999999999987754
No 47
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=98.47 E-value=3.9e-07 Score=80.04 Aligned_cols=141 Identities=18% Similarity=0.197 Sum_probs=83.0
Q ss_pred CCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHH--HHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCce
Q 015093 61 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI--LQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVK 138 (413)
Q Consensus 61 ~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i--~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~ 138 (413)
..+.+.|..|+..++.++-++|.||+|||||.+....+ +.... ...+.++++++||-.-+....+............
T Consensus 147 ~~~~~~Q~~A~~~al~~~~~vI~G~pGTGKTt~i~~~l~~l~~~~-~~~~~~I~l~ApTgkAA~~L~e~~~~~~~~~~~~ 225 (359)
T d1w36d1 147 SDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMA-DGERCRIRLAAPTGKAAARLTESLGKALRQLPLT 225 (359)
T ss_dssp TTSCCHHHHHHHHHHTBSEEEEECCTTSTHHHHHHHHHHHHHHTC-SSCCCCEEEEBSSHHHHHHHHHHHTHHHHHSSCC
T ss_pred cccccHHHHHHHHHHcCCeEEEEcCCCCCceehHHHHHHHHHHHH-hccCCeEEEecCcHHHHHHHHHHHHHHHhhcCch
Confidence 35678899999999998889999999999998753322 22222 2335589999999887777666554432211110
Q ss_pred EEEEECCcchHHHHHHHhcCCcEEEeChHHHH------HHHHcCCCCCCCccEEEEccchhhhccCcHHHHHHHHhhCCC
Q 015093 139 VHACVGGTSVREDQRILSAGVHVVVGTPGRVF------DMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPG 212 (413)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~------~~~~~~~~~~~~~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~ 212 (413)
..... ....-..|.+.+. ..+.........++++|+||+-.+ -...+..++..+++
T Consensus 226 ~~~~~--------------~~~~~~~t~~~ll~~~~~~~~~~~~~~~~l~~d~lIIDEaSmv----~~~l~~~ll~~~~~ 287 (359)
T d1w36d1 226 DEQKK--------------RIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMI----DLPMMSRLIDALPD 287 (359)
T ss_dssp SCCCC--------------SCSCCCBTTTSCC-----------CTTSCCSCSEEEECSGGGC----BHHHHHHHHHTCCT
T ss_pred hhhhh--------------hhhhhhhHHHHHHhhhhcchHHHHhhhcccccceeeehhhhcc----CHHHHHHHHHHhcC
Confidence 00000 0000011111111 111222233345789999999975 34556678888888
Q ss_pred CceEEEEe
Q 015093 213 KIQVGVFS 220 (413)
Q Consensus 213 ~~~~i~lS 220 (413)
..++|++.
T Consensus 288 ~~~lILvG 295 (359)
T d1w36d1 288 HARVIFLG 295 (359)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEC
Confidence 88877554
No 48
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=98.04 E-value=4.4e-06 Score=71.99 Aligned_cols=69 Identities=14% Similarity=0.061 Sum_probs=52.2
Q ss_pred CCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhcccc-cCceeEEEEcccHHHHHHHHHHHHHhh
Q 015093 62 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYE-SLQCQALVLAPTRELAQQIEKVMRALG 132 (413)
Q Consensus 62 ~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~-~~~~~~lvl~P~~~l~~q~~~~~~~~~ 132 (413)
+|+|-|.+++.. ....++|.|++|||||.+.+.-+...+... ....+++++++|++++....+.+.+..
T Consensus 1 ~L~~eQ~~av~~--~~~~~lI~g~aGTGKTt~l~~rv~~ll~~~~~~~~~ILvlt~tn~a~~~i~~~~~~~~ 70 (306)
T d1uaaa1 1 RLNPGQQQAVEF--VTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTL 70 (306)
T ss_dssp CCCHHHHHHHHC--CSSEEEECCCTTSCHHHHHHHHHHHHHHHHCCCGGGEEEEESSHHHHHHHHHHHHHHS
T ss_pred CcCHHHHHHHhC--CCCCEEEEeeCCccHHHHHHHHHHHHHHhcCCChhHEEEEeCcHHHHHHHHHHHHHhc
Confidence 478899999975 346699999999999988765554444332 223489999999999998877776654
No 49
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=97.96 E-value=9.4e-06 Score=65.36 Aligned_cols=139 Identities=11% Similarity=0.025 Sum_probs=69.6
Q ss_pred CcHHHHhhhhhhhC----CC---cEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhccc
Q 015093 63 PSAIQQRGIVPFCK----GL---DVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYM 135 (413)
Q Consensus 63 ~~~~Q~~~~~~~~~----~~---~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~ 135 (413)
+||||..+++.+.+ ++ ..++.||+|+|||..+...+-..+..........-.+++ + ..+.. ..
T Consensus 3 ~yPw~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~---~----~~i~~---~~ 72 (207)
T d1a5ta2 3 WYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG---C----QLMQA---GT 72 (207)
T ss_dssp CCGGGHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHH---H----HHHHH---TC
T ss_pred CCcccHHHHHHHHHHHHcCCcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccch---h----hhhhh---cc
Confidence 56888887776533 32 389999999999988755554443332222121111221 1 11111 11
Q ss_pred CceEEEEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccCcHHHHHHHHhhCCCCce
Q 015093 136 GVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQ 215 (413)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~~ 215 (413)
...+........ ...+-+-....+...+.... .....+++|+||+|.+... ....+.+++...+.+..
T Consensus 73 ~~~~~~~~~~~~----------~~~i~~~~ir~l~~~~~~~~-~~~~~kviIide~d~l~~~-a~n~Llk~lEep~~~~~ 140 (207)
T d1a5ta2 73 HPDYYTLAPEKG----------KNTLGVDAVREVTEKLNEHA-RLGGAKVVWVTDAALLTDA-AANALLKTLEEPPAETW 140 (207)
T ss_dssp CTTEEEECCCTT----------CSSBCHHHHHHHHHHTTSCC-TTSSCEEEEESCGGGBCHH-HHHHHHHHHTSCCTTEE
T ss_pred ccccchhhhhhc----------ccccccchhhHHhhhhhhcc-ccCccceEEechhhhhhhh-hhHHHHHHHHhhcccce
Confidence 222222221110 01111111112222222222 2334689999999987433 46677788888777776
Q ss_pred EEEEeeeC
Q 015093 216 VGVFSATM 223 (413)
Q Consensus 216 ~i~lSAT~ 223 (413)
+++.|-.+
T Consensus 141 fIl~t~~~ 148 (207)
T d1a5ta2 141 FFLATREP 148 (207)
T ss_dssp EEEEESCG
T ss_pred eeeeecCh
Confidence 66655444
No 50
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=97.80 E-value=2.1e-05 Score=68.02 Aligned_cols=68 Identities=18% Similarity=0.198 Sum_probs=53.0
Q ss_pred CCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhccccc-CceeEEEEcccHHHHHHHHHHHHHh
Q 015093 62 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYES-LQCQALVLAPTRELAQQIEKVMRAL 131 (413)
Q Consensus 62 ~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~-~~~~~lvl~P~~~l~~q~~~~~~~~ 131 (413)
.|++-|.+++++. +..++|.|++|||||.+.+.-+...+.... ...+++++++++..+......+...
T Consensus 11 ~L~~eQ~~~v~~~--~g~~lV~g~aGSGKTt~l~~ri~~ll~~~~~~p~~il~lt~t~~aa~~~~~~~~~~ 79 (318)
T d1pjra1 11 HLNKEQQEAVRTT--EGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSL 79 (318)
T ss_dssp TSCHHHHHHHHCC--SSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHhCC--CCCEEEEecCCccHHHHHHHHHHHHHHcCCCCHHHeEeEeccHHHHHHHHHHHHhh
Confidence 4788999999863 556999999999999988766655554332 2248999999999999888877664
No 51
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.50 E-value=0.00016 Score=57.32 Aligned_cols=113 Identities=8% Similarity=0.084 Sum_probs=66.1
Q ss_pred HHhhhhhhhCC---CcEEEeCCCCCchhHHHHHHHHHhccc-ccCceeEEEEcccHH-H-HHHHHHHHHHhhcccCceEE
Q 015093 67 QQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDY-ESLQCQALVLAPTRE-L-AQQIEKVMRALGDYMGVKVH 140 (413)
Q Consensus 67 Q~~~~~~~~~~---~~~lv~~~tGsGKT~~~~~~i~~~l~~-~~~~~~~lvl~P~~~-l-~~q~~~~~~~~~~~~~~~~~ 140 (413)
|.+.+..+.+. .++++.||.|+|||..+...+- .+.. ....+-++++.|... . .+|..
T Consensus 2 ~~~~l~~~i~~~~~~~~l~~G~~g~gk~~~a~~l~~-~i~~~~~~h~D~~~i~~~~~~I~Id~IR--------------- 65 (198)
T d2gnoa2 2 QLETLKRIIEKSEGISILINGEDLSYPREVSLELPE-YVEKFPPKASDVLEIDPEGENIGIDDIR--------------- 65 (198)
T ss_dssp HHHHHHHHHHTCSSEEEEEECSSSSHHHHHHHHHHH-HHHTSCCCTTTEEEECCSSSCBCHHHHH---------------
T ss_pred HHHHHHHHHhcCCCceEEEECCCCCCHHHHHHHHHH-HHhccccCCCCEEEEeCCcCCCCHHHHH---------------
Confidence 55555555443 4599999999999988754432 2211 111223666666311 0 11111
Q ss_pred EEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccCcHHHHHHHHhhCCCCceEEEEe
Q 015093 141 ACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220 (413)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~lS 220 (413)
.+.+.+...+. ....+++|+||||.+. .....++.+++..-|++..++++|
T Consensus 66 ---------------------------~i~~~~~~~~~-~~~~KviIId~ad~l~-~~aqNaLLK~LEEPp~~t~fiLit 116 (198)
T d2gnoa2 66 ---------------------------TIKDFLNYSPE-LYTRKYVIVHDCERMT-QQAANAFLKALEEPPEYAVIVLNT 116 (198)
T ss_dssp ---------------------------HHHHHHTSCCS-SSSSEEEEETTGGGBC-HHHHHHTHHHHHSCCTTEEEEEEE
T ss_pred ---------------------------HHHHHHhhCcc-cCCCEEEEEeCccccc-hhhhhHHHHHHhCCCCCceeeecc
Confidence 12222222222 2346899999999874 335677888888888888777776
Q ss_pred eeCC
Q 015093 221 ATMP 224 (413)
Q Consensus 221 AT~~ 224 (413)
..+.
T Consensus 117 ~~~~ 120 (198)
T d2gnoa2 117 RRWH 120 (198)
T ss_dssp SCGG
T ss_pred CChh
Confidence 6654
No 52
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=97.32 E-value=0.00022 Score=56.66 Aligned_cols=132 Identities=22% Similarity=0.244 Sum_probs=68.1
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCC
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
+++++|||+|||.+..-.+.. +.. + +.++.+++.-.... ...++++.+++..++.+...............
T Consensus 13 i~lvGp~GvGKTTTiaKLA~~-~~~-~-g~kV~lit~Dt~R~-gA~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~----- 83 (207)
T d1ls1a2 13 WFLVGLQGSGKTTTAAKLALY-YKG-K-GRRPLLVAADTQRP-AAREQLRLLGEKVGVPVLEVMDGESPESIRRR----- 83 (207)
T ss_dssp EEEECCTTTTHHHHHHHHHHH-HHH-T-TCCEEEEECCSSCH-HHHHHHHHHHHHHTCCEEECCTTCCHHHHHHH-----
T ss_pred EEEECCCCCCHHHHHHHHHHH-HHH-C-CCcEEEEecccccc-hHHHHHHHHHHhcCCccccccccchhhHHHHH-----
Confidence 677999999999887555443 322 2 23555555422221 12344555555556655444333221111000
Q ss_pred cEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhcc-CcHHHHHHHHhhCCCCceEEEEeeeCChhHHHHHHHh
Q 015093 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKF 234 (413)
Q Consensus 160 ~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~-~~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~~~~~ 234 (413)
...... ..+.++|++|=+-+.... .....+.++.+...+...++.++|+...+.......+
T Consensus 84 ---------~~~~~~-----~~~~d~vlIDTaGr~~~d~~~~~el~~~~~~~~~~~~llv~~a~~~~~~~~~~~~f 145 (207)
T d1ls1a2 84 ---------VEEKAR-----LEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARAF 145 (207)
T ss_dssp ---------HHHHHH-----HHTCCEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGTHHHHHHHHHH
T ss_pred ---------HHHHHh-----hccCcceeecccccchhhhhhHHHHHHHHhhcCCceEEEEeccccchhHHHHHHHH
Confidence 000001 122578888877764322 2334555555556656667788888776655555443
No 53
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=97.32 E-value=0.00021 Score=67.68 Aligned_cols=70 Identities=17% Similarity=0.182 Sum_probs=54.7
Q ss_pred CCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHHHHHHHhccccc-CceeEEEEcccHHHHHHHHHHHHHhh
Q 015093 61 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYES-LQCQALVLAPTRELAQQIEKVMRALG 132 (413)
Q Consensus 61 ~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~-~~~~~lvl~P~~~l~~q~~~~~~~~~ 132 (413)
..|++-|++++.. ..+.++|.|+.|||||.+.+.-+...+.... ...++++++.|+..++++.+.+....
T Consensus 10 ~~L~~eQ~~~v~~--~~~~~lV~A~AGSGKT~~lv~ri~~ll~~~~~~p~~Il~ltft~~Aa~ei~~Ri~~~l 80 (623)
T g1qhh.1 10 AHLNKEQQEAVRT--TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLL 80 (623)
T ss_dssp TTSCHHHHHHHHC--CSSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHcC--CCCCEEEEEeCchHHHHHHHHHHHHHHHcCCCCcccEEEEeccHHHHHHHHHHHHHhc
Confidence 4689999999974 4566899999999999998776665554432 23479999999999999888887654
No 54
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=97.16 E-value=0.00076 Score=53.38 Aligned_cols=130 Identities=15% Similarity=0.206 Sum_probs=64.8
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCC
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
++++||||+|||.+..-.+. .+.. . +.++.+++.-.-.+. ..++++.++...++.+.....+......
T Consensus 12 i~lvGptGvGKTTTiAKLA~-~~~~-~-g~kV~lit~Dt~R~g-A~eQL~~~a~~l~v~~~~~~~~~d~~~~-------- 79 (211)
T d2qy9a2 12 ILMVGVNGVGKTTTIGKLAR-QFEQ-Q-GKSVMLAAGDTFRAA-AVEQLQVWGQRNNIPVIAQHTGADSASV-------- 79 (211)
T ss_dssp EEEECCTTSCHHHHHHHHHH-HHHT-T-TCCEEEECCCTTCHH-HHHHHHHHHHHTTCCEECCSTTCCHHHH--------
T ss_pred EEEECCCCCCHHHHHHHHHH-HHHH-C-CCcEEEEeccccccc-chhhhhhhhhhcCCcccccccCCCHHHH--------
Confidence 66799999999988765543 3332 2 235555544332221 3455666666666665443333221111
Q ss_pred cEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhcc-CcHHHHHHHHhhCC------CCceEEEEeeeCChhHHHHHH
Q 015093 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSR-GFKDQIYDIFQHLP------GKIQVGVFSATMPPEALEITR 232 (413)
Q Consensus 160 ~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~-~~~~~~~~~~~~~~------~~~~~i~lSAT~~~~~~~~~~ 232 (413)
+.+.... ....++++|++|=+-+.... .....+.++.+... +...++.++|+...+......
T Consensus 80 ---------l~~~~~~--a~~~~~d~ilIDTaGr~~~d~~~~~el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~ 148 (211)
T d2qy9a2 80 ---------IFDAIQA--AKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAK 148 (211)
T ss_dssp ---------HHHHHHH--HHHTTCSEEEECCCCCGGGHHHHHHHHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHHHHH
T ss_pred ---------HHHHHHH--HHHcCCCEEEeccCCCccccHHHHHHHHHHHHHHhhhcccCcceeeeehhcccCcchHHHHh
Confidence 1111110 00123578999987654322 12233333333221 234577788888765444333
No 55
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=97.09 E-value=0.0027 Score=51.74 Aligned_cols=38 Identities=11% Similarity=0.292 Sum_probs=26.0
Q ss_pred CccEEEEccchhhhccCcHHHHHHHHhhCCCCceEEEEe
Q 015093 182 YIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220 (413)
Q Consensus 182 ~~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~lS 220 (413)
...++|+||+|.+. ......+.+.+...+....+++.|
T Consensus 115 ~~kviiIde~d~l~-~~~q~~Llk~lE~~~~~~~~il~t 152 (239)
T d1njfa_ 115 RFKVYLIDEVHMLS-RHSFNALLKTLEEPPEHVKFLLAT 152 (239)
T ss_dssp SSEEEEEETGGGSC-HHHHHHHHHHHHSCCTTEEEEEEE
T ss_pred CCEEEEEECcccCC-HHHHHHHHHHHhcCCCCeEEEEEc
Confidence 35799999999873 334556677777666666665544
No 56
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=96.92 E-value=0.0019 Score=53.07 Aligned_cols=90 Identities=19% Similarity=0.141 Sum_probs=68.7
Q ss_pred CCCcEEEEEcCcccHHHHHHHHhh----CCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeC-ccccCCCCCCCCEEE
Q 015093 278 AITQSVIFVNTRRKVDWLTDQMRS----RDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD-LLARGIDVQQVSLVI 352 (413)
Q Consensus 278 ~~~~~lIf~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~-~~~~G~d~~~~~~vi 352 (413)
.+.++++.+|+.--|.+.++.+++ .+..+..+||+++..+|.++.....+|+.+|+|+|- .+...+.+.++..||
T Consensus 131 ~g~q~~~m~Pt~~La~Qh~~~~~~~f~~~~~~v~~l~~~~~~~~r~~~~~~~~~g~~~iiIGThsl~~~~~~f~~Lglvi 210 (264)
T d1gm5a3 131 AGFQTAFMVPTSILAIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQEDVHFKNLGLVI 210 (264)
T ss_dssp HTSCEEEECSCHHHHHHHHHHHHHHHTCSSCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHHHCCCCSCCCEEE
T ss_pred cccceeEEeehHhhhHHHHHHHHHhhhhccccceeeccccchHHHHHHHHHHHCCCCCEEEeehHHhcCCCCccccceee
Confidence 456899999998887776655554 578999999999999999999999999999999996 566678888888888
Q ss_pred EcCCCCChhHHHhhhcc
Q 015093 353 NYDLPTQPENYLHRIGR 369 (413)
Q Consensus 353 ~~~~~~s~~~~~Q~~GR 369 (413)
+-..- .-.+.||.+-
T Consensus 211 iDEqH--~fgv~Qr~~l 225 (264)
T d1gm5a3 211 IDEQH--RFGVKQREAL 225 (264)
T ss_dssp EESCC--CC-----CCC
T ss_pred ecccc--ccchhhHHHH
Confidence 76543 2346676543
No 57
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.91 E-value=0.00084 Score=54.28 Aligned_cols=43 Identities=14% Similarity=0.203 Sum_probs=28.8
Q ss_pred CCccEEEEccchhhhccCcHHHHHHHHhhCCCCceEEEEeeeCC
Q 015093 181 DYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMP 224 (413)
Q Consensus 181 ~~~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~lSAT~~ 224 (413)
....++|+||+|.+... ....+...+...+....+++.+....
T Consensus 100 ~~~kviiiDe~d~~~~~-~~~~ll~~~e~~~~~~~~i~~~~~~~ 142 (224)
T d1sxjb2 100 GKHKIVILDEADSMTAG-AQQALRRTMELYSNSTRFAFACNQSN 142 (224)
T ss_dssp TCCEEEEEESGGGSCHH-HHHTTHHHHHHTTTTEEEEEEESCGG
T ss_pred cceEEEEEecccccchh-HHHHHhhhccccccceeeeeccCchh
Confidence 34579999999987543 34555566677776666666655543
No 58
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=96.89 E-value=0.0028 Score=50.54 Aligned_cols=42 Identities=17% Similarity=0.332 Sum_probs=26.4
Q ss_pred ccEEEEccchhhhcc-CcHHHHHHHHhhCCC-CceEEEEeeeCCh
Q 015093 183 IRMFVLDEADEMLSR-GFKDQIYDIFQHLPG-KIQVGVFSATMPP 225 (413)
Q Consensus 183 ~~~iIiDE~h~~~~~-~~~~~~~~~~~~~~~-~~~~i~lSAT~~~ 225 (413)
.+++++|++|.+... .+...+..++..+.. +.+++ +|+..++
T Consensus 98 ~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~ii-its~~~p 141 (213)
T d1l8qa2 98 VDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQII-LASDRHP 141 (213)
T ss_dssp CSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEE-EEESSCG
T ss_pred ccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEE-EecCCcc
Confidence 689999999988643 344556666665543 44455 5555443
No 59
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=96.74 E-value=0.0045 Score=48.84 Aligned_cols=130 Identities=17% Similarity=0.160 Sum_probs=60.3
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCC
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
++++||||+|||.+..-.+. .+.. ......+|.+.+.-.. -.++++.++..+++.+.............
T Consensus 15 i~lvGptGvGKTTTiAKLA~-~~~~-~g~kV~lit~Dt~R~g--a~eQL~~~a~~l~v~~~~~~~~~~~~~~~------- 83 (211)
T d1j8yf2 15 IMLVGVQGTGKATTAGKLAY-FYKK-KGFKVGLVGADVYRPA--ALEQLQQLGQQIGVPVYGEPGEKDVVGIA------- 83 (211)
T ss_dssp EEEECSCCC----HHHHHHH-HHHH-TTCCEEEEECCCSSHH--HHHHHHHHHHHHTCCEECCTTCCCHHHHH-------
T ss_pred EEEECCCCCCHHHHHHHHHH-HHHH-CCCceEEEEeeccccc--hhHHHHHhccccCcceeecccchhhhHHH-------
Confidence 66799999999988755543 3332 2232445555432221 13445555555565544332222111100
Q ss_pred cEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccC---cHHHHHHHHhhCCCCceEEEEeeeCChhHHHHHH
Q 015093 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG---FKDQIYDIFQHLPGKIQVGVFSATMPPEALEITR 232 (413)
Q Consensus 160 ~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~---~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~~~ 232 (413)
.+.+.. ....+.++|++|=+-+..... ....+.++.....+...++.++|+...+......
T Consensus 84 ----------~~a~~~--~~~~~~d~IlIDTaGr~~~~~~~~~~~el~~~~~~~~~~~~~LVl~a~~~~~~~~~~~ 147 (211)
T d1j8yf2 84 ----------KRGVEK--FLSEKMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLAS 147 (211)
T ss_dssp ----------HHHHHH--HHHTTCSEEEEECCCSCCTTCHHHHHHHHHHHHHHHCCSEEEEEEEGGGGGGHHHHHH
T ss_pred ----------HHHHHH--hhccCCceEEEecCCcCccchhhHHHHHHHHHHhhcCCceEEEEEecccCcchHHHHh
Confidence 000000 001225788888775432221 1234555555555555677889888655444433
No 60
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.71 E-value=0.0013 Score=54.15 Aligned_cols=41 Identities=10% Similarity=0.246 Sum_probs=28.2
Q ss_pred CccEEEEccchhhhccCcHHHHHHHHhhCCCCceEEEEeeeC
Q 015093 182 YIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATM 223 (413)
Q Consensus 182 ~~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~lSAT~ 223 (413)
...++|+||+|.+... ....+.+++...+.++.+++.+-.+
T Consensus 131 ~~~iiiide~d~l~~~-~~~~l~~~~e~~~~~~~~Il~tn~~ 171 (252)
T d1sxje2 131 RYKCVIINEANSLTKD-AQAALRRTMEKYSKNIRLIMVCDSM 171 (252)
T ss_dssp CCEEEEEECTTSSCHH-HHHHHHHHHHHSTTTEEEEEEESCS
T ss_pred CceEEEeccccccccc-cchhhhcccccccccccceeeeccc
Confidence 3579999999987433 4556777788877777666544333
No 61
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.69 E-value=0.0032 Score=49.62 Aligned_cols=23 Identities=30% Similarity=0.250 Sum_probs=17.5
Q ss_pred CCcEEEeCCCCCchhHHHHHHHH
Q 015093 77 GLDVIQQAQSGTGKTATFCSGIL 99 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~~~~i~ 99 (413)
++-++++||||+|||.+..-.+.
T Consensus 6 ~~vi~lvGptGvGKTTTiaKLA~ 28 (207)
T d1okkd2 6 GRVVLVVGVNGVGKTTTIAKLGR 28 (207)
T ss_dssp SSEEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHH
Confidence 34478899999999988765543
No 62
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=96.69 E-value=0.0078 Score=48.22 Aligned_cols=88 Identities=18% Similarity=0.182 Sum_probs=71.4
Q ss_pred CCCcEEEEEcCcccHHHHHHHHhh----CCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeC-ccccCCCCCCCCEEE
Q 015093 278 AITQSVIFVNTRRKVDWLTDQMRS----RDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD-LLARGIDVQQVSLVI 352 (413)
Q Consensus 278 ~~~~~lIf~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~-~~~~G~d~~~~~~vi 352 (413)
.+..+++.+|+.-.+.+.++.+++ .+.++..+|+..+..+|.++...+.+|+.+|+|.|- .+...+.++++..||
T Consensus 103 ~g~qv~~l~Pt~~La~Q~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~~~iviGths~l~~~~~f~~LgLiI 182 (233)
T d2eyqa3 103 NHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLI 182 (233)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHHSTTTTCCEEEESTTSCHHHHHHHHHHHHTTCCSEEEECTHHHHSCCCCSSEEEEE
T ss_pred cCCceEEEccHHHhHHHHHHHHHHHHhhCCCEEEeccCcccchhHHHHHHHHhCCCCCEEEeehhhhccCCcccccccee
Confidence 556899999999999998888875 467889999999999999999999999999999997 555578888888887
Q ss_pred EcCCCCChhHHHhhh
Q 015093 353 NYDLPTQPENYLHRI 367 (413)
Q Consensus 353 ~~~~~~s~~~~~Q~~ 367 (413)
....- -..|.|+.
T Consensus 183 iDEeH--~fg~kQ~~ 195 (233)
T d2eyqa3 183 VDEEH--RFGVRHKE 195 (233)
T ss_dssp EESGG--GSCHHHHH
T ss_pred eechh--hhhhHHHH
Confidence 65542 12344554
No 63
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.65 E-value=0.0033 Score=50.68 Aligned_cols=41 Identities=17% Similarity=0.331 Sum_probs=27.1
Q ss_pred CCCCccEEEEccchhhhccCcHHHHHHHHhhCCCCceEEEEe
Q 015093 179 RPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFS 220 (413)
Q Consensus 179 ~~~~~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~lS 220 (413)
......++|+||+|.+... ....+.+++...+....+++.+
T Consensus 96 ~~~~~kiiiiDe~d~~~~~-~~~~Ll~~le~~~~~~~~~~~~ 136 (227)
T d1sxjc2 96 FSKGFKLIILDEADAMTNA-AQNALRRVIERYTKNTRFCVLA 136 (227)
T ss_dssp SSCSCEEEEETTGGGSCHH-HHHHHHHHHHHTTTTEEEEEEE
T ss_pred cCCCeEEEEEeccccchhh-HHHHHHHHhhhcccceeecccc
Confidence 3344579999999987433 4566677777776665555443
No 64
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=96.64 E-value=0.0014 Score=57.69 Aligned_cols=66 Identities=26% Similarity=0.364 Sum_probs=48.4
Q ss_pred CCcHHHHhhhhhhhC----C-CcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhc
Q 015093 62 KPSAIQQRGIVPFCK----G-LDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD 133 (413)
Q Consensus 62 ~~~~~Q~~~~~~~~~----~-~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~ 133 (413)
.|.--|=++++.+.+ | +..++.|-||||||++.. .++... +..+|||+|+..+|.|++++++.+..
T Consensus 11 ~p~gDQP~aI~~l~~~l~~g~~~q~l~GltGS~ka~~iA-~l~~~~-----~rp~LVVt~n~~~A~qL~~dL~~~l~ 81 (413)
T d1t5la1 11 EPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTIS-NVIAQV-----NKPTLVIAHNKTLAGQLYSELKEFFP 81 (413)
T ss_dssp CCCTTHHHHHHHHHHHHHHTCSEEEEEECTTSCHHHHHH-HHHHHH-----TCCEEEECSSHHHHHHHHHHHHHHCT
T ss_pred CCCCCCHHHHHHHHHHHhcCCCcEEEeCCCCcHHHHHHH-HHHHHh-----CCCEEEEeCCHHHHHHHHHHHHHHcC
Confidence 455566666655544 4 458899999999997652 232221 33799999999999999999999864
No 65
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=96.60 E-value=0.013 Score=47.72 Aligned_cols=54 Identities=19% Similarity=0.172 Sum_probs=29.2
Q ss_pred cccCccCCCCCHHHHHHHHhCC--CCCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHH
Q 015093 38 VYDSFDSMGLKENLLRGIYAYG--FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 38 ~~~~~~~~~l~~~~~~~l~~~~--~~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~ 94 (413)
+..+|++++--+...+.+...= +..+..++... ....+.+|+.||+|+|||..+
T Consensus 4 p~~~~~di~G~~~~k~~l~~~i~~l~~~~~~~~~g---~~~~~giLl~GppGtGKT~la 59 (247)
T d1ixza_ 4 PKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMG---ARIPKGVLLVGPPGVGKTHLA 59 (247)
T ss_dssp CSCCGGGCCSCHHHHHHHHHHHHHHHCHHHHHHTT---CCCCSEEEEECCTTSSHHHHH
T ss_pred CCCcHHHHccHHHHHHHHHHHHHHHHCHHHHHHcC---CCCCceEEEecCCCCChhHHH
Confidence 3356777765555555554310 00111122111 112356999999999999776
No 66
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=96.45 E-value=0.011 Score=43.08 Aligned_cols=87 Identities=18% Similarity=0.194 Sum_probs=52.2
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCC
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
-++.||+.||||.-.+..+... . ..+.+++++.|...-. ... .+ ..+.+.. ..
T Consensus 5 ~~i~GpMfsGKTteLi~~~~~~-~--~~~~kv~~ikp~~D~R---------~~~----~i-~s~~g~~----------~~ 57 (139)
T d2b8ta1 5 EFITGPMFAGKTAELIRRLHRL-E--YADVKYLVFKPKIDTR---------SIR----NI-QSRTGTS----------LP 57 (139)
T ss_dssp EEEECSTTSCHHHHHHHHHHHH-H--HTTCCEEEEEECCCGG---------GCS----SC-CCCCCCS----------SC
T ss_pred EEEEccccCHHHHHHHHHHHHH-H--HCCCcEEEEEEccccc---------ccc----eE-EcccCce----------ee
Confidence 4789999999997654443322 2 2244899999986521 111 11 1111111 13
Q ss_pred cEEEeChHHHHHHHHcCCCCCCCccEEEEccchhh
Q 015093 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEM 194 (413)
Q Consensus 160 ~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~ 194 (413)
.+.+.+...+...+..... ...+++|.+||+|.+
T Consensus 58 ~~~~~~~~~~~~~~~~~~~-~~~~dvI~IDE~QFf 91 (139)
T d2b8ta1 58 SVEVESAPEILNYIMSNSF-NDETKVIGIDEVQFF 91 (139)
T ss_dssp CEEESSTHHHHHHHHSTTS-CTTCCEEEECSGGGS
T ss_pred eEEeccchhhHHHHHhhcc-ccCcCEEEechhhhc
Confidence 4666666666666655443 345789999999976
No 67
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.44 E-value=0.01 Score=46.82 Aligned_cols=59 Identities=22% Similarity=0.217 Sum_probs=33.4
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEE
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHAC 142 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~ 142 (413)
++++||||+|||.+..-.+. .+...+ ....++-+.+.-.. ..++++.++..+++.+...
T Consensus 14 i~lvGptGvGKTTTiAKLAa-~~~~~~-~kV~lit~Dt~R~g--A~eQL~~~a~~l~i~~~~~ 72 (213)
T d1vmaa2 14 IMVVGVNGTGKTTSCGKLAK-MFVDEG-KSVVLAAADTFRAA--AIEQLKIWGERVGATVISH 72 (213)
T ss_dssp EEEECCTTSSHHHHHHHHHH-HHHHTT-CCEEEEEECTTCHH--HHHHHHHHHHHHTCEEECC
T ss_pred EEEECCCCCCHHHHHHHHHH-HHHHCC-CceEEEeecccccc--hhHHHHHHhhhcCcccccc
Confidence 67799999999988655443 333322 33455555543222 2344555555556655443
No 68
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.40 E-value=0.0059 Score=49.26 Aligned_cols=43 Identities=16% Similarity=0.281 Sum_probs=28.2
Q ss_pred cCccCCCCCHHHHHHHHhCCCCCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHHH
Q 015093 40 DSFDSMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 40 ~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~~ 95 (413)
.+|+++-..+...+.+... +.. -+..++++.||+|+|||..+-
T Consensus 21 ~~~~diig~~~~~~~l~~~------------i~~-~~~~~lll~Gp~G~GKTtla~ 63 (231)
T d1iqpa2 21 QRLDDIVGQEHIVKRLKHY------------VKT-GSMPHLLFAGPPGVGKTTAAL 63 (231)
T ss_dssp CSTTTCCSCHHHHHHHHHH------------HHH-TCCCEEEEESCTTSSHHHHHH
T ss_pred CCHHHccCcHHHHHHHHHH------------HHc-CCCCeEEEECCCCCcHHHHHH
Confidence 3577776677776666532 110 012458999999999997763
No 69
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.32 E-value=0.0098 Score=48.01 Aligned_cols=41 Identities=17% Similarity=0.337 Sum_probs=25.9
Q ss_pred ccEEEEccchhhhccCcHHHHHHHHhhCCCCceEEEEeeeCC
Q 015093 183 IRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMP 224 (413)
Q Consensus 183 ~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~lSAT~~ 224 (413)
..++|+||+|.+... ....+..++...+....++..+....
T Consensus 109 ~~viiiDe~d~l~~~-~~~~l~~~~~~~~~~~~~i~~~~~~~ 149 (237)
T d1sxjd2 109 YKIIILDEADSMTAD-AQSALRRTMETYSGVTRFCLICNYVT 149 (237)
T ss_dssp CEEEEETTGGGSCHH-HHHHHHHHHHHTTTTEEEEEEESCGG
T ss_pred ceEEEEecccccCHH-HHHHHhhccccccccccccccccccc
Confidence 568999999987543 34455566666665665554444443
No 70
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=96.18 E-value=0.0056 Score=44.85 Aligned_cols=37 Identities=14% Similarity=0.144 Sum_probs=24.9
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHH
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRE 119 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~ 119 (413)
-++.||+.||||.-.+..+.. .. ..+.+++++.|...
T Consensus 10 ~lI~GpMfSGKTteLi~~~~~-~~--~~g~~vl~i~~~~D 46 (141)
T d1xx6a1 10 EVIVGPMYSGKSEELIRRIRR-AK--IAKQKIQVFKPEID 46 (141)
T ss_dssp EEEECSTTSSHHHHHHHHHHH-HH--HTTCCEEEEEEC--
T ss_pred EEEEeccccHHHHHHHHHHHH-hh--hcCCcEEEEEeccc
Confidence 688999999999765444432 22 22448999999865
No 71
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.05 E-value=0.0066 Score=44.03 Aligned_cols=37 Identities=14% Similarity=0.188 Sum_probs=25.4
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHH
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRE 119 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~ 119 (413)
-++.||+.||||.-.+..+... .. .+.+++++.|...
T Consensus 5 ~li~GpMfsGKTt~Li~~~~~~-~~--~g~~v~~ikp~~D 41 (133)
T d1xbta1 5 QVILGPMFSGKSTELMRRVRRF-QI--AQYKCLVIKYAKD 41 (133)
T ss_dssp EEEECCTTSCHHHHHHHHHHHH-HT--TTCCEEEEEETTC
T ss_pred EEEEecccCHHHHHHHHHHHHH-HH--cCCcEEEEecccc
Confidence 5889999999997654433322 22 2447999998765
No 72
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.82 E-value=0.015 Score=47.58 Aligned_cols=18 Identities=28% Similarity=0.314 Sum_probs=15.4
Q ss_pred CCcEEEeCCCCCchhHHH
Q 015093 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~ 94 (413)
.+.+|+.||+|+|||..+
T Consensus 38 ~~giLL~GppGtGKT~l~ 55 (258)
T d1e32a2 38 PRGILLYGPPGTGKTLIA 55 (258)
T ss_dssp CCEEEEECCTTSSHHHHH
T ss_pred CceeEEecCCCCCchHHH
Confidence 466999999999999764
No 73
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=95.79 E-value=0.01 Score=46.29 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=71.8
Q ss_pred ceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHH----hcCCcEEEeChHHHHHHHHcCCCCCCCc
Q 015093 108 QCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL----SAGVHVVVGTPGRVFDMLRRQSLRPDYI 183 (413)
Q Consensus 108 ~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Iii~T~~~l~~~~~~~~~~~~~~ 183 (413)
+.++.||||...-.....+.+++... +.++..++|........... ....+|+|+|. +-+.+.+..+.
T Consensus 31 GgQvy~V~p~I~~~e~~~~~l~~~~p--~~~i~~lHGkm~~~eke~im~~F~~g~~~ILv~Tt------vIEvGiDvpnA 102 (211)
T d2eyqa5 31 GGQVYYLYNDVENIQKAAERLAELVP--EARIAIGHGQMRERELERVMNDFHHQRFNVLVCTT------IIETGIDIPTA 102 (211)
T ss_dssp TCEEEEECCCSSCHHHHHHHHHHHCT--TSCEEECCSSCCHHHHHHHHHHHHTTSCCEEEESS------TTGGGSCCTTE
T ss_pred CCeEEEEEcCccchhhHHHHHHHhCC--ceEEEEEEeccCHHHHHHHHHHHHcCCcceEEEeh------hhhhccCCCCC
Confidence 45999999999888888888888765 66899999988766554443 45789999993 33456778888
Q ss_pred cEEEEccchhhhccCcHHHHHHHHhhCCC---CceEEEEe
Q 015093 184 RMFVLDEADEMLSRGFKDQIYDIFQHLPG---KIQVGVFS 220 (413)
Q Consensus 184 ~~iIiDE~h~~~~~~~~~~~~~~~~~~~~---~~~~i~lS 220 (413)
.++|+..|+++ -..++.-+.-+... ....++++
T Consensus 103 ~~iiI~~a~rf----GLaQLhQLRGRVGR~~~~s~c~l~~ 138 (211)
T d2eyqa5 103 NTIIIERADHF----GLAQLHQLRGRVGRSHHQAYAWLLT 138 (211)
T ss_dssp EEEEETTTTSS----CHHHHHHHHTTCCBTTBCEEEEEEE
T ss_pred cEEEEecchhc----cccccccccceeeecCccceEEEEe
Confidence 99999999986 23344444444322 23455555
No 74
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=95.63 E-value=0.075 Score=43.13 Aligned_cols=55 Identities=20% Similarity=0.201 Sum_probs=29.6
Q ss_pred ccccCccCCCCCHHHHHHHHhC--CCCCCcHHHHhhhhhhhCCCcEEEeCCCCCchhHHH
Q 015093 37 EVYDSFDSMGLKENLLRGIYAY--GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~l~~~--~~~~~~~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~~ 94 (413)
++..+|++.+-.+...+.+.+. .+..+..+|... +...+.+++.||+|+|||..+
T Consensus 6 ~~~~t~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g---~~~~~~iLL~GppGtGKT~la 62 (256)
T d1lv7a_ 6 QIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLG---GKIPKGVLMVGPPGTGKTLLA 62 (256)
T ss_dssp SSCCCGGGSCSCHHHHHHTHHHHHHHHCGGGC--------CCCCEEEEECCTTSCHHHHH
T ss_pred CCCCCHHHHhchHHHHHHHHHHHHHHHCHHHHHHcC---CCCCCeEEeeCCCCCCccHHH
Confidence 3445667766666665555431 011111122111 122466999999999999875
No 75
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=95.12 E-value=0.013 Score=49.76 Aligned_cols=52 Identities=21% Similarity=0.267 Sum_probs=34.5
Q ss_pred HHHHhhhhhh-hCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHH
Q 015093 65 AIQQRGIVPF-CKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTREL 120 (413)
Q Consensus 65 ~~Q~~~~~~~-~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l 120 (413)
+-+...+..+ ..+++++|+|+||||||... .+++..+.. ..+++.+-.+.++
T Consensus 153 ~~~~~~l~~~v~~~~nili~G~tgSGKTT~l-~al~~~i~~---~~rivtiEd~~El 205 (323)
T d1g6oa_ 153 EQAISAIKDGIAIGKNVIVCGGTGSGKTTYI-KSIMEFIPK---EERIISIEDTEEI 205 (323)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESTTSSHHHHH-HHHGGGSCT---TCCEEEEESSCCC
T ss_pred HHHHHHHHHHHHhCCCEEEEeeccccchHHH-HHHhhhccc---ccceeeccchhhh
Confidence 4444455443 44788999999999999763 455444432 3478888777665
No 76
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=94.96 E-value=0.022 Score=49.88 Aligned_cols=67 Identities=34% Similarity=0.452 Sum_probs=48.3
Q ss_pred CCCcHHHHhhhhhhh----CCCc-EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhc
Q 015093 61 EKPSAIQQRGIVPFC----KGLD-VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGD 133 (413)
Q Consensus 61 ~~~~~~Q~~~~~~~~----~~~~-~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~ 133 (413)
+.|+.-|-+++..+. .|.. ..+.|.+||+|+++.. .+.... +..+|||||+...+.++++.++.+..
T Consensus 7 ~~p~~dqp~aI~~l~~~L~~g~~~~~L~GlsgS~ka~~~A-~l~~~~-----~rp~LvVt~~~~~A~~l~~dL~~~l~ 78 (408)
T d1c4oa1 7 PSPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMA-KVIEAL-----GRPALVLAPNKILAAQLAAEFRELFP 78 (408)
T ss_dssp CCCCTTHHHHHHHHHHHHHTTCSEEEEEECTTSCHHHHHH-HHHHHH-----TCCEEEEESSHHHHHHHHHHHHHHCT
T ss_pred CCCCCCCHHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHH-HHHHHh-----CCCEEEEeCCHHHHHHHHHHHHHhcC
Confidence 356666766666543 4544 7889999999996542 222221 23799999999999999999999864
No 77
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=94.94 E-value=0.015 Score=50.98 Aligned_cols=38 Identities=24% Similarity=0.323 Sum_probs=24.7
Q ss_pred HHHHhhhhhhhCCC--cEEEeCCCCCchhHHHHHHHHHhcc
Q 015093 65 AIQQRGIVPFCKGL--DVIQQAQSGTGKTATFCSGILQQLD 103 (413)
Q Consensus 65 ~~Q~~~~~~~~~~~--~~lv~~~tGsGKT~~~~~~i~~~l~ 103 (413)
+.|...+..+.... -+|+.||||||||.+. ..+++.+.
T Consensus 144 ~~~~~~l~~l~~~~~GliLvtGpTGSGKSTTl-~~~l~~~~ 183 (401)
T d1p9ra_ 144 AHNHDNFRRLIKRPHGIILVTGPTGSGKSTTL-YAGLQELN 183 (401)
T ss_dssp HHHHHHHHHHHTSSSEEEEEECSTTSCHHHHH-HHHHHHHC
T ss_pred HHHHHHHHHHHhhhhceEEEEcCCCCCccHHH-HHHhhhhc
Confidence 44444454554433 3899999999999774 45555553
No 78
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=94.59 E-value=0.016 Score=50.07 Aligned_cols=17 Identities=24% Similarity=0.405 Sum_probs=15.3
Q ss_pred CcEEEeCCCCCchhHHH
Q 015093 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~ 94 (413)
.++|..||||.|||..+
T Consensus 69 ~niLfiGPTGvGKTElA 85 (364)
T d1um8a_ 69 SNILLIGPTGSGKTLMA 85 (364)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred cceeeeCCCCccHHHHH
Confidence 56999999999999876
No 79
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.25 E-value=0.015 Score=44.53 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=24.0
Q ss_pred CcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcc
Q 015093 78 LDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAP 116 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P 116 (413)
++++|.||+|+|||... ..+...+...... ..++.++
T Consensus 2 k~v~ItG~~GtGKTtl~-~~i~~~l~~~~~~-v~~~~~~ 38 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLI-HKASEVLKSSGVP-VDGFYTE 38 (189)
T ss_dssp CCEEEESCCSSCHHHHH-HHHHHHHHHTTCC-CEEEECC
T ss_pred cEEEEECCCCCcHHHHH-HHHHHHHHHCCCE-EEEEEec
Confidence 67999999999999754 4555555444322 3344444
No 80
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=94.19 E-value=0.018 Score=48.63 Aligned_cols=18 Identities=22% Similarity=0.359 Sum_probs=16.1
Q ss_pred CCcEEEeCCCCCchhHHH
Q 015093 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~ 94 (413)
.+++++.||||+|||..+
T Consensus 49 ~~~iLl~GPpG~GKT~lA 66 (309)
T d1ofha_ 49 PKNILMIGPTGVGKTEIA 66 (309)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred CceEEEECCCCCCHHHHH
Confidence 577999999999999876
No 81
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=93.88 E-value=0.038 Score=45.28 Aligned_cols=26 Identities=23% Similarity=0.267 Sum_probs=19.3
Q ss_pred CcEEEeCCCCCchhHHHHHHHHHhccc
Q 015093 78 LDVIQQAQSGTGKTATFCSGILQQLDY 104 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~~~~i~~~l~~ 104 (413)
.++++.||+|+|||.++ -.+...+..
T Consensus 44 ~~lll~GppGtGKT~l~-~~l~~~l~~ 69 (276)
T d1fnna2 44 PRATLLGRPGTGKTVTL-RKLWELYKD 69 (276)
T ss_dssp CEEEEECCTTSSHHHHH-HHHHHHHTT
T ss_pred CceEEECCCCCCHHHHH-HHHHHHHhc
Confidence 57999999999999765 445555543
No 82
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=93.80 E-value=0.9 Score=33.86 Aligned_cols=105 Identities=15% Similarity=0.096 Sum_probs=71.7
Q ss_pred ceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHH----hcCCcEEEeChHHHHHHHHcCCCCCCCc
Q 015093 108 QCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL----SAGVHVVVGTPGRVFDMLRRQSLRPDYI 183 (413)
Q Consensus 108 ~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Iii~T~~~l~~~~~~~~~~~~~~ 183 (413)
+.++||.|+++.-++...+.+.+. ++++..++|+.........+ .+..+|+|+|. +...+++..++
T Consensus 31 g~r~lvfc~t~~~~~~l~~~L~~~----Gi~a~~~Hg~~~~~eR~~~l~~F~~G~~~vLVaT~------v~~~GiDip~V 100 (174)
T d1c4oa2 31 GERTLVTVLTVRMAEELTSFLVEH----GIRARYLHHELDAFKRQALIRDLRLGHYDCLVGIN------LLREGLDIPEV 100 (174)
T ss_dssp TCEEEEECSSHHHHHHHHHHHHHT----TCCEEEECTTCCHHHHHHHHHHHHTTSCSEEEESC------CCCTTCCCTTE
T ss_pred CCcEEEEEcchhHHHHHHHHHHhc----CCceEEEecccchHHHHHHHHHHHCCCeEEEEeee------eeeeeccCCCC
Confidence 558999999999998888877774 88999999998876655443 45789999992 44567888889
Q ss_pred cEEEEccchhhhcc-CcHHHHHHHHhhCCCCceEEEEeee
Q 015093 184 RMFVLDEADEMLSR-GFKDQIYDIFQHLPGKIQVGVFSAT 222 (413)
Q Consensus 184 ~~iIiDE~h~~~~~-~~~~~~~~~~~~~~~~~~~i~lSAT 222 (413)
++||+=.++..... +....+..+-+..+...-.+++-+.
T Consensus 101 ~~Vi~~~~~~~~~~~~~~~~iq~~GR~gR~~~g~~~~~~~ 140 (174)
T d1c4oa2 101 SLVAILDADKEGFLRSERSLIQTIGRAARNARGEVWLYAD 140 (174)
T ss_dssp EEEEETTTTSCSGGGSHHHHHHHHGGGTTSTTCEEEEECS
T ss_pred cEEEEeccccccccchhHHHHHHhhhhhhcCCCeeEEeec
Confidence 99998777653221 2233445554444443333333333
No 83
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=93.51 E-value=0.1 Score=40.03 Aligned_cols=114 Identities=12% Similarity=0.108 Sum_probs=61.5
Q ss_pred CcEEEeCCCCCchhHHHHHHHHHhcccc----cCceeEEEEcccHHHH------HHHHHHHHHhhccc---CceEEEEEC
Q 015093 78 LDVIQQAQSGTGKTATFCSGILQQLDYE----SLQCQALVLAPTRELA------QQIEKVMRALGDYM---GVKVHACVG 144 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~~~~i~~~l~~~----~~~~~~lvl~P~~~l~------~q~~~~~~~~~~~~---~~~~~~~~~ 144 (413)
++++++||+|.|||...--.+. .+..+ ....+-+|-.....|. .+|.+.++.+.... ..++.++.+
T Consensus 44 ~n~lLvG~pGVGKTalv~~LA~-ri~~~~vp~~L~~~~i~~ld~~~LiAg~~~rG~~E~rl~~il~e~~~~~~~iILfID 122 (195)
T d1jbka_ 44 NNPVLIGEPGVGKTAIVEGLAQ-RIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFID 122 (195)
T ss_dssp CEEEEECCTTSCHHHHHHHHHH-HHHHTCSCGGGTTCEEEEECHHHHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEEEEE
T ss_pred CCeEEEecCCcccHHHHHHHHH-HHHhCCCCHHHcCceEEEeeHHHHhccCCccHHHHHHHHHHHHHHhcCCCcEEEEcc
Confidence 5699999999999976533332 23221 1112345555555554 36666666554332 223333332
Q ss_pred Cc-------------chHHHH-HHHh-cCCc-EEEeChHHHHHHHHcCCCCCCCccEEEEccch
Q 015093 145 GT-------------SVREDQ-RILS-AGVH-VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEAD 192 (413)
Q Consensus 145 ~~-------------~~~~~~-~~~~-~~~~-Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h 192 (413)
+. +..... ..+. .... |--+||+.+...++......+.+..|-++|-.
T Consensus 123 eih~l~~~g~~~g~~d~~~~Lkp~L~rg~l~~IgatT~eey~~~~e~d~aL~rrF~~I~V~Ep~ 186 (195)
T d1jbka_ 123 ELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 186 (195)
T ss_dssp TGGGGTT------CCCCHHHHHHHHHTTSCCEEEEECHHHHHHHTTTCHHHHTTEEEEECCCCC
T ss_pred hHHHHhcCCCCCCcccHHHHHHHHHhCCCceEEecCCHHHHHHHHHcCHHHHhcCCEeecCCCC
Confidence 11 111111 1111 2233 44578888888877766556667888888865
No 84
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=93.25 E-value=0.079 Score=47.38 Aligned_cols=55 Identities=24% Similarity=0.172 Sum_probs=40.1
Q ss_pred CCcEEEeCCCCCchhHHHHHHHHHhccccc---------CceeEEEEcccHHHHHHHHHHHHHh
Q 015093 77 GLDVIQQAQSGTGKTATFCSGILQQLDYES---------LQCQALVLAPTRELAQQIEKVMRAL 131 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~---------~~~~~lvl~P~~~l~~q~~~~~~~~ 131 (413)
.+..||.|+.|||||.+...-++..+.... .-..+|+|+=|+.-+.++.+++...
T Consensus 16 ~g~~lv~A~AGsGKT~~l~~r~~~ll~~~~~~~~~~~~~~~~~IL~lTFT~kAA~Emk~RI~~~ 79 (485)
T d1w36b1 16 QGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSN 79 (485)
T ss_dssp SSCEEEECCTTSCHHHHHHHHHHHHHTTCSSSSSCSSCCCGGGEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCchHHHHHHHHHHHHHHhhCcccccccCCCCcccEeEeccHHHHHHHHHHHHHHH
Confidence 456999999999999887766666654321 1135889988888888887777554
No 85
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=92.73 E-value=1.4 Score=33.02 Aligned_cols=104 Identities=20% Similarity=0.202 Sum_probs=72.1
Q ss_pred ceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHH----hcCCcEEEeChHHHHHHHHcCCCCCCCc
Q 015093 108 QCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL----SAGVHVVVGTPGRVFDMLRRQSLRPDYI 183 (413)
Q Consensus 108 ~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Iii~T~~~l~~~~~~~~~~~~~~ 183 (413)
+.+++|.|+++.-++.....++.. +.++..++|+.+.......+ .+..+|+|+|. +...+++..++
T Consensus 31 ~~~~iif~~~~~~~~~~~~~l~~~----g~~~~~~hg~~~~~eR~~~l~~Fr~g~~~vLVaTd------v~~rGiDip~v 100 (181)
T d1t5la2 31 NERTLVTTLTKKMAEDLTDYLKEA----GIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVGIN------LLREGLDIPEV 100 (181)
T ss_dssp TCEEEEECSSHHHHHHHHHHHHTT----TCCEEEECSSCCHHHHHHHHHHHHHTSCSEEEESC------CCSSSCCCTTE
T ss_pred CCeEEEEeehhhhhHHHHHHHHhC----CcceeEecCCccHHHHHHHHHHHHCCCCCEEEehh------HHHccCCCCCC
Confidence 348999999999888777766654 88999999998876655443 45789999992 44567888889
Q ss_pred cEEEEccchhhh-ccCcHHHHHHHHhhCCCCceEEEEee
Q 015093 184 RMFVLDEADEML-SRGFKDQIYDIFQHLPGKIQVGVFSA 221 (413)
Q Consensus 184 ~~iIiDE~h~~~-~~~~~~~~~~~~~~~~~~~~~i~lSA 221 (413)
++||.-++.... ..+....+.++-+..+.+...+++..
T Consensus 101 ~~VI~~d~p~~~~~~s~~~yi~R~GRagR~g~~~~~~~~ 139 (181)
T d1t5la2 101 SLVAILDADKEGFLRSERSLIQTIGRAARNANGHVIMYA 139 (181)
T ss_dssp EEEEETTTTSCSGGGSHHHHHHHHGGGTTSTTCEEEEEC
T ss_pred CEEEEecCCcccccccHHHHHHHHHhhccccCceeEeec
Confidence 999988877532 12344445566555554433444433
No 86
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=92.67 E-value=0.024 Score=50.21 Aligned_cols=18 Identities=22% Similarity=0.359 Sum_probs=16.1
Q ss_pred CCcEEEeCCCCCchhHHH
Q 015093 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~ 94 (413)
.+|+|+.||||+|||+.+
T Consensus 49 ksNILliGPTGvGKTlLA 66 (443)
T d1g41a_ 49 PKNILMIGPTGVGKTEIA 66 (443)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred cccEEEECCCCCCHHHHH
Confidence 468999999999999876
No 87
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.64 E-value=0.34 Score=35.96 Aligned_cols=74 Identities=16% Similarity=0.255 Sum_probs=56.3
Q ss_pred ceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHH----hcCCcEEEeChHHHHHHHHcCCCCCCCc
Q 015093 108 QCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL----SAGVHVVVGTPGRVFDMLRRQSLRPDYI 183 (413)
Q Consensus 108 ~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Iii~T~~~l~~~~~~~~~~~~~~ 183 (413)
..+++|.|.++.-+++..+.+... +..+..++|+.......... .....|+|+|. +...+++..++
T Consensus 27 ~~k~iIF~~s~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~r~~~l~~f~~~~~~iLv~Td------v~~rGiDi~~v 96 (162)
T d1fuka_ 27 VTQAVIFCNTRRKVEELTTKLRND----KFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTD------LLARGIDVQQV 96 (162)
T ss_dssp CSCEEEEESSHHHHHHHHHHHHHT----TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEEEG------GGTTTCCCCSC
T ss_pred CCcEEEEEEEEchHHHHHHHHhhc----CceEEEeccCCchhhHHHHHHHHhhcccceeeccc------cccccccCCCc
Confidence 448999999999999888877664 77888999988776655443 35678999994 33567788888
Q ss_pred cEEEEccc
Q 015093 184 RMFVLDEA 191 (413)
Q Consensus 184 ~~iIiDE~ 191 (413)
++||.=+.
T Consensus 97 ~~VI~~d~ 104 (162)
T d1fuka_ 97 SLVINYDL 104 (162)
T ss_dssp SEEEESSC
T ss_pred eEEEEecc
Confidence 88887554
No 88
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=92.29 E-value=0.034 Score=42.09 Aligned_cols=19 Identities=21% Similarity=0.372 Sum_probs=15.7
Q ss_pred CCCcEEEeCCCCCchhHHH
Q 015093 76 KGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 76 ~~~~~lv~~~tGsGKT~~~ 94 (413)
.|+-+++.||+|||||.++
T Consensus 3 ~g~iI~l~G~~GsGKSTia 21 (176)
T d1zp6a1 3 GGNILLLSGHPGSGKSTIA 21 (176)
T ss_dssp TTEEEEEEECTTSCHHHHH
T ss_pred CCeEEEEECCCCCCHHHHH
Confidence 3555889999999999875
No 89
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=92.20 E-value=0.41 Score=35.09 Aligned_cols=137 Identities=17% Similarity=0.155 Sum_probs=68.1
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCC
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGV 159 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
+.|.-..|-|||.+++-.++..+-. +.+++++-=.+.-... .+. ......+........+.............
T Consensus 5 i~vytG~GKGKTTAAlG~alRA~G~---G~rV~ivQFlKg~~~~--ge~-~~~~~~~~~~~~~~~~~~~~~~~~e~~~~- 77 (157)
T d1g5ta_ 5 IIVFTGNGKGKTTAAFGTAARAVGH---GKNVGVVQFIKGTWPN--GER-NLLEPHGVEFQVMATGFTWETQNREADTA- 77 (157)
T ss_dssp EEEEESSSSCHHHHHHHHHHHHHHT---TCCEEEEESSCCSSCC--HHH-HHHGGGTCEEEECCTTCCCCGGGHHHHHH-
T ss_pred EEEEeCCCCCcHHHHHHHHHHHhcC---CCEEEEEEEecCCccc--chh-hhhcccCcEEEEecCCCcccCCChHHHHH-
Confidence 6677788999999998777776544 3477776433211000 011 11112233332222111100000000000
Q ss_pred cEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccC--cHHHHHHHHhhCCCCceEEEEeeeCChhHHH
Q 015093 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRG--FKDQIYDIFQHLPGKIQVGVFSATMPPEALE 229 (413)
Q Consensus 160 ~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~--~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~ 229 (413)
.......... .......+++||+||+-...+.+ -...+..++...|....+|+..-.+++++.+
T Consensus 78 -----~a~~~~~~a~-~~~~~~~~dllILDEi~~Ai~~gli~~~~v~~ll~~rp~~~evVlTGr~~p~~L~e 143 (157)
T d1g5ta_ 78 -----ACMAVWQHGK-RMLADPLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGCHRDILD 143 (157)
T ss_dssp -----HHHHHHHHHH-HHTTCTTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTTCEEEEECSSCCHHHHH
T ss_pred -----HHHHHHHHHH-HHhhcCccCEEeHHHHHHHHHcCCCCHHHHHHHHHhCCCCCEEEEECCCCCHHHHH
Confidence 0011111111 11233447999999999876655 3466777888888888777544445554443
No 90
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=92.16 E-value=0.045 Score=40.77 Aligned_cols=19 Identities=16% Similarity=0.176 Sum_probs=16.0
Q ss_pred CCcEEEeCCCCCchhHHHH
Q 015093 77 GLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~~ 95 (413)
.+++++.||+|+|||.++-
T Consensus 2 ~k~I~l~G~~GsGKSTvak 20 (169)
T d1kaga_ 2 KRNIFLVGPMGAGKSTIGR 20 (169)
T ss_dssp CCCEEEECCTTSCHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHH
Confidence 4578999999999998763
No 91
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=91.58 E-value=0.068 Score=42.89 Aligned_cols=50 Identities=16% Similarity=0.154 Sum_probs=31.5
Q ss_pred CCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHH
Q 015093 77 GLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRA 130 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~ 130 (413)
|.-++|.|++|+|||..++..+.+.... +.++++++-... ..+..+.+..
T Consensus 26 gsl~li~G~pGsGKT~l~~qia~~~~~~---~~~~~~is~e~~-~~~~~~~~~~ 75 (242)
T d1tf7a2 26 DSIILATGATGTGKTLLVSRFVENACAN---KERAILFAYEES-RAQLLRNAYS 75 (242)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHHHTT---TCCEEEEESSSC-HHHHHHHHHT
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHh---ccccceeeccCC-HHHHHHHHHH
Confidence 4569999999999998876666654433 336777764322 3334444443
No 92
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=91.32 E-value=0.085 Score=46.59 Aligned_cols=44 Identities=14% Similarity=0.225 Sum_probs=29.3
Q ss_pred hCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHH
Q 015093 75 CKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELA 121 (413)
Q Consensus 75 ~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~ 121 (413)
...++++|.|+||||||......+.+.+.. +..++|+=|.-++.
T Consensus 48 ~~~~H~~I~G~tGsGKT~~l~~li~~~~~~---g~~~iiiD~kge~~ 91 (433)
T d1e9ra_ 48 AEPRHLLVNGATGTGKSVLLRELAYTGLLR---GDRMVIVDPNGDML 91 (433)
T ss_dssp GGGGCEEEEECTTSSHHHHHHHHHHHHHHT---TCEEEEEEETTHHH
T ss_pred cccceEEEEeCCCCcHHHHHHHHHHHHHhC---CCCEEEEeCChhHH
Confidence 345789999999999997653334333322 33677777766543
No 93
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=91.13 E-value=0.044 Score=40.34 Aligned_cols=15 Identities=20% Similarity=0.373 Sum_probs=13.2
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|++|||||..+
T Consensus 5 Iii~G~pGsGKTTla 19 (152)
T d1ly1a_ 5 ILTIGCPGSGKSTWA 19 (152)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 688999999999765
No 94
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=91.03 E-value=0.069 Score=42.78 Aligned_cols=17 Identities=29% Similarity=0.317 Sum_probs=15.1
Q ss_pred CcEEEeCCCCCchhHHH
Q 015093 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~ 94 (413)
.++|+.||+|+|||..+
T Consensus 36 ~~~L~~GPpGtGKT~lA 52 (238)
T d1in4a2 36 DHVLLAGPPGLGKTTLA 52 (238)
T ss_dssp CCEEEESSTTSSHHHHH
T ss_pred CeEEEECCCCCcHHHHH
Confidence 46999999999999876
No 95
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=90.88 E-value=0.054 Score=40.83 Aligned_cols=18 Identities=33% Similarity=0.669 Sum_probs=15.5
Q ss_pred CCcEEEeCCCCCchhHHH
Q 015093 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~ 94 (413)
+-++++.||+|||||.++
T Consensus 5 ~~~I~i~G~~GsGKTT~~ 22 (174)
T d1y63a_ 5 GINILITGTPGTGKTSMA 22 (174)
T ss_dssp SCEEEEECSTTSSHHHHH
T ss_pred CCEEEEEeCCCCCHHHHH
Confidence 456999999999999876
No 96
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=90.59 E-value=0.31 Score=37.92 Aligned_cols=74 Identities=12% Similarity=0.201 Sum_probs=54.9
Q ss_pred CCCcEEEEEcCcccHHHHHHHHhh----CCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCc-----c-ccCCCCCC
Q 015093 278 AITQSVIFVNTRRKVDWLTDQMRS----RDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL-----L-ARGIDVQQ 347 (413)
Q Consensus 278 ~~~~~lIf~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~-----~-~~G~d~~~ 347 (413)
.+.+++|.+++++.|..+.+.+++ .+..+...+|+.+..++.+.++ ..+|+|+|+- + ...+++.+
T Consensus 71 ~~~~~lil~pt~~l~~q~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~l~-----~~~IlV~TP~~l~~~l~~~~~~~~~ 145 (208)
T d1hv8a1 71 NGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALK-----NANIVVGTPGRILDHINRGTLNLKN 145 (208)
T ss_dssp SSCCEEEECSCHHHHHHHHHHHHHHHCSSCCCEEEECTTSCHHHHHHHHH-----TCSEEEECHHHHHHHHHTTCSCTTS
T ss_pred cCcceEEEeeccccchhhhhhhhhhcccCCeEEEEeeCCCChHHHHHhcC-----CCCEEEEChHHHHHHHHcCCCCccc
Confidence 445899999999999998777765 3567888888888766554442 3679999952 2 34578889
Q ss_pred CCEEEEcCC
Q 015093 348 VSLVINYDL 356 (413)
Q Consensus 348 ~~~vi~~~~ 356 (413)
+.++|.-+.
T Consensus 146 l~~lViDEa 154 (208)
T d1hv8a1 146 VKYFILDEA 154 (208)
T ss_dssp CCEEEEETH
T ss_pred CcEEEEECh
Confidence 999886543
No 97
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=90.55 E-value=0.071 Score=40.01 Aligned_cols=16 Identities=25% Similarity=0.426 Sum_probs=14.2
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
++++.||+|||||..+
T Consensus 6 ~I~i~G~pGsGKTTia 21 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLG 21 (173)
T ss_dssp CEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999876
No 98
>d2eyqa2 c.37.1.19 (A:349-465) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=90.47 E-value=0.034 Score=39.08 Aligned_cols=78 Identities=14% Similarity=0.057 Sum_probs=58.5
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCccccCCC
Q 015093 265 WKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGID 344 (413)
Q Consensus 265 ~~~~~l~~~~~~~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~d 344 (413)
.-+..|...++.. .+++|+.|.+...++.+.+.|++.++.+..+.+.. .+.++. +.|+..-+..|+-
T Consensus 21 ~p~~~L~~~i~~~-~~~Vli~a~s~g~~erl~e~L~~~~i~~~~~~~~~----------~~~~~~--~~i~~~~l~~GF~ 87 (117)
T d2eyqa2 21 APLDALRKFLETF-DGPVVFSVESEGRREALGELLARIKIAPQRIMRLD----------EASDRG--RYLMIGAAEHGFV 87 (117)
T ss_dssp STTHHHHHHHTTC-CSCCCEEESSHHHHHHHHHHHGGGTCCCEECSSGG----------GCCTTC--CEEEECCCCSCEE
T ss_pred cHHHHHHHHHHhC-CCeEEEEECCccHHHHHHHHHHHcCCCceEecChh----------hhcCce--EEEEEecCccccc
Confidence 3455666666553 45899999999999999999999999887665542 233333 5666778999999
Q ss_pred CCCCCEEEEcC
Q 015093 345 VQQVSLVINYD 355 (413)
Q Consensus 345 ~~~~~~vi~~~ 355 (413)
+|....+|+.+
T Consensus 88 ~~~~~l~vItE 98 (117)
T d2eyqa2 88 DTVRNLALICE 98 (117)
T ss_dssp ETTTTEEEEEH
T ss_pred cCCCCEEEEEc
Confidence 99999888754
No 99
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=90.47 E-value=0.072 Score=42.73 Aligned_cols=17 Identities=24% Similarity=0.263 Sum_probs=15.1
Q ss_pred CcEEEeCCCCCchhHHH
Q 015093 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~ 94 (413)
.++|+.||+|+|||..+
T Consensus 36 ~~~Ll~GPpG~GKTtla 52 (239)
T d1ixsb2 36 EHLLLFGPPGLGKTTLA 52 (239)
T ss_dssp CCEEEECCTTSCHHHHH
T ss_pred CeEEEECCCCCCHHHHH
Confidence 46999999999999776
No 100
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=90.43 E-value=0.055 Score=40.67 Aligned_cols=16 Identities=31% Similarity=0.389 Sum_probs=14.0
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
-+++.||+|||||..+
T Consensus 4 lI~i~G~~GsGKTTva 19 (176)
T d2bdta1 4 LYIITGPAGVGKSTTC 19 (176)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3789999999999875
No 101
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.19 E-value=0.72 Score=34.39 Aligned_cols=75 Identities=11% Similarity=0.141 Sum_probs=56.1
Q ss_pred ceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHH----hcCCcEEEeChHHHHHHHHcCCCCCCCc
Q 015093 108 QCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL----SAGVHVVVGTPGRVFDMLRRQSLRPDYI 183 (413)
Q Consensus 108 ~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Iii~T~~~l~~~~~~~~~~~~~~ 183 (413)
..++||.|+++.-++.....+... +..+..++|+.......... .+..+|+|+|.- ...++++.++
T Consensus 32 ~~k~iVF~~~~~~~~~l~~~L~~~----g~~~~~~h~~~~~~~r~~~~~~f~~~~~~ilv~Td~------~~~Gid~~~v 101 (171)
T d1s2ma2 32 INQAIIFCNSTNRVELLAKKITDL----GYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDL------LTRGIDIQAV 101 (171)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHH----TCCEEEECTTSCHHHHHHHHHHHHTTSSSEEEESSC------SSSSCCCTTE
T ss_pred CCceEEEEeeeehhhHhHHhhhcc----cccccccccccchhhhhhhhhhcccCccccccchhH------hhhcccccee
Confidence 448999999999888877777665 77888899888766554443 356789999942 3567778888
Q ss_pred cEEEEccch
Q 015093 184 RMFVLDEAD 192 (413)
Q Consensus 184 ~~iIiDE~h 192 (413)
++||.-++.
T Consensus 102 ~~VI~~d~p 110 (171)
T d1s2ma2 102 NVVINFDFP 110 (171)
T ss_dssp EEEEESSCC
T ss_pred EEEEecCCc
Confidence 888866665
No 102
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=90.19 E-value=0.051 Score=41.46 Aligned_cols=18 Identities=17% Similarity=0.174 Sum_probs=15.4
Q ss_pred CCcEEEeCCCCCchhHHH
Q 015093 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~ 94 (413)
-+.++|.||+|+|||..+
T Consensus 7 ~K~I~i~G~~GsGKTTla 24 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLV 24 (192)
T ss_dssp CEEEEEECCTTSHHHHHH
T ss_pred ceEEEEECCCCCCHHHHH
Confidence 356999999999999765
No 103
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.08 E-value=0.085 Score=42.30 Aligned_cols=42 Identities=12% Similarity=-0.061 Sum_probs=26.1
Q ss_pred CCCcEEEeCCCCCchhHHHHHHHHHhccc---ccCceeEEEEccc
Q 015093 76 KGLDVIQQAQSGTGKTATFCSGILQQLDY---ESLQCQALVLAPT 117 (413)
Q Consensus 76 ~~~~~lv~~~tGsGKT~~~~~~i~~~l~~---~~~~~~~lvl~P~ 117 (413)
.|+-++|.||+|+|||..++-.+.+.... ...+..++++.-.
T Consensus 33 ~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~ 77 (251)
T d1szpa2 33 TGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTE 77 (251)
T ss_dssp SSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESS
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEeec
Confidence 45669999999999998775544433221 1223456666443
No 104
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=89.92 E-value=0.77 Score=35.26 Aligned_cols=73 Identities=12% Similarity=0.179 Sum_probs=53.7
Q ss_pred ceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHH----hcCCcEEEeChHHHHHHHHcCCCCCCCc
Q 015093 108 QCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL----SAGVHVVVGTPGRVFDMLRRQSLRPDYI 183 (413)
Q Consensus 108 ~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Iii~T~~~l~~~~~~~~~~~~~~ 183 (413)
+.++||.|+|+.-++.+...+... +..+..++|+.......... ....+|+|+|. ....+++..++
T Consensus 30 ~~~~IIF~~t~~~~~~l~~~l~~~----~~~~~~~h~~~~~~~r~~~~~~f~~g~~~ilvaTd------~~~~GiD~p~v 99 (200)
T d1oywa3 30 GKSGIIYCNSRAKVEDTAARLQSK----GISAAAYHAGLENNVRADVQEKFQRDDLQIVVATV------AFGMGINKPNV 99 (200)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHHT----TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEECT------TSCTTTCCTTC
T ss_pred CCCEEEEEeeehhhHHhhhhhccC----CceeEEecCCCcHHHHHHHHHHHhcccceEEEecc------hhhhccCCCCC
Confidence 458999999999998888777664 77888999988766554443 35678999994 33456777778
Q ss_pred cEEEEcc
Q 015093 184 RMFVLDE 190 (413)
Q Consensus 184 ~~iIiDE 190 (413)
++||.=+
T Consensus 100 ~~VI~~~ 106 (200)
T d1oywa3 100 RFVVHFD 106 (200)
T ss_dssp CEEEESS
T ss_pred CEEEECC
Confidence 8877433
No 105
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.55 E-value=0.11 Score=40.70 Aligned_cols=27 Identities=19% Similarity=-0.061 Sum_probs=21.0
Q ss_pred CCcEEEeCCCCCchhHHHHHHHHHhcc
Q 015093 77 GLDVIQQAQSGTGKTATFCSGILQQLD 103 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~~~~i~~~l~ 103 (413)
|+-++|.||+|+|||..++..+.+...
T Consensus 23 G~v~~i~G~~GsGKT~l~l~la~~~~~ 49 (242)
T d1n0wa_ 23 GSITEMFGEFRTGKTQICHTLAVTCQL 49 (242)
T ss_dssp TSEEEEECCTTSSHHHHHHHHHHHTTS
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 556999999999999887666665543
No 106
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.13 E-value=0.87 Score=33.79 Aligned_cols=97 Identities=15% Similarity=0.209 Sum_probs=65.2
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHH----
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL---- 155 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 155 (413)
..+.-+....|... +..++.. ....+++|.|+++.-++...+.++.. +..+..++|+..........
T Consensus 11 ~~v~v~~~~~K~~~-L~~ll~~----~~~~k~iiF~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~r~~~~~~fk 81 (168)
T d2j0sa2 11 FFVAVEREEWKFDT-LCDLYDT----LTITQAVIFCNTKRKVDWLTEKMREA----NFTVSSMHGDMPQKERESIMKEFR 81 (168)
T ss_dssp EEEEESSTTHHHHH-HHHHHHH----HTSSEEEEECSSHHHHHHHHHHHHHT----TCCCEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEecChHHHHHH-HHHHHHh----CCCCceEEEeeeHHHHHHHHHHhhhc----ccchhhhhhhhhHHHHHHHHHHHh
Confidence 34444555567533 3333332 23448999999999998887777664 67788888888766654443
Q ss_pred hcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccc
Q 015093 156 SAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEA 191 (413)
Q Consensus 156 ~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~ 191 (413)
....+|+|+|. +...+++..++++||.=++
T Consensus 82 ~g~~~iLv~Td------~~~rGiDi~~v~~VIn~d~ 111 (168)
T d2j0sa2 82 SGASRVLISTD------VWARGLDVPQVSLIINYDL 111 (168)
T ss_dssp HTSSCEEEECG------GGSSSCCCTTEEEEEESSC
T ss_pred cCCccEEeccc------hhcccccccCcceEEEecC
Confidence 35678999994 3456788888888876554
No 107
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=88.96 E-value=0.1 Score=42.63 Aligned_cols=17 Identities=29% Similarity=0.380 Sum_probs=14.7
Q ss_pred CcEEEeCCCCCchhHHH
Q 015093 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~ 94 (413)
+.+++.||+|+|||..+
T Consensus 33 ~~ilL~GpPGtGKT~la 49 (273)
T d1gvnb_ 33 TAFLLGGQPGSGKTSLR 49 (273)
T ss_dssp EEEEEECCTTSCTHHHH
T ss_pred EEEEEECCCCCCHHHHH
Confidence 34899999999999875
No 108
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=88.69 E-value=0.21 Score=40.85 Aligned_cols=42 Identities=17% Similarity=0.067 Sum_probs=28.1
Q ss_pred hhCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEccc
Q 015093 74 FCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPT 117 (413)
Q Consensus 74 ~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~ 117 (413)
+..|.-+++.|+||+|||..++..+.+... ..+.+++++..-
T Consensus 32 ~~~G~l~vi~G~~G~GKT~~~~~la~~~a~--~~g~~v~~~s~E 73 (277)
T d1cr2a_ 32 ARGGEVIMVTSGSGMGKSTFVRQQALQWGT--AMGKKVGLAMLE 73 (277)
T ss_dssp BCTTCEEEEECSTTSSHHHHHHHHHHHHHH--TSCCCEEEEESS
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHhhhh--hcccceeEeeec
Confidence 345667999999999999766554443321 224478888754
No 109
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=88.55 E-value=0.1 Score=39.17 Aligned_cols=18 Identities=22% Similarity=0.259 Sum_probs=15.1
Q ss_pred CCcEEEeCCCCCchhHHH
Q 015093 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~ 94 (413)
.+-+++.|++|||||..+
T Consensus 3 ~kiI~l~G~~GsGKsTva 20 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIV 20 (178)
T ss_dssp CCEEEEECCTTSSHHHHH
T ss_pred CeEEEEECCCCCCHHHHH
Confidence 455788999999999776
No 110
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=88.24 E-value=0.14 Score=38.03 Aligned_cols=17 Identities=18% Similarity=0.290 Sum_probs=14.8
Q ss_pred CcEEEeCCCCCchhHHH
Q 015093 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~ 94 (413)
+++++.|++|+|||.++
T Consensus 1 k~I~liG~~GsGKsTi~ 17 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLA 17 (161)
T ss_dssp CCEEEECCTTSCHHHHH
T ss_pred CcEEEECCCCCCHHHHH
Confidence 46888999999999876
No 111
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.19 E-value=0.31 Score=38.36 Aligned_cols=73 Identities=14% Similarity=0.129 Sum_probs=54.4
Q ss_pred CCcEEEEEcCcccHHHHHHHHhh----CCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCc------cccCCCCCCC
Q 015093 279 ITQSVIFVNTRRKVDWLTDQMRS----RDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL------LARGIDVQQV 348 (413)
Q Consensus 279 ~~~~lIf~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~------~~~G~d~~~~ 348 (413)
..+++|++|+++.|.++++.+.. .++.+..+.|+.+..+....+. . ...|+|+|+- -...+++.++
T Consensus 85 ~~~~lil~PtreLa~Qi~~~~~~l~~~~~i~~~~~~g~~~~~~~~~~l~---~-~~~Ilv~TPgrl~~~~~~~~~~~~~l 160 (222)
T d2j0sa1 85 ETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLD---Y-GQHVVAGTPGRVFDMIRRRSLRTRAI 160 (222)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECTTSCHHHHHHHHH---H-CCSEEEECHHHHHHHHHTTSSCCTTC
T ss_pred CceeEEecchHHHHHHHHHHHHHHhCccceeEEEEeecccchhhHHHhc---c-CCeEEeCCCCcHHhcccccccccccc
Confidence 34789999999999999888765 3567888888888766554443 2 3579999962 2466788889
Q ss_pred CEEEEcC
Q 015093 349 SLVINYD 355 (413)
Q Consensus 349 ~~vi~~~ 355 (413)
+++|+-+
T Consensus 161 ~~lVlDE 167 (222)
T d2j0sa1 161 KMLVLDE 167 (222)
T ss_dssp CEEEEET
T ss_pred eeeeecc
Confidence 9998644
No 112
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.19 E-value=1 Score=33.33 Aligned_cols=75 Identities=19% Similarity=0.182 Sum_probs=54.7
Q ss_pred CceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHH----hcCCcEEEeChHHHHHHHHcCCCCCCC
Q 015093 107 LQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL----SAGVHVVVGTPGRVFDMLRRQSLRPDY 182 (413)
Q Consensus 107 ~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Iii~T~~~l~~~~~~~~~~~~~ 182 (413)
...++||.|.++.-+......+.+ .+.++..++|+.......... .....++|+|.- ...+++..+
T Consensus 31 ~~~~~lIF~~~~~~~~~l~~~l~~----~~~~~~~~hg~~~~~~R~~~~~~F~~g~~~ilv~Td~------~~~Gid~~~ 100 (168)
T d2rb4a1 31 TIGQAIIFCQTRRNAKWLTVEMIQ----DGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNV------CARGIDVKQ 100 (168)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHT----TTCCEEEECSSCCHHHHHHHHHHHHTTSCSEEEECCS------CCTTTCCTT
T ss_pred CCCcEEEEcCHHHHHHHHHHHHHh----cCCcceecccchhhHHHHHHhhhhcCCceeeeechhh------hhhhhcccc
Confidence 345899999999988887776665 378899999998866654443 356789999843 345677777
Q ss_pred ccEEEEccc
Q 015093 183 IRMFVLDEA 191 (413)
Q Consensus 183 ~~~iIiDE~ 191 (413)
+++||.=++
T Consensus 101 v~~Vi~yd~ 109 (168)
T d2rb4a1 101 VTIVVNFDL 109 (168)
T ss_dssp EEEEEESSC
T ss_pred ccEEEeecC
Confidence 888776444
No 113
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=88.08 E-value=0.28 Score=37.54 Aligned_cols=22 Identities=18% Similarity=0.176 Sum_probs=17.4
Q ss_pred hhCCCcEEEeCCCCCchhHHHH
Q 015093 74 FCKGLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 74 ~~~~~~~lv~~~tGsGKT~~~~ 95 (413)
+.+.+-+++.||+|||||..+-
T Consensus 5 ~~~~~iI~l~G~pGSGKsT~a~ 26 (194)
T d3adka_ 5 LKKSKIIFVVGGPGSGKGTQCE 26 (194)
T ss_dssp HHTSCEEEEEECTTSSHHHHHH
T ss_pred ccCCcEEEEECCCCCCHHHHHH
Confidence 3445668899999999998763
No 114
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=88.08 E-value=0.12 Score=41.69 Aligned_cols=17 Identities=29% Similarity=0.403 Sum_probs=14.9
Q ss_pred CcEEEeCCCCCchhHHH
Q 015093 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~ 94 (413)
+.+|+.||+|+|||..+
T Consensus 41 ~~vLL~GppGtGKT~la 57 (246)
T d1d2na_ 41 VSVLLEGPPHSGKTALA 57 (246)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eEEEEECcCCCCHHHHH
Confidence 45999999999999775
No 115
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.06 E-value=0.13 Score=41.38 Aligned_cols=53 Identities=8% Similarity=-0.022 Sum_probs=30.0
Q ss_pred cCccCCCCCHHHHHHHHhCCCCCCcHH-HHhhhhh-----hhCCCcEEEeCCCCCchhHHH
Q 015093 40 DSFDSMGLKENLLRGIYAYGFEKPSAI-QQRGIVP-----FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 40 ~~~~~~~l~~~~~~~l~~~~~~~~~~~-Q~~~~~~-----~~~~~~~lv~~~tGsGKT~~~ 94 (413)
.+|+++...+...+.|...= .-+.. ....... ....+.+++.||+|+|||.++
T Consensus 11 ~~~~dlig~~~~~~~L~~~l--~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a 69 (253)
T d1sxja2 11 TNLQQVCGNKGSVMKLKNWL--ANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAA 69 (253)
T ss_dssp SSGGGCCSCHHHHHHHHHHH--HTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHH
T ss_pred CCHHHhcCCHHHHHHHHHHH--HhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHH
Confidence 46888888888777665420 00000 0001101 111246999999999999775
No 116
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=88.02 E-value=0.15 Score=38.98 Aligned_cols=19 Identities=21% Similarity=0.350 Sum_probs=15.7
Q ss_pred CCcEEEeCCCCCchhHHHH
Q 015093 77 GLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~~ 95 (413)
|-.+++.||+|||||+.+-
T Consensus 3 ~~riil~G~pGSGKsT~a~ 21 (190)
T d1ak2a1 3 GVRAVLLGPPGAGKGTQAP 21 (190)
T ss_dssp CCEEEEECCTTSSHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHH
Confidence 4457889999999998874
No 117
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=88.00 E-value=0.14 Score=38.56 Aligned_cols=19 Identities=21% Similarity=0.373 Sum_probs=15.8
Q ss_pred CCCcEEEeCCCCCchhHHH
Q 015093 76 KGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 76 ~~~~~lv~~~tGsGKT~~~ 94 (413)
+|.-+++.|++|||||.++
T Consensus 5 ~g~~I~l~G~~GsGKTTia 23 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIA 23 (183)
T ss_dssp CCEEEEEECSTTSSHHHHH
T ss_pred CCeEEEEECCCCCCHHHHH
Confidence 4555789999999999876
No 118
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.94 E-value=0.17 Score=40.62 Aligned_cols=51 Identities=8% Similarity=-0.105 Sum_probs=31.4
Q ss_pred CCCcEEEeCCCCCchhHHHHHHHHHhccccc---CceeEEEEcccHHHHHHHHH
Q 015093 76 KGLDVIQQAQSGTGKTATFCSGILQQLDYES---LQCQALVLAPTRELAQQIEK 126 (413)
Q Consensus 76 ~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~---~~~~~lvl~P~~~l~~q~~~ 126 (413)
.|+-++|.|++|+|||..++..+.+...... ....++++.........+..
T Consensus 36 ~G~~~~i~G~~GsGKT~lalq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (258)
T d1v5wa_ 36 SMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLR 89 (258)
T ss_dssp SSEEEEEECCTTCTHHHHHHHHHHHTTSCBTTTBCCCEEEEEESSSCCCHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHhhhhcccccceEEEechHHHHHHHHHH
Confidence 4566999999999999888766665543322 22345555554444433333
No 119
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=87.91 E-value=0.14 Score=38.83 Aligned_cols=16 Identities=19% Similarity=0.268 Sum_probs=14.2
Q ss_pred EEEeCCCCCchhHHHH
Q 015093 80 VIQQAQSGTGKTATFC 95 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~ 95 (413)
++|.||+|||||+.+-
T Consensus 3 I~i~G~pGSGKsT~a~ 18 (182)
T d1zina1 3 LVLMGLPGAGKGTQAE 18 (182)
T ss_dssp EEEECSTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 7899999999998763
No 120
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=87.86 E-value=0.11 Score=38.87 Aligned_cols=16 Identities=31% Similarity=0.422 Sum_probs=13.9
Q ss_pred EEEeCCCCCchhHHHH
Q 015093 80 VIQQAQSGTGKTATFC 95 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~ 95 (413)
+++.|++|||||..+-
T Consensus 9 ivl~G~~GsGKsT~a~ 24 (171)
T d1knqa_ 9 YVLMGVSGSGKSAVAS 24 (171)
T ss_dssp EEEECSTTSCHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 7889999999998763
No 121
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=87.54 E-value=0.15 Score=38.70 Aligned_cols=16 Identities=19% Similarity=0.291 Sum_probs=14.1
Q ss_pred EEEeCCCCCchhHHHH
Q 015093 80 VIQQAQSGTGKTATFC 95 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~ 95 (413)
+++.||+|||||+.+-
T Consensus 3 I~i~G~pGSGKsT~a~ 18 (182)
T d1s3ga1 3 IVLMGLPGAGKGTQAD 18 (182)
T ss_dssp EEEECSTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 7889999999998763
No 122
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=87.36 E-value=0.21 Score=39.52 Aligned_cols=39 Identities=18% Similarity=0.085 Sum_probs=25.4
Q ss_pred CCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcc
Q 015093 76 KGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAP 116 (413)
Q Consensus 76 ~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P 116 (413)
.|.-.+|.|++|+|||..++-.+.+.+... +.+++++..
T Consensus 25 ~G~~~~I~G~~G~GKT~la~~~~~~~~~~~--~~~~~~~s~ 63 (242)
T d1tf7a1 25 IGRSTLVSGTSGTGKTLFSIQFLYNGIIEF--DEPGVFVTF 63 (242)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHHH--CCCEEEEES
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhc--CCCcccccc
Confidence 356699999999999977654444333222 225677664
No 123
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=87.28 E-value=0.25 Score=37.26 Aligned_cols=17 Identities=24% Similarity=0.286 Sum_probs=14.4
Q ss_pred CcEEEeCCCCCchhHHH
Q 015093 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~ 94 (413)
+-++|.|++|||||...
T Consensus 2 kiI~i~G~~GsGKsT~~ 18 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSS 18 (190)
T ss_dssp CEEEEECCTTSCHHHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 44789999999999765
No 124
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=87.23 E-value=0.16 Score=38.52 Aligned_cols=18 Identities=22% Similarity=0.329 Sum_probs=14.9
Q ss_pred cEEEeCCCCCchhHHHHH
Q 015093 79 DVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~~~ 96 (413)
++++.||+|||||+.+-.
T Consensus 2 ~I~i~G~pGsGKsT~a~~ 19 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVK 19 (181)
T ss_dssp EEEEECCTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 478999999999987643
No 125
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=86.75 E-value=0.21 Score=37.43 Aligned_cols=18 Identities=17% Similarity=0.098 Sum_probs=15.2
Q ss_pred CcEEEeCCCCCchhHHHH
Q 015093 78 LDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~~ 95 (413)
+.+++.|++|+|||.++-
T Consensus 3 ~~Iil~G~~GsGKSTia~ 20 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGR 20 (170)
T ss_dssp CCEEEESCTTSSHHHHHH
T ss_pred CCEEEECCCCCCHHHHHH
Confidence 457889999999998773
No 126
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=86.51 E-value=0.16 Score=38.82 Aligned_cols=17 Identities=18% Similarity=0.255 Sum_probs=14.6
Q ss_pred cEEEeCCCCCchhHHHH
Q 015093 79 DVIQQAQSGTGKTATFC 95 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~~ 95 (413)
.+++.||+|||||..+-
T Consensus 5 ~I~i~GppGsGKsT~a~ 21 (189)
T d1zaka1 5 KVMISGAPASGKGTQCE 21 (189)
T ss_dssp CEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48899999999998763
No 127
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=86.21 E-value=0.17 Score=38.26 Aligned_cols=16 Identities=19% Similarity=0.181 Sum_probs=14.0
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
.+++.||+|||||+.+
T Consensus 2 ~I~i~G~pGSGKsT~~ 17 (179)
T d1e4va1 2 RIILLGAPVAGKGTQA 17 (179)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3688999999999886
No 128
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=86.15 E-value=0.17 Score=40.58 Aligned_cols=26 Identities=15% Similarity=-0.050 Sum_probs=20.5
Q ss_pred CCcEEEeCCCCCchhHHHHHHHHHhc
Q 015093 77 GLDVIQQAQSGTGKTATFCSGILQQL 102 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~~~~i~~~l 102 (413)
|+-++|.||+|+|||..++..+.+..
T Consensus 36 G~~~li~G~pGsGKT~~~lq~~~~~~ 61 (254)
T d1pzna2 36 QAITEVFGEFGSGKTQLAHTLAVMVQ 61 (254)
T ss_dssp SEEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHHhh
Confidence 45699999999999988766665544
No 129
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.00 E-value=0.2 Score=38.46 Aligned_cols=16 Identities=19% Similarity=0.285 Sum_probs=13.9
Q ss_pred EEEeCCCCCchhHHHH
Q 015093 80 VIQQAQSGTGKTATFC 95 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~ 95 (413)
+++.||+|||||..+-
T Consensus 11 I~i~GppGSGKsT~a~ 26 (196)
T d1ukza_ 11 IFVLGGPGAGKGTQCE 26 (196)
T ss_dssp EEEECSTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 7889999999998763
No 130
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=85.99 E-value=0.18 Score=38.73 Aligned_cols=16 Identities=25% Similarity=0.312 Sum_probs=14.1
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
-++|.||+|||||..+
T Consensus 8 iI~i~G~pGSGKsT~a 23 (194)
T d1qf9a_ 8 VVFVLGGPGSGKGTQC 23 (194)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4788999999999876
No 131
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=85.98 E-value=0.12 Score=43.69 Aligned_cols=19 Identities=26% Similarity=0.267 Sum_probs=16.1
Q ss_pred CCCcEEEeCCCCCchhHHH
Q 015093 76 KGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 76 ~~~~~lv~~~tGsGKT~~~ 94 (413)
.+.++|+.||+|+|||..+
T Consensus 27 ~~h~vLl~G~pG~GKT~la 45 (333)
T d1g8pa_ 27 GIGGVLVFGDRGTGKSTAV 45 (333)
T ss_dssp GGCCEEEECCGGGCTTHHH
T ss_pred CCCeEEEECCCCccHHHHH
Confidence 3467999999999999764
No 132
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=85.95 E-value=0.2 Score=40.03 Aligned_cols=28 Identities=14% Similarity=0.070 Sum_probs=22.2
Q ss_pred CCCcEEEeCCCCCchhHHHHHHHHHhcc
Q 015093 76 KGLDVIQQAQSGTGKTATFCSGILQQLD 103 (413)
Q Consensus 76 ~~~~~lv~~~tGsGKT~~~~~~i~~~l~ 103 (413)
.|.-++|.|++|+|||..++..+.+.+.
T Consensus 33 ~G~l~~i~G~~G~GKT~~~l~~a~~~~~ 60 (258)
T d2i1qa2 33 SQSVTEFAGVFGSGKTQIMHQSCVNLQN 60 (258)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHHTTC
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 3456999999999999888777766553
No 133
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.85 E-value=0.17 Score=38.18 Aligned_cols=16 Identities=25% Similarity=0.378 Sum_probs=13.6
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
-++++|++|||||..+
T Consensus 16 liil~G~pGsGKST~a 31 (172)
T d1yj5a2 16 VVVAVGFPGAGKSTFI 31 (172)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3888999999999654
No 134
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=85.79 E-value=0.21 Score=38.22 Aligned_cols=18 Identities=17% Similarity=0.211 Sum_probs=15.0
Q ss_pred cEEEeCCCCCchhHHHHH
Q 015093 79 DVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~~~ 96 (413)
.+++.||+|||||..+-.
T Consensus 8 rIiliG~PGSGKtT~a~~ 25 (189)
T d2ak3a1 8 RAAIMGAPGSGKGTVSSR 25 (189)
T ss_dssp EEEEECCTTSSHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHH
Confidence 488899999999988643
No 135
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.71 E-value=0.1 Score=40.03 Aligned_cols=18 Identities=33% Similarity=0.298 Sum_probs=14.5
Q ss_pred CcEEEeCCCCCchhHHHH
Q 015093 78 LDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~~ 95 (413)
..+++.|++|||||..+-
T Consensus 20 ~vI~L~G~pGSGKTTiAk 37 (195)
T d1x6va3 20 CTVWLTGLSGAGKTTVSM 37 (195)
T ss_dssp EEEEEESSCHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 346689999999998763
No 136
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.68 E-value=0.21 Score=38.22 Aligned_cols=16 Identities=25% Similarity=0.364 Sum_probs=14.1
Q ss_pred EEEeCCCCCchhHHHH
Q 015093 80 VIQQAQSGTGKTATFC 95 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~ 95 (413)
++|.||+|||||+.+-
T Consensus 4 I~i~GppGSGKsT~a~ 19 (194)
T d1teva_ 4 VFVLGGPGAGKGTQCA 19 (194)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 6899999999998873
No 137
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=85.55 E-value=2 Score=36.62 Aligned_cols=114 Identities=14% Similarity=0.088 Sum_probs=56.5
Q ss_pred CcEEEeCCCCCchhHHHHHHHHHhccccc-----CceeEEEEcccHHHH-----HHHHHHHHHhhccc---CceEEEEEC
Q 015093 78 LDVIQQAQSGTGKTATFCSGILQQLDYES-----LQCQALVLAPTRELA-----QQIEKVMRALGDYM---GVKVHACVG 144 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~~~~i~~~l~~~~-----~~~~~lvl~P~~~l~-----~q~~~~~~~~~~~~---~~~~~~~~~ 144 (413)
++.+++|++|.|||...--.+ ..+..+. .+.+++.+-+..-++ .+|.+.++.+.... ...+.++.+
T Consensus 44 ~n~llvG~~GvGKtaiv~~la-~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfid 122 (387)
T d1qvra2 44 NNPVLIGEPGVGKTAIVEGLA-QRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFID 122 (387)
T ss_dssp CCCEEEECTTSCHHHHHHHHH-HHHHHTCSCTTSTTCEEEEECC-----------CHHHHHHHHHHHHHTTCSSEEEEEC
T ss_pred CCCeEECCCCCCHHHHHHHHH-HHHHhCCCCHHHcCceEEEeeHhhhhcccCcchhHHHHHHHHHHHhccCCCceEEEec
Confidence 459999999999997653222 2232221 123444444443333 24555554443221 222332222
Q ss_pred Ccch-------------HHH-HHHH-hcCCc-EEEeChHHHHHHHHcCCCCCCCccEEEEccchh
Q 015093 145 GTSV-------------RED-QRIL-SAGVH-VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADE 193 (413)
Q Consensus 145 ~~~~-------------~~~-~~~~-~~~~~-Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~ 193 (413)
+... ... ...+ .+... |--+||+.+.. +.........|..|-++|-+.
T Consensus 123 e~h~l~~~g~~~g~~d~a~~Lkp~L~rg~~~~I~~tT~~ey~~-~e~d~al~rrF~~v~v~ep~~ 186 (387)
T d1qvra2 123 ELHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTV 186 (387)
T ss_dssp CC-------------------HHHHHTTCCCEEEEECHHHHHH-HTTCTTTCSCCCCEEECCCCH
T ss_pred cHHHHhcCCCCCCcccHHHHHHHHHhCCCcceeeecCHHHHHH-hcccHHHHHhcccccCCCCcH
Confidence 1110 000 0111 12233 55788888865 566666667789999999885
No 138
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=85.53 E-value=0.65 Score=38.20 Aligned_cols=53 Identities=19% Similarity=0.131 Sum_probs=38.9
Q ss_pred eeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCCcEEEeC
Q 015093 109 CQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGT 165 (413)
Q Consensus 109 ~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iii~T 165 (413)
++++|.||+..-+++.++.+++. +..+..++|........+......+|+|+|
T Consensus 37 g~~~~F~~s~~~~~~~a~~L~~~----g~~V~~l~~~~~~~e~~~~~~~~~~~~~~t 89 (299)
T d1yksa2 37 RPTAWFLPSIRAANVMAASLRKA----GKSVVVLNRKTFEREYPTIKQKKPDFILAT 89 (299)
T ss_dssp SCEEEECSCHHHHHHHHHHHHHT----TCCEEECCSSSCC--------CCCSEEEES
T ss_pred CCEEEEeCCHHHHHHHHHHHHhc----CCeEEEEcCcCcHhHHhhhhcCCcCEEEEe
Confidence 48999999999999998888875 567889999887777777777788999999
No 139
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.41 E-value=0.23 Score=37.59 Aligned_cols=17 Identities=18% Similarity=0.251 Sum_probs=14.4
Q ss_pred cEEEeCCCCCchhHHHH
Q 015093 79 DVIQQAQSGTGKTATFC 95 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~~ 95 (413)
.+++.||+|||||..+-
T Consensus 4 rIvl~G~pGSGKtT~a~ 20 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAP 20 (180)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 37889999999998863
No 140
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.13 E-value=1.7 Score=32.13 Aligned_cols=74 Identities=8% Similarity=0.048 Sum_probs=53.1
Q ss_pred eeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHH----hcCCcEEEeChHHHHHHHHcCCCCCCCcc
Q 015093 109 CQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL----SAGVHVVVGTPGRVFDMLRRQSLRPDYIR 184 (413)
Q Consensus 109 ~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Iii~T~~~l~~~~~~~~~~~~~~~ 184 (413)
.+++|.|+++.-++...+.+.+. +..+..++|+.........+ .+..+|+|+|.- ...+.++..++
T Consensus 28 ~k~iIF~~~~~~~~~l~~~L~~~----~~~~~~ihg~~~~~~r~~~l~~F~~g~~~iLv~T~~------~~~Gid~~~~~ 97 (168)
T d1t5ia_ 28 NQVVIFVKSVQRCIALAQLLVEQ----NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNL------FGRGMDIERVN 97 (168)
T ss_dssp SSEEEECSSHHHHHHHHHHHHHT----TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEESSC------CSTTCCGGGCS
T ss_pred CeEEEEEeeeecchhhhhhhccc----cccccccccccchhhhhhhhhhhccccceeeecccc------ccchhhcccch
Confidence 48999999999888877777664 77888999988766554433 346789999922 24556666777
Q ss_pred EEEEccch
Q 015093 185 MFVLDEAD 192 (413)
Q Consensus 185 ~iIiDE~h 192 (413)
++|.=+.-
T Consensus 98 ~vi~~~~p 105 (168)
T d1t5ia_ 98 IAFNYDMP 105 (168)
T ss_dssp EEEESSCC
T ss_pred hhhhhhcc
Confidence 77766554
No 141
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.07 E-value=0.38 Score=39.02 Aligned_cols=18 Identities=28% Similarity=0.272 Sum_probs=15.7
Q ss_pred CCcEEEeCCCCCchhHHH
Q 015093 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~ 94 (413)
.+.+|+.||+|+|||..+
T Consensus 41 ~~giLL~Gp~GtGKT~l~ 58 (265)
T d1r7ra3 41 SKGVLFYGPPGCGKTLLA 58 (265)
T ss_dssp CCEEEEBCCTTSSHHHHH
T ss_pred CCeEEEECCCCCcchhHH
Confidence 467999999999999765
No 142
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=85.00 E-value=1 Score=35.92 Aligned_cols=20 Identities=30% Similarity=0.516 Sum_probs=16.5
Q ss_pred hCCCcEEEeCCCCCchhHHH
Q 015093 75 CKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 75 ~~~~~~lv~~~tGsGKT~~~ 94 (413)
..+..++|.|++|+|||..+
T Consensus 21 ~~~~pvlI~Ge~GtGK~~~A 40 (247)
T d1ny5a2 21 CAECPVLITGESGVGKEVVA 40 (247)
T ss_dssp TCCSCEEEECSTTSSHHHHH
T ss_pred CCCCCEEEECCCCcCHHHHH
Confidence 34567999999999999765
No 143
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=84.99 E-value=0.4 Score=38.78 Aligned_cols=43 Identities=16% Similarity=0.042 Sum_probs=29.1
Q ss_pred CCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHH
Q 015093 77 GLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQ 122 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~ 122 (413)
|+-..+.+|+|+|||..++..+.+.... +..++|+----....
T Consensus 54 g~itei~G~~gsGKTtl~l~~~~~~q~~---g~~~vyidtE~~~~~ 96 (263)
T d1u94a1 54 GRIVEIYGPESSGKTTLTLQVIAAAQRE---GKTCAFIDAEHALDP 96 (263)
T ss_dssp TSEEEEECSTTSSHHHHHHHHHHHHHHT---TCCEEEEESSCCCCH
T ss_pred ceEEEEecCCCcHHHHHHHHHHHHHHcC---CCEEEEEccccccCH
Confidence 4558999999999998887766665433 336666654444433
No 144
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=84.96 E-value=2.7 Score=33.64 Aligned_cols=115 Identities=15% Similarity=0.143 Sum_probs=59.7
Q ss_pred CcEEEeCCCCCchhHHHHHHHHHhccccc-----CceeEEEEcccHHHH-----HHHHHHHHHhhccc--CceEEEEECC
Q 015093 78 LDVIQQAQSGTGKTATFCSGILQQLDYES-----LQCQALVLAPTRELA-----QQIEKVMRALGDYM--GVKVHACVGG 145 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~~~~i~~~l~~~~-----~~~~~lvl~P~~~l~-----~q~~~~~~~~~~~~--~~~~~~~~~~ 145 (413)
++++++||+|.|||...--.+. .+..+. .+.+++.+-+..-++ .+|.+.++.+.... .-++.++..+
T Consensus 40 ~n~lLVG~~GvGKTalv~~la~-ri~~~~vp~~l~~~~i~~l~~~~liag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDe 118 (268)
T d1r6bx2 40 NNPLLVGESGVGKTAIAEGLAW-RIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDE 118 (268)
T ss_dssp CEEEEECCTTSSHHHHHHHHHH-HHHHTCSCGGGTTCEEEECCCC---CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETT
T ss_pred CCcEEECCCCCcHHHHHHHHHH-HHHhCCcccccccceeEEeeechHhccCccchhHHHHHHHHHHHhhccCCceEEecc
Confidence 5699999999999966533332 222211 122444444433332 33444444433222 1223333221
Q ss_pred ---------cc--hHHHHHHHhc-----CCc-EEEeChHHHHHHHHcCCCCCCCccEEEEccchh
Q 015093 146 ---------TS--VREDQRILSA-----GVH-VVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADE 193 (413)
Q Consensus 146 ---------~~--~~~~~~~~~~-----~~~-Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~ 193 (413)
.. ...-...+.+ +.. |--+||+.+...++........+..|-++|-..
T Consensus 119 ih~l~~~g~~~g~~~d~a~~Lkp~L~rg~i~vIgatT~eey~~~~e~d~al~rrF~~I~V~Eps~ 183 (268)
T d1r6bx2 119 IHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 183 (268)
T ss_dssp TTTTTTSCCSSSCHHHHHHHHSSCSSSCCCEEEEEECHHHHHCCCCCTTSSGGGEEEEECCCCCH
T ss_pred hHHHhcCCCCCCccccHHHHhhHHHhCCCCeEEEeCCHHHHHHHHhhcHHHHhhhcccccCCCCH
Confidence 11 1112222321 223 446788888877777666667789999999884
No 145
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=84.61 E-value=2 Score=31.16 Aligned_cols=74 Identities=14% Similarity=0.299 Sum_probs=52.0
Q ss_pred ceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHH----hcCCcEEEeChHHHHHHHHcCCCCCCCc
Q 015093 108 QCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL----SAGVHVVVGTPGRVFDMLRRQSLRPDYI 183 (413)
Q Consensus 108 ~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Iii~T~~~l~~~~~~~~~~~~~~ 183 (413)
..++||.|+++.-+.++.+.+++. +..+..++++.........+ .+...|+|+|.- + ..+++...+
T Consensus 28 ~~k~IIF~~s~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~r~~~~~~f~~~~~~ilv~T~~-~-----~~Gid~~~v 97 (155)
T d1hv8a2 28 EFYGLVFCKTKRDTKELASMLRDI----GFKAGAIHGDLSQSQREKVIRLFKQKKIRILIATDV-M-----SRGIDVNDL 97 (155)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHHT----TCCEEEECSSSCHHHHHHHHHHHHTTSSSEEEECTT-H-----HHHCCCSCC
T ss_pred CCCEEEEECchHHHHHHHhhhccc----ccccccccccchhhhhhhhhhhhhcccceeeeehhH-H-----hhhhhhccC
Confidence 347999999999888887777764 77888888887765554443 346789999932 1 234566777
Q ss_pred cEEEEccc
Q 015093 184 RMFVLDEA 191 (413)
Q Consensus 184 ~~iIiDE~ 191 (413)
++||.=++
T Consensus 98 ~~Vi~~d~ 105 (155)
T d1hv8a2 98 NCVINYHL 105 (155)
T ss_dssp SEEEESSC
T ss_pred cEEEEecC
Confidence 88775433
No 146
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=84.48 E-value=0.32 Score=41.43 Aligned_cols=19 Identities=16% Similarity=0.053 Sum_probs=15.9
Q ss_pred CCcEEEeCCCCCchhHHHH
Q 015093 77 GLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~~ 95 (413)
++.+++.||+|+|||..+.
T Consensus 154 ~~~~~~~g~~~~gk~~~~~ 172 (362)
T d1svma_ 154 KRYWLFKGPIDSGKTTLAA 172 (362)
T ss_dssp CCEEEEECSTTSSHHHHHH
T ss_pred cCeEEEECCCCCCHHHHHH
Confidence 3569999999999997763
No 147
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=84.40 E-value=0.27 Score=36.89 Aligned_cols=23 Identities=30% Similarity=0.559 Sum_probs=16.7
Q ss_pred cEEEeCCCCCchhHHHHHHHHHhc
Q 015093 79 DVIQQAQSGTGKTATFCSGILQQL 102 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~~~~i~~~l 102 (413)
.++|.||+|+|||.. +..++..+
T Consensus 2 ki~I~G~~G~GKSTL-l~~i~~~l 24 (178)
T d1ye8a1 2 KIIITGEPGVGKTTL-VKKIVERL 24 (178)
T ss_dssp EEEEECCTTSSHHHH-HHHHHHHH
T ss_pred EEEEECCCCcHHHHH-HHHHHhcC
Confidence 378999999999975 34444444
No 148
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=83.43 E-value=0.2 Score=40.94 Aligned_cols=16 Identities=25% Similarity=0.131 Sum_probs=13.0
Q ss_pred EEEeCCCCCchhHHHH
Q 015093 80 VIQQAQSGTGKTATFC 95 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~ 95 (413)
+++.||+|+|||.+.-
T Consensus 49 l~l~GppGtGKT~l~~ 64 (287)
T d1w5sa2 49 YGSIGRVGIGKTTLAK 64 (287)
T ss_dssp EECTTCCSSSHHHHHH
T ss_pred EEeECCCCCCHHHHHH
Confidence 4568999999997753
No 149
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.01 E-value=0.34 Score=40.61 Aligned_cols=24 Identities=25% Similarity=0.469 Sum_probs=19.0
Q ss_pred hhhhhCCCc--EEEeCCCCCchhHHH
Q 015093 71 IVPFCKGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 71 ~~~~~~~~~--~lv~~~tGsGKT~~~ 94 (413)
++.++.|.+ ++..|+||||||.+.
T Consensus 68 v~~~l~G~n~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 68 VKDVLEGYNGTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp HHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHcCCCcceeeecccCCCCceec
Confidence 455567766 788999999999775
No 150
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=82.75 E-value=0.57 Score=34.50 Aligned_cols=15 Identities=47% Similarity=0.508 Sum_probs=12.9
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+.|.|+.|||||...
T Consensus 5 i~itG~~GSGKTTL~ 19 (170)
T d1np6a_ 5 LAFAAWSGTGKTTLL 19 (170)
T ss_dssp EEEECCTTSCHHHHH
T ss_pred EEEEcCCCCCHHHHH
Confidence 678999999999754
No 151
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=82.55 E-value=0.31 Score=36.92 Aligned_cols=18 Identities=28% Similarity=0.401 Sum_probs=15.0
Q ss_pred CCcEEEeCCCCCchhHHH
Q 015093 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~ 94 (413)
|+-+++.||.|+|||...
T Consensus 2 G~iivl~GpsG~GK~tl~ 19 (182)
T d1znwa1 2 GRVVVLSGPSAVGKSTVV 19 (182)
T ss_dssp CCEEEEECSTTSSHHHHH
T ss_pred CeEEEEECCCCCCHHHHH
Confidence 455889999999999764
No 152
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.40 E-value=1.2 Score=34.27 Aligned_cols=104 Identities=7% Similarity=0.141 Sum_probs=64.4
Q ss_pred CcEEEEEcCcccHHHHHHHHhhC-----CCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCc-----c-ccCCCCCCC
Q 015093 280 TQSVIFVNTRRKVDWLTDQMRSR-----DHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL-----L-ARGIDVQQV 348 (413)
Q Consensus 280 ~~~lIf~~~~~~a~~l~~~l~~~-----~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~-----~-~~G~d~~~~ 348 (413)
..++|.+|+++.+..+.+.++.. ...+....|+.+....... +.+...+|+|+|+- + ...+++.++
T Consensus 70 ~~~lil~PtreL~~qi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---l~~~~~~ilI~TP~rl~~~~~~~~~~l~~l 146 (207)
T d1t6na_ 70 VSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEV---LKKNCPHIVVGTPGRILALARNKSLNLKHI 146 (207)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHHTTTSTTCCEEEESCCSCHHHHHHH---HHHSCCSEEEECHHHHHHHHHTTSSCCTTC
T ss_pred ceEEEEeccchhhHHHHHHHHHHHhhCCCceeEEEeccccHHHHHHH---HHhcCCCEEEeCcchhhhhccCCceecccc
Confidence 46899999999999988888653 2356677788776544433 33456789999972 2 245788899
Q ss_pred CEEEEcCCC--CChhHHHhhhcccCCCCCcceEEEEeccc
Q 015093 349 SLVINYDLP--TQPENYLHRIGRSGRFGRKGVAINFVTRD 386 (413)
Q Consensus 349 ~~vi~~~~~--~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~ 386 (413)
.++|..+.. .+...+.+.+-+..+.-....-+++++..
T Consensus 147 ~~lVlDEaD~ll~~~~~~~~i~~I~~~~~~~~Q~il~SAT 186 (207)
T d1t6na_ 147 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSAT 186 (207)
T ss_dssp CEEEEESHHHHHSSHHHHHHHHHHHHTSCSSSEEEEEESC
T ss_pred ceeehhhhhhhhhcCCcHHHHHHHHHhCCCCCEEEEEeee
Confidence 998865432 11122333333433332233455666554
No 153
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=82.38 E-value=0.45 Score=37.83 Aligned_cols=20 Identities=25% Similarity=0.313 Sum_probs=16.8
Q ss_pred hhCCCcEEEeCCCCCchhHH
Q 015093 74 FCKGLDVIQQAQSGTGKTAT 93 (413)
Q Consensus 74 ~~~~~~~lv~~~tGsGKT~~ 93 (413)
+.+|..+.|+||+|||||..
T Consensus 26 i~~Ge~vaIvG~sGsGKSTL 45 (241)
T d2pmka1 26 IKQGEVIGIVGRSGSGKSTL 45 (241)
T ss_dssp EETTCEEEEECSTTSSHHHH
T ss_pred EcCCCEEEEECCCCCCHHHH
Confidence 44578899999999999954
No 154
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=82.13 E-value=0.4 Score=35.53 Aligned_cols=17 Identities=18% Similarity=0.235 Sum_probs=14.1
Q ss_pred cEEEeCCCCCchhHHHH
Q 015093 79 DVIQQAQSGTGKTATFC 95 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~~ 95 (413)
++++.|++|+|||.++-
T Consensus 3 ~IvliG~~G~GKSTig~ 19 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGR 19 (165)
T ss_dssp SEEEECSTTSSHHHHHH
T ss_pred cEEEECCCCCCHHHHHH
Confidence 36778999999998763
No 155
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=81.95 E-value=0.36 Score=36.74 Aligned_cols=15 Identities=27% Similarity=0.162 Sum_probs=12.6
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+-|.||+|||||..+
T Consensus 25 IgI~G~~GSGKSTla 39 (198)
T d1rz3a_ 25 LGIDGLSRSGKTTLA 39 (198)
T ss_dssp EEEEECTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 448999999999765
No 156
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=81.35 E-value=0.35 Score=36.79 Aligned_cols=17 Identities=29% Similarity=0.507 Sum_probs=14.2
Q ss_pred CcEEEeCCCCCchhHHH
Q 015093 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~ 94 (413)
+-++|.||+|+|||...
T Consensus 2 rpIvl~GpsG~GK~tl~ 18 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLL 18 (186)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred CeEEEECCCCCCHHHHH
Confidence 34899999999999754
No 157
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=81.28 E-value=0.84 Score=36.84 Aligned_cols=62 Identities=18% Similarity=0.128 Sum_probs=36.9
Q ss_pred hhhhhCCCcEEEeCCCCCchhHHHHHHHHHhccc-------ccCceeEEEEcccHHHHHHHHHHHHHhhc
Q 015093 71 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY-------ESLQCQALVLAPTRELAQQIEKVMRALGD 133 (413)
Q Consensus 71 ~~~~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~-------~~~~~~~lvl~P~~~l~~q~~~~~~~~~~ 133 (413)
++-+..|.-.+|.|++|+|||..++..++..... .....+++++.- ..-..++.+++..+..
T Consensus 23 i~G~~pg~~~~i~G~~G~GKS~l~l~la~~ia~g~~~~~~~~~~~~~vl~~~~-E~~~~~~~~Rl~~~~~ 91 (274)
T d1nlfa_ 23 LPNMVAGTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPA-EDPPTAIHHRLHALGA 91 (274)
T ss_dssp ETTEETTSEEEEEESTTSSHHHHHHHHHHHHHTCCCTTCCCCCCCCCEEEEES-SSCHHHHHHHHHHHHT
T ss_pred hCCccCCcEEEEEeCCCCCHHHHHHHHHHHHHcCCCcccccccCCCceEEEec-cchHHHHHHHHHHHhh
Confidence 4445567779999999999998776555432211 112235676653 3334555566665543
No 158
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.83 E-value=0.56 Score=37.53 Aligned_cols=21 Identities=19% Similarity=0.241 Sum_probs=17.2
Q ss_pred hhCCCcEEEeCCCCCchhHHH
Q 015093 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 ~~~~~~~lv~~~tGsGKT~~~ 94 (413)
+.+|+.+.|.||+|||||...
T Consensus 37 i~~Ge~vaivG~sGsGKSTLl 57 (251)
T d1jj7a_ 37 LRPGEVTALVGPNGSGKSTVA 57 (251)
T ss_dssp ECTTCEEEEECSTTSSHHHHH
T ss_pred EcCCCEEEEECCCCCcHHHHH
Confidence 345788999999999999653
No 159
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=80.67 E-value=0.47 Score=40.31 Aligned_cols=25 Identities=28% Similarity=0.469 Sum_probs=19.1
Q ss_pred hhhhhhCCCc--EEEeCCCCCchhHHH
Q 015093 70 GIVPFCKGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 70 ~~~~~~~~~~--~lv~~~tGsGKT~~~ 94 (413)
.++.++.|.+ ++..|+||||||.+.
T Consensus 71 lv~~~l~G~n~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 71 TVDDILNGYNGTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp HHHHHTTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHhhccCceeEEecccCCCCcceee
Confidence 3445567766 777999999999775
No 160
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.51 E-value=1.8 Score=33.13 Aligned_cols=74 Identities=18% Similarity=0.153 Sum_probs=51.8
Q ss_pred CCCcEEEEEcCcccHHHHHHHHhhC-----CCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCc------cccCCCCC
Q 015093 278 AITQSVIFVNTRRKVDWLTDQMRSR-----DHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL------LARGIDVQ 346 (413)
Q Consensus 278 ~~~~~lIf~~~~~~a~~l~~~l~~~-----~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~------~~~G~d~~ 346 (413)
....++|.+++++.+..+++.+... +..+....|+....++...+ ....+++|+|+- -...+++.
T Consensus 70 ~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l----~~~~~ivv~TPgrl~~~~~~~~~~~~ 145 (206)
T d1veca_ 70 DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRL----DDTVHVVIATPGRILDLIKKGVAKVD 145 (206)
T ss_dssp CSCCEEEECSCHHHHHHHHHHHHHHTTTSSSCCEEEECSSSCHHHHHHHT----TSCCSEEEECHHHHHHHHHTTCSCCT
T ss_pred cCcceEEEeecchhhHHHHHHHHHHhhcccCcccccccCCccHHHHHHHH----HhccCeEEeCCccccccccchhcccc
Confidence 4457999999999999988877642 35566777777665444333 356789999962 23457778
Q ss_pred CCCEEEEcC
Q 015093 347 QVSLVINYD 355 (413)
Q Consensus 347 ~~~~vi~~~ 355 (413)
+++++|.-+
T Consensus 146 ~l~~lVlDE 154 (206)
T d1veca_ 146 HVQMIVLDE 154 (206)
T ss_dssp TCCEEEEET
T ss_pred ccceEEEec
Confidence 899888644
No 161
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=79.95 E-value=0.75 Score=36.27 Aligned_cols=21 Identities=24% Similarity=0.306 Sum_probs=15.1
Q ss_pred EEEeCCCCCchhHHHHHHHHHh
Q 015093 80 VIQQAQSGTGKTATFCSGILQQ 101 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~ 101 (413)
++|.|+.|||||.. +-.+++.
T Consensus 3 i~v~G~~GsGKTTL-l~~ll~~ 23 (244)
T d1yrba1 3 VVFVGTAGSGKTTL-TGEFGRY 23 (244)
T ss_dssp EEEECSTTSSHHHH-HHHHHHH
T ss_pred EEEEcCCCCcHHHH-HHHHHHH
Confidence 57899999999964 3344443
No 162
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=79.60 E-value=0.74 Score=35.37 Aligned_cols=16 Identities=19% Similarity=0.152 Sum_probs=13.7
Q ss_pred EEEeCCCCCchhHHHH
Q 015093 80 VIQQAQSGTGKTATFC 95 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~ 95 (413)
++++|.+|||||..+-
T Consensus 5 i~l~GlpgsGKSTla~ 20 (213)
T d1bifa1 5 IVMVGLPARGKTYISK 20 (213)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 6789999999998763
No 163
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=79.46 E-value=0.64 Score=36.03 Aligned_cols=34 Identities=12% Similarity=0.115 Sum_probs=21.0
Q ss_pred CcEEEeCC-CCCchhHHHHHHHHHhcccccCceeEEEE
Q 015093 78 LDVIQQAQ-SGTGKTATFCSGILQQLDYESLQCQALVL 114 (413)
Q Consensus 78 ~~~lv~~~-tGsGKT~~~~~~i~~~l~~~~~~~~~lvl 114 (413)
+..+|.+- ||.|||.+.+..+... ..+ +.+++++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aL--a~~-G~rVl~i 36 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAA--KAA-GYRTAGY 36 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHH--HHT-TCCEEEE
T ss_pred ceEEEEECCCCccHHHHHHHHHHHH--HHC-CCeEEEE
Confidence 34667666 7999998875444333 222 3477776
No 164
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=79.34 E-value=0.36 Score=36.54 Aligned_cols=15 Identities=27% Similarity=0.417 Sum_probs=12.9
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|++|+|||..+
T Consensus 4 ivi~G~~GsGKTT~~ 18 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVL 18 (194)
T ss_dssp EEEEECTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 567999999999775
No 165
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=79.34 E-value=0.49 Score=40.33 Aligned_cols=24 Identities=29% Similarity=0.463 Sum_probs=18.2
Q ss_pred hhhhhCCCc--EEEeCCCCCchhHHH
Q 015093 71 IVPFCKGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 71 ~~~~~~~~~--~lv~~~tGsGKT~~~ 94 (413)
++.++.|.+ ++..|.||||||.+.
T Consensus 106 v~~~l~G~n~tifaYGqTGSGKTyTm 131 (362)
T d1v8ka_ 106 VQTIFEGGKATCFAYGQTGSGKTHTM 131 (362)
T ss_dssp HHHHHTTCEEEEEEEESTTSSHHHHH
T ss_pred HHHHHhccCceEEeeccCCCCCceee
Confidence 345566766 667899999999875
No 166
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=79.14 E-value=0.52 Score=36.67 Aligned_cols=16 Identities=25% Similarity=0.327 Sum_probs=13.4
Q ss_pred EEEeCCCCCchhHHHH
Q 015093 80 VIQQAQSGTGKTATFC 95 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~ 95 (413)
+.|.||+|||||.++-
T Consensus 6 I~I~GppGSGKgT~ak 21 (225)
T d1ckea_ 6 ITIDGPSGAGKGTLCK 21 (225)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 5667999999998873
No 167
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=78.87 E-value=3.4 Score=32.18 Aligned_cols=77 Identities=17% Similarity=0.295 Sum_probs=51.6
Q ss_pred cCCCcEEEEEcCcccHHHHHHHHhh----CCC----eeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeC-ccccC-CCCC
Q 015093 277 LAITQSVIFVNTRRKVDWLTDQMRS----RDH----TVSATHGDMDQNSRDIIMREFRSGSSRVLITTD-LLARG-IDVQ 346 (413)
Q Consensus 277 ~~~~~~lIf~~~~~~a~~l~~~l~~----~~~----~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~-~~~~G-~d~~ 346 (413)
..++++++.+|++..+.+.++.+++ .+. .+..+++.....++.+.+.... ..+|+|+|+ .+... .++.
T Consensus 84 ~~~~rvliv~Pt~~La~Q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~Ilv~Tp~~l~~~~~~~~ 161 (237)
T d1gkub1 84 LKGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLR--NFKIVITTTQFLSKHYRELG 161 (237)
T ss_dssp TTSCCEEEEESCHHHHHHHHHHHHHHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSGG--GCSEEEEEHHHHHHCSTTSC
T ss_pred HhcCeEEEEeccHHHHHHHHHHHHHHHHHcCCceEEEEeeeecccchhhhhhhhcccc--ccceeccChHHHHHhhhhcC
Confidence 3557899999999999988888764 233 2445666666666666655333 467999995 33333 4566
Q ss_pred CCCEEEEcC
Q 015093 347 QVSLVINYD 355 (413)
Q Consensus 347 ~~~~vi~~~ 355 (413)
.+++||+-+
T Consensus 162 ~~~~vVvDE 170 (237)
T d1gkub1 162 HFDFIFVDD 170 (237)
T ss_dssp CCSEEEESC
T ss_pred CCCEEEEEC
Confidence 788887644
No 168
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=78.69 E-value=0.71 Score=36.68 Aligned_cols=20 Identities=20% Similarity=0.136 Sum_probs=16.3
Q ss_pred hhCCCcEEEeCCCCCchhHH
Q 015093 74 FCKGLDVIQQAQSGTGKTAT 93 (413)
Q Consensus 74 ~~~~~~~lv~~~tGsGKT~~ 93 (413)
+..|..+.|.||+|||||..
T Consensus 25 i~~Ge~vaivG~sGsGKSTL 44 (242)
T d1mv5a_ 25 AQPNSIIAFAGPSGGGKSTI 44 (242)
T ss_dssp ECTTEEEEEECCTTSSHHHH
T ss_pred EcCCCEEEEECCCCCCHHHH
Confidence 34577799999999999954
No 169
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.66 E-value=0.48 Score=36.11 Aligned_cols=15 Identities=33% Similarity=0.609 Sum_probs=13.4
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
++|.||+|+|||..+
T Consensus 3 Ivl~GPsGsGK~tl~ 17 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLL 17 (190)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 789999999999764
No 170
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=78.48 E-value=0.77 Score=36.08 Aligned_cols=28 Identities=32% Similarity=0.355 Sum_probs=20.1
Q ss_pred hhCCCcEEEeCCCCCchhHHHHHHHHHhcc
Q 015093 74 FCKGLDVIQQAQSGTGKTATFCSGILQQLD 103 (413)
Q Consensus 74 ~~~~~~~lv~~~tGsGKT~~~~~~i~~~l~ 103 (413)
+.+|.-+.+.||.|||||.. +-++.-+.
T Consensus 28 i~~Ge~~~iiG~sGsGKSTL--l~~i~gl~ 55 (230)
T d1l2ta_ 28 IKEGEFVSIMGPSGSGKSTM--LNIIGCLD 55 (230)
T ss_dssp ECTTCEEEEECSTTSSHHHH--HHHHTTSS
T ss_pred EcCCCEEEEECCCCCCcchh--hHhccCCC
Confidence 34577899999999999954 34444443
No 171
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=78.34 E-value=0.54 Score=35.19 Aligned_cols=21 Identities=29% Similarity=0.438 Sum_probs=17.4
Q ss_pred CCCcEEEeCCCCCchhHHHHH
Q 015093 76 KGLDVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 76 ~~~~~lv~~~tGsGKT~~~~~ 96 (413)
.|+.+++.++.|+|||..++.
T Consensus 14 ~g~gvli~G~sG~GKS~lal~ 34 (177)
T d1knxa2 14 FGVGVLLTGRSGIGKSECALD 34 (177)
T ss_dssp TTEEEEEEESSSSSHHHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHHHH
Confidence 466799999999999987644
No 172
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=78.17 E-value=0.55 Score=40.04 Aligned_cols=25 Identities=28% Similarity=0.442 Sum_probs=19.3
Q ss_pred hhhhhhCCCc--EEEeCCCCCchhHHH
Q 015093 70 GIVPFCKGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 70 ~~~~~~~~~~--~lv~~~tGsGKT~~~ 94 (413)
.++.++.|.+ ++..|+||||||.+.
T Consensus 66 lv~~~l~G~n~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 66 LVQSAVDGYNVCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp HHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred HHHHHhcCCceeeeccccCCCCccccc
Confidence 3555667766 777999999999775
No 173
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=77.73 E-value=0.57 Score=39.98 Aligned_cols=25 Identities=32% Similarity=0.444 Sum_probs=19.4
Q ss_pred hhhhhhCCCc--EEEeCCCCCchhHHH
Q 015093 70 GIVPFCKGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 70 ~~~~~~~~~~--~lv~~~tGsGKT~~~ 94 (413)
.++.++.|.+ ++..|+||||||.+.
T Consensus 116 lv~~vl~G~n~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 116 LIQSALDGYNICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp HHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred HHHHHhcccceeEEeeccCCCccceEe
Confidence 4455667766 788999999999774
No 174
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=77.68 E-value=0.65 Score=39.28 Aligned_cols=24 Identities=25% Similarity=0.479 Sum_probs=18.6
Q ss_pred hhhhhCCCc--EEEeCCCCCchhHHH
Q 015093 71 IVPFCKGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 71 ~~~~~~~~~--~lv~~~tGsGKT~~~ 94 (413)
++.++.|.+ ++..|.||||||.+.
T Consensus 79 v~~~l~G~n~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 79 LQHAFEGYNVCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp HHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHhccCceeeeeccCCCCCceee
Confidence 444567766 788999999999774
No 175
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=77.64 E-value=0.55 Score=39.69 Aligned_cols=25 Identities=32% Similarity=0.420 Sum_probs=19.6
Q ss_pred hhhhhhCCCc--EEEeCCCCCchhHHH
Q 015093 70 GIVPFCKGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 70 ~~~~~~~~~~--~lv~~~tGsGKT~~~ 94 (413)
.++.++.|.+ ++..|+||||||.+.
T Consensus 72 lv~~~l~G~n~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 72 ILDEVIMGYNCTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp HHHHHHTTCEEEEEEEECTTSSHHHHH
T ss_pred hHHHHhccCCceEEeeeeccccceEEe
Confidence 4556667776 778999999999774
No 176
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=77.29 E-value=0.76 Score=35.44 Aligned_cols=18 Identities=39% Similarity=0.493 Sum_probs=15.1
Q ss_pred CCcEEEeCCCCCchhHHH
Q 015093 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~ 94 (413)
|+-++++||.|+|||...
T Consensus 2 G~livi~GPSG~GK~tl~ 19 (205)
T d1s96a_ 2 GTLYIVSAPSGAGKSSLI 19 (205)
T ss_dssp CCEEEEECCTTSCHHHHH
T ss_pred CeEEEEECCCCCCHHHHH
Confidence 555899999999999764
No 177
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=77.26 E-value=0.91 Score=36.94 Aligned_cols=15 Identities=27% Similarity=0.423 Sum_probs=11.9
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+-|.|++|||||..+
T Consensus 30 IGi~G~qGSGKSTl~ 44 (286)
T d1odfa_ 30 IFFSGPQGSGKSFTS 44 (286)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEeECCCCCCHHHHH
Confidence 346999999999654
No 178
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=77.21 E-value=1.8 Score=30.81 Aligned_cols=66 Identities=18% Similarity=0.215 Sum_probs=47.3
Q ss_pred ceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEE
Q 015093 108 QCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFV 187 (413)
Q Consensus 108 ~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iI 187 (413)
+.++||.|+|+.-+++.++.+++. +..+..++++...... .....+|+|+|. +...+++ .+++.||
T Consensus 35 ~~k~IVFc~t~~~ae~la~~L~~~----G~~~~~~H~~~~~~~~---~~~~~~vlvaTd------~~~~GiD-~~v~~Vi 100 (138)
T d1jr6a_ 35 GGRHLIFCHSKKKCDELAAKLVAL----GINAVAYYRGLDVSVI---PTNGDVVVVATD------ALMTGFT-GDFDSVI 100 (138)
T ss_dssp TSCEEEECSCHHHHHHHHHHHHHH----TCEEEEECTTCCSCCC---TTSSCEEEEESS------SSCSSSC-CCBSEEE
T ss_pred CCCEEEEeCcHHHHHHHHHHHhcc----ccchhhhhccchhhhh---hhhhcceeehhH------HHHhccc-cccceEE
Confidence 348999999999999988888775 7788888888764332 245678999993 2233454 4567765
No 179
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=77.10 E-value=0.68 Score=34.63 Aligned_cols=21 Identities=38% Similarity=0.529 Sum_probs=17.3
Q ss_pred CCCcEEEeCCCCCchhHHHHH
Q 015093 76 KGLDVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 76 ~~~~~lv~~~tGsGKT~~~~~ 96 (413)
.|+.+++.++.|+|||..++.
T Consensus 13 ~g~gvl~~G~sG~GKStlal~ 33 (176)
T d1kkma_ 13 YGLGVLITGDSGVGKSETALE 33 (176)
T ss_dssp TTEEEEEECCTTSCHHHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHHHH
Confidence 466799999999999987643
No 180
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=76.67 E-value=0.51 Score=39.23 Aligned_cols=16 Identities=31% Similarity=0.389 Sum_probs=13.2
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
.+++.||+|+|||+.+
T Consensus 125 ~~l~~G~pG~GKT~la 140 (321)
T d1w44a_ 125 MVIVTGKGNSGKTPLV 140 (321)
T ss_dssp EEEEECSSSSCHHHHH
T ss_pred eEEEECCCCccHHHHH
Confidence 3566899999999876
No 181
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=76.50 E-value=1.2 Score=35.84 Aligned_cols=45 Identities=13% Similarity=0.118 Sum_probs=29.3
Q ss_pred CCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHH
Q 015093 76 KGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQ 123 (413)
Q Consensus 76 ~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q 123 (413)
.|+-..+.+|.|+|||..++..+...... +..++|+-.-..+..+
T Consensus 59 ~g~i~e~~G~~~~GKT~l~l~~~~~~q~~---g~~~vyIDtE~~~~~e 103 (269)
T d1mo6a1 59 RGRVIEIYGPESSGKTTVALHAVANAQAA---GGVAAFIDAEHALDPD 103 (269)
T ss_dssp SSSEEEEECSSSSSHHHHHHHHHHHHHHT---TCEEEEEESSCCCCHH
T ss_pred cceeEEEecCCCcHHHHHHHHHHHHHhcC---CCEEEEEECCccCCHH
Confidence 35668999999999998876666544322 3366666554444433
No 182
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=76.39 E-value=0.81 Score=38.54 Aligned_cols=25 Identities=28% Similarity=0.424 Sum_probs=20.0
Q ss_pred hhhhhhCCCc--EEEeCCCCCchhHHH
Q 015093 70 GIVPFCKGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 70 ~~~~~~~~~~--~lv~~~tGsGKT~~~ 94 (413)
.++.++.|.+ ++..|.||||||.+.
T Consensus 74 ~v~~~l~G~n~~i~aYGqtgSGKT~T~ 100 (342)
T d1f9va_ 74 LVQSSLDGYNVCIFAYGQTGSGKTFTM 100 (342)
T ss_dssp HHGGGGGTCCEEEEEECCTTSSHHHHH
T ss_pred hhcchhcccccceeeeeccCCcccccc
Confidence 4566677876 777999999999875
No 183
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=76.27 E-value=15 Score=28.43 Aligned_cols=114 Identities=10% Similarity=0.016 Sum_probs=68.6
Q ss_pred CCcEEEEEcCcccHHHHHHHHhh----CCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCc------cccCCCCCCC
Q 015093 279 ITQSVIFVNTRRKVDWLTDQMRS----RDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL------LARGIDVQQV 348 (413)
Q Consensus 279 ~~~~lIf~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~------~~~G~d~~~~ 348 (413)
..+++|.+++++.+..+.+.+.. .++.+..+.|+....++.+. .....+|+|+|+- -...+++.++
T Consensus 98 ~~~alil~pt~el~~q~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~ivV~TP~~l~~~~~~~~~~l~~v 173 (238)
T d1wrba1 98 YPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIRE----VQMGCHLLVATPGRLVDFIEKNKISLEFC 173 (238)
T ss_dssp CCSEEEECSSHHHHHHHHHHHHHHHTTSSCCEEEECSSSCSHHHHHH----HSSCCSEEEECHHHHHHHHHTTSBCCTTC
T ss_pred CceEEEeccchhhhcchheeeeecccCCCcEEEEEeccchhhHHHhh----cccCCceeecCHHHHHhHHccCceecccc
Confidence 34799999999999998877654 36677778877665544322 3346789999972 2346788899
Q ss_pred CEEEEcCCC----C-ChhHHHhhhcccCCCCCcceEEEEeccccHHHHHHHHH
Q 015093 349 SLVINYDLP----T-QPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQR 396 (413)
Q Consensus 349 ~~vi~~~~~----~-s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~~~~~~~~~~ 396 (413)
.++|..+.. . -.....+.+.+..+......-+++++..=......+.+
T Consensus 174 ~~lViDEaD~ll~~~f~~~i~~Il~~~~~~~~~~~Q~il~SAT~~~~v~~l~~ 226 (238)
T d1wrba1 174 KYIVLDEADRMLDMGFEPQIRKIIEESNMPSGINRQTLMFSATFPKEIQKLAA 226 (238)
T ss_dssp CEEEEETHHHHHHTTCHHHHHHHHHSSCCCCGGGCEEEEEESSCCHHHHHHHH
T ss_pred ceeeeehhhhhhhhccHHHHHHHHHHhcCCCCCCCEEEEEeeeCCHHHHHHHH
Confidence 998864431 1 12233344445444322234556666543333344433
No 184
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.97 E-value=0.66 Score=34.88 Aligned_cols=17 Identities=12% Similarity=0.212 Sum_probs=14.3
Q ss_pred CcEEEeCCCCCchhHHH
Q 015093 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~ 94 (413)
+-++++||+|+|||...
T Consensus 4 k~ivl~Gpsg~GK~tl~ 20 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIK 20 (178)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred CcEEEECCCCCCHHHHH
Confidence 45889999999999764
No 185
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=75.77 E-value=0.76 Score=35.73 Aligned_cols=16 Identities=13% Similarity=0.239 Sum_probs=13.1
Q ss_pred EEEeCCCCCchhHHHH
Q 015093 80 VIQQAQSGTGKTATFC 95 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~ 95 (413)
+.|-||+|||||.++-
T Consensus 6 IaIdGp~GsGKgT~ak 21 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAK 21 (223)
T ss_dssp EEEECSSCSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 4567999999998874
No 186
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.77 E-value=0.6 Score=36.19 Aligned_cols=15 Identities=13% Similarity=0.266 Sum_probs=12.5
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+-|.|++|||||+.+
T Consensus 5 IgI~G~~gSGKSTla 19 (213)
T d1uj2a_ 5 IGVSGGTASGKSSVC 19 (213)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 447899999999765
No 187
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=75.62 E-value=2 Score=32.92 Aligned_cols=18 Identities=22% Similarity=0.337 Sum_probs=15.3
Q ss_pred CCcEEEeCCCCCchhHHH
Q 015093 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~ 94 (413)
|+-+++.|+.|||||+..
T Consensus 2 gkfIviEG~dGsGKsT~~ 19 (210)
T d4tmka_ 2 SKYIVIEGLEGAGKTTAR 19 (210)
T ss_dssp CCEEEEEECTTSCHHHHH
T ss_pred CCEEEEECCCCCCHHHHH
Confidence 566888999999999775
No 188
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=75.55 E-value=1.1 Score=36.84 Aligned_cols=15 Identities=20% Similarity=0.257 Sum_probs=12.9
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+-|.|+.|||||..+
T Consensus 83 IGIaG~sgSGKSTla 97 (308)
T d1sq5a_ 83 ISIAGSVAVGKSTTA 97 (308)
T ss_dssp EEEEECTTSSHHHHH
T ss_pred EEEeCCCCCCCcHHH
Confidence 567999999999765
No 189
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=75.53 E-value=0.86 Score=36.43 Aligned_cols=21 Identities=29% Similarity=0.363 Sum_probs=17.3
Q ss_pred hhCCCcEEEeCCCCCchhHHH
Q 015093 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 ~~~~~~~lv~~~tGsGKT~~~ 94 (413)
+.+|..+.|.+|+|||||...
T Consensus 38 i~~Ge~iaivG~sGsGKSTLl 58 (253)
T d3b60a1 38 IPAGKTVALVGRSGSGKSTIA 58 (253)
T ss_dssp ECTTCEEEEEECTTSSHHHHH
T ss_pred EcCCCEEEEECCCCChHHHHH
Confidence 445788999999999999653
No 190
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=75.46 E-value=0.65 Score=37.21 Aligned_cols=20 Identities=35% Similarity=0.356 Sum_probs=16.9
Q ss_pred hhCCCcEEEeCCCCCchhHH
Q 015093 74 FCKGLDVIQQAQSGTGKTAT 93 (413)
Q Consensus 74 ~~~~~~~lv~~~tGsGKT~~ 93 (413)
+.+|..+.|.||+|||||..
T Consensus 41 i~~Ge~vaivG~sGsGKSTL 60 (255)
T d2hyda1 41 IEKGETVAFVGMSGGGKSTL 60 (255)
T ss_dssp ECTTCEEEEECSTTSSHHHH
T ss_pred EcCCCEEEEECCCCCcHHHH
Confidence 44578899999999999965
No 191
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=74.94 E-value=0.79 Score=38.09 Aligned_cols=17 Identities=24% Similarity=0.376 Sum_probs=14.5
Q ss_pred cEEEeCCCCCchhHHHH
Q 015093 79 DVIQQAQSGTGKTATFC 95 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~~ 95 (413)
.++++||||+|||..+-
T Consensus 54 ~~lf~Gp~GvGKT~lak 70 (315)
T d1r6bx3 54 SFLFAGPTGVGKTEVTV 70 (315)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCcchhHHHHH
Confidence 48899999999997763
No 192
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=74.71 E-value=0.71 Score=35.45 Aligned_cols=20 Identities=35% Similarity=0.350 Sum_probs=16.5
Q ss_pred hCCCcEEEeCCCCCchhHHH
Q 015093 75 CKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 75 ~~~~~~lv~~~tGsGKT~~~ 94 (413)
.+|+-+.+.||.|+|||...
T Consensus 25 ~~Gei~~l~G~NGsGKSTLl 44 (200)
T d1sgwa_ 25 EKGNVVNFHGPNGIGKTTLL 44 (200)
T ss_dssp ETTCCEEEECCTTSSHHHHH
T ss_pred cCCCEEEEECCCCChHHHHH
Confidence 45777899999999999653
No 193
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=74.63 E-value=1.1 Score=34.65 Aligned_cols=112 Identities=10% Similarity=0.080 Sum_probs=61.7
Q ss_pred CCCcEEEEEcCcccHHHHHHHHhhC----CCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCc------cccCCCCCC
Q 015093 278 AITQSVIFVNTRRKVDWLTDQMRSR----DHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL------LARGIDVQQ 347 (413)
Q Consensus 278 ~~~~~lIf~~~~~~a~~l~~~l~~~----~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~------~~~G~d~~~ 347 (413)
....++|++++++.+..+...+... ........++.+..++...+ ...+|+|+|+. -..++++.+
T Consensus 77 ~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~IvI~TP~~l~~~~~~~~~~l~~ 151 (212)
T d1qdea_ 77 KAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGL-----RDAQIVVGTPGRVFDNIQRRRFRTDK 151 (212)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHTTTSCCCEEEECC----------C-----TTCSEEEECHHHHHHHHHTTSSCCTT
T ss_pred CCcceEEEcccHHHhhhhhhhhcccccccccceeeEeeccchhHHHHHh-----cCCcEEEECCCccccccccCceecCc
Confidence 3457999999999999988888653 34455555554443333221 24689999962 345678889
Q ss_pred CCEEEEcCCC----C-ChhHHHhhhcccCCCCCcceEEEEeccccHHHHHHHHHHh
Q 015093 348 VSLVINYDLP----T-QPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFY 398 (413)
Q Consensus 348 ~~~vi~~~~~----~-s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~~~~~~~~~~~~ 398 (413)
++++|.-+.. . -...+.+...+..+ ..-+++++..=......+.+.+
T Consensus 152 l~~lVlDEad~lld~~f~~~v~~I~~~~~~----~~Q~vl~SAT~~~~v~~l~~~~ 203 (212)
T d1qdea_ 152 IKMFILDEADEMLSSGFKEQIYQIFTLLPP----TTQVVLLSATMPNDVLEVTTKF 203 (212)
T ss_dssp CCEEEEETHHHHHHTTCHHHHHHHHHHSCT----TCEEEEEESSCCHHHHHHHHHH
T ss_pred ceEEeehhhhhhcccchHHHHHHHHHhCCC----CCeEEEEEeeCCHHHHHHHHHH
Confidence 9999875432 1 12333444444422 3345566655434444444433
No 194
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=74.15 E-value=1.3 Score=35.71 Aligned_cols=43 Identities=14% Similarity=0.032 Sum_probs=28.5
Q ss_pred CCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHH
Q 015093 77 GLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQ 122 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~ 122 (413)
|+-..+.+|.|+|||..++..+.+... .+..++|+-.-..+..
T Consensus 57 g~itei~G~~~sGKT~l~l~~~~~aqk---~g~~v~yiDtE~~~~~ 99 (268)
T d1xp8a1 57 GRITEIYGPESGGKTTLALAIVAQAQK---AGGTCAFIDAEHALDP 99 (268)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHHHH---TTCCEEEEESSCCCCH
T ss_pred ceEEEEecCCccchHHHHHHHHHHHHh---CCCEEEEEECCccCCH
Confidence 445899999999999887665555432 2346777765444433
No 195
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=73.96 E-value=0.8 Score=33.99 Aligned_cols=21 Identities=33% Similarity=0.485 Sum_probs=17.1
Q ss_pred CCCcEEEeCCCCCchhHHHHH
Q 015093 76 KGLDVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 76 ~~~~~lv~~~tGsGKT~~~~~ 96 (413)
.|+.+++.++.|+|||..++.
T Consensus 14 ~g~gvli~G~sg~GKS~la~~ 34 (169)
T d1ko7a2 14 YGVGVLITGDSGIGKSETALE 34 (169)
T ss_dssp TTEEEEEEESTTSSHHHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHHHH
Confidence 466799999999999976643
No 196
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=73.08 E-value=1.2 Score=33.81 Aligned_cols=15 Identities=33% Similarity=0.589 Sum_probs=13.1
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+.|.|+.|||||..+
T Consensus 12 I~ieG~~GsGKTTl~ 26 (197)
T d2vp4a1 12 VLIEGNIGSGKTTYL 26 (197)
T ss_dssp EEEECSTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 788999999999754
No 197
>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=72.86 E-value=2.2 Score=29.83 Aligned_cols=38 Identities=8% Similarity=0.066 Sum_probs=33.3
Q ss_pred cCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCC
Q 015093 277 LAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMD 314 (413)
Q Consensus 277 ~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~ 314 (413)
...++++++|.+-..+...+..|.+.|+++..+.|++.
T Consensus 78 ~~~~~ivl~C~~G~rS~~aa~~L~~~G~~v~~l~GG~~ 115 (130)
T d1yt8a4 78 VRGARLVLVDDDGVRANMSASWLAQMGWQVAVLDGLSE 115 (130)
T ss_dssp SBTCEEEEECSSSSHHHHHHHHHHHTTCEEEEECSCCG
T ss_pred CccceEEeecCCCccHHHHHHHHHHcCCCeEEEcCchH
Confidence 34578999999988999999999999999999998864
No 198
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=72.79 E-value=1.5 Score=34.38 Aligned_cols=19 Identities=32% Similarity=0.366 Sum_probs=16.0
Q ss_pred hCCCcEEEeCCCCCchhHH
Q 015093 75 CKGLDVIQQAQSGTGKTAT 93 (413)
Q Consensus 75 ~~~~~~lv~~~tGsGKT~~ 93 (413)
.+|.-+.+.||.|+|||..
T Consensus 24 ~~Gei~~liGpsGsGKSTL 42 (232)
T d2awna2 24 HEGEFVVFVGPSGCGKSTL 42 (232)
T ss_dssp CTTCEEEEECCTTSSHHHH
T ss_pred cCCCEEEEECCCCChHHHH
Confidence 4577799999999999954
No 199
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=72.48 E-value=1.8 Score=31.70 Aligned_cols=23 Identities=13% Similarity=-0.007 Sum_probs=15.5
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcc
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLD 103 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~ 103 (413)
+-|.|+.|||||... -.++..+.
T Consensus 4 i~I~G~~gSGKTTli-~~l~~~L~ 26 (165)
T d1xjca_ 4 WQVVGYKHSGKTTLM-EKWVAAAV 26 (165)
T ss_dssp EEEECCTTSSHHHHH-HHHHHHHH
T ss_pred EEEEeCCCCCHHHHH-HHHHHHHH
Confidence 358999999999654 33333443
No 200
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=72.32 E-value=2 Score=34.84 Aligned_cols=26 Identities=23% Similarity=0.226 Sum_probs=20.5
Q ss_pred hhhhCCCcEEEeCCCCCchhHHHHHH
Q 015093 72 VPFCKGLDVIQQAQSGTGKTATFCSG 97 (413)
Q Consensus 72 ~~~~~~~~~lv~~~tGsGKT~~~~~~ 97 (413)
-.+-+|+..+|.++.|+|||......
T Consensus 38 ~PigrGQr~~I~g~~g~GKT~l~~~i 63 (289)
T d1xpua3 38 SPIGRGQRGLIVAPPKAGKTMLLQNI 63 (289)
T ss_dssp SCCBTTCEEEEEECSSSSHHHHHHHH
T ss_pred ccccCCCeeeEeCCCCCCHHHHHHHH
Confidence 34557899999999999999775433
No 201
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=71.62 E-value=1.2 Score=34.70 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=20.3
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcc
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAP 116 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P 116 (413)
.+|.|.-|||||.. +-.++. ...+.++.|++.
T Consensus 6 ~iitGFLGaGKTTl-l~~lL~----~~~~~riaVI~N 37 (222)
T d1nija1 6 TLLTGFLGAGKTTL-LRHILN----EQHGYKIAVIEN 37 (222)
T ss_dssp EEEEESSSSSCHHH-HHHHHH----SCCCCCEEEECS
T ss_pred EEEeeCCCCCHHHH-HHHHHh----cCCCCcEEEEEe
Confidence 58899999999964 333332 233446767664
No 202
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=71.32 E-value=6.7 Score=29.64 Aligned_cols=74 Identities=19% Similarity=0.186 Sum_probs=53.6
Q ss_pred CCCcEEEEEcCcccHHHHHHHHhh----CCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCc------cccCCCCCC
Q 015093 278 AITQSVIFVNTRRKVDWLTDQMRS----RDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL------LARGIDVQQ 347 (413)
Q Consensus 278 ~~~~~lIf~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~------~~~G~d~~~ 347 (413)
.....++.+++...+......+.. .++.+...+|+.........+ .....|+|+|+. -...+++.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l----~~~~~Ili~TP~~l~~~l~~~~~~l~~ 143 (206)
T d1s2ma1 68 NKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRL----NETVHILVGTPGRVLDLASRKVADLSD 143 (206)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECSSSCHHHHHHHT----TSCCSEEEECHHHHHHHHHTTCSCCTT
T ss_pred ccccceeeccchhhhhhhhhhhhhcccccCeeEEeecCccchhhHHHHh----cccceEEEECCcccccccccceeeccc
Confidence 445788999998888777666654 467888899998876555443 346789999962 234678889
Q ss_pred CCEEEEcC
Q 015093 348 VSLVINYD 355 (413)
Q Consensus 348 ~~~vi~~~ 355 (413)
++++|.-+
T Consensus 144 l~~lV~DE 151 (206)
T d1s2ma1 144 CSLFIMDE 151 (206)
T ss_dssp CCEEEEES
T ss_pred ceEEEeec
Confidence 99988654
No 203
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=71.26 E-value=1 Score=37.32 Aligned_cols=17 Identities=24% Similarity=0.266 Sum_probs=14.4
Q ss_pred cEEEeCCCCCchhHHHH
Q 015093 79 DVIQQAQSGTGKTATFC 95 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~~ 95 (413)
.++++||||+|||..+-
T Consensus 55 ~~lf~Gp~G~GKt~lak 71 (315)
T d1qvra3 55 SFLFLGPTGVGKTELAK 71 (315)
T ss_dssp EEEEBSCSSSSHHHHHH
T ss_pred EEEEECCCcchHHHHHH
Confidence 37889999999998763
No 204
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=69.67 E-value=1.1 Score=35.49 Aligned_cols=19 Identities=42% Similarity=0.412 Sum_probs=16.1
Q ss_pred hCCCcEEEeCCCCCchhHH
Q 015093 75 CKGLDVIQQAQSGTGKTAT 93 (413)
Q Consensus 75 ~~~~~~lv~~~tGsGKT~~ 93 (413)
.+|.-+-+.||.|+|||..
T Consensus 27 ~~Ge~~~liG~sGaGKSTl 45 (240)
T d1g2912 27 KDGEFMILLGPSGCGKTTT 45 (240)
T ss_dssp ETTCEEEEECSTTSSHHHH
T ss_pred cCCCEEEEECCCCChHHHH
Confidence 4577799999999999965
No 205
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=69.59 E-value=1.9 Score=33.86 Aligned_cols=21 Identities=33% Similarity=0.409 Sum_probs=16.8
Q ss_pred hhCCCcEEEeCCCCCchhHHH
Q 015093 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 ~~~~~~~lv~~~tGsGKT~~~ 94 (413)
+.+|.-+.+.||.|+|||...
T Consensus 29 v~~Ge~~~liGpsGaGKSTLl 49 (239)
T d1v43a3 29 IKDGEFLVLLGPSGCGKTTTL 49 (239)
T ss_dssp ECTTCEEEEECCTTSSHHHHH
T ss_pred ECCCCEEEEECCCCChHHHHH
Confidence 345777999999999999653
No 206
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=69.26 E-value=1.2 Score=36.15 Aligned_cols=19 Identities=32% Similarity=0.396 Sum_probs=15.9
Q ss_pred hCCCcEEEeCCCCCchhHH
Q 015093 75 CKGLDVIQQAQSGTGKTAT 93 (413)
Q Consensus 75 ~~~~~~lv~~~tGsGKT~~ 93 (413)
.+|.-+.|.||+|+|||..
T Consensus 60 ~~Ge~vaivG~nGsGKSTL 78 (281)
T d1r0wa_ 60 EKGEMLAITGSTGSGKTSL 78 (281)
T ss_dssp CTTCEEEEEESTTSSHHHH
T ss_pred cCCCEEEEECCCCChHHHH
Confidence 3467799999999999964
No 207
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=69.01 E-value=2.9 Score=33.50 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=21.5
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEc
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLA 115 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~ 115 (413)
+++++.=|.|||.++...+...... +.+++++=
T Consensus 23 ii~sGKGGVGKTT~a~nLA~~lA~~---G~rVllvD 55 (279)
T d1ihua2 23 IMLMGKGGVGKTTMAAAIAVRLADM---GFDVHLTT 55 (279)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHT---TCCEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHC---CCcEEEEe
Confidence 6678999999998876555443322 33555543
No 208
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=69.00 E-value=1 Score=35.64 Aligned_cols=20 Identities=25% Similarity=0.154 Sum_probs=16.5
Q ss_pred hhCCCcEEEeCCCCCchhHH
Q 015093 74 FCKGLDVIQQAQSGTGKTAT 93 (413)
Q Consensus 74 ~~~~~~~lv~~~tGsGKT~~ 93 (413)
+.+|.-+.+.||.|||||..
T Consensus 28 i~~Ge~~~iiG~sGsGKSTL 47 (240)
T d3dhwc1 28 VPAGQIYGVIGASGAGKSTL 47 (240)
T ss_dssp ECSSCEEEEEESTTSSHHHH
T ss_pred EcCCCEEEEECCCCCCHHHH
Confidence 34577799999999999954
No 209
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=68.28 E-value=1.7 Score=34.01 Aligned_cols=21 Identities=24% Similarity=0.284 Sum_probs=16.8
Q ss_pred hhCCCcEEEeCCCCCchhHHH
Q 015093 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 ~~~~~~~lv~~~tGsGKT~~~ 94 (413)
+.+|.-+.+.||.|+|||...
T Consensus 23 i~~Ge~~~liGpsGaGKSTll 43 (229)
T d3d31a2 23 VESGEYFVILGPTGAGKTLFL 43 (229)
T ss_dssp ECTTCEEEEECCCTHHHHHHH
T ss_pred ECCCCEEEEECCCCCcHHHHH
Confidence 345777999999999999653
No 210
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=68.28 E-value=1.3 Score=34.91 Aligned_cols=20 Identities=30% Similarity=0.258 Sum_probs=16.6
Q ss_pred hCCCcEEEeCCCCCchhHHH
Q 015093 75 CKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 75 ~~~~~~lv~~~tGsGKT~~~ 94 (413)
.+|.-+.+.||.|+|||...
T Consensus 29 ~~Ge~~~iiG~sGsGKSTll 48 (242)
T d1oxxk2 29 ENGERFGILGPSGAGKTTFM 48 (242)
T ss_dssp CTTCEEEEECSCHHHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHH
Confidence 45777999999999999653
No 211
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=68.16 E-value=0.67 Score=35.73 Aligned_cols=82 Identities=16% Similarity=0.217 Sum_probs=49.3
Q ss_pred ceeEEEEcccHHHHHH-----HHHHHHHhhccc--CceEEEEECCcchHHHHHH----HhcCCcEEEeChHHHHHHHHcC
Q 015093 108 QCQALVLAPTRELAQQ-----IEKVMRALGDYM--GVKVHACVGGTSVREDQRI----LSAGVHVVVGTPGRVFDMLRRQ 176 (413)
Q Consensus 108 ~~~~lvl~P~~~l~~q-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~Iii~T~~~l~~~~~~~ 176 (413)
+.++.||||.++-.+. ..+....+.... +.++..++|.......... ...+.+|+|+|. +...
T Consensus 29 g~QvyvVcP~Ieese~~~~~~~~e~~~~l~~~~~p~~~v~~lHG~m~~~eke~~m~~F~~g~~~iLVaTt------ViE~ 102 (206)
T d1gm5a4 29 GGQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKLGLMHGRLSQEEKDRVMLEFAEGRYDILVSTT------VIEV 102 (206)
T ss_dssp SCCBCCBCCCC--------CHHHHHHHSGGGSCC---CBCCCCSSSCCSCSHHHHHHHTTTSSSBCCCSS------CCCS
T ss_pred CCCEEEEEeeecccccccchhhHHHHHHHHHhcCCCCeEEEEeecccHHHHHHHHHHHHCCCEEEEEEeh------hhhc
Confidence 4489999998643221 112222222222 5677788887654443333 345789999992 4456
Q ss_pred CCCCCCccEEEEccchhhh
Q 015093 177 SLRPDYIRMFVLDEADEML 195 (413)
Q Consensus 177 ~~~~~~~~~iIiDE~h~~~ 195 (413)
+++..+..++|+..++.+.
T Consensus 103 GIDip~a~~iii~~a~~fg 121 (206)
T d1gm5a4 103 GIDVPRANVMVIENPERFG 121 (206)
T ss_dssp CSCCTTCCEEEBCSCSSSC
T ss_pred cccccCCcEEEEEccCCcc
Confidence 7788889999999999763
No 212
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=67.58 E-value=1.6 Score=34.93 Aligned_cols=18 Identities=17% Similarity=0.134 Sum_probs=15.2
Q ss_pred CCcEEEeCCCCCchhHHH
Q 015093 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~ 94 (413)
++.++|.||.|+|||...
T Consensus 29 ~~~i~i~G~~G~GKTsLl 46 (283)
T d2fnaa2 29 APITLVLGLRRTGKSSII 46 (283)
T ss_dssp SSEEEEEESTTSSHHHHH
T ss_pred CCEEEEEcCCCCcHHHHH
Confidence 456899999999999664
No 213
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.38 E-value=1.7 Score=33.94 Aligned_cols=18 Identities=11% Similarity=0.100 Sum_probs=14.9
Q ss_pred CCcEEEeCCCCCchhHHH
Q 015093 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~lv~~~tGsGKT~~~ 94 (413)
.+-+.|.|+.|||||..+
T Consensus 2 ~k~I~ieG~dGsGKST~~ 19 (241)
T d1p5zb_ 2 IKKISIEGNIAAGKSTFV 19 (241)
T ss_dssp CEEEEEECSTTSSHHHHH
T ss_pred CCEEEEECCCCCCHHHHH
Confidence 345889999999999765
No 214
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=67.25 E-value=1.4 Score=36.73 Aligned_cols=19 Identities=37% Similarity=0.511 Sum_probs=15.3
Q ss_pred CCCc--EEEeCCCCCchhHHH
Q 015093 76 KGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 76 ~~~~--~lv~~~tGsGKT~~~ 94 (413)
.|.+ ++..|.||||||.+.
T Consensus 82 ~G~n~~i~aYGqTGSGKTyTm 102 (330)
T d1ry6a_ 82 NGCVCSCFAYGQTGSGKTYTM 102 (330)
T ss_dssp HCCEEEEEEECCTTSSHHHHH
T ss_pred cCCCeEEEeeeccccccceee
Confidence 4665 677899999999875
No 215
>d2b2na1 c.37.1.19 (A:26-333) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=65.56 E-value=19 Score=29.12 Aligned_cols=88 Identities=16% Similarity=0.050 Sum_probs=53.7
Q ss_pred cCCCcEEEEEcCcccHHHHHHHHhhC-CCeeEeecCC-------C-----CHHHHHHHHHHHhcCCCeEEEEeC-cc-cc
Q 015093 277 LAITQSVIFVNTRRKVDWLTDQMRSR-DHTVSATHGD-------M-----DQNSRDIIMREFRSGSSRVLITTD-LL-AR 341 (413)
Q Consensus 277 ~~~~~~lIf~~~~~~a~~l~~~l~~~-~~~~~~~~~~-------~-----~~~~r~~~~~~f~~~~~~vli~t~-~~-~~ 341 (413)
...+++||.|++...|..+++.|+.. +..+..+-+. . ...+|-+++..+.+++..|+|+|- .+ ..
T Consensus 12 ~~~~p~lvv~~~~~~A~~l~~~L~~~~~~~v~~fP~~e~lpyd~~s~~~~i~~~R~~~L~~l~~~~~~iiits~~al~~~ 91 (308)
T d2b2na1 12 RHAGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQR 91 (308)
T ss_dssp HCSSCEEEEESSHHHHHHHHHHHHTTCSSCEEECCCCCSCTTCSSCCCHHHHHHHHHHHHHGGGCCSSEEEEEHHHHTBC
T ss_pred hhCCCEEEEcCCHHHHHHHHHHHHhcCCCceEEcCCcccCccccCCCChHHHHHHHHHHHHHhhcCCceEEeechhhhhh
Confidence 34579999999999999999999763 2223222111 1 124678888888888888888874 22 22
Q ss_pred CCCCCC---CCEEEEcCCCCChhHHH
Q 015093 342 GIDVQQ---VSLVINYDLPTQPENYL 364 (413)
Q Consensus 342 G~d~~~---~~~vi~~~~~~s~~~~~ 364 (413)
...... ....+..+...+...+.
T Consensus 92 ~~p~~~~~~~~~~l~~g~~~~~~~l~ 117 (308)
T d2b2na1 92 VCPHSFLHGHALVMKKGQRLSRDALR 117 (308)
T ss_dssp CCCHHHHHHHCEEEETTCBCCHHHHH
T ss_pred cccHHHHHHHHHhhhhhccccHHHHH
Confidence 222111 22345556555555443
No 216
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=65.54 E-value=1.9 Score=40.01 Aligned_cols=57 Identities=19% Similarity=0.198 Sum_probs=34.3
Q ss_pred ccCccCCC-CCHHHHHHHHhCCCC--CCcHHH--HhhhhhhhC---CCcEEEeCCCCCchhHHHH
Q 015093 39 YDSFDSMG-LKENLLRGIYAYGFE--KPSAIQ--QRGIVPFCK---GLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 39 ~~~~~~~~-l~~~~~~~l~~~~~~--~~~~~Q--~~~~~~~~~---~~~~lv~~~tGsGKT~~~~ 95 (413)
.+++..++ .++............ .|..+. ..|+..+.. ++.+++.|..|||||.+.=
T Consensus 40 vNP~~~l~~y~~~~~~~y~~~~~~~~~PHif~iA~~Ay~~l~~~~~~QsIiisGeSGsGKTe~~k 104 (684)
T d1lkxa_ 40 TNPFKNLNIYKESDIKAYNGRYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASK 104 (684)
T ss_dssp ECCSSCCSCCSHHHHHHHSSCCGGGSCCCHHHHHHHHHHHHHHHCCCEEEEEECSTTSSHHHHHH
T ss_pred ECCCCCCCCCCHHHHHHHcCCCCCCCCChHHHHHHHHHHHHHHcCCCeEEEEEcCCCCCHHHHHH
Confidence 45666665 445555555433222 343333 366666544 3459999999999998863
No 217
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=65.54 E-value=8.2 Score=30.78 Aligned_cols=26 Identities=27% Similarity=0.272 Sum_probs=20.2
Q ss_pred hhCCCcEEEeCCCCCchhHHHHHHHH
Q 015093 74 FCKGLDVIQQAQSGTGKTATFCSGIL 99 (413)
Q Consensus 74 ~~~~~~~lv~~~tGsGKT~~~~~~i~ 99 (413)
+-+|+...|.++.|+|||......+.
T Consensus 65 igkGQr~~If~~~g~GKt~l~~~i~~ 90 (276)
T d2jdid3 65 YAKGGKIGLFGGAGVGKTVLIMELIN 90 (276)
T ss_dssp EETTCEEEEEECTTSSHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCCCCHHHHHHHHHH
Confidence 44688999999999999977544443
No 218
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=64.92 E-value=1.5 Score=34.65 Aligned_cols=20 Identities=35% Similarity=0.433 Sum_probs=16.5
Q ss_pred hCCCcEEEeCCCCCchhHHH
Q 015093 75 CKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 75 ~~~~~~lv~~~tGsGKT~~~ 94 (413)
.+|.-+-+.+|.|+|||...
T Consensus 30 ~~Gei~~liGpnGaGKSTl~ 49 (240)
T d1ji0a_ 30 PRGQIVTLIGANGAGKTTTL 49 (240)
T ss_dssp ETTCEEEEECSTTSSHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHH
Confidence 45777899999999999653
No 219
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=64.11 E-value=2.9 Score=33.79 Aligned_cols=35 Identities=17% Similarity=0.323 Sum_probs=24.3
Q ss_pred CcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEc
Q 015093 78 LDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLA 115 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~ 115 (413)
+-+++.+.=|.|||.++...+...... +.+++++-
T Consensus 9 ~~i~~sGKGGVGKTTvaa~lA~~lA~~---G~rVLlvD 43 (296)
T d1ihua1 9 PYLFFTGKGGVGKTSISCATAIRLAEQ---GKRVLLVS 43 (296)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHHT---TCCEEEEE
T ss_pred eEEEEECCCcChHHHHHHHHHHHHHHC---CCCEEEEe
Confidence 447889999999999886655544332 34777765
No 220
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=64.05 E-value=1.3 Score=33.32 Aligned_cols=14 Identities=21% Similarity=0.256 Sum_probs=12.0
Q ss_pred EEeCCCCCchhHHH
Q 015093 81 IQQAQSGTGKTATF 94 (413)
Q Consensus 81 lv~~~tGsGKT~~~ 94 (413)
-|.|+.|||||.++
T Consensus 7 gitG~~gSGKstva 20 (191)
T d1uf9a_ 7 GITGNIGSGKSTVA 20 (191)
T ss_dssp EEEECTTSCHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 47899999999875
No 221
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=63.98 E-value=1.6 Score=33.65 Aligned_cols=16 Identities=19% Similarity=0.233 Sum_probs=13.9
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
-+.+.|.+|||||..+
T Consensus 26 vIwltGlsGsGKTTia 41 (208)
T d1m7ga_ 26 TIWLTGLSASGKSTLA 41 (208)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4888999999999765
No 222
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=63.56 E-value=2.5 Score=30.73 Aligned_cols=37 Identities=35% Similarity=0.463 Sum_probs=25.2
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHH
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQ 122 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~ 122 (413)
+++.|+-|+|||.- .-.++..+.- .--|-.||-.|++
T Consensus 36 i~L~G~LGaGKTtf-vr~~~~~lg~-----~~~V~SPTF~l~~ 72 (158)
T d1htwa_ 36 VYLNGDLGAGKTTL-TRGMLQGIGH-----QGNVKSPTYTLVE 72 (158)
T ss_dssp EEEECSTTSSHHHH-HHHHHHHTTC-----CSCCCCCTTTCEE
T ss_pred EEEecCCCccHHHH-HHHHHhhccc-----ccccCCCceEEEE
Confidence 77899999999954 3455555422 2246788887764
No 223
>d2gc6a1 c.59.1.2 (A:297-425) Folylpolyglutamate synthetase, C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=63.22 E-value=7 Score=26.77 Aligned_cols=111 Identities=6% Similarity=0.007 Sum_probs=46.3
Q ss_pred EEEEccchhhhccCcHHHHHHHHhhCCCCceEEEEeeeCChhHHHHHHHhcCCCEEEEec-CCccc---cCCceEEEEEe
Q 015093 185 MFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVK-RDELT---LEGIKQFHVNV 260 (413)
Q Consensus 185 ~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~ 260 (413)
.+++|=||+-.+ ...+.+.++.......++.++++...+...++..+......+... ..... +..........
T Consensus 13 ~iilD~AHN~~~---~~~l~~~l~~~~~~~~~~v~g~~~dKd~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (129)
T d2gc6a1 13 LIVIDGAHNPDG---INGLITALKQLFSQPITVIAGILADKDYAAMADRLTAAFSTVYLVPVPGTPRALPEAGYEALHEG 89 (129)
T ss_dssp TEEECCCCSHHH---HHHHHHHHHHHCSSCCEEEECCC----CCSSSSTTTTTCSEEEECCCTTSCCCC-----------
T ss_pred cEEEECCCCHHH---HHHHhhccccccchhhhhhccccCCccHHHHHHhhhhhCCeEEEECCCCCcccChHHHHHHHHhc
Confidence 489999997522 223333333444444566666666544433333333332222221 11111 11111111111
Q ss_pred CccccHHHHHHHHHHhcCCCcEEEEEcCcccHHHHHHHH
Q 015093 261 DKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQM 299 (413)
Q Consensus 261 ~~~~~~~~~l~~~~~~~~~~~~lIf~~~~~~a~~l~~~l 299 (413)
.......+.+...++..++ ..++++-|--.+-.+.+.|
T Consensus 90 ~~~~~~~~ai~~a~~~~~~-~~vli~GS~ylvg~v~~~L 127 (129)
T d2gc6a1 90 RLKDSWQEALAASLNDVPD-QPIVITGSLYLASAVRQTL 127 (129)
T ss_dssp CBCSCHHHHHHHHHHHCTT-SCEEEESCHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhCCC-CcEEEEehHHHHHHHHHHh
Confidence 2223344555555555544 4566666666665555554
No 224
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=63.09 E-value=2.2 Score=39.74 Aligned_cols=56 Identities=16% Similarity=0.260 Sum_probs=33.7
Q ss_pred ccCccCCC-CCHHHHHHHHhCCCC--CC--cHHHHhhhhhhhC---CCcEEEeCCCCCchhHHH
Q 015093 39 YDSFDSMG-LKENLLRGIYAYGFE--KP--SAIQQRGIVPFCK---GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 39 ~~~~~~~~-l~~~~~~~l~~~~~~--~~--~~~Q~~~~~~~~~---~~~~lv~~~tGsGKT~~~ 94 (413)
.+++..++ .++............ .| +.+=..|+..+.. ++.+|+.|..|||||.+.
T Consensus 45 vNP~k~l~~y~~~~~~~y~~~~~~~~~PHif~vA~~Ay~~m~~~~~~Q~IiisGeSGaGKTe~~ 108 (710)
T d1br2a2 45 INPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENT 108 (710)
T ss_dssp ECCSSCCTTCCHHHHHHTTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHH
T ss_pred ECCCCCCCCCCHHHHHHHcCCCCCCCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHH
Confidence 46666666 344444444333222 23 2334566666554 345999999999999886
No 225
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=62.79 E-value=3.4 Score=38.90 Aligned_cols=57 Identities=11% Similarity=0.195 Sum_probs=33.8
Q ss_pred ccCccCCCC-CHHHHHHHHhCCCC--CCcHH--HHhhhhhhhC-C--CcEEEeCCCCCchhHHHH
Q 015093 39 YDSFDSMGL-KENLLRGIYAYGFE--KPSAI--QQRGIVPFCK-G--LDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 39 ~~~~~~~~l-~~~~~~~l~~~~~~--~~~~~--Q~~~~~~~~~-~--~~~lv~~~tGsGKT~~~~ 95 (413)
.+++..+++ ++............ .|..+ =..|+..+.. + +.++|.|..|||||.+.=
T Consensus 75 vNP~k~l~iy~~~~~~~y~~~~~~~~~PHiyavA~~Ay~~m~~~~~nQ~IiisGESGaGKTe~~K 139 (789)
T d1kk8a2 75 VNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTK 139 (789)
T ss_dssp ECCSSCCSTTSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTSEEEEEEECSTTSSHHHHHH
T ss_pred ECCCCCCCCCCHHHHHHHcCCCCCCCCCcHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHH
Confidence 466666663 44555555433222 23333 3456655543 3 449999999999998763
No 226
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=62.60 E-value=33 Score=26.97 Aligned_cols=16 Identities=19% Similarity=0.463 Sum_probs=13.9
Q ss_pred EEEeCCCCCchhHHHH
Q 015093 80 VIQQAQSGTGKTATFC 95 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~ 95 (413)
+.|+|.-|.|||..+.
T Consensus 47 v~I~GmgGiGKTtLA~ 62 (277)
T d2a5yb3 47 LFLHGRAGSGKSVIAS 62 (277)
T ss_dssp EEEECSTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 7799999999997763
No 227
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.48 E-value=3.4 Score=31.64 Aligned_cols=28 Identities=14% Similarity=0.240 Sum_probs=18.3
Q ss_pred CCCcEEEeCCCCCchhHHHHHHHHHhccc
Q 015093 76 KGLDVIQQAQSGTGKTATFCSGILQQLDY 104 (413)
Q Consensus 76 ~~~~~lv~~~tGsGKT~~~~~~i~~~l~~ 104 (413)
+|.-+.+.|+.|||||...- .+.+.+..
T Consensus 2 rG~lI~ieG~dGsGKsT~~~-~L~~~L~~ 29 (209)
T d1nn5a_ 2 RGALIVLEGVDRAGKSTQSR-KLVEALCA 29 (209)
T ss_dssp CCCEEEEEESTTSSHHHHHH-HHHHHHHH
T ss_pred CeeEEEEECCCCCCHHHHHH-HHHHHHHH
Confidence 34556778999999997653 33344433
No 228
>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}
Probab=62.41 E-value=4.3 Score=27.07 Aligned_cols=45 Identities=9% Similarity=0.060 Sum_probs=35.0
Q ss_pred HHHHHHhc-CCCcEEEEEcCcccHHHHHHHHhhCCC-eeEeecCCCC
Q 015093 270 LCDLYETL-AITQSVIFVNTRRKVDWLTDQMRSRDH-TVSATHGDMD 314 (413)
Q Consensus 270 l~~~~~~~-~~~~~lIf~~~~~~a~~l~~~l~~~~~-~~~~~~~~~~ 314 (413)
+...+... +..+++++|.+-..+...+..|.+.|+ ++..+.|++.
T Consensus 48 l~~~~~~~~~~~~ivv~c~~g~rs~~~a~~L~~~G~~~v~~l~GG~~ 94 (108)
T d1gmxa_ 48 LGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFE 94 (108)
T ss_dssp HHHHHHHSCTTSCEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHHH
T ss_pred HHHHhhhccccCcccccCCCChHHHHHHHHHHHcCCCCEEEEcChHH
Confidence 34444443 556899999999999999999999998 5778888853
No 229
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=62.19 E-value=3.2 Score=38.51 Aligned_cols=57 Identities=12% Similarity=0.211 Sum_probs=35.4
Q ss_pred ccCccCCCC-CHHHHHHHHhCCCC--CCcHH--HHhhhhhhhC---CCcEEEeCCCCCchhHHHH
Q 015093 39 YDSFDSMGL-KENLLRGIYAYGFE--KPSAI--QQRGIVPFCK---GLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 39 ~~~~~~~~l-~~~~~~~l~~~~~~--~~~~~--Q~~~~~~~~~---~~~~lv~~~tGsGKT~~~~ 95 (413)
.++|..+++ ++...+........ .|..+ =..|+..+.. ++.+++.|..|||||.+.=
T Consensus 79 vNP~k~l~iy~~~~~~~y~~~~~~~~~PHifaiA~~Ay~~m~~~~~nQsIiisGeSGaGKTe~~k 143 (712)
T d1d0xa2 79 VNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTK 143 (712)
T ss_dssp ECCSSCCSCCSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHH
T ss_pred ECCCCCCCCCCHHHHHHHcCCCcCCCCCcHHHHHHHHHHHHHHhCCCceEEEeCCCCCCHHHHHH
Confidence 466776664 55555555543332 33333 3456656553 3459999999999998863
No 230
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=62.14 E-value=1.7 Score=33.30 Aligned_cols=15 Identities=27% Similarity=0.366 Sum_probs=12.7
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+-|.|+.|||||.++
T Consensus 6 IgitG~igSGKStv~ 20 (208)
T d1vhta_ 6 VALTGGIGSGKSTVA 20 (208)
T ss_dssp EEEECCTTSCHHHHH
T ss_pred EEEECCCcCCHHHHH
Confidence 447999999999875
No 231
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=61.97 E-value=3.3 Score=34.21 Aligned_cols=16 Identities=31% Similarity=0.318 Sum_probs=13.2
Q ss_pred EEEeCCCCCchhHHHH
Q 015093 80 VIQQAQSGTGKTATFC 95 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~ 95 (413)
+=|.+++|+|||...-
T Consensus 54 igitG~pGaGKSTli~ 69 (323)
T d2qm8a1 54 VGITGVPGVGKSTTID 69 (323)
T ss_dssp EEEECCTTSCHHHHHH
T ss_pred EeeeCCCCCCHHHHHH
Confidence 6789999999996543
No 232
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=61.59 E-value=1.4 Score=34.62 Aligned_cols=21 Identities=19% Similarity=0.240 Sum_probs=17.2
Q ss_pred hhCCCcEEEeCCCCCchhHHH
Q 015093 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 ~~~~~~~lv~~~tGsGKT~~~ 94 (413)
+.+|.-+-+.||.|+|||...
T Consensus 22 I~~Gei~~iiG~nGaGKSTLl 42 (231)
T d1l7vc_ 22 VRAGEILHLVGPNGAGKSTLL 42 (231)
T ss_dssp EETTCEEECBCCTTSSHHHHH
T ss_pred EcCCCEEEEECCCCCcHHHHH
Confidence 446788999999999999653
No 233
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=60.96 E-value=1.9 Score=32.82 Aligned_cols=16 Identities=25% Similarity=0.210 Sum_probs=14.0
Q ss_pred CcEEEeCCCCCchhHH
Q 015093 78 LDVIQQAQSGTGKTAT 93 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~ 93 (413)
+++++.|++|+|||..
T Consensus 1 k~V~ivG~~~~GKTsL 16 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLL 16 (207)
T ss_dssp CEEEEECSTTSSHHHH
T ss_pred CEEEEECCCCCCHHHH
Confidence 4689999999999964
No 234
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=60.94 E-value=2 Score=34.32 Aligned_cols=21 Identities=24% Similarity=0.240 Sum_probs=16.7
Q ss_pred hhCCCcEEEeCCCCCchhHHH
Q 015093 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 ~~~~~~~lv~~~tGsGKT~~~ 94 (413)
+.+|.-+-+.||.|||||..+
T Consensus 25 i~~GEi~~iiG~sGsGKSTLl 45 (258)
T d1b0ua_ 25 ARAGDVISIIGSSGSGKSTFL 45 (258)
T ss_dssp ECTTCEEEEECCTTSSHHHHH
T ss_pred EcCCCEEEEECCCCCcHHHHH
Confidence 345777999999999999543
No 235
>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=60.52 E-value=2.5 Score=28.94 Aligned_cols=37 Identities=8% Similarity=0.012 Sum_probs=31.7
Q ss_pred CCCcEEEEEcCcccHHHHHHHHhhCCC-eeEeecCCCC
Q 015093 278 AITQSVIFVNTRRKVDWLTDQMRSRDH-TVSATHGDMD 314 (413)
Q Consensus 278 ~~~~~lIf~~~~~~a~~l~~~l~~~~~-~~~~~~~~~~ 314 (413)
+..+++++|.+-..+...+..|.+.|+ ++..+.|++.
T Consensus 71 ~~~~iv~~C~~G~rs~~a~~~L~~~G~~nv~~l~GG~~ 108 (119)
T d1tq1a_ 71 QSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYS 108 (119)
T ss_dssp TTSSEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHH
T ss_pred CCcEEEEEcCCcCcHHHHHHHHHhcccCCeEEecChHH
Confidence 456899999998889999999999988 5888899863
No 236
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=60.14 E-value=2 Score=32.82 Aligned_cols=15 Identities=33% Similarity=0.293 Sum_probs=12.4
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+-|.|+.|||||+++
T Consensus 5 IgITG~igSGKStv~ 19 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIA 19 (205)
T ss_dssp EEEECSTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 347999999999765
No 237
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}
Probab=59.61 E-value=16 Score=26.75 Aligned_cols=81 Identities=12% Similarity=0.064 Sum_probs=40.9
Q ss_pred CCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcc-cHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHH
Q 015093 76 KGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAP-TRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRI 154 (413)
Q Consensus 76 ~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P-~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (413)
++++++|.+.-|+||+.++. +.. . +.+-++++. +.+-.......++++....+..+....-... .... .
T Consensus 17 ~~k~vlIlGaGGaarai~~a--l~~----~--g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~-~ 86 (182)
T d1vi2a1 17 KGKTMVLLGAGGASTAIGAQ--GAI----E--GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQ-QAFA-E 86 (182)
T ss_dssp TTCEEEEECCSHHHHHHHHH--HHH----T--TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH-HHHH-H
T ss_pred CCCEEEEECCcHHHHHHHHH--Hhh----c--CCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccc-cchh-h
Confidence 57889999999999986542 111 1 223444444 3333444444445554444444433332221 1111 2
Q ss_pred HhcCCcEEE-eCh
Q 015093 155 LSAGVHVVV-GTP 166 (413)
Q Consensus 155 ~~~~~~Iii-~T~ 166 (413)
....++++| +||
T Consensus 87 ~~~~~diiIN~Tp 99 (182)
T d1vi2a1 87 ALASADILTNGTK 99 (182)
T ss_dssp HHHTCSEEEECSS
T ss_pred hhcccceeccccC
Confidence 224568887 555
No 238
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.31 E-value=2.2 Score=33.02 Aligned_cols=75 Identities=12% Similarity=0.222 Sum_probs=46.6
Q ss_pred CCCcEEEEEcCcccHHHHHHHHhh----CCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCc-----c-ccCCCCCC
Q 015093 278 AITQSVIFVNTRRKVDWLTDQMRS----RDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL-----L-ARGIDVQQ 347 (413)
Q Consensus 278 ~~~~~lIf~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~-----~-~~G~d~~~ 347 (413)
...++||++|+++.|.++++.+.. .+.....+.++....+. ......+..+|+|+|+. + ...+++..
T Consensus 79 ~~~~alil~Pt~eL~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~IvV~TP~rl~~~l~~~~~~~~~ 155 (218)
T d2g9na1 79 KATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAE---VQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKY 155 (218)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHHTTTTCCEEEECC--CCCST---TTSSSSCCCSEEEECHHHHHHHHHTTSSCSTT
T ss_pred cCccEEEEcccchhhhhHHHHHhhhccccceeEEeeecccchhHH---HHHHhcCCCEEEEeCChhHHHHHhcCCccccc
Confidence 445799999999999988887765 34455555554322111 11223345689999972 2 34467778
Q ss_pred CCEEEEcC
Q 015093 348 VSLVINYD 355 (413)
Q Consensus 348 ~~~vi~~~ 355 (413)
++++|.-+
T Consensus 156 l~~lVlDE 163 (218)
T d2g9na1 156 IKMFVLDE 163 (218)
T ss_dssp CCEEEEES
T ss_pred ceEEEeee
Confidence 89888644
No 239
>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=58.70 E-value=11 Score=25.21 Aligned_cols=46 Identities=9% Similarity=0.005 Sum_probs=35.0
Q ss_pred HHHHHHHhc---CCCcEEEEEcCcccHHHHHHHHhhCCC-eeEeecCCCC
Q 015093 269 TLCDLYETL---AITQSVIFVNTRRKVDWLTDQMRSRDH-TVSATHGDMD 314 (413)
Q Consensus 269 ~l~~~~~~~---~~~~~lIf~~~~~~a~~l~~~l~~~~~-~~~~~~~~~~ 314 (413)
.+...+... ...++++||.+-..+...+..|+..|+ ++..|.|++.
T Consensus 69 ~~~~~~~~~g~~~~~~ii~yC~sG~~A~~~~~~L~~lG~~~v~~y~Gs~~ 118 (120)
T d1urha2 69 ELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWS 118 (120)
T ss_dssp HHHHHHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCC
T ss_pred HhhhhhhhcccCccCceEEEccchhHHHHHHHHHHHcCCCCceEcCCChh
Confidence 444444433 456899999998889989999999998 5888888764
No 240
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=58.08 E-value=1.6 Score=36.08 Aligned_cols=15 Identities=20% Similarity=0.231 Sum_probs=13.1
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
.++.||+|||||...
T Consensus 29 nvi~G~NGsGKS~il 43 (329)
T g1xew.1 29 TAIVGANGSGKSNIG 43 (329)
T ss_dssp EEEEECTTSSSHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 589999999999753
No 241
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=57.77 E-value=2.3 Score=32.77 Aligned_cols=19 Identities=26% Similarity=0.386 Sum_probs=15.8
Q ss_pred CCCcEEEeCCCCCchhHHH
Q 015093 76 KGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 76 ~~~~~lv~~~tGsGKT~~~ 94 (413)
+|+-+.+.|+-|||||+..
T Consensus 2 kGk~I~iEG~DGsGKST~~ 20 (214)
T d1tmka_ 2 RGKLILIEGLDRTGKTTQC 20 (214)
T ss_dssp CCCEEEEEESTTSSHHHHH
T ss_pred CeEEEEEECCCCCcHHHHH
Confidence 3566889999999999775
No 242
>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}
Probab=57.69 E-value=3.9 Score=28.76 Aligned_cols=36 Identities=19% Similarity=0.319 Sum_probs=31.5
Q ss_pred CCCcEEEEEcCcccHHHHHHHHhhCCC-eeEeecCCC
Q 015093 278 AITQSVIFVNTRRKVDWLTDQMRSRDH-TVSATHGDM 313 (413)
Q Consensus 278 ~~~~~lIf~~~~~~a~~l~~~l~~~~~-~~~~~~~~~ 313 (413)
+..+++++|.+-..+...+..|.+.|+ ++..+.|++
T Consensus 81 ~~~~ivvyC~~G~rs~~aa~~L~~~G~~nV~~l~GG~ 117 (137)
T d1qxna_ 81 PEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGM 117 (137)
T ss_dssp TTSCEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCH
T ss_pred cccceeeeecccchHHHHHHHHHHcCCCcEEEecCHH
Confidence 456899999999999999999999998 578889985
No 243
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=57.26 E-value=5.7 Score=32.75 Aligned_cols=40 Identities=18% Similarity=0.252 Sum_probs=22.3
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHH
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTREL 120 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l 120 (413)
+-|.||+|+|||...-. +...+........++-+=|+...
T Consensus 57 IgitG~pGaGKSTLi~~-l~~~~~~~g~~vavlavDpss~~ 96 (327)
T d2p67a1 57 LGVTGTPGAGKSTFLEA-FGMLLIREGLKVAVIAVDPSSPV 96 (327)
T ss_dssp EEEEECTTSCHHHHHHH-HHHHHHHTTCCEEEEEECCC---
T ss_pred EEeeCCCCCCHHHHHHH-HHHHHHhcCCceeeecCCCceee
Confidence 77799999999965433 33333333333345556666554
No 244
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=56.63 E-value=4.5 Score=37.68 Aligned_cols=58 Identities=14% Similarity=0.351 Sum_probs=36.1
Q ss_pred ccCccCCCC-CHHHHHHHHhCCCC--CCcH--HHHhhhhhhhC---CCcEEEeCCCCCchhHHHHH
Q 015093 39 YDSFDSMGL-KENLLRGIYAYGFE--KPSA--IQQRGIVPFCK---GLDVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 39 ~~~~~~~~l-~~~~~~~l~~~~~~--~~~~--~Q~~~~~~~~~---~~~~lv~~~tGsGKT~~~~~ 96 (413)
.+++..+++ ++............ .|.. +=..|+..+.. ++.+++.|..|||||.+.=.
T Consensus 48 iNP~~~~~~y~~~~~~~y~~~~~~~~~PHif~vA~~Ay~~l~~~~~~Q~IiisGeSGsGKTe~~k~ 113 (730)
T d1w7ja2 48 INPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKY 113 (730)
T ss_dssp ECCSSCCSCCSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHH
T ss_pred ECCCCCCCCCCHHHHHHHcCCCcCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCHHHHHHH
Confidence 577777764 55555555433222 3333 34566666544 34599999999999987643
No 245
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=56.13 E-value=2.2 Score=36.67 Aligned_cols=16 Identities=19% Similarity=0.235 Sum_probs=13.4
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
-.+|.||+|||||...
T Consensus 27 l~~i~G~NGsGKS~il 42 (427)
T d1w1wa_ 27 FTSIIGPNGSGKSNMM 42 (427)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3688999999999664
No 246
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=55.44 E-value=1.1 Score=34.07 Aligned_cols=15 Identities=27% Similarity=0.481 Sum_probs=12.6
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
.+|.||+|||||...
T Consensus 27 tvi~G~NGsGKStil 41 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTM 41 (222)
T ss_dssp HHHHSCCSHHHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 578999999999654
No 247
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=55.05 E-value=2.8 Score=33.32 Aligned_cols=20 Identities=25% Similarity=0.351 Sum_probs=16.2
Q ss_pred hCCCcEEEeCCCCCchhHHH
Q 015093 75 CKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 75 ~~~~~~lv~~~tGsGKT~~~ 94 (413)
.+|.-+-+.+|.|+|||...
T Consensus 28 ~~Gei~~liG~nGaGKSTLl 47 (254)
T d1g6ha_ 28 NKGDVTLIIGPNGSGKSTLI 47 (254)
T ss_dssp ETTCEEEEECSTTSSHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHH
Confidence 45677899999999999643
No 248
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=54.74 E-value=9.8 Score=25.57 Aligned_cols=50 Identities=12% Similarity=0.200 Sum_probs=33.7
Q ss_pred CcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEE
Q 015093 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335 (413)
Q Consensus 280 ~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~ 335 (413)
+|+||.=.....+..+...|++.|+.+...+++ ++.++.+++...++++.
T Consensus 1 KrILiVdDd~~~~~~l~~~L~~~g~~v~~a~~~------~eal~~~~~~~~dlill 50 (117)
T d2a9pa1 1 KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNG------REALEQFEAEQPDIIIL 50 (117)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSH------HHHHHHHHHHCCSEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCH------HHHHHHHHhcCCCEEEe
Confidence 357777777778888888888888877766544 34455555555665553
No 249
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=54.48 E-value=2.8 Score=32.86 Aligned_cols=15 Identities=20% Similarity=0.341 Sum_probs=12.3
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
-+.+.||.|+|||..
T Consensus 26 ~~~liGpnGaGKSTl 40 (240)
T d2onka1 26 YCVLLGPTGAGKSVF 40 (240)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCChHHHH
Confidence 456799999999954
No 250
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=54.39 E-value=20 Score=24.11 Aligned_cols=50 Identities=10% Similarity=0.076 Sum_probs=35.7
Q ss_pred CcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEE
Q 015093 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335 (413)
Q Consensus 280 ~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~ 335 (413)
+++||.=........+.+.|+..|+.+...+++ .+.++.+++...+++++
T Consensus 4 ~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~------~~a~~~l~~~~~dlii~ 53 (123)
T d1krwa_ 4 GIVWVVDDDSSIRWVLERALAGAGLTCTTFENG------NEVLAALASKTPDVLLS 53 (123)
T ss_dssp CEEEEESSSHHHHHHHHHHHHHTTCEEEEESSS------HHHHHHHTTCCCSEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCH------HHHHHHHHhCCCCEEEe
Confidence 457777777777888888888888888776665 35566666666666665
No 251
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=54.30 E-value=46 Score=26.06 Aligned_cols=95 Identities=20% Similarity=0.226 Sum_probs=57.3
Q ss_pred CchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchH--------H----HHHHH
Q 015093 88 TGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVR--------E----DQRIL 155 (413)
Q Consensus 88 sGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~~ 155 (413)
+.|-.. +.-++..+.....+.+++|.|.++.-+..+.+.+.+. ++++..+.|..... . .....
T Consensus 142 ~pK~~~-l~~~l~~~~~~~~~~k~iiF~~~~~~~~~~~~~L~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~ 216 (286)
T d1wp9a2 142 HPKMDK-LKEIIREQLQRKQNSKIIVFTNYRETAKKIVNELVKD----GIKAKRFVGQASKENDRGLSQREQKLILDEFA 216 (286)
T ss_dssp CHHHHH-HHHHHHHHHHHCTTCCEEEECSCHHHHHHHHHHHHHT----TCCEEEECCSSCC-------CCHHHHHHHHHH
T ss_pred CcHHHH-HHHHHHHHHHhCCCCcEEEEeCcHHhHHHHHHHHHHc----CCceEEeeccccccccchhchHHHHHHHHHHH
Confidence 345433 2233333333344558999999999888888877664 55666666543221 1 11223
Q ss_pred hcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchh
Q 015093 156 SAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADE 193 (413)
Q Consensus 156 ~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~ 193 (413)
.+.++|+|+|- ....++++..+++||.=+.+.
T Consensus 217 ~g~~~vLv~T~------~~~~Gld~~~~~~Vi~~d~~~ 248 (286)
T d1wp9a2 217 RGEFNVLVATS------VGEEGLDVPEVDLVVFYEPVP 248 (286)
T ss_dssp HTSCSEEEECG------GGGGGGGSTTCCEEEESSCCH
T ss_pred cCCCcEEEEcc------ceeccccCCCCCEEEEeCCCC
Confidence 45788999992 234566777888888766653
No 252
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=54.21 E-value=31 Score=25.43 Aligned_cols=60 Identities=13% Similarity=0.140 Sum_probs=51.8
Q ss_pred CCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeC
Q 015093 278 AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD 337 (413)
Q Consensus 278 ~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~ 337 (413)
..+++++.+|++..+...++.|+..+.......+.....+..........+...++++|.
T Consensus 64 ~~~~~~~v~P~~~L~~q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~t~ 123 (206)
T d1oywa2 64 LNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAP 123 (206)
T ss_dssp SSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHHTCCSEEEECH
T ss_pred ccCceEEeccchhhhhhHHHHHHhhcccccccccccccccchhHHHHHhcCCceEEEEec
Confidence 456899999999999999999999988888888888888888777888888899998885
No 253
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=53.40 E-value=2.6 Score=33.82 Aligned_cols=15 Identities=27% Similarity=0.492 Sum_probs=13.0
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
.+|+|+.|+|||...
T Consensus 26 n~IvG~NGsGKStiL 40 (292)
T g1f2t.1 26 NLIIGQNGSGKSSLL 40 (292)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 589999999999764
No 254
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=53.21 E-value=3.2 Score=32.56 Aligned_cols=20 Identities=30% Similarity=0.270 Sum_probs=15.7
Q ss_pred hCCCcEEEeCCCCCchhHHH
Q 015093 75 CKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 75 ~~~~~~lv~~~tGsGKT~~~ 94 (413)
..|.-+-+.||.|+|||...
T Consensus 26 ~~Gei~glvG~nGaGKSTLl 45 (238)
T d1vpla_ 26 EEGEIFGLIGPNGAGKTTTL 45 (238)
T ss_dssp CTTCEEEEECCTTSSHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHH
Confidence 34666789999999999653
No 255
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=53.01 E-value=14 Score=27.26 Aligned_cols=73 Identities=19% Similarity=0.255 Sum_probs=51.6
Q ss_pred CCCcEEEEEcCcccHHHHHHHHhhC----CCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCc------cccCCCCCC
Q 015093 278 AITQSVIFVNTRRKVDWLTDQMRSR----DHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDL------LARGIDVQQ 347 (413)
Q Consensus 278 ~~~~~lIf~~~~~~a~~l~~~l~~~----~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~------~~~G~d~~~ 347 (413)
.++++++.+|++..+++.++.+.+. +..+..++++....++.+.... ..++++|.- ....+....
T Consensus 51 ~~~~il~i~P~~~L~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~i~t~~~~~~~~~~~~~~~~~ 125 (200)
T d1wp9a1 51 YGGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVALTGEKSPEERSKAWAR-----AKVIVATPQTIENDLLAGRISLED 125 (200)
T ss_dssp SCSCEEEECSSHHHHHHHHHHHHHHBCSCGGGEEEECSCSCHHHHHHHHHH-----CSEEEECHHHHHHHHHTTSCCTTS
T ss_pred cCCcEEEEcCchHHHHHHHHHHHHhhcccccceeeeecccchhHHHHhhhc-----ccccccccchhHHHHhhhhhhccc
Confidence 4578999999999888877777653 5667888999888888766543 357788741 223345556
Q ss_pred CCEEEEcC
Q 015093 348 VSLVINYD 355 (413)
Q Consensus 348 ~~~vi~~~ 355 (413)
++.+|.-+
T Consensus 126 ~~~vIiDE 133 (200)
T d1wp9a1 126 VSLIVFDE 133 (200)
T ss_dssp CSEEEEET
T ss_pred cceEEEEe
Confidence 77777644
No 256
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=52.89 E-value=4.5 Score=31.31 Aligned_cols=29 Identities=21% Similarity=0.275 Sum_probs=22.9
Q ss_pred HHHHhhhhhhhCCCcEEEeCCCCCchhHH
Q 015093 65 AIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93 (413)
Q Consensus 65 ~~Q~~~~~~~~~~~~~lv~~~tGsGKT~~ 93 (413)
....+.+..+++|+..++.|+.|.|||..
T Consensus 83 ~~g~~~L~~~l~~kt~~~~G~SGVGKSTL 111 (225)
T d1u0la2 83 GMGIEELKEYLKGKISTMAGLSGVGKSSL 111 (225)
T ss_dssp CTTHHHHHHHHSSSEEEEECSTTSSHHHH
T ss_pred chhHhhHHHHhcCCeEEEECCCCCCHHHH
Confidence 34456666777889999999999999954
No 257
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=52.71 E-value=42 Score=25.59 Aligned_cols=98 Identities=12% Similarity=0.075 Sum_probs=55.9
Q ss_pred CCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHh-----cCC
Q 015093 85 QSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILS-----AGV 159 (413)
Q Consensus 85 ~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 159 (413)
...|||.... .-++..+.. .+.+++|.|....-..-....+.+. .+..+..++|+.+.......+. ...
T Consensus 65 ~~~S~K~~~l-~~~l~~~~~--~g~kviIFs~~~~~~~~l~~~l~~~---~~~~~~~i~G~~~~~~R~~~i~~F~~~~~~ 138 (244)
T d1z5za1 65 VRRSGKMIRT-MEIIEEALD--EGDKIAIFTQFVDMGKIIRNIIEKE---LNTEVPFLYGELSKKERDDIISKFQNNPSV 138 (244)
T ss_dssp STTCHHHHHH-HHHHHHHHH--TTCCEEEEESCHHHHHHHHHHHHHH---HCSCCCEECTTSCHHHHHHHHHHHHHCTTC
T ss_pred hhhhhHHHHH-HHHHHhhcc--cccceEEEeeceehHHHHHHHHHhh---ccceEEEEecccchhccchhhhhhhccccc
Confidence 4568887553 333333222 2448899998887665444444332 2566777888887655443332 245
Q ss_pred cEEEeChHHHHHHHHcCCCCCCCccEEEEccchh
Q 015093 160 HVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADE 193 (413)
Q Consensus 160 ~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~ 193 (413)
.++++++.. ...++.+...+.+|+=+.+.
T Consensus 139 ~vll~~~~~-----~g~Glnl~~a~~vi~~~~~w 167 (244)
T d1z5za1 139 KFIVLSVKA-----GGFGINLTSANRVIHFDRWW 167 (244)
T ss_dssp CEEEEECCT-----TCCCCCCTTCSEEEECSCCS
T ss_pred hhccccccc-----cccccccchhhhhhhcCchh
Confidence 678777543 22345566566666555553
No 258
>d2b2na1 c.37.1.19 (A:26-333) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=51.92 E-value=12 Score=30.38 Aligned_cols=60 Identities=10% Similarity=0.138 Sum_probs=37.5
Q ss_pred eeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECC-----------cch-HHH----HHHHhcCCcEEEeChHHHHH
Q 015093 109 CQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGG-----------TSV-RED----QRILSAGVHVVVGTPGRVFD 171 (413)
Q Consensus 109 ~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~-----------~~~-~~~----~~~~~~~~~Iii~T~~~l~~ 171 (413)
..+++|||+...+.++++.++.+.. ..+..+-+- ... ..+ ......+..|+|+|...+..
T Consensus 15 ~p~lvv~~~~~~A~~l~~~L~~~~~---~~v~~fP~~e~lpyd~~s~~~~i~~~R~~~L~~l~~~~~~iiits~~al~~ 90 (308)
T d2b2na1 15 GPVVLIAPDMQNALRLHDEISQFTD---QMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQ 90 (308)
T ss_dssp SCEEEEESSHHHHHHHHHHHHTTCS---SCEEECCCCCSCTTCSSCCCHHHHHHHHHHHHHGGGCCSSEEEEEHHHHTB
T ss_pred CCEEEEcCCHHHHHHHHHHHHhcCC---CceEEcCCcccCccccCCCChHHHHHHHHHHHHHhhcCCceEEeechhhhh
Confidence 3799999999999999999987653 233322211 111 111 12223466899999887753
No 259
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.50 E-value=3 Score=32.53 Aligned_cols=16 Identities=13% Similarity=0.194 Sum_probs=13.7
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
-++|.|+.|||||...
T Consensus 4 ~IviEG~~GsGKST~~ 19 (241)
T d2ocpa1 4 RLSIEGNIAVGKSTFV 19 (241)
T ss_dssp EEEEEECTTSSHHHHH
T ss_pred EEEEECCCCCcHHHHH
Confidence 4788999999999764
No 260
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=50.43 E-value=7.3 Score=29.25 Aligned_cols=15 Identities=20% Similarity=0.397 Sum_probs=12.9
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+.|.|.-|||||+..
T Consensus 3 I~ieG~dGsGKST~~ 17 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLV 17 (208)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 578999999999765
No 261
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=49.89 E-value=3.8 Score=29.17 Aligned_cols=15 Identities=20% Similarity=0.406 Sum_probs=13.0
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|++|+|||...
T Consensus 3 ivlvG~~~vGKSsLi 17 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTIL 17 (160)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 789999999999654
No 262
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=49.80 E-value=17 Score=24.41 Aligned_cols=50 Identities=8% Similarity=0.032 Sum_probs=35.0
Q ss_pred CcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEE
Q 015093 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335 (413)
Q Consensus 280 ~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~ 335 (413)
.++||.-.....++.++..|.+.|+.+...+.+ ++.++.+.....++++.
T Consensus 3 p~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~------~~al~~l~~~~~dlii~ 52 (121)
T d1xhfa1 3 PHILIVEDELVTRNTLKSIFEAEGYDVFEATDG------AEMHQILSEYDINLVIM 52 (121)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCEEEEESSH------HHHHHHHHHSCCSEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCh------HHHHHHHHhcCCCEEEe
Confidence 367777788888888888888888877766544 34455555566666655
No 263
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=49.77 E-value=10 Score=30.33 Aligned_cols=55 Identities=20% Similarity=0.160 Sum_probs=41.6
Q ss_pred ceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCCcEEEeCh
Q 015093 108 QCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTP 166 (413)
Q Consensus 108 ~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iii~T~ 166 (413)
+.++++.|+++.-+..+.+.+++. +..+..++++...............++++|.
T Consensus 178 ~~~~lvf~~~~~~~~~l~~~L~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~lvaT~ 232 (305)
T d2bmfa2 178 KGKTVWFVPSIKAGNDIAACLRKN----GKKVIQLSRKTFDSEYIKTRTNDWDFVVTTD 232 (305)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHH----TCCCEECCTTCHHHHGGGGGTSCCSEEEECG
T ss_pred CCCEEEEeccHHHHHHHHHHHHhC----CCCEEEeCCcChHHHHhhhhccchhhhhhhH
Confidence 347999999999999888888775 5566777887765554445556778999994
No 264
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}
Probab=49.66 E-value=14 Score=24.90 Aligned_cols=31 Identities=10% Similarity=0.110 Sum_probs=17.9
Q ss_pred cEEEEEcCcccHHHHHHHHhhCCCeeEeecC
Q 015093 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHG 311 (413)
Q Consensus 281 ~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~ 311 (413)
++||.=......+.+...|++.|+.+....+
T Consensus 4 rILiVDDd~~~~~~l~~~L~~~g~~v~~a~~ 34 (121)
T d1mvoa_ 4 KILVVDDEESIVTLLQYNLERSGYDVITASD 34 (121)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCEEEEECC
Confidence 4555555555666666666666665554443
No 265
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=49.05 E-value=4.4 Score=32.72 Aligned_cols=15 Identities=20% Similarity=0.344 Sum_probs=10.0
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+-|+|++|||||...
T Consensus 7 IgIaG~SGSGKTTva 21 (288)
T d1a7ja_ 7 ISVTGSSGAGTSTVK 21 (288)
T ss_dssp EEEESCC---CCTHH
T ss_pred EEEECCCCCcHHHHH
Confidence 678999999999765
No 266
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=48.94 E-value=6 Score=29.88 Aligned_cols=17 Identities=18% Similarity=-0.003 Sum_probs=14.5
Q ss_pred CcEEEeCCCCCchhHHH
Q 015093 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~ 94 (413)
+.+++.||+++|||..+
T Consensus 54 n~i~~~GP~~TGKS~f~ 70 (205)
T d1tuea_ 54 NCLVFCGPANTGKSYFG 70 (205)
T ss_dssp SEEEEESCGGGCHHHHH
T ss_pred eEEEEECCCCccHHHHH
Confidence 45889999999999765
No 267
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=48.74 E-value=4.1 Score=29.43 Aligned_cols=15 Identities=20% Similarity=0.321 Sum_probs=13.0
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+++.|++|+|||..
T Consensus 4 ki~ivG~~~~GKTsL 18 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTI 18 (165)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 389999999999954
No 268
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=48.22 E-value=3.8 Score=33.74 Aligned_cols=16 Identities=25% Similarity=0.383 Sum_probs=13.4
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
-.++.|+.|+|||...
T Consensus 25 ~~vi~G~NgsGKTtil 40 (369)
T g1ii8.1 25 INLIIGQNGSGKSSLL 40 (369)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 4688999999999754
No 269
>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=48.15 E-value=4.9 Score=26.26 Aligned_cols=37 Identities=8% Similarity=0.072 Sum_probs=30.7
Q ss_pred cCCCcEEEEEcCcccHHHHHHHHhhCCC-eeEeecCCC
Q 015093 277 LAITQSVIFVNTRRKVDWLTDQMRSRDH-TVSATHGDM 313 (413)
Q Consensus 277 ~~~~~~lIf~~~~~~a~~l~~~l~~~~~-~~~~~~~~~ 313 (413)
....+++++|++-..+...+..|.+.|+ ++..+.|++
T Consensus 56 ~~~~~vv~~~~~g~~s~~~~~~l~~~G~~nV~~l~GG~ 93 (101)
T d1yt8a2 56 RRDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGL 93 (101)
T ss_dssp CTTSCEEEECSSSSHHHHHHHHHHHTTCSSEEEETTHH
T ss_pred ccCceeeeccchhhhHHHHHHHHHHcCCCcEEEeCChH
Confidence 3456889999999999999999999998 477778875
No 270
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=47.79 E-value=6.2 Score=31.57 Aligned_cols=26 Identities=31% Similarity=0.363 Sum_probs=20.0
Q ss_pred hhhCCCcEEEeCCCCCchhHHHHHHH
Q 015093 73 PFCKGLDVIQQAQSGTGKTATFCSGI 98 (413)
Q Consensus 73 ~~~~~~~~lv~~~tGsGKT~~~~~~i 98 (413)
.+-+|+...|.++.|+|||......+
T Consensus 63 pig~GQr~~Ifg~~g~GKt~l~~~~~ 88 (276)
T d1fx0a3 63 PVGRGQRELIIGDRQTGKTAVATDTI 88 (276)
T ss_dssp CCBTTCBCBEEESSSSSHHHHHHHHH
T ss_pred cccCCceEeeccCCCCChHHHHHHHH
Confidence 34568889999999999997654433
No 271
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=47.77 E-value=21 Score=24.01 Aligned_cols=104 Identities=11% Similarity=0.003 Sum_probs=49.4
Q ss_pred CccccHHHHHHHHHHhcCCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhc--CCCeEEEEeCc
Q 015093 261 DKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRS--GSSRVLITTDL 338 (413)
Q Consensus 261 ~~~~~~~~~l~~~~~~~~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~--~~~~vli~t~~ 338 (413)
+........+...++.. +--+..+.+-.+|- +.+++..+.+..+.-.|+..+--+..+.+++ ....|++.|..
T Consensus 8 DD~~~~~~~l~~~L~~~--g~~v~~a~~~~eal---~~~~~~~~dlvl~D~~mP~~~G~el~~~ir~~~~~~piI~lt~~ 82 (121)
T d1ys7a2 8 DDDSDVLASLERGLRLS--GFEVATAVDGAEAL---RSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSAR 82 (121)
T ss_dssp CSCHHHHHHHHHHHHHT--TCEEEEESSHHHHH---HHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECC
T ss_pred ECCHHHHHHHHHHHHHC--CCEEEEECCHHHHH---HHHHhCCCCEEEEEeeccCcccHHHHHHHHhcCCCCEEEEEEee
Confidence 33344455555566553 22333444433333 3444555666666665554433444444432 34566666643
Q ss_pred -----cccCCCCCCCCEEEEcCCCCChhHHHhhhcccCC
Q 015093 339 -----LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGR 372 (413)
Q Consensus 339 -----~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R 372 (413)
..++++....++ ..-|.+..++..++-|+.|
T Consensus 83 ~~~~~~~~a~~~Ga~dy---l~KP~~~~~L~~~i~~~l~ 118 (121)
T d1ys7a2 83 SSVDDRVAGLEAGADDY---LVKPFVLAELVARVKALLR 118 (121)
T ss_dssp CTTTCCCTTTTTTCSEE---EESSCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCEE---EECCCCHHHHHHHHHHHHH
Confidence 223333322222 2346777777666655443
No 272
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=47.38 E-value=13 Score=29.77 Aligned_cols=37 Identities=19% Similarity=0.345 Sum_probs=30.1
Q ss_pred ceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcch
Q 015093 108 QCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSV 148 (413)
Q Consensus 108 ~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (413)
+.++||.|+++..+++..+.+++. ++++..++++.+.
T Consensus 36 ggk~LVFcnSR~~aE~La~~L~~~----Gi~a~~~Hgglsq 72 (299)
T d1a1va2 36 GGRHLIFCHSKKKCDELAAKLVAL----GINAVAYYRGLDV 72 (299)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHT----TCCEEEECTTSCG
T ss_pred CCCEEEECCcHHHHHHHHHHHHHC----CCCEEEEeCCchH
Confidence 348999999999999999888775 6777788877653
No 273
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=46.55 E-value=18 Score=24.28 Aligned_cols=49 Identities=2% Similarity=0.036 Sum_probs=30.4
Q ss_pred cEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEE
Q 015093 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335 (413)
Q Consensus 281 ~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~ 335 (413)
|+||.=.+....+.+...|+..|+.+...+++ ++.++.+++...+++++
T Consensus 2 kILiVDD~~~~~~~l~~~L~~~g~~v~~a~~~------~~al~~l~~~~~dlil~ 50 (121)
T d1zesa1 2 RILVVEDEAPIREMVCFVLEQNGFQPVEAEDY------DSAVNQLNEPWPDLILL 50 (121)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEECSH------HHHHHHSSSSCCSEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCEEEEECCh------HHHHHHHHccCCCEEEe
Confidence 56677777777777777777777776655543 34455555555554443
No 274
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=46.30 E-value=14 Score=29.20 Aligned_cols=43 Identities=14% Similarity=0.202 Sum_probs=28.4
Q ss_pred HHHHHHHhCCCCCCcHHHHhhhhhhhCC----Cc-EEEeCCCCCchhHHH
Q 015093 50 NLLRGIYAYGFEKPSAIQQRGIVPFCKG----LD-VIQQAQSGTGKTATF 94 (413)
Q Consensus 50 ~~~~~l~~~~~~~~~~~Q~~~~~~~~~~----~~-~lv~~~tGsGKT~~~ 94 (413)
++.+.++-.++ .|..++. ++..++.+ ++ +++.||.++|||..+
T Consensus 74 ~i~~~l~~q~~-~~~~f~~-~l~~~L~~~~~k~n~~~l~G~~~tGKS~f~ 121 (267)
T d1u0ja_ 74 RIYKILELNGY-DPQYAAS-VFLGWATKKFGKRNTIWLFGPATTGKTNIA 121 (267)
T ss_dssp HHHHHHHHTTC-CHHHHHH-HHHHHHTTCSTTCCEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHcCc-CHHHHHH-HHHHHHcCCCCccEEEEEEcCCCCCHHHHH
Confidence 46666766665 4556665 45555543 23 788999999999654
No 275
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=46.01 E-value=3.7 Score=33.35 Aligned_cols=14 Identities=21% Similarity=0.394 Sum_probs=0.0
Q ss_pred EEeCCCCCchhHHH
Q 015093 81 IQQAQSGTGKTATF 94 (413)
Q Consensus 81 lv~~~tGsGKT~~~ 94 (413)
+++||.|+|||.+.
T Consensus 28 vlvG~NgsGKS~iL 41 (308)
T d1e69a_ 28 AIVGPNGSGKSNII 41 (308)
T ss_dssp EEECCTTTCSTHHH
T ss_pred EEECCCCCcHHHHH
No 276
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=45.39 E-value=18 Score=24.24 Aligned_cols=31 Identities=6% Similarity=-0.021 Sum_probs=18.9
Q ss_pred CcEEEEEcCcccHHHHHHHHhhCCCeeEeec
Q 015093 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATH 310 (413)
Q Consensus 280 ~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~ 310 (413)
+|+||.=........+.+.|...|+.+....
T Consensus 2 krILvVDD~~~~~~~l~~~L~~~g~~v~~a~ 32 (119)
T d1peya_ 2 EKILIVDDQSGIRILLNEVFNKEGYQTFQAA 32 (119)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEES
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCEEEEeC
Confidence 4566666666666666666666666655433
No 277
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=45.22 E-value=7.7 Score=30.63 Aligned_cols=32 Identities=19% Similarity=0.100 Sum_probs=20.6
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEE
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVL 114 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl 114 (413)
+.|.+.=|.|||.++...+...... +.+++++
T Consensus 4 Iai~gKGGvGKTT~a~nLA~~LA~~---G~rVllI 35 (269)
T d1cp2a_ 4 VAIYGKGGIGKSTTTQNLTSGLHAM---GKTIMVV 35 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTT---TCCEEEE
T ss_pred EEEECCCcCCHHHHHHHHHHHHHhC---CCcEEEE
Confidence 4567888999999886655544322 3355554
No 278
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=44.98 E-value=6.1 Score=29.02 Aligned_cols=14 Identities=29% Similarity=0.508 Sum_probs=12.8
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|++|+|||..
T Consensus 20 I~lvG~~~vGKTsL 33 (182)
T d1moza_ 20 ILILGLDGAGKTTI 33 (182)
T ss_dssp EEEEEETTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 89999999999964
No 279
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=44.88 E-value=5.2 Score=28.39 Aligned_cols=16 Identities=19% Similarity=0.312 Sum_probs=13.4
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
.+++.|++|+|||...
T Consensus 2 KI~liG~~nvGKSSLl 17 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLL 17 (166)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999543
No 280
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=44.62 E-value=3.8 Score=30.06 Aligned_cols=15 Identities=20% Similarity=0.295 Sum_probs=13.3
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+++.|++|+|||..
T Consensus 15 kI~lvG~~~vGKTsL 29 (186)
T d1f6ba_ 15 KLVFLGLDNAGKTTL 29 (186)
T ss_dssp EEEEEEETTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 499999999999954
No 281
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=44.28 E-value=4.9 Score=31.22 Aligned_cols=15 Identities=20% Similarity=0.288 Sum_probs=13.0
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+-+.|+.|||||+++
T Consensus 4 IgiTG~igSGKsTva 18 (241)
T d1deka_ 4 IFLSGVKRSGKDTTA 18 (241)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 567899999999876
No 282
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=43.96 E-value=5.3 Score=28.98 Aligned_cols=15 Identities=27% Similarity=0.426 Sum_probs=13.0
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|++|+|||...
T Consensus 8 i~vvG~~~vGKTsLi 22 (169)
T d3raba_ 8 ILIIGNSSVGKTSFL 22 (169)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 899999999999543
No 283
>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=43.31 E-value=12 Score=25.97 Aligned_cols=36 Identities=14% Similarity=0.075 Sum_probs=30.3
Q ss_pred CCCcEEEEEcCcccHHHHHHHHhhCCC-e-eEeecCCC
Q 015093 278 AITQSVIFVNTRRKVDWLTDQMRSRDH-T-VSATHGDM 313 (413)
Q Consensus 278 ~~~~~lIf~~~~~~a~~l~~~l~~~~~-~-~~~~~~~~ 313 (413)
+..+++++|.+-..+...+..|.+.|+ + +..+.|++
T Consensus 79 ~~~~iV~~C~~g~rs~~aa~~L~~~G~~~~V~~L~GG~ 116 (136)
T d1yt8a1 79 PRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGT 116 (136)
T ss_dssp TTSEEEEECSSSHHHHHHHHHHHHTTCSSCEEEETTHH
T ss_pred ccceEEEEcCCCCchHHHHHHHHHcCCCceEEEeCCcH
Confidence 445799999999899999999999998 3 77788884
No 284
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=42.97 E-value=5.6 Score=28.88 Aligned_cols=14 Identities=21% Similarity=0.387 Sum_probs=12.4
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+.+.|++|+|||..
T Consensus 3 V~liG~~n~GKSsL 16 (171)
T d1mkya1 3 VLIVGRPNVGKSTL 16 (171)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 68999999999954
No 285
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=42.84 E-value=5.5 Score=29.95 Aligned_cols=15 Identities=27% Similarity=0.446 Sum_probs=13.0
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+++.|++|+|||..
T Consensus 5 ~V~lvG~~n~GKTSL 19 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSL 19 (209)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 389999999999964
No 286
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=42.54 E-value=5.5 Score=37.41 Aligned_cols=57 Identities=11% Similarity=0.161 Sum_probs=32.8
Q ss_pred ccCccCCC-CCHHHHHHHHhCCCC--CCcHH--HHhhhhhhhC---CCcEEEeCCCCCchhHHHH
Q 015093 39 YDSFDSMG-LKENLLRGIYAYGFE--KPSAI--QQRGIVPFCK---GLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 39 ~~~~~~~~-l~~~~~~~l~~~~~~--~~~~~--Q~~~~~~~~~---~~~~lv~~~tGsGKT~~~~ 95 (413)
.+++..++ .++............ .|..+ =..|+..+.. ++.+|+.|..|||||.+.=
T Consensus 77 vNPyk~l~ly~~~~~~~y~~~~~~~~pPHifaiA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K 141 (794)
T d2mysa2 77 VNPYKWLPVYNPKVVLAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTK 141 (794)
T ss_dssp ECCSSCCGGGCTTHHHHTTTCCTTSSCSCHHHHHHHHHHHHHHHTCCEEEEEEECTTSCHHHHHH
T ss_pred ECCCCCCCCCCHHHHHHHcCCCCCCCCCcHHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHH
Confidence 35555554 244444444433322 23332 3356666553 3459999999999998763
No 287
>d1em8a_ c.128.1.1 (A:) DNA polymerase III chi subunit {Escherichia coli [TaxId: 562]}
Probab=42.36 E-value=34 Score=23.89 Aligned_cols=76 Identities=12% Similarity=0.159 Sum_probs=44.9
Q ss_pred HHHHHHHhc--CCCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeCccccCCCCC
Q 015093 269 TLCDLYETL--AITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQ 346 (413)
Q Consensus 269 ~l~~~~~~~--~~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~d~~ 346 (413)
.+..++++. .+.+++|+|++.+.++.+-+.|-.......+-|+-.+.. ......|++++... -..+
T Consensus 24 ~~crL~~K~~~~g~ri~I~~~d~~~~~~lD~~LWt~~~~sFiPH~~~~~~---------~~~~~PI~l~~~~~---~~~~ 91 (147)
T d1em8a_ 24 LVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEG---------PRGGAPVEIAWPQK---RSSS 91 (147)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHCSTTCCCCEEETTCS---------STTCCSEEEECTTS---CCCS
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhCCCCcccccccccCCC---------ccCCCCEEecCCCC---CCCc
Confidence 344455443 567999999999999999999976533333333321100 11245688887532 1123
Q ss_pred CCCEEEEcCC
Q 015093 347 QVSLVINYDL 356 (413)
Q Consensus 347 ~~~~vi~~~~ 356 (413)
..+.+|+.+.
T Consensus 92 ~~dvlinl~~ 101 (147)
T d1em8a_ 92 RRDILISLRT 101 (147)
T ss_dssp CCSEEEECCS
T ss_pred cceEEEECCC
Confidence 4566777654
No 288
>d1ozbi_ g.74.1.1 (I:) Preprotein translocase SecA C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=42.20 E-value=3.3 Score=19.28 Aligned_cols=8 Identities=38% Similarity=0.767 Sum_probs=6.2
Q ss_pred CCCCCchh
Q 015093 84 AQSGTGKT 91 (413)
Q Consensus 84 ~~tGsGKT 91 (413)
-|+||||.
T Consensus 7 CpCgSgkk 14 (26)
T d1ozbi_ 7 CPCGSGKK 14 (26)
T ss_dssp CTTTCSSB
T ss_pred CCCCCCcc
Confidence 37889986
No 289
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.89 E-value=5.9 Score=29.22 Aligned_cols=14 Identities=36% Similarity=0.565 Sum_probs=12.6
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|++|+|||..
T Consensus 8 i~ivG~~~vGKTsL 21 (186)
T d2f7sa1 8 LLALGDSGVGKTTF 21 (186)
T ss_dssp EEEESCTTSSHHHH
T ss_pred EEEECCCCcCHHHH
Confidence 78999999999964
No 290
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=41.43 E-value=11 Score=28.80 Aligned_cols=31 Identities=23% Similarity=0.244 Sum_probs=19.6
Q ss_pred EEeCCCCCchhHHHHHHHHHhcccccCceeEEEE
Q 015093 81 IQQAQSGTGKTATFCSGILQQLDYESLQCQALVL 114 (413)
Q Consensus 81 lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl 114 (413)
+..+.-|.|||.++.-.+.... .. +.+++++
T Consensus 7 v~~~kGGvGKTtia~nLA~~la--~~-g~~Vlli 37 (237)
T d1g3qa_ 7 IVSGKGGTGKTTVTANLSVALG--DR-GRKVLAV 37 (237)
T ss_dssp EECSSTTSSHHHHHHHHHHHHH--HT-TCCEEEE
T ss_pred EECCCCCCcHHHHHHHHHHHHH--hC-CCCEEEE
Confidence 4457789999988865554432 22 3366666
No 291
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=41.16 E-value=12 Score=28.37 Aligned_cols=32 Identities=16% Similarity=0.188 Sum_probs=20.6
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEE
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVL 114 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl 114 (413)
.+..+.-|.|||.++...+.... .. +.+++++
T Consensus 5 av~s~KGGvGKTtia~nlA~~la--~~-g~~Vlli 36 (232)
T d1hyqa_ 5 TVASGKGGTGKTTITANLGVALA--QL-GHDVTIV 36 (232)
T ss_dssp EEEESSSCSCHHHHHHHHHHHHH--HT-TCCEEEE
T ss_pred EEECCCCCChHHHHHHHHHHHHH--hC-CCCEEEE
Confidence 45668899999988865554432 22 3466665
No 292
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.09 E-value=6.3 Score=28.67 Aligned_cols=14 Identities=29% Similarity=0.456 Sum_probs=12.5
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|+.|+|||..
T Consensus 6 ivvvG~~~vGKTsl 19 (173)
T d2a5ja1 6 YIIIGDTGVGKSCL 19 (173)
T ss_dssp EEEESSTTSSHHHH
T ss_pred EEEECCCCcCHHHH
Confidence 78999999999954
No 293
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=40.89 E-value=26 Score=23.43 Aligned_cols=26 Identities=8% Similarity=-0.046 Sum_probs=11.1
Q ss_pred hhCCCeeEeecCCCCHHHHHHHHHHH
Q 015093 300 RSRDHTVSATHGDMDQNSRDIIMREF 325 (413)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~r~~~~~~f 325 (413)
.+..+.+..+.-.|+..+-.+.+..+
T Consensus 42 ~~~~~dlillD~~mp~~~g~~~~~~l 67 (122)
T d1kgsa2 42 LNEPFDVVILDIMLPVHDGWEILKSM 67 (122)
T ss_dssp HHSCCSEEEEESCCSSSCHHHHHHHH
T ss_pred HhhCccccccccccccchhHHHHHHH
Confidence 34445555555444433333333333
No 294
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=40.45 E-value=9.5 Score=30.49 Aligned_cols=32 Identities=13% Similarity=0.181 Sum_probs=19.9
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEE
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVL 114 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl 114 (413)
+.|.+.=|.|||.++.-.+...... +.+++++
T Consensus 5 IaisgKGGVGKTT~a~NLA~~LA~~---G~rVLlI 36 (289)
T d2afhe1 5 CAIYGKGGIGKSTTTQNLVAALAEM---GKKVMIV 36 (289)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHT---TCCEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHC---CCCEEEE
Confidence 4567788999998876544433222 3366554
No 295
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=40.09 E-value=11 Score=27.88 Aligned_cols=45 Identities=16% Similarity=0.197 Sum_probs=26.3
Q ss_pred EEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHh
Q 015093 80 VIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRAL 131 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~ 131 (413)
++|.|+..||||.-+.. +... .++++|+......-..+.+++.+.
T Consensus 2 iLVtGGarSGKS~~AE~-----l~~~--~~~~~YiAT~~~~D~em~~RI~~H 46 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEA-----LIGD--APQVLYIATSQILDDEMAARIQHH 46 (180)
T ss_dssp EEEEECTTSSHHHHHHH-----HHCS--CSSEEEEECCCC------CHHHHH
T ss_pred EEEECCCCccHHHHHHH-----HHhc--CCCcEEEEccCCCCHHHHHHHHHH
Confidence 58999999999975532 2222 346788887776655666666554
No 296
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=39.87 E-value=5.5 Score=29.69 Aligned_cols=15 Identities=20% Similarity=0.401 Sum_probs=13.0
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+.+.|++|+|||..
T Consensus 25 ~I~lvG~~n~GKSTL 39 (195)
T d1svia_ 25 EIALAGRSNVGKSSF 39 (195)
T ss_dssp EEEEEEBTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 389999999999954
No 297
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=39.64 E-value=6.8 Score=28.16 Aligned_cols=15 Identities=20% Similarity=0.182 Sum_probs=12.8
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+++.|+.|+|||..
T Consensus 4 ki~i~G~~~~GKTsL 18 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTF 18 (164)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 378899999999954
No 298
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=39.62 E-value=6.9 Score=28.13 Aligned_cols=15 Identities=13% Similarity=0.370 Sum_probs=12.9
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|++|+|||...
T Consensus 5 v~liG~~~vGKSsLi 19 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMI 19 (164)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 789999999999543
No 299
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=39.48 E-value=6.8 Score=27.91 Aligned_cols=15 Identities=27% Similarity=0.468 Sum_probs=13.0
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.++++|.+|+|||..
T Consensus 7 kI~ivG~~~vGKSSL 21 (169)
T d1upta_ 7 RILILGLDGAGKTTI 21 (169)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 489999999999954
No 300
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=39.42 E-value=5.7 Score=31.41 Aligned_cols=16 Identities=25% Similarity=0.571 Sum_probs=13.8
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
.+++.|.||+|||...
T Consensus 34 ~I~LvG~tg~GKSSli 49 (257)
T d1h65a_ 34 TILVMGKGGVGKSSTV 49 (257)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCcHHHHH
Confidence 4899999999999653
No 301
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}
Probab=38.68 E-value=56 Score=23.17 Aligned_cols=44 Identities=16% Similarity=0.132 Sum_probs=28.3
Q ss_pred CCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHH
Q 015093 76 KGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEK 126 (413)
Q Consensus 76 ~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~ 126 (413)
++++++|.|.=|+||+.++.+ . ... ..++.|+.-+.+.+++..+
T Consensus 16 ~~~~vlIlGaGGaarai~~aL---~---~~g-~~~I~I~nR~~~ka~~L~~ 59 (167)
T d1npya1 16 KNAKVIVHGSGGMAKAVVAAF---K---NSG-FEKLKIYARNVKTGQYLAA 59 (167)
T ss_dssp TTSCEEEECSSTTHHHHHHHH---H---HTT-CCCEEEECSCHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHH---H---HCC-CCEEEEecccHHHHHHHHH
Confidence 467799999999999976532 1 111 2256666666666665443
No 302
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=38.63 E-value=25 Score=23.56 Aligned_cols=15 Identities=27% Similarity=0.337 Sum_probs=7.0
Q ss_pred CCChhHHHhhhcccC
Q 015093 357 PTQPENYLHRIGRSG 371 (413)
Q Consensus 357 ~~s~~~~~Q~~GR~~ 371 (413)
|.+...+.+++-++.
T Consensus 105 P~~~~~L~~~i~~~l 119 (123)
T d1mb3a_ 105 PISVVHFLETIKRLL 119 (123)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 444555544444443
No 303
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=38.37 E-value=6.2 Score=28.63 Aligned_cols=15 Identities=33% Similarity=0.384 Sum_probs=13.1
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+++.|.+|+|||..
T Consensus 17 kI~vvG~~~~GKSsL 31 (177)
T d1zj6a1 17 KVIIVGLDNAGKTTI 31 (177)
T ss_dssp EEEEEESTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 499999999999954
No 304
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.31 E-value=7.3 Score=28.15 Aligned_cols=15 Identities=27% Similarity=0.417 Sum_probs=12.8
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|+.|+|||...
T Consensus 5 i~lvG~~~vGKTsli 19 (168)
T d2atva1 5 LAIFGRAGVGKSALV 19 (168)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 789999999999543
No 305
>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}
Probab=38.20 E-value=51 Score=21.90 Aligned_cols=49 Identities=12% Similarity=0.045 Sum_probs=28.2
Q ss_pred cEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEE
Q 015093 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335 (413)
Q Consensus 281 ~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~ 335 (413)
++||.=......+.+.+.|+..|+.+...+++ ++.++.+.+...+++++
T Consensus 5 ~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~------~~al~~~~~~~~dlvi~ 53 (123)
T d1dbwa_ 5 TVHIVDDEEPVRKSLAFMLTMNGFAVKMHQSA------EAFLAFAPDVRNGVLVT 53 (123)
T ss_dssp EEEEEESSHHHHHHHHHHHHHTTCEEEEESCH------HHHHHHGGGCCSEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCEEEEECCH------HHHHHHHhhcCCcEEEE
Confidence 56666666666666777777766665544433 34445555555555443
No 306
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.01 E-value=8.5 Score=27.92 Aligned_cols=15 Identities=33% Similarity=0.563 Sum_probs=13.1
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|+.|+|||...
T Consensus 9 I~vvG~~~vGKSSli 23 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLM 23 (174)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 889999999999543
No 307
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.89 E-value=7.5 Score=27.86 Aligned_cols=15 Identities=33% Similarity=0.379 Sum_probs=13.0
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|..|+|||...
T Consensus 5 v~liG~~~vGKTsLl 19 (165)
T d1z06a1 5 IIVIGDSNVGKTCLT 19 (165)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 789999999999543
No 308
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.87 E-value=7.6 Score=28.26 Aligned_cols=15 Identities=33% Similarity=0.554 Sum_probs=13.1
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|+.|+|||...
T Consensus 7 i~vvG~~~vGKTsLi 21 (175)
T d2f9la1 7 VVLIGDSGVGKSNLL 21 (175)
T ss_dssp EEEESSTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 899999999999643
No 309
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=37.83 E-value=6.2 Score=28.92 Aligned_cols=16 Identities=25% Similarity=0.428 Sum_probs=13.3
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
.+++.|+||+|||...
T Consensus 2 ~I~lvG~~nvGKSsLi 17 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLI 17 (184)
T ss_dssp EEEEEEBTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999643
No 310
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=36.98 E-value=7.9 Score=28.23 Aligned_cols=15 Identities=20% Similarity=0.182 Sum_probs=12.9
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+.+.|.+|+|||..
T Consensus 7 ~I~lvG~~~~GKSSL 21 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTL 21 (178)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 388999999999954
No 311
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.95 E-value=6.8 Score=28.41 Aligned_cols=14 Identities=36% Similarity=0.558 Sum_probs=12.4
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|++|+|||..
T Consensus 6 i~vvG~~~vGKTsl 19 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTF 19 (170)
T ss_dssp EEEEECTTSSHHHH
T ss_pred EEEECCCCcCHHHH
Confidence 78999999999954
No 312
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=36.83 E-value=41 Score=24.91 Aligned_cols=75 Identities=19% Similarity=0.149 Sum_probs=44.2
Q ss_pred eeEEEEcccHHHHHHHHHHHHHhhccc--------------------------CceEEEEECCcchHHHHHH----HhcC
Q 015093 109 CQALVLAPTRELAQQIEKVMRALGDYM--------------------------GVKVHACVGGTSVREDQRI----LSAG 158 (413)
Q Consensus 109 ~~~lvl~P~~~l~~q~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~----~~~~ 158 (413)
..+||.||++.-+...+..+....... ...+.+.+++......... ....
T Consensus 41 ~~~LVF~~sRk~~~~~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~GIa~hh~~l~~~~r~~ie~~f~~g~ 120 (201)
T d2p6ra4 41 GGVLVFESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLNGQRRVVEDAFRRGN 120 (201)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHHHHTTCCCSSHHHHHHTTCCSHHHHHHHHHHHTTCCEECTTSCHHHHHHHHHHHHTTS
T ss_pred CcEEEEeCCHHHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhhhhhHHHHHHHhccHHHHHHHhhhhhHHHHHHHHhCCC
Confidence 378999999877777766665532211 0125667777665443322 2456
Q ss_pred CcEEEeChHHHHHHHHcCCCCCCCccEEEEc
Q 015093 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLD 189 (413)
Q Consensus 159 ~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiD 189 (413)
..|+|+|... ..+.++....+||.|
T Consensus 121 i~vlvaT~~l------~~Gin~p~~~vvi~~ 145 (201)
T d2p6ra4 121 IKVVVATPTL------AAGVNLPARRVIVRS 145 (201)
T ss_dssp CCEEEECSTT------TSSSCCCBSEEEECC
T ss_pred ceEEEechHH------HhhcCCCCceEEEec
Confidence 7899999432 345555555555543
No 313
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.72 E-value=7 Score=28.41 Aligned_cols=15 Identities=27% Similarity=0.521 Sum_probs=13.0
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|.+|+|||...
T Consensus 8 I~lvG~~~vGKTsll 22 (174)
T d2bmea1 8 FLVIGNAGTGKSCLL 22 (174)
T ss_dssp EEEEESTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 899999999999543
No 314
>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=36.69 E-value=38 Score=22.41 Aligned_cols=50 Identities=16% Similarity=0.120 Sum_probs=34.2
Q ss_pred CcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEE
Q 015093 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLIT 335 (413)
Q Consensus 280 ~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~ 335 (413)
.++||.=......+.+...|++.|+.+...+++ ++.++.+.+...++++.
T Consensus 2 ~rILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~------~~a~~~~~~~~~dliil 51 (120)
T d1zgza1 2 HHIVIVEDEPVTQARLQSYFTQEGYTVSVTASG------AGLREIMQNQSVDLILL 51 (120)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTCEEEEESSH------HHHHHHHHHSCCSEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCH------HHHHHHHHhcCCCEEee
Confidence 367777777788888888888888877665543 34445555566666655
No 315
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=36.57 E-value=11 Score=29.14 Aligned_cols=16 Identities=19% Similarity=0.113 Sum_probs=13.5
Q ss_pred CcEEEeCCCCCchhHH
Q 015093 78 LDVIQQAQSGTGKTAT 93 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~ 93 (413)
+-.+|.||.++|||..
T Consensus 42 ~~~iiTGpN~~GKSt~ 57 (234)
T d1wb9a2 42 RMLIITGPNMGGKSTY 57 (234)
T ss_dssp CEEEEECCTTSSHHHH
T ss_pred eEEEEeccCchhhHHH
Confidence 4489999999999954
No 316
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}
Probab=36.45 E-value=35 Score=22.63 Aligned_cols=27 Identities=15% Similarity=0.187 Sum_probs=11.9
Q ss_pred EEEEEcCcccHHHHHHHHhhCCCeeEe
Q 015093 282 SVIFVNTRRKVDWLTDQMRSRDHTVSA 308 (413)
Q Consensus 282 ~lIf~~~~~~a~~l~~~l~~~~~~~~~ 308 (413)
+||.=........+...|+..|+.+..
T Consensus 3 ILvVDDd~~~~~~l~~~L~~~G~~v~~ 29 (119)
T d2pl1a1 3 VLVVEDNALLRHHLKVQIQDAGHQVDD 29 (119)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHCCCEEEE
Confidence 333334444444444444444444433
No 317
>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}
Probab=36.26 E-value=73 Score=23.18 Aligned_cols=115 Identities=12% Similarity=0.189 Sum_probs=70.8
Q ss_pred cEEEEEcCcccHHHHHHHHhhC--CCeeEeecCCCCHHHHHHHHHHHhcCCCeEEEEeC----ccccCCCCCCCCEEEEc
Q 015093 281 QSVIFVNTRRKVDWLTDQMRSR--DHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTD----LLARGIDVQQVSLVINY 354 (413)
Q Consensus 281 ~~lIf~~~~~~a~~l~~~l~~~--~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~----~~~~G~d~~~~~~vi~~ 354 (413)
|.+.++......+.+.+...+. ..++..+.+++...- +.+-+....+..+++|+-. .+..-+|+| ||
T Consensus 2 p~i~~~~~srL~~l~~~i~~ey~~~~~i~v~~~~~e~av-~~~~~~~~~~~~DviISRG~ta~~ir~~~~iP----VV-- 74 (186)
T d2pjua1 2 PVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAV-TYIRKKLANERCDAIIAAGSNGAYLKSRLSVP----VI-- 74 (186)
T ss_dssp CEEEEECCHHHHHHHHHHHTTTTTTCEEEEECCCHHHHH-HHHHHHTTTSCCSEEEEEHHHHHHHHTTCSSC----EE--
T ss_pred CEEEEEEHHHHHHHHHHHHHHhcCCceEEeecCcHHHHH-HHHHHHHHcCCCCEEEECchHHHHHHHhCCCC----EE--
Confidence 3444444434333333333332 247778887765332 2233444567889999853 567778887 33
Q ss_pred CCCCChhHHHhhhcccCCCCCcceEEEEeccccHHHHHHHHHHhcccccc
Q 015093 355 DLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVIEE 404 (413)
Q Consensus 355 ~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (413)
..+.|.-++.|.+-++.+.+ ++.-++-.+.-......+.+.|+.++..
T Consensus 75 ~I~vs~~Dil~al~~a~~~~--~kiavV~~~~~~~~~~~~~~ll~~~i~~ 122 (186)
T d2pjua1 75 LIKPSGYDVLQFLAKAGKLT--SSIGVVTYQETIPALVAFQKTFNLRLDQ 122 (186)
T ss_dssp EECCCHHHHHHHHHHTTCTT--SCEEEEEESSCCHHHHHHHHHHTCCEEE
T ss_pred EEcCCHhHHHHHHHHHHHhC--CCEEEEeCCccchHHHHHHHHhCCceEE
Confidence 34577889999999997764 3444445555567788888888876543
No 318
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.00 E-value=56 Score=25.37 Aligned_cols=59 Identities=14% Similarity=0.128 Sum_probs=43.4
Q ss_pred CCcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHH-HHHHHHHh--cCCCeEEEEeC
Q 015093 279 ITQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSR-DIIMREFR--SGSSRVLITTD 337 (413)
Q Consensus 279 ~~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r-~~~~~~f~--~~~~~vli~t~ 337 (413)
+..+++.+.+.+.++.+.+.|++.+..+..+..+.+..+. ++..+.+. -|.+++||.--
T Consensus 28 g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNA 89 (275)
T d1wmaa1 28 SGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNA 89 (275)
T ss_dssp SSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECC
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 4578888888899999999999988888888888765443 33333333 27899999753
No 319
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.93 E-value=11 Score=27.01 Aligned_cols=16 Identities=31% Similarity=0.455 Sum_probs=13.4
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
.+++.|++|+|||...
T Consensus 5 Ki~lvG~~~vGKTsLi 20 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALT 20 (167)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 3799999999999543
No 320
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=35.90 E-value=7.3 Score=27.73 Aligned_cols=15 Identities=20% Similarity=0.432 Sum_probs=12.8
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+++.|++|+|||..
T Consensus 3 kI~lvG~~nvGKSsL 17 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSL 17 (161)
T ss_dssp EEEEEESTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 478999999999953
No 321
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=35.85 E-value=8.6 Score=27.86 Aligned_cols=15 Identities=20% Similarity=0.352 Sum_probs=13.1
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+++.|+.|+|||..
T Consensus 14 kIvlvG~~~vGKTSl 28 (173)
T d1e0sa_ 14 RILMLGLDAAGKTTI 28 (173)
T ss_dssp EEEEEEETTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 389999999999954
No 322
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.35 E-value=8.6 Score=27.72 Aligned_cols=14 Identities=29% Similarity=0.404 Sum_probs=12.5
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|.+|+|||..
T Consensus 5 i~viG~~~vGKTsL 18 (171)
T d2erxa1 5 VAVFGAGGVGKSSL 18 (171)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 78999999999954
No 323
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=35.25 E-value=8.7 Score=27.82 Aligned_cols=15 Identities=47% Similarity=0.618 Sum_probs=12.9
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|++|+|||...
T Consensus 5 i~~vG~~~vGKSsLi 19 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLM 19 (175)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 789999999999643
No 324
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=34.69 E-value=9.5 Score=31.35 Aligned_cols=15 Identities=40% Similarity=0.468 Sum_probs=13.1
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+.|.|+-|+|||...
T Consensus 7 I~IEG~iGsGKTTl~ 21 (329)
T d1e2ka_ 7 VYIDGPHGMGKTTTT 21 (329)
T ss_dssp EEECSCTTSSHHHHH
T ss_pred EEEECCcCCCHHHHH
Confidence 788999999999764
No 325
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.54 E-value=9.2 Score=27.58 Aligned_cols=15 Identities=20% Similarity=0.397 Sum_probs=12.9
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|..|+|||...
T Consensus 9 i~vvG~~~vGKTsLi 23 (170)
T d1r2qa_ 9 LVLLGESAVGKSSLV 23 (170)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 789999999999543
No 326
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.46 E-value=9.2 Score=27.42 Aligned_cols=14 Identities=29% Similarity=0.387 Sum_probs=12.5
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|..|+|||..
T Consensus 7 ivlvG~~~vGKTsl 20 (166)
T d1z0fa1 7 YIIIGDMGVGKSCL 20 (166)
T ss_dssp EEEECSTTSSHHHH
T ss_pred EEEECCCCcCHHHH
Confidence 78999999999954
No 327
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=34.39 E-value=69 Score=22.35 Aligned_cols=14 Identities=21% Similarity=0.385 Sum_probs=9.5
Q ss_pred CcEEEeCCCCC-chh
Q 015093 78 LDVIQQAQSGT-GKT 91 (413)
Q Consensus 78 ~~~lv~~~tGs-GKT 91 (413)
+++.|.|.||| |+.
T Consensus 3 K~I~IlGsTGSIG~~ 17 (150)
T d1r0ka2 3 RTVTVLGATGSIGHS 17 (150)
T ss_dssp EEEEEETTTSHHHHH
T ss_pred cEEEEECCCcHHHHH
Confidence 45777777776 554
No 328
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=34.31 E-value=5.4 Score=30.97 Aligned_cols=24 Identities=29% Similarity=0.512 Sum_probs=18.7
Q ss_pred hhhhhhCCCcEEEeCCCCCchhHH
Q 015093 70 GIVPFCKGLDVIQQAQSGTGKTAT 93 (413)
Q Consensus 70 ~~~~~~~~~~~lv~~~tGsGKT~~ 93 (413)
.+...++++..++.|+.|.|||..
T Consensus 90 ~L~~~l~~~~~vl~G~SGVGKSSL 113 (231)
T d1t9ha2 90 DIIPHFQDKTTVFAGQSGVGKSSL 113 (231)
T ss_dssp TTGGGGTTSEEEEEESHHHHHHHH
T ss_pred HHHHhhccceEEEECCCCccHHHH
Confidence 344455788889999999999954
No 329
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=34.24 E-value=8 Score=28.02 Aligned_cols=15 Identities=20% Similarity=0.322 Sum_probs=13.1
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+++.|+.|+|||..
T Consensus 18 kI~vvG~~~vGKSsL 32 (176)
T d1fzqa_ 18 RILLLGLDNAGKTTL 32 (176)
T ss_dssp EEEEEESTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 389999999999954
No 330
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.20 E-value=9.4 Score=27.53 Aligned_cols=14 Identities=43% Similarity=0.584 Sum_probs=12.7
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|+.|+|||..
T Consensus 9 i~vvG~~~vGKTsl 22 (170)
T d2g6ba1 9 VMLVGDSGVGKTCL 22 (170)
T ss_dssp EEEECSTTSSHHHH
T ss_pred EEEECCCCcCHHHH
Confidence 89999999999954
No 331
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=33.98 E-value=7.7 Score=28.34 Aligned_cols=16 Identities=25% Similarity=0.289 Sum_probs=13.2
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
++.+.|.+|+|||...
T Consensus 3 ~VaivG~~nvGKSTLi 18 (180)
T d1udxa2 3 DVGLVGYPNAGKSSLL 18 (180)
T ss_dssp SEEEECCGGGCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4788999999999653
No 332
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=33.91 E-value=31 Score=23.67 Aligned_cols=30 Identities=13% Similarity=0.180 Sum_probs=16.2
Q ss_pred cEEEEEcCcccHHHHHHHHhhCCCeeEeec
Q 015093 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATH 310 (413)
Q Consensus 281 ~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~ 310 (413)
|+||.=......+.+...|...|+.+....
T Consensus 3 rILiVDD~~~~~~~l~~~L~~~g~~v~~a~ 32 (139)
T d1w25a1 3 RILVVDDIEANVRLLEAKLTAEYYEVSTAM 32 (139)
T ss_dssp EEEEECSSTTHHHHHHHHHHHTTCEEEEES
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCEEEEEc
Confidence 455555555555555666655555544333
No 333
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.73 E-value=9.6 Score=27.45 Aligned_cols=14 Identities=36% Similarity=0.541 Sum_probs=12.3
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|+.|+|||..
T Consensus 4 i~lvG~~~vGKTsL 17 (168)
T d2gjsa1 4 VLLLGAPGVGKSAL 17 (168)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCcCHHHH
Confidence 78999999999953
No 334
>d1o5za1 c.59.1.2 (A:294-430) Folylpolyglutamate synthetase, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=33.68 E-value=43 Score=22.73 Aligned_cols=53 Identities=17% Similarity=0.164 Sum_probs=29.8
Q ss_pred cEEEEccchhhhccCcHHHHHHHHhhCCCCceEEEEeeeCChhHHHHHHHhcCCC
Q 015093 184 RMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKP 238 (413)
Q Consensus 184 ~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~~~~~~~~~ 238 (413)
..+|+|=||+..+ ....+..+....+....++.++.+...+...++..+....
T Consensus 11 ~~iilD~AHN~~a--~~~l~~~l~~~~~~~~~~~i~g~~~dkd~~~~l~~l~~~~ 63 (137)
T d1o5za1 11 KMYILDGAHNPHG--AESLVRSLKLYFNGEPLSLVIGILDDKNREDILRKYTGIF 63 (137)
T ss_dssp EEEEECCCCSHHH--HHHHHHHHHHHCTTCCEEEEECCCTTSCHHHHHGGGTTTC
T ss_pred CEEEEECCCCHHH--HHHHHHHHHhhhccccceeeecccccccHHHHHHHHHhhc
Confidence 4689999998532 2333444445555444455555555556655555554443
No 335
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=33.63 E-value=12 Score=30.03 Aligned_cols=29 Identities=28% Similarity=0.386 Sum_probs=21.5
Q ss_pred hhhhCCCcEEEeCCCCCchhHHHHHHHHH
Q 015093 72 VPFCKGLDVIQQAQSGTGKTATFCSGILQ 100 (413)
Q Consensus 72 ~~~~~~~~~lv~~~tGsGKT~~~~~~i~~ 100 (413)
..+.+|+...|.++.|.|||....-.+.+
T Consensus 63 ~pig~GQr~~If~~~g~GKt~ll~~~~~~ 91 (285)
T d2jdia3 63 VPIGRGQRELIIGDRQTGKTSIAIDTIIN 91 (285)
T ss_dssp SCCBTTCBCEEEESTTSSHHHHHHHHHHH
T ss_pred cCccCCCEEEeecCCCCChHHHHHHHHHh
Confidence 34556899999999999999765444433
No 336
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.39 E-value=9.8 Score=27.31 Aligned_cols=15 Identities=27% Similarity=0.359 Sum_probs=13.0
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|..|+|||...
T Consensus 6 ivlvG~~~vGKTsLi 20 (167)
T d1z08a1 6 VVLLGEGCVGKTSLV 20 (167)
T ss_dssp EEEECCTTSCHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 789999999999654
No 337
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.09 E-value=11 Score=27.30 Aligned_cols=16 Identities=19% Similarity=0.362 Sum_probs=13.3
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 4 KivvvG~~~vGKTsLi 19 (177)
T d1kmqa_ 4 KLVIVGDGACGKTCLL 19 (177)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 4789999999999553
No 338
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=32.94 E-value=9.8 Score=29.04 Aligned_cols=15 Identities=13% Similarity=0.308 Sum_probs=13.2
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+++.|..|+|||..
T Consensus 8 KilllG~~~vGKTsl 22 (221)
T d1azta2 8 RLLLLGAGESGKSTI 22 (221)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 489999999999954
No 339
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.52 E-value=10 Score=27.32 Aligned_cols=15 Identities=27% Similarity=0.457 Sum_probs=12.8
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|..|+|||...
T Consensus 7 i~lvG~~~vGKTsll 21 (169)
T d1x1ra1 7 LVVVGDGGVGKSALT 21 (169)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 788999999999553
No 340
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.49 E-value=7.9 Score=28.09 Aligned_cols=14 Identities=36% Similarity=0.574 Sum_probs=8.5
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|.+|+|||..
T Consensus 9 i~vvG~~~vGKTsL 22 (173)
T d2fu5c1 9 LLLIGDSGVGKTCV 22 (173)
T ss_dssp EEEECCCCC-----
T ss_pred EEEECCCCcCHHHH
Confidence 78999999999954
No 341
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=32.31 E-value=11 Score=27.60 Aligned_cols=15 Identities=27% Similarity=0.220 Sum_probs=12.8
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
++.+.|++++|||..
T Consensus 3 ~VaiiG~~nvGKSSL 17 (185)
T d1lnza2 3 DVGLVGFPSVGKSTL 17 (185)
T ss_dssp CEEEESSTTSSHHHH
T ss_pred eEEEECCCCCCHHHH
Confidence 478999999999964
No 342
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.21 E-value=9.1 Score=27.65 Aligned_cols=16 Identities=25% Similarity=0.383 Sum_probs=13.5
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
.+++.|..|+|||...
T Consensus 7 Ki~lvG~~~vGKTsLi 22 (171)
T d2erya1 7 RLVVVGGGGVGKSALT 22 (171)
T ss_dssp EEEEEECTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3899999999999653
No 343
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=32.20 E-value=11 Score=27.21 Aligned_cols=15 Identities=40% Similarity=0.567 Sum_probs=13.1
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+++.|..|+|||..
T Consensus 6 KivlvG~~~vGKTsl 20 (168)
T d1u8za_ 6 KVIMVGSGGVGKSAL 20 (168)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCcCHHHH
Confidence 489999999999964
No 344
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.14 E-value=9.1 Score=27.75 Aligned_cols=15 Identities=27% Similarity=0.474 Sum_probs=13.0
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+++.|..|+|||..
T Consensus 8 Kv~lvG~~~vGKTsL 22 (173)
T d2fn4a1 8 KLVVVGGGGVGKSAL 22 (173)
T ss_dssp EEEEEECTTSSHHHH
T ss_pred EEEEECCCCcCHHHH
Confidence 389999999999954
No 345
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=32.11 E-value=36 Score=26.13 Aligned_cols=74 Identities=18% Similarity=0.202 Sum_probs=40.7
Q ss_pred eeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCC-ccEEE
Q 015093 109 CQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDY-IRMFV 187 (413)
Q Consensus 109 ~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~-~~~iI 187 (413)
.++||.|+++.-++..++.++.. +.. .+..............+..+|+|+|... ......+++..+ +++||
T Consensus 26 ~~~iif~~~~~~~~~l~~~l~~~-----~hg-~~~~~~R~~~~~~f~~g~~~vLVaT~a~--~~v~~rGlDip~~v~~VI 97 (248)
T d1gkub2 26 TGGIIYARTGEEAEEIYESLKNK-----FRI-GIVTATKKGDYEKFVEGEIDHLIGTAHY--YGTLVRGLDLPERIRFAV 97 (248)
T ss_dssp SCEEEEESSHHHHHHHHHTTTTS-----SCE-EECTTSSSHHHHHHHHTSCSEEEEECC--------CCSCCTTTCCEEE
T ss_pred CCEEEEECCHHHHHHHHHHHHHh-----ccC-CCCHHHHHHHHHHHHhCCCeEEEEeccc--cchhhhccCccccccEEE
Confidence 46899999998887776665432 111 1111222222333446788999999531 112345666654 88888
Q ss_pred Ecc
Q 015093 188 LDE 190 (413)
Q Consensus 188 iDE 190 (413)
.=+
T Consensus 98 ~~d 100 (248)
T d1gkub2 98 FVG 100 (248)
T ss_dssp EES
T ss_pred EeC
Confidence 433
No 346
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.29 E-value=9.7 Score=27.28 Aligned_cols=14 Identities=29% Similarity=0.551 Sum_probs=12.5
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|+.|+|||..
T Consensus 5 i~vvG~~~vGKTSl 18 (166)
T d1g16a_ 5 ILLIGDSGVGKSCL 18 (166)
T ss_dssp EEEEESTTSSHHHH
T ss_pred EEEECCCCcCHHHH
Confidence 78999999999954
No 347
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.22 E-value=11 Score=26.95 Aligned_cols=15 Identities=27% Similarity=0.439 Sum_probs=12.9
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|..|+|||...
T Consensus 6 ivvvG~~~vGKTsli 20 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALT 20 (167)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 789999999999543
No 348
>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}
Probab=30.92 E-value=26 Score=24.39 Aligned_cols=47 Identities=9% Similarity=0.008 Sum_probs=34.1
Q ss_pred HHHHHHHHhc---CCCcEEEEEcCcccHHHHHHHHhhCCC-eeEeecCCCC
Q 015093 268 DTLCDLYETL---AITQSVIFVNTRRKVDWLTDQMRSRDH-TVSATHGDMD 314 (413)
Q Consensus 268 ~~l~~~~~~~---~~~~~lIf~~~~~~a~~l~~~l~~~~~-~~~~~~~~~~ 314 (413)
+.+..++... +..+++++|.+--.|...+-.|...|+ ++..|.|++.
T Consensus 77 ~~l~~~~~~~gi~~~~~iI~yC~sG~~A~~~~~~l~~lG~~~v~~YdGsw~ 127 (144)
T d1rhsa2 77 EELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWF 127 (144)
T ss_dssp HHHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHH
T ss_pred HHHHHHHHHcCCCCCCCEEEEecccchHHHHHHHHHHcCCCCCEEeCCCHH
Confidence 3445555443 556899999987778778888888888 5788888753
No 349
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.79 E-value=9.8 Score=28.21 Aligned_cols=14 Identities=29% Similarity=0.515 Sum_probs=12.6
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|+.|+|||..
T Consensus 9 ivvvG~~~vGKTsl 22 (194)
T d2bcgy1 9 LLLIGNSGVGKSCL 22 (194)
T ss_dssp EEEEESTTSSHHHH
T ss_pred EEEECCCCcCHHHH
Confidence 78999999999964
No 350
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.62 E-value=10 Score=27.07 Aligned_cols=15 Identities=20% Similarity=0.370 Sum_probs=12.8
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|..|+|||...
T Consensus 3 v~vvG~~~vGKTsLi 17 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLI 17 (164)
T ss_dssp EEEEESTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 788999999999543
No 351
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}
Probab=30.62 E-value=89 Score=22.48 Aligned_cols=79 Identities=19% Similarity=0.141 Sum_probs=43.0
Q ss_pred hCCCcEEEeCCC-CCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHH
Q 015093 75 CKGLDVIQQAQS-GTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQR 153 (413)
Q Consensus 75 ~~~~~~lv~~~t-GsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (413)
++|+.++|.+.+ |-|+-.+.. +... +.+++++.-+.+-..+..+.+.... ...+.... ........
T Consensus 21 l~gK~vlItGasgGIG~~ia~~------la~~--G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~d--~~~~~~~~ 87 (191)
T d1luaa1 21 VKGKKAVVLAGTGPVGMRSAAL------LAGE--GAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAE--TADDASRA 87 (191)
T ss_dssp CTTCEEEEETTTSHHHHHHHHH------HHHT--TCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEE--CCSHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHH------HHhh--ccchhhcccchHHHHHHHHHHHhcc---chhhhhhh--cccHHHHH
Confidence 468889998854 557664431 1111 4478888877777777777665533 22222221 11112222
Q ss_pred HHhcCCcEEEeCh
Q 015093 154 ILSAGVHVVVGTP 166 (413)
Q Consensus 154 ~~~~~~~Iii~T~ 166 (413)
..-.+.||+|.+.
T Consensus 88 ~~~~~iDilin~A 100 (191)
T d1luaa1 88 EAVKGAHFVFTAG 100 (191)
T ss_dssp HHTTTCSEEEECC
T ss_pred HHhcCcCeeeecC
Confidence 2335678888764
No 352
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.57 E-value=12 Score=27.11 Aligned_cols=14 Identities=29% Similarity=0.539 Sum_probs=12.5
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|..|+|||..
T Consensus 6 v~lvG~~~vGKTsL 19 (172)
T d2g3ya1 6 VVLIGEQGVGKSTL 19 (172)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCcCHHHH
Confidence 78999999999954
No 353
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.51 E-value=10 Score=27.35 Aligned_cols=14 Identities=29% Similarity=0.551 Sum_probs=12.5
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|+.|+|||..
T Consensus 8 i~lvG~~~vGKTsL 21 (171)
T d2ew1a1 8 IVLIGNAGVGKTCL 21 (171)
T ss_dssp EEEEESTTSSHHHH
T ss_pred EEEECCCCcCHHHH
Confidence 78999999999954
No 354
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.41 E-value=12 Score=26.85 Aligned_cols=15 Identities=27% Similarity=0.490 Sum_probs=12.9
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|..|+|||...
T Consensus 7 i~lvG~~~vGKTsli 21 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIM 21 (167)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 789999999999643
No 355
>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=30.41 E-value=21 Score=24.69 Aligned_cols=36 Identities=11% Similarity=0.017 Sum_probs=29.4
Q ss_pred CCCcEEEEEcCcccHHHHHHHHhhCCC-eeEeecCCC
Q 015093 278 AITQSVIFVNTRRKVDWLTDQMRSRDH-TVSATHGDM 313 (413)
Q Consensus 278 ~~~~~lIf~~~~~~a~~l~~~l~~~~~-~~~~~~~~~ 313 (413)
+..++++||.+-..+...+..|...|+ ++..|.|++
T Consensus 87 ~~~~vV~yC~~G~~a~~~~~~l~~~G~~~v~~ydGg~ 123 (136)
T d1e0ca2 87 PDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSW 123 (136)
T ss_dssp TTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHH
T ss_pred CCCceEEeCCChHHHHHHHHHHHHcCCCCcEEecCCH
Confidence 457899999988878888888998998 577788764
No 356
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.38 E-value=12 Score=26.90 Aligned_cols=14 Identities=14% Similarity=0.413 Sum_probs=12.4
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|..|+|||..
T Consensus 6 i~vvG~~~vGKTsL 19 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSI 19 (170)
T ss_dssp EEEECSTTSSHHHH
T ss_pred EEEECCCCcCHHHH
Confidence 78999999999954
No 357
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=30.36 E-value=12 Score=27.36 Aligned_cols=15 Identities=20% Similarity=0.293 Sum_probs=13.0
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+.+.|.+|+|||..
T Consensus 10 kV~iiG~~~~GKSTL 24 (186)
T d1mkya2 10 KVAIVGRPNVGKSTL 24 (186)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 488999999999954
No 358
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=29.96 E-value=12 Score=27.35 Aligned_cols=14 Identities=50% Similarity=0.624 Sum_probs=12.5
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|.+|+|||..
T Consensus 5 v~vvG~~~vGKSSL 18 (184)
T d1vg8a_ 5 VIILGDSGVGKTSL 18 (184)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCcCHHHH
Confidence 78999999999954
No 359
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=29.87 E-value=53 Score=21.92 Aligned_cols=28 Identities=14% Similarity=0.063 Sum_probs=12.7
Q ss_pred HHhhCCCeeEeecCCCCHHHHHHHHHHH
Q 015093 298 QMRSRDHTVSATHGDMDQNSRDIIMREF 325 (413)
Q Consensus 298 ~l~~~~~~~~~~~~~~~~~~r~~~~~~f 325 (413)
.+++..+.+..+.-.|+..+-.+.++.+
T Consensus 41 ~~~~~~~dliilD~~mp~~~G~~~~~~i 68 (128)
T d1yioa2 41 HRRPEQHGCLVLDMRMPGMSGIELQEQL 68 (128)
T ss_dssp HCCTTSCEEEEEESCCSSSCHHHHHHHH
T ss_pred HHHhcCCCEeehhhhcccchhHHHHHHH
Confidence 3444455555555554443333333333
No 360
>g1qtn.1 c.17.1.1 (A:,B:) Caspase-8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.60 E-value=58 Score=24.73 Aligned_cols=49 Identities=12% Similarity=0.108 Sum_probs=38.5
Q ss_pred CCCcEEEEEcCc---------------------ccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhc
Q 015093 278 AITQSVIFVNTR---------------------RKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRS 327 (413)
Q Consensus 278 ~~~~~lIf~~~~---------------------~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~ 327 (413)
+.|-+||+.+.. ..++.+++.|++.|+.+..+. +++..+-.+.+..|.+
T Consensus 10 prg~aLII~N~~y~~~~~~~~~~~~l~~r~ga~~Da~~l~~~l~~lGF~V~~~~-nlt~~~~~~~l~~~~~ 79 (242)
T g1qtn.1 10 PRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHD-DCTVEQIYEILKIYQL 79 (242)
T ss_dssp SCCEEEEEECCCCHHHHHHCGGGTTCCCCTTHHHHHHHHHHHHHHTTCEEEEEE-SCCHHHHHHHHHHHHH
T ss_pred CccEEEEEeccccCCcccccccccccccCCChHHHHHHHHHHHHHCCCEEEECc-CCCHHHHHHHHHHhhh
Confidence 446788888853 489999999999999876555 7888888888888863
No 361
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]}
Probab=29.43 E-value=45 Score=27.65 Aligned_cols=73 Identities=15% Similarity=0.148 Sum_probs=52.6
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEcCc----ccHHHHHHHHhhCCCeeEeecC---CCCHHHHHHHHHHHhcCCCeEEEEe
Q 015093 264 EWKLDTLCDLYETLAITQSVIFVNTR----RKVDWLTDQMRSRDHTVSATHG---DMDQNSRDIIMREFRSGSSRVLITT 336 (413)
Q Consensus 264 ~~~~~~l~~~~~~~~~~~~lIf~~~~----~~a~~l~~~l~~~~~~~~~~~~---~~~~~~r~~~~~~f~~~~~~vli~t 336 (413)
...+..+.+.++....+++||++... ...+.+.+.|++.++.+..+.+ .-+..+-.+..+.++..+.+++|+.
T Consensus 15 ~g~l~~l~~~l~~~G~k~~Livt~~~~~~~g~~~~v~~~L~~~gi~~~vf~~v~~~p~~~~v~~~~~~~~~~~~D~Iiai 94 (385)
T d1rrma_ 15 RGAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAI 94 (385)
T ss_dssp TTGGGGHHHHHHHHTCCEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cCHHHHHHHHHHHcCCCEEEEEECcchhhCcHHHHHHHHHHHcCCeEEEEcCccCCCCHHHHHHHhhhhhccCCCEEEec
Confidence 34667777888887767888887532 1346778888888988877665 3345667777888888888888874
No 362
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.19 E-value=12 Score=27.51 Aligned_cols=14 Identities=14% Similarity=0.330 Sum_probs=12.5
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|..|+|||..
T Consensus 5 ivllG~~~vGKTsl 18 (200)
T d1zcba2 5 ILLLGAGESGKSTF 18 (200)
T ss_dssp EEEECSTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 78999999999954
No 363
>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=29.04 E-value=1.1e+02 Score=22.97 Aligned_cols=120 Identities=12% Similarity=0.038 Sum_probs=65.9
Q ss_pred CcHHHHhhhhhhhC--CCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEE
Q 015093 63 PSAIQQRGIVPFCK--GLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVH 140 (413)
Q Consensus 63 ~~~~Q~~~~~~~~~--~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~ 140 (413)
..+.|-+.+..+.+ +-.-++...|+.|-|..++ ...+.. +.+++-+-.....+....+.+.+.+. .-+
T Consensus 43 ~~~~~g~~L~~L~~~~~~k~iLEiGT~~GyStl~l---a~al~~---~g~v~tie~~~~~~~~A~~~~~~~g~--~~~-- 112 (227)
T d1susa1 43 TSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLAT---ALAIPE---DGKILAMDINKENYELGLPVIKKAGV--DHK-- 112 (227)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCGGGHHHHHH---HHHSCT---TCEEEEEESCCHHHHHHHHHHHHTTC--GGG--
T ss_pred cCHHHHHHHHHHHHhcCCCcEEEecchhhhhHHHH---HhhCCC---CcEEEEEeccchhHHHHHHHHHHhcc--ccc--
Confidence 34556666666544 3448899999999997663 233322 23666666655555444444444321 112
Q ss_pred EEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEEccchhhhccCcHHHHHHHHhhCCCCc
Q 015093 141 ACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKI 214 (413)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~ 214 (413)
..++++.....+..+.........+++|.+|=.|.- +...+..+...++++-
T Consensus 113 ------------------i~~~~g~a~~~L~~l~~~~~~~~~fD~iFiDa~k~~----y~~~~e~~~~ll~~gG 164 (227)
T d1susa1 113 ------------------IDFREGPALPVLDEMIKDEKNHGSYDFIFVDADKDN----YLNYHKRLIDLVKVGG 164 (227)
T ss_dssp ------------------EEEEESCHHHHHHHHHHCGGGTTCBSEEEECSCSTT----HHHHHHHHHHHBCTTC
T ss_pred ------------------eeeeehHHHHHHHHHHhccccCCceeEEEeccchhh----hHHHHHHHHhhcCCCc
Confidence 345555555554444333222344789999965532 4455555566665544
No 364
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.95 E-value=13 Score=27.15 Aligned_cols=15 Identities=20% Similarity=0.355 Sum_probs=13.0
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|..|+|||...
T Consensus 8 ivviG~~~vGKTsli 22 (183)
T d1mh1a_ 8 CVVVGDGAVGKTCLL 22 (183)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 899999999999543
No 365
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.95 E-value=11 Score=26.92 Aligned_cols=15 Identities=27% Similarity=0.432 Sum_probs=12.9
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|+.|+|||...
T Consensus 6 i~viG~~~vGKTsli 20 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALT 20 (166)
T ss_dssp EEEEESTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 789999999999543
No 366
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=28.65 E-value=40 Score=23.14 Aligned_cols=14 Identities=14% Similarity=0.366 Sum_probs=7.4
Q ss_pred CCChhHHHhhhccc
Q 015093 357 PTQPENYLHRIGRS 370 (413)
Q Consensus 357 ~~s~~~~~Q~~GR~ 370 (413)
|.+...+.+++.|+
T Consensus 102 P~~~~~L~~~i~~~ 115 (140)
T d1qkka_ 102 PFAADRLVQSARRA 115 (140)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 45555555555444
No 367
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}
Probab=28.63 E-value=23 Score=25.49 Aligned_cols=48 Identities=17% Similarity=0.288 Sum_probs=32.0
Q ss_pred hCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHH
Q 015093 75 CKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRA 130 (413)
Q Consensus 75 ~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~ 130 (413)
.++++++|.|.=|++|+.++. +.. . +.++.++..+.+.+++..+.+..
T Consensus 16 ~~~k~vlIlGaGGaarai~~a---l~~---~--g~~i~I~nRt~~ka~~l~~~~~~ 63 (170)
T d1nyta1 16 RPGLRILLIGAGGASRGVLLP---LLS---L--DCAVTITNRTVSRAEELAKLFAH 63 (170)
T ss_dssp CTTCEEEEECCSHHHHHHHHH---HHH---T--TCEEEEECSSHHHHHHHHHHTGG
T ss_pred CCCCEEEEECCcHHHHHHHHH---hcc---c--ceEEEeccchHHHHHHHHHHHhh
Confidence 357889999999999997763 222 1 23666666666777665555443
No 368
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=28.48 E-value=11 Score=27.26 Aligned_cols=15 Identities=27% Similarity=0.461 Sum_probs=13.0
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+.+.|.+++|||..
T Consensus 18 ~I~lvG~~NvGKSSL 32 (188)
T d1puia_ 18 EVAFAGRSNAGKSSA 32 (188)
T ss_dssp EEEEEECTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 489999999999953
No 369
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.31 E-value=15 Score=26.69 Aligned_cols=15 Identities=33% Similarity=0.461 Sum_probs=12.9
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|..|+|||...
T Consensus 5 ivliG~~~vGKTsli 19 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALL 19 (179)
T ss_dssp EEEEESTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 789999999999553
No 370
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.35 E-value=12 Score=27.16 Aligned_cols=14 Identities=29% Similarity=0.577 Sum_probs=12.6
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|..|+|||..
T Consensus 10 i~vvG~~~vGKTsl 23 (177)
T d1x3sa1 10 ILIIGESGVGKSSL 23 (177)
T ss_dssp EEEECSTTSSHHHH
T ss_pred EEEECCCCcCHHHH
Confidence 78999999999954
No 371
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=27.17 E-value=16 Score=29.05 Aligned_cols=18 Identities=28% Similarity=0.172 Sum_probs=15.3
Q ss_pred CcEEEeCCCCCchhHHHH
Q 015093 78 LDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 78 ~~~lv~~~tGsGKT~~~~ 95 (413)
+++.+.|+.|+|||...-
T Consensus 7 Rni~i~gh~~~GKTtL~e 24 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTE 24 (276)
T ss_dssp EEEEEEECTTSCHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHH
Confidence 679999999999996553
No 372
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=27.16 E-value=14 Score=30.39 Aligned_cols=48 Identities=17% Similarity=0.168 Sum_probs=26.2
Q ss_pred EEEcCCCCChhHHHhhhcccCCCCCcceEEEEeccccHHHHHHHHHHhcccc
Q 015093 351 VINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLADIQRFYNVVI 402 (413)
Q Consensus 351 vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (413)
++.++...++..-...+.+.. +....+..+..+...+.+..+.++..+
T Consensus 284 ~~~ld~~~~~~~c~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~m 331 (333)
T d1p6xa_ 284 VFSADLSGTPRQCAAVVESLL----PLMSSTLSDFDSASALERAARTFNAEM 331 (333)
T ss_dssp EEEEECCSCHHHHHHHHHTTG----GGSCEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHhh----hcccccccCcccHHHHHHHHHHHHHhc
Confidence 344455456776666555543 333344455666666666666655543
No 373
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.07 E-value=16 Score=25.94 Aligned_cols=15 Identities=13% Similarity=0.211 Sum_probs=13.1
Q ss_pred cEEEeCCCCCchhHH
Q 015093 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~ 93 (413)
.+++.|+.|+|||..
T Consensus 6 Kv~liG~~~vGKTsL 20 (167)
T d1xtqa1 6 KIAILGYRSVGKSSL 20 (167)
T ss_dssp EEEEEESTTSSHHHH
T ss_pred EEEEECCCCcCHHHH
Confidence 489999999999954
No 374
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=27.06 E-value=80 Score=20.78 Aligned_cols=87 Identities=14% Similarity=0.113 Sum_probs=52.2
Q ss_pred eeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEE
Q 015093 109 CQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVL 188 (413)
Q Consensus 109 ~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIi 188 (413)
+++||+=............+++. |..+.. ..+.......+... .+++||+
T Consensus 4 ~~ILIVDDd~~~~~~l~~~L~~~----g~~v~~---------------------a~~~~~a~~~l~~~-----~~dlii~ 53 (123)
T d1krwa_ 4 GIVWVVDDDSSIRWVLERALAGA----GLTCTT---------------------FENGNEVLAALASK-----TPDVLLS 53 (123)
T ss_dssp CEEEEESSSHHHHHHHHHHHHHT----TCEEEE---------------------ESSSHHHHHHHTTC-----CCSEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHC----CCEEEE---------------------eCCHHHHHHHHHhC-----CCCEEEe
Confidence 36777777777666655555553 333322 23334444455442 3689999
Q ss_pred ccchhhhccCcHHHHHHHHhhCCCCceEEEEeeeCChhHH
Q 015093 189 DEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEAL 228 (413)
Q Consensus 189 DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~ 228 (413)
| .+ +.+.+-...+..+.+.. +..+++++||.......
T Consensus 54 D-~~-mp~~~G~el~~~l~~~~-~~~piI~~t~~~~~~~~ 90 (123)
T d1krwa_ 54 D-IR-MPGMDGLALLKQIKQRH-PMLPVIIMTAHSDLDAA 90 (123)
T ss_dssp C-CS-SSSSTTHHHHHHHHHHS-SSCCEEESCCCSCHHHH
T ss_pred h-hh-cCCchHHHHHHHHHHhC-CCCeEEEEecCCCHHHH
Confidence 9 33 55555555566665554 46789999998865443
No 375
>d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.97 E-value=47 Score=21.87 Aligned_cols=29 Identities=10% Similarity=0.143 Sum_probs=15.6
Q ss_pred EEEEEcCcccHHHHHHHHhhCCCeeEeec
Q 015093 282 SVIFVNTRRKVDWLTDQMRSRDHTVSATH 310 (413)
Q Consensus 282 ~lIf~~~~~~a~~l~~~l~~~~~~~~~~~ 310 (413)
+||.=......+.++..|+..|+.+....
T Consensus 3 ILiVDDd~~~~~~l~~~L~~~g~~v~~a~ 31 (119)
T d1zh2a1 3 VLIVEDEQAIRRFLRTALEGDGMRVFEAE 31 (119)
T ss_dssp EEEECSCHHHHHHHHHHHHTTTCEEEEES
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEeC
Confidence 44555555555556666665555554443
No 376
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.87 E-value=16 Score=26.76 Aligned_cols=15 Identities=20% Similarity=0.355 Sum_probs=12.9
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|+.|+|||...
T Consensus 6 vvllG~~~vGKTSli 20 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLL 20 (191)
T ss_dssp EEEEESTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 789999999999543
No 377
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.82 E-value=15 Score=26.43 Aligned_cols=14 Identities=14% Similarity=0.295 Sum_probs=12.4
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|.+|.|||..
T Consensus 8 I~iiG~~nvGKSSL 21 (179)
T d1egaa1 8 IAIVGRPNVGKSTL 21 (179)
T ss_dssp EEEECSSSSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 67899999999954
No 378
>g1pyo.1 c.17.1.1 (A:,B:) Caspase-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.13 E-value=53 Score=25.29 Aligned_cols=48 Identities=10% Similarity=0.081 Sum_probs=37.9
Q ss_pred CCcEEEEEcCc--------------ccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHHhc
Q 015093 279 ITQSVIFVNTR--------------RKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREFRS 327 (413)
Q Consensus 279 ~~~~lIf~~~~--------------~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~ 327 (413)
.|-+||+.+.. ..++.+++.|++.|+.+..+. +++..+-.+.++.|..
T Consensus 26 rG~aLII~N~~f~~~~~l~~r~g~~~Da~~l~~~l~~lGF~V~~~~-nlt~~em~~~l~~f~~ 87 (257)
T g1pyo.1 26 RGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVHVLC-DQTAQEMQEKLQNFAQ 87 (257)
T ss_dssp SEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEEEEEEE-SCCHHHHHHHHHHHHT
T ss_pred CCEEEEEeCccCCCccCCCCCCCcHHHHHHHHHHHHHCCCEEEEEe-cCCHHHHHHHHHHHHh
Confidence 34588887742 489999999999999876555 8888888888888853
No 379
>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.08 E-value=71 Score=21.47 Aligned_cols=30 Identities=13% Similarity=0.112 Sum_probs=15.6
Q ss_pred cEEEEEcCcccHHHHHHHHhhCCCeeEeec
Q 015093 281 QSVIFVNTRRKVDWLTDQMRSRDHTVSATH 310 (413)
Q Consensus 281 ~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~ 310 (413)
++||.=......+.+.+.|+..|+.+....
T Consensus 10 ~ILiVDD~~~~~~~l~~~L~~~g~~v~~a~ 39 (133)
T d2ayxa1 10 MILVVDDHPINRRLLADQLGSLGYQCKTAN 39 (133)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHTSEEEEEC
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCEEEEEC
Confidence 455555555555555555555555544333
No 380
>d1tf5a4 c.37.1.19 (A:396-570) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=25.98 E-value=1.1e+02 Score=21.96 Aligned_cols=72 Identities=17% Similarity=0.195 Sum_probs=42.7
Q ss_pred CCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhc---CCcEE
Q 015093 86 SGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSA---GVHVV 162 (413)
Q Consensus 86 tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Ii 162 (413)
|-..|..+.+-.+.+... .+..+||.+.+.+-.+.....+++. ++...++..... ......... ...|+
T Consensus 15 T~~eK~~AIi~eV~~~~~---~grPVLIgT~SIe~SE~ls~~L~~~----gi~h~vLnAk~~-~~Ea~II~~Ag~~g~Vt 86 (175)
T d1tf5a4 15 TMEGKFKAVAEDVAQRYM---TGQPVLVGTVAVETSELISKLLKNK----GIPHQVLNAKNH-EREAQIIEEAGQKGAVT 86 (175)
T ss_dssp SHHHHHHHHHHHHHHHHH---HTCCEEEEESCHHHHHHHHHHHHTT----TCCCEEECSSCH-HHHHHHHTTTTSTTCEE
T ss_pred CHHHHHHHHHHHHHHHHh---cCCCEEEEeCcHHHHHHHHHHHHHc----CCCceeehhhhH-HHHHHHHHhccCCCcee
Confidence 444565554433333222 2458999999999887766666554 666666665543 233333322 34699
Q ss_pred EeC
Q 015093 163 VGT 165 (413)
Q Consensus 163 i~T 165 (413)
|+|
T Consensus 87 IAT 89 (175)
T d1tf5a4 87 IAT 89 (175)
T ss_dssp EEE
T ss_pred ehh
Confidence 998
No 381
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.67 E-value=14 Score=27.08 Aligned_cols=14 Identities=21% Similarity=0.333 Sum_probs=12.6
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|..|+|||..
T Consensus 12 i~lvG~~~vGKTsL 25 (185)
T d2atxa1 12 CVVVGDGAVGKTCL 25 (185)
T ss_dssp EEEEECTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 89999999999954
No 382
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=25.53 E-value=25 Score=28.68 Aligned_cols=15 Identities=27% Similarity=0.386 Sum_probs=13.3
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+.|.|+-|+|||...
T Consensus 8 I~IEG~iGsGKSTl~ 22 (331)
T d1osna_ 8 IYLDGAYGIGKTTAA 22 (331)
T ss_dssp EEEEESSSSCTTHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 788999999999765
No 383
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.99 E-value=14 Score=27.04 Aligned_cols=15 Identities=13% Similarity=0.306 Sum_probs=13.0
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+++.|..|+|||...
T Consensus 5 iv~lG~~~vGKTsll 19 (200)
T d2bcjq2 5 LLLLGTGESGKSTFI 19 (200)
T ss_dssp EEEEESTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 789999999999653
No 384
>d2r25b1 c.23.1.1 (B:1087-1214) Response regulator Sin1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.88 E-value=91 Score=20.70 Aligned_cols=47 Identities=13% Similarity=-0.038 Sum_probs=30.2
Q ss_pred CccEEEEccchhhhccCcHHHHHHHHhhCCCCceEEEEeeeCChhHHHH
Q 015093 182 YIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEI 230 (413)
Q Consensus 182 ~~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~lSAT~~~~~~~~ 230 (413)
.+++|++|=. +...+-...+..+.+......+++++||.........
T Consensus 51 ~~dlillD~~--mP~~dG~el~~~ir~~~~~~~piI~lT~~~~~~~~~~ 97 (128)
T d2r25b1 51 NYNMIFMDVQ--MPKVDGLLSTKMIRRDLGYTSPIVALTAFADDSNIKE 97 (128)
T ss_dssp CCSEEEECSC--CSSSCHHHHHHHHHHHSCCCSCEEEEESCCSHHHHHH
T ss_pred CCCEEEEEeC--CCCCCHHHHHHHHHHccCCCCeEEEEECCCCHHHHHH
Confidence 4789999943 3334444555566555556678999999876554443
No 385
>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=24.80 E-value=48 Score=23.77 Aligned_cols=48 Identities=17% Similarity=0.237 Sum_probs=34.1
Q ss_pred hCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHh
Q 015093 75 CKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRAL 131 (413)
Q Consensus 75 ~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~ 131 (413)
.++++++|.|.=|++|+.++. + .. .+ ++.|+.-+.+.+++..+.+...
T Consensus 16 ~~~k~vlIlGaGG~arai~~a---L---~~--~~-~i~I~nR~~~ka~~l~~~~~~~ 63 (177)
T d1nvta1 16 VKDKNIVIYGAGGAARAVAFE---L---AK--DN-NIIIANRTVEKAEALAKEIAEK 63 (177)
T ss_dssp CCSCEEEEECCSHHHHHHHHH---H---TS--SS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCcHHHHHHHHH---H---cc--cc-ceeeehhhhhHHHHHHHHHHHh
Confidence 467889999988888876542 2 11 12 6777777778888888777654
No 386
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=24.69 E-value=97 Score=20.93 Aligned_cols=42 Identities=7% Similarity=-0.024 Sum_probs=28.3
Q ss_pred CccEEEEccchhhhccCcHHHHHHHHhhCCCCceEEEEeeeCChh
Q 015093 182 YIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPE 226 (413)
Q Consensus 182 ~~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~lSAT~~~~ 226 (413)
.+++|++| .+ +.+.+-...+..+.... ++.++|++||.....
T Consensus 44 ~~dlil~D-~~-mP~~~G~el~~~lr~~~-~~~pvI~lT~~~~~~ 85 (140)
T d1qkka_ 44 FAGIVISD-IR-MPGMDGLALFRKILALD-PDLPMILVTGHGDIP 85 (140)
T ss_dssp CCSEEEEE-SC-CSSSCHHHHHHHHHHHC-TTSCEEEEECGGGHH
T ss_pred CcchHHHh-hc-cCCCCHHHHHHHHHHhC-CCCcEEEEECCCCHH
Confidence 36899998 33 55555455555655554 468899999987543
No 387
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=24.47 E-value=90 Score=20.47 Aligned_cols=84 Identities=17% Similarity=0.152 Sum_probs=49.2
Q ss_pred eeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHHhcCCcEEEeChHHHHHHHHcCCCCCCCccEEEE
Q 015093 109 CQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVL 188 (413)
Q Consensus 109 ~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iii~T~~~l~~~~~~~~~~~~~~~~iIi 188 (413)
+++|++=.....+....+.+++. |..+. ...+.......+.... ++++++
T Consensus 2 PkILiVDD~~~~~~~l~~~L~~~----g~~v~---------------------~a~~~~eal~~~~~~~-----~dlvl~ 51 (121)
T d1ys7a2 2 PRVLVVDDDSDVLASLERGLRLS----GFEVA---------------------TAVDGAEALRSATENR-----PDAIVL 51 (121)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT----TCEEE---------------------EESSHHHHHHHHHHSC-----CSEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHC----CCEEE---------------------EECCHHHHHHHHHhCC-----CCEEEE
Confidence 46777777777666666655553 32222 2334445555555432 689999
Q ss_pred ccchhhhccCcHHHHHHHHhhCCCCceEEEEeeeCCh
Q 015093 189 DEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPP 225 (413)
Q Consensus 189 DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~lSAT~~~ 225 (413)
|-- +.+.+-...+..+. ......+++++||....
T Consensus 52 D~~--mP~~~G~el~~~ir-~~~~~~piI~lt~~~~~ 85 (121)
T d1ys7a2 52 DIN--MPVLDGVSVVTALR-AMDNDVPVCVLSARSSV 85 (121)
T ss_dssp ESS--CSSSCHHHHHHHHH-HTTCCCCEEEEECCCTT
T ss_pred Eee--ccCcccHHHHHHHH-hcCCCCEEEEEEeeCCH
Confidence 832 34444444455554 44457889999998643
No 388
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.60 E-value=18 Score=26.15 Aligned_cols=16 Identities=13% Similarity=0.190 Sum_probs=13.5
Q ss_pred cEEEeCCCCCchhHHH
Q 015093 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~lv~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 7 ki~vlG~~~vGKTsLi 22 (175)
T d2bmja1 7 RLGVLGDARSGKSSLI 22 (175)
T ss_dssp EEEEECCTTTTHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3799999999999654
No 389
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}
Probab=23.45 E-value=39 Score=26.42 Aligned_cols=51 Identities=8% Similarity=0.045 Sum_probs=33.8
Q ss_pred ceEEEEEeCccccHHHHHHHHHHhcCCCcEEEEEcCcccHHHHHHHHhhCCCe
Q 015093 253 IKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMRSRDHT 305 (413)
Q Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lIf~~~~~~a~~l~~~l~~~~~~ 305 (413)
....+...+.....++.+...++ ++++.++|+++.++.+.+.+.|++.++.
T Consensus 173 ~D~V~~d~p~p~~~l~~~~~~LK--pGG~lv~~~P~~~Qv~~~~~~l~~~gF~ 223 (266)
T d1o54a_ 173 VDALFLDVPDPWNYIDKCWEALK--GGGRFATVCPTTNQVQETLKKLQELPFI 223 (266)
T ss_dssp EEEEEECCSCGGGTHHHHHHHEE--EEEEEEEEESSHHHHHHHHHHHHHSSEE
T ss_pred eeeeEecCCCHHHHHHHHHhhcC--CCCEEEEEeCcccHHHHHHHHHHHCCce
Confidence 33344444443344444444443 5578899999999999999999887754
No 390
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=23.06 E-value=24 Score=27.58 Aligned_cols=38 Identities=26% Similarity=0.364 Sum_probs=28.2
Q ss_pred ccEEEEccchhhhccCcHHHHHHHHhhCCCC-ceEEEEe
Q 015093 183 IRMFVLDEADEMLSRGFKDQIYDIFQHLPGK-IQVGVFS 220 (413)
Q Consensus 183 ~~~iIiDE~h~~~~~~~~~~~~~~~~~~~~~-~~~i~lS 220 (413)
.+++++||...-++......+..+++.+.+. .+++..|
T Consensus 226 ~~llllDEp~~~Ld~~~~~~l~~~l~~~~~~~~qviv~T 264 (292)
T g1f2t.1 226 ISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVS 264 (292)
T ss_dssp CSEEEEESCSCTTCHHHHHHHHHHHHHTGGGSSEEEEEE
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 4699999998877777777777888777543 5766553
No 391
>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=22.40 E-value=1.1e+02 Score=20.74 Aligned_cols=64 Identities=11% Similarity=0.012 Sum_probs=47.9
Q ss_pred CcEEEEEcCcccHHHHHHHHhhCCCeeEeecCCCCHHHHHHHHHHH-hcCCCeEEEEeCccccCCC
Q 015093 280 TQSVIFVNTRRKVDWLTDQMRSRDHTVSATHGDMDQNSRDIIMREF-RSGSSRVLITTDLLARGID 344 (413)
Q Consensus 280 ~~~lIf~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f-~~~~~~vli~t~~~~~G~d 344 (413)
-.++|=+...+......+.+.+.+.+...=+.++++++.+.+.+.. ...+..++++.++ +.|++
T Consensus 45 ~DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG~~~~~~~~l~~~~~~~~~ipil~apNf-SlGvn 109 (135)
T d1yl7a1 45 TEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNF-TSFVP 109 (135)
T ss_dssp CSEEEECCCTTTHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHSCTTCEEEECSCC-GGGHH
T ss_pred CCEEEEcccHHHHHHHHHHHHhcCCCEEEeccccchhHHHHHHHHHHhcCCCCEEEcCCc-cHHHH
Confidence 4688888888999999999999999888878888877666665543 4567788887764 34443
No 392
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=22.36 E-value=19 Score=26.16 Aligned_cols=14 Identities=14% Similarity=0.337 Sum_probs=12.5
Q ss_pred EEEeCCCCCchhHH
Q 015093 80 VIQQAQSGTGKTAT 93 (413)
Q Consensus 80 ~lv~~~tGsGKT~~ 93 (413)
+++.|..|+|||..
T Consensus 5 ivllG~~~vGKTsl 18 (195)
T d1svsa1 5 LLLLGAGESGKSTI 18 (195)
T ss_dssp EEEECSTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 78999999999954
No 393
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}
Probab=22.09 E-value=36 Score=24.45 Aligned_cols=49 Identities=12% Similarity=0.130 Sum_probs=33.6
Q ss_pred hCCCcEEEeCCCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHh
Q 015093 75 CKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRAL 131 (413)
Q Consensus 75 ~~~~~~lv~~~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~ 131 (413)
.++++++|.|.=|+||+.++. +. .. ..++.|+.-+.+-++++.+.+...
T Consensus 16 ~~~k~vlIlGaGGaarai~~a--L~----~~--~~~i~I~nR~~~~a~~l~~~~~~~ 64 (171)
T d1p77a1 16 RPNQHVLILGAGGATKGVLLP--LL----QA--QQNIVLANRTFSKTKELAERFQPY 64 (171)
T ss_dssp CTTCEEEEECCSHHHHTTHHH--HH----HT--TCEEEEEESSHHHHHHHHHHHGGG
T ss_pred CCCCEEEEECCcHHHHHHHHH--Hc----cc--CceeeeccchHHHHHHHHHHHhhc
Confidence 357889999999998886652 11 11 237777777777777777766543
No 394
>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.00 E-value=28 Score=24.60 Aligned_cols=37 Identities=8% Similarity=0.054 Sum_probs=30.5
Q ss_pred cCCCcEEEEEcCcccHHHHHHHHhhCCC-eeEeecCCC
Q 015093 277 LAITQSVIFVNTRRKVDWLTDQMRSRDH-TVSATHGDM 313 (413)
Q Consensus 277 ~~~~~~lIf~~~~~~a~~l~~~l~~~~~-~~~~~~~~~ 313 (413)
....+++++|.+-..+...+..|.+.|+ ++..+.|++
T Consensus 56 ~~~~~vv~~c~~g~rs~~~a~~l~~~G~~~v~~L~GG~ 93 (157)
T d1yt8a3 56 GTAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGT 93 (157)
T ss_dssp CCCSEEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHH
T ss_pred ccCcceeeccCCcchHHHHHHHHhcccCceEEEecCCH
Confidence 3557899999998888888998988776 678888884
No 395
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=21.12 E-value=1.9e+02 Score=23.11 Aligned_cols=97 Identities=12% Similarity=0.053 Sum_probs=57.2
Q ss_pred CCCCchhHHHHHHHHHhcccccCceeEEEEcccHHHHHHHHHHHHHhhcccCceEEEEECCcchHHHHHHH---hc---C
Q 015093 85 QSGTGKTATFCSGILQQLDYESLQCQALVLAPTRELAQQIEKVMRALGDYMGVKVHACVGGTSVREDQRIL---SA---G 158 (413)
Q Consensus 85 ~tGsGKT~~~~~~i~~~l~~~~~~~~~lvl~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~ 158 (413)
+-.|||... +..++..+... .+.++||.+.......-..+.+ ...++.+..+.|+.........+ .. .
T Consensus 97 ~~~S~Kl~~-L~~ll~~~~~~-~g~KvlIFs~~~~~ld~l~~~l----~~~g~~~~~l~G~~~~~~R~~~i~~F~~~~~~ 170 (346)
T d1z3ix1 97 PQLSGKMLV-LDYILAMTRTT-TSDKVVLVSNYTQTLDLFEKLC----RNRRYLYVRLDGTMSIKKRAKIVERFNNPSSP 170 (346)
T ss_dssp GGGSHHHHH-HHHHHHHHHHH-CCCEEEEEESCHHHHHHHHHHH----HHHTCCEEEECSSCCHHHHHHHHHHHHSTTCC
T ss_pred cccCHHHHH-HHHHHHHHHHh-cCCceeEEeehhhhhHHHHHHH----hhhhccccccccchhHHHHHHHHHhhhccccc
Confidence 445899753 44455444322 2458999998887655444443 34478888999988765544333 22 2
Q ss_pred CcEEEeChHHHHHHHHcCCCCCCCccEEEEccch
Q 015093 159 VHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEAD 192 (413)
Q Consensus 159 ~~Iii~T~~~l~~~~~~~~~~~~~~~~iIiDE~h 192 (413)
..|++.+... ...++.+...+.||+=+.+
T Consensus 171 ~~vlLls~~a-----gg~GlnL~~a~~vi~~d~~ 199 (346)
T d1z3ix1 171 EFIFMLSSKA-----GGCGLNLIGANRLVMFDPD 199 (346)
T ss_dssp CCEEEEEGGG-----SCTTCCCTTEEEEEECSCC
T ss_pred ceeeeecchh-----hhhccccccceEEEEecCC
Confidence 2366666432 2345566666777776666
No 396
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=20.91 E-value=10 Score=26.89 Aligned_cols=15 Identities=13% Similarity=0.372 Sum_probs=12.9
Q ss_pred EEEeCCCCCchhHHH
Q 015093 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~lv~~~tGsGKT~~~ 94 (413)
+.+.|.+|+|||...
T Consensus 3 I~liG~~n~GKSSLi 17 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLL 17 (160)
T ss_dssp EEEECCHHHHTCHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 688999999999654
No 397
>d1xxaa_ d.74.2.1 (A:) C-terminal domain of arginine repressor {Escherichia coli [TaxId: 562]}
Probab=20.35 E-value=46 Score=19.86 Aligned_cols=22 Identities=9% Similarity=-0.127 Sum_probs=19.1
Q ss_pred cEEEEEcCcccHHHHHHHHhhC
Q 015093 281 QSVIFVNTRRKVDWLTDQMRSR 302 (413)
Q Consensus 281 ~~lIf~~~~~~a~~l~~~l~~~ 302 (413)
-++|.|.+.+.++.+++.+++.
T Consensus 49 Tvlvi~~~~~~a~~l~~~i~~L 70 (71)
T d1xxaa_ 49 TIFTTPANGFTVKDLYEAILEL 70 (71)
T ss_dssp EEEEEECTTCCHHHHHHHHHTT
T ss_pred EEEEEECCHHHHHHHHHHHHHh
Confidence 5789999999999999998753
No 398
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]}
Probab=20.35 E-value=1.6e+02 Score=24.05 Aligned_cols=73 Identities=5% Similarity=0.053 Sum_probs=50.5
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEcCc--c---cHHHHHHHHhhCCCeeEeecCCC---CHHHHHHHHHHHhcCCCeEEEEe
Q 015093 265 WKLDTLCDLYETLAITQSVIFVNTR--R---KVDWLTDQMRSRDHTVSATHGDM---DQNSRDIIMREFRSGSSRVLITT 336 (413)
Q Consensus 265 ~~~~~l~~~~~~~~~~~~lIf~~~~--~---~a~~l~~~l~~~~~~~~~~~~~~---~~~~r~~~~~~f~~~~~~vli~t 336 (413)
..+..+.+.++....++++|++... + ..+.+.+.|++.++.+..+.+-. +...-.+..+.++..+.+++|+.
T Consensus 20 g~~~~l~~~l~~~g~~rvliVt~~~~~~~~g~~~~l~~~L~~~gi~~~~f~~v~~~pt~~~v~~~~~~~~~~~~D~IIav 99 (398)
T d1vlja_ 20 GTIPKIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGV 99 (398)
T ss_dssp TCGGGHHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHhcCCCeEEEEECCcHHHHhhHHHHHHHHHHhcCCeEEEEcCccCCCCHHHHHHHhhhcccccCceEEec
Confidence 3555677777777667787777532 2 35788889999898888775532 34555667777777788888875
Q ss_pred C
Q 015093 337 D 337 (413)
Q Consensus 337 ~ 337 (413)
-
T Consensus 100 G 100 (398)
T d1vlja_ 100 G 100 (398)
T ss_dssp E
T ss_pred C
Confidence 3
Done!