BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015094
(413 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/302 (44%), Positives = 185/302 (61%), Gaps = 14/302 (4%)
Query: 64 NLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL 123
L+ F+ EL+ A+ NF + +LG GGFGKV+KG L GT++AVK+L E
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL--------ADGTLVAVKRLKEERX 75
Query: 124 QGFE-EWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP 182
QG E ++Q+EV + H NL+RL G+C E LLVY +M GS+ + L R S P
Sbjct: 76 QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP 135
Query: 183 LAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSA 241
L W R +IA+G+ARGLA+LH D ++I+RD KA+NILLD + A + DFGLAKL
Sbjct: 136 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDY 194
Query: 242 SQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHN- 300
HV V GT G+ APEY++TG K+DV+G+GV+L+E++TG RA D R + +
Sbjct: 195 KDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 254
Query: 301 -LVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVET 359
L+DW+K L EK K ++D LQG Y + Q+ Q++L C ++ P RP M EVV
Sbjct: 255 MLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 313
Query: 360 LE 361
LE
Sbjct: 314 LE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/302 (43%), Positives = 183/302 (60%), Gaps = 14/302 (4%)
Query: 64 NLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL 123
L+ F+ EL+ A+ NF + +LG GGFGKV+KG L G ++AVK+L E
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRL--------ADGXLVAVKRLKEERT 67
Query: 124 QGFE-EWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP 182
QG E ++Q+EV + H NL+RL G+C E LLVY +M GS+ + L R S P
Sbjct: 68 QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP 127
Query: 183 LAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSA 241
L W R +IA+G+ARGLA+LH D ++I+RD KA+NILLD + A + DFGLAKL
Sbjct: 128 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDY 186
Query: 242 SQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHN- 300
HV V G G+ APEY++TG K+DV+G+GV+L+E++TG RA D R + +
Sbjct: 187 KDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246
Query: 301 -LVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVET 359
L+DW+K L EK K ++D LQG Y + Q+ Q++L C ++ P RP M EVV
Sbjct: 247 MLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305
Query: 360 LE 361
LE
Sbjct: 306 LE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 186/324 (57%), Gaps = 15/324 (4%)
Query: 46 SASSGDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPG 105
+ +S +++ + ++P + R+ V+L AT NF ++G G FGKV+KG L +
Sbjct: 8 ATNSINDALSSSYLVPFESYRV-PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD---- 62
Query: 106 KSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQ 165
G +A+K+ ES QG EE+++E+ L HP+LV L+G+C E E++L+Y++M+
Sbjct: 63 ----GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME 118
Query: 166 KGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSY 225
G+L+ HL+G ++W RL+I IGAARGL +LHT + +I+RD K+ NILLD ++
Sbjct: 119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT--RAIIHRDVKSINILLDENF 176
Query: 226 TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
KI+DFG++K G Q+H+ V GT GY PEY G L KSDVY FGVVL E+L
Sbjct: 177 VPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLC 236
Query: 286 GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEA 345
A+ + P NL +W + I+D L + ++ + ++KCL
Sbjct: 237 ARSAIVQSLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLAL 295
Query: 346 EPKHRPSMREVVETLE---RLQAS 366
+ RPSM +V+ LE RLQ S
Sbjct: 296 SSEDRPSMGDVLWKLEYALRLQES 319
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 186/324 (57%), Gaps = 15/324 (4%)
Query: 46 SASSGDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPG 105
+ +S +++ + ++P + R+ V+L AT NF ++G G FGKV+KG L +
Sbjct: 8 ATNSINDALSSSYLVPFESYRV-PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD---- 62
Query: 106 KSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQ 165
G +A+K+ ES QG EE+++E+ L HP+LV L+G+C E E++L+Y++M+
Sbjct: 63 ----GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME 118
Query: 166 KGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSY 225
G+L+ HL+G ++W RL+I IGAARGL +LHT + +I+RD K+ NILLD ++
Sbjct: 119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT--RAIIHRDVKSINILLDENF 176
Query: 226 TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
KI+DFG++K G Q+H+ V GT GY PEY G L KSDVY FGVVL E+L
Sbjct: 177 VPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLC 236
Query: 286 GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEA 345
A+ + P NL +W + I+D L + ++ + ++KCL
Sbjct: 237 ARSAIVQSLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLAL 295
Query: 346 EPKHRPSMREVVETLE---RLQAS 366
+ RPSM +V+ LE RLQ S
Sbjct: 296 SSEDRPSMGDVLWKLEYALRLQES 319
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 179/313 (57%), Gaps = 34/313 (10%)
Query: 68 FTFVELRAATRNFKSDTV------LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL--- 118
F+F EL+ T NF + +GEGGFG V+KG+++ T +AVKKL
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN---------NTTVAVKKLAAM 65
Query: 119 ---NSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFG 175
+E L+ +++ E+ + + H NLV LLG+ + +L LVY +M GSL + L
Sbjct: 66 VDITTEELK--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 176 RGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLA 235
+ PL+W++R KIA GAA G+ FLH + I+RD K++NILLD ++TAKISDFGLA
Sbjct: 124 LDGT-PPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 236 KLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
+ +Q+ + +R++GT Y APE + G + KSD+Y FGVVL+EI+TGL A+D +R
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 296 SGQHNLVDWIKPYLSEKRKFRHIIDARLQ--GQYPYKAAYQIAQLSLKCLEAEPKHRPSM 353
L+D + E++ ID ++ +A Y +A +CL + RP +
Sbjct: 240 P--QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVAS---QCLHEKKNKRPDI 294
Query: 354 REVVETLERLQAS 366
++V + L+ + AS
Sbjct: 295 KKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 178/313 (56%), Gaps = 34/313 (10%)
Query: 68 FTFVELRAATRNFKSDTV------LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL--- 118
F+F EL+ T NF + +GEGGFG V+KG+++ T +AVKKL
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN---------NTTVAVKKLAAM 65
Query: 119 ---NSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFG 175
+E L+ +++ E+ + + H NLV LLG+ + +L LVY +M GSL + L
Sbjct: 66 VDITTEELK--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 176 RGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLA 235
+ PL+W++R KIA GAA G+ FLH + I+RD K++NILLD ++TAKISDFGLA
Sbjct: 124 LDGT-PPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 236 KLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
+ +Q+ + R++GT Y APE + G + KSD+Y FGVVL+EI+TGL A+D +R
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 296 SGQHNLVDWIKPYLSEKRKFRHIIDARLQ--GQYPYKAAYQIAQLSLKCLEAEPKHRPSM 353
L+D + E++ ID ++ +A Y +A +CL + RP +
Sbjct: 240 P--QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVAS---QCLHEKKNKRPDI 294
Query: 354 REVVETLERLQAS 366
++V + L+ + AS
Sbjct: 295 KKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 177/313 (56%), Gaps = 34/313 (10%)
Query: 68 FTFVELRAATRNFKSDTV------LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL--- 118
F+F EL+ T NF + +GEGGFG V+KG+++ T +AVKKL
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN---------NTTVAVKKLAAM 59
Query: 119 ---NSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFG 175
+E L+ +++ E+ + + H NLV LLG+ + +L LVY +M GSL + L
Sbjct: 60 VDITTEELK--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 117
Query: 176 RGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLA 235
+ PL+W++R KIA GAA G+ FLH + I+RD K++NILLD ++TAKISDFGLA
Sbjct: 118 LDGT-PPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLA 174
Query: 236 KLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
+ +Q + R++GT Y APE + G + KSD+Y FGVVL+EI+TGL A+D +R
Sbjct: 175 RASEKFAQXVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 233
Query: 296 SGQHNLVDWIKPYLSEKRKFRHIIDARLQ--GQYPYKAAYQIAQLSLKCLEAEPKHRPSM 353
L+D + E++ ID ++ +A Y +A +CL + RP +
Sbjct: 234 P--QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVAS---QCLHEKKNKRPDI 288
Query: 354 REVVETLERLQAS 366
++V + L+ + AS
Sbjct: 289 KKVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 171/313 (54%), Gaps = 34/313 (10%)
Query: 68 FTFVELRAATRNFKSDTV------LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL--- 118
F+F EL+ T NF + GEGGFG V+KG+++ T +AVKKL
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN---------NTTVAVKKLAAM 56
Query: 119 ---NSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFG 175
+E L+ +++ E+ + H NLV LLG+ + +L LVY + GSL + L
Sbjct: 57 VDITTEELK--QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSC 114
Query: 176 RGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLA 235
+ PL+W+ R KIA GAA G+ FLH + I+RD K++NILLD ++TAKISDFGLA
Sbjct: 115 LDGT-PPLSWHXRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLA 171
Query: 236 KLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
+ +Q +R++GT Y APE + G + KSD+Y FGVVL+EI+TGL A+D +R
Sbjct: 172 RASEKFAQXVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 230
Query: 296 SGQHNLVDWIKPYLSEKRKFRHIIDARLQ--GQYPYKAAYQIAQLSLKCLEAEPKHRPSM 353
L+D + E++ ID + +A Y +A +CL + RP +
Sbjct: 231 P--QLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVAS---QCLHEKKNKRPDI 285
Query: 354 REVVETLERLQAS 366
++V + L+ AS
Sbjct: 286 KKVQQLLQEXTAS 298
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 130/287 (45%), Gaps = 30/287 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG--FEEWQSEVNFLGRLSHPN 143
+G G FG V + G+ +AVK L + E+ EV + RL HPN
Sbjct: 45 IGAGSFGTVHRA---------EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V +G + L +V E++ +GSL L GA Q L RL +A A+G+ +LH
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLH 154
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ +++RD K+ N+L+D YT K+ DFGL++L AS + GT + APE +
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLR 212
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARL 323
KSDVY FGV+L E+ T +P G N + + ++
Sbjct: 213 DEPSNEKSDVYSFGVILWELAT------LQQPWGNLNPAQVVAAVGFKCKRL-------- 258
Query: 324 QGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ P Q+A + C EP RPS +++ L L S P
Sbjct: 259 --EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 130/287 (45%), Gaps = 30/287 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG--FEEWQSEVNFLGRLSHPN 143
+G G FG V + G+ +AVK L + E+ EV + RL HPN
Sbjct: 45 IGAGSFGTVHRA---------EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V +G + L +V E++ +GSL L GA Q L RL +A A+G+ +LH
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLH 154
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ +++R+ K+ N+L+D YT K+ DFGL++L S S + GT + APE +
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS--SKSAAGTPEWMAPEVLR 212
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARL 323
KSDVY FGV+L E+ T +P G N + + ++
Sbjct: 213 DEPSNEKSDVYSFGVILWELAT------LQQPWGNLNPAQVVAAVGFKCKRL-------- 258
Query: 324 QGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ P Q+A + C EP RPS +++ L L S P
Sbjct: 259 --EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 141/303 (46%), Gaps = 47/303 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL-------NSESLQGFEE 128
A + + +G+GGFG V KG L + +V+A+K L +E ++ F+E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDK-------SVVAIKSLILGDSEGETEMIEKFQE 69
Query: 129 WQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR 188
+Q EV + L+HPN+V+L G +V EF+ G L + L + P+ W+++
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA---HPIKWSVK 124
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILL-----DGSYTAKISDFGLAKLGPSASQ 243
L++ + A G+ ++ + +++RD ++ NI L + AK++DFGL S
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL-----SQQS 179
Query: 244 SHVTTRVMGTYGYAAPEYV-ATGHLYV-KSDVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
H + ++G + + APE + A Y K+D Y F ++L ILTG D
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE--------- 230
Query: 302 VDWIKPYLSEKRKFRHII-DARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL 360
Y K KF ++I + L+ P ++ + C +PK RP +V+ L
Sbjct: 231 ------YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
Query: 361 ERL 363
L
Sbjct: 285 SEL 287
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 26/315 (8%)
Query: 50 GDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGS 109
G +Y + P + F + AT N D V+G G FG+V G L K P K
Sbjct: 18 GLRTYVDPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--KLPSKKEI 74
Query: 110 GTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL 169
I K+ Q ++ E + +G+ HPN++RL G + K +++V E+M+ GSL
Sbjct: 75 SVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKI 229
++ L A + L+ G A G+ +L SD ++RD A NIL++ + K+
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLR---GIASGMKYL--SDMGYVHRDLAARNILINSNLVCKV 188
Query: 230 SDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLR 288
SDFGL+++ ++ TTR + +PE +A SDV+ +G+VL E+++
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-- 246
Query: 289 ALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
RP + + D IK +D + P + QL L C + +
Sbjct: 247 ---GERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLMLDCWQKDRN 292
Query: 349 HRPSMREVVETLERL 363
+RP ++V L++L
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 26/315 (8%)
Query: 50 GDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGS 109
G ++ + P + F + AT N D V+G G FG+V G L K P K
Sbjct: 18 GLRTFVDPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--KLPSKKEI 74
Query: 110 GTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL 169
I K+ Q ++ E + +G+ HPN++RL G + K +++V E+M+ GSL
Sbjct: 75 SVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKI 229
++ L A + L+ G A G+ +L SD ++RD A NIL++ + K+
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLR---GIASGMKYL--SDMGYVHRDLAARNILINSNLVCKV 188
Query: 230 SDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLR 288
SDFGLA++ ++ TTR + +PE +A SDV+ +G+VL E+++
Sbjct: 189 SDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-- 246
Query: 289 ALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
RP + + D IK +D + P + QL L C + +
Sbjct: 247 ---GERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLMLDCWQKDRN 292
Query: 349 HRPSMREVVETLERL 363
+RP ++V L++L
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 26/315 (8%)
Query: 50 GDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGS 109
G +Y + P + F + AT N D V+G G FG+V G L K P K
Sbjct: 16 GLRTYVDPHTYEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--KLPSKKEI 72
Query: 110 GTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL 169
I K+ Q ++ E + +G+ HPN++RL G + K +++V E+M+ GSL
Sbjct: 73 SVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 131
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKI 229
++ L A + L+ G A G+ +L SD ++RD A NIL++ + K+
Sbjct: 132 DSFLRKHDAQFTVIQLVGMLR---GIASGMKYL--SDMGYVHRDLAARNILINSNLVCKV 186
Query: 230 SDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLR 288
SDFGL+++ ++ TTR + +PE +A SDV+ +G+VL E+++
Sbjct: 187 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-- 244
Query: 289 ALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
RP + + D IK +D + P + QL L C + +
Sbjct: 245 ---GERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLMLDCWQKDRN 290
Query: 349 HRPSMREVVETLERL 363
+RP ++V L++L
Sbjct: 291 NRPKFEQIVSILDKL 305
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 26/315 (8%)
Query: 50 GDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGS 109
G +Y + P + F + AT N D V+G G FG+V G L K P K
Sbjct: 18 GLRTYVDPHTYEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--KLPSKKEI 74
Query: 110 GTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL 169
I K+ Q ++ E + +G+ HPN++RL G + K +++V E+M+ GSL
Sbjct: 75 SVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKI 229
++ L A + L+ G A G+ +L SD ++RD A NIL++ + K+
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLR---GIASGMKYL--SDMGYVHRDLAARNILINSNLVCKV 188
Query: 230 SDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLR 288
SDFGL+++ ++ TTR + +PE +A SDV+ +G+VL E+++
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-- 246
Query: 289 ALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
RP + + D IK +D + P + QL L C + +
Sbjct: 247 ---GERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLMLDCWQKDRN 292
Query: 349 HRPSMREVVETLERL 363
+RP ++V L++L
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 145/315 (46%), Gaps = 26/315 (8%)
Query: 50 GDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGS 109
G ++ + P + F + AT N D V+G G FG+V G L K P K
Sbjct: 18 GLRTFVDPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--KLPSKKEI 74
Query: 110 GTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL 169
I K+ Q ++ E + +G+ HPN++RL G + K +++V E+M+ GSL
Sbjct: 75 SVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKI 229
++ L A + L+ G A G+ +L SD ++RD A NIL++ + K+
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLR---GIASGMKYL--SDMGFVHRDLAARNILINSNLVCKV 188
Query: 230 SDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLR 288
SDFGL+++ ++ TTR + +PE +A SDV+ +G+VL E+++
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-- 246
Query: 289 ALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
RP + + D IK +D + P + QL L C + +
Sbjct: 247 ---GERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLMLDCWQKDRN 292
Query: 349 HRPSMREVVETLERL 363
+RP ++V L++L
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 151/327 (46%), Gaps = 58/327 (17%)
Query: 62 TPNLRIF----TFVELRAATRNF---------KSDTVLGEGGFGKVFKGWLDEKAPGKSG 108
TP ++IF TF + A R F K + V+G G FG+V G L K PGK
Sbjct: 4 TPGMKIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHL--KLPGKRE 61
Query: 109 SGTVIAVKKLNSESLQGFEEWQ-----SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEF 163
+A+K L S G+ E Q SE + +G+ HPN++ L G + ++++ EF
Sbjct: 62 --IFVAIKTLKS----GYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEF 115
Query: 164 MQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG 223
M+ GSL++ L + L+ G A G+ +L +D ++RD A NIL++
Sbjct: 116 MENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL--ADMNYVHRDLAARNILVNS 170
Query: 224 SYTAKISDFGLAKLGPSASQSHVTTRVMG---TYGYAAPEYVATGHLYVKSDVYGFGVVL 280
+ K+SDFGL++ + T +G + APE + SDV+ +G+V+
Sbjct: 171 NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM 230
Query: 281 VEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQY----PYKAAYQIA 336
E+++ G+ +PY + +I+A ++ Y P +
Sbjct: 231 WEVMS----------YGE-------RPYWDMTNQ--DVINA-IEQDYRLPPPMDCPSALH 270
Query: 337 QLSLKCLEAEPKHRPSMREVVETLERL 363
QL L C + + HRP ++V TL+++
Sbjct: 271 QLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 145/315 (46%), Gaps = 26/315 (8%)
Query: 50 GDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGS 109
G ++ + P + F + AT N D V+G G FG+V G L K P K
Sbjct: 18 GLRTFVDPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--KLPSKKEI 74
Query: 110 GTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL 169
I K+ Q ++ E + +G+ HPN++RL G + K +++V E+M+ GSL
Sbjct: 75 SVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKI 229
++ L A + L+ G A G+ +L SD ++RD A NIL++ + K+
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLR---GIASGMKYL--SDMGYVHRDLAARNILINSNLVCKV 188
Query: 230 SDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLR 288
SDFGL+++ ++ TTR + +PE +A SDV+ +G+VL E+++
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-- 246
Query: 289 ALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
RP + + D IK +D + P + QL L C + +
Sbjct: 247 ---GERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLMLDCWQKDRN 292
Query: 349 HRPSMREVVETLERL 363
+RP ++V L++L
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 26/302 (8%)
Query: 63 PNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES 122
P + F + AT N D V+G G FG+V G L K P K I K+
Sbjct: 31 PTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--KLPSKKEISVAIKTLKVGYTE 87
Query: 123 LQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP 182
Q ++ E + +G+ HPN++RL G + K +++V E+M+ GSL++ L A
Sbjct: 88 KQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 183 LAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS 242
+ L+ G A G+ +L SD ++RD A NIL++ + K+SDFGL+++
Sbjct: 147 IQLVGMLR---GIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 243 QSHVTTRVMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
++ TTR + +PE +A SDV+ +G+VL E+++ RP + +
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSN 256
Query: 302 VDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLE 361
D IK +D + P + QL L C + + +RP ++V L+
Sbjct: 257 QDVIKA-----------VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 362 RL 363
+L
Sbjct: 306 KL 307
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 144/315 (45%), Gaps = 26/315 (8%)
Query: 50 GDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGS 109
G ++ + P + F + AT N D V+G G FG+V G L K P K
Sbjct: 18 GLRTFVDPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--KLPSKKEI 74
Query: 110 GTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL 169
I K+ Q ++ E + +G+ HPN++RL G + K +++V E+M+ GSL
Sbjct: 75 SVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKI 229
++ L A + L+ G A G+ +L SD ++RD A NIL++ + K+
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLR---GIASGMKYL--SDMGYVHRDLAARNILINSNLVCKV 188
Query: 230 SDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLR 288
SDFGL ++ ++ TTR + +PE +A SDV+ +G+VL E+++
Sbjct: 189 SDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-- 246
Query: 289 ALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
RP + + D IK +D + P + QL L C + +
Sbjct: 247 ---GERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLMLDCWQKDRN 292
Query: 349 HRPSMREVVETLERL 363
+RP ++V L++L
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 140/303 (46%), Gaps = 47/303 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL-------NSESLQGFEE 128
A + + +G+GGFG V KG L + +V+A+K L +E ++ F+E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDK-------SVVAIKSLILGDSEGETEMIEKFQE 69
Query: 129 WQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR 188
+Q EV + L+HPN+V+L G +V EF+ G L + L + P+ W+++
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA---HPIKWSVK 124
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILL-----DGSYTAKISDFGLAKLGPSASQ 243
L++ + A G+ ++ + +++RD ++ NI L + AK++DFG S
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGT-----SQQS 179
Query: 244 SHVTTRVMGTYGYAAPEYV-ATGHLYV-KSDVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
H + ++G + + APE + A Y K+D Y F ++L ILTG D
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE--------- 230
Query: 302 VDWIKPYLSEKRKFRHII-DARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL 360
Y K KF ++I + L+ P ++ + C +PK RP +V+ L
Sbjct: 231 ------YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
Query: 361 ERL 363
L
Sbjct: 285 SEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 140/303 (46%), Gaps = 47/303 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL-------NSESLQGFEE 128
A + + +G+GGFG V KG L + +V+A+K L +E ++ F+E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDK-------SVVAIKSLILGDSEGETEMIEKFQE 69
Query: 129 WQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR 188
+Q EV + L+HPN+V+L G +V EF+ G L + L + P+ W+++
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA---HPIKWSVK 124
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILL-----DGSYTAKISDFGLAKLGPSASQ 243
L++ + A G+ ++ + +++RD ++ NI L + AK++DF L S
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL-----SQQS 179
Query: 244 SHVTTRVMGTYGYAAPEYV-ATGHLYV-KSDVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
H + ++G + + APE + A Y K+D Y F ++L ILTG D
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE--------- 230
Query: 302 VDWIKPYLSEKRKFRHII-DARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL 360
Y K KF ++I + L+ P ++ + C +PK RP +V+ L
Sbjct: 231 ------YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
Query: 361 ERL 363
L
Sbjct: 285 SEL 287
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 144/315 (45%), Gaps = 26/315 (8%)
Query: 50 GDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGS 109
G +Y + P + F + AT N D V+G G FG+V G L K P K
Sbjct: 18 GLRTYVDPHTYEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--KLPSKKEI 74
Query: 110 GTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL 169
I K+ Q ++ E + +G+ HPN++RL G + K +++V E M+ GSL
Sbjct: 75 SVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKI 229
++ L A + L+ G A G+ +L SD ++RD A NIL++ + K+
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLR---GIASGMKYL--SDMGYVHRDLAARNILINSNLVCKV 188
Query: 230 SDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLR 288
SDFGL+++ ++ TTR + +PE +A SDV+ +G+VL E+++
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-- 246
Query: 289 ALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
RP + + D IK +D + P + QL L C + +
Sbjct: 247 ---GERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLMLDCWQKDRN 292
Query: 349 HRPSMREVVETLERL 363
+RP ++V L++L
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 144/315 (45%), Gaps = 26/315 (8%)
Query: 50 GDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGS 109
G ++ + P + F + AT N D V+G G FG+V G L K P K
Sbjct: 18 GLRTFVDPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--KLPSKKEI 74
Query: 110 GTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL 169
I K+ Q ++ E + +G+ HPN++RL G + K +++V E M+ GSL
Sbjct: 75 SVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKI 229
++ L A + L+ G A G+ +L SD ++RD A NIL++ + K+
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLR---GIASGMKYL--SDMGAVHRDLAARNILINSNLVCKV 188
Query: 230 SDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLR 288
SDFGL+++ ++ TTR + +PE +A SDV+ +G+VL E+++
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-- 246
Query: 289 ALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
RP + + D IK +D + P + QL L C + +
Sbjct: 247 ---GERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLMLDCWQKDRN 292
Query: 349 HRPSMREVVETLERL 363
+RP ++V L++L
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 29/288 (10%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N D V+G G FG+V G L K P K I K+ Q ++ E + +G+
Sbjct: 17 NISIDKVVGAGEFGEVCSGRL--KLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQ 73
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGA--SVQPLAWNIRLKIAIGAA 196
HPN++RL G + K +++V E+M+ GSL++ L A +V L +R G A
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIA 128
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT-YG 255
G+ +L SD ++RD A NIL++ + K+SDFGL+++ ++ TTR
Sbjct: 129 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKF 315
+ +PE +A SDV+ +G+VL E+++ RP + + D IK
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIKA-------- 233
Query: 316 RHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+D + P + QL L C + + +RP ++V L++L
Sbjct: 234 ---VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 29/288 (10%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N D V+G G FG+V G L K P K I K+ Q ++ E + +G+
Sbjct: 34 NISIDKVVGAGEFGEVCSGRL--KLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQ 90
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGA--SVQPLAWNIRLKIAIGAA 196
HPN++RL G + K +++V E+M+ GSL++ L A +V L +R G A
Sbjct: 91 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIA 145
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT-YG 255
G+ +L SD ++RD A NIL++ + K+SDFGL+++ ++ TTR
Sbjct: 146 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 203
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKF 315
+ +PE +A SDV+ +G+VL E+++ RP + + D IK
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIKA-------- 250
Query: 316 RHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+D + P + QL L C + + +RP ++V L++L
Sbjct: 251 ---VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 136/288 (47%), Gaps = 29/288 (10%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N D V+G G FG+V G L K P K I K+ Q ++ E + +G+
Sbjct: 17 NISIDKVVGAGEFGEVCSGRL--KLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQ 73
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGA--SVQPLAWNIRLKIAIGAA 196
HPN++RL G + K +++V E M+ GSL++ L A +V L +R G A
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIA 128
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT-YG 255
G+ +L SD ++RD A NIL++ + K+SDFGL+++ ++ TTR
Sbjct: 129 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKF 315
+ +PE +A SDV+ +G+VL E+++ RP + + D IK
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIKA-------- 233
Query: 316 RHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+D + P + QL L C + + +RP ++V L++L
Sbjct: 234 ---VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 146/314 (46%), Gaps = 50/314 (15%)
Query: 68 FTFVELRAATRNF---------KSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL 118
FTF + A R F K + V+G G FG+V G L K PGK +A+K L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRL--KVPGKRE--ICVAIKTL 65
Query: 119 NSESLQGFEEWQ-----SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHL 173
+ G+ + Q SE + +G+ HPN++ L G + K ++++ E+M+ GSL+ L
Sbjct: 66 KA----GYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 121
Query: 174 F---GRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKIS 230
GR +Q L +R G G+ +L SD ++RD A NIL++ + K+S
Sbjct: 122 RKNDGRFTVIQ-LVGMLR-----GIGSGMKYL--SDMSAVHRDLAARNILVNSNLVCKVS 173
Query: 231 DFGLAKLGPSASQSHVTTRVMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRA 289
DFG++++ ++ TTR + APE +A SDV+ +G+V+ E+++
Sbjct: 174 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY--- 230
Query: 290 LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKH 349
RP + D IK I+ + P + QL L C + E
Sbjct: 231 --GERPYWDMSNQDVIKA-----------IEEGYRLPPPMDCPIALHQLMLDCWQKERSD 277
Query: 350 RPSMREVVETLERL 363
RP ++V L++L
Sbjct: 278 RPKFGQIVNMLDKL 291
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 125/296 (42%), Gaps = 34/296 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LGEG FGKVF P + ++AVK L S +++Q E L L H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDK--MLVAVKALKEASESARQDFQREAELLTMLQHQHIV 106
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQ-----------PLAWNIRLKIAIG 194
R G C E + LL+V+E+M+ G L L G + PL L +A
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A G+ +L + ++RD N L+ KI DFG+++ S V R M
Sbjct: 167 VAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRK 314
+ PE + +SDV+ FGVVL EI T + W + LS
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFT-------------YGKQPWYQ--LSNTEA 269
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
I R + + P ++ + C + EP+ R S+++V RLQA Q P
Sbjct: 270 IDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDV---HARLQALAQAP 321
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 125/296 (42%), Gaps = 34/296 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LGEG FGKVF P + ++AVK L S +++Q E L L H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDK--MLVAVKALKEASESARQDFQREAELLTMLQHQHIV 77
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQ-----------PLAWNIRLKIAIG 194
R G C E + LL+V+E+M+ G L L G + PL L +A
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A G+ +L + ++RD N L+ KI DFG+++ S V R M
Sbjct: 138 VAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRK 314
+ PE + +SDV+ FGVVL EI T + W + LS
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFT-------------YGKQPWYQ--LSNTEA 240
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
I R + + P ++ + C + EP+ R S+++V RLQA Q P
Sbjct: 241 IDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDV---HARLQALAQAP 292
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 125/296 (42%), Gaps = 34/296 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LGEG FGKVF P + ++AVK L S +++Q E L L H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDK--MLVAVKALKEASESARQDFQREAELLTMLQHQHIV 83
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQ-----------PLAWNIRLKIAIG 194
R G C E + LL+V+E+M+ G L L G + PL L +A
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A G+ +L + ++RD N L+ KI DFG+++ S V R M
Sbjct: 144 VAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRK 314
+ PE + +SDV+ FGVVL EI T + W + LS
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFT-------------YGKQPWYQ--LSNTEA 246
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
I R + + P ++ + C + EP+ R S+++V RLQA Q P
Sbjct: 247 IDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDV---HARLQALAQAP 298
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G FG+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 19 LGGGQFGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q ++ + L +A + + +L
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE- 126
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQS-HVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + + H + + APE +A
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLA 183
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ PS + L++ K Y E+
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--KDYRMER---------- 231
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 232 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 134/288 (46%), Gaps = 16/288 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES-LQGFEEWQSEVNFL 136
R K LGEG FGKV D P G+G ++AVK L ++ Q W+ E++ L
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYD---PTNDGTGEMVAVKALKADCGPQHRSGWKQEIDIL 70
Query: 137 GRLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIG 194
L H ++++ G C + +K L LV E++ GSL ++L + L L A
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQ 125
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSH-VTTRVMGT 253
G+A+LH+ + I+R+ A N+LLD KI DFGLAK P + + V
Sbjct: 126 ICEGMAYLHS--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKR 313
+ APE + Y SDV+ FGV L E+LT + + P+ L+ + ++ R
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVLR 242
Query: 314 KFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLE 361
+++ + P K ++ L C E E RP+ ++ L+
Sbjct: 243 -LTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 137/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 19 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q ++ + L +A + + +L
Sbjct: 70 VQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE- 126
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQS-HVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + + H + + APE +A
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLA 183
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ PS + L++ K Y E+
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--KDYRMER---------- 231
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 232 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 133/288 (46%), Gaps = 16/288 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES-LQGFEEWQSEVNFL 136
R K LGEG FGKV D P G+G ++AVK L ++ Q W+ E++ L
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYD---PTNDGTGEMVAVKALKADCGPQHRSGWKQEIDIL 70
Query: 137 GRLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIG 194
L H ++++ G C + +K L LV E++ GSL ++L + L L A
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQ 125
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSH-VTTRVMGT 253
G+A+LH + I+R+ A N+LLD KI DFGLAK P + + V
Sbjct: 126 ICEGMAYLHA--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKR 313
+ APE + Y SDV+ FGV L E+LT + + P+ L+ + ++ R
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVLR 242
Query: 314 KFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLE 361
+++ + P K ++ L C E E RP+ ++ L+
Sbjct: 243 -LTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 136/286 (47%), Gaps = 22/286 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSHPNL 144
LGEG FGKV D P +G +AVK L ES + + E+ L L H N+
Sbjct: 17 LGEGHFGKVELCRYD---PEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 73
Query: 145 VRLLGYCWED--KELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
V+ G C ED + L+ EF+ GSL+ +L + + +LK A+ +G+ +L
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYL 130
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVT--TRVMGTYGYAAPE 260
+ +Q ++RD A N+L++ + KI DFGL K + + R + Y APE
Sbjct: 131 GS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APE 187
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIID 320
+ Y+ SDV+ FGV L E+LT D++ S + I P + R +++
Sbjct: 188 CLMQSKFYIASDVWSFGVTLHELLT---YCDSDS-SPMALFLKMIGPTHGQMTVTR-LVN 242
Query: 321 ARLQGQ---YPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+G+ P ++ QL KC E +P +R S + ++E E L
Sbjct: 243 TLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 288
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 136/286 (47%), Gaps = 22/286 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSHPNL 144
LGEG FGKV D P +G +AVK L ES + + E+ L L H N+
Sbjct: 29 LGEGHFGKVELCRYD---PEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85
Query: 145 VRLLGYCWED--KELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
V+ G C ED + L+ EF+ GSL+ +L + + +LK A+ +G+ +L
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYL 142
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVT--TRVMGTYGYAAPE 260
+ +Q ++RD A N+L++ + KI DFGL K + + R + Y APE
Sbjct: 143 GS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APE 199
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIID 320
+ Y+ SDV+ FGV L E+LT D++ S + I P + R +++
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLT---YCDSDS-SPMALFLKMIGPTHGQMTVTR-LVN 254
Query: 321 ARLQGQ---YPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+G+ P ++ QL KC E +P +R S + ++E E L
Sbjct: 255 TLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 135/296 (45%), Gaps = 18/296 (6%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES-LQGFEEWQSEVNFL 136
R K LGEG FGKV D P G+G ++AVK L +++ Q W+ E++ L
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYD---PTNDGTGEMVAVKALKADAGPQHRSGWKQEIDIL 87
Query: 137 GRLSHPNLVRLLGYCWEDK---ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
L H ++++ G C ED L LV E++ GSL ++L + L L A
Sbjct: 88 RTLYHEHIIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQ 141
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSH-VTTRVMG 252
G+A+LH + I+RD A N+LLD KI DFGLAK P + + V
Sbjct: 142 QICEGMAYLHA--QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDS 199
Query: 253 TYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ APE + Y SDV+ FGV L E+LT + + P+ L+ + ++
Sbjct: 200 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVL 258
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQ 368
R +++ + P K ++ L C E E RP+ ++ L+ + Q
Sbjct: 259 R-LTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 126/290 (43%), Gaps = 32/290 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LGEG FGKVF +P K ++AVK L +L +++Q E L L H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDK--MLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASV------QP------LAWNIRLKIAI 193
+ G C + L++V+E+M+ G L L G QP L + L IA
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A G+ +L + + ++RD N L+ + KI DFG+++ S V M
Sbjct: 141 QIASGMVYL--ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKR 313
+ PE + +SDV+ FGV+L EI T + W + LS
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFT-------------YGKQPWFQ--LSNTE 243
Query: 314 KFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
I R+ + P ++ + L C + EP+ R +++E+ + L L
Sbjct: 244 VIECITQGRVL-ERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 137/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 19 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q ++ + L +A + + +L
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE- 126
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF--PIKWTAPESLA 183
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ PS + L++ K Y E+
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--KDYRMER---------- 231
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 232 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 138/293 (47%), Gaps = 39/293 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V+ G+ + T +AVK L S+ + + +E N + +L H LV
Sbjct: 29 LGAGQFGEVWMGYYN--------GHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLV 79
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL ++ + ++ E+M+ GSL + L + S L N L +A A G+AF+
Sbjct: 80 RLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE-- 134
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
++ I+RD +A+NIL+ + + KI+DFGLA+L + T R + + APE +
Sbjct: 135 ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAIN 191
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRA--LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
G +KSDV+ FG++L EI+T R P NL +R +R +
Sbjct: 192 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMV--- 238
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQPR 374
P ++ QL C + P+ RP+ + LE + + QP+
Sbjct: 239 -----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQ 286
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 138/293 (47%), Gaps = 39/293 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V+ G+ + T +AVK L S+ + + +E N + +L H LV
Sbjct: 27 LGAGQFGEVWMGYYN--------GHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLV 77
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL ++ + ++ E+M+ GSL + L + S L N L +A A G+AF+
Sbjct: 78 RLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE-- 132
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
++ I+RD +A+NIL+ + + KI+DFGLA+L + T R + + APE +
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAIN 189
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRA--LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
G +KSDV+ FG++L EI+T R P NL +R +R +
Sbjct: 190 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMV--- 236
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQPR 374
P ++ QL C + P+ RP+ + LE + + QP+
Sbjct: 237 -----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQ 284
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 143/316 (45%), Gaps = 28/316 (8%)
Query: 50 GDESYPNGQILPTPNLRIFTFV-ELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSG 108
G ++Y + + PN + F EL A+ K + V+G G FG+V G L K PGK
Sbjct: 16 GTKTYIDPETYEDPNRAVHQFAKELDASC--IKIERVIGAGEFGEVCSGRL--KLPGKRD 71
Query: 109 SGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGS 168
I K+ Q ++ E + +G+ HPN+V L G K +++V EFM+ G+
Sbjct: 72 VAVAIKTLKVGYTEKQR-RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGA 130
Query: 169 LENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAK 228
L+ L + L+ G A G+ +L +D ++RD A NIL++ + K
Sbjct: 131 LDAFLRKHDGQFTVIQLVGMLR---GIAAGMRYL--ADMGYVHRDLAARNILVNSNLVCK 185
Query: 229 ISDFGLAKLGPSASQS-HVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+SDFGL+++ ++ + TT + APE + SDV+ +G+V+ E+++
Sbjct: 186 VSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY- 244
Query: 288 RALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEP 347
RP + D IK I+ + P + QL L C + E
Sbjct: 245 ----GERPYWDMSNQDVIKA-----------IEEGYRLPAPMDCPAGLHQLMLDCWQKER 289
Query: 348 KHRPSMREVVETLERL 363
RP ++V L+++
Sbjct: 290 AERPKFEQIVGILDKM 305
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ-----SEVN 134
K + V+G G FG+V G L K PGK +A+K L + G+ + Q SE +
Sbjct: 16 IKIEKVIGVGEFGEVCSGRL--KVPGKRE--ICVAIKTLKA----GYTDKQRRDFLSEAS 67
Query: 135 FLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLF---GRGASVQPLAWNIRLKI 191
+G+ HPN++ L G + K ++++ E+M+ GSL+ L GR +Q L +R
Sbjct: 68 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ-LVGMLR--- 123
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
G G+ +L SD ++RD A NIL++ + K+SDFG++++ ++ TTR
Sbjct: 124 --GIGSGMKYL--SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGG 179
Query: 252 GT-YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLS 310
+ APE +A SDV+ +G+V+ E+++ RP + D IK
Sbjct: 180 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY-----GERPYWDMSNQDVIKA--- 231
Query: 311 EKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
I+ + P + QL L C + E RP ++V L++L
Sbjct: 232 --------IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 135/296 (45%), Gaps = 51/296 (17%)
Query: 83 DTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSH 141
+ ++G GGFGKV++ W+ ++ K+ A + + Q E + E L H
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKA------ARHDPDEDISQTIENVRQEAKLFAMLKH 65
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
PN++ L G C ++ L LV EF + G L L G+ + P +I + A+ ARG+ +
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK--RIPP---DILVNWAVQIARGMNY 120
Query: 202 LHT-SDKQVIYRDFKASNILL-----DGSYT---AKISDFGLAKLGPSASQSHVTTRV-- 250
LH + +I+RD K+SNIL+ +G + KI+DFGLA+ + H TT++
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRTTKMSA 174
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG---LRALDTNRPSGQHNLVDWIKP 307
G Y + APE + SDV+ +GV+L E+LTG R +D +
Sbjct: 175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA----------- 223
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ +L P A+L C +P RPS +++ L +
Sbjct: 224 --------YGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 138/289 (47%), Gaps = 45/289 (15%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLN--SESLQGFEEWQSEVNFLGRLSHP 142
+G G FG V+KG W + +AVK LN + + Q + +++EV L + H
Sbjct: 20 IGSGSFGTVYKGKWHGD-----------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 68
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N++ +GY +L +V ++ + SL +HL AS + IA ARG+ +L
Sbjct: 69 NILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYL 124
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H K +I+RD K++NI L T KI DFGLA + S SH ++ G+ + APE +
Sbjct: 125 HA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 182
Query: 263 ---ATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWI-----KPYLSEKRK 314
+ +SDVY FG+VL E++TG L + + + +++ + P LS+ R
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELMTG--QLPYSNINNRDQIIEMVGRGSLSPDLSKVRS 240
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
++ +L +CL+ + RPS ++ +E L
Sbjct: 241 ---------------NCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 138/293 (47%), Gaps = 39/293 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V+ G+ + T +AVK L S+ + + +E N + +L H LV
Sbjct: 31 LGAGQFGEVWMGYYN--------GHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLV 81
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL ++ + ++ E+M+ GSL + L + S L N L +A A G+AF+
Sbjct: 82 RLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE-- 136
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
++ I+RD +A+NIL+ + + KI+DFGLA+L + T R + + APE +
Sbjct: 137 ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEAIN 193
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRA--LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
G +KSDV+ FG++L EI+T R P NL +R +R +
Sbjct: 194 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMV--- 240
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQPR 374
P ++ QL C + P+ RP+ + LE + + QP+
Sbjct: 241 -----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQ 288
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ-----SEVN 134
K + V+G G FG+V G L K PGK +A+K L + G+ + Q SE +
Sbjct: 10 IKIEKVIGVGEFGEVCSGRL--KVPGKRE--ICVAIKTLKA----GYTDKQRRDFLSEAS 61
Query: 135 FLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLF---GRGASVQPLAWNIRLKI 191
+G+ HPN++ L G + K ++++ E+M+ GSL+ L GR +Q L +R
Sbjct: 62 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ-LVGMLR--- 117
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
G G+ +L SD ++RD A NIL++ + K+SDFG++++ ++ TTR
Sbjct: 118 --GIGSGMKYL--SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGG 173
Query: 252 GT-YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLS 310
+ APE +A SDV+ +G+V+ E+++ RP + D IK
Sbjct: 174 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY-----GERPYWDMSNQDVIKA--- 225
Query: 311 EKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
I+ + P + QL L C + E RP ++V L++L
Sbjct: 226 --------IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 138/293 (47%), Gaps = 39/293 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V+ G+ + T +AVK L S+ + + +E N + +L H LV
Sbjct: 21 LGAGQFGEVWMGYYN--------GHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLV 71
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL ++ + ++ E+M+ GSL + L + S L N L +A A G+AF+
Sbjct: 72 RLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE-- 126
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
++ I+RD +A+NIL+ + + KI+DFGLA+L + T R + + APE +
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAIN 183
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRA--LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
G +KSDV+ FG++L EI+T R P NL +R +R +
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMV--- 230
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQPR 374
P ++ QL C + P+ RP+ + LE + + QP+
Sbjct: 231 -----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQ 278
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 131/297 (44%), Gaps = 20/297 (6%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES-LQGFEEWQSEVNFL 136
R K LGEG FGKV D P G+G ++AVK L Q WQ E+ L
Sbjct: 8 RYLKKIRDLGEGHFGKVSLYCYD---PTNDGTGEMVAVKALKEGCGPQLRSGWQREIEIL 64
Query: 137 GRLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIG 194
L H ++V+ G C + +K + LV E++ GSL ++L + L L A
Sbjct: 65 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQ 119
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSH-VTTRVMGT 253
G+A+LH + I+R A N+LLD KI DFGLAK P + + V
Sbjct: 120 ICEGMAYLHA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKR 313
+ APE + Y SDV+ FGV L E+LT D+N+ S + I +
Sbjct: 178 VFWYAPECLKECKFYYASDVWSFGVTLYELLT---YCDSNQ-SPHTKFTELIGHTQGQMT 233
Query: 314 KFR--HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQ 368
R +++ + P + +I L C E E RP+ + +V L+ Q Q
Sbjct: 234 VLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 290
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 131/297 (44%), Gaps = 20/297 (6%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES-LQGFEEWQSEVNFL 136
R K LGEG FGKV D P G+G ++AVK L Q WQ E+ L
Sbjct: 9 RYLKKIRDLGEGHFGKVSLYCYD---PTNDGTGEMVAVKALKEGCGPQLRSGWQREIEIL 65
Query: 137 GRLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIG 194
L H ++V+ G C + +K + LV E++ GSL ++L + L L A
Sbjct: 66 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQ 120
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSH-VTTRVMGT 253
G+A+LH + I+R A N+LLD KI DFGLAK P + + V
Sbjct: 121 ICEGMAYLHA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKR 313
+ APE + Y SDV+ FGV L E+LT D+N+ S + I +
Sbjct: 179 VFWYAPECLKECKFYYASDVWSFGVTLYELLT---YCDSNQ-SPHTKFTELIGHTQGQMT 234
Query: 314 KFR--HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQ 368
R +++ + P + +I L C E E RP+ + +V L+ Q Q
Sbjct: 235 VLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 291
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 138/293 (47%), Gaps = 39/293 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V+ G+ + T +AVK L S+ + + +E N + +L H LV
Sbjct: 30 LGAGQFGEVWMGYYN--------GHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLV 80
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL ++ + ++ E+M+ GSL + L + S L N L +A A G+AF+
Sbjct: 81 RLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE-- 135
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
++ I+RD +A+NIL+ + + KI+DFGLA+L + T R + + APE +
Sbjct: 136 ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAIN 192
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRA--LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
G +KSDV+ FG++L EI+T R P NL +R +R +
Sbjct: 193 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMV--- 239
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQPR 374
P ++ QL C + P+ RP+ + LE + + QP+
Sbjct: 240 -----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQFQPQ 287
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 138/303 (45%), Gaps = 28/303 (9%)
Query: 63 PNLRIFTFV-ELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE 121
PN + F E+ A+ + V+G G FG+V G L K PGK I K+
Sbjct: 8 PNQAVHEFAKEIEASCITI--ERVIGAGEFGEVCSGRL--KLPGKRELPVAIKTLKVGYT 63
Query: 122 SLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQ 181
Q ++ E + +G+ HPN++ L G + K +++V E+M+ GSL+ L
Sbjct: 64 EKQR-RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFT 122
Query: 182 PLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSA 241
+ L+ G + G+ +L SD ++RD A NIL++ + K+SDFGL+++
Sbjct: 123 VIQLVGMLR---GISAGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 177
Query: 242 SQSHVTTRVMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHN 300
++ TTR + APE +A SDV+ +G+V+ E+++ RP +
Sbjct: 178 PEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSY-----GERPYWEMT 232
Query: 301 LVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL 360
D IK ++ + P + QL L C + E RP E+V L
Sbjct: 233 NQDVIKA-----------VEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNML 281
Query: 361 ERL 363
++L
Sbjct: 282 DKL 284
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 137/296 (46%), Gaps = 47/296 (15%)
Query: 81 KSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ-----SEVNF 135
K + V+G G FG+V +G L KAPGK S +A+K L G+ E Q SE +
Sbjct: 19 KIEEVIGAGEFGEVCRGRL--KAPGKKES--CVAIKTLKG----GYTERQRREFLSEASI 70
Query: 136 LGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLF---GRGASVQPLAWNIRLKIA 192
+G+ HPN++RL G ++++ EFM+ G+L++ L G+ +Q
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ----------L 120
Query: 193 IGAARGLA--FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+G RG+A + ++ ++RD A NIL++ + K+SDFGL++ S T
Sbjct: 121 VGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS 180
Query: 251 MG---TYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
+G + APE +A SD + +G+V+ E+++ RP + D I
Sbjct: 181 LGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSF-----GERPYWDMSNQDVI-- 233
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ I+ + P + QL L C + + RP +VV L+++
Sbjct: 234 ---------NAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 45/295 (15%)
Query: 81 KSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ-----SEVNF 135
K + V+G G FG+V G L K PGK +A+K L S G+ E Q SE +
Sbjct: 10 KIEQVIGAGEFGEVCSGHL--KLPGKRE--IFVAIKTLKS----GYTEKQRRDFLSEASI 61
Query: 136 LGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
+G+ HPN++ L G + ++++ EFM+ GSL++ L + L+ G
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GI 118
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMG--- 252
A G+ +L +D ++R A NIL++ + K+SDFGL++ + T +G
Sbjct: 119 AAGMKYL--ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI 176
Query: 253 TYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ APE + SDV+ +G+V+ E+++ G+ +PY
Sbjct: 177 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS----------YGE-------RPYWDMT 219
Query: 313 RKFRHIIDARLQGQY----PYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ +I+A ++ Y P + QL L C + + HRP ++V TL+++
Sbjct: 220 NQ--DVINA-IEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 149/323 (46%), Gaps = 49/323 (15%)
Query: 54 YPNGQILPTPN---LRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSG 110
Y G + PN L+ T + TR V+G G FG+V+KG L + K
Sbjct: 21 YFQGAMGSDPNQAVLKFTTEIHPSCVTRQ----KVIGAGEFGEVYKGMLKTSSGKKE--- 73
Query: 111 TVIAVKKLNSESLQGFEEWQ-----SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQ 165
+A+K L + G+ E Q E +G+ SH N++RL G + K ++++ E+M+
Sbjct: 74 VPVAIKTLKA----GYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYME 129
Query: 166 KGSLENHLFGRGA--SVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG 223
G+L+ L + SV L +R G A G+ +L ++ ++RD A NIL++
Sbjct: 130 NGALDKFLREKDGEFSVLQLVGMLR-----GIAAGMKYL--ANMNYVHRDLAARNILVNS 182
Query: 224 SYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVE 282
+ K+SDFGL++ L ++ T+ + APE ++ SDV+ FG+V+ E
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWE 242
Query: 283 ILTGLRALDTNRPSGQHNLVDWIKPY--LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSL 340
++T G+ +PY LS + I D + P I QL +
Sbjct: 243 VMT----------YGE-------RPYWELSNHEVMKAINDG-FRLPTPMDCPSAIYQLMM 284
Query: 341 KCLEAEPKHRPSMREVVETLERL 363
+C + E RP ++V L++L
Sbjct: 285 QCWQQERARRPKFADIVSILDKL 307
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 137/296 (46%), Gaps = 47/296 (15%)
Query: 81 KSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ-----SEVNF 135
K + V+G G FG+V +G L KAPGK S +A+K L G+ E Q SE +
Sbjct: 17 KIEEVIGAGEFGEVCRGRL--KAPGKKES--CVAIKTLKG----GYTERQRREFLSEASI 68
Query: 136 LGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLF---GRGASVQPLAWNIRLKIA 192
+G+ HPN++RL G ++++ EFM+ G+L++ L G+ +Q
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ----------L 118
Query: 193 IGAARGLA--FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+G RG+A + ++ ++RD A NIL++ + K+SDFGL++ S T
Sbjct: 119 VGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS 178
Query: 251 MG---TYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
+G + APE +A SD + +G+V+ E+++ RP + D I
Sbjct: 179 LGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSF-----GERPYWDMSNQDVI-- 231
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ I+ + P + QL L C + + RP +VV L+++
Sbjct: 232 ---------NAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 137/289 (47%), Gaps = 45/289 (15%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLN--SESLQGFEEWQSEVNFLGRLSHP 142
+G G FG V+KG W + +AVK LN + + Q + +++EV L + H
Sbjct: 32 IGSGSFGTVYKGKWHGD-----------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N++ +GY +L +V ++ + SL +HL AS + IA ARG+ +L
Sbjct: 81 NILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYL 136
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H K +I+RD K++NI L T KI DFGLA S SH ++ G+ + APE +
Sbjct: 137 HA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 263 ---ATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWI-----KPYLSEKRK 314
+ +SDVY FG+VL E++TG L + + + +++ + P LS+ R
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTG--QLPYSNINNRDQIIEMVGRGSLSPDLSKVRS 252
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
++ +L +CL+ + RPS ++ +E L
Sbjct: 253 ---------------NCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 42/280 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V+ G+ + T +AVK L S+ + + +E N + +L H LV
Sbjct: 23 LGAGQFGEVWMGYYN--------GHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLV 73
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL ++ + ++ E+M+ GSL + L + S L N L +A A G+AF+
Sbjct: 74 RLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE-- 128
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
++ I+RD +A+NIL+ + + KI+DFGLA+L + T R + + APE +
Sbjct: 129 ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAIN 185
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRA--LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
G +KSDV+ FG++L EI+T R P NL +R +R +
Sbjct: 186 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMV--- 232
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPS---MREVVE 358
P ++ QL C + P+ RP+ +R V+E
Sbjct: 233 -----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 135/288 (46%), Gaps = 29/288 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 36 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 148
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
FL + K+ ++RD A N +LD +T K++DFGLA+ L H T + A
Sbjct: 149 FL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 257
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
LQ +Y Y++ LKC + + RPS E+V + + ++
Sbjct: 258 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAIFST 298
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 42/280 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V+ G+ + T +AVK L S+ + + +E N + +L H LV
Sbjct: 27 LGAGQFGEVWMGYYN--------GHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLV 77
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL ++ + ++ E+M+ GSL + L + S L N L +A A G+AF+
Sbjct: 78 RLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE-- 132
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
++ I+RD +A+NIL+ + + KI+DFGLA+L + T R + + APE +
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEAIN 189
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRA--LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
G +KSDV+ FG++L EI+T R P NL +R +R +
Sbjct: 190 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMV--- 236
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPS---MREVVE 358
P ++ QL C + P+ RP+ +R V+E
Sbjct: 237 -----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 42/280 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V+ G+ + T +AVK L S+ + + +E N + +L H LV
Sbjct: 26 LGAGQFGEVWMGYYN--------GHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLV 76
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL ++ + ++ E+M+ GSL + L + S L N L +A A G+AF+
Sbjct: 77 RLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE-- 131
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
++ I+RD +A+NIL+ + + KI+DFGLA+L + T R + + APE +
Sbjct: 132 ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEAIN 188
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRA--LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
G +KSDV+ FG++L EI+T R P NL +R +R +
Sbjct: 189 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMV--- 235
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPS---MREVVE 358
P ++ QL C + P+ RP+ +R V+E
Sbjct: 236 -----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 42/280 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V+ G+ + T +AVK L S+ + + +E N + +L H LV
Sbjct: 22 LGAGQFGEVWMGYYN--------GHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLV 72
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL ++ + ++ E+M+ GSL + L + S L N L +A A G+AF+
Sbjct: 73 RLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE-- 127
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
++ I+RD +A+NIL+ + + KI+DFGLA+L + T R + + APE +
Sbjct: 128 ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAIN 184
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRA--LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
G +KSDV+ FG++L EI+T R P NL +R +R +
Sbjct: 185 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMV--- 231
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPS---MREVVE 358
P ++ QL C + P+ RP+ +R V+E
Sbjct: 232 -----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 42/280 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V+ G+ + T +AVK L S+ + + +E N + +L H LV
Sbjct: 21 LGAGQFGEVWMGYYN--------GHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLV 71
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL ++ + ++ E+M+ GSL + L + S L N L +A A G+AF+
Sbjct: 72 RLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE-- 126
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
++ I+RD +A+NIL+ + + KI+DFGLA+L + T R + + APE +
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAIN 183
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRA--LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
G +KSDV+ FG++L EI+T R P NL +R +R +
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMV--- 230
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPS---MREVVE 358
P ++ QL C + P+ RP+ +R V+E
Sbjct: 231 -----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 137/289 (47%), Gaps = 45/289 (15%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLN--SESLQGFEEWQSEVNFLGRLSHP 142
+G G FG V+KG W + +AVK LN + + Q + +++EV L + H
Sbjct: 32 IGSGSFGTVYKGKWHGD-----------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N++ +GY +L +V ++ + SL +HL AS + IA ARG+ +L
Sbjct: 81 NILLFMGYS-TAPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYL 136
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H K +I+RD K++NI L T KI DFGLA S SH ++ G+ + APE +
Sbjct: 137 HA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 263 ---ATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWI-----KPYLSEKRK 314
+ +SDVY FG+VL E++TG L + + + +++ + P LS+ R
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTG--QLPYSNINNRDQIIEMVGRGSLSPDLSKVRS 252
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
++ +L +CL+ + RPS ++ +E L
Sbjct: 253 ---------------NCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 42/280 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V+ G+ + T +AVK L S+ + + +E N + +L H LV
Sbjct: 21 LGAGQFGEVWMGYYN--------GHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLV 71
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL ++ + ++ E+M+ GSL + L + S L N L +A A G+AF+
Sbjct: 72 RLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE-- 126
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
++ I+RD +A+NIL+ + + KI+DFGLA+L + T R + + APE +
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEAIN 183
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRA--LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
G +KSDV+ FG++L EI+T R P NL +R +R +
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMV--- 230
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPS---MREVVE 358
P ++ QL C + P+ RP+ +R V+E
Sbjct: 231 -----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 42/280 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V+ G+ + T +AVK L S+ + + +E N + +L H LV
Sbjct: 16 LGAGQFGEVWMGYYN--------GHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLV 66
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL ++ + ++ E+M+ GSL + L + S L N L +A A G+AF+
Sbjct: 67 RLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE-- 121
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
++ I+RD +A+NIL+ + + KI+DFGLA+L + T R + + APE +
Sbjct: 122 ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEAIN 178
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRA--LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
G +KSDV+ FG++L EI+T R P NL +R +R +
Sbjct: 179 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMV--- 225
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPS---MREVVE 358
P ++ QL C + P+ RP+ +R V+E
Sbjct: 226 -----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 26 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q ++ + L +A + + +L
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE- 133
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 190
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 238
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 239 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 21 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q ++ + L +A + + +L
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE- 128
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 185
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 233
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 234 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 130/302 (43%), Gaps = 29/302 (9%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES-LQGFEEWQSEVNFLG 137
N + LG G FGKV + GK + +AVK L S + E SE+ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEA--TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 138 RL-SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASV------QPLAWNIRLK 190
L H N+V LLG C +L++ E+ G L N L + + +PL L
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 164
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+ A+G+AFL + K I+RD A N+LL + AKI DFGLA+ + S V
Sbjct: 165 FSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYL 309
+ APE + V+SDV+ +G++L EI + GL P +
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY----------------PGI 266
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQK 369
KF ++ Q P A I + C EP HRP+ +++ L+ D++
Sbjct: 267 LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 326
Query: 370 PK 371
+
Sbjct: 327 ER 328
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 21 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q ++ + L +A + + +L
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE- 128
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 185
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 233
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 234 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 21 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q ++ + L +A + + +L
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE- 128
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 185
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 233
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 234 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 137/293 (46%), Gaps = 39/293 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G G+V+ G+ + T +AVK L S+ + + +E N + +L H LV
Sbjct: 21 LGAGQAGEVWMGYYN--------GHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLV 71
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL ++ + ++ E+M+ GSL + L + S L N L +A A G+AF+
Sbjct: 72 RLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE-- 126
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
++ I+RD +A+NIL+ + + KI+DFGLA+L + T R + + APE +
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDAEXTAREGAKFPIKWTAPEAIN 183
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRA--LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
G +KSDV+ FG++L EI+T R P NL +R +R +
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMV--- 230
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQPR 374
P ++ QL C + P+ RP+ + LE + + QP+
Sbjct: 231 -----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQ 278
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 21 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q ++ + L +A + + +L
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE- 128
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 185
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 233
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 234 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 22 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 72
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q + + L +A + + +L
Sbjct: 73 VQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE- 129
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQS-HVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + + H + + APE +A
Sbjct: 130 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLA 186
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 234
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 235 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 26 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q + + L +A + + +L
Sbjct: 77 VQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE- 133
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 190
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 238
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 239 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 128/299 (42%), Gaps = 29/299 (9%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES-LQGFEEWQSEVNFLG 137
N + LG G FGKV + GK + +AVK L S + E SE+ +
Sbjct: 39 NLQFGKTLGAGAFGKVVEA--TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 96
Query: 138 RL-SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASV------QPLAWNIRLK 190
L H N+V LLG C +L++ E+ G L N L + + +PL L
Sbjct: 97 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 156
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+ A+G+AFL + K I+RD A N+LL + AKI DFGLA+ + S V
Sbjct: 157 FSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYL 309
+ APE + V+SDV+ +G++L EI + GL P +
Sbjct: 215 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY----------------PGI 258
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQ 368
KF ++ Q P A I + C EP HRP+ +++ L+ D+
Sbjct: 259 LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 317
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 26 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q + + L +A + + +L
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE- 133
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 190
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 238
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 239 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 26 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q + + L +A + + +L
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE- 133
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQS-HVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + + H + + APE +A
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLA 190
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 238
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 239 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 25 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 75
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q + + L +A + + +L
Sbjct: 76 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE- 132
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 133 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 189
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 190 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 237
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 238 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 26 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q + + L +A + + +L
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 135 --KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 190
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 238
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 239 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 23 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 73
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q + + L +A + + +L
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 132 --KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 187
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 235
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 236 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 21 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q + + L +A + + +L
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE- 128
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 185
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 233
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 234 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 134/288 (46%), Gaps = 29/288 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 33 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 145
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
FL + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 146 FL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 254
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
LQ +Y Y++ LKC + + RPS E+V + + ++
Sbjct: 255 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAIFST 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 134/288 (46%), Gaps = 29/288 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 40 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 152
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
FL + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 153 FL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 261
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
LQ +Y Y++ LKC + + RPS E+V + + ++
Sbjct: 262 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAIFST 302
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 134/288 (46%), Gaps = 29/288 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 147
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
FL + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 148 FL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 256
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
LQ +Y Y++ LKC + + RPS E+V + + ++
Sbjct: 257 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAIFST 297
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 23 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 73
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q + + L +A + + +L
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE- 130
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 131 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 187
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 235
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 236 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 134/288 (46%), Gaps = 29/288 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 147
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
FL + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 148 FL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 256
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
LQ +Y Y++ LKC + + RPS E+V + + ++
Sbjct: 257 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAIFST 297
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 21 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q + + L +A + + +L
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE- 128
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 185
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 233
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 234 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 34 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 84
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q + + L +A + + +L
Sbjct: 85 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE- 141
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+RD A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 142 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 198
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 199 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 246
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 247 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 134/288 (46%), Gaps = 29/288 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 36 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 148
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
FL + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 149 FL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 257
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
LQ +Y Y++ LKC + + RPS E+V + + ++
Sbjct: 258 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAIFST 298
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 136/295 (46%), Gaps = 50/295 (16%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
+ + + V+G G FG V K K +A+K++ SES + + + E+ L
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKD---------VAIKQIESESER--KAFIVELRQLS 57
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR---LKIAIG 194
R++HPN+V+L G C + LV E+ + GSL N L G +PL + + +
Sbjct: 58 RVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHG----AEPLPYYTAAHAMSWCLQ 111
Query: 195 AARGLAFLHTSD-KQVIYRDFKASNILL-DGSYTAKISDFGLAKLGPSASQSHVTTRVMG 252
++G+A+LH+ K +I+RD K N+LL G KI DFG A Q+H+T G
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNN-KG 166
Query: 253 TYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALD-TNRPSGQHNLVDWIKPYLSE 311
+ + APE + K DV+ +G++L E++T + D P+
Sbjct: 167 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA--------------- 211
Query: 312 KRKFRHIIDARLQGQYP---YKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
FR I+ A G P I L +C +P RPSM E+V+ + L
Sbjct: 212 ---FR-IMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 135/280 (48%), Gaps = 42/280 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V+ G+ + T +AVK L S+ + + +E N + +L H LV
Sbjct: 17 LGAGQFGEVWMGYYN--------GHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLV 67
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL ++ + ++ E+M+ GSL + L + S L N L +A A G+AF+
Sbjct: 68 RLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE-- 122
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
++ I+R+ +A+NIL+ + + KI+DFGLA+L + T R + + APE +
Sbjct: 123 ERNYIHRNLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEAIN 179
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRA--LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
G +KSDV+ FG++L EI+T R P NL +R +R +
Sbjct: 180 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMV--- 226
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPS---MREVVE 358
P ++ QL C + P+ RP+ +R V+E
Sbjct: 227 -----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ E++ GSL ++L + + L+
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL---LQYTSQI 126
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ-SHVTTRVMGTY 254
+G+ +L T K+ I+RD NIL++ KI DFGL K+ P + V
Sbjct: 127 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ K + LG G FG+V W+ T +AVK + S+ E + +E N +
Sbjct: 16 SLKLEKKLGAGQFGEV---WM-----ATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKT 66
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L ++ + ++ EFM KGSL + L S QPL I I A G
Sbjct: 67 LQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEG 123
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+AF+ + I+RD +A+NIL+ S KI+DFGLA++ + T R + +
Sbjct: 124 MAFIE--QRNYIHRDLRAANILVSASLVCKIADFGLARV---IEDNEYTAREGAKFPIKW 178
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILT 285
APE + G +KSDV+ FG++L+EI+T
Sbjct: 179 TAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 228 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 278
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q ++ + L +A + + +L
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE- 335
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+R+ A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 336 -KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 392
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 393 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 440
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 441 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 132/285 (46%), Gaps = 29/285 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 94 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 206
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
FL + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 207 FL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 315
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
LQ +Y Y++ LKC + + RPS E+V + +
Sbjct: 316 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 353
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 136/295 (46%), Gaps = 50/295 (16%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
+ + + V+G G FG V K K +A+K++ SES + + + E+ L
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKD---------VAIKQIESESER--KAFIVELRQLS 56
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR---LKIAIG 194
R++HPN+V+L G C + LV E+ + GSL N L G +PL + + +
Sbjct: 57 RVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHG----AEPLPYYTAAHAMSWCLQ 110
Query: 195 AARGLAFLHTSD-KQVIYRDFKASNILL-DGSYTAKISDFGLAKLGPSASQSHVTTRVMG 252
++G+A+LH+ K +I+RD K N+LL G KI DFG A Q+H+T G
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNN-KG 165
Query: 253 TYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALD-TNRPSGQHNLVDWIKPYLSE 311
+ + APE + K DV+ +G++L E++T + D P+
Sbjct: 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA--------------- 210
Query: 312 KRKFRHIIDARLQGQYP---YKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
FR I+ A G P I L +C +P RPSM E+V+ + L
Sbjct: 211 ---FR-IMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ K + LG G FG+V W+ T +AVK + S+ E + +E N +
Sbjct: 183 SLKLEKKLGAGQFGEV---WM-----ATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKT 233
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L ++ + ++ EFM KGSL + L S QPL I I A G
Sbjct: 234 LQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEG 290
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+AF+ + I+RD +A+NIL+ S KI+DFGLA++G + A
Sbjct: 291 MAFIE--QRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFP-----------IKWTA 337
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEKRKFR 316
PE + G +KSDV+ FG++L+EI+T R PY +S R
Sbjct: 338 PEAINFGSFTIKSDVWSFGILLMEIVTYGRI-----------------PYPGMSNPEVIR 380
Query: 317 HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
++ + P ++ + ++C + P+ RP+ + L+ + + Q
Sbjct: 381 -ALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXQ 435
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ K + LG G FG+V W+ T +AVK + S+ E + +E N +
Sbjct: 189 SLKLEKKLGAGQFGEV---WM-----ATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKT 239
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L ++ + ++ EFM KGSL + L S QPL I I A G
Sbjct: 240 LQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEG 296
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+AF+ + I+RD +A+NIL+ S KI+DFGLA++ + T R + +
Sbjct: 297 MAFIE--QRNYIHRDLRAANILVSASLVCKIADFGLARV---IEDNEYTAREGAKFPIKW 351
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILT 285
APE + G +KSDV+ FG++L+EI+T
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 136/287 (47%), Gaps = 47/287 (16%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 23 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 73
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q + + L +A + + +L
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE- 130
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKL-------GPSASQSHVTTRVMGTYGYA 257
K I+RD A N L+ ++ K++DFGL++L P+ ++ + +
Sbjct: 131 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK--------WT 181
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE +A +KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---- 235
Query: 317 HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 236 -----------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 136/287 (47%), Gaps = 47/287 (16%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 22 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 72
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q + + L +A + + +L
Sbjct: 73 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE- 129
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKL-------GPSASQSHVTTRVMGTYGYA 257
K I+RD A N L+ ++ K++DFGL++L P+ ++ + +
Sbjct: 130 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK--------WT 180
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE +A +KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---- 234
Query: 317 HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 235 -----------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 101/211 (47%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 13 RHLKFLRQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ EF+ GSL +L + + L+
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL---LQYTSQI 126
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ-SHVTTRVMGTY 254
+G+ +L T K+ I+RD NIL++ KI DFGL K+ P + V
Sbjct: 127 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 14 RHLKFLQQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 70
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ E++ GSL ++L + + L+
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQI 127
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ-SHVTTRVMGTY 254
+G+ +L T K+ I+RD NIL++ KI DFGL K+ P + V
Sbjct: 128 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 185
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 186 FWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 9 RHLKFLQQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 65
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ E++ GSL ++L + + L+
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQI 122
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ-SHVTTRVMGTY 254
+G+ +L T K+ I+RD NIL++ KI DFGL K+ P + V
Sbjct: 123 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 180
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 181 FWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 267 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 317
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q + + L +A + + +L
Sbjct: 318 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL-- 373
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+R+ A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 374 EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 431
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 432 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 479
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 480 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 132/285 (46%), Gaps = 29/285 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 34 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 146
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
+L + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 147 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 255
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
LQ +Y Y++ LKC + + RPS E+V + +
Sbjct: 256 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 8 RHLKFLQQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 64
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ E++ GSL ++L + + L+
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQI 121
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ-SHVTTRVMGTY 254
+G+ +L T K+ I+RD NIL++ KI DFGL K+ P + V
Sbjct: 122 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 179
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 180 FWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ E++ GSL ++L + + L+
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQI 123
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ-SHVTTRVMGTY 254
+G+ +L T K+ I+RD NIL++ KI DFGL K+ P + V
Sbjct: 124 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ E++ GSL ++L + + L+
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQI 126
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ-SHVTTRVMGTY 254
+G+ +L T K+ I+RD NIL++ KI DFGL K+ P + V
Sbjct: 127 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 15 RHLKFLQQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 71
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ E++ GSL ++L + + L+
Sbjct: 72 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQI 128
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ-SHVTTRVMGTY 254
+G+ +L T K+ I+RD NIL++ KI DFGL K+ P + V
Sbjct: 129 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 186
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 187 FWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 35/281 (12%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G +G+V++G W K S TV AVK L ++++ EE+ E + + HPNL
Sbjct: 225 LGGGQYGEVYEGVW-------KKYSLTV-AVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 275
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+LLG C + ++ EFM G+L ++L R + Q + + L +A + + +L
Sbjct: 276 VQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE- 332
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS-QSHVTTRVMGTYGYAAPEYVA 263
K I+R+ A N L+ ++ K++DFGL++L + +H + + APE +A
Sbjct: 333 -KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 389
Query: 264 TGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDAR 322
+KSDV+ FGV+L EI T G+ S + L++ K Y E+
Sbjct: 390 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMER---------- 437
Query: 323 LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P ++ +L C + P RPS E+ + E +
Sbjct: 438 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 16 RHLKFLQQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 72
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ E++ GSL ++L + + L+
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQI 129
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ-SHVTTRVMGTY 254
+G+ +L T K+ I+RD NIL++ KI DFGL K+ P + V
Sbjct: 130 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 187
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 188 FWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ E++ GSL ++L + + L+
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQI 123
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ-SHVTTRVMGTY 254
+G+ +L T K+ I+RD NIL++ KI DFGL K+ P + V
Sbjct: 124 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 17 RHLKFLQQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 73
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ E++ GSL ++L + + L+
Sbjct: 74 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQI 130
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ-SHVTTRVMGTY 254
+G+ +L T K+ I+RD NIL++ KI DFGL K+ P + V
Sbjct: 131 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 188
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 189 FWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ E++ GSL ++L + + L+
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQI 141
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ-SHVTTRVMGTY 254
+G+ +L T K+ I+RD NIL++ KI DFGL K+ P + V
Sbjct: 142 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 41 RHLKFLQQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 97
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ E++ GSL ++L + + L+
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQI 154
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ-SHVTTRVMGTY 254
+G+ +L T K+ I+RD NIL++ KI DFGL K+ P + V
Sbjct: 155 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 212
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 213 FWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 143/308 (46%), Gaps = 43/308 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G + + K + T +AVK +N S SL+ E+ +E + + + ++
Sbjct: 25 LGQGSFGMVYEG--NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNI----------RLKIAIG 194
VRLLG + + L+V E M G L+++L S++P A N +++A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYL----RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A G+A+L+ K+ ++RD A N ++ +T KI DFG+ + + +
Sbjct: 139 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEK 312
+ APE + G SD++ FGVVL EI T L +PY LS +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI-TSLAE----------------QPYQGLSNE 239
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ + ++D Q P ++ L C + PK RP+ E+V L+ D P
Sbjct: 240 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK----DDLHPSF 294
Query: 373 PRVRPTHS 380
P V HS
Sbjct: 295 PEVSFFHS 302
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ E++ GSL ++L + + L+
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQI 141
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ-SHVTTRVMGTY 254
+G+ +L T K+ I+RD NIL++ KI DFGL K+ P + V
Sbjct: 142 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 143/308 (46%), Gaps = 43/308 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G + + K + T +AVK +N S SL+ E+ +E + + + ++
Sbjct: 22 LGQGSFGMVYEG--NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNI----------RLKIAIG 194
VRLLG + + L+V E M G L+++L S++P A N +++A
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYL----RSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A G+A+L+ K+ ++RD A N ++ +T KI DFG+ + + +
Sbjct: 136 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 193
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEK 312
+ APE + G SD++ FGVVL EI T L +PY LS +
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSFGVVLWEI-TSLAE----------------QPYQGLSNE 236
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ + ++D Q P ++ L C + PK RP+ E+V L+ D P
Sbjct: 237 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK----DDLHPSF 291
Query: 373 PRVRPTHS 380
P V HS
Sbjct: 292 PEVSFFHS 299
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 131/308 (42%), Gaps = 35/308 (11%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEE-WQSEVNFLG 137
N + LG G FGKV + GK + +AVK L S + +E SE+ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEA--TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 138 RL-SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHL---------FGRGASVQP---LA 184
L H N+V LLG C +L++ E+ G L N L + S P L+
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLS 164
Query: 185 WNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQS 244
L + A+G+AFL + K I+RD A N+LL + AKI DFGLA+ + S
Sbjct: 165 SRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 245 HVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVD 303
V + APE + V+SDV+ +G++L EI + GL
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY------------- 269
Query: 304 WIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
P + KF ++ Q P A I + C EP HRP+ +++ L+
Sbjct: 270 ---PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 326
Query: 364 QASDQKPK 371
D++ +
Sbjct: 327 AQEDRRER 334
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 132/285 (46%), Gaps = 29/285 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 147
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
+L + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 148 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 256
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
LQ +Y Y++ LKC + + RPS E+V + +
Sbjct: 257 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 130/314 (41%), Gaps = 42/314 (13%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES-LQGFEEWQSEVNFL 136
N + LG G FGKV + GK + +AVK L S + E SE+ +
Sbjct: 31 NNLQFGKTLGAGAFGKVVEA--TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIM 88
Query: 137 GRL-SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASV--------------- 180
L H N+V LLG C +L++ E+ G L N L + ++
Sbjct: 89 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLD 148
Query: 181 ----QPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK 236
+PL L + A+G+AFL + K I+RD A N+LL + AKI DFGLA+
Sbjct: 149 KEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 206
Query: 237 LGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRP 295
+ S V + APE + V+SDV+ +G++L EI + GL
Sbjct: 207 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY----- 261
Query: 296 SGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMRE 355
P + KF ++ Q P A I + C EP HRP+ ++
Sbjct: 262 -----------PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQ 310
Query: 356 VVETLERLQASDQK 369
+ L+ D++
Sbjct: 311 ICSFLQEQAQEDRR 324
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 29/288 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 34 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 146
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
+L + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 147 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 255
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
LQ +Y Y++ LKC + + RPS E+V + + ++
Sbjct: 256 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAIFST 296
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 29/288 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 147
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
+L + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 148 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 256
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
LQ +Y Y++ LKC + + RPS E+V + + ++
Sbjct: 257 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAIFST 297
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 29/288 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 30 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 142
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
+L + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 143 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 251
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
LQ +Y Y++ LKC + + RPS E+V + + ++
Sbjct: 252 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAIFST 292
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 132/285 (46%), Gaps = 29/285 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 54 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 166
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
+L + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 167 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 275
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
LQ +Y Y++ LKC + + RPS E+V + +
Sbjct: 276 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 313
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 121/287 (42%), Gaps = 29/287 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LGEG FGKVF P + ++AVK L S +++ E L L H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDK--ILVAVKTLKDASDNARKDFHREAELLTNLQHEHIV 78
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRG------ASVQP---LAWNIRLKIAIGAA 196
+ G C E L++V+E+M+ G L L G A P L + L IA A
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
G+ +L + + ++RD N L+ + KI DFG+++ S V M +
Sbjct: 139 AGMVYL--ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
PE + +SDV+ GVVL EI T + W + LS
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFT-------------YGKQPWYQ--LSNNEVIE 241
Query: 317 HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
I R+ Q P ++ +L L C + EP R +++ + L+ L
Sbjct: 242 CITQGRVL-QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 132/285 (46%), Gaps = 29/285 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 53 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 165
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
+L + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 166 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 274
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
LQ +Y Y++ LKC + + RPS E+V + +
Sbjct: 275 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 29/288 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 33 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 145
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
+L + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 146 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 254
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
LQ +Y Y++ LKC + + RPS E+V + + ++
Sbjct: 255 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAIFST 295
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 130/306 (42%), Gaps = 33/306 (10%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES-LQGFEEWQSEVNFLG 137
N + LG G FGKV + GK + +AVK L S + E SE+ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEA--TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 138 RL-SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP----------LAWN 186
L H N+V LLG C +L++ E+ G L N L + ++ L+
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTR 164
Query: 187 IRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHV 246
L + A+G+AFL + K I+RD A N+LL + AKI DFGLA+ + S V
Sbjct: 165 DLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 247 TTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWI 305
+ APE + V+SDV+ +G++L EI + GL
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY--------------- 267
Query: 306 KPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQA 365
P + KF ++ Q P A I + C EP HRP+ +++ L+
Sbjct: 268 -PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326
Query: 366 SDQKPK 371
D++ +
Sbjct: 327 EDRRER 332
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 29/288 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 32 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 144
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
+L + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 145 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 253
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
LQ +Y Y++ LKC + + RPS E+V + + ++
Sbjct: 254 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAIFST 294
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ E++ GSL ++L + + L+
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQI 123
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ-SHVTTRVMGTY 254
+G+ +L T K+ I+RD NIL++ KI DFGL K+ P + V
Sbjct: 124 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI 181
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 29/288 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH 141
+ V+G G FG V+ G L + G AVK LN + G ++ +E + SH
Sbjct: 27 NEVIGRGHFGCVYHGTLLDN----DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 142 PNLVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
PN++ LLG C + L+V +M+ G L N F R + P ++ + + A+G+
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKGMK 139
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYGYAA 258
+L + K+ ++RD A N +LD +T K++DFGLA+ H T + A
Sbjct: 140 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
E + T KSDV+ FGV+L E++T P N D I YL + R+
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRRL--- 248
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
LQ +Y Y++ LKC + + RPS E+V + + ++
Sbjct: 249 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAIFST 289
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 138/292 (47%), Gaps = 45/292 (15%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLN--SESLQGFEEWQSEVNFLGRLSHP 142
+G G FG V+KG W + +AVK LN + + Q + +++EV L + H
Sbjct: 43 IGSGSFGTVYKGKWHGD-----------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 91
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N++ +GY +L +V ++ + SL +HL + + + IA A+G+ +L
Sbjct: 92 NILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYL 147
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H K +I+RD K++NI L T KI DFGLA + S SH ++ G+ + APE +
Sbjct: 148 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 205
Query: 263 ATGH---LYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLV-----DWIKPYLSEKRK 314
+SDVY FG+VL E++TG L + + + ++ ++ P LS+ R
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTG--QLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 263
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
+ +L +CL+ + RP +++ ++E L S
Sbjct: 264 ---------------NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 300
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 149/332 (44%), Gaps = 66/332 (19%)
Query: 46 SASSGDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKG-WLDEKAP 104
S SS D P+GQI T RI G G FG V+KG W +
Sbjct: 2 SDSSDDWEIPDGQI--TVGQRI-------------------GSGSFGTVYKGKWHGD--- 37
Query: 105 GKSGSGTVIAVKKLN--SESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYE 162
+AVK LN + + Q + +++EV L + H N++ +GY +L +V +
Sbjct: 38 --------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQ 88
Query: 163 FMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLD 222
+ + SL +HL + + + IA A+G+ +LH K +I+RD K++NI L
Sbjct: 89 WCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLH 143
Query: 223 GSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGH---LYVKSDVYGFGVV 279
T KI DFGLA + S SH ++ G+ + APE + +SDVY FG+V
Sbjct: 144 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 203
Query: 280 LVEILTGLRALDTNRPSGQHNLV-----DWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQ 334
L E++TG L + + + ++ ++ P LS+ R
Sbjct: 204 LYELMTG--QLPYSNINNRDQIIFMVGRGYLSPDLSKVRS---------------NCPKA 246
Query: 335 IAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
+ +L +CL+ + RP +++ ++E L S
Sbjct: 247 MKRLMAECLKKKRDERPLFPQILASIELLARS 278
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 138/292 (47%), Gaps = 45/292 (15%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLN--SESLQGFEEWQSEVNFLGRLSHP 142
+G G FG V+KG W + +AVK LN + + Q + +++EV L + H
Sbjct: 44 IGSGSFGTVYKGKWHGD-----------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 92
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N++ +GY +L +V ++ + SL +HL + + + IA A+G+ +L
Sbjct: 93 NILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYL 148
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H K +I+RD K++NI L T KI DFGLA + S SH ++ G+ + APE +
Sbjct: 149 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 263 ATGH---LYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLV-----DWIKPYLSEKRK 314
+SDVY FG+VL E++TG L + + + ++ ++ P LS+ R
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTG--QLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 264
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
+ +L +CL+ + RP +++ ++E L S
Sbjct: 265 ---------------NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 301
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPN 143
T +G G FG V+KG K + + K+ + + F+ +++EV L + H N
Sbjct: 42 TRIGSGSFGTVYKG--------KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVN 93
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ +GY +D L +V ++ + SL HL + Q + IA A+G+ +LH
Sbjct: 94 ILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQL---IDIARQTAQGMDYLH 149
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV- 262
K +I+RD K++NI L T KI DFGLA + S S + G+ + APE +
Sbjct: 150 A--KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 263 --ATGHLYVKSDVYGFGVVLVEILTG 286
+SDVY +G+VL E++TG
Sbjct: 208 MQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 140/306 (45%), Gaps = 50/306 (16%)
Query: 74 RAATRNFKS-----DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEE 128
R+ TR ++ + ++G G G+V G L + PG+ +A+K L + G+ E
Sbjct: 40 RSFTREIEASRIHIEKIIGSGDSGEVCYGRL--RVPGQRD--VPVAIKALKA----GYTE 91
Query: 129 WQ-----SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGA--SVQ 181
Q SE + +G+ HPN++RL G + ++V E+M+ GSL+ L ++
Sbjct: 92 RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM 151
Query: 182 PLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPS 240
L +R G G+ +L SD ++RD A N+L+D + K+SDFGL++ L
Sbjct: 152 QLVGMLR-----GVGAGMRYL--SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 241 ASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHN 300
++ TT + APE +A SDV+ FGVV+ E+L G+
Sbjct: 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA----------YGE-- 252
Query: 301 LVDWIKPYLSEKRKFRHIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVV 357
+PY + R +I + +G P + + QL L C + RP ++V
Sbjct: 253 -----RPYWNMTN--RDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
Query: 358 ETLERL 363
L+ L
Sbjct: 306 SVLDAL 311
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 128/291 (43%), Gaps = 31/291 (10%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVK--KLNSESLQGFEEWQSEVNFLGRLSHP 142
+LGEG FG V +G L ++ G+ +AVK KL++ S + EE+ SE + SHP
Sbjct: 41 ILGEGEFGSVMEGNLKQE----DGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHP 96
Query: 143 NLVRLLGYCWEDK-----ELLLVYEFMQKGSLENHLFGRGASVQP--LAWNIRLKIAIGA 195
N++RLLG C E + +++ FM+ G L +L P + LK +
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYG 255
A G+ +L S++ ++RD A N +L T ++DFGL+K S
Sbjct: 157 ALGMEYL--SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKF 315
+ A E +A KSDV+ FGV + EI T R + H + D YL +
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIAT--RGMTPYPGVQNHEMYD----YLLHGHRL 268
Query: 316 RHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
+ P ++ ++ C +P RP+ + LE+L S
Sbjct: 269 KQ----------PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 149/332 (44%), Gaps = 66/332 (19%)
Query: 46 SASSGDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKG-WLDEKAP 104
S SS D P+GQI T RI G G FG V+KG W +
Sbjct: 2 SDSSDDWEIPDGQI--TVGQRI-------------------GSGSFGTVYKGKWHGD--- 37
Query: 105 GKSGSGTVIAVKKLN--SESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYE 162
+AVK LN + + Q + +++EV L + H N++ +GY +L +V +
Sbjct: 38 --------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQ 88
Query: 163 FMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLD 222
+ + SL +HL + + + IA A+G+ +LH K +I+RD K++NI L
Sbjct: 89 WCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLH 143
Query: 223 GSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT---GHLYVKSDVYGFGVV 279
T KI DFGLA + S SH ++ G+ + APE + +SDVY FG+V
Sbjct: 144 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 203
Query: 280 LVEILTGLRALDTNRPSGQHNLV-----DWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQ 334
L E++TG L + + + ++ ++ P LS+ R
Sbjct: 204 LYELMTG--QLPYSNINNRDQIIFMVGRGYLSPDLSKVRS---------------NCPKA 246
Query: 335 IAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
+ +L +CL+ + RP +++ ++E L S
Sbjct: 247 MKRLMAECLKKKRDERPLFPQILASIELLARS 278
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K LG+G FG V D P + +G V+AVKKL + + +++ E+ L
Sbjct: 11 RHLKFLQQLGKGNFGSVEMCRYD---PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 67
Query: 138 RLSHPNLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L H N+V+ G C+ + L L+ E++ GSL ++L + + L+
Sbjct: 68 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQI 124
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSH-VTTRVMGTY 254
+G+ +L T K+ I+R+ NIL++ KI DFGL K+ P + + V
Sbjct: 125 CKGMEYLGT--KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI 182
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE + V SDV+ FGVVL E+ T
Sbjct: 183 FWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 138/292 (47%), Gaps = 45/292 (15%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLN--SESLQGFEEWQSEVNFLGRLSHP 142
+G G FG V+KG W + +AVK LN + + Q + +++EV L + H
Sbjct: 18 IGSGSFGTVYKGKWHGD-----------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 66
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N++ +GY +L +V ++ + SL +HL + + + IA A+G+ +L
Sbjct: 67 NILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYL 122
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H K +I+RD K++NI L T KI DFGLA + S SH ++ G+ + APE +
Sbjct: 123 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 180
Query: 263 ATGH---LYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLV-----DWIKPYLSEKRK 314
+SDVY FG+VL E++TG L + + + ++ ++ P LS+ R
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTG--QLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 238
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
+ +L +CL+ + RP +++ ++E L S
Sbjct: 239 ---------------NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 275
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 142/308 (46%), Gaps = 54/308 (17%)
Query: 74 RAATRNFKS-----DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEE 128
R+ TR ++ + ++G G G+V G L + PG+ +A+K L + G+ E
Sbjct: 40 RSFTREIEASRIHIEKIIGSGDSGEVCYGRL--RVPGQRD--VPVAIKALKA----GYTE 91
Query: 129 WQ-----SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGA--SVQ 181
Q SE + +G+ HPN++RL G + ++V E+M+ GSL+ L ++
Sbjct: 92 RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM 151
Query: 182 PLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKL---G 238
L +R G G+ +L SD ++RD A N+L+D + K+SDFGL+++
Sbjct: 152 QLVGMLR-----GVGAGMRYL--SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 239 PSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQ 298
P A+ + ++ + APE +A SDV+ FGVV+ E+L G+
Sbjct: 205 PDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA----------YGE 252
Query: 299 HNLVDWIKPYLSEKRKFRHIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMRE 355
+PY + R +I + +G P + + QL L C + RP +
Sbjct: 253 -------RPYWNMTN--RDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQ 303
Query: 356 VVETLERL 363
+V L+ L
Sbjct: 304 IVSVLDAL 311
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 138/292 (47%), Gaps = 45/292 (15%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLN--SESLQGFEEWQSEVNFLGRLSHP 142
+G G FG V+KG W + +AVK LN + + Q + +++EV L + H
Sbjct: 16 IGSGSFGTVYKGKWHGD-----------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N++ +GY +L +V ++ + SL +HL + + + IA A+G+ +L
Sbjct: 65 NILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYL 120
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H K +I+RD K++NI L T KI DFGLA + S SH ++ G+ + APE +
Sbjct: 121 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 263 AT---GHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLV-----DWIKPYLSEKRK 314
+SDVY FG+VL E++TG L + + + ++ ++ P LS+ R
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTG--QLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 236
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
+ +L +CL+ + RP +++ ++E L S
Sbjct: 237 ---------------NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 128/286 (44%), Gaps = 41/286 (14%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
+G G FG V G WL++ +A+K + E E++ E + +LSHP L
Sbjct: 15 IGSGQFGLVHLGYWLNKDK---------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL-FGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
V+L G C E + LV+EFM+ G L ++L RG A L + + G+A+L
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLE 120
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ VI+RD A N L+ + K+SDFG+ + Q +T +A+PE +
Sbjct: 121 --EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFS 177
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARL 323
KSDV+ FGV++ E+ + + PY E R +++
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKI-----------------PY--ENRSNSEVVEDIS 218
Query: 324 QGQYPYK---AAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
G YK A+ + Q+ C + P+ RP+ ++ L + AS
Sbjct: 219 TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 144/308 (46%), Gaps = 43/308 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G + + K + T +AVK +N S SL+ E+ +E + + + ++
Sbjct: 25 LGQGSFGMVYEG--NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNI----------RLKIAIG 194
VRLLG + + L+V E M G L+++L S++P A N +++A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYL----RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A G+A+L+ K+ ++RD A N ++ +T KI DFG+ + + + +
Sbjct: 139 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV 196
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEK 312
+ APE + G SD++ FGVVL EI T L +PY LS +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI-TSLAE----------------QPYQGLSNE 239
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ + ++D Q P ++ L C + PK RP+ E+V L+ D P
Sbjct: 240 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK----DDLHPSF 294
Query: 373 PRVRPTHS 380
P V HS
Sbjct: 295 PEVSFFHS 302
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 130/307 (42%), Gaps = 35/307 (11%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES-LQGFEEWQSEVNFLG 137
N + LG G FGKV + GK + +AVK L S + E SE+ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEA--TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 138 RL-SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLF--GRGASVQPLAWNIR------ 188
L H N+V LLG C +L++ E+ G L N L R P A+ I
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP-AFAIANSTAST 163
Query: 189 ---LKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSH 245
L + A+G+AFL + K I+RD A N+LL + AKI DFGLA+ + S
Sbjct: 164 RDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 246 VTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDW 304
V + APE + V+SDV+ +G++L EI + GL
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-------------- 267
Query: 305 IKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQ 364
P + KF ++ Q P A I + C EP HRP+ +++ L+
Sbjct: 268 --PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325
Query: 365 ASDQKPK 371
D++ +
Sbjct: 326 QEDRRER 332
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 142/308 (46%), Gaps = 43/308 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G + + K + T +AVK +N S SL+ E+ +E + + + ++
Sbjct: 25 LGQGSFGMVYEG--NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNI----------RLKIAIG 194
VRLLG + + L+V E M G L+++L S++P A N +++A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYL----RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A G+A+L+ K+ ++RD A N ++ +T KI DFG+ + + +
Sbjct: 139 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEK 312
+ APE + G SD++ FGVVL EI T L +PY LS +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI-TSLAE----------------QPYQGLSNE 239
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ + ++D Q P ++ L C + P RP+ E+V L+ D P
Sbjct: 240 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK----DDLHPSF 294
Query: 373 PRVRPTHS 380
P V HS
Sbjct: 295 PEVSFFHS 302
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 138/292 (47%), Gaps = 45/292 (15%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLN--SESLQGFEEWQSEVNFLGRLSHP 142
+G G FG V+KG W + +AVK LN + + Q + +++EV L + H
Sbjct: 16 IGSGSFGTVYKGKWHGD-----------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N++ +GY +L +V ++ + SL +HL + + + IA A+G+ +L
Sbjct: 65 NILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYL 120
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H K +I+RD K++NI L T KI DFGLA + S SH ++ G+ + APE +
Sbjct: 121 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 263 AT---GHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLV-----DWIKPYLSEKRK 314
+SDVY FG+VL E++TG L + + + ++ ++ P LS+ R
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTG--QLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 236
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
+ +L +CL+ + RP +++ ++E L S
Sbjct: 237 ---------------NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 143/308 (46%), Gaps = 43/308 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G + + K + T +AVK +N S SL+ E+ +E + + + ++
Sbjct: 25 LGQGSFGMVYEG--NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNI----------RLKIAIG 194
VRLLG + + L+V E M G L+++L S++P A N +++A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYL----RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A G+A+L+ K+ ++RD A N ++ +T KI DFG+ + + +
Sbjct: 139 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEK 312
+ APE + G SD++ FGVVL EI T L +PY LS +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI-TSLAE----------------QPYQGLSNE 239
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ + ++D Q P ++ L C + PK RP+ E+V L+ D P
Sbjct: 240 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK----DDLHPSF 294
Query: 373 PRVRPTHS 380
P V HS
Sbjct: 295 PEVSFFHS 302
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 105/206 (50%), Gaps = 26/206 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN--SESLQGFEEWQSEVNFLGRLSHPN 143
LG G FG+V+ G+ + + T +AVK L + S+Q F E E N + L H
Sbjct: 21 LGAGQFGEVWMGYYN--------NSTKVAVKTLKPGTMSVQAFLE---EANLMKTLQHDK 69
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGR--GASVQPLAWNIRLKIAIGAARGLAF 201
LVRL ++ + ++ E+M KGSL + L G + P + +IA G A
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA----- 124
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAP 259
+ K I+RD +A+N+L+ S KI+DFGLA++ + T R + + AP
Sbjct: 125 -YIERKNYIHRDLRAANVLVSESLMCKIADFGLARV---IEDNEYTAREGAKFPIKWTAP 180
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILT 285
E + G +KSDV+ FG++L EI+T
Sbjct: 181 EAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 131/304 (43%), Gaps = 51/304 (16%)
Query: 86 LGEGGFGKVFKGWLDEKAPG--KSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHP 142
+GEG FG+VF+ +APG T++AVK L E+ + ++Q E + +P
Sbjct: 55 IGEGAFGRVFQA----RAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHL---------------FGRGASVQ-----P 182
N+V+LLG C K + L++E+M G L L A V P
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 183 LAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS 242
L+ +L IA A G+A+L S+++ ++RD N L+ + KI+DFGL++ SA
Sbjct: 171 LSCAEQLCIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 228
Query: 243 QSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNL 301
+ PE + +SDV+ +GVVL EI + GL
Sbjct: 229 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL-------------- 274
Query: 302 VDWIKPY--LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVET 359
+PY ++ + ++ D + P ++ L C P RPS +
Sbjct: 275 ----QPYYGMAHEEVIYYVRDGNILAC-PENCPLELYNLMRLCWSKLPADRPSFCSIHRI 329
Query: 360 LERL 363
L+R+
Sbjct: 330 LQRM 333
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 143/291 (49%), Gaps = 33/291 (11%)
Query: 82 SDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS-ESLQGFEEWQSEVNFLGRLS 140
SD V+G+G FG V+ G ++A + A+K L+ +Q E + E + L+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQC----AIKSLSRITEMQQVEAFLREGLLMRGLN 80
Query: 141 HPNLVRLLGYCWEDKELL-LVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
HPN++ L+G + L ++ +M G L F R P ++ + + ARG+
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQ--FIRSPQRNPTVKDL-ISFGLQVARGM 137
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPS----ASQSHVTTRVMGTYG 255
+L ++++ ++RD A N +LD S+T K++DFGLA+ + Q H R+
Sbjct: 138 EYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--PVK 193
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKF 315
+ A E + T KSDV+ FGV+L E+LT P +H + +L++ R+
Sbjct: 194 WTALESLQTYRFTTKSDVWSFGVLLWELLT------RGAPPYRHIDPFDLTHFLAQGRRL 247
Query: 316 RHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
Q +Y + YQ+ Q +C EA+P RP+ R +V +E++ ++
Sbjct: 248 P-------QPEYCPDSLYQVMQ---QCWEADPAVRPTFRVLVGEVEQIVSA 288
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 143/308 (46%), Gaps = 43/308 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G + + K + T +AVK +N S SL+ E+ +E + + + ++
Sbjct: 24 LGQGSFGMVYEG--NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNI----------RLKIAIG 194
VRLLG + + L+V E M G L+++L S++P A N +++A
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYL----RSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A G+A+L+ K+ ++RD A N ++ +T KI DFG+ + + +
Sbjct: 138 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEK 312
+ APE + G SD++ FGVVL EI T L +PY LS +
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEI-TSLAE----------------QPYQGLSNE 238
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ + ++D Q P ++ L C + PK RP+ E+V L+ D P
Sbjct: 239 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK----DDLHPSF 293
Query: 373 PRVRPTHS 380
P V HS
Sbjct: 294 PEVSFFHS 301
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 26/206 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN--SESLQGFEEWQSEVNFLGRLSHPN 143
LG G FG+V+ G+ + + T +AVK L + S+Q F E E N + L H
Sbjct: 20 LGAGQFGEVWMGYYN--------NSTKVAVKTLKPGTMSVQAFLE---EANLMKTLQHDK 68
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGR--GASVQPLAWNIRLKIAIGAARGLAF 201
LVRL +++ + ++ EFM KGSL + L G + P + +IA G A
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA----- 123
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAP 259
+ K I+RD +A+N+L+ S KI+DFGLA++ + T R + + AP
Sbjct: 124 -YIERKNYIHRDLRAANVLVSESLMCKIADFGLARV---IEDNEYTAREGAKFPIKWTAP 179
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILT 285
E + G +KS+V+ FG++L EI+T
Sbjct: 180 EAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 137/292 (46%), Gaps = 45/292 (15%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLN--SESLQGFEEWQSEVNFLGRLSHP 142
+G G FG V+KG W + +AVK LN + + Q + +++EV L + H
Sbjct: 36 IGSGSFGTVYKGKWHGD-----------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 84
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N++ +GY +L +V ++ + SL +HL + + + IA A+G+ +L
Sbjct: 85 NILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYL 140
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H K +I+RD K++NI L T KI DFGLA S SH ++ G+ + APE +
Sbjct: 141 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 198
Query: 263 ATGH---LYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLV-----DWIKPYLSEKRK 314
+SDVY FG+VL E++TG L + + + ++ ++ P LS+ R
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTG--QLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 256
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
+ +L +CL+ + RP +++ ++E L S
Sbjct: 257 ---------------NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 293
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 137/292 (46%), Gaps = 45/292 (15%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLN--SESLQGFEEWQSEVNFLGRLSHP 142
+G G FG V+KG W + +AVK LN + + Q + +++EV L + H
Sbjct: 44 IGSGSFGTVYKGKWHGD-----------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 92
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N++ +GY +L +V ++ + SL +HL + + + IA A+G+ +L
Sbjct: 93 NILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYL 148
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H K +I+RD K++NI L T KI DFGLA S SH ++ G+ + APE +
Sbjct: 149 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 263 ATGH---LYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLV-----DWIKPYLSEKRK 314
+SDVY FG+VL E++TG L + + + ++ ++ P LS+ R
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTG--QLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 264
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
+ +L +CL+ + RP +++ ++E L S
Sbjct: 265 ---------------NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 301
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 129/292 (44%), Gaps = 39/292 (13%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
VLG+G FG+ K E +G V+ +K+L + + EV + L HPN+
Sbjct: 17 VLGKGCFGQAIKVTHRE-------TGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
++ +G ++DK L + E+++ G+L + + W+ R+ A A G+A+LH+
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ---YPWSQRVSFAKDIASGMAYLHS 126
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR------------VMG 252
+ +I+RD + N L+ + ++DFGLA+L R V+G
Sbjct: 127 MN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 253 TYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ APE + K DV+ FG+VL EI+ + A D + YL
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNA-DPD--------------YLPRT 229
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQ 364
F + L P ++++C + +P+ RPS ++ LE L+
Sbjct: 230 MDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 133/297 (44%), Gaps = 38/297 (12%)
Query: 86 LGEGGFGKVFKGW---LDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-S 140
LGEG FG+V LD+ P + T +AVK L S++ + + SE+ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRV---TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 141 HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHL---------FGRGASVQP---LAWNIR 188
H N++ LLG C +D L ++ E+ KG+L +L F S P L+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTT 248
+ A ARG+ +L + K+ I+RD A N+L+ KI+DFGLA+ TT
Sbjct: 153 VSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 249 RVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY 308
+ APE + +SDV+ FGV+L EI T L P
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT---------------LGGSPYPG 255
Query: 309 LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQA 365
+ + F+ + + + P ++ + C A P RP+ +++VE L+R+ A
Sbjct: 256 VPVEELFKLLKEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 137/292 (46%), Gaps = 45/292 (15%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLN--SESLQGFEEWQSEVNFLGRLSHP 142
+G G FG V+KG W + +AVK LN + + Q + +++EV L + H
Sbjct: 16 IGSGSFGTVYKGKWHGD-----------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N++ +GY +L +V ++ + SL +HL + + + IA A+G+ +L
Sbjct: 65 NILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYL 120
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H K +I+RD K++NI L T KI DFGLA S SH ++ G+ + APE +
Sbjct: 121 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 263 AT---GHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLV-----DWIKPYLSEKRK 314
+SDVY FG+VL E++TG L + + + ++ ++ P LS+ R
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTG--QLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 236
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
+ +L +CL+ + RP +++ ++E L S
Sbjct: 237 ---------------NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 54/321 (16%)
Query: 46 SASSGDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPG 105
S ++ DE Y +G L L++ +G+G FG V G
Sbjct: 4 SVAAQDEFYRSGWALNMKELKLLQ---------------TIGKGEFGDVMLG-------- 40
Query: 106 KSGSGTVIAVKKL-NSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKE-LLLVYEF 163
G +AVK + N + Q F +E + + +L H NLV+LLG E+K L +V E+
Sbjct: 41 -DYRGNKVAVKCIKNDATAQAF---LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96
Query: 164 MQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG 223
M KGSL ++L RG SV L + LK ++ + +L ++ ++RD A N+L+
Sbjct: 97 MAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSE 152
Query: 224 SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEI 283
AK+SDFGL K AS + T ++ + APE + KSDV+ FG++L EI
Sbjct: 153 DNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
Query: 284 LTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCL 343
+ R P + L D + P + + K +DA G P A Y++ + C
Sbjct: 208 YSFGRV-----PYPRIPLKD-VVPRVEKGYK----MDAP-DGCPP--AVYEVMK---NCW 251
Query: 344 EAEPKHRPSMREVVETLERLQ 364
+ RPS ++ E LE ++
Sbjct: 252 HLDAAMRPSFLQLREQLEHIK 272
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 116/240 (48%), Gaps = 38/240 (15%)
Query: 46 SASSGDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPG 105
+ ++ DE Y +G L L++ +G+G FG V G
Sbjct: 176 TVAAQDEFYRSGWALNMKELKLLQ---------------TIGKGEFGDVMLG-------- 212
Query: 106 KSGSGTVIAVKKL-NSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKE-LLLVYEF 163
G +AVK + N + Q F +E + + +L H NLV+LLG E+K L +V E+
Sbjct: 213 -DYRGNKVAVKCIKNDATAQAF---LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268
Query: 164 MQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG 223
M KGSL ++L RG SV L + LK ++ + +L ++ ++RD A N+L+
Sbjct: 269 MAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSE 324
Query: 224 SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEI 283
AK+SDFGL K AS + T ++ + APE + KSDV+ FG++L EI
Sbjct: 325 DNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 133/297 (44%), Gaps = 38/297 (12%)
Query: 86 LGEGGFGKVFKGW---LDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-S 140
LGEG FG+V LD+ P + T +AVK L S++ + + SE+ + +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRV---TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 141 HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGR---------GASVQP---LAWNIR 188
H N++ LLG C +D L ++ E+ KG+L +L R S P L+
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTT 248
+ A ARG+ +L + K+ I+RD A N+L+ KI+DFGLA+ TT
Sbjct: 138 VSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 249 RVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY 308
+ APE + +SDV+ FGV+L EI T + P +
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 245
Query: 309 LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQA 365
L + K H +D P ++ + C A P RP+ +++VE L+R+ A
Sbjct: 246 LFKLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
+G G FG V G WL++ +A+K + E E++ E + +LSHP L
Sbjct: 13 IGSGQFGLVHLGYWLNKDK---------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKL 62
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL-FGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
V+L G C E + LV+EFM+ G L ++L RG A L + + G+A+L
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLE 118
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ VI+RD A N L+ + K+SDFG+ + Q +T +A+PE +
Sbjct: 119 --EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFS 175
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARL 323
KSDV+ FGV++ E+ + + PY E R +++
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKI-----------------PY--ENRSNSEVVEDIS 216
Query: 324 QGQYPYK---AAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
G YK A+ + Q+ C + P+ RP+ ++ L + S
Sbjct: 217 TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
+G G FG V G WL++ +A+K + E E++ E + +LSHP L
Sbjct: 15 IGSGQFGLVHLGYWLNKDK---------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL-FGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
V+L G C E + LV+EFM+ G L ++L RG A L + + G+A+L
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLE 120
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ VI+RD A N L+ + K+SDFG+ + Q +T +A+PE +
Sbjct: 121 --EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFS 177
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARL 323
KSDV+ FGV++ E+ + + PY E R +++
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKI-----------------PY--ENRSNSEVVEDIS 218
Query: 324 QGQYPYK---AAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
G YK A+ + Q+ C + P+ RP+ ++ L + S
Sbjct: 219 TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 33/284 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG V GK +AVK + S+ +E+ E + +LSHP LV
Sbjct: 16 LGSGQFGVV--------KLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLV 66
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+ G C ++ + +V E++ G L N+L G ++P + L++ G+AFL +
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFLES- 122
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYAAPEYVAT 264
Q I+RD A N L+D K+SDFG+ + + S V T+ ++APE
Sbjct: 123 -HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF--PVKWSAPEVFHY 179
Query: 265 GHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQ 324
KSDV+ FG+++ E+ + + P + + + R +R
Sbjct: 180 FKYSSKSDVWAFGILMWEVFSLGKM-----PYDLYTNSEVVLKVSQGHRLYR-------- 226
Query: 325 GQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQ 368
P+ A+ I Q+ C P+ RP+ ++++ ++E L+ D+
Sbjct: 227 ---PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDK 267
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 133/297 (44%), Gaps = 38/297 (12%)
Query: 86 LGEGGFGKVFKGW---LDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-S 140
LGEG FG+V LD+ P + T +AVK L S++ + + SE+ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRV---TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 141 HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGA-----SVQP-------LAWNIR 188
H N++ LLG C +D L ++ E+ KG+L +L R S P L+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTT 248
+ A ARG+ +L + K+ I+RD A N+L+ KI+DFGLA+ TT
Sbjct: 153 VSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 249 RVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY 308
+ APE + +SDV+ FGV+L EI T + P +
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 260
Query: 309 LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQA 365
L + K H +D P ++ + C A P RP+ +++VE L+R+ A
Sbjct: 261 LFKLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 41/286 (14%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
+G G FG V G WL++ +A+K + S+ +++ E + +LSHP L
Sbjct: 35 IGSGQFGLVHLGYWLNKDK---------VAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKL 84
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL-FGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
V+L G C E + LV+EFM+ G L ++L RG A L + + G+A+L
Sbjct: 85 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLE 140
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ VI+RD A N L+ + K+SDFG+ + Q +T +A+PE +
Sbjct: 141 --EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFS 197
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARL 323
KSDV+ FGV++ E+ + + PY E R +++
Sbjct: 198 FSRYSSKSDVWSFGVLMWEVFSEGKI-----------------PY--ENRSNSEVVEDIS 238
Query: 324 QGQYPYK---AAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
G YK A+ + Q+ C + P+ RP+ ++ L + S
Sbjct: 239 TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 133/297 (44%), Gaps = 38/297 (12%)
Query: 86 LGEGGFGKVFKGW---LDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-S 140
LGEG FG+V LD+ P + T +AVK L S++ + + SE+ + +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRV---TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 141 HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGA-----SVQP-------LAWNIR 188
H N++ LLG C +D L ++ E+ KG+L +L R S P L+
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTT 248
+ A ARG+ +L + K+ I+RD A N+L+ KI+DFGLA+ TT
Sbjct: 146 VSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 249 RVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY 308
+ APE + +SDV+ FGV+L EI T + P +
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 253
Query: 309 LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQA 365
L + K H +D P ++ + C A P RP+ +++VE L+R+ A
Sbjct: 254 LFKLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 304
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 133/297 (44%), Gaps = 38/297 (12%)
Query: 86 LGEGGFGKVFKGW---LDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-S 140
LGEG FG+V LD+ P + T +AVK L S++ + + SE+ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRV---TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 141 HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGA-----SVQP-------LAWNIR 188
H N++ LLG C +D L ++ E+ KG+L +L R S P L+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTT 248
+ A ARG+ +L + K+ I+RD A N+L+ KI+DFGLA+ TT
Sbjct: 153 VSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 249 RVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY 308
+ APE + +SDV+ FGV+L EI T + P +
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 260
Query: 309 LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQA 365
L + K H +D P ++ + C A P RP+ +++VE L+R+ A
Sbjct: 261 LFKLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 133/297 (44%), Gaps = 38/297 (12%)
Query: 86 LGEGGFGKVFKGW---LDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-S 140
LGEG FG+V LD+ P + T +AVK L S++ + + SE+ + +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRV---TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 141 HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGA-----SVQP-------LAWNIR 188
H N++ LLG C +D L ++ E+ KG+L +L R S P L+
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTT 248
+ A ARG+ +L + K+ I+RD A N+L+ KI+DFGLA+ TT
Sbjct: 142 VSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 249 RVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY 308
+ APE + +SDV+ FGV+L EI T + P +
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 249
Query: 309 LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQA 365
L + K H +D P ++ + C A P RP+ +++VE L+R+ A
Sbjct: 250 LFKLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 300
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 133/297 (44%), Gaps = 38/297 (12%)
Query: 86 LGEGGFGKVFKGW---LDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-S 140
LGEG FG+V LD+ P + T +AVK L S++ + + SE+ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRV---TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 141 HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGR---------GASVQP---LAWNIR 188
H N++ LLG C +D L ++ E+ KG+L +L R S P L+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTT 248
+ A ARG+ +L + K+ I+RD A N+L+ KI+DFGLA+ TT
Sbjct: 153 VSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 249 RVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY 308
+ APE + +SDV+ FGV+L EI T + P +
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 260
Query: 309 LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQA 365
L + K H +D P ++ + C A P RP+ +++VE L+R+ A
Sbjct: 261 LFKLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 133/297 (44%), Gaps = 38/297 (12%)
Query: 86 LGEGGFGKVFKGW---LDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-S 140
LGEG FG+V LD+ P + T +AVK L S++ + + SE+ + +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRV---TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 141 HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGA-----SVQP-------LAWNIR 188
H N++ LLG C +D L ++ E+ KG+L +L R S P L+
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTT 248
+ A ARG+ +L + K+ I+RD A N+L+ KI+DFGLA+ TT
Sbjct: 145 VSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 249 RVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY 308
+ APE + +SDV+ FGV+L EI T + P +
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 252
Query: 309 LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQA 365
L + K H +D P ++ + C A P RP+ +++VE L+R+ A
Sbjct: 253 LFKLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 303
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 139/289 (48%), Gaps = 39/289 (13%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
+ K +G+G FG V G G +AVK + N + Q F +E + +
Sbjct: 12 KELKLLQTIGKGEFGDVMLG---------DYRGNKVAVKCIKNDATAQAF---LAEASVM 59
Query: 137 GRLSHPNLVRLLGYCWEDKE-LLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
+L H NLV+LLG E+K L +V E+M KGSL ++L RG SV L + LK ++
Sbjct: 60 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDV 117
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYG 255
+ +L ++ ++RD A N+L+ AK+SDFGL K AS + T ++
Sbjct: 118 CEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVK 170
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKF 315
+ APE + KSDV+ FG++L EI + R P + L D + P + + K
Sbjct: 171 WTAPEALREAAFSTKSDVWSFGILLWEIYSFGRV-----PYPRIPLKD-VVPRVEKGYK- 223
Query: 316 RHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQ 364
+DA G P A Y++ + C + RPS ++ E LE ++
Sbjct: 224 ---MDAP-DGCPP--AVYEVMK---NCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 143/311 (45%), Gaps = 35/311 (11%)
Query: 56 NGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIA 114
+G L T NL + + + LG G +G+V+ G W K S TV A
Sbjct: 10 SGVDLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVW-------KKYSLTV-A 61
Query: 115 VKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLF 174
VK L ++++ EE+ E + + HPNLV+LLG C + +V E+M G+L ++L
Sbjct: 62 VKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL- 119
Query: 175 GRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGL 234
R + + + + L +A + + +L K I+RD A N L+ ++ K++DFGL
Sbjct: 120 -RECNREEVTAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHVVKVADFGL 176
Query: 235 AKLGPSAS-QSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDT 292
++L + +H + + APE +A +KSDV+ FGV+L EI T G+
Sbjct: 177 SRLMTGDTYTAHAGAKF--PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 234
Query: 293 NRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPS 352
S ++L++ K Y E+ P ++ +L C + P RPS
Sbjct: 235 IDLSQVYDLLE--KGYRMEQ---------------PEGCPPKVYELMRACWKWSPADRPS 277
Query: 353 MREVVETLERL 363
E + E +
Sbjct: 278 FAETHQAFETM 288
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 132/297 (44%), Gaps = 38/297 (12%)
Query: 86 LGEGGFGKVFKG---WLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-S 140
LGEG FG+V LD+ P + T +AVK L S++ + + SE+ + +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRV---TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 141 HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR------------ 188
H N++ LLG C +D L ++ E+ KG+L +L R ++N
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTT 248
+ A ARG+ +L + K+ I+RD A N+L+ KI+DFGLA+ TT
Sbjct: 194 VSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 249 RVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY 308
+ APE + +SDV+ FGV+L EI T L P
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT---------------LGGSPYPG 296
Query: 309 LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQA 365
+ + F+ + + + P ++ + C A P RP+ +++VE L+R+ A
Sbjct: 297 VPVEELFKLLKEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 139/289 (48%), Gaps = 39/289 (13%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
+ K +G+G FG V G G +AVK + N + Q F +E + +
Sbjct: 6 KELKLLQTIGKGEFGDVMLG---------DYRGNKVAVKCIKNDATAQAF---LAEASVM 53
Query: 137 GRLSHPNLVRLLGYCWEDKE-LLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
+L H NLV+LLG E+K L +V E+M KGSL ++L RG SV L + LK ++
Sbjct: 54 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDV 111
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYG 255
+ +L ++ ++RD A N+L+ AK+SDFGL K AS + T ++
Sbjct: 112 CEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVK 164
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKF 315
+ APE + KSDV+ FG++L EI + R P + L D + P + + K
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV-----PYPRIPLKD-VVPRVEKGYK- 217
Query: 316 RHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQ 364
+DA G P A Y++ + C + RPS ++ E LE ++
Sbjct: 218 ---MDAP-DGCPP--AVYEVMK---NCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 126/286 (44%), Gaps = 41/286 (14%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
+G G FG V G WL++ +A+K + E E++ E + +LSHP L
Sbjct: 18 IGSGQFGLVHLGYWLNKDK---------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKL 67
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL-FGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
V+L G C E + LV+EFM+ G L ++L RG A L + + G+A+L
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLE 123
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ VI+RD A N L+ + K+SDFG+ + Q +T +A+PE +
Sbjct: 124 --EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFS 180
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARL 323
KSDV+ FGV++ E+ + + PY E R +++
Sbjct: 181 FSRYSSKSDVWSFGVLMWEVFSEGKI-----------------PY--ENRSNSEVVEDIS 221
Query: 324 QGQYPYK---AAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
G YK A+ + Q+ C P+ RP+ ++ L + S
Sbjct: 222 TGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 142/308 (46%), Gaps = 43/308 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G + + K + T +AVK +N S SL+ E+ +E + + + ++
Sbjct: 25 LGQGSFGMVYEG--NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNI----------RLKIAIG 194
VRLLG + + L+V E M G L+++L S++P A N +++A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYL----RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A G+A+L+ K+ ++R+ A N ++ +T KI DFG+ + + +
Sbjct: 139 IADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEK 312
+ APE + G SD++ FGVVL EI T L +PY LS +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI-TSLAE----------------QPYQGLSNE 239
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ + ++D Q P ++ L C + P RP+ E+V L+ D P
Sbjct: 240 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK----DDLHPSF 294
Query: 373 PRVRPTHS 380
P V HS
Sbjct: 295 PEVSFFHS 302
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 142/308 (46%), Gaps = 43/308 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G + + K + T +AVK +N S SL+ E+ +E + + + ++
Sbjct: 26 LGQGSFGMVYEG--NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 83
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNI----------RLKIAIG 194
VRLLG + + L+V E M G L+++L S++P A N +++A
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYL----RSLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A G+A+L+ K+ ++R+ A N ++ +T KI DFG+ + + +
Sbjct: 140 IADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEK 312
+ APE + G SD++ FGVVL EI T L +PY LS +
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEI-TSLAE----------------QPYQGLSNE 240
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ + ++D Q P ++ L C + P RP+ E+V L+ D P
Sbjct: 241 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK----DDLHPSF 295
Query: 373 PRVRPTHS 380
P V HS
Sbjct: 296 PEVSFFHS 303
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G K K T +A+K +N + S++ E+ +E + + + ++
Sbjct: 18 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 75
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL------FGRGASVQPLAWNIRLKIAIGAARG 198
VRLLG + + L++ E M +G L+++L + P + + +++A A G
Sbjct: 76 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+A+L+ + + ++RD A N ++ +T KI DFG+ + + + + +
Sbjct: 136 MAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEKRKFR 316
PE + G SDV+ FGVVL EI T +PY LS ++ R
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEIATLAE-----------------QPYQGLSNEQVLR 236
Query: 317 HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLE 361
+++ L + P + +L C + PK RPS E++ +++
Sbjct: 237 FVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 32/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-SHPN 143
LGEG FG+V K +AVK L ++ + + SE+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR------------LKI 191
++ LLG C +D L ++ E+ KG+L +L R +++I +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
ARG+ +L + ++ I+RD A N+L+ + KI+DFGLA+ + TT
Sbjct: 163 TYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE 311
+ APE + +SDV+ FGV++ EI T L P +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------------LGGSPYPGIPV 265
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ F+ + + + P ++ + C A P RP+ +++VE L+R+
Sbjct: 266 EELFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
+G G FG V G WL++ +A+K + E E++ E + +LSHP L
Sbjct: 16 IGSGQFGLVHLGYWLNKDK---------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKL 65
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL-FGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
V+L G C E + LV EFM+ G L ++L RG A L + + G+A+L
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLE 121
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ VI+RD A N L+ + K+SDFG+ + Q +T +A+PE +
Sbjct: 122 --EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFS 178
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARL 323
KSDV+ FGV++ E+ + + PY E R +++
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFSEGKI-----------------PY--ENRSNSEVVEDIS 219
Query: 324 QGQYPYK---AAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
G YK A+ + Q+ C P+ RP+ ++ L + S
Sbjct: 220 TGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 32/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-SHPN 143
LGEG FG+V K +AVK L ++ + + SE+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR------------LKI 191
++ LLG C +D L ++ E+ KG+L +L R +++I +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
ARG+ +L + ++ I+RD A N+L+ + KI+DFGLA+ + TT
Sbjct: 163 TYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE 311
+ APE + +SDV+ FGV++ EI T L P +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------------LGGSPYPGIPV 265
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ F+ + + + P ++ + C A P RP+ +++VE L+R+
Sbjct: 266 EELFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 135/300 (45%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 268 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 318
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KGSL + L +G + + L + +A A G
Sbjct: 319 LRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASG 375
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 376 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKW 430
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 471
Query: 317 HIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C EP+ RP+ + LE S + QP
Sbjct: 472 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQP 531
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G K K T +A+K +N + S++ E+ +E + + + ++
Sbjct: 27 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL------FGRGASVQPLAWNIRLKIAIGAARG 198
VRLLG + + L++ E M +G L+++L + P + + +++A A G
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+A+L+ + + ++RD A N ++ +T KI DFG+ + + + + +
Sbjct: 145 MAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEKRKFR 316
PE + G SDV+ FGVVL EI T +PY LS ++ R
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAE-----------------QPYQGLSNEQVLR 245
Query: 317 HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLE 361
+++ L + P + +L C + PK RPS E++ +++
Sbjct: 246 FVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 135/300 (45%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 185 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 235
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KGSL + L +G + + L + +A A G
Sbjct: 236 LRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASG 292
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 293 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKW 347
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 388
Query: 317 HIIDARLQGQ---YPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C EP+ RP+ + LE S + QP
Sbjct: 389 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQP 448
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 135/300 (45%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 9 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 59
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KGSL + L +G + + L + +A A G
Sbjct: 60 LRHEKLVQLYAVVSEEP-IXIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASG 116
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 117 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIKW 171
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 172 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 212
Query: 317 HIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C EP+ RP+ + LE S + QP
Sbjct: 213 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 272
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 32/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-SHPN 143
LGEG FG+V K +AVK L ++ + + SE+ + + H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR------------LKI 191
++ LLG C +D L ++ E+ KG+L +L R +++I +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
ARG+ +L + ++ I+RD A N+L+ + KI+DFGLA+ + TT
Sbjct: 209 TYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 266
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE 311
+ APE + +SDV+ FGV++ EI T L P +
Sbjct: 267 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------------LGGSPYPGIPV 311
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ F+ + + + P ++ + C A P RP+ +++VE L+R+
Sbjct: 312 EELFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G K K T +A+K +N + S++ E+ +E + + + ++
Sbjct: 33 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL------FGRGASVQPLAWNIRLKIAIGAARG 198
VRLLG + + L++ E M +G L+++L + P + + +++A A G
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+A+L+ + + ++RD A N ++ +T KI DFG+ + + + + +
Sbjct: 151 MAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEKRKFR 316
PE + G SDV+ FGVVL EI T +PY LS ++ R
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAE-----------------QPYQGLSNEQVLR 251
Query: 317 HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLE 361
+++ L + P + +L C + PK RPS E++ +++
Sbjct: 252 FVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 135/300 (45%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 185 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 235
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KGSL + L +G + + L + +A A G
Sbjct: 236 LRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASG 292
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 293 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKW 347
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 388
Query: 317 HIIDARLQGQ---YPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C EP+ RP+ + LE S + QP
Sbjct: 389 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 448
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G K K T +A+K +N + S++ E+ +E + + + ++
Sbjct: 23 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 80
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL------FGRGASVQPLAWNIRLKIAIGAARG 198
VRLLG + + L++ E M +G L+++L + P + + +++A A G
Sbjct: 81 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+A+L+ + + ++RD A N ++ +T KI DFG+ + + + + +
Sbjct: 141 MAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 198
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEKRKFR 316
PE + G SDV+ FGVVL EI T +PY LS ++ R
Sbjct: 199 PESLKDGVFTTYSDVWSFGVVLWEIATLAE-----------------QPYQGLSNEQVLR 241
Query: 317 HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLE 361
+++ L + P + +L C + PK RPS E++ +++
Sbjct: 242 FVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 285
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 32/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-SHPN 143
LGEG FG+V K +AVK L ++ + + SE+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR------------LKI 191
++ LLG C +D L ++ E+ KG+L +L R +++I +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
ARG+ +L + ++ I+RD A N+L+ + KI+DFGLA+ + TT
Sbjct: 163 TYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE 311
+ APE + +SDV+ FGV++ EI T L P +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------------LGGSPYPGIPV 265
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ F+ + + + P ++ + C A P RP+ +++VE L+R+
Sbjct: 266 EELFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 32/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-SHPN 143
LGEG FG+V K +AVK L ++ + + SE+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR------------LKI 191
++ LLG C +D L ++ E+ KG+L +L R +++I +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
ARG+ +L + ++ I+RD A N+L+ + KI+DFGLA+ + TT
Sbjct: 163 TYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE 311
+ APE + +SDV+ FGV++ EI T L P +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------------LGGSPYPGIPV 265
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ F+ + + + P ++ + C A P RP+ +++VE L+R+
Sbjct: 266 EELFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 43/294 (14%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V W+ G T +A+K L ++ E + E + +L H LV
Sbjct: 17 LGNGQFGEV---WM-----GTWNGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLV 67
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHL---FGRGASVQPLAWNIRLKIAIGAARGLAFL 202
+L E+ + +V E+M KGSL + L GR + L + +A A G+A++
Sbjct: 68 QLYAVVSEEP-IYIVTEYMNKGSLLDFLKDGEGRALKLPNL-----VDMAAQVAAGMAYI 121
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPE 260
+ I+RD +++NIL+ KI+DFGLA+L + T R + + APE
Sbjct: 122 ERMN--YIHRDLRSANILVGNGLICKIADFGLARL---IEDNEXTARQGAKFPIKWTAPE 176
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLS-EKRKFRHII 319
G +KSDV+ FG++L E++T R PY R+ +
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVTKGRV-----------------PYPGMNNREVLEQV 219
Query: 320 DARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
+ + P + +L + C + +P+ RP+ + LE + + QP
Sbjct: 220 ERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATEPQYQP 273
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 132/300 (44%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 16 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 66
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KGSL + L G L + + I A G
Sbjct: 67 LRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQI--ASG 123
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 124 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKW 178
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 219
Query: 317 HIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C EP+ RP+ + LE S + QP
Sbjct: 220 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 279
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 139/304 (45%), Gaps = 31/304 (10%)
Query: 67 IFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQG 125
+F E A LG+G FG V++G K K T +A+K +N + S++
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRE 62
Query: 126 FEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHL------FGRGAS 179
E+ +E + + + ++VRLLG + + L++ E M +G L+++L
Sbjct: 63 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 122
Query: 180 VQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGP 239
+ P + + +++A A G+A+L+ + + ++RD A N ++ +T KI DFG+ +
Sbjct: 123 LAPPSLSKMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 240 SASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQH 299
+ + + +PE + G SDV+ FGVVL EI T
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE----------- 229
Query: 300 NLVDWIKPY--LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVV 357
+PY LS ++ R +++ L + P + +L C + PK RPS E++
Sbjct: 230 ------QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
Query: 358 ETLE 361
+++
Sbjct: 283 SSIK 286
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 32/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-SHPN 143
LGEG FG+V K +AVK L ++ + + SE+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR------------LKI 191
++ LLG C +D L ++ E+ KG+L +L R +++I +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
ARG+ +L + ++ I+RD A N+L+ + KI+DFGLA+ + TT
Sbjct: 163 TYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGR 220
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE 311
+ APE + +SDV+ FGV++ EI T L P +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------------LGGSPYPGIPV 265
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ F+ + + + P ++ + C A P RP+ +++VE L+R+
Sbjct: 266 EELFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 32/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-SHPN 143
LGEG FG+V K +AVK L ++ + + SE+ + + H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR------------LKI 191
++ LLG C +D L ++ E+ KG+L +L R +++I +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
ARG+ +L + ++ I+RD A N+L+ + KI+DFGLA+ + TT
Sbjct: 150 TYQLARGMEYL--ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 207
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE 311
+ APE + +SDV+ FGV++ EI T L P +
Sbjct: 208 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------------LGGSPYPGIPV 252
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ F+ + + + P ++ + C A P RP+ +++VE L+R+
Sbjct: 253 EELFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 135/300 (45%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 185 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 235
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KGSL + L +G + + L + +A A G
Sbjct: 236 LRHEKLVQLYAVVSEEP-IYIVGEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASG 292
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 293 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKW 347
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 388
Query: 317 HIIDARLQGQ---YPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C EP+ RP+ + LE S + QP
Sbjct: 389 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQP 448
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 135/300 (45%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 12 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 62
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KGSL + L +G + + L + +A A G
Sbjct: 63 LRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASG 119
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 120 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKW 174
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 175 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 215
Query: 317 HIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C EP+ RP+ + LE S + QP
Sbjct: 216 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 275
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 32/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-SHPN 143
LGEG FG+V K +AVK L ++ + + SE+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR------------LKI 191
++ LLG C +D L ++ E+ KG+L +L R +++I +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
ARG+ +L + ++ I+RD A N+L+ + KI+DFGLA+ + TT
Sbjct: 163 TYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE 311
+ APE + +SDV+ FGV++ EI T L P +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------------LGGSPYPGIPV 265
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ F+ + + + P ++ + C A P RP+ +++VE L+R+
Sbjct: 266 EELFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 134/301 (44%), Gaps = 43/301 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTV-IAVKKLNSESLQGFEEWQSEVNFLG 137
+ + + LG+G FG+V+ G + +GT +A+K L ++ E + E +
Sbjct: 16 SLRLEVKLGQGCFGEVWMG---------TWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMK 65
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
+L H LV+L E+ + +V E+M KGSL + L G L + + I A
Sbjct: 66 KLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQI--AS 122
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--G 255
G+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R +
Sbjct: 123 GMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEWTARQGAKFPIK 177
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKF 315
+ APE G +KSDV+ FG++L E+ T R PY
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN-- 218
Query: 316 RHIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
R ++D +G P + + L +C EP+ RP+ + LE S + Q
Sbjct: 219 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQ 278
Query: 373 P 373
P
Sbjct: 279 P 279
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 32/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-SHPN 143
LGEG FG+V K +AVK L ++ + + SE+ + + H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR------------LKI 191
++ LLG C +D L ++ E+ KG+L +L R +++I +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
ARG+ +L + ++ I+RD A N+L+ + KI+DFGLA+ + TT
Sbjct: 155 TYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 212
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE 311
+ APE + +SDV+ FGV++ EI T L P +
Sbjct: 213 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------------LGGSPYPGIPV 257
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ F+ + + + P ++ + C A P RP+ +++VE L+R+
Sbjct: 258 EELFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 32/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-SHPN 143
LGEG FG+V K +AVK L ++ + + SE+ + + H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR------------LKI 191
++ LLG C +D L ++ E+ KG+L +L R +++I +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
ARG+ +L + ++ I+RD A N+L+ + KI+DFGLA+ + TT
Sbjct: 152 TYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 209
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE 311
+ APE + +SDV+ FGV++ EI T L P +
Sbjct: 210 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------------LGGSPYPGIPV 254
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ F+ + + + P ++ + C A P RP+ +++VE L+R+
Sbjct: 255 EELFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G K K T +A+K +N + S++ E+ +E + + + ++
Sbjct: 26 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL------FGRGASVQPLAWNIRLKIAIGAARG 198
VRLLG + + L++ E M +G L+++L + P + + +++A A G
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+A+L+ + + ++RD A N ++ +T KI DFG+ + + + + +
Sbjct: 144 MAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEKRKFR 316
PE + G SDV+ FGVVL EI T +PY LS ++ R
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAE-----------------QPYQGLSNEQVLR 244
Query: 317 HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLE 361
+++ L + P + +L C + PK RPS E++ +++
Sbjct: 245 FVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G K K T +A+K +N + S++ E+ +E + + + ++
Sbjct: 33 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL------FGRGASVQPLAWNIRLKIAIGAARG 198
VRLLG + + L++ E M +G L+++L + P + + +++A A G
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+A+L+ + + ++RD A N ++ +T KI DFG+ + + + + +
Sbjct: 151 MAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEKRKFR 316
PE + G SDV+ FGVVL EI T +PY LS ++ R
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAE-----------------QPYQGLSNEQVLR 251
Query: 317 HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLE 361
+++ L + P + +L C + PK RPS E++ +++
Sbjct: 252 FVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 123/287 (42%), Gaps = 33/287 (11%)
Query: 83 DTVLGE----GGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLG 137
D VLGE G FG+VF G L T++AVK + ++ E L
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRL-------RADNTLVAVKSCRETLPPDLKAKFLQEARILK 167
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
+ SHPN+VRL+G C + + + +V E +Q G L GA L L++ AA
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKTLLQMVGDAAA 224
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ +L + K I+RD A N L+ KISDFG+++ + +
Sbjct: 225 GMEYLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT 282
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRH 317
APE + G +SDV+ FG++L E + L P LS ++ R
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFS---------------LGASPYPNLSNQQT-RE 326
Query: 318 IIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQ 364
++ + P + +L +C EP RPS + + L+ ++
Sbjct: 327 FVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G K K T +A+K +N + S++ E+ +E + + + ++
Sbjct: 55 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 112
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL------FGRGASVQPLAWNIRLKIAIGAARG 198
VRLLG + + L++ E M +G L+++L + P + + +++A A G
Sbjct: 113 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+A+L+ + + ++RD A N ++ +T KI DFG+ + + + + +
Sbjct: 173 MAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 230
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEKRKFR 316
PE + G SDV+ FGVVL EI T +PY LS ++ R
Sbjct: 231 PESLKDGVFTTYSDVWSFGVVLWEIATLAE-----------------QPYQGLSNEQVLR 273
Query: 317 HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLE 361
+++ L + P + +L C + PK RPS E++ +++
Sbjct: 274 FVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G K K T +A+K +N + S++ E+ +E + + + ++
Sbjct: 20 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL------FGRGASVQPLAWNIRLKIAIGAARG 198
VRLLG + + L++ E M +G L+++L + P + + +++A A G
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+A+L+ + + ++RD A N ++ +T KI DFG+ + + + + +
Sbjct: 138 MAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEKRKFR 316
PE + G SDV+ FGVVL EI T +PY LS ++ R
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAE-----------------QPYQGLSNEQVLR 238
Query: 317 HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLE 361
+++ L + P + +L C + PK RPS E++ +++
Sbjct: 239 FVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 127/292 (43%), Gaps = 32/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-SHPN 143
LGEG FG+V K +AVK L ++ + + SE+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR------------LKI 191
++ LLG C +D L ++ E+ KG+L +L R +++I +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
ARG+ +L + ++ I+RD A N+L+ + +I+DFGLA+ + TT
Sbjct: 163 TYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGR 220
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE 311
+ APE + +SDV+ FGV++ EI T L P +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------------LGGSPYPGIPV 265
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ F+ + + + P ++ + C A P RP+ +++VE L+R+
Sbjct: 266 EELFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G K K T +A+K +N + S++ E+ +E + + + ++
Sbjct: 26 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL------FGRGASVQPLAWNIRLKIAIGAARG 198
VRLLG + + L++ E M +G L+++L + P + + +++A A G
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+A+L+ + + ++RD A N ++ +T KI DFG+ + + + + +
Sbjct: 144 MAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEKRKFR 316
PE + G SDV+ FGVVL EI T +PY LS ++ R
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAE-----------------QPYQGLSNEQVLR 244
Query: 317 HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLE 361
+++ L + P + +L C + PK RPS E++ +++
Sbjct: 245 FVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G K K T +A+K +N + S++ E+ +E + + + ++
Sbjct: 27 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL------FGRGASVQPLAWNIRLKIAIGAARG 198
VRLLG + + L++ E M +G L+++L + P + + +++A A G
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+A+L+ + + ++RD A N ++ +T KI DFG+ + + + + +
Sbjct: 145 MAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 202
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEKRKFR 316
PE + G SDV+ FGVVL EI T +PY LS ++ R
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAE-----------------QPYQGLSNEQVLR 245
Query: 317 HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLE 361
+++ L + P + +L C + PK RPS E++ +++
Sbjct: 246 FVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LGE FGKV+KG L APG+ I K +E EE++ E RL HPN+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR-EEFRHEAMLRARLQHPNVV 92
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRG---------------ASVQPLAWNIRLK 190
LLG +D+ L +++ + G L L R ++++P + +
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF---VH 149
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+ A G+ +L S V+++D N+L+ KISD GL + +A +
Sbjct: 150 LVAQIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 207
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ + APE + G + SD++ +GVVL E+ +
Sbjct: 208 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 120/288 (41%), Gaps = 41/288 (14%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LGE FGKV+KG L APG+ I K +E EE++ E RL HPN+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR-EEFRHEAMLRARLQHPNVV 75
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRG---------------ASVQPLAWNIRLK 190
LLG +D+ L +++ + G L L R ++++P + +
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF---VH 132
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+ A G+ +L S V+++D N+L+ KISD GL + +A +
Sbjct: 133 LVAQIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 190
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYL 309
+ + APE + G + SD++ +GVVL E+ + GL +PY
Sbjct: 191 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL------------------QPYC 232
Query: 310 S-EKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREV 356
+ +I R P + L ++C P RP +++
Sbjct: 233 GYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 123/287 (42%), Gaps = 33/287 (11%)
Query: 83 DTVLGE----GGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLG 137
D VLGE G FG+VF G L T++AVK + ++ E L
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRL-------RADNTLVAVKSCRETLPPDLKAKFLQEARILK 167
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
+ SHPN+VRL+G C + + + +V E +Q G L GA L L++ AA
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKTLLQMVGDAAA 224
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ +L + K I+RD A N L+ KISDFG+++ + +
Sbjct: 225 GMEYLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT 282
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRH 317
APE + G +SDV+ FG++L E + L P LS ++ R
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFS---------------LGASPYPNLSNQQT-RE 326
Query: 318 IIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQ 364
++ + P + +L +C EP RPS + + L+ ++
Sbjct: 327 FVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 19 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 69
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KGSL + L G L + + I A G
Sbjct: 70 LRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASG 126
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 127 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIKW 181
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 222
Query: 317 HIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C +P+ RP+ + LE S + QP
Sbjct: 223 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 19 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 69
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KGSL + L G L + + I A G
Sbjct: 70 LRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASG 126
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 127 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKW 181
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 222
Query: 317 HIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C +P+ RP+ + LE S + QP
Sbjct: 223 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G FG V++G K K T +A+K +N + S++ E+ +E + + + ++
Sbjct: 20 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHL------FGRGASVQPLAWNIRLKIAIGAARG 198
VRLLG + + L++ E M +G L+++L + P + + +++A A G
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+A+L+ + + ++RD A N + +T KI DFG+ + + + + +
Sbjct: 138 MAYLNAN--KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPY--LSEKRKFR 316
PE + G SDV+ FGVVL EI T +PY LS ++ R
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAE-----------------QPYQGLSNEQVLR 238
Query: 317 HIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLE 361
+++ L + P + +L C + PK RPS E++ +++
Sbjct: 239 FVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 19 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 69
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KGSL + L G L + + I A G
Sbjct: 70 LRHEKLVQLYAVVSEEP-IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASG 126
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 127 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKW 181
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 222
Query: 317 HIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C +P+ RP+ + LE S + QP
Sbjct: 223 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 144/314 (45%), Gaps = 51/314 (16%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFL 136
+N LGEG FGKV K G++G T +AVK L + S + SE N L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA-TAFHLKGRAGY-TTVAVKMLKENASPSELRDLLSEFNVL 80
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL-----ENHLFGRG-------------- 177
+++HP++++L G C +D LLL+ E+ + GSL E+ G G
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 178 -ASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK 236
+ L + A ++G+ +L ++ ++++RD A NIL+ KISDFGL++
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 237 LGPSASQSHVTTRVMGTYGYAAPEYVATGHLY-----VKSDVYGFGVVLVEILTGLRALD 291
+ V + G +++A L+ +SDV+ FGV+L EI+T L
Sbjct: 199 -----DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LG 249
Query: 292 TNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRP 351
N G I P + +++ + + P + ++ +L L+C + EP RP
Sbjct: 250 GNPYPG-------IPP-----ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
Query: 352 SMREVVETLERLQA 365
++ + LE++
Sbjct: 298 VFADISKDLEKMMV 311
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 19 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 69
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KGSL + L G L + + I A G
Sbjct: 70 LRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASG 126
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 127 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKW 181
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 222
Query: 317 HIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C +P+ RP+ + LE S + QP
Sbjct: 223 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 10 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 60
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KGSL + L G L + + I A G
Sbjct: 61 LRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASG 117
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 118 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKW 172
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 213
Query: 317 HIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C +P+ RP+ + LE S + QP
Sbjct: 214 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQP 273
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 8 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 58
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KGSL + L G L + + I A G
Sbjct: 59 LRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASG 115
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 116 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKW 170
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 171 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 211
Query: 317 HIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C +P+ RP+ + LE S + QP
Sbjct: 212 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQP 271
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 126/292 (43%), Gaps = 32/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-SHPN 143
LGEG FG+V K +AVK L ++ + + SE+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR------------LKI 191
++ LLG C +D L ++ + KG+L +L R +++I +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
ARG+ +L + ++ I+RD A N+L+ + KI+DFGLA+ + TT
Sbjct: 163 TYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE 311
+ APE + +SDV+ FGV++ EI T L P +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------------LGGSPYPGIPV 265
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ F+ + + + P ++ + C A P RP+ +++VE L+R+
Sbjct: 266 EELFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 144/314 (45%), Gaps = 51/314 (16%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFL 136
+N LGEG FGKV K G++G T +AVK L + S + SE N L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA-TAFHLKGRAGY-TTVAVKMLKENASPSELRDLLSEFNVL 80
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL-----ENHLFGRG-------------- 177
+++HP++++L G C +D LLL+ E+ + GSL E+ G G
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 178 -ASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK 236
+ L + A ++G+ +L ++ ++++RD A NIL+ KISDFGL++
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 237 LGPSASQSHVTTRVMGTYGYAAPEYVATGHLY-----VKSDVYGFGVVLVEILTGLRALD 291
+ V + G +++A L+ +SDV+ FGV+L EI+T L
Sbjct: 199 -----DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LG 249
Query: 292 TNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRP 351
N G I P + +++ + + P + ++ +L L+C + EP RP
Sbjct: 250 GNPYPG-------IPP-----ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
Query: 352 SMREVVETLERLQA 365
++ + LE++
Sbjct: 298 VFADISKDLEKMMV 311
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 34/293 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+G F K+FKG E T + +K L+ E + + + +LSH +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
G C+ E +LV EF++ GSL+ +L + + + W +L++A A + FL
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNCINILW--KLEVAKQLAWAMHFL--E 130
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGT-YGYAAPEYVA 263
+ +I+ + A NILL K + KL P S + + ++ + PE +
Sbjct: 131 ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 264 T-GHLYVKSDVYGFGVVLVEILTG----LRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
+L + +D + FG L EI +G L ALD+ R K E R
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-----------KLQFYEDRH---- 235
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPK 371
Q P A ++A L C++ EP HRPS R ++ L L D P+
Sbjct: 236 -------QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR 281
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 143/314 (45%), Gaps = 51/314 (16%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFL 136
+N LGEG FGKV K G++G T +AVK L + S + SE N L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA-TAFHLKGRAGY-TTVAVKMLKENASPSELRDLLSEFNVL 80
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL-----ENHLFGRG-------------- 177
+++HP++++L G C +D LLL+ E+ + GSL E+ G G
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 178 -ASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK 236
+ L + A ++G+ +L ++ +++RD A NIL+ KISDFGL++
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYL--AEMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 237 LGPSASQSHVTTRVMGTYGYAAPEYVATGHLY-----VKSDVYGFGVVLVEILTGLRALD 291
+ V + G +++A L+ +SDV+ FGV+L EI+T L
Sbjct: 199 -----DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LG 249
Query: 292 TNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRP 351
N G I P + +++ + + P + ++ +L L+C + EP RP
Sbjct: 250 GNPYPG-------IPP-----ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
Query: 352 SMREVVETLERLQA 365
++ + LE++
Sbjct: 298 VFADISKDLEKMMV 311
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 132/300 (44%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 19 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 69
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
+ H LV+L E+ + +V E+M KGSL + L G L + + I A G
Sbjct: 70 IRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASG 126
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 127 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKW 181
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 222
Query: 317 HIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C +P+ RP+ + LE S + QP
Sbjct: 223 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 19 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 69
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KG L + L G L + + I A G
Sbjct: 70 LRHEKLVQLYAVVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQI--ASG 126
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 127 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKW 181
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 222
Query: 317 HIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C +P+ RP+ + LE S + QP
Sbjct: 223 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE---SLQGFEEWQ 130
+ + ++F+ LG G FG+V +G A+K L E L+ E
Sbjct: 2 KYSLQDFQILRTLGTGSFGRV-------HLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN 54
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
E L ++HP ++R+ G + +++ ++ ++++ G L + L P+A +
Sbjct: 55 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAE 114
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+ + L +LH+ D +IYRD K NILLD + KI+DFG AK P VT +
Sbjct: 115 VCLA----LEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXL 163
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE V+T D + FG+++ E+L G
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 126/292 (43%), Gaps = 32/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRL-SHPN 143
LGEG FG+V K +AVK L ++ + + SE+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR------------LKI 191
++ LLG C +D L ++ + KG+L +L R +++I +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
ARG+ +L + ++ I+RD A N+L+ + KI+DFGLA+ + TT
Sbjct: 163 TYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE 311
+ APE + +SDV+ FGV++ EI T L P +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------------LGGSPYPGIPV 265
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+ F+ + + + P ++ + C A P RP+ +++VE L+R+
Sbjct: 266 EELFKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 132/308 (42%), Gaps = 58/308 (18%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK ++G GGFG+VFK + GK+ VI K N+E + EV L +
Sbjct: 12 DFKEIELIGSGGFGQVFKA--KHRIDGKT---YVIKRVKYNNEKAE------REVKALAK 60
Query: 139 LSHPNLVRLLGYCWE-----------------DKELLLVYEFMQKGSLENHLFGRGASVQ 181
L H N+V G CW+ K L + EF KG+LE + R +
Sbjct: 61 LDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--E 117
Query: 182 PLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSA 241
L + L++ +G+ ++H+ K++I RD K SNI L + KI DFGL S
Sbjct: 118 KLDKVLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLV---TSL 172
Query: 242 SQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
R GT Y +PE +++ + D+Y G++L E+ L DT + +
Sbjct: 173 KNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL---LHVCDTAFETSKF-- 227
Query: 302 VDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLE 361
F + D + + K + +L L +P+ RP+ E++ TL
Sbjct: 228 -------------FTDLRDGIISDIFDKKEKTLLQKL----LSKKPEDRPNTSEILRTLT 270
Query: 362 RLQASDQK 369
+ S +K
Sbjct: 271 VWKKSPEK 278
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 124/301 (41%), Gaps = 48/301 (15%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPG--KSGSGTVIAVKKLNSESLQGFEE-WQSEVN 134
N + VLG G FGKV ++ A G K+G +AVK L ++ E SE+
Sbjct: 45 ENLEFGKVLGSGAFGKV----MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 135 FLGRL-SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHL-------------------F 174
+ +L SH N+V LLG C + L++E+ G L N+L
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 175 GRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGL 234
+ L + L A A+G+ FL K ++RD A N+L+ KI DFGL
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGL 218
Query: 235 AKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNR 294
A+ S S V + APE + G +KSDV+ +G++L EI + L N
Sbjct: 219 ARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS----LGVN- 273
Query: 295 PSGQHNLVDWIKPY--LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPS 352
PY + F +I + P+ A +I + C + + RPS
Sbjct: 274 ------------PYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS 321
Query: 353 M 353
Sbjct: 322 F 322
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 125/295 (42%), Gaps = 39/295 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPG--KSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRL-SH 141
LG G FGKV ++ A G KS + +AVK L S L E SE+ L L +H
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASV--------------QPLAWNI 187
N+V LLG C L++ E+ G L N L + S L
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 188 RLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVT 247
L + A+G+AFL + K I+RD A NILL KI DFGLA+ + S V
Sbjct: 163 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 248 TRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
+ APE + +SDV+ +G+ L E+ + L P
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYP 265
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLER 362
+ KF +I + P A ++ + C +A+P RP+ +++V+ +E+
Sbjct: 266 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 320
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 19 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 69
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KGSL + L G L + + I A G
Sbjct: 70 LRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASG 126
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 127 MAYVERMN--YVHRDLAAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKW 181
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 222
Query: 317 HIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C +P+ RP+ + LE S + QP
Sbjct: 223 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 19 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKK 69
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KG L + L G L + + I A G
Sbjct: 70 LRHEKLVQLYAVVSEEP-IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQI--ASG 126
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGLA+L + T R + +
Sbjct: 127 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKW 181
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 222
Query: 317 HIIDARLQG---QYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C +P+ RP+ + LE S + QP
Sbjct: 223 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 125/295 (42%), Gaps = 39/295 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPG--KSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRL-SH 141
LG G FGKV ++ A G KS + +AVK L S L E SE+ L L +H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASV--------------QPLAWNI 187
N+V LLG C L++ E+ G L N L + S L
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 188 RLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVT 247
L + A+G+AFL + K I+RD A NILL KI DFGLA+ + S V
Sbjct: 170 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 248 TRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
+ APE + +SDV+ +G+ L E+ + L P
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYP 272
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLER 362
+ KF +I + P A ++ + C +A+P RP+ +++V+ +E+
Sbjct: 273 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 41/300 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+ + + LG+G FG+V W+ G T +A+K L ++ E + E + +
Sbjct: 186 SLRLEVKLGQGCFGEV---WM-----GTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKK 236
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L H LV+L E+ + +V E+M KGSL + L G L + + I A G
Sbjct: 237 LRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASG 293
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GY 256
+A++ + ++RD +A+NIL+ + K++DFGL +L + T R + +
Sbjct: 294 MAYVERMN--YVHRDLRAANILVGENLVCKVADFGLGRL---IEDNEYTARQGAKFPIKW 348
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
APE G +KSDV+ FG++L E+ T R PY R
Sbjct: 349 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN--R 389
Query: 317 HIIDARLQGQ---YPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQP 373
++D +G P + + L +C +P+ RP+ + LE S + QP
Sbjct: 390 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQXQP 449
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 125/295 (42%), Gaps = 39/295 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPG--KSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRL-SH 141
LG G FGKV ++ A G KS + +AVK L S L E SE+ L L +H
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASV--------------QPLAWNI 187
N+V LLG C L++ E+ G L N L + S L
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 188 RLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVT 247
L + A+G+AFL + K I+RD A NILL KI DFGLA+ + S V
Sbjct: 147 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 248 TRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
+ APE + +SDV+ +G+ L E+ + L P
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYP 249
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLER 362
+ KF +I + P A ++ + C +A+P RP+ +++V+ +E+
Sbjct: 250 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 134/291 (46%), Gaps = 35/291 (12%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK-LNSESLQGFEEW-QSEVNFLGRLSHP 142
++GEG +G V K +G ++A+KK L S+ + ++ E+ L +L H
Sbjct: 32 LVGEGSYGMVMKC-------RNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLEN-HLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
NLV LL C + K LV+EF+ L++ LF G L + + K G+ F
Sbjct: 85 NLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGIGF 139
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEY 261
H+ + +I+RD K NIL+ S K+ DFG A+ A+ V + T Y APE
Sbjct: 140 CHSHN--IIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRAPEL 195
Query: 262 VATGHLYVKS-DVYGFGVVLVEILTG--LRALDTNRPSGQH------NLVDWIKPYLSEK 312
+ Y K+ DV+ G ++ E+ G L D++ H NL+ + ++
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255
Query: 313 RKFRHI----IDAR--LQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVV 357
F + I R L+ +YP K + + L+ KCL +P RP E++
Sbjct: 256 PVFAGVRLPEIKEREPLERRYP-KLSEVVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 125/295 (42%), Gaps = 39/295 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPG--KSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRL-SH 141
LG G FGKV ++ A G KS + +AVK L S L E SE+ L L +H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASV--------------QPLAWNI 187
N+V LLG C L++ E+ G L N L + S L
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 188 RLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVT 247
L + A+G+AFL + K I+RD A NILL KI DFGLA+ + S V
Sbjct: 170 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 248 TRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
+ APE + +SDV+ +G+ L E+ + L P
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYP 272
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLER 362
+ KF +I + P A ++ + C +A+P RP+ +++V+ +E+
Sbjct: 273 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 127/293 (43%), Gaps = 34/293 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+G F K+FKG E T + +K L+ E + + + +LSH +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
G C E +LV EF++ GSL+ +L + + + W +L++A A + FL
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILW--KLEVAKQLAAAMHFLE-- 130
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGT-YGYAAPEYVA 263
+ +I+ + A NILL K + KL P S + + ++ + PE +
Sbjct: 131 ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 264 T-GHLYVKSDVYGFGVVLVEILTG----LRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
+L + +D + FG L EI +G L ALD+ R K E R
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-----------KLQFYEDRH---- 235
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPK 371
Q P A ++A L C++ EP HRPS R ++ L L D P+
Sbjct: 236 -------QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR 281
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 125/295 (42%), Gaps = 39/295 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPG--KSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRL-SH 141
LG G FGKV ++ A G KS + +AVK L S L E SE+ L L +H
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASV--------------QPLAWNI 187
N+V LLG C L++ E+ G L N L + S L
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 188 RLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVT 247
L + A+G+AFL + K I+RD A NILL KI DFGLA+ + S V
Sbjct: 165 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 248 TRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
+ APE + +SDV+ +G+ L E+ + L P
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYP 267
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLER 362
+ KF +I + P A ++ + C +A+P RP+ +++V+ +E+
Sbjct: 268 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 322
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG GG V+ D K + + E+L+ FE EV+ +LSH N+V
Sbjct: 19 LGGGGMSTVYLAE-DTILNIKVAIKAIFIPPREKEETLKRFER---EVHNSSQLSHQNIV 74
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
++ ED LV E+++ +L ++ G PL+ + + G+ H
Sbjct: 75 SMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIK--HAH 128
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATG 265
D ++++RD K NIL+D + T KI DFG+AK S + T V+GT Y +PE
Sbjct: 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKGE 187
Query: 266 HLYVKSDVYGFGVVLVEILTG 286
+D+Y G+VL E+L G
Sbjct: 188 ATDECTDIYSIGIVLYEMLVG 208
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 135/320 (42%), Gaps = 41/320 (12%)
Query: 55 PNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVI 113
P+G LRI EL+ VLG G FG V+KG W+ E K +
Sbjct: 22 PSGTAPNQAQLRILKETELKRVK-------VLGSGAFGTVYKGIWVPEGETVK----IPV 70
Query: 114 AVKKLNSES-LQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENH 172
A+K LN + + E+ E + + HP+LVRLLG C + LV + M G L +
Sbjct: 71 AIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEY 129
Query: 173 LFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDF 232
+ ++ + L + A+G+ +L ++++++RD A N+L+ KI+DF
Sbjct: 130 VHEHKDNI---GSQLLLNWCVQIAKGMMYL--EERRLVHRDLAARNVLVKSPNHVKITDF 184
Query: 233 GLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDT 292
GLA+L + + + A E + +SDV+ +GV + E++T
Sbjct: 185 GLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTF------ 238
Query: 293 NRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQ---YPYKAAYQIAQLSLKCLEAEPKH 349
G KPY + R I D +G+ P + + +KC +
Sbjct: 239 ---GG--------KPY--DGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADS 285
Query: 350 RPSMREVVETLERLQASDQK 369
RP +E+ R+ Q+
Sbjct: 286 RPKFKELAAEFSRMARDPQR 305
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 134/321 (41%), Gaps = 71/321 (22%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK ++G GGFG+VFK + GK+ VI K N+E + EV L +
Sbjct: 13 DFKEIELIGSGGFGQVFKA--KHRIDGKT---YVIRRVKYNNEKAE------REVKALAK 61
Query: 139 LSHPNLVRLLGYCWE------------------------------DKELLLVYEFMQKGS 168
L H N+V G CW+ K L + EF KG+
Sbjct: 62 LDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGT 120
Query: 169 LENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAK 228
LE + R + L + L++ +G+ ++H+ K++I+RD K SNI L + K
Sbjct: 121 LEQWIEKRRG--EKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNIFLVDTKQVK 176
Query: 229 ISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLR 288
I DFGL S TR GT Y +PE +++ + D+Y G++L E+ L
Sbjct: 177 IGDFGLV---TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL---LH 230
Query: 289 ALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
DT + + F + D + + K + +L L +P+
Sbjct: 231 VCDTAFETSKF---------------FTDLRDGIISDIFDKKEKTLLQKL----LSKKPE 271
Query: 349 HRPSMREVVETLERLQASDQK 369
RP+ E++ TL + S +K
Sbjct: 272 DRPNTSEILRTLTVWKKSPEK 292
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 35/244 (14%)
Query: 56 NGQILPTPNLRIFTFVELRAATRNFKSDTV------LGEGGFGKVFKGWLDEKAPGKSGS 109
+G L T NL + + TR+ + LG+G FGKV+K A K S
Sbjct: 9 SGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYK------AQNKETS 62
Query: 110 GTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL 169
+ A K ++++S + E++ E++ L HPN+V+LL + + L ++ EF G++
Sbjct: 63 -VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV 121
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNIL--LDGSYTA 227
+ + +PL + + L +LH D ++I+RD KA NIL LDG
Sbjct: 122 DAVMLELE---RPLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDG---- 172
Query: 228 KISDFGLAKLGPSASQSHVTTR---VMGTYGYAAPEYVATGH-----LYVKSDVYGFGVV 279
D LA G SA + R +GT + APE V K+DV+ G+
Sbjct: 173 ---DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 280 LVEI 283
L+E+
Sbjct: 230 LIEM 233
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 99/223 (44%), Gaps = 21/223 (9%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL---QGFEEWQ 130
R +F VLG+G FGKV + G+ + A+K L + + E
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLA-------DRKGTEELYAIKILKKDVVIQDDDVECTM 67
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKE-LLLVYEFMQKGSLENHLFGRGASVQPLAWNIRL 189
E L L P + L C++ + L V E++ G L H+ G +P A
Sbjct: 68 VEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAA 127
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
+I+IG L FLH + +IYRD K N++LD KI+DFG+ K VTTR
Sbjct: 128 EISIG----LFFLHK--RGIIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTR 178
Query: 250 -VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALD 291
GT Y APE +A D + +GV+L E+L G D
Sbjct: 179 EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 35/244 (14%)
Query: 56 NGQILPTPNLRIFTFVELRAATRNFKSDTV------LGEGGFGKVFKGWLDEKAPGKSGS 109
+G L T NL + + TR+ + LG+G FGKV+K A K S
Sbjct: 9 SGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYK------AQNKETS 62
Query: 110 GTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL 169
+ A K ++++S + E++ E++ L HPN+V+LL + + L ++ EF G++
Sbjct: 63 -VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV 121
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNIL--LDGSYTA 227
+ + +PL + + L +LH D ++I+RD KA NIL LDG
Sbjct: 122 DAVMLELE---RPLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDG---- 172
Query: 228 KISDFGLAKLGPSASQSHVTTR---VMGTYGYAAPEYVATGH-----LYVKSDVYGFGVV 279
D LA G SA + R +GT + APE V K+DV+ G+
Sbjct: 173 ---DIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 280 LVEI 283
L+E+
Sbjct: 230 LIEM 233
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+G FGKV+K +G + A K + ++S + E++ E+ L HP +V
Sbjct: 27 LGDGAFGKVYKA-------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIV 79
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHL--FGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+LLG + D +L ++ EF G+++ + RG + + R + L FLH
Sbjct: 80 KLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLH 134
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ K++I+RD KA N+L+ +++DFG++ Q +GT + APE V
Sbjct: 135 S--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR--DSFIGTPYWMAPEVVM 190
Query: 264 TGHLY-----VKSDVYGFGVVLVEI 283
+ K+D++ G+ L+E+
Sbjct: 191 CETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 132/310 (42%), Gaps = 41/310 (13%)
Query: 65 LRIFTFVELRAATRNFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSES- 122
LRI EL+ VLG G FG V+KG W+ E K +A+K LN +
Sbjct: 9 LRILKETELKRVK-------VLGSGAFGTVYKGIWVPEGETVK----IPVAIKILNETTG 57
Query: 123 LQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP 182
+ E+ E + + HP+LVRLLG C + LV + M G L ++ ++
Sbjct: 58 PKANVEFMDEALIMASMDHPHLVRLLGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNI-- 114
Query: 183 LAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS 242
+ L + A+G+ +L ++++++RD A N+L+ KI+DFGLA+L
Sbjct: 115 -GSQLLLNWCVQIAKGMMYL--EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 171
Query: 243 QSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLV 302
+ + + A E + +SDV+ +GV + E++T G
Sbjct: 172 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTF---------GG----- 217
Query: 303 DWIKPYLSEKRKFRHIIDARLQGQ---YPYKAAYQIAQLSLKCLEAEPKHRPSMREVVET 359
KPY + R I D +G+ P + + +KC + RP +E+
Sbjct: 218 ---KPY--DGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 272
Query: 360 LERLQASDQK 369
R+ Q+
Sbjct: 273 FSRMARDPQR 282
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 35/244 (14%)
Query: 56 NGQILPTPNLRIFTFVELRAATRNFKSDTV------LGEGGFGKVFKGWLDEKAPGKSGS 109
+G L T NL + + TR+ + LG+G FGKV+K A K S
Sbjct: 9 SGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYK------AQNKETS 62
Query: 110 GTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL 169
+ A K ++++S + E++ E++ L HPN+V+LL + + L ++ EF G++
Sbjct: 63 -VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV 121
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNIL--LDGSYTA 227
+ + +PL + + L +LH D ++I+RD KA NIL LDG
Sbjct: 122 DAVMLELE---RPLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDG---- 172
Query: 228 KISDFGLAKLGPSASQSHVTTR---VMGTYGYAAPEYVATGH-----LYVKSDVYGFGVV 279
D LA G SA + R +GT + APE V K+DV+ G+
Sbjct: 173 ---DIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 280 LVEI 283
L+E+
Sbjct: 230 LIEM 233
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+G FGKV+K +G + A K + ++S + E++ E+ L HP +V
Sbjct: 19 LGDGAFGKVYKA-------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIV 71
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHL--FGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+LLG + D +L ++ EF G+++ + RG + + R + L FLH
Sbjct: 72 KLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLH 126
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ K++I+RD KA N+L+ +++DFG++ Q +GT + APE V
Sbjct: 127 S--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR--DSFIGTPYWMAPEVVM 182
Query: 264 TGHLY-----VKSDVYGFGVVLVEI 283
+ K+D++ G+ L+E+
Sbjct: 183 CETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 135/310 (43%), Gaps = 55/310 (17%)
Query: 66 RIFTFVELRAATRNFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSES-L 123
RIF ELR VLG G FG V KG W+ E K + +K + +S
Sbjct: 26 RIFKETELRKLK-------VLGSGVFGTVHKGVWIPEGESIK----IPVCIKVIEDKSGR 74
Query: 124 QGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP- 182
Q F+ + +G L H ++VRLLG C L LV +++ GSL +H+ ++ P
Sbjct: 75 QSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQ 133
Query: 183 --LAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPS 240
L W +++ A+G+ +L + +++R+ A N+LL +++DFG+A L P
Sbjct: 134 LLLNWGVQI------AKGMYYL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 185
Query: 241 ASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-------GLRALDTN 293
+ + + + A E + G +SDV+ +GV + E++T GLR +
Sbjct: 186 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV- 244
Query: 294 RPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSM 353
P L EK + RL P + + +KC + RP+
Sbjct: 245 -------------PDLLEKGE-------RL--AQPQICTIDVYMVMVKCWMIDENIRPTF 282
Query: 354 REVVETLERL 363
+E+ R+
Sbjct: 283 KELANEFTRM 292
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 129/301 (42%), Gaps = 44/301 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS-ESLQGFEEWQSEVNFLG 137
+ K V+GEG FG+V K + K G A+K++ S ++ E+ L
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIK-----KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 80
Query: 138 RLSH-PNLVRLLGYCWEDKELLLVYEFMQKGSLENHL-----------FG-RGASVQPLA 184
+L H PN++ LLG C L L E+ G+L + L F ++ L+
Sbjct: 81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 185 WNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQS 244
L A ARG+ +L S KQ I+RD A NIL+ +Y AKI+DFGL++ Q
Sbjct: 141 SQQLLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR-----GQE 193
Query: 245 HVTTRVMGT--YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLV 302
+ MG + A E + SDV+ +GV+L EI++ G
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS----------LGGTPYC 243
Query: 303 DWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLER 362
L EK + + + P ++ L +C +P RPS +++ +L R
Sbjct: 244 GMTCAELYEK------LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 297
Query: 363 L 363
+
Sbjct: 298 M 298
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ +G + L Q L+ + A
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-------QKLSKFDEQRTA 116
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 117 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 170
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 214
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 215 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 129/301 (42%), Gaps = 44/301 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS-ESLQGFEEWQSEVNFLG 137
+ K V+GEG FG+V K + K G A+K++ S ++ E+ L
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIK-----KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 70
Query: 138 RLSH-PNLVRLLGYCWEDKELLLVYEFMQKGSLENHL-----------FG-RGASVQPLA 184
+L H PN++ LLG C L L E+ G+L + L F ++ L+
Sbjct: 71 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 130
Query: 185 WNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQS 244
L A ARG+ +L S KQ I+RD A NIL+ +Y AKI+DFGL++ Q
Sbjct: 131 SQQLLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR-----GQE 183
Query: 245 HVTTRVMGT--YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLV 302
+ MG + A E + SDV+ +GV+L EI++ G
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS----------LGGTPYC 233
Query: 303 DWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLER 362
L EK + + + P ++ L +C +P RPS +++ +L R
Sbjct: 234 GMTCAELYEK------LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 287
Query: 363 L 363
+
Sbjct: 288 M 288
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 21/243 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG---FEEWQSEVNF 135
+FK +LG+G F V++ +G +A+K ++ +++ + Q+EV
Sbjct: 12 DFKVGNLLGKGSFAGVYRAE-------SIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKI 64
Query: 136 LGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
+L HP+++ L Y + + LV E G + +L R V+P + N
Sbjct: 65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR---VKPFSENEARHFMHQI 121
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYG 255
G+ +LH+ +++RD SN+LL + KI+DFGLA + H T + GT
Sbjct: 122 ITGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPN 177
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHN---LVDWIKP-YLSE 311
Y +PE ++SDV+ G + +L G DT+ N L D+ P +LS
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSI 237
Query: 312 KRK 314
+ K
Sbjct: 238 EAK 240
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 135/310 (43%), Gaps = 55/310 (17%)
Query: 66 RIFTFVELRAATRNFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSES-L 123
RIF ELR VLG G FG V KG W+ E K + +K + +S
Sbjct: 8 RIFKETELRKLK-------VLGSGVFGTVHKGVWIPEGESIK----IPVCIKVIEDKSGR 56
Query: 124 QGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP- 182
Q F+ + +G L H ++VRLLG C L LV +++ GSL +H+ ++ P
Sbjct: 57 QSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQ 115
Query: 183 --LAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPS 240
L W +++ A+G+ +L + +++R+ A N+LL +++DFG+A L P
Sbjct: 116 LLLNWGVQI------AKGMYYL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167
Query: 241 ASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-------GLRALDTN 293
+ + + + A E + G +SDV+ +GV + E++T GLR +
Sbjct: 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV- 226
Query: 294 RPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSM 353
P L EK + RL P + + +KC + RP+
Sbjct: 227 -------------PDLLEKGE-------RL--AQPQICTIDVYMVMVKCWMIDENIRPTF 264
Query: 354 REVVETLERL 363
+E+ R+
Sbjct: 265 KELANEFTRM 274
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 129/301 (42%), Gaps = 48/301 (15%)
Query: 79 NFKSDTVLGEGGFGKVFKG--WLDEKAPGKSGSGTVIAVKKLNSESL---QGFEEWQSEV 133
NF+ + +G G F +V++ LD G +A+KK+ L + + E+
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLD---------GVPVALKKVQIFDLMDAKARADCIKEI 83
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHL--FGRGASVQP--LAWNIRL 189
+ L +L+HPN+++ ED EL +V E G L + F + + P W +
Sbjct: 84 DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
++ A H ++V++RD K +N+ + + K+ D GL + +S++
Sbjct: 144 QLCS------ALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAHS 195
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
++GT Y +PE + KSD++ G +L E + AL + P+
Sbjct: 196 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE----MAALQS--------------PFY 237
Query: 310 SEKRKFRHIIDARLQGQYP----YKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQA 365
+K + Q YP + ++ QL C+ +P+ RP + V + +R+ A
Sbjct: 238 GDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297
Query: 366 S 366
Sbjct: 298 C 298
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 111
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 112 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TE 165
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 209
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 210 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 84
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 137
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 138 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 191
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 235
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 236 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 116
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 117 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 170
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 171 LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 214
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 215 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 132/313 (42%), Gaps = 47/313 (15%)
Query: 65 LRIFTFVELRAATRNFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSES 122
LRI ELR VLG G FG V+KG W+ P +A+K L + S
Sbjct: 11 LRILKETELRKVK-------VLGSGAFGTVYKGIWI----PDGENVKIPVAIKVLRENTS 59
Query: 123 LQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLF---GRGAS 179
+ +E E + + P + RLLG C + LV + M G L +H+ GR S
Sbjct: 60 PKANKEILDEAYVMAGVGSPYVSRLLGICLT-STVQLVTQLMPYGCLLDHVRENRGRLGS 118
Query: 180 VQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGP 239
L W +++ A+G+++L D ++++RD A N+L+ KI+DFGLA+L
Sbjct: 119 QDLLNWCMQI------AKGMSYLE--DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD 170
Query: 240 SASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQH 299
+ + A E + +SDV+ +GV + E++T
Sbjct: 171 IDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTF------------- 217
Query: 300 NLVDWIKPYLSEKRKFRHIIDARLQGQ---YPYKAAYQIAQLSLKCLEAEPKHRPSMREV 356
KPY + R I D +G+ P + + +KC + + RP RE+
Sbjct: 218 ----GAKPY--DGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFREL 271
Query: 357 VETLERLQASDQK 369
V R+ Q+
Sbjct: 272 VSEFSRMARDPQR 284
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 42/280 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
+GEG FGK E G VI ++ S + EE + EV L + HPN+V
Sbjct: 32 IGEGSFGKAILVKSTE-----DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIV 86
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASV----QPLAWNIRLKIAIGAARGLAF 201
+ E+ L +V ++ + G L + + + Q L W +++ LA
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQI--------CLAL 138
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEY 261
H D+++++RD K+ NI L T ++ DFG+A++ S + + +GT Y +PE
Sbjct: 139 KHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEI 196
Query: 262 VATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
KSD++ G VL E+ T A + NLV I
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAFEA---GSMKNLVLKI---------------- 237
Query: 322 RLQGQYP---YKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ G +P +Y + L + + P+ RPS+ ++E
Sbjct: 238 -ISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 111
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 112 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 165
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 209
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 210 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 16/201 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LGEG +G V+K E +G ++A+K++ ES +E E++ + + P++V
Sbjct: 37 LGEGSYGSVYKAIHKE-------TGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVV 87
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+ G +++ +L +V E+ GS+ + + R + L + I +GL +LH
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT---LTEDEIATILQSTLKGLEYLHFM 144
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATG 265
K I+RD KA NILL+ AK++DFG+A G V+GT + APE +
Sbjct: 145 RK--IHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEI 200
Query: 266 HLYVKSDVYGFGVVLVEILTG 286
+D++ G+ +E+ G
Sbjct: 201 GYNCVADIWSLGITAIEMAEG 221
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 111
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 112 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TX 165
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 209
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 210 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 116
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 117 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TD 170
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 214
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 215 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 75
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 76 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 128
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 129 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 182
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 183 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 226
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 227 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 57
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 58 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 110
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 111 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 164
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 208
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 209 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 112
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 113 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TD 166
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 210
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 211 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 114
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 115 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 168
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 212
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 213 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 111
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 112 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TD 165
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 209
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 210 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 116
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 117 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 170
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 214
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 215 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 13/206 (6%)
Query: 82 SDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSH 141
+D LG G FG V +G + K I V K +E EE E + +L +
Sbjct: 14 ADIELGCGNFGSVRQGVYRMR---KKQIDVAIKVLKQGTEKADT-EEMMREAQIMHQLDN 69
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
P +VRL+G C + + L+LV E G L L G+ + P++ N+ ++ + G+ +
Sbjct: 70 PYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI-PVS-NV-AELLHQVSMGMKY 125
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAP 259
L +K ++RD A N+LL + AKISDFGL+K A S+ T R G + + AP
Sbjct: 126 LE--EKNFVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAP 182
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILT 285
E + +SDV+ +GV + E L+
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 62
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 115
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 116 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 169
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 213
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 214 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 111
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 112 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TD 165
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 209
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 210 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA-------REKNSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 111
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ ++ +
Sbjct: 112 TYITELANALSYCHS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC-- 167
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
GT Y PE + K D++ GV+ E L G + N + +
Sbjct: 168 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRI------- 218
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+R++ +P L + L+ P RP +REV+E
Sbjct: 219 -----------SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 112
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 113 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR----TT 166
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 167 LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 210
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 211 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 114
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 115 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 168
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 212
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 213 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 82 SDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSH 141
+D LG G FG V +G + K I V K +E EE E + +L +
Sbjct: 340 ADIELGCGNFGSVRQGVYRMR---KKQIDVAIKVLKQGTEKADT-EEMMREAQIMHQLDN 395
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
P +VRL+G C + + L+LV E G L L G+ + P++ N+ ++ + G+ +
Sbjct: 396 PYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI-PVS-NV-AELLHQVSMGMKY 451
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTY--GYAA 258
L +K ++R+ A N+LL + AKISDFGL+K LG A S+ T R G + + A
Sbjct: 452 LE--EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYA 507
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILT 285
PE + +SDV+ +GV + E L+
Sbjct: 508 PECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 105/215 (48%), Gaps = 14/215 (6%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS-- 131
+A F+ VLG+G FGKVF L +K G S + + A+K L +L+ + ++
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF---LVKKISG-SDARQLYAMKVLKKATLKVRDRVRTKM 75
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E + L ++HP +V+L + +L L+ +F++ G L L V +++ +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYL 132
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
A A LA H +IYRD K NILLD K++DFGL+K S
Sbjct: 133 AELA---LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFC 187
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE V +D + FGV++ E+LTG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 129/295 (43%), Gaps = 37/295 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL---QGFEEWQSEVNFLGRLSHP 142
LG+G FG V +G D AP SG +AVK L + L + +++ EVN + L H
Sbjct: 20 LGDGSFGVVRRGEWD--AP--SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
NL+RL G + +V E GSL + L R L + + A+ A G+ +L
Sbjct: 76 NLIRLYGVVLT-PPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLS-RYAVQVAEGMGYL 131
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEY 261
+ K+ I+RD A N+LL KI DFGL + P +V + + APE
Sbjct: 132 ES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 262 VATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLS-EKRKFRHIID 320
+ T SD + FGV L E+ T GQ +P++ + H ID
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFT----------YGQ-------EPWIGLNGSQILHKID 232
Query: 321 ARLQGQ---YPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+G+ P I + ++C +P+ RP+ + + L Q +D + Q
Sbjct: 233 K--EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRALQ 285
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 84
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 137
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + +
Sbjct: 138 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC-- 193
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
GT Y PE + K D++ GV+ E L G + N
Sbjct: 194 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 235
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 236 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 105/215 (48%), Gaps = 14/215 (6%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS-- 131
+A F+ VLG+G FGKVF L +K G S + + A+K L +L+ + ++
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF---LVKKISG-SDARQLYAMKVLKKATLKVRDRVRTKM 75
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E + L ++HP +V+L + +L L+ +F++ G L L V +++ +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYL 132
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
A A LA H +IYRD K NILLD K++DFGL+K S
Sbjct: 133 AELA---LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFC 187
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE V +D + FGV++ E+LTG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 129/301 (42%), Gaps = 44/301 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS-ESLQGFEEWQSEVNFLG 137
+ K V+GEG FG+V K + K G A+K++ S ++ E+ L
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIK-----KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 77
Query: 138 RLSH-PNLVRLLGYCWEDKELLLVYEFMQKGSLENHL-----------FG-RGASVQPLA 184
+L H PN++ LLG C L L E+ G+L + L F ++ L+
Sbjct: 78 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 137
Query: 185 WNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQS 244
L A ARG+ +L S KQ I+R+ A NIL+ +Y AKI+DFGL++ Q
Sbjct: 138 SQQLLHFAADVARGMDYL--SQKQFIHRNLAARNILVGENYVAKIADFGLSR-----GQE 190
Query: 245 HVTTRVMGT--YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLV 302
+ MG + A E + SDV+ +GV+L EI++ G
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS----------LGGTPYC 240
Query: 303 DWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLER 362
L EK + + + P ++ L +C +P RPS +++ +L R
Sbjct: 241 GMTCAELYEK------LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 294
Query: 363 L 363
+
Sbjct: 295 M 295
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ +G + L Q L+ + A
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-------QKLSKFDEQRTA 116
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + +
Sbjct: 117 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX-- 172
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
GT Y PE + K D++ GV+ E L G + N
Sbjct: 173 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 214
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 215 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 105/215 (48%), Gaps = 14/215 (6%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS-- 131
+A F+ VLG+G FGKVF L +K G S + + A+K L +L+ + ++
Sbjct: 21 KADPSQFELLKVLGQGSFGKVF---LVKKISG-SDARQLYAMKVLKKATLKVRDRVRTKM 76
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E + L ++HP +V+L + +L L+ +F++ G L L V +++ +
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYL 133
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
A A LA H +IYRD K NILLD K++DFGL+K S
Sbjct: 134 AELA---LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFC 188
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE V +D + FGV++ E+LTG
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 126/301 (41%), Gaps = 38/301 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSHP-N 143
LG G FG+V + D K+ + +AVK L + SE+ L + H N
Sbjct: 36 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 93
Query: 144 LVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQP-----------LAWNIRLKI 191
+V LLG C + L+++ EF + G+L +L + P L +
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICY 153
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 154 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE 311
+ APE + ++SDV+ FGV+L EI + L A PY
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGA----------------SPYPGV 254
Query: 312 K--RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL-ERLQASDQ 368
K +F + + + P ++ Q L C EP RP+ E+VE L LQA+ Q
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 314
Query: 369 K 369
+
Sbjct: 315 Q 315
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE---EWQSEVNFLGRLSHP 142
LG G FGKV K +G +AVK LN + ++ + + + E+ L HP
Sbjct: 24 LGVGTFGKV-------KVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
++++L ++ +V E++ G L +++ G + + + +I G+ +
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQIL----SGVDYC 132
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H V++RD K N+LLD AKI+DFGL+ + S G+ YAAPE V
Sbjct: 133 HRH--MVVHRDLKPENVLLDAHMNAKIADFGLSNM---MSDGEFLRXSCGSPNYAAPE-V 186
Query: 263 ATGHLYV--KSDVYGFGVVLVEILTGLRALDTN 293
+G LY + D++ GV+L +L G D +
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 56
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ S++ F +++ + +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLF 113
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 114 QLLQGLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 16/216 (7%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ-SEV 133
+++ FK LG G + V+KG +G +A+K++ +S +G E+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGL-------NKTTGVYVALKEVKLDSEEGTPSTAIREI 54
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP--LAWNIRLKI 191
+ + L H N+VRL + +L LV+EFM L+ ++ R P L N+
Sbjct: 55 SLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYF 113
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+GLAF H + ++++RD K N+L++ K+ DFGLA+ + + V
Sbjct: 114 QWQLLQGLAFCH--ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV- 170
Query: 252 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
T Y AP+ + Y S D++ G +L E++TG
Sbjct: 171 -TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG 205
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 54
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ S++ F +++ + +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLF 111
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 112 QLLQGLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 167
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 111
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ ++ +
Sbjct: 112 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC-- 167
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
GT Y PE + K D++ GV+ E L G + N
Sbjct: 168 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 209
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 210 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 33/281 (11%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--SEVNFLGRLSHP 142
+G G +G+ K + K+ GK ++ K+L+ S+ E+ SEVN L L HP
Sbjct: 13 TIGTGSYGRCQK--IRRKSDGK-----ILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 143 NLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
N+VR + + L +V E+ + G L + + Q L L++ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 201 FLHTSDK---QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
H V++RD K +N+ LDG K+ DFGLA++ + S T V GT Y
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI-LNHDTSFAKTFV-GTPYYM 183
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRH 317
+PE + KSD++ G +L E+ + Q L I+ + KFR
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA---FSQKELAGKIR-----EGKFRR 235
Query: 318 IIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
I PY+ + ++ ++ + L + HRPS+ E++E
Sbjct: 236 I---------PYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 114
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + +
Sbjct: 115 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC-- 170
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
GT Y PE + K D++ GV+ E L G + N
Sbjct: 171 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 212
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 213 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 126/300 (42%), Gaps = 37/300 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSHP-N 143
LG G FG+V + D K+ + +AVK L + SE+ L + H N
Sbjct: 37 LGRGAFGQVIEA--DAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 144 LVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQP----------LAWNIRLKIA 192
+V LLG C + L+++ EF + G+L +L + P L + +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 193 IGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMG 252
A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 155 FQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 253 TYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ APE + ++SDV+ FGV+L EI + L A PY K
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGA----------------SPYPGVK 255
Query: 313 --RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL-ERLQASDQK 369
+F + + + P ++ Q L C EP RP+ E+VE L LQA+ Q+
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFL 136
NF+ +GEG +G V+K +G V+A+KK L++E+ E++ L
Sbjct: 8 NFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 60
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
L+HPN+V+LL + +L LV+EF+ + + F +++ + +
Sbjct: 61 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQLL 117
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ T + T Y
Sbjct: 118 QGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 173
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
APE + Y + D++ G + E++T
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 128/292 (43%), Gaps = 37/292 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL---QGFEEWQSEVNFLGRLSHP 142
LG+G FG V +G D AP SG +AVK L + L + +++ EVN + L H
Sbjct: 26 LGDGSFGVVRRGEWD--AP--SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
NL+RL G + +V E GSL + L R L + + A+ A G+ +L
Sbjct: 82 NLIRLYGVVLT-PPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLS-RYAVQVAEGMGYL 137
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEY 261
+ K+ I+RD A N+LL KI DFGL + P +V + + APE
Sbjct: 138 ES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195
Query: 262 VATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLS-EKRKFRHIID 320
+ T SD + FGV L E+ T GQ +P++ + H ID
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFT----------YGQ-------EPWIGLNGSQILHKID 238
Query: 321 ARLQGQ---YPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQK 369
+G+ P I + ++C +P+ RP+ + + L Q +D +
Sbjct: 239 K--EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMR 288
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 56
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ S++ F +++ + +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLF 113
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 114 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 123/282 (43%), Gaps = 33/282 (11%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--SEVNFLGRLSHP 142
+G G +G+ K + K+ GK ++ K+L+ S+ E+ SEVN L L HP
Sbjct: 13 TIGTGSYGRCQK--IRRKSDGK-----ILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 143 NLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
N+VR + + L +V E+ + G L + + Q L L++ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 201 FLHTSDK---QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
H V++RD K +N+ LDG K+ DFGLA++ + +GT Y
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPYYM 183
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRH 317
+PE + KSD++ G +L E+ + Q L I+ + KFR
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA---FSQKELAGKIR-----EGKFRR 235
Query: 318 IIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVET 359
I PY+ + ++ ++ + L + HRPS+ E++E
Sbjct: 236 I---------PYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--SEVNFLGRLSHP 142
+G G +G+ K + K+ GK ++ K+L+ S+ E+ SEVN L L HP
Sbjct: 13 TIGTGSYGRCQK--IRRKSDGK-----ILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 143 NLVRLLGYCWE--DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
N+VR + + L +V E+ + G L + + Q L L++ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 201 FLHTSDK---QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
H V++RD K +N+ LDG K+ DFGLA++ +GT Y
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDEDFAKEFVGTPYYM 183
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRH 317
+PE + KSD++ G +L E+ + Q L I+ + KFR
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA---FSQKELAGKIR-----EGKFRR 235
Query: 318 IIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVET 359
I PY+ + ++ ++ + L + HRPS+ E++E
Sbjct: 236 I---------PYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 55
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ S++ F +++ + +
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLF 112
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 113 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 168
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 113
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + +
Sbjct: 114 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC-- 169
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
GT Y PE + K D++ GV+ E L G + N
Sbjct: 170 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 211
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 212 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 112
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + +
Sbjct: 113 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC-- 168
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
GT Y PE + K D++ GV+ E L G + N
Sbjct: 169 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 210
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 211 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 114
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ ++ +
Sbjct: 115 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC-- 170
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
GT Y PE + K D++ GV+ E L G + N
Sbjct: 171 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 212
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 213 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 111
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + +
Sbjct: 112 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC-- 167
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
GT Y PE + K D++ GV+ E L G + N
Sbjct: 168 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 209
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 210 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 126/302 (41%), Gaps = 39/302 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSHP-N 143
LG G FG+V + D K+ + +AVK L + SE+ L + H N
Sbjct: 35 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 144 LVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQP------------LAWNIRLK 190
+V LLG C + L+++ EF + G+L +L + P L +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+ A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 153 YSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLS 310
+ APE + ++SDV+ FGV+L EI + L A PY
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGA----------------SPYPG 253
Query: 311 EK--RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL-ERLQASD 367
K +F + + + P ++ Q L C EP RP+ E+VE L LQA+
Sbjct: 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
Query: 368 QK 369
Q+
Sbjct: 314 QQ 315
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 113
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI++FG + PS+ + T
Sbjct: 114 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TT 167
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 211
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 212 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 110/216 (50%), Gaps = 16/216 (7%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS-- 131
+A +F+ VLG+G FGKVF L K + SG + A+K L +L+ + ++
Sbjct: 24 KADPSHFELLKVLGQGSFGKVF---LVRKVT-RPDSGHLYAMKVLKKATLKVRDRVRTKM 79
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E + L ++HP +V+L + +L L+ +F++ G L L V +++ +
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYL 136
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
A A GL LH+ +IYRD K NILLD K++DFGL+K +
Sbjct: 137 A-ELALGLDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFC 191
Query: 252 GTYGYAAPEYVA-TGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE V GH + +D + +GV++ E+LTG
Sbjct: 192 GTVEYMAPEVVNRQGHSH-SADWWSYGVLMFEMLTG 226
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 114
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + +
Sbjct: 115 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC-- 170
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
GT Y PE + K D++ GV+ E L G + N
Sbjct: 171 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 212
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 213 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ ++ ++A+K L L+ G E + + E
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRK-------FILALKVLFKAQLEKAGVEHQLRRE 55
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 56 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 108
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T
Sbjct: 109 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 162
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 163 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 206
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 207 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSE 132
A +F+ LG+G FG V+ + S ++A+K L L+ G E + + E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA-------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
V L HPN++RL GY + + L+ E+ G++ L Q L+ + A
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTA 114
Query: 193 I---GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
A L++ H+ K+VI+RD K N+LL + KI++FG + PS+ + T
Sbjct: 115 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TT 168
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
+ GT Y PE + K D++ GV+ E L G + N
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------------- 212
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + ++ I +R++ +P L + L+ P RP +REV+E
Sbjct: 213 TYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFL 136
NF+ +GEG +G V+K +G V+A+KK L++E+ E++ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQLL 113
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ T + T Y
Sbjct: 114 QGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 169
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
APE + Y + D++ G + E++T
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 127/304 (41%), Gaps = 39/304 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSHP-N 143
LG G FG+V + D K+ + +AVK L + SE+ L + H N
Sbjct: 26 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 144 LVRLLGYCWE-DKELLLVYEFMQKGSLENHLFGRGASVQP------------LAWNIRLK 190
+V LLG C + L+++ EF + G+L +L + P L +
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+ A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 144 YSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLS 310
+ APE + ++SDV+ FGV+L EI + L A PY
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGA----------------SPYPG 244
Query: 311 EK--RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL-ERLQASD 367
K +F + + + P ++ Q L C EP RP+ E+VE L LQA+
Sbjct: 245 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
Query: 368 QKPK 371
Q+ +
Sbjct: 305 QQDR 308
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFL 136
NF+ +GEG +G V+K +G V+A+KK L++E+ E++ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQLL 112
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ T + T Y
Sbjct: 113 QGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 168
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
APE + Y + D++ G + E++T
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 54
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLF 111
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ T + T
Sbjct: 112 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 167
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFL 136
NF+ +GEG +G V+K +G V+A+KK L++E+ E++ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQLL 112
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ T + T Y
Sbjct: 113 QGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 168
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
APE + Y + D++ G + E++T
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 127/290 (43%), Gaps = 37/290 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL---QGFEEWQSEVNFLGRLSHP 142
LG+G FG V +G D AP SG +AVK L + L + +++ EVN + L H
Sbjct: 16 LGDGSFGVVRRGEWD--AP--SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
NL+RL G + +V E GSL + L R L + + A+ A G+ +L
Sbjct: 72 NLIRLYGVVLT-PPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLS-RYAVQVAEGMGYL 127
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEY 261
+ K+ I+RD A N+LL KI DFGL + P +V + + APE
Sbjct: 128 ES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 262 VATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLS-EKRKFRHIID 320
+ T SD + FGV L E+ T GQ +P++ + H ID
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT----------YGQ-------EPWIGLNGSQILHKID 228
Query: 321 ARLQGQ---YPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASD 367
+G+ P I + ++C +P+ RP+ + + L Q +D
Sbjct: 229 K--EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 276
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 53
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ + L++ + + PL +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLP--LIKSYLF 110
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 111 QLLQGLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL---QGFEEWQ 130
R +F VLG+G FGKV L E+ G+ + AVK L + + E
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKVM---LSER----KGTDELYAVKILKKDVVIQDDDVECTM 389
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKE-LLLVYEFMQKGSLENHLFGRGASVQPLAWNIRL 189
E L P + L C++ + L V E++ G L H+ G +P A
Sbjct: 390 VEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAA 449
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
+IAIG L FL + K +IYRD K N++LD KI+DFG+ K VTT+
Sbjct: 450 EIAIG----LFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTK 500
Query: 250 -VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE +A D + FGV+L E+L G
Sbjct: 501 XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 538
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFL 136
NF+ +GEG +G V+K +G V+A+KK L++E+ E++ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQLL 113
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ T + T Y
Sbjct: 114 QGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 169
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
APE + Y + D++ G + E++T
Sbjct: 170 RAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFL 136
NF+ +GEG +G V+K +G V+A+KK L++E+ E++ L
Sbjct: 11 NFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 63
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
L+HPN+V+LL + +L LV+EF+ + + F +++ + +
Sbjct: 64 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ T + T Y
Sbjct: 121 QGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 176
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
APE + Y + D++ G + E++T
Sbjct: 177 RAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFL 136
NF+ +GEG +G V+K +G V+A+KK L++E+ E++ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
L+HPN+V+LL + +L LV+EF+ + + F +++ + +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ T + T Y
Sbjct: 114 QGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 169
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
APE + Y + D++ G + E++T
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFL 136
NF+ +GEG +G V+K +G V+A+KK L++E+ E++ L
Sbjct: 11 NFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 63
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
L+HPN+V+LL + +L LV+EF+ + + F +++ + +
Sbjct: 64 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ T + T Y
Sbjct: 121 QGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 176
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
APE + Y + D++ G + E++T
Sbjct: 177 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 125/302 (41%), Gaps = 35/302 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSHP-N 143
LG G FG+V + D K+ + +AVK L + SE+ L + H N
Sbjct: 26 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 144 LVRLLGYCWE-DKELLLVYEFMQKGSLENHLFGRGASVQP------------LAWNIRLK 190
+V LLG C + L+++ EF + G+L +L + P L +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+ A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 144 YSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLS 310
+ APE + ++SDV+ FGV+L EI + L P +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------------LGASPYPGVK 246
Query: 311 EKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL-ERLQASDQK 369
+F + + + P ++ Q L C EP RP+ E+VE L LQA+ Q+
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
Query: 370 PK 371
+
Sbjct: 307 DR 308
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 56
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ + + F +++ + +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIKSYLF 113
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 114 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 149/354 (42%), Gaps = 54/354 (15%)
Query: 55 PNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVI 113
P+G+ LRI E FK VLG G FG V+KG W+ E K +
Sbjct: 3 PSGEAPNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPV 51
Query: 114 AVKKL-NSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENH 172
A+K+L + S + +E E + + +P++ RLLG C + L+ + M G L ++
Sbjct: 52 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDY 110
Query: 173 LFGRGASVQP---LAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKI 229
+ ++ L W +++ A+G+ +L D+++++RD A N+L+ KI
Sbjct: 111 VREHKDNIGSQYLLNWCVQI------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKI 162
Query: 230 SDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLR 288
+DFGLAKL + + + + A E + +SDV+ +GV + E++T G +
Sbjct: 163 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 222
Query: 289 ALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
D S + I++ + P + + +KC +
Sbjct: 223 PYDGIPAS-----------------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDAD 265
Query: 349 HRPSMREVVETLERLQASDQKPKQPRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
RP RE++ ++ Q+ QG + +H SP +N R
Sbjct: 266 SRPKFRELIIEFSKMARDPQR-----------YLVIQGDERMHLPSPTDSNFYR 308
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 126/291 (43%), Gaps = 35/291 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL---QGFEEWQSEVNFLGRLSHP 142
LG+G FG V +G D AP SG +AVK L + L + +++ EVN + L H
Sbjct: 26 LGDGSFGVVRRGEWD--AP--SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
NL+RL G + +V E GSL + L R L + + A+ A G+ +L
Sbjct: 82 NLIRLYGVVLT-PPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLS-RYAVQVAEGMGYL 137
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEY 261
+ K+ I+RD A N+LL KI DFGL + P V + + APE
Sbjct: 138 ES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 195
Query: 262 VATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
+ T SD + FGV L E+ T GQ WI S+ H ID
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFT----------YGQEP---WIGLNGSQ---ILHKIDK 239
Query: 322 RLQGQ---YPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQK 369
+G+ P I + ++C +P+ RP+ + + L Q +D +
Sbjct: 240 --EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMR 288
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 126/302 (41%), Gaps = 39/302 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH-PN 143
LG G FG+V + D K+ + +AVK L + SE+ L + H N
Sbjct: 35 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 144 LVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQP------------LAWNIRLK 190
+V LLG C + L+++ EF + G+L +L + P L +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+ A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 153 YSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLS 310
+ APE + ++SDV+ FGV+L EI + L A PY
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGA----------------SPYPG 253
Query: 311 EK--RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL-ERLQASD 367
K +F + + + P ++ Q L C EP RP+ E+VE L LQA+
Sbjct: 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
Query: 368 QK 369
Q+
Sbjct: 314 QQ 315
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 109/236 (46%), Gaps = 26/236 (11%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLG 137
+F+ + LG G G VFK SG V+A K ++ E + E+ L
Sbjct: 7 DFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
+ P +V G + D E+ + E M GSL+ L G + I K++I +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIK 115
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGY 256
GL +L K +++RD K SNIL++ K+ DFG++ +L S + S V TR Y
Sbjct: 116 GLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SY 169
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRAL-------DTNRPSGQHNLVDWI 305
+PE + H V+SD++ G+ LVE+ G + D+ P L+D+I
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYI 225
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 55
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLF 112
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 113 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 168
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 53
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLF 110
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 111 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL---QGFEEWQ 130
R +F VLG+G FGKV L E+ G+ + AVK L + + E
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKVM---LSER----KGTDELYAVKILKKDVVIQDDDVECTM 68
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKE-LLLVYEFMQKGSLENHLFGRGASVQPLAWNIRL 189
E L P + L C++ + L V E++ G L H+ G +P A
Sbjct: 69 VEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAA 128
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
+IAIG L FL + K +IYRD K N++LD KI+DFG+ K VTT+
Sbjct: 129 EIAIG----LFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTK 179
Query: 250 VM-GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE +A D + FGV+L E+L G
Sbjct: 180 XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 217
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 55
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLF 112
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 113 QLLQGLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 168
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 56
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLF 113
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 114 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 55
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLF 112
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 113 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 168
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 53
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLF 110
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 111 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 56
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ + + F +++ + +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLF 113
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 114 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 73
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 74 ASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 128
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 129 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 228
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 229 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 284
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 285 --------YLVIQGDERMHLPSPTDSNFYR 306
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 54
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLF 111
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 112 QLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 167
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 54
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLF 111
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 112 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 167
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 53
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLF 110
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 111 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 17/210 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFL 136
NF+ +GEG +G V+K +G V+A+KK L++E+ E++ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQLL 112
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T Y
Sbjct: 113 QGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 168
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
APE + Y + D++ G + E++T
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 72
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 73 ASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 127
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 128 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 227
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 228 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 283
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 284 --------YLVIQGDERMHLPSPTDSNFYR 305
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 126/302 (41%), Gaps = 39/302 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSHP-N 143
LG G FG+V + D K+ + +AVK L + SE+ L + H N
Sbjct: 35 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 144 LVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQP------------LAWNIRLK 190
+V LLG C + L+++ EF + G+L +L + P L +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+ A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 153 YSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLS 310
+ APE + ++SDV+ FGV+L EI + L A PY
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGA----------------SPYPG 253
Query: 311 EK--RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL-ERLQASD 367
K +F + + + P ++ Q L C EP RP+ E+VE L LQA+
Sbjct: 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
Query: 368 QK 369
Q+
Sbjct: 314 QQ 315
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 121/291 (41%), Gaps = 34/291 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSHP-N 143
LG G FG+V + D K+ + +AVK L + SE+ L + H N
Sbjct: 35 LGRGAFGQVIEA--DAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 144 LVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQP--------LAWNIRLKIAIG 194
+V LLG C + L+++ EF + G+L +L + P L + +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 153 VAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEK-- 312
+ APE + ++SDV+ FGV+L EI + L A PY K
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGA----------------SPYPGVKID 253
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+F + + + P ++ Q L C EP RP+ E+VE L L
Sbjct: 254 EEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 57
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ + + F +++ + +
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLF 114
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 115 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 170
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 17/210 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFL 136
NF+ +GEG +G V+K +G V+A+KK L++E+ E++ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQLL 112
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T Y
Sbjct: 113 QGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 168
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
APE + Y + D++ G + E++T
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 74
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 75 ASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 129
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 130 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 229
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 230 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 285
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 286 --------YLVIQGDERMHLPSPTDSNFYR 307
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 71
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 72 ASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 127 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 226
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 227 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 282
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 283 --------YLVIQGDERMHLPSPTDSNFYR 304
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K + LG+G FG V D P +G ++AVK+L ++Q E+ L
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYD---PLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 138 RLSHPNLVRLLGYCWED--KELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L +V+ G + EL LV E++ G L + L A L + L +
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQI 120
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV-MGTY 254
+G+ +L + ++ ++RD A NIL++ KI+DFGLAKL P V
Sbjct: 121 CKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPI 178
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE ++ +SDV+ FGVVL E+ T
Sbjct: 179 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 17/210 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFL 136
NF+ +GEG +G V+K +G V+A+KK L++E+ E++ L
Sbjct: 5 NFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
L+HPN+V+LL + +L LV+EF+ + + F +++ + +
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQLL 114
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T Y
Sbjct: 115 QGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
APE + Y + D++ G + E++T
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 126/302 (41%), Gaps = 39/302 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSHP-N 143
LG G FG+V + D K+ + +AVK L + SE+ L + H N
Sbjct: 37 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 144 LVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQP------------LAWNIRLK 190
+V LLG C + L+++ EF + G+L +L + P L +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+ A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 155 YSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLS 310
+ APE + ++SDV+ FGV+L EI + L A PY
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGA----------------SPYPG 255
Query: 311 EK--RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL-ERLQASD 367
K +F + + + P ++ Q L C EP RP+ E+VE L LQA+
Sbjct: 256 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 315
Query: 368 QK 369
Q+
Sbjct: 316 QQ 317
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 71
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 72 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 127 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 226
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 227 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 282
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 283 --------YLVIQGDERMHLPSPTDSNFYR 304
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFL 136
NF+ +GEG +G V+K +G V+A+KK L++E+ E++ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQLL 113
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+GL+F H+ +V++RD K N+L++ K++DFGLA+ +++ T + T Y
Sbjct: 114 QGLSFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 169
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
APE + Y + D++ G + E++T
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 71 VELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN----SESLQGF 126
+++++ + ++ LGEG F V+K + ++A+KK+ SE+ G
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKA-------RDKNTNQIVAIKKIKLGHRSEAKDGI 55
Query: 127 EEWQ-SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAW 185
E+ L LSHPN++ LL + LV++FM+ LE + + P
Sbjct: 56 NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHI 114
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSH 245
+ + + +GL +LH +++RD K +N+LLD + K++DFGLAK S ++++
Sbjct: 115 KAYMLMTL---QGLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY 169
Query: 246 VTTRVMGTYGYAAPEYVATGHLY-VKSDVYGFGVVLVEIL 284
V T Y APE + +Y V D++ G +L E+L
Sbjct: 170 XHQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 85 VLGE-GGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPN 143
++GE G FGKV+K + + A K ++++S + E++ E++ L HPN
Sbjct: 16 IIGELGDFGKVYKA-------QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 68
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V+LL + + L ++ EF G+++ + +PL + + L +LH
Sbjct: 69 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH 125
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR--VMGTYGYAAPEY 261
D ++I+RD KA NIL K++DFG++ +++ + R +GT + APE
Sbjct: 126 --DNKIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTXIQRRDSFIGTPYWMAPEV 180
Query: 262 VATGH-----LYVKSDVYGFGVVLVEI 283
V K+DV+ G+ L+E+
Sbjct: 181 VMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 96
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 97 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 151
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 152 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 207
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 251
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 252 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 307
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 308 --------YLVIQGDERMHLPSPTDSNFYR 329
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 73
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 74 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 128
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 129 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 228
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 229 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 284
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 285 --------YLVIQGDERMHLPSPTDSNFYR 306
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 127/304 (41%), Gaps = 39/304 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSHP-N 143
LG G FG+V + D K+ + +AVK L + SE+ L + H N
Sbjct: 26 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 144 LVRLLGYCWE-DKELLLVYEFMQKGSLENHLFGRGASVQP------------LAWNIRLK 190
+V LLG C + L+++ EF + G+L +L + P L +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+ A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 144 YSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLS 310
+ APE + ++SDV+ FGV+L EI + L A PY
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGA----------------SPYPG 244
Query: 311 EK--RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL-ERLQASD 367
K +F + + + P ++ Q L C EP RP+ E+VE L LQA+
Sbjct: 245 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
Query: 368 QKPK 371
Q+ +
Sbjct: 305 QQDR 308
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 53
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLF 110
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 111 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 77
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 78 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 132
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 133 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 188
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 232
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 233 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 288
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 289 --------YLVIQGDERMHLPSPTDSNFYR 310
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 72
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 73 ASVDNPHVCRLLGICLTST-VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI---- 127
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 128 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 227
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 228 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 283
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 284 --------YLVIQGDERMHLPSPTDSNFYR 305
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL----QGFEEWQSEVNFLGRLS 140
VLG+GG+GKVF+ K G + +G + A+K L + + ++E N L +
Sbjct: 24 VLGKGGYGKVFQV---RKVTG-ANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK 79
Query: 141 HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
HP +V L+ +L L+ E++ G L L G ++ A +I+ +A
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEIS------MA 133
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPE 260
H K +IYRD K NI+L+ K++DFGL K S VT GT Y APE
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAPE 191
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTG 286
+ D + G ++ ++LTG
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 74
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 75 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 129
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 130 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 229
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 230 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 285
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 286 --------YLVIQGDERMHLPSPTDSNFYR 307
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 78
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 79 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 133
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 134 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 233
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 234 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 289
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 290 --------YLVIQGDERMHLPSPTDSNFYR 311
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 125/302 (41%), Gaps = 35/302 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSHP-N 143
LG G FG+V + D K+ + +AVK L + SE+ L + H N
Sbjct: 26 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 144 LVRLLGYCWE-DKELLLVYEFMQKGSLENHLFGRGASVQP------------LAWNIRLK 190
+V LLG C + L+++ EF + G+L +L + P L +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+ A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 144 YSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLS 310
+ APE + ++SDV+ FGV+L EI + L P +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------------LGASPYPGVK 246
Query: 311 EKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL-ERLQASDQK 369
+F + + + P ++ Q L C EP RP+ E+VE L LQA+ Q+
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
Query: 370 PK 371
+
Sbjct: 307 DR 308
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL----QGFEEWQSEVNFLGRLS 140
VLG+GG+GKVF+ K G + +G + A+K L + + ++E N L +
Sbjct: 24 VLGKGGYGKVFQV---RKVTG-ANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK 79
Query: 141 HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
HP +V L+ +L L+ E++ G L L G ++ A +I+ +A
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEIS------MA 133
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPE 260
H K +IYRD K NI+L+ K++DFGL K S VT GT Y APE
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAPE 191
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTG 286
+ D + G ++ ++LTG
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 124/300 (41%), Gaps = 35/300 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSH-PN 143
LG G FG+V + D K+ + +AVK L + SE+ L + H N
Sbjct: 72 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 129
Query: 144 LVRLLGYCWE-DKELLLVYEFMQKGSLENHLFGRGASVQP------------LAWNIRLK 190
+V LLG C + L+++ EF + G+L +L + P L +
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
+ A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 190 YSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLS 310
+ APE + ++SDV+ FGV+L EI + L P +
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------------LGASPYPGVK 292
Query: 311 EKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL-ERLQASDQK 369
+F + + + P ++ Q L C EP RP+ E+VE L LQA+ Q+
Sbjct: 293 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 352
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 74
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 75 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 129
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 130 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 229
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 230 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 285
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 286 --------YLVIQGDERMHLPSPTDSNFYR 307
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL---QGFEEWQSEVNFLGRLSHP 142
LG+G FG V +G D AP SG +AVK L + L + +++ EVN + L H
Sbjct: 20 LGDGSFGVVRRGEWD--AP--SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
NL+RL G + +V E GSL + L R L + + A+ A G+ +L
Sbjct: 76 NLIRLYGVVLT-PPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLS-RYAVQVAEGMGYL 131
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEY 261
+ K+ I+RD A N+LL KI DFGL + P +V + + APE
Sbjct: 132 ES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 262 VATGHLYVKSDVYGFGVVLVEILT 285
+ T SD + FGV L E+ T
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 121/291 (41%), Gaps = 34/291 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG-FEEWQSEVNFLGRLSHP-N 143
LG G FG+V + D K+ + +AVK L + SE+ L + H N
Sbjct: 35 LGRGAFGQVIEA--DAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 144 LVRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQP--------LAWNIRLKIAIG 194
+V LLG C + L+++ EF + G+L +L + P L + +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 153 VAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEK-- 312
+ APE + ++SDV+ FGV+L EI + L A PY K
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGA----------------SPYPGVKID 253
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
+F + + + P ++ Q L C EP RP+ E+VE L L
Sbjct: 254 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL---QGFEEWQSEVNFLGRLSHP 142
LG+G FG V +G D AP SG +AVK L + L + +++ EVN + L H
Sbjct: 16 LGDGSFGVVRRGEWD--AP--SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
NL+RL G + +V E GSL + L R L + + A+ A G+ +L
Sbjct: 72 NLIRLYGVVLT-PPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLS-RYAVQVAEGMGYL 127
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEY 261
+ K+ I+RD A N+LL KI DFGL + P +V + + APE
Sbjct: 128 ES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 262 VATGHLYVKSDVYGFGVVLVEILT 285
+ T SD + FGV L E+ T
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 71
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 72 ASVDNPHVCRLLGICLTST-VQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 127 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 226
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 227 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 282
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 283 --------YLVIQGDERMHLPSPTDSNFYR 304
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 65
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 66 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 120
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 121 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 220
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 221 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 276
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 277 --------YLVIQGDERMHLPSPTDSNFYR 298
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFLGRLSHPN 143
+GEG +G V+K K G ++A+K+ L++E E++ L L HPN
Sbjct: 29 VGEGTYGVVYKA--------KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI-GAARGLAFL 202
+V L+ ++ L LV+EFM+K L+ L +Q + ++KI + RG+A
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ----DSQIKIYLYQLLRGVA-- 133
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H ++++RD K N+L++ K++DFGLA+ +S+ T + T Y AP+ +
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVL 191
Query: 263 ATGHLYVKS-DVYGFGVVLVEILTG 286
Y S D++ G + E++TG
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 111/249 (44%), Gaps = 29/249 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS---EVNFLGRLSHP 142
+G G FG V+ + V+A+KK++ Q E+WQ EV FL +L HP
Sbjct: 62 IGHGSFGAVYFA-------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 114
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N ++ G + LV E+ GS + L +PL + GA +GLA+L
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCL-GSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYL 170
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H+ + +I+RD KA NILL K+ DFG SAS +GT + APE +
Sbjct: 171 HSHN--MIHRDVKAGNILLSEPGLVKLGDFG------SASIMAPANXFVGTPYWMAPEVI 222
Query: 263 AT---GHLYVKSDVYGFGVVLVEILTGLRAL-DTNRPSGQHNLVDWIKPYLSE---KRKF 315
G K DV+ G+ +E+ L + N S +++ P L F
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYF 282
Query: 316 RHIIDARLQ 324
R+ +D+ LQ
Sbjct: 283 RNFVDSCLQ 291
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K + LG+G FG V D P +G ++AVK+L ++Q E+ L
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYD---PLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 138 RLSHPNLVRLLGYCWED--KELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L +V+ G + + L LV E++ G L + L A L + L +
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQI 124
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV-MGTY 254
+G+ +L + ++ ++RD A NIL++ KI+DFGLAKL P +V
Sbjct: 125 CKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 182
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE ++ +SDV+ FGVVL E+ T
Sbjct: 183 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K + LG+G FG V D P +G ++AVK+L ++Q E+ L
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYD---PLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 66
Query: 138 RLSHPNLVRLLGYCWED--KELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L +V+ G + + L LV E++ G L + L A L + L +
Sbjct: 67 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQI 123
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV-MGTY 254
+G+ +L + ++ ++RD A NIL++ KI+DFGLAKL P +V
Sbjct: 124 CKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 181
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE ++ +SDV+ FGVVL E+ T
Sbjct: 182 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFLGRLSHPN 143
+GEG +G V+K K G ++A+K+ L++E E++ L L HPN
Sbjct: 29 VGEGTYGVVYKA--------KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI-GAARGLAFL 202
+V L+ ++ L LV+EFM+K L+ L +Q + ++KI + RG+A
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ----DSQIKIYLYQLLRGVA-- 133
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H ++++RD K N+L++ K++DFGLA+ +S+ T + T Y AP+ +
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVL 191
Query: 263 ATGHLYVKS-DVYGFGVVLVEILTG 286
Y S D++ G + E++TG
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 17/210 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFL 136
NF+ +GEG +G V+K +G V+A+ K L++E+ E++ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALXKIRLDTETEGVPSTAIREISLL 56
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQLL 113
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ T + T Y
Sbjct: 114 QGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 169
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
APE + Y + D++ G + E++T
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 17/210 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFL 136
NF+ +GEG +G V+K +G V+A+ K L++E+ E++ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALXKIRLDTETEGVPSTAIREISLL 55
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
L+HPN+V+LL + +L LV+EF+ + L+ + + PL +
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP--LIKSYLFQLL 112
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ T + T Y
Sbjct: 113 QGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 168
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
APE + Y + D++ G + E++T
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 111/249 (44%), Gaps = 29/249 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS---EVNFLGRLSHP 142
+G G FG V+ + V+A+KK++ Q E+WQ EV FL +L HP
Sbjct: 23 IGHGSFGAVYFA-------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 75
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N ++ G + LV E+ GS + L +PL + GA +GLA+L
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYCL-GSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYL 131
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H+ + +I+RD KA NILL K+ DFG SAS +GT + APE +
Sbjct: 132 HSHN--MIHRDVKAGNILLSEPGLVKLGDFG------SASIMAPANXFVGTPYWMAPEVI 183
Query: 263 AT---GHLYVKSDVYGFGVVLVEILTGLRAL-DTNRPSGQHNLVDWIKPYLSE---KRKF 315
G K DV+ G+ +E+ L + N S +++ P L F
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYF 243
Query: 316 RHIIDARLQ 324
R+ +D+ LQ
Sbjct: 244 RNFVDSCLQ 252
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 19/210 (9%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLG 137
+F+ + LG G G VFK + K SG V+A K ++ E + E+ L
Sbjct: 69 DFEKISELGAGNGGVVFK--VSHKP-----SGLVMARKLIHLEIKPAIRNQIIRELQVLH 121
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
+ P +V G + D E+ + E M GSL+ L G + I K++I +
Sbjct: 122 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIK 177
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGY 256
GL +L K +++RD K SNIL++ K+ DFG++ +L S + S V GT Y
Sbjct: 178 GLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----GTRSY 231
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
+PE + H V+SD++ G+ LVE+ G
Sbjct: 232 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E+ L + P +V G + D E+ + E M GSL+ L + + I K+
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KEAKRIPEEILGKV 119
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRV 250
+I RGLA+L Q+++RD K SNIL++ K+ DFG++ +L S + S V
Sbjct: 120 SIAVLRGLAYLREK-HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---- 174
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE + H V+SD++ G+ LVE+ G
Sbjct: 175 -GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 11/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R+ K + LG+G FG V D P +G ++AVK+L ++Q E+ L
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYD---PLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 79
Query: 138 RLSHPNLVRLLGYCWED--KELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L +V+ G + + L LV E++ G L + L A L + L +
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQI 136
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV-MGTY 254
+G+ +L + ++ ++RD A NIL++ KI+DFGLAKL P +V
Sbjct: 137 CKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 194
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ APE ++ +SDV+ FGVVL E+ T
Sbjct: 195 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL---QGFEEWQSEVNFLGRLSHP 142
LG+G FG V +G D AP SG +AVK L + L + +++ EVN + L H
Sbjct: 16 LGDGSFGVVRRGEWD--AP--SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
NL+RL G + +V E GSL + L R L + + A+ A G+ +L
Sbjct: 72 NLIRLYGVVLT-PPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLS-RYAVQVAEGMGYL 127
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT-YGYAAPEY 261
+ K+ I+RD A N+LL KI DFGL + P V + + APE
Sbjct: 128 ES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 185
Query: 262 VATGHLYVKSDVYGFGVVLVEILT 285
+ T SD + FGV L E+ T
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 140/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 68
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 69 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 123
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 124 --AEGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 223
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 224 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 279
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 280 --------YLVIQGDERMHLPSPTDSNFYR 301
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 147/353 (41%), Gaps = 52/353 (14%)
Query: 55 PNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVI 113
P+G+ LRI E FK VLG G FG V+KG W+ E G+ V
Sbjct: 33 PSGEAPNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPE---GEKVKIPVA 82
Query: 114 AVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHL 173
++ + S + +E E + + +P++ RLLG C + L+ + M G L +++
Sbjct: 83 IMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV 141
Query: 174 FGRGASVQP---LAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKIS 230
++ L W +++ A+G+ +L D+++++RD A N+L+ KI+
Sbjct: 142 REHKDNIGSQYLLNWCVQI------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKIT 193
Query: 231 DFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRA 289
DFGLAKL + + + + A E + +SDV+ +GV + E++T G +
Sbjct: 194 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
Query: 290 LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKH 349
D S + I++ + P + + +KC +
Sbjct: 254 YDGIPAS-----------------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADS 296
Query: 350 RPSMREVVETLERLQASDQKPKQPRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
RP RE++ ++ Q+ QG + +H SP +N R
Sbjct: 297 RPKFRELIIEFSKMARDPQR-----------YLVIQGDERMHLPSPTDSNFYR 338
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 123/281 (43%), Gaps = 46/281 (16%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE---EWQSEVNFLGRLSHP 142
LG G FGKV K +G +AVK LN + ++ + + + E+ L HP
Sbjct: 19 LGVGTFGKV-------KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
++++L + +V E++ G L +++ G + A RL I +A
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR--RLFQQILSAVDYCHR 129
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H V++RD K N+LLD AKI+DFGL+ + S G+ YAAPE V
Sbjct: 130 H----MVVHRDLKPENVLLDAHMNAKIADFGLSNM---MSDGEFLRDSCGSPNYAAPE-V 181
Query: 263 ATGHLYV--KSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIID 320
+G LY + D++ GV+L +L G D D P L +K
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFD-----------DEHVPTLFKK-------- 222
Query: 321 ARLQGQYPYKAAY---QIAQLSLKCLEAEPKHRPSMREVVE 358
++G Y Y +A L + L+ +P R +++++ E
Sbjct: 223 --IRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 123/281 (43%), Gaps = 46/281 (16%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE---EWQSEVNFLGRLSHP 142
LG G FGKV K +G +AVK LN + ++ + + + E+ L HP
Sbjct: 19 LGVGTFGKV-------KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
++++L + +V E++ G L +++ G + A RL I +A
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR--RLFQQILSAVDYCHR 129
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H V++RD K N+LLD AKI+DFGL+ + S G+ YAAPE V
Sbjct: 130 H----MVVHRDLKPENVLLDAHMNAKIADFGLSNM---MSDGEFLRTSCGSPNYAAPE-V 181
Query: 263 ATGHLYV--KSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIID 320
+G LY + D++ GV+L +L G D D P L +K
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFD-----------DEHVPTLFKK-------- 222
Query: 321 ARLQGQYPYKAAY---QIAQLSLKCLEAEPKHRPSMREVVE 358
++G Y Y +A L + L+ +P R +++++ E
Sbjct: 223 --IRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 105/229 (45%), Gaps = 42/229 (18%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSE--VNFLGRLSHP 142
V G FG V+K L +AVK +Q + WQ+E V L + H
Sbjct: 31 VKARGRFGCVWKAQL---------LNEYVAVKIF---PIQDKQSWQNEYEVYSLPGMKHE 78
Query: 143 NLVRLLGY----CWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
N+++ +G D +L L+ F +KGSL + L ++WN IA ARG
Sbjct: 79 NILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARG 133
Query: 199 LAFLHTS--------DKQVIYRDFKASNILLDGSYTAKISDFGLA---KLGPSASQSHVT 247
LA+LH + +RD K+ N+LL + TA I+DFGLA + G SA +H
Sbjct: 134 LAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ 193
Query: 248 TRVMGTYGYAAPEYVATG-----HLYVKSDVYGFGVVLVEILTGLRALD 291
+GT Y APE + +++ D+Y G+VL E+ + A D
Sbjct: 194 ---VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 123/298 (41%), Gaps = 36/298 (12%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQG--FEEWQSEVNF 135
+ F +LG+G FG V + L ++ GS +AVK L ++ + EE+ E
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQE----DGSFVKVAVKMLKADIIASSDIEEFLREAAC 78
Query: 136 LGRLSHPNLVRLLGYCWEDKEL------LLVYEFMQKGSLENHLFGRGASVQP--LAWNI 187
+ HP++ +L+G + +++ FM+ G L L P L
Sbjct: 79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQT 138
Query: 188 RLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVT 247
++ + A G+ +L S + I+RD A N +L T ++DFGL++ S
Sbjct: 139 LVRFMVDIACGMEYL--SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQG 196
Query: 248 TRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
+ A E +A V SDV+ FGV + EI+T GQ P
Sbjct: 197 CASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT----------RGQ-------TP 239
Query: 308 Y--LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
Y + + ++I Q P + ++ L +C A+PK RPS + LE +
Sbjct: 240 YAGIENAEIYNYLIGGNRLKQ-PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 17/215 (7%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N++ +G+G F KV G+ + +I +LN SLQ + EV +
Sbjct: 16 NYRLQKTIGKGNFAKV--KLARHVLTGREVAVKIIDKTQLNPTSLQ---KLFREVRIMKI 70
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L+HPN+V+L +K L LV E+ G + ++L G + A + + + A +
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQIVSAVQ- 128
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+ K +++RD KA N+LLDG KI+DFG + + + G+ YAA
Sbjct: 129 ----YCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSN---EFTVGNKLDTFCGSPPYAA 181
Query: 259 PEYVATGHLYV--KSDVYGFGVVLVEILTGLRALD 291
PE + G Y + DV+ GV+L +++G D
Sbjct: 182 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 13/206 (6%)
Query: 82 SDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSH 141
D LG G FG V KG+ K K+ + ++ + N +L+ +E +E N + +L +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDN 87
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
P +VR++G C E + +LV E + G L +L + V+ NI +++ + G+ +
Sbjct: 88 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDK--NI-IELVHQVSMGMKY 142
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAP 259
L S+ ++RD A N+LL + AKISDFGL+K A +++ + G + + AP
Sbjct: 143 LEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 199
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILT 285
E + KSDV+ FGV++ E +
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 13/206 (6%)
Query: 82 SDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSH 141
D LG G FG V KG+ K K+ + ++ + N +L+ +E +E N + +L +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDN 87
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
P +VR++G C E + +LV E + G L +L + V+ NI +++ + G+ +
Sbjct: 88 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDK--NI-IELVHQVSMGMKY 142
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAP 259
L S+ ++RD A N+LL + AKISDFGL+K A +++ + G + + AP
Sbjct: 143 LEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 199
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILT 285
E + KSDV+ FGV++ E +
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 140/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 74
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 75 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 129
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 130 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 229
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + KC + RP RE++ ++ Q+
Sbjct: 230 -EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQR--- 285
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 286 --------YLVIQGDERMHLPSPTDSNFYR 307
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 13/205 (6%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHP 142
D LG G FG V KG+ K K+ + ++ + N +L+ +E +E N + +L +P
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDNP 431
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
+VR++G C E + +LV E + G L +L + V+ NI +++ + G+ +L
Sbjct: 432 YIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDK--NI-IELVHQVSMGMKYL 486
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPE 260
S+ ++RD A N+LL + AKISDFGL+K A +++ + G + + APE
Sbjct: 487 EESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPE 543
Query: 261 YVATGHLYVKSDVYGFGVVLVEILT 285
+ KSDV+ FGV++ E +
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 105/210 (50%), Gaps = 17/210 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFL 136
NF+ +GEG +G V+K +G V+A+KK L++E+ E++ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
L+HPN+V+LL + +L LV+E + + + F +++ + +
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIKSYLFQLL 112
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ T + T Y
Sbjct: 113 QGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 168
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
APE + Y + D++ G + E++T
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 13/206 (6%)
Query: 82 SDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSH 141
D LG G FG V KG+ K K+ + ++ + N +L+ +E +E N + +L +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDN 85
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
P +VR++G C E + +LV E + G L +L + V+ NI +++ + G+ +
Sbjct: 86 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDK--NI-IELVHQVSMGMKY 140
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAP 259
L S+ ++RD A N+LL + AKISDFGL+K A +++ + G + + AP
Sbjct: 141 LEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 197
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILT 285
E + KSDV+ FGV++ E +
Sbjct: 198 ECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 140/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 81
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 82 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 136
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 137 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 236
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + KC + RP RE++ ++ Q+
Sbjct: 237 -EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQR--- 292
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 293 --------YLVIQGDERMHLPSPTDSNFYR 314
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLG 137
+F+ + LG G G VFK SG V+A K ++ E + E+ L
Sbjct: 34 DFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 86
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
+ P +V G + D E+ + E M GSL+ L G + I K++I +
Sbjct: 87 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIK 142
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGY 256
GL +L K +++RD K SNIL++ K+ DFG++ +L S + S V TR Y
Sbjct: 143 GLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SY 196
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
+PE + H V+SD++ G+ LVE+ G
Sbjct: 197 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLG 137
+F+ + LG G G VFK SG V+A K ++ E + E+ L
Sbjct: 7 DFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
+ P +V G + D E+ + E M GSL+ L G + I K++I +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIK 115
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGY 256
GL +L K +++RD K SNIL++ K+ DFG++ +L S + S V TR Y
Sbjct: 116 GLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SY 169
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
+PE + H V+SD++ G+ LVE+ G
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLG 137
+F+ + LG G G VFK SG V+A K ++ E + E+ L
Sbjct: 7 DFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
+ P +V G + D E+ + E M GSL+ L G + I K++I +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIK 115
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGY 256
GL +L K +++RD K SNIL++ K+ DFG++ +L S + S V TR Y
Sbjct: 116 GLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SY 169
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
+PE + H V+SD++ G+ LVE+ G
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 13/205 (6%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHP 142
D LG G FG V KG+ K K+ + ++ + N +L+ +E +E N + +L +P
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDNP 430
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
+VR++G C E + +LV E + G L +L + V+ NI +++ + G+ +L
Sbjct: 431 YIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDK--NI-IELVHQVSMGMKYL 485
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPE 260
S+ ++RD A N+LL + AKISDFGL+K A +++ + G + + APE
Sbjct: 486 EESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPE 542
Query: 261 YVATGHLYVKSDVYGFGVVLVEILT 285
+ KSDV+ FGV++ E +
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 39/284 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N++ +G+G F KV GK + +I +LNS SLQ + EV +
Sbjct: 15 NYRLLKTIGKGNFAKV--KLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKV 69
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L+HPN+V+L +K L LV E+ G + ++L G + A + + + A +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQIVSAVQ- 127
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+ K +++RD KA N+LLD KI+DFG + + + G+ YAA
Sbjct: 128 ----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDEFCGSPPYAA 180
Query: 259 PEYVATGHLY--VKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
PE + G Y + DV+ GV+L +++G D GQ+ +
Sbjct: 181 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQN---------------LK 219
Query: 317 HIIDARLQGQY--PYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + L+G+Y P+ + L K L P R ++ ++++
Sbjct: 220 ELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VL G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 78
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 79 ASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 133
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 134 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 233
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 234 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 289
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 290 --------YLVIQGDERMHLPSPTDSNFYR 311
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 92/217 (42%), Gaps = 19/217 (8%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R NF+ VLG+G FGKV + E +G + AVK L + + ++ + +
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKE-------TGDLYAVKVLKKDVILQDDDVECTM 71
Query: 134 NFLGRLS----HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRL 189
LS HP L +L L V EF+ G L H+ + A
Sbjct: 72 TEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAA 131
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
+I L FLH DK +IYRD K N+LLD K++DFG+ K G T
Sbjct: 132 EII----SALMFLH--DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG--ICNGVTTAT 183
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE + D + GV+L E+L G
Sbjct: 184 FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 39/284 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N++ +G+G F KV GK + +I +LNS SLQ + EV +
Sbjct: 15 NYRLLKTIGKGNFAKV--KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKV 69
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L+HPN+V+L +K L LV E+ G + ++L G + A + + + A +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQIVSAVQ- 127
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+ K +++RD KA N+LLD KI+DFG + + + G+ YAA
Sbjct: 128 ----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDTFCGSPPYAA 180
Query: 259 PEYVATGHLY--VKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
PE + G Y + DV+ GV+L +++G D GQ+ +
Sbjct: 181 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQN---------------LK 219
Query: 317 HIIDARLQGQY--PYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + L+G+Y P+ + L K L P R ++ ++++
Sbjct: 220 ELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 73
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 74 ASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 128
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFG AKL + + +
Sbjct: 129 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 228
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 229 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 284
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 285 --------YLVIQGDERMHLPSPTDSNFYR 306
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 39/284 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N++ +G+G F KV GK + +I +LNS SLQ + EV +
Sbjct: 15 NYRLLKTIGKGNFAKV--KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKV 69
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L+HPN+V+L +K L LV E+ G + ++L G + A + + + A +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQIVSAVQ- 127
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+ K +++RD KA N+LLD KI+DFG + + + G+ YAA
Sbjct: 128 ----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDTFCGSPPYAA 180
Query: 259 PEYVATGHLY--VKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
PE + G Y + DV+ GV+L +++G D GQ+ +
Sbjct: 181 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQN---------------LK 219
Query: 317 HIIDARLQGQY--PYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + L+G+Y P+ + L K L P R ++ ++++
Sbjct: 220 ELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VL G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 71
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 72 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 127 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 226
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 227 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 282
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 283 --------YLVIQGDERMHLPSPTDSNFYR 304
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 75
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 76 ASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 130
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFG AKL + + +
Sbjct: 131 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 186
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 230
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 231 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 286
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 287 --------YLVIQGDERMHLPSPTDSNFYR 308
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 13/206 (6%)
Query: 82 SDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSH 141
D LG G FG V KG+ K K+ + ++ + N +L+ +E +E N + +L +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDN 71
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
P +VR++G C E + +LV E + G L +L + V+ NI +++ + G+ +
Sbjct: 72 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDK--NI-IELVHQVSMGMKY 126
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAP 259
L S+ ++RD A N+LL + AKISDFGL+K A +++ + G + + AP
Sbjct: 127 LEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 183
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILT 285
E + KSDV+ FGV++ E +
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 13/206 (6%)
Query: 82 SDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSH 141
D LG G FG V KG+ K K+ + ++ + N +L+ +E +E N + +L +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDN 77
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
P +VR++G C E + +LV E + G L +L + V+ NI +++ + G+ +
Sbjct: 78 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDK--NI-IELVHQVSMGMKY 132
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAP 259
L S+ ++RD A N+LL + AKISDFGL+K A +++ + G + + AP
Sbjct: 133 LEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 189
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILT 285
E + KSDV+ FGV++ E +
Sbjct: 190 ECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 13/206 (6%)
Query: 82 SDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSH 141
D LG G FG V KG+ K K+ + ++ + N +L+ +E +E N + +L +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDN 67
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
P +VR++G C E + +LV E + G L +L + V+ NI +++ + G+ +
Sbjct: 68 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDK--NI-IELVHQVSMGMKY 122
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAP 259
L S+ ++RD A N+LL + AKISDFGL+K A +++ + G + + AP
Sbjct: 123 LEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 179
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILT 285
E + KSDV+ FGV++ E +
Sbjct: 180 ECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 39/284 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N++ +G+G F KV GK + +I +LNS SLQ + EV +
Sbjct: 15 NYRLLKTIGKGNFAKV--KLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKV 69
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L+HPN+V+L +K L LV E+ G + ++L G + A + + + A +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQIVSAVQ- 127
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+ K +++RD KA N+LLD KI+DFG + + + G+ YAA
Sbjct: 128 ----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDTFCGSPPYAA 180
Query: 259 PEYVATGHLY--VKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
PE + G Y + DV+ GV+L +++G D GQ+ +
Sbjct: 181 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQN---------------LK 219
Query: 317 HIIDARLQGQY--PYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + L+G+Y P+ + L K L P R ++ ++++
Sbjct: 220 ELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 106/221 (47%), Gaps = 14/221 (6%)
Query: 68 FTFVELRAATRN-FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF 126
+ ++E + T+N F+ VLG+GGFG+V + +A GK + ++K + +G
Sbjct: 173 WKWLERQPVTKNTFRQYRVLGKGGFGEVCACQV--RATGKMYA--CKKLEKKRIKKRKGE 228
Query: 127 EEWQSEVNFLGRLSHPNLVRLLGYCWEDKE-LLLVYEFMQKGSLENHLFGRGASVQPLAW 185
+E L +++ V L Y +E K+ L LV M G L+ H++ G + P A
Sbjct: 229 AMALNEKQILEKVNS-RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEAR 287
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSH 245
+ I GL LH ++++YRD K NILLD +ISD GLA P
Sbjct: 288 AVFYAAEICC--GLEDLHR--ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-- 341
Query: 246 VTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
+ RV GT GY APE V D + G +L E++ G
Sbjct: 342 IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLG 137
+F+ + LG G G VFK SG V+A K ++ E + E+ L
Sbjct: 7 DFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
+ P +V G + D E+ + E M GSL+ L G + I K++I +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIK 115
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGY 256
GL +L K +++RD K SNIL++ K+ DFG++ +L S + S V TR Y
Sbjct: 116 GLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SY 169
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
+PE + H V+SD++ G+ LVE+ G
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLG 137
+F+ + LG G G VFK SG V+A K ++ E + E+ L
Sbjct: 7 DFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
+ P +V G + D E+ + E M GSL+ L G + I K++I +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIK 115
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGY 256
GL +L K +++RD K SNIL++ K+ DFG++ +L S + S V TR Y
Sbjct: 116 GLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SY 169
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
+PE + H V+SD++ G+ LVE+ G
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 106/221 (47%), Gaps = 14/221 (6%)
Query: 68 FTFVELRAATRN-FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF 126
+ ++E + T+N F+ VLG+GGFG+V + +A GK + ++K + +G
Sbjct: 173 WKWLERQPVTKNTFRQYRVLGKGGFGEVCACQV--RATGKMYA--CKKLEKKRIKKRKGE 228
Query: 127 EEWQSEVNFLGRLSHPNLVRLLGYCWEDKE-LLLVYEFMQKGSLENHLFGRGASVQPLAW 185
+E L +++ V L Y +E K+ L LV M G L+ H++ G + P A
Sbjct: 229 AMALNEKQILEKVNS-RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEAR 287
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSH 245
+ I GL LH ++++YRD K NILLD +ISD GLA P
Sbjct: 288 AVFYAAEICC--GLEDLHR--ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-- 341
Query: 246 VTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
+ RV GT GY APE V D + G +L E++ G
Sbjct: 342 IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VL G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 78
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 79 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 133
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 134 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 233
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 234 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 289
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 290 --------YLVIQGDERMHLPSPTDSNFYR 311
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 13/206 (6%)
Query: 82 SDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSH 141
D LG G FG V KG+ K K+ + ++ + N +L+ +E +E N + +L +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDN 65
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
P +VR++G C E + +LV E + G L +L + V+ NI +++ + G+ +
Sbjct: 66 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDK--NI-IELVHQVSMGMKY 120
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAP 259
L S+ ++RD A N+LL + AKISDFGL+K A +++ + G + + AP
Sbjct: 121 LEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 177
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILT 285
E + KSDV+ FGV++ E +
Sbjct: 178 ECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 78
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 79 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 133
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFG AKL + + +
Sbjct: 134 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 189
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 233
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 234 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 289
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 290 --------YLVIQGDERMHLPSPTDSNFYR 311
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 71
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 72 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFG AKL + + +
Sbjct: 127 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 182
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 226
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + +KC + RP RE++ ++ Q+
Sbjct: 227 -EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR--- 282
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 283 --------YLVIQGDERMHLPSPTDSNFYR 304
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 41/225 (18%)
Query: 89 GGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR--LSHPNLVR 146
G FG V+K L +AVK LQ + WQSE + H NL++
Sbjct: 26 GRFGCVWKAQL---------MNDFVAVKIF---PLQDKQSWQSEREIFSTPGMKHENLLQ 73
Query: 147 LLGYCWEDK------ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
+ E + EL L+ F KGSL ++L G + WN +A +RGL+
Sbjct: 74 FIAA--EKRGSNLEVELWLITAFHDKGSLTDYLKG-----NIITWNELCHVAETMSRGLS 126
Query: 201 FLHTS---------DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+LH + +RDFK+ N+LL TA ++DFGLA T +
Sbjct: 127 YLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV 186
Query: 252 GTYGYAAPEYVATG-----HLYVKSDVYGFGVVLVEILTGLRALD 291
GT Y APE + +++ D+Y G+VL E+++ +A D
Sbjct: 187 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N++ +G+G F KV GK + +I +LNS SLQ + EV +
Sbjct: 8 NYRLLKTIGKGNFAKV--KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKV 62
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L+HPN+V+L +K L LV E+ G + ++L G W ++ K A R
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-------W-MKEKEARAKFRQ 114
Query: 199 L--AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+ A + K +++RD KA N+LLD KI+DFG + + + G+ Y
Sbjct: 115 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDTFCGSPPY 171
Query: 257 AAPEYVATGHLYV--KSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRK 314
AAPE + G Y + DV+ GV+L +++G D GQ+ L E R
Sbjct: 172 AAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQN---------LKELR- 215
Query: 315 FRHIIDARLQGQY--PYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ L+G+Y P+ + L K L P R ++ ++++ + +
Sbjct: 216 -----ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELK 270
Query: 373 PRVRP 377
P V P
Sbjct: 271 PYVEP 275
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N++ +G+G F KV GK + +I +LNS SLQ + EV +
Sbjct: 15 NYRLLKTIGKGNFAKV--KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKV 69
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L+HPN+V+L +K L LV E+ G + ++L G + A + + + A +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQIVSAVQ- 127
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+ K +++RD KA N+LLD KI+DFG + + + G YAA
Sbjct: 128 ----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDAFCGAPPYAA 180
Query: 259 PEYVATGHLY--VKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFR 316
PE + G Y + DV+ GV+L +++G D GQ+ +
Sbjct: 181 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQN---------------LK 219
Query: 317 HIIDARLQGQY--PYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ + L+G+Y P+ + L K L P R ++ ++++
Sbjct: 220 ELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LG GGFG V + W+ + +G +A+K+ E S + E W E+ + +L+HPN+
Sbjct: 22 LGTGGFGYVLR-WIHQ------DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74
Query: 145 VRL------LGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
V L + LL E+ + G L +L IR ++ +
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSA 133
Query: 199 LAFLHTSDKQVIYRDFKASNILLD---GSYTAKISDFGLAKLGPSASQSHVTTRVMGTYG 255
L +LH + ++I+RD K NI+L KI D G AK Q + T +GT
Sbjct: 134 LRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQ 188
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTN 293
Y APE + V D + FG + E +TG R N
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLG 137
+F+ + LG G G VFK SG V+A K ++ E + E+ L
Sbjct: 26 DFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 78
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
+ P +V G + D E+ + E M GSL+ L G + I K++I +
Sbjct: 79 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIK 134
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGY 256
GL +L K +++RD K SNIL++ K+ DFG++ +L S + S V TR Y
Sbjct: 135 GLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SY 188
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
+PE + H V+SD++ G+ LVE+ G
Sbjct: 189 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LG GGFG V + W+ + +G +A+K+ E S + E W E+ + +L+HPN+
Sbjct: 23 LGTGGFGYVLR-WIHQ------DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 75
Query: 145 VRL------LGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
V L + LL E+ + G L +L IR ++ +
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSA 134
Query: 199 LAFLHTSDKQVIYRDFKASNILLD---GSYTAKISDFGLAKLGPSASQSHVTTRVMGTYG 255
L +LH + ++I+RD K NI+L KI D G AK Q + T +GT
Sbjct: 135 LRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQ 189
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTN 293
Y APE + V D + FG + E +TG R N
Sbjct: 190 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 71 VELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ 130
++++ +F+ +LG+G FGKVF + A+K L + + ++ +
Sbjct: 11 LQIKLKIEDFELHKMLGKGSFGKVFLAEF-------KKTNQFFAIKALKKDVVLMDDDVE 63
Query: 131 SEVNFLGRLS----HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWN 186
+ LS HP L + + L V E++ G L H+ S +
Sbjct: 64 CTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLS 119
Query: 187 IRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK---LGPSASQ 243
A GL FLH+ K ++YRD K NILLD KI+DFG+ K LG +
Sbjct: 120 RATFYAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-- 175
Query: 244 SHVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
T GT Y APE + G Y S D + FGV+L E+L G
Sbjct: 176 ---TNEFCGTPDYIAPE-ILLGQKYNHSVDWWSFGVLLYEMLIG 215
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 17/213 (7%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEV 133
+ NF+ +GEG +G V+K +G V+A+KK L++E+ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA-------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 56
Query: 134 NFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ L L+HPN+V+LL + +L LV+E + + L+ + + PL +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLP--LIKSYLF 113
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+GLAF H+ +V++RD K N+L++ K++DFGLA+ +++ V T
Sbjct: 114 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 254 YGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + Y + D++ G + E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 24/214 (11%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSEVNF 135
+F LG+G FG V+ + S ++A+K L L+ G E + + EV
Sbjct: 13 DFDIGRPLGKGKFGNVYLA-------RERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 136 LGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHL--FGRGASVQPLAWNIRLKIAI 193
L HPN++RL GY + + L+ E+ G++ L R + + L
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL---- 121
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + T + GT
Sbjct: 122 --ANALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGT 173
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGL 287
Y PE + K D++ GV+ E L G+
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGM 207
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLGRLSHPNL 144
LG G FG V ++E++ SG +K +N + Q E+ ++E+ L L HPN+
Sbjct: 30 LGSGAFGDVH--LVEERS-----SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
+++ + + +V E + G L + A + L+ ++ LA+ H+
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 205 SDKQVIYRDFKASNILLDGS---YTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEY 261
+ V+++D K NIL + KI DFGLA+L S S T GT Y APE
Sbjct: 143 --QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPE- 196
Query: 262 VATGHLYVKSDVYGFGVVLVEILTG 286
V + K D++ GVV+ +LTG
Sbjct: 197 VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 82 SDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSH 141
D LG G FG V KG+ K K+ + ++ + N +L+ +E +E N + +L +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDN 71
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
P +VR++G C E + +LV E + G L +L + V+ NI +++ + G+ +
Sbjct: 72 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDK--NI-IELVHQVSMGMKY 126
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAP 259
L S+ ++RD A N+LL + AKISDFGL+K A ++ + G + + AP
Sbjct: 127 LEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYAP 183
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILT 285
E + KSDV+ FGV++ E +
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 17/209 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLG 137
+F+ + LG G G VFK SG V+A K ++ E + E+ L
Sbjct: 10 DFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 62
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
+ P +V G + D E+ + E M GSL+ L G + I K++I +
Sbjct: 63 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIK 118
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
GL +L K +++RD K SNIL++ K+ DFG++ + +GT Y
Sbjct: 119 GLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDEMANEFVGTRSYM 173
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTG 286
+PE + H V+SD++ G+ LVE+ G
Sbjct: 174 SPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 18/212 (8%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 71
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 72 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFGLAKL + + +
Sbjct: 127 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ A E + +SDV+ +GV + E++T
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 73
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 74 ASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 128
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFG AKL + + +
Sbjct: 129 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 228
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + KC + RP RE++ ++ Q+
Sbjct: 229 -EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQR--- 284
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 285 --------YLVIQGDERMHLPSPTDSNFYR 306
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 47/330 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFL 136
FK VLG G FG V+KG W+ E K +A+K+L + S + +E E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVM 73
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQP---LAWNIRLKIAI 193
+ +P++ RLLG C + L+ + M G L +++ ++ L W +++
Sbjct: 74 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 128
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A+G+ +L D+++++RD A N+L+ KI+DFG AKL + + +
Sbjct: 129 --AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILT-GLRALDTNRPSGQHNLVDWIKPYLSEK 312
+ A E + +SDV+ +GV + E++T G + D S
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---------------- 228
Query: 313 RKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPKQ 372
+ I++ + P + + KC + RP RE++ ++ Q+
Sbjct: 229 -EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQR--- 284
Query: 373 PRVRPTHSMAHRQGQQPLHHRSPLHTNLDR 402
QG + +H SP +N R
Sbjct: 285 --------YLVIQGDERMHLPSPTDSNFYR 306
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 24/243 (9%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSEVNF 135
+F LG+G FG V+ + + ++A+K L L+ G E + + E+
Sbjct: 15 DFDIGRPLGKGKFGNVYLA-------REKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 136 LGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L HPN++R+ Y + K + L+ EF +G L L G + + ++
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL---- 123
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYG 255
A L + H +++VI+RD K N+L+ KI+DFG + PS + + GT
Sbjct: 124 ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLD 177
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQH----NLVDWIKPYLSE 311
Y PE + K D++ GV+ E L G+ D+ + H N+ P+LS+
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSD 237
Query: 312 KRK 314
K
Sbjct: 238 GSK 240
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 34/274 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
+G+G FG+VFKG +D + + V+A+K ++ E+ E+ Q E+ L + P +
Sbjct: 30 IGKGSFGEVFKG-IDNR------TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
+ G +D +L ++ E++ GS + L PL I +GL +LH+
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 137
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
K I+RD KA+N+LL K++DFG+A G +GT + APE +
Sbjct: 138 EKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 265 GHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQ 324
K+D++ G+ +E+ G P L+ P L+
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLE 240
Query: 325 GQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
G Y + + + CL EP RP+ +E+++
Sbjct: 241 GNY----SKPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 24/243 (9%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSEVNF 135
+F LG+G FG V+ + + ++A+K L L+ G E + + E+
Sbjct: 16 DFDIGRPLGKGKFGNVYLA-------REKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 68
Query: 136 LGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L HPN++R+ Y + K + L+ EF +G L L G + + ++
Sbjct: 69 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL---- 124
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYG 255
A L + H +++VI+RD K N+L+ KI+DFG + PS + + GT
Sbjct: 125 ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLD 178
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQH----NLVDWIKPYLSE 311
Y PE + K D++ GV+ E L G+ D+ + H N+ P+LS+
Sbjct: 179 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSD 238
Query: 312 KRK 314
K
Sbjct: 239 GSK 241
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSEVNFLGRLSHP 142
LG+G FG V+ + + ++A+K L L+ G E + + E+ L HP
Sbjct: 22 LGKGKFGNVYLA-------REKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N++R+ Y + K + L+ EF +G L L G + + ++ A L +
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL----ADALHYC 130
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
H +++VI+RD K N+L+ KI+DFG + PS + + GT Y PE +
Sbjct: 131 H--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMI 184
Query: 263 ATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQH----NLVDWIKPYLSEKRK 314
K D++ GV+ E L G+ D+ + H N+ P+LS+ K
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSK 240
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 39/277 (14%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
+G+G G V+ +G +A++++N + E +E+ + +PN+V
Sbjct: 29 IGQGASGTVYTAM-------DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
L EL +V E++ GSL + + +A R + L FLH++
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSN 136
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGL-AKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
QVI+RD K+ NILL + K++DFG A++ P S+ + ++GT + APE V
Sbjct: 137 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVGTPYWMAPEVVTR 191
Query: 265 GHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE---KRKFRHIIDA 321
K D++ G++ +E++ G P PYL+E + + +
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEG-------EP-----------PYLNENPLRALYLIATNG 233
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ Q P K + +CLE + + R S +E+++
Sbjct: 234 TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 34/274 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
+G+G FG+VFKG +D + + V+A+K ++ E+ E+ Q E+ L + P +
Sbjct: 15 IGKGSFGEVFKG-IDNR------TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
+ G +D +L ++ E++ GS + L PL I +GL +LH+
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 122
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
K I+RD KA+N+LL K++DFG+A G +GT + APE +
Sbjct: 123 EKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 265 GHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQ 324
K+D++ G+ +E+ G P L+ P L+
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLE 225
Query: 325 GQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
G Y + + + CL EP RP+ +E+++
Sbjct: 226 GNY----SKPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 130/303 (42%), Gaps = 56/303 (18%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLG 137
+++ V+G G V + AP K +A+K++N E Q +E E+ +
Sbjct: 16 DYELQEVIGSGATAVVQAAYC---APKKEK----VAIKRINLEKCQTSMDELLKEIQAMS 68
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLEN---HLFGRGASVQ-PLAWNIRLKIAI 193
+ HPN+V EL LV + + GS+ + H+ +G L + I
Sbjct: 69 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKL---GPSASQSHVTTRV 250
GL +LH + + I+RD KA NILL + +I+DFG++ G +++ V
Sbjct: 129 EVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 251 MGTYGYAAPEYVATGHLY-VKSDVYGFGVVLVEILTG-------------LRALDTNRPS 296
+GT + APE + Y K+D++ FG+ +E+ TG + L + PS
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246
Query: 297 GQHNLVD--WIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMR 354
+ + D +K Y + FR +I CL+ +P+ RP+
Sbjct: 247 LETGVQDKEMLKKY---GKSFRKMISL--------------------CLQKDPEKRPTAA 283
Query: 355 EVV 357
E++
Sbjct: 284 ELL 286
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 130/303 (42%), Gaps = 56/303 (18%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ-GFEEWQSEVNFLG 137
+++ V+G G V + AP K +A+K++N E Q +E E+ +
Sbjct: 11 DYELQEVIGSGATAVVQAAYC---APKKEK----VAIKRINLEKCQTSMDELLKEIQAMS 63
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLEN---HLFGRGASVQ-PLAWNIRLKIAI 193
+ HPN+V EL LV + + GS+ + H+ +G L + I
Sbjct: 64 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKL---GPSASQSHVTTRV 250
GL +LH + + I+RD KA NILL + +I+DFG++ G +++ V
Sbjct: 124 EVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 251 MGTYGYAAPEYVATGHLY-VKSDVYGFGVVLVEILTG-------------LRALDTNRPS 296
+GT + APE + Y K+D++ FG+ +E+ TG + L + PS
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 241
Query: 297 GQHNLVD--WIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMR 354
+ + D +K Y + FR +I CL+ +P+ RP+
Sbjct: 242 LETGVQDKEMLKKY---GKSFRKMISL--------------------CLQKDPEKRPTAA 278
Query: 355 EVV 357
E++
Sbjct: 279 ELL 281
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 34/274 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
+G+G FG+VFKG +D + + V+A+K ++ E+ E+ Q E+ L + P +
Sbjct: 15 IGKGSFGEVFKG-IDNR------TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
+ G +D +L ++ E++ GS + L PL I +GL +LH+
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 122
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
K I+RD KA+N+LL K++DFG+A G +GT + APE +
Sbjct: 123 EKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 265 GHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQ 324
K+D++ G+ +E+ G P L+ P L+
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLE 225
Query: 325 GQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
G Y + + + CL EP RP+ +E+++
Sbjct: 226 GNY----SKPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 25/239 (10%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N++ LGEG FGKV + G+ + +I K L +QG + E+++L
Sbjct: 5 NYQIVKTLGEGSFGKVKLAY--HTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 60
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP++++L E+++V E+ N LF ++ +
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQIISA 115
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+ + H ++++RD K N+LLD KI+DFGL+ + + + G+ YAA
Sbjct: 116 VEYCHRH--KIVHRDLKPENLLLDEHLNVKIADFGLSNI---MTDGNFLKTSCGSPNYAA 170
Query: 259 PEYVATGHLYV--KSDVYGFGVVLVEILT--------GLRALDTNRPSGQHNLVDWIKP 307
PE V +G LY + DV+ GV+L +L + L N +G + L ++ P
Sbjct: 171 PE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSP 228
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
R K D +G G F V+KG LD + + + + +KL Q F+E E L
Sbjct: 26 RFLKFDIEIGRGSFKTVYKG-LDTETTVEV-AWCELQDRKLTKSERQRFKE---EAEXLK 80
Query: 138 RLSHPNLVRLLGYCWED-----KELLLVYEFMQKGSLENHL--FGRGASVQPLAWNIRLK 190
L HPN+VR WE K ++LV E G+L+ +L F +W ++
Sbjct: 81 GLQHPNIVRFYD-SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI- 138
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDG-SYTAKISDFGLAKLGPSASQSHVTTR 249
+GL FLHT +I+RD K NI + G + + KI D GLA L ++
Sbjct: 139 -----LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKA 189
Query: 250 VMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
V+GT + APE Y +S DVY FG +E T
Sbjct: 190 VIGTPEFXAPEXYE--EKYDESVDVYAFGXCXLEXAT 224
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 32/212 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK-LNSESLQGFEEWQ-SEVNFLGRLSHPN 143
+GEG +G VFK +G ++A+KK L SE ++ E+ L +L HPN
Sbjct: 11 IGEGSYGVVFKC-------RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSL-ENHLFGRGAS---VQPLAWNIRLKIAIGAARGL 199
LV LL + L LV+E+ L E + RG V+ + W + +
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAV 115
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKL--GPSA-SQSHVTTRVMGTYGY 256
F H + I+RD K NIL+ K+ DFG A+L GPS V TR Y
Sbjct: 116 NFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR-----WY 168
Query: 257 AAPEYVATGHLY-VKSDVYGFGVVLVEILTGL 287
+PE + Y DV+ G V E+L+G+
Sbjct: 169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSGV 200
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 25/239 (10%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N++ LGEG FGKV + G+ + +I K L +QG + E+++L
Sbjct: 15 NYQIVKTLGEGSFGKVKLAY--HTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 70
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP++++L E+++V E+ N LF ++ +
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQIISA 125
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+ + H ++++RD K N+LLD KI+DFGL+ + + + G+ YAA
Sbjct: 126 VEYCHRH--KIVHRDLKPENLLLDEHLNVKIADFGLSNI---MTDGNFLKTSCGSPNYAA 180
Query: 259 PEYVATGHLYV--KSDVYGFGVVLVEILT--------GLRALDTNRPSGQHNLVDWIKP 307
PE V +G LY + DV+ GV+L +L + L N +G + L ++ P
Sbjct: 181 PE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSP 238
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 39/277 (14%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
+G+G G V+ +G +A++++N + E +E+ + +PN+V
Sbjct: 28 IGQGASGTVYTAM-------DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
L EL +V E++ GSL + + +A R + L FLH++
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSN 135
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGL-AKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
QVI+RD K+ NILL + K++DFG A++ P S+ + ++GT + APE V
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVGTPYWMAPEVVTR 190
Query: 265 GHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE---KRKFRHIIDA 321
K D++ G++ +E++ G P PYL+E + + +
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEG-------EP-----------PYLNENPLRALYLIATNG 232
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ Q P K + +CLE + + R S +E+++
Sbjct: 233 TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 25/239 (10%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N++ LGEG FGKV + G+ + +I K L +QG + E+++L
Sbjct: 9 NYQIVKTLGEGSFGKVKLAY--HTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 64
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP++++L E+++V E+ N LF ++ +
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQIISA 119
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+ + H ++++RD K N+LLD KI+DFGL+ + + + G+ YAA
Sbjct: 120 VEYCHRH--KIVHRDLKPENLLLDEHLNVKIADFGLSNI---MTDGNFLKTSCGSPNYAA 174
Query: 259 PEYVATGHLYV--KSDVYGFGVVLVEILT--------GLRALDTNRPSGQHNLVDWIKP 307
PE V +G LY + DV+ GV+L +L + L N +G + L ++ P
Sbjct: 175 PE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSP 232
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 97/224 (43%), Gaps = 27/224 (12%)
Query: 71 VELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ 130
++++ +F +LG+G FGKVF + A+K L + + ++ +
Sbjct: 10 LQIKLKIEDFILHKMLGKGSFGKVFLAEF-------KKTNQFFAIKALKKDVVLMDDDVE 62
Query: 131 SEVNFLGRLS----HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWN 186
+ LS HP L + + L V E++ G L H+ S +
Sbjct: 63 CTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLS 118
Query: 187 IRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK---LGPSASQ 243
A GL FLH+ K ++YRD K NILLD KI+DFG+ K LG +
Sbjct: 119 RATFYAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-- 174
Query: 244 SHVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
T GT Y APE + G Y S D + FGV+L E+L G
Sbjct: 175 ---TNXFCGTPDYIAPE-ILLGQKYNHSVDWWSFGVLLYEMLIG 214
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 38/276 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
+G+G FG+V+KG +D + + V+A+K ++ E+ E+ Q E+ L + P +
Sbjct: 27 IGKGSFGEVYKG-ID------NHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
R G + +L ++ E++ GS + L PL I +GL +LH+
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLHS 134
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
K I+RD KA+N+LL K++DFG+A G +GT + APE +
Sbjct: 135 ERK--IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 265 GHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQ 324
K+D++ G+ +E+ G P L+ P L+
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------------PTLE 237
Query: 325 GQY--PYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
GQ+ P+K + CL +P+ RP+ +E+++
Sbjct: 238 GQHSKPFKEFVE------ACLNKDPRFRPTAKELLK 267
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N++ +G+G F KV GK + +I +LNS SLQ + EV
Sbjct: 15 NYRLLKTIGKGNFAKV--KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIXKV 69
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L+HPN+V+L +K L LV E+ G + ++L G + A + + + A +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA-RAKFRQIVSAVQ- 127
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+ K +++RD KA N+LLD KI+DFG + + + G YAA
Sbjct: 128 ----YCHQKFIVHRDLKAENLLLDADXNIKIADFGFSN---EFTFGNKLDAFCGAPPYAA 180
Query: 259 PEYVATGHLY--VKSDVYGFGVVLVEILTGLRALD 291
PE + G Y + DV+ GV+L +++G D
Sbjct: 181 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 25/239 (10%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N++ LGEG FGKV + G+ + +I K L +QG + E+++L
Sbjct: 14 NYQIVKTLGEGSFGKVKLAY--HTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 69
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP++++L E+++V E+ N LF ++ +
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQIISA 124
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+ + H ++++RD K N+LLD KI+DFGL+ + + + G+ YAA
Sbjct: 125 VEYCHRH--KIVHRDLKPENLLLDEHLNVKIADFGLSNI---MTDGNFLKTSCGSPNYAA 179
Query: 259 PEYVATGHLYV--KSDVYGFGVVLVEILT--------GLRALDTNRPSGQHNLVDWIKP 307
PE V +G LY + DV+ GV+L +L + L N +G + L ++ P
Sbjct: 180 PE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSP 237
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 30/227 (13%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 49 SYIGEGAYGMVCSAY-------DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFG----RGASVQPLAWNIRLKIAIGAARG 198
N++ + D E M+ L HL G + Q L+ + RG
Sbjct: 102 NIIGI-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRG 156
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGYA 257
L ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 157 LKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 258 APEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 254
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-EWQSEVNF 135
+F LG+G FG V+ + S ++A+K L L+ G E + + EV
Sbjct: 13 DFDIGRPLGKGKFGNVYLA-------RERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 136 LGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHL--FGRGASVQPLAWNIRLKIAI 193
L HPN++RL GY + + L+ E+ G++ L R + + L
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL---- 121
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
A L++ H+ K+VI+RD K N+LL + KI+DFG + PS+ + + GT
Sbjct: 122 --ANALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC----GT 173
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGL 287
Y PE + K D++ GV+ E L G+
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGM 207
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 34/274 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
+G+G FG+VFKG +D + + V+A+K ++ E+ E+ Q E+ L + P +
Sbjct: 35 IGKGSFGEVFKG-IDNR------TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
+ G +D +L ++ E++ GS + L PL I +GL +LH+
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 142
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
K I+RD KA+N+LL K++DFG+A G +GT + APE +
Sbjct: 143 EKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 265 GHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQ 324
K+D++ G+ +E+ G P L+ P L+
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLE 245
Query: 325 GQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
G Y + + + CL EP RP+ +E+++
Sbjct: 246 GNY----SKPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 39/277 (14%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
+G+G G V+ +G +A++++N + E +E+ + +PN+V
Sbjct: 28 IGQGASGTVYTAM-------DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
L EL +V E++ GSL + + +A R + L FLH++
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSN 135
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGL-AKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
QVI+RD K+ NILL + K++DFG A++ P S+ + ++GT + APE V
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SEMVGTPYWMAPEVVTR 190
Query: 265 GHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE---KRKFRHIIDA 321
K D++ G++ +E++ G P PYL+E + + +
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEG-------EP-----------PYLNENPLRALYLIATNG 232
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ Q P K + +CL+ + + R S +E+++
Sbjct: 233 TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 39/277 (14%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
+G+G G V+ +G +A++++N + E +E+ + +PN+V
Sbjct: 28 IGQGASGTVYTAM-------DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
L EL +V E++ GSL + + +A R + L FLH++
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSN 135
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGL-AKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
QVI+RD K+ NILL + K++DFG A++ P S+ + ++GT + APE V
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPYWMAPEVVTR 190
Query: 265 GHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE---KRKFRHIIDA 321
K D++ G++ +E++ G P PYL+E + + +
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEG-------EP-----------PYLNENPLRALYLIATNG 232
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ Q P K + +CL+ + + R S +E+++
Sbjct: 233 TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 39/277 (14%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
+G+G G V+ +G +A++++N + E +E+ + +PN+V
Sbjct: 29 IGQGASGTVYTAM-------DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
L EL +V E++ GSL + + +A R + L FLH++
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSN 136
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGL-AKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
QVI+R+ K+ NILL + K++DFG A++ P S+ + ++GT + APE V
Sbjct: 137 --QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPYWMAPEVVTR 191
Query: 265 GHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE---KRKFRHIIDA 321
K D++ G++ +E++ G P PYL+E + + +
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEG-------EP-----------PYLNENPLRALYLIATNG 233
Query: 322 RLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ Q P K + +CLE + + R S +E+++
Sbjct: 234 TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--- 130
R F+ +LG+G FGKV + EKA G+ A+K L E + +E
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGR-----YYAMKILKKEVIVAKDEVAHTL 196
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
+E L HP L L L V E+ G L HL + A +
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 256
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
I L +LH S+K V+YRD K N++LD KI+DFGL K G + T
Sbjct: 257 IV----SALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--F 309
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE + D +G GVV+ E++ G
Sbjct: 310 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--- 130
R F+ +LG+G FGKV + EKA G+ A+K L E + +E
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGR-----YYAMKILKKEVIVAKDEVAHTL 199
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
+E L HP L L L V E+ G L HL + A +
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
I L +LH S+K V+YRD K N++LD KI+DFGL K G + T
Sbjct: 260 IV----SALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--F 312
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE + D +G GVV+ E++ G
Sbjct: 313 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 348
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 92/216 (42%), Gaps = 18/216 (8%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--- 130
+ +F +LG+G FGKV + EKA G+ A+K L E + +E
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGR-----YYAMKILRKEVIIAKDEVAHTV 56
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
+E L HP L L L V E+ G L HL + A +
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 116
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
I L +LH+ D V+YRD K N++LD KI+DFGL K G S + T
Sbjct: 117 IV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--F 168
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE + D +G GVV+ E++ G
Sbjct: 169 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 204
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 17/215 (7%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N++ +G+G F KV G+ + +I +LN SLQ + EV +
Sbjct: 13 NYRLLKTIGKGNFAKV--KLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKI 67
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L+HPN+V+L +K L L+ E+ G + ++L G + A + + + + A +
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS-KFRQIVSAVQ- 125
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+ K++++RD KA N+LLD KI+DFG + + G+ YAA
Sbjct: 126 ----YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDTFCGSPPYAA 178
Query: 259 PEYVATGHLYV--KSDVYGFGVVLVEILTGLRALD 291
PE + G Y + DV+ GV+L +++G D
Sbjct: 179 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 92/216 (42%), Gaps = 18/216 (8%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--- 130
+ +F +LG+G FGKV + EKA G+ A+K L E + +E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGR-----YYAMKILRKEVIIAKDEVAHTV 53
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
+E L HP L L L V E+ G L HL + A +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
I L +LH+ D V+YRD K N++LD KI+DFGL K G S + T
Sbjct: 114 IV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--F 165
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE + D +G GVV+ E++ G
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPN 143
VLG G F +V ++K K ++A+K + E+L+G E ++E+ L ++ HPN
Sbjct: 25 VLGTGAFSEVILA--EDKRTQK-----LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V L L L+ + + G L + + +G + A + ++ + +LH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL----DAVKYLH 133
Query: 204 TSDKQVIYRDFKASNIL---LDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPE 260
D +++RD K N+L LD ISDFGL+K+ S V + GT GY APE
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPE 188
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTG 286
+A D + GV+ +L G
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 92/216 (42%), Gaps = 18/216 (8%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--- 130
+ +F +LG+G FGKV + EKA G+ A+K L E + +E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGR-----YYAMKILRKEVIIAKDEVAHTV 53
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
+E L HP L L L V E+ G L HL + A +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
I L +LH+ D V+YRD K N++LD KI+DFGL K G S + T
Sbjct: 114 IV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--F 165
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE + D +G GVV+ E++ G
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 66/311 (21%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+F+ LG GGFG VF+ K + + ++ N E + E+ EV L +
Sbjct: 6 DFEPIQCLGRGGFGVVFEA----KNKVDDCNYAIKRIRLPNRELAR--EKVMREVKALAK 59
Query: 139 LSHPNLVRLLGYCWEDKE-------------LLLVYEFMQKGSLENHLFGRGASVQPLAW 185
L HP +VR W +K L + + +K +L++ + GR +++
Sbjct: 60 LEHPGIVRYFN-AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR-CTIEERER 117
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--------- 236
++ L I + A + FLH+ K +++RD K SNI K+ DFGL
Sbjct: 118 SVCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 237 --LGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNR 294
L P + + T +V GT Y +PE + K D++ G++L E+L
Sbjct: 176 TVLTPMPAYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY--------- 225
Query: 295 PSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYP------YKAAYQIAQLSLKCLEAEPK 348
P+ ++ + R + D R ++P Y Y + Q L P
Sbjct: 226 ------------PFSTQMERVRTLTDVR-NLKFPPLFTQKYPCEYVMVQ---DMLSPSPM 269
Query: 349 HRPSMREVVET 359
RP ++E
Sbjct: 270 ERPEAINIIEN 280
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 105/233 (45%), Gaps = 29/233 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-------SESLQGF-EEWQSEVNFLG 137
LG G +G+V EK + VI + + +++++ F EE +E++ L
Sbjct: 44 LGSGAYGEVL--LCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
L HPN+++L + K LV EF + G L + R + A NI +I
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQI----LS 157
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYT---AKISDFGLAKLGPSASQSHVTTRVMGTY 254
G+ +LH + +++RD K NILL+ + KI DFGL+ S+ + +GT
Sbjct: 158 GICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSF---FSKDYKLRDRLGTA 212
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
Y APE V K DV+ GV++ +L G P G N D IK
Sbjct: 213 YYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGY------PPFGGQNDQDIIKK 258
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPN 143
VLG G F +V ++K K ++A+K + E+L+G E ++E+ L ++ HPN
Sbjct: 25 VLGTGAFSEVILA--EDKRTQK-----LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V L L L+ + + G L + + +G + A + ++ + +LH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL----DAVKYLH 133
Query: 204 TSDKQVIYRDFKASNIL---LDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPE 260
D +++RD K N+L LD ISDFGL+K+ S V + GT GY APE
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPE 188
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTG 286
+A D + GV+ +L G
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG V GK +A+K + S+ +E+ E + LSH LV
Sbjct: 16 LGTGQFGVV--------KYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLV 66
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+L G C + + + ++ E+M G L N+L Q L++ + +L +
Sbjct: 67 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLES- 122
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
KQ ++RD A N L++ K+SDFGL++ T+ V + ++ PE +
Sbjct: 123 -KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFPVRWSPPEVLM 178
Query: 264 TGHLYVKSDVYGFGVVLVEILT 285
KSD++ FGV++ EI +
Sbjct: 179 YSKFSSKSDIWAFGVLMWEIYS 200
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPN 143
VLG G F +V ++K K ++A+K + E+L+G E ++E+ L ++ HPN
Sbjct: 25 VLGTGAFSEVILA--EDKRTQK-----LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V L L L+ + + G L + + +G + A + ++ + +LH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL----DAVKYLH 133
Query: 204 TSDKQVIYRDFKASNIL---LDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPE 260
D +++RD K N+L LD ISDFGL+K+ S V + GT GY APE
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPE 188
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTG 286
+A D + GV+ +L G
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG V GK +A+K + S+ +E+ E + LSH LV
Sbjct: 12 LGTGQFGVV--------KYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLV 62
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+L G C + + + ++ E+M G L N+L Q L++ + +L +
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLES- 118
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
KQ ++RD A N L++ K+SDFGL++ T+ V + ++ PE +
Sbjct: 119 -KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFPVRWSPPEVLM 174
Query: 264 TGHLYVKSDVYGFGVVLVEILT 285
KSD++ FGV++ EI +
Sbjct: 175 YSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N++ +G+G F KV G+ + +I +LN SLQ + EV +
Sbjct: 16 NYRLLKTIGKGNFAKV--KLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKI 70
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L+HPN+V+L +K L L+ E+ G + ++L G + A + + + + A +
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS-KFRQIVSAVQ- 128
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+ K++++RD KA N+LLD KI+DFG + + G YAA
Sbjct: 129 ----YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAA 181
Query: 259 PEYVATGHLYV--KSDVYGFGVVLVEILTGLRALD 291
PE + G Y + DV+ GV+L +++G D
Sbjct: 182 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 77 TRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNF 135
+ +F+ ++LGEG +G V +G ++A+KK+ F E+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA-------THKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 136 LGRLSHPNLVRLLGYCWED-----KELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
L H N++ + D E+ ++ E MQ R S Q L+ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVISTQMLSDDHIQY 116
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKL---------GPSA 241
R + LH S+ VI+RD K SN+L++ + K+ DFGLA++ P+
Sbjct: 117 FIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 242 SQSHVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEIL 284
QS +T V T Y APE + T Y ++ DV+ G +L E+
Sbjct: 175 QQSGMTEXV-ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 77 TRNFKSDTV-----LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQ--GFE-E 128
TR+F D LG+G FG V+ + S ++A+K L ++ G E +
Sbjct: 17 TRHFTIDDFEIGRPLGKGKFGNVYLA-------REKKSHFIVALKVLFKSQIEKEGVEHQ 69
Query: 129 WQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR 188
+ E+ L HPN++RL Y ++ + + L+ E+ +G L L + ++ +
Sbjct: 70 LRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL------QKSCTFDEQ 123
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTT 248
I A ++ K+VI+RD K N+LL KI+DFG + PS + +
Sbjct: 124 RTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC- 182
Query: 249 RVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y PE + K D++ GV+ E+L G
Sbjct: 183 ---GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG V GK +A+K + S+ +E+ E + LSH LV
Sbjct: 17 LGTGQFGVV--------KYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLV 67
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+L G C + + + ++ E+M G L N+L Q L++ + +L +
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLES- 123
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
KQ ++RD A N L++ K+SDFGL++ T+ V + ++ PE +
Sbjct: 124 -KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFPVRWSPPEVLM 179
Query: 264 TGHLYVKSDVYGFGVVLVEILT 285
KSD++ FGV++ EI +
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 77 TRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNF 135
+ +F+ ++LGEG +G V +G ++A+KK+ F E+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA-------THKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 136 LGRLSHPNLVRLLGYCWED-----KELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
L H N++ + D E+ ++ E MQ R S Q L+ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVISTQMLSDDHIQY 116
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKL---------GPSA 241
R + LH S+ VI+RD K SN+L++ + K+ DFGLA++ P+
Sbjct: 117 FIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 242 SQSHVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEIL 284
QS +T V T Y APE + T Y ++ DV+ G +L E+
Sbjct: 175 QQSGMTEYV-ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 113 IAVKKLNSESLQG---FEEWQSEVNFLGRLSHPNLVRLLGYCWEDKEL------LLVYEF 163
+AVK L ++ + + ++ E L+HP +V + Y + E +V E+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEY 97
Query: 164 MQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG 223
+ +L + + G P+ +++ A + L F H + +I+RD K +NI++
Sbjct: 98 VDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISA 151
Query: 224 SYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVE 282
+ K+ DFG+A+ + S + T V+GT Y +PE + +SDVY G VL E
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 283 ILTGLRALDTNRPSG---QHNLVDWIKP 307
+LTG + P QH D I P
Sbjct: 212 VLTGEPPFTGDSPVSVAYQHVREDPIPP 239
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--- 130
R F+ +LG+G FGKV + EKA G+ A+K L E + +E
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGR-----YYAMKILKKEVIVAKDEVAHTL 57
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
+E L HP L L L V E+ G L HL + A +
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 117
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
I L +LH S+K V+YRD K N++LD KI+DFGL K G
Sbjct: 118 IV----SALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG--IKDGATMKXF 170
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE + D +G GVV+ E++ G
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--- 130
R F+ +LG+G FGKV + EKA G+ A+K L E + +E
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGR-----YYAMKILKKEVIVAKDEVAHTL 56
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
+E L HP L L L V E+ G L HL + A +
Sbjct: 57 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 116
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
I L +LH S+K V+YRD K N++LD KI+DFGL K G
Sbjct: 117 IV----SALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG--IKDGATMKXF 169
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE + D +G GVV+ E++ G
Sbjct: 170 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 205
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--- 130
R F+ +LG+G FGKV + EKA G+ A+K L E + +E
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGR-----YYAMKILKKEVIVAKDEVAHTL 58
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
+E L HP L L L V E+ G L HL + A +
Sbjct: 59 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 118
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
I L +LH S+K V+YRD K N++LD KI+DFGL K G
Sbjct: 119 IV----SALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG--IKDGATMKXF 171
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE + D +G GVV+ E++ G
Sbjct: 172 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 207
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG V GK +A+K + S+ +E+ E + LSH LV
Sbjct: 32 LGTGQFGVV--------KYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLV 82
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+L G C + + + ++ E+M G L N+L Q L++ + +L +
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLES- 138
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
KQ ++RD A N L++ K+SDFGL++ T+ V + ++ PE +
Sbjct: 139 -KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFPVRWSPPEVLM 194
Query: 264 TGHLYVKSDVYGFGVVLVEILT 285
KSD++ FGV++ EI +
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 113 IAVKKLNSESLQG---FEEWQSEVNFLGRLSHPNLVRLLGYCWEDKEL------LLVYEF 163
+AVK L ++ + + ++ E L+HP +V + Y + E +V E+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEY 97
Query: 164 MQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG 223
+ +L + + G P+ +++ A + L F H + +I+RD K +NI++
Sbjct: 98 VDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQN--GIIHRDVKPANIMISA 151
Query: 224 SYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVE 282
+ K+ DFG+A+ + S + T V+GT Y +PE + +SDVY G VL E
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 283 ILTGLRALDTNRPSG---QHNLVDWIKP 307
+LTG + P QH D I P
Sbjct: 212 VLTGEPPFTGDSPDSVAYQHVREDPIPP 239
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 113 IAVKKLNSESLQG---FEEWQSEVNFLGRLSHPNLVRLLGYCWEDKEL------LLVYEF 163
+AVK L ++ + + ++ E L+HP +V + Y + E +V E+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEY 97
Query: 164 MQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG 223
+ +L + + G P+ +++ A + L F H + +I+RD K +NIL+
Sbjct: 98 VDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQN--GIIHRDVKPANILISA 151
Query: 224 SYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVE 282
+ K+ DFG+A+ + S + T V+GT Y +PE + +SDVY G VL E
Sbjct: 152 TNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 283 ILTGLRALDTNRPSG---QHNLVDWIKP 307
+LTG + P QH D I P
Sbjct: 212 VLTGEPPFTGDSPVSVAYQHVREDPIPP 239
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--- 130
+ +F +LG+G FGKV + EKA G+ A+K L E + +E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGR-----YYAMKILRKEVIIAKDEVAHTV 53
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
+E L HP L L L V E+ G L HL + A +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
I L +LH+ D V+YRD K N++LD KI+DFGL K G S
Sbjct: 114 IV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEG--ISDGATMKXF 165
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE + D +G GVV+ E++ G
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
+FK +LGEG F V E A + + ++ + + E+ + + +V +
Sbjct: 37 EDFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MS 92
Query: 138 RLSHPNLVRLLGYCWEDKE-LLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
RL HP V+L +C++D E L + + G L ++ G+ + +I
Sbjct: 93 RLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV---- 147
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYG 255
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT
Sbjct: 148 SALEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQ 204
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILTGL 287
Y +PE + SD++ G ++ +++ GL
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 236
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG V GK +A+K + S+ +E+ E + LSH LV
Sbjct: 23 LGTGQFGVV--------KYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLV 73
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+L G C + + + ++ E+M G L N+L Q L++ + +L +
Sbjct: 74 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLES- 129
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY--GYAAPEYVA 263
KQ ++RD A N L++ K+SDFGL++ T+ V + ++ PE +
Sbjct: 130 -KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFPVRWSPPEVLM 185
Query: 264 TGHLYVKSDVYGFGVVLVEILT 285
KSD++ FGV++ EI +
Sbjct: 186 YSKFSSKSDIWAFGVLMWEIYS 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK +LGEG F V E A + + ++ + + E+ + + +V + R
Sbjct: 11 DFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MSR 66
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 122
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYA 257
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 123 LEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYV 179
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAGL 209
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--- 130
+ +F +LG+G FGKV + EKA G+ A+K L E + +E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGR-----YYAMKILRKEVIIAKDEVAHTV 53
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
+E L HP L L L V E+ G L HL + A +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
I L +LH+ D V+YRD K N++LD KI+DFGL K G S
Sbjct: 114 IV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEG--ISDGATMKXF 165
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE + D +G GVV+ E++ G
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG V GK +A+K + S+ +E+ E + LSH LV
Sbjct: 32 LGTGQFGVV--------KYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLV 82
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+L G C + + + ++ E+M G L N+L Q L++ + +L +
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLES- 138
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYAAPEYVAT 264
KQ ++RD A N L++ K+SDFGL++ + S V ++ ++ PE +
Sbjct: 139 -KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF--PVRWSPPEVLMY 195
Query: 265 GHLYVKSDVYGFGVVLVEILT 285
KSD++ FGV++ EI +
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYS 216
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 125/293 (42%), Gaps = 32/293 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPNL 144
LG G FG+V++G + S +AVK L + E ++ E + +L+H N+
Sbjct: 39 LGHGAFGEVYEGQVSGMP--NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 96
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLF-GRGASVQP--LAWNIRLKIAIGAARGLAF 201
VR +G + ++ E M G L++ L R QP LA L +A A G +
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
L + I+RD A N LL AKI DFG+A+ AS M +
Sbjct: 157 LE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE-KRKFRH 317
PE G K+D + FGV+L EI + + ++ PY S+ ++
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYM-PYPSKSNQEVLE 257
Query: 318 IIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ + + P + ++ +C + +P+ RP+ + LER++ Q P
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII---LERIEYCTQDP 307
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK +LGEG F V E A + + ++ + + E+ + + +V + R
Sbjct: 10 DFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MSR 65
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 66 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 121
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYA 257
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 122 LEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYV 178
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAGL 208
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG V GK +A+K + S+ +E+ E + LSH LV
Sbjct: 17 LGTGQFGVV--------KYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLV 67
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+L G C + + + ++ E+M G L N+L Q L++ + +L +
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLES- 123
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-----PSASQSHVTTRVMGTYGYAAPE 260
KQ ++RD A N L++ K+SDFGL++ S+ S R ++ PE
Sbjct: 124 -KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR------WSPPE 176
Query: 261 YVATGHLYVKSDVYGFGVVLVEILT 285
+ KSD++ FGV++ EI +
Sbjct: 177 VLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
+FK +LGEG F V E A + + ++ + + E+ + + +V +
Sbjct: 33 EDFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MS 88
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
RL HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 89 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----S 144
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGY 256
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ + V GT Y
Sbjct: 145 ALEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQY 201
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 232
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK +LGEG F V E A + + ++ + + E+ + + +V + R
Sbjct: 9 DFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MSR 64
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 120
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYA 257
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 121 LEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYV 177
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGL 207
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 12/210 (5%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK +LGEG F V E A + + ++ + + E+ + + +V + R
Sbjct: 33 DFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MSR 88
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIV----SA 144
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYA 257
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ + V GT Y
Sbjct: 145 LEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYV 201
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 202 SPELLTEKSASKSSDLWALGCIIYQLVAGL 231
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 28/221 (12%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES------LQGFEEW 129
A + ++ +GEG +GKVFK A G +A+K++ ++ L E
Sbjct: 9 ADQQYECVAEIGEGAYGKVFK------ARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 130 QSEVNFLGRLSHPNLVRLLGYCW---EDKE--LLLVYEFMQKGSLENHLFGRGASVQPLA 184
+ + L HPN+VRL C D+E L LV+E + + L +L +P
Sbjct: 63 -AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL---DKVPEPGV 117
Query: 185 WNIRLK-IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ 243
+K + RGL FLH+ +V++RD K NIL+ S K++DFGLA++ S
Sbjct: 118 PTETIKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSF 172
Query: 244 SHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 284
T V+ T Y APE + D++ G + E+
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 24/230 (10%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL---QGFEEWQSEVNF 135
+F ++G GGFG+V+ K+ +G + A+K L+ + + QG +E
Sbjct: 190 DFSVHRIIGRGGFGEVY-------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 136 LGRLSHPN--LVRLLGYCWEDKELL-LVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
L +S + + + Y + + L + + M G L HL G + ++R
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA---DMRF--- 296
Query: 193 IGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMG 252
A L H ++ V+YRD K +NILLD +ISD GLA S + H + +G
Sbjct: 297 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VG 352
Query: 253 TYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
T+GY APE + G Y S D + G +L ++L G ++ +H +
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 24/230 (10%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL---QGFEEWQSEVNF 135
+F ++G GGFG+V+ K+ +G + A+K L+ + + QG +E
Sbjct: 190 DFSVHRIIGRGGFGEVY-------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 136 LGRLSHPN--LVRLLGYCWEDKELL-LVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
L +S + + + Y + + L + + M G L HL G + ++R
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA---DMRF--- 296
Query: 193 IGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMG 252
A L H ++ V+YRD K +NILLD +ISD GLA S + H + +G
Sbjct: 297 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VG 352
Query: 253 TYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
T+GY APE + G Y S D + G +L ++L G ++ +H +
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK +LGEG F V E A + + ++ + + E+ + + +V + R
Sbjct: 8 DFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MSR 63
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 119
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYA 257
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 120 LEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYV 176
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAGL 206
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 24/230 (10%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL---QGFEEWQSEVNF 135
+F ++G GGFG+V+ K+ +G + A+K L+ + + QG +E
Sbjct: 189 DFSVHRIIGRGGFGEVY-------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 241
Query: 136 LGRLSHPN--LVRLLGYCWEDKELL-LVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
L +S + + + Y + + L + + M G L HL G + ++R
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA---DMRF--- 295
Query: 193 IGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMG 252
A L H ++ V+YRD K +NILLD +ISD GLA S + H + +G
Sbjct: 296 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VG 351
Query: 253 TYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
T+GY APE + G Y S D + G +L ++L G ++ +H +
Sbjct: 352 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--- 130
+ +F +LG+G FGKV + EKA G+ A+K L E + +E
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGR-----YYAMKILRKEVIIAKDEVAHTV 58
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
+E L HP L L L V E+ G L HL + A +
Sbjct: 59 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 118
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
I L +LH+ D V+YRD K N++LD KI+DFGL K G S
Sbjct: 119 IV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEG--ISDGATMKXF 170
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE + D +G GVV+ E++ G
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 24/230 (10%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL---QGFEEWQSEVNF 135
+F ++G GGFG+V+ K+ +G + A+K L+ + + QG +E
Sbjct: 190 DFSVHRIIGRGGFGEVY-------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 136 LGRLSHPN--LVRLLGYCWEDKELL-LVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
L +S + + + Y + + L + + M G L HL G + ++R
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA---DMRF--- 296
Query: 193 IGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMG 252
A L H ++ V+YRD K +NILLD +ISD GLA S + H + +G
Sbjct: 297 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VG 352
Query: 253 TYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
T+GY APE + G Y S D + G +L ++L G ++ +H +
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
+FK +LGEG F V E A + + ++ + + E+ + + +V +
Sbjct: 29 EDFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MS 84
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
RL HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 85 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----S 140
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGY 256
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ + V GT Y
Sbjct: 141 ALEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQY 197
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 29 SYIGEGAYGMVCSAY-------DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 135
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 136 GLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 234
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 29 SYIGEGAYGMVCSAY-------DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 135
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 136 GLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 234
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPN 143
VLG G F +V ++K K ++A+K + ++L+G E ++E+ L ++ HPN
Sbjct: 25 VLGTGAFSEVILA--EDKRTQK-----LVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN 77
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V L L L+ + + G L + + +G + A + ++ + +LH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL----DAVKYLH 133
Query: 204 TSDKQVIYRDFKASNIL---LDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPE 260
D +++RD K N+L LD ISDFGL+K+ S V + GT GY APE
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPE 188
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTG 286
+A D + GV+ +L G
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 113 IAVKKLNSESLQG---FEEWQSEVNFLGRLSHPNLVRLLGYCWEDKEL------LLVYEF 163
+AVK L ++ + + ++ E L+HP +V + Y + E +V E+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEY 97
Query: 164 MQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG 223
+ +L + + G P+ +++ A + L F H + +I+RD K +NI++
Sbjct: 98 VDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQN--GIIHRDVKPANIMISA 151
Query: 224 SYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVE 282
+ K+ DFG+A+ + S + T V+GT Y +PE + +SDVY G VL E
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 283 ILTGLRALDTNRPSG---QHNLVDWIKP 307
+LTG + P QH D I P
Sbjct: 212 VLTGEPPFTGDSPVSVAYQHVREDPIPP 239
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 29 SYIGEGAYGMVCSAY-------DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 135
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 136 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 234
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--- 130
+ +F +LG+G FGKV + EKA G+ A+K L E + +E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGR-----YYAMKILRKEVIIAKDEVAHTV 53
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
+E L HP L L L V E+ G L HL + A +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
I L +LH+ D V+YRD K N++LD KI+DFGL K G S
Sbjct: 114 IV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEG--ISDGATMKXF 165
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT Y APE + D +G GVV+ E++ G
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 125/293 (42%), Gaps = 32/293 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPNL 144
LG G FG+V++G + S +AVK L + E ++ E + +L+H N+
Sbjct: 53 LGHGAFGEVYEGQVSGMP--NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 110
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLF-GRGASVQP--LAWNIRLKIAIGAARGLAF 201
VR +G + ++ E M G L++ L R QP LA L +A A G +
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
L + I+RD A N LL AKI DFG+A+ AS M +
Sbjct: 171 LE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE-KRKFRH 317
PE G K+D + FGV+L EI + + ++ PY S+ ++
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYM-PYPSKSNQEVLE 271
Query: 318 IIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ + + P + ++ +C + +P+ RP+ + LER++ Q P
Sbjct: 272 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII---LERIEYCTQDP 321
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 113 IAVKKLNSESLQG---FEEWQSEVNFLGRLSHPNLVRLLGYCWEDKEL------LLVYEF 163
+AVK L ++ + + ++ E L+HP +V + Y + E +V E+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEY 97
Query: 164 MQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG 223
+ +L + + G P+ +++ A + L F H + +I+RD K +NI++
Sbjct: 98 VDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQN--GIIHRDVKPANIMISA 151
Query: 224 SYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVE 282
+ K+ DFG+A+ + S + T V+GT Y +PE + +SDVY G VL E
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 283 ILTGLRALDTNRPSG---QHNLVDWIKP 307
+LTG + P QH D I P
Sbjct: 212 VLTGEPPFTGDSPVSVAYQHVREDPIPP 239
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK +LGEG F V E A + + ++ + + E+ + + +V + R
Sbjct: 31 DFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MSR 86
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 142
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYA 257
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 143 LEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV-GTAQYV 199
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 33 SYIGEGAYGMVCSAY-------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKCQHLSNDHICYFLYQILR 139
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 140 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 238
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK +LGEG F V E A + + ++ + + E+ + + +V + R
Sbjct: 31 DFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MSR 86
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 142
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYA 257
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 143 LEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYV 199
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK +LGEG F V E A + + ++ + + E+ + + +V + R
Sbjct: 31 DFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MSR 86
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 142
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYA 257
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 143 LEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYV 199
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 28/221 (12%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES------LQGFEEW 129
A + ++ +GEG +GKVFK A G +A+K++ ++ L E
Sbjct: 9 ADQQYECVAEIGEGAYGKVFK------ARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 130 QSEVNFLGRLSHPNLVRLLGYCW---EDKE--LLLVYEFMQKGSLENHLFGRGASVQPLA 184
+ + L HPN+VRL C D+E L LV+E + + L +L +P
Sbjct: 63 -AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL---DKVPEPGV 117
Query: 185 WNIRLK-IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ 243
+K + RGL FLH+ +V++RD K NIL+ S K++DFGLA++ S
Sbjct: 118 PTETIKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSF 172
Query: 244 SHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 284
T V+ T Y APE + D++ G + E+
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 31 SYIGEGAYGMVCSAY-------DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 83
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 137
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 138 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 236
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK +LGEG F V E A + + ++ + + E+ + + +V + R
Sbjct: 33 DFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MSR 88
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 144
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYA 257
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 145 LEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYV 201
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK +LGEG F V E A + + ++ + + E+ + + +V + R
Sbjct: 15 DFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MSR 70
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 71 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 126
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYA 257
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 127 LEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYV 183
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVAGL 213
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ-SEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 33 SYIGEGAYGMVCSAY-------DNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHE 85
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 139
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 140 GLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 238
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 33 SYIGEGAYGMVCSAY-------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 139
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 140 GLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 238
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
+GEG G V EK GK +AVKK++ Q E +EV + H N+V
Sbjct: 53 IGEGSTGIVCIA--TEKHTGKQ-----VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVV 105
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+ EL +V EF++ G+L + + + + +A + + R L++LH
Sbjct: 106 DMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLH-- 158
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR--VMGTYGYAAPEYVA 263
++ VI+RD K+ +ILL K+SDFG + V R ++GT + APE ++
Sbjct: 159 NQGVIHRDIKSDSILLTSDGRIKLSDFGFC----AQVSKEVPKRKXLVGTPYWMAPEVIS 214
Query: 264 TGHLYVKSDVYGFGVVLVEILTG 286
+ D++ G++++E++ G
Sbjct: 215 RLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHPNL 144
+GEG +G V + T +A+KK++ Q + + E+ L R H N+
Sbjct: 51 IGEGAYGMVSSAY-------DHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
+ + + ++ + +E L+ S Q L+ + RGL ++H+
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS-QQLSNDHICYFLYQILRGLKYIHS 162
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGYAAPEYVA 263
++ V++RD K SN+L++ + KI DFGLA++ P + T + T Y APE +
Sbjct: 163 AN--VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 264 TGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
Y KS D++ G +L E+L +NRP G+H L
Sbjct: 221 NSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 254
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK +LGEG F V E A + + ++ + + E+ + + +V + R
Sbjct: 33 DFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MSR 88
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 144
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYA 257
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 145 LEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYV 201
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 27 SYIGEGAYGMVCSAY-------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 79
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 133
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 134 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 232
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 27 SYIGEGAYGMVCSAY-------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 79
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 133
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 134 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 232
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 49 SYIGEGAYGMVCSAY-------DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 155
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 156 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 213
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 254
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPNL 144
LGEG + V+KG + ++A+K++ E +G EV+ L L H N+
Sbjct: 10 LGEGTYATVYKG-------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V L +K L LV+E++ K L+ +L G + N++L RGLA+ H
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIIN--MHNVKL-FLFQLLRGLAYCHR 118
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
++V++RD K N+L++ K++DFGLA+ ++++ V T Y P+ +
Sbjct: 119 --QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLG 174
Query: 265 GHLY-VKSDVYGFGVVLVEILTG 286
Y + D++G G + E+ TG
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATG 197
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 34 SYIGEGAYGMVCSAY-------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 86
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 140
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 141 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 198
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 239
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 12/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
+FK +LGEG F V E A + + ++ + + E+ + + +V +
Sbjct: 33 EDFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MS 88
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
RL HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 89 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----S 144
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGY 256
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 145 ALEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 201
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 35 SYIGEGAYGMVCSAY-------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 87
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 88 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 141
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 142 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 199
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 200 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 240
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 26 SYIGEGAYGMVCSAY-------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 78
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 79 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 132
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 133 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 190
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 191 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 231
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 33 SYIGEGAYGMVCSAY-------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 139
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 140 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 238
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 37 SYIGEGAYGMVCSAY-------DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 89
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 143
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 144 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 201
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 202 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 242
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 29 SYIGEGAYGMVCSAY-------DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 135
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 136 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 234
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 29 SYIGEGAYGMVCSAY-------DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 135
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 136 GLKYIHSAN--VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK +LGEG F V E A + + ++ + + E+ + + +V + R
Sbjct: 33 DFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MSR 88
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 144
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYA 257
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 145 LEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYV 201
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 28/221 (12%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES------LQGFEEW 129
A + ++ +GEG +GKVFK A G +A+K++ ++ L E
Sbjct: 9 ADQQYECVAEIGEGAYGKVFK------ARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 130 QSEVNFLGRLSHPNLVRLLGYCW---EDKE--LLLVYEFMQKGSLENHLFGRGASVQPLA 184
+ + L HPN+VRL C D+E L LV+E + + L +L +P
Sbjct: 63 -AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL---DKVPEPGV 117
Query: 185 WNIRLK-IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ 243
+K + RGL FLH+ +V++RD K NIL+ S K++DFGLA++ S
Sbjct: 118 PTETIKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSF 172
Query: 244 SHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 284
T V+ T Y APE + D++ G + E+
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 12/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
+FK +LGEG F V E A + + ++ + + E+ + + +V +
Sbjct: 29 EDFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MS 84
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
RL HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 85 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----S 140
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGY 256
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 141 ALEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 197
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 228
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK +LGEG F V E A + + ++ + + E+ + + +V + R
Sbjct: 33 DFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MSR 88
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 144
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYA 257
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 145 LEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYV 201
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 202 SPELLTEKSAXKSSDLWALGCIIYQLVAGL 231
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 23/244 (9%)
Query: 48 SSGDESYPNGQILPTPNLRIFTFVELRAA--TRNFKSDTVLGEGGFGKVFKGWLDEKAPG 105
++G P + TP + FV+ A + +K VLG+G FG+V +K G
Sbjct: 21 AAGTSGGPGDHLHATPGM----FVQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITG 74
Query: 106 KSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQ 165
+ + VI+ +++ ++ + E EV L +L HPN+++L + + LV E
Sbjct: 75 QECAVKVISKRQVKQKTDK--ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 132
Query: 166 KGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG-- 223
G L + + R + A I ++ G+ ++H + ++++RD K N+LL+
Sbjct: 133 GGELFDEIISRKRFSEVDAARIIRQV----LSGITYMHKN--KIVHRDLKPENLLLESKS 186
Query: 224 -SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVE 282
+I DFGL+ S +GT Y APE V G K DV+ GV+L
Sbjct: 187 KDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYI 242
Query: 283 ILTG 286
+L+G
Sbjct: 243 LLSG 246
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 126/298 (42%), Gaps = 36/298 (12%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTV-IAVKKLNSESLQGFEEWQSEVNFLGRLSHP 142
VLG+G +G V+ G + S V IA+K++ + + E+ L H
Sbjct: 28 VVLGKGTYGIVYAG--------RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 79
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N+V+ LG E+ + + E + GSL L + ++ I GL +L
Sbjct: 80 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QILEGLKYL 138
Query: 203 HTSDKQVIYRDFKASNILLDG-SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEY 261
H D Q+++RD K N+L++ S KISDFG +K A + T GT Y APE
Sbjct: 139 H--DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAPEI 194
Query: 262 VATG-HLYVK-SDVYGFGVVLVEILTGLRAL-DTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
+ G Y K +D++ G ++E+ TG + P V K
Sbjct: 195 IDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK------------ 242
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKPK-QPRV 375
+ + P + + LKC E +P R +++ E L+ S +K K QP++
Sbjct: 243 ----VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL-VDEFLKVSSKKKKTQPKL 295
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 23/244 (9%)
Query: 48 SSGDESYPNGQILPTPNLRIFTFVELRAA--TRNFKSDTVLGEGGFGKVFKGWLDEKAPG 105
++G P + TP + FV+ A + +K VLG+G FG+V +K G
Sbjct: 22 AAGTSGGPGDHLHATPGM----FVQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITG 75
Query: 106 KSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQ 165
+ + VI+ +++ ++ + E EV L +L HPN+++L + + LV E
Sbjct: 76 QECAVKVISKRQVKQKTDK--ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 133
Query: 166 KGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG-- 223
G L + + R + A I ++ G+ ++H + ++++RD K N+LL+
Sbjct: 134 GGELFDEIISRKRFSEVDAARIIRQV----LSGITYMHKN--KIVHRDLKPENLLLESKS 187
Query: 224 -SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVE 282
+I DFGL+ S +GT Y APE V G K DV+ GV+L
Sbjct: 188 KDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYI 243
Query: 283 ILTG 286
+L+G
Sbjct: 244 LLSG 247
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 12/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
+FK +LGEG F V E A + + ++ + + E+ + + +V +
Sbjct: 35 EDFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MS 90
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
RL HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 91 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----S 146
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGY 256
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 147 ALEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 203
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 12/211 (5%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
+FK +LGEG F V E A + + ++ + + E+ + + +V +
Sbjct: 32 EDFKFGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MS 87
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
RL HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----S 143
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGY 256
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 144 ALEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 200
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 113 IAVKKLNSESLQG---FEEWQSEVNFLGRLSHPNLVRLLGYCWEDKEL------LLVYEF 163
+AVK L ++ + + ++ E L+HP +V + Y + E +V E+
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEY 114
Query: 164 MQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG 223
+ +L + + G P+ +++ A + L F H + +I+RD K +NI++
Sbjct: 115 VDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQN--GIIHRDVKPANIMISA 168
Query: 224 SYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVE 282
+ K+ DFG+A+ + S + T V+GT Y +PE + +SDVY G VL E
Sbjct: 169 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 228
Query: 283 ILTGLRALDTNRPSG---QHNLVDWIKP 307
+LTG + P QH D I P
Sbjct: 229 VLTGEPPFTGDSPVSVAYQHVREDPIPP 256
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 120/292 (41%), Gaps = 30/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPNL 144
LG G FG+V++G + S +AVK L + E ++ E + + +H N+
Sbjct: 39 LGHGAFGEVYEGQVSGMP--NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLF-GRGASVQP--LAWNIRLKIAIGAARGLAF 201
VR +G + ++ E M G L++ L R QP LA L +A A G +
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
L + I+RD A N LL AKI DFG+A+ AS M +
Sbjct: 157 LE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
PE G K+D + FGV+L EI + L + S Q L
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVL---------------EF 258
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ + + P + ++ +C + +P+ RP+ + LER++ Q P
Sbjct: 259 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII---LERIEYCTQDP 307
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 112/258 (43%), Gaps = 25/258 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ---S 131
A +F V+G+G FGKV AVK L +++ +E + S
Sbjct: 35 AKPSDFHFLKVIGKGSFGKVLLA-------RHKAEEVFYAVKVLQKKAILKKKEEKHIMS 87
Query: 132 EVN-FLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
E N L + HP LV L +L V +++ G L HL ++P A +
Sbjct: 88 ERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAE 147
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRV 250
IA L +LH+ + ++YRD K NILLD ++DFGL K + + T+
Sbjct: 148 IA----SALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTF 199
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDT-NRPSGQHNLVD---WIK 306
GT Y APE + D + G VL E+L GL + N N+++ +K
Sbjct: 200 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK 259
Query: 307 PYLSEKRKFRHIIDARLQ 324
P ++ RH+++ LQ
Sbjct: 260 PNITNSA--RHLLEGLLQ 275
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 32/224 (14%)
Query: 77 TRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNF 135
+ +F+ ++LGEG +G V +G ++A+KK+ F E+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA-------THKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 136 LGRLSHPNLVRLLGYCWED-----KELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
L H N++ + D E+ ++ E MQ R S Q L+ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVISTQMLSDDHIQY 116
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKL---------GPSA 241
R + LH S+ VI+RD K SN+L++ + K+ DFGLA++ P+
Sbjct: 117 FIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 242 SQSHVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEIL 284
QS + V T Y APE + T Y ++ DV+ G +L E+
Sbjct: 175 QQSGMVEFV-ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFLGRLSHPN 143
+GEG +G VFK + ++A+K+ L+ + E+ L L H N
Sbjct: 10 IGEGTYGTVFKA-------KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+VRL DK+L LV+EF + L+ + + P I +GL F H
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGFCH 118
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ + V++RD K N+L++ + K++DFGLA+ + + V T Y P+ +
Sbjct: 119 S--RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVLF 174
Query: 264 TGHLYVKS-DVYGFGVVLVEILTGLRAL 290
LY S D++ G + E+ R L
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 48/241 (19%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
N K ++G G +G V+KG LDE+ +AVK + + Q F + + +
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDERP---------VAVKVFSFANRQNFIN-EKNIYRVPL 63
Query: 139 LSHPNLVRLLGYCWEDK-------ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
+ H N+ R + +++ E LLV E+ GSL +L S+ W ++
Sbjct: 64 MEHDNIARFI--VGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRL 116
Query: 192 AIGAARGLAFLHTS-------DKQVIYRDFKASNILLDGSYTAKISDFGLA------KLG 238
A RGLA+LHT + +RD + N+L+ T ISDFGL+ +L
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLV 176
Query: 239 PSASQSHVTTRVMGTYGYAAPEYVATGHLYVKS--------DVYGFGVVLVEILTGLRAL 290
+ + +GT Y APE V G + ++ D+Y G++ EI +R
Sbjct: 177 RPGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF--MRCT 233
Query: 291 D 291
D
Sbjct: 234 D 234
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
VLG GGFG+VF + KA GK + + K + +G++ E L ++ H
Sbjct: 192 VLGRGGFGEVFACQM--KATGKLYA--CKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRF 246
Query: 145 VRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+ L Y +E K +L LV M G + H++ + GL LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLA---KLGPSASQSHVTTRVMGTYGYAAPE 260
+ +IYRD K N+LLD +ISD GLA K G + ++ + GT G+ APE
Sbjct: 307 Q--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPE 359
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTG 286
+ D + GV L E++
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
VLG GGFG+VF + KA GK + + K + +G++ E L ++ H
Sbjct: 192 VLGRGGFGEVFACQM--KATGKLYA--CKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRF 246
Query: 145 VRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+ L Y +E K +L LV M G + H++ + GL LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLA---KLGPSASQSHVTTRVMGTYGYAAPE 260
+ +IYRD K N+LLD +ISD GLA K G + ++ + GT G+ APE
Sbjct: 307 Q--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPE 359
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTG 286
+ D + GV L E++
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
VLG GGFG+VF + KA GK + + K + +G++ E L ++ H
Sbjct: 192 VLGRGGFGEVFACQM--KATGKLYA--CKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRF 246
Query: 145 VRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+ L Y +E K +L LV M G + H++ + GL LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLA---KLGPSASQSHVTTRVMGTYGYAAPE 260
+ +IYRD K N+LLD +ISD GLA K G + ++ + GT G+ APE
Sbjct: 307 Q--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPE 359
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTG 286
+ D + GV L E++
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 120/292 (41%), Gaps = 30/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPNL 144
LG G FG+V++G + S +AVK L + E ++ E + + +H N+
Sbjct: 65 LGHGAFGEVYEGQVSGMP--NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 122
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLF-GRGASVQP--LAWNIRLKIAIGAARGLAF 201
VR +G + ++ E M G L++ L R QP LA L +A A G +
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
L + I+RD A N LL AKI DFG+A+ AS M +
Sbjct: 183 LE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
PE G K+D + FGV+L EI + L + S Q L
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVL---------------EF 284
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ + + P + ++ +C + +P+ RP+ + LER++ Q P
Sbjct: 285 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII---LERIEYCTQDP 333
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
VLG GGFG+VF + KA GK + + K + +G++ E L ++ H
Sbjct: 192 VLGRGGFGEVFACQM--KATGKLYA--CKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRF 246
Query: 145 VRLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+ L Y +E K +L LV M G + H++ + GL LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLA---KLGPSASQSHVTTRVMGTYGYAAPE 260
+ +IYRD K N+LLD +ISD GLA K G + ++ + GT G+ APE
Sbjct: 307 Q--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPE 359
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTG 286
+ D + GV L E++
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 120/292 (41%), Gaps = 30/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPNL 144
LG G FG+V++G + S +AVK L + E ++ E + + +H N+
Sbjct: 38 LGHGAFGEVYEGQVSGMP--NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLF-GRGASVQP--LAWNIRLKIAIGAARGLAF 201
VR +G + ++ E M G L++ L R QP LA L +A A G +
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
L + I+RD A N LL AKI DFG+A+ AS M +
Sbjct: 156 LE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
PE G K+D + FGV+L EI + L + S Q L
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVL---------------EF 257
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ + + P + ++ +C + +P+ RP+ + LER++ Q P
Sbjct: 258 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII---LERIEYCTQDP 306
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 120/292 (41%), Gaps = 30/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPNL 144
LG G FG+V++G + S +AVK L + E ++ E + + +H N+
Sbjct: 30 LGHGAFGEVYEGQVSGMP--NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 87
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLF-GRGASVQP--LAWNIRLKIAIGAARGLAF 201
VR +G + ++ E M G L++ L R QP LA L +A A G +
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
L + I+RD A N LL AKI DFG+A+ AS M +
Sbjct: 148 LE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
PE G K+D + FGV+L EI + L + S Q L
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVL---------------EF 249
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ + + P + ++ +C + +P+ RP+ + LER++ Q P
Sbjct: 250 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII---LERIEYCTQDP 298
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 120/292 (41%), Gaps = 30/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPNL 144
LG G FG+V++G + S +AVK L + E ++ E + + +H N+
Sbjct: 53 LGHGAFGEVYEGQVSGMP--NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 110
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLF-GRGASVQP--LAWNIRLKIAIGAARGLAF 201
VR +G + ++ E M G L++ L R QP LA L +A A G +
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
L + I+RD A N LL AKI DFG+A+ AS M +
Sbjct: 171 LE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
PE G K+D + FGV+L EI + L + S Q L
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVL---------------EF 272
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ + + P + ++ +C + +P+ RP+ + LER++ Q P
Sbjct: 273 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII---LERIEYCTQDP 321
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
+GEG G V + SG ++AVKK++ Q E +EV + H N+V
Sbjct: 159 IGEGSTGIVCIATV-------RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV 211
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+ EL +V EF++ G+L + + + + +A + + + L+ LH
Sbjct: 212 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA- 265
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR--VMGTYGYAAPEYVA 263
+ VI+RD K+ +ILL K+SDFG + V R ++GT + APE ++
Sbjct: 266 -QGVIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELIS 320
Query: 264 TGHLYVKSDVYGFGVVLVEILTG 286
+ D++ G++++E++ G
Sbjct: 321 RLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 120/292 (41%), Gaps = 30/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPNL 144
LG G FG+V++G + S +AVK L + E ++ E + + +H N+
Sbjct: 39 LGHGAFGEVYEGQVSGMP--NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLF-GRGASVQP--LAWNIRLKIAIGAARGLAF 201
VR +G + ++ E M G L++ L R QP LA L +A A G +
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
L + I+RD A N LL AKI DFG+A+ AS M +
Sbjct: 157 LE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
PE G K+D + FGV+L EI + L + S Q L
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVL---------------EF 258
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ + + P + ++ +C + +P+ RP+ + LER++ Q P
Sbjct: 259 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII---LERIEYCTQDP 307
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 120/292 (41%), Gaps = 30/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPNL 144
LG G FG+V++G + S +AVK L + E ++ E + + +H N+
Sbjct: 38 LGHGAFGEVYEGQVSGMP--NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLF-GRGASVQP--LAWNIRLKIAIGAARGLAF 201
VR +G + ++ E M G L++ L R QP LA L +A A G +
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
L + I+RD A N LL AKI DFG+A+ AS M +
Sbjct: 156 LE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
PE G K+D + FGV+L EI + L + S Q L
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVL---------------EF 257
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ + + P + ++ +C + +P+ RP+ + LER++ Q P
Sbjct: 258 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII---LERIEYCTQDP 306
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 120/292 (41%), Gaps = 30/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPNL 144
LG G FG+V++G + S +AVK L + E ++ E + + +H N+
Sbjct: 45 LGHGAFGEVYEGQVSGMP--NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 102
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLF-GRGASVQP--LAWNIRLKIAIGAARGLAF 201
VR +G + ++ E M G L++ L R QP LA L +A A G +
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
L + I+RD A N LL AKI DFG+A+ AS M +
Sbjct: 163 LE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
PE G K+D + FGV+L EI + L + S Q L
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVL---------------EF 264
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ + + P + ++ +C + +P+ RP+ + LER++ Q P
Sbjct: 265 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII---LERIEYCTQDP 313
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
+K VLG+G FG+V +K G+ + VI+ +++ ++ + E EV L +L
Sbjct: 34 YKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDK--ESLLREVQLLKQL 89
Query: 140 SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
HPN+++L + + LV E G L + + R + A I ++ G+
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV----LSGI 145
Query: 200 AFLHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
++H + ++++RD K N+LL+ +I DFGL+ S +GT Y
Sbjct: 146 TYMHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYY 200
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
APE V G K DV+ GV+L +L+G
Sbjct: 201 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A++K++ Q + + E+ L R H
Sbjct: 33 SYIGEGAYGMVCSAY-------DNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 139
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 140 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 238
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 120/292 (41%), Gaps = 30/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPNL 144
LG G FG+V++G + S +AVK L + E ++ E + + +H N+
Sbjct: 55 LGHGAFGEVYEGQVSGMP--NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 112
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLF-GRGASVQP--LAWNIRLKIAIGAARGLAF 201
VR +G + ++ E M G L++ L R QP LA L +A A G +
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
L + I+RD A N LL AKI DFG+A+ AS M +
Sbjct: 173 LE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
PE G K+D + FGV+L EI + L + S Q L
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVL---------------EF 274
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ + + P + ++ +C + +P+ RP+ + LER++ Q P
Sbjct: 275 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII---LERIEYCTQDP 323
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 120/292 (41%), Gaps = 30/292 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQSEVNFLGRLSHPNL 144
LG G FG+V++G + S +AVK L S Q ++ E + + +H N+
Sbjct: 53 LGHGAFGEVYEGQVSGMP--NDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNI 110
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLF-GRGASVQP--LAWNIRLKIAIGAARGLAF 201
VR +G + ++ E M G L++ L R QP LA L +A A G +
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
L + I+RD A N LL AKI DFG+A+ AS M +
Sbjct: 171 LE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
PE G K+D + FGV+L EI + L + S Q L
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVL---------------EF 272
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ + + P + ++ +C + +P+ RP+ + LER++ Q P
Sbjct: 273 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII---LERIEYCTQDP 321
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
+LG G FG+V K ++ +G +A K + + ++ EE ++E++ + +L H NL
Sbjct: 96 ILGGGRFGQVHKC-------EETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL 148
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
++L +++LV E++ G L + + ++ L + +K R H
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIR-----HM 203
Query: 205 SDKQVIYRDFKASNILL--DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
+++ D K NIL + KI DFGLA+ + V GT + APE V
Sbjct: 204 HQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEVV 260
Query: 263 ATGHLYVKSDVYGFGVVLVEILTGL 287
+ +D++ GV+ +L+GL
Sbjct: 261 NYDFVSFPTDMWSVGVIAYMLLSGL 285
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPN 143
+LGEG FG+V++G G +AVK + +L E++ SE + L HP+
Sbjct: 15 ILGEGFFGEVYEG----VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPH 70
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V+L+G E++ ++ E G L ++L S++ L + ++ + +A+L
Sbjct: 71 IVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYLE 126
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ + ++RD NIL+ K+ DFGL++ + + + +PE +
Sbjct: 127 SIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESIN 183
Query: 264 TGHLYVKSDVYGFGVVLVEILT 285
SDV+ F V + EIL+
Sbjct: 184 FRRFTTASDVWMFAVCMWEILS 205
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
+FK +LGEG F E A + + ++ + + E+ + + +V + R
Sbjct: 31 DFKFGKILGEGSFSTTVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDV--MSR 86
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HP V+L +D++L + + G L ++ G+ + +I
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 142
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYA 257
L +LH K +I+RD K NILL+ +I+DFG AK L P + Q+ V GT Y
Sbjct: 143 LEYLH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYV 199
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTGL 287
+PE + SD++ G ++ +++ GL
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
V+G+G F V + + G+ + ++ V K S E+ + E + L HP++
Sbjct: 31 VIGKGAFSVVRRCI--NRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V LL D L +V+EFM L + R + + + L + H
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH- 147
Query: 205 SDKQVIYRDFKASNILL---DGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGYAAPE 260
D +I+RD K N+LL + S K+ DFG+A +LG S V +GT + APE
Sbjct: 148 -DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL---VAGGRVGTPHFMAPE 203
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTG 286
V DV+G GV+L +L+G
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R ++ V+G G FG V++ L SG ++A+KK+ LQG E+
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQGKAFKNREL 64
Query: 134 NFLGRLSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAW 185
+ +L H N+VRL + + E L LV +++ + + H + R P+ +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY 123
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAK--LGPSAS 242
++L + R LA++H+ + +RD K N+LLD + K+ DFG AK + +
Sbjct: 124 -VKLYM-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 243 QSHVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
S++ +R Y APE + Y S DV+ G VL E+L G + SG L
Sbjct: 180 VSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQL 232
Query: 302 VDWIK 306
V+ IK
Sbjct: 233 VEIIK 237
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPN 143
+LGEG FG+V++G G +AVK + +L E++ SE + L HP+
Sbjct: 31 ILGEGFFGEVYEG----VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPH 86
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V+L+G E++ ++ E G L ++L S++ L + ++ + +A+L
Sbjct: 87 IVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY---SLQICKAMAYLE 142
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ + ++RD NIL+ K+ DFGL++ + + + +PE +
Sbjct: 143 SIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESIN 199
Query: 264 TGHLYVKSDVYGFGVVLVEILT 285
SDV+ F V + EIL+
Sbjct: 200 FRRFTTASDVWMFAVCMWEILS 221
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R ++ V+G G FG V++ L SG ++A+KK+ LQG E+
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQGKAFKNREL 64
Query: 134 NFLGRLSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAW 185
+ +L H N+VRL + + E L LV +++ + + H + R P+ +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY 123
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAK--LGPSAS 242
++L + R LA++H+ + +RD K N+LLD + K+ DFG AK + +
Sbjct: 124 -VKLYM-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 243 QSHVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
S++ +R Y APE + Y S DV+ G VL E+L G + SG L
Sbjct: 180 VSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQL 232
Query: 302 VDWIK 306
V+ IK
Sbjct: 233 VEIIK 237
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
+K VLG+G FG+V +K G+ + VI+ +++ ++ + E EV L +L
Sbjct: 28 YKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDK--ESLLREVQLLKQL 83
Query: 140 SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
HPN+++L + + LV E G L + + R + A I ++ G+
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV----LSGI 139
Query: 200 AFLHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
++H + ++++RD K N+LL+ +I DFGL+ S +GT Y
Sbjct: 140 TYMHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYY 194
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
APE V G K DV+ GV+L +L+G
Sbjct: 195 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 20/221 (9%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL----QGFEEW 129
+ NF+ VLG G +GKVF L K G +G + A+K L ++ + E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVF---LVRKISGHD-TGKLYAMKVLKKATIVQKAKTTEHT 105
Query: 130 QSEVNFLGRLSHPNLVRLLGYCWE-DKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIR 188
++E L + + L Y ++ + +L L+ +++ G L HL R +
Sbjct: 106 RTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH-----E 160
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTT 248
++I +G LA H +IYRD K NILLD + ++DFGL+K A ++
Sbjct: 161 VQIYVGEIV-LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK-EFVADETERAY 218
Query: 249 RVMGTYGYAAPEYV---ATGHLYVKSDVYGFGVVLVEILTG 286
GT Y AP+ V +GH D + GV++ E+LTG
Sbjct: 219 DFCGTIEYMAPDIVRGGDSGHDKA-VDWWSLGVLMYELLTG 258
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
+GEG G V + SG ++AVKK++ Q E +EV + H N+V
Sbjct: 39 IGEGSTGIVCIATV-------RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV 91
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+ EL +V EF++ G+L + + + + +A + + + L+ LH
Sbjct: 92 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA- 145
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR--VMGTYGYAAPEYVA 263
+ VI+RD K+ +ILL K+SDFG + V R ++GT + APE ++
Sbjct: 146 -QGVIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELIS 200
Query: 264 TGHLYVKSDVYGFGVVLVEILTG 286
+ D++ G++++E++ G
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 33 SYIGEGAYGMVCSAY-------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 139
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + + T Y
Sbjct: 140 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 197
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 238
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L R H
Sbjct: 34 SYIGEGAYGMVCSAY-------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 86
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 140
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + + T Y
Sbjct: 141 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 198
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 239
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPN 143
+LGEG FG+V++G G +AVK + +L E++ SE + L HP+
Sbjct: 19 ILGEGFFGEVYEG----VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPH 74
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V+L+G E++ ++ E G L ++L S++ L + ++ + +A+L
Sbjct: 75 IVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY---SLQICKAMAYLE 130
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ + ++RD NIL+ K+ DFGL++ + + + +PE +
Sbjct: 131 SIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESIN 187
Query: 264 TGHLYVKSDVYGFGVVLVEILT 285
SDV+ F V + EIL+
Sbjct: 188 FRRFTTASDVWMFAVCMWEILS 209
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
+GEG G V + SG ++AVKK++ Q E +EV + H N+V
Sbjct: 37 IGEGSTGIVCIATV-------RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV 89
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+ EL +V EF++ G+L + + + + +A + + + L+ LH
Sbjct: 90 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA- 143
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR--VMGTYGYAAPEYVA 263
+ VI+RD K+ +ILL K+SDFG + V R ++GT + APE ++
Sbjct: 144 -QGVIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELIS 198
Query: 264 TGHLYVKSDVYGFGVVLVEILTG 286
+ D++ G++++E++ G
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 123/284 (43%), Gaps = 54/284 (19%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
+G+G FG+VFKG +D + + V+A+K ++ E+ E+ Q E+ L + +
Sbjct: 31 IGKGSFGEVFKG-IDNR------TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
+ G + +L ++ E++ GS + L R LK + +GL +LH+
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEIL---KGLDYLHS 138
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
K I+RD KA+N+LL K++DFG+A G +GT + APE +
Sbjct: 139 EKK--IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 265 GHLYVKSDVYGFGVVLVEILTG---------LRALDTNRPSGQHNLV-DWIKPYLSEKRK 314
K+D++ G+ +E+ G +R L + LV D+ K
Sbjct: 195 SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTK-------S 247
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
F+ IDA CL +P RP+ +E+++
Sbjct: 248 FKEFIDA--------------------CLNKDPSFRPTAKELLK 271
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
+GEG G V + SG ++AVKK++ Q E +EV + H N+V
Sbjct: 82 IGEGSTGIVCIATV-------RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV 134
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+ EL +V EF++ G+L + + + + +A + + + L+ LH
Sbjct: 135 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA- 188
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR--VMGTYGYAAPEYVA 263
+ VI+RD K+ +ILL K+SDFG + V R ++GT + APE ++
Sbjct: 189 -QGVIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELIS 243
Query: 264 TGHLYVKSDVYGFGVVLVEILTG 286
+ D++ G++++E++ G
Sbjct: 244 RLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS---EVNFLGRLSHP 142
+G+G FGKV K+ + + A+K +N + E ++ E+ + L HP
Sbjct: 23 IGKGSFGKVC-------IVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHP 75
Query: 143 NLVRLLGYCWEDKE-LLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
LV L Y ++D+E + +V + + G L HL +V ++L I +A
Sbjct: 76 FLVNL-WYSFQDEEDMFMVVDLLLGGDLRYHL---QQNVHFKEETVKLFIC---ELVMAL 128
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEY 261
+ ++++I+RD K NILLD I+DF +A + P +Q T + GT Y APE
Sbjct: 129 DYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---ITTMAGTKPYMAPEM 185
Query: 262 VAT----GHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRH 317
++ G+ + D + GV E+L G R + +V H
Sbjct: 186 FSSRKGAGYSFA-VDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV--------------H 230
Query: 318 IIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPS 352
+ + YP + ++ L K LE P R S
Sbjct: 231 TFETTVVT-YPSAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 14 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 122
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 15 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G+ +LH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLHG 123
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 234
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 13 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 121
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 122 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 232
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE---EWQSEVNFLGRLSHP 142
LGEG FGKV K + +A+K ++ + L+ + + E+++L L HP
Sbjct: 17 LGEGSFGKV-------KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
++++L ++++V E+ G L +++ + + +I A
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQII------CAIE 122
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
+ ++++RD K N+LLD + KI+DFGL+ + + + G+ YAAPE V
Sbjct: 123 YCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNI---MTDGNFLKTSCGSPNYAAPE-V 178
Query: 263 ATGHLYV--KSDVYGFGVVLVEILTGLRALD 291
G LY + DV+ G+VL +L G D
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 15 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 123
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 234
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 123/295 (41%), Gaps = 42/295 (14%)
Query: 86 LGEGGFGKV--FKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPN 143
LGEGGF V +G D G A+K++ Q EE Q E + +HPN
Sbjct: 37 LGEGGFSYVDLVEGLHD---------GHFYALKRILCHEQQDREEAQREADMHRLFNHPN 87
Query: 144 LVRLLGYCWEDK----ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
++RL+ YC ++ E L+ F ++G+L N + L + L + +G RGL
Sbjct: 88 ILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGL 147
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFG---LAKLGPSASQSHVTTRVMG---- 252
+H K +RD K +NILL + D G A + S+ +T +
Sbjct: 148 EAIHA--KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 253 TYGYAAPE-YVATGHLYV--KSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYL 309
T Y APE + H + ++DV+ G VL ++ G D G ++ ++ L
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SVALAVQNQL 264
Query: 310 SEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQ 364
S + RH + + QL + +P RP + ++ LE LQ
Sbjct: 265 SIPQSPRH--------------SSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 14 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 122
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 15 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 123
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 234
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 14 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 122
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
+GEG G V + SG ++AVKK++ Q E +EV + H N+V
Sbjct: 28 IGEGSTGIVCIATV-------RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV 80
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+ EL +V EF++ G+L + + + + +A + + + L+ LH
Sbjct: 81 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA- 134
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR--VMGTYGYAAPEYVA 263
+ VI+RD K+ +ILL K+SDFG + V R ++GT + APE ++
Sbjct: 135 -QGVIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELIS 189
Query: 264 TGHLYVKSDVYGFGVVLVEILTG 286
+ D++ G++++E++ G
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 14 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 122
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 15 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 123
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 234
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 15 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 123
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 234
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 14 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 122
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 15 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G+ +LH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLHG 123
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 234
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 15 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 123
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 234
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+GGF K ++ + + + +G V+ L + E+ +E+ L +P++V
Sbjct: 50 LGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQK--EKMSTEIAIHKSLDNPHVV 105
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLA-WNIRLKIAIGAARGLAFLHT 204
G+ +D + +V E ++ SL R A +P A + +R I +G+ +LH
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLH- 159
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA- 263
+ +VI+RD K N+ L+ KI DFGLA + T + GT Y APE +
Sbjct: 160 -NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCK 216
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRALDTN 293
GH + + D++ G +L +L G +T+
Sbjct: 217 KGHSF-EVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 123/293 (41%), Gaps = 32/293 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPNL 144
LG G FG+V++G + S +AVK L + E ++ E + + +H N+
Sbjct: 56 LGHGAFGEVYEGQVSGMP--NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 113
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLF-GRGASVQP--LAWNIRLKIAIGAARGLAF 201
VR +G + ++ E M G L++ L R QP LA L +A A G +
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
L + I+RD A N LL AKI DFG+A+ A M +
Sbjct: 174 LE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE-KRKFRH 317
PE G K+D + FGV+L EI + + ++ PY S+ ++
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYM-PYPSKSNQEVLE 274
Query: 318 IIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ + + P + ++ +C + +P+ RP+ + LER++ Q P
Sbjct: 275 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII---LERIEYCTQDP 324
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 14 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 122
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 15 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 123
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 234
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL-QGFEEWQSEVNFLGRLSHPNL 144
+G GGF KV K +G ++A+K ++ +L ++E+ L L H ++
Sbjct: 18 IGTGGFAKV-------KLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHI 70
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
+L ++ +V E+ G L +++ + + + +I +A++H+
Sbjct: 71 CQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIV----SAVAYVHS 126
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV-A 263
+ +RD K N+L D + K+ DFGL P ++ + G+ YAAPE +
Sbjct: 127 --QGYAHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQG 183
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRALDTNRP--------SGQHNLVDWIKP 307
+L ++DV+ G++L ++ G D + G++++ W+ P
Sbjct: 184 KSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSP 235
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
+GEG G V + SG ++AVKK++ Q E +EV + H N+V
Sbjct: 32 IGEGSTGIVCIATV-------RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV 84
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+ EL +V EF++ G+L + + + + +A + + + L+ LH
Sbjct: 85 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA- 138
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR--VMGTYGYAAPEYVA 263
+ VI+RD K+ +ILL K+SDFG + V R ++GT + APE ++
Sbjct: 139 -QGVIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELIS 193
Query: 264 TGHLYVKSDVYGFGVVLVEILTG 286
+ D++ G++++E++ G
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 85 VLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPN 143
+GEG FG V +G ++ + P + + + K S+S++ E++ E + + HP+
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVA--IKTCKNCTSDSVR--EKFLQEALTMRQFDHPH 72
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V+L+G E+ + ++ E G L + L R S+ LA I + A LA+L
Sbjct: 73 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLD-LASLILYAYQLSTA--LAYLE 128
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ K+ ++RD A N+L+ + K+ DFGL++ ++ + + + APE +
Sbjct: 129 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL-PIKWMAPESIN 185
Query: 264 TGHLYVKSDVYGFGVVLVEIL 284
SDV+ FGV + EIL
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 14 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 122
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE-YSDWKEKKTYLNPWKKI 233
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L H
Sbjct: 31 SYIGEGAYGMVCSAY-------DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHE 83
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 137
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 138 GLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 236
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 14 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G+ +LH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLHG 122
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 42/239 (17%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS-- 131
R R ++ LG+G +G V+K +D + +G V+AVKK+ ++ Q + Q
Sbjct: 5 RHVLRKYELVKKLGKGAYGIVWKS-IDRR------TGEVVAVKKI-FDAFQNSTDAQRTF 56
Query: 132 -EVNFLGRLS-HPNLVRLLGYCW--EDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNI 187
E+ L LS H N+V LL D+++ LV+++M+ + H R ++P+
Sbjct: 57 REIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET---DLHAVIRANILEPVH--- 110
Query: 188 RLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK----------- 236
+ + + + +LH+ +++RD K SNILL+ K++DFGL++
Sbjct: 111 KQYVVYQLIKVIKYLHSG--GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNN 168
Query: 237 --LGPSASQSH------VTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
L + + + + T + T Y APE + Y K D++ G +L EIL G
Sbjct: 169 IPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 14 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 122
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 123/293 (41%), Gaps = 32/293 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE-EWQSEVNFLGRLSHPNL 144
LG G FG+V++G + S +AVK L + E ++ E + + +H N+
Sbjct: 79 LGHGAFGEVYEGQVSGMP--NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLF-GRGASVQP--LAWNIRLKIAIGAARGLAF 201
VR +G + ++ E M G L++ L R QP LA L +A A G +
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
L + I+RD A N LL AKI DFG+A+ A M +
Sbjct: 197 LE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSE-KRKFRH 317
PE G K+D + FGV+L EI + + ++ PY S+ ++
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYM-PYPSKSNQEVLE 297
Query: 318 IIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQASDQKP 370
+ + + P + ++ +C + +P+ RP+ + LER++ Q P
Sbjct: 298 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII---LERIEYCTQDP 347
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 14 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 122
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 131/329 (39%), Gaps = 65/329 (19%)
Query: 72 ELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS 131
ELR R VL EGGF V++ GSG A+K+L S +
Sbjct: 27 ELRLRVRR-----VLAEGGFAFVYEAQ-------DVGSGREYALKRLLSNEEEKNRAIIQ 74
Query: 132 EVNFLGRLS-HPNLVRLLGYCWEDKE--------LLLVYEFMQKGSLENHLFGRGASVQP 182
EV F+ +LS HPN+V+ KE LL+ E KG L L + S P
Sbjct: 75 EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC-KGQLVEFL-KKMESRGP 132
Query: 183 LAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGP--- 239
L+ + LKI R + +H +I+RD K N+LL T K+ DFG A
Sbjct: 133 LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYP 192
Query: 240 ----SASQSHVTTRVM---GTYGYAAPEYV---ATGHLYVKSDVYGFGVVLVEILTGLRA 289
SA + + + T Y PE + + + K D++ G +L L R
Sbjct: 193 DYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY--LLCFR- 249
Query: 290 LDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQY---PYKAAYQIAQLSLKC-LEA 345
QH D K + + G+Y P+ Y + ++ L+
Sbjct: 250 --------QHPFEDGAKLRI-------------VNGKYSIPPHDTQYTVFHSLIRAMLQV 288
Query: 346 EPKHRPSMREVVETLERLQAS-DQKPKQP 373
P+ R S+ EVV L+ + A+ + PK P
Sbjct: 289 NPEERLSIAEVVHQLQEIAAARNVNPKSP 317
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 61 PTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS 120
P +L LR F+ ++G G +G+V+KG +G + A+K ++
Sbjct: 7 PARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG-------RHVKTGQLAAIKVMDV 59
Query: 121 ESLQGFEEWQSEVNFLGRLSH-PNLVRLLGYCWE------DKELLLVYEFMQKGSLENHL 173
+ EE + E+N L + SH N+ G + D +L LV EF GS+ + +
Sbjct: 60 TGDEE-EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI 118
Query: 174 FGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFG 233
+ W + I RGL+ LH +VI+RD K N+LL + K+ DFG
Sbjct: 119 KNTKGNTLKEEWIAYICREI--LRGLSHLHQH--KVIHRDIKGQNVLLTENAEVKLVDFG 174
Query: 234 L-AKLGPSASQSHVTTRVMGTYGYAAPEYVATGH-----LYVKSDVYGFGVVLVEILTG 286
+ A+L + + + +GT + APE +A KSD++ G+ +E+ G
Sbjct: 175 VSAQLDRTVGRRNT---FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 32/228 (14%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF-EEWQSEVNFLGRLSHP 142
+ +GEG +G V + + + +A+KK++ Q + + E+ L H
Sbjct: 31 SYIGEGAYGMVCSAY-------DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHE 83
Query: 143 NLVRLLGYC-----WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
N++ + + K++ +V + M E L+ + Q L+ + R
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLY-KLLKTQHLSNDHICYFLYQILR 137
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLG-PSASQSHVTTRVMGTYGY 256
GL ++H+++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y
Sbjct: 138 GLKYIHSAN--VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRP--SGQHNL 301
APE + Y KS D++ G +L E+L +NRP G+H L
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 236
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG +G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 14 LGEGAYGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 122
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R ++ V+G G FG V++ L SG ++A+KK+ LQG E+
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQGKAFKNREL 64
Query: 134 NFLGRLSHPNLVRLLGYCWEDKE--------LLLVYEFMQKGSLENHLFGRGASVQPLAW 185
+ +L H N+VRL + + E L+L Y + H + R P+ +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH-YSRAKQTLPVIY 123
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQS 244
++L + R LA++H+ + +RD K N+LLD + K+ DFG AK +
Sbjct: 124 -VKLYM-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRG 176
Query: 245 HVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVD 303
+ + Y APE + Y S DV+ G VL E+L G + SG LV+
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVE 234
Query: 304 WIK 306
IK
Sbjct: 235 IIK 237
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 85 VLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPN 143
+GEG FG V +G ++ + P + + + K S+S++ E++ E + + HP+
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVA--IKTCKNCTSDSVR--EKFLQEALTMRQFDHPH 72
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V+L+G E+ + ++ E G L + L R S+ LA I + A LA+L
Sbjct: 73 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLD-LASLILYAYQLSTA--LAYLE 128
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ K+ ++RD A N+L+ + K+ DFGL++ ++ + + + APE +
Sbjct: 129 S--KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESIN 185
Query: 264 TGHLYVKSDVYGFGVVLVEIL 284
SDV+ FGV + EIL
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLG 137
+++ + +G G +G V + SG IAVKKL+ +S+ + E+ L
Sbjct: 53 YQTLSPVGSGAYGSVCSSY-------DVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLK 105
Query: 138 RLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAI 193
+ H N++ LL L E L HL G Q L + +
Sbjct: 106 HMKHENVIGLLDVFTPATSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 161
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
RGL ++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR
Sbjct: 162 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 215
Query: 254 YGYAAPEYVAT-GHLYVKSDVYGFGVVLVEILTG 286
Y APE + H + D++ G ++ E+LTG
Sbjct: 216 -WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 85 VLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPN 143
+GEG FG V +G ++ + P + + + K S+S++ E++ E + + HP+
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVA--IKTCKNCTSDSVR--EKFLQEALTMRQFDHPH 452
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V+L+G E+ + ++ E G L + L R S+ LA I + A LA+L
Sbjct: 453 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLD-LASLILYAYQLSTA--LAYLE 508
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ K+ ++RD A N+L+ + K+ DFGL++ ++ + + + APE +
Sbjct: 509 S--KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESIN 565
Query: 264 TGHLYVKSDVYGFGVVLVEIL 284
SDV+ FGV + EIL
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL 586
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEE-WQSEVNFLGR 138
F+ LG G F +V +EKA GK + AVK + ++L+G E ++E+ L +
Sbjct: 24 FEFKETLGTGAFSEVVLA--EEKATGK-----LFAVKCIPKKALKGKESSIENEIAVLRK 76
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
+ H N+V L L LV + + G L + + +G + A + ++
Sbjct: 77 IKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVL----DA 132
Query: 199 LAFLHTSDKQVIYRDFKASNILL---DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYG 255
+ +LH +++RD K N+L D ISDFGL+K+ + V + GT G
Sbjct: 133 VYYLHRMG--IVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPG 187
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
Y APE +A D + GV+ +L G
Sbjct: 188 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 35/240 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
++ V+G G FG V++ L SG ++A+KK+ LQ E+ + +
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRK 103
Query: 139 LSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAWNIRLK 190
L H N+VRL + + E L LV +++ + + H + R P+ + ++L
Sbjct: 104 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY-VKLY 161
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAK--LGPSASQSHVT 247
+ R LA++H+ + +RD K N+LLD + K+ DFG AK + + S++
Sbjct: 162 M-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 218
Query: 248 TRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIK 306
+R Y APE + Y S DV+ G VL E+L G + SG LV+ IK
Sbjct: 219 SRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 271
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 35/240 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
++ V+G G FG V++ L SG ++A+KK+ LQ E+ + +
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRK 105
Query: 139 LSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAWNIRLK 190
L H N+VRL + + E L LV +++ + + H + R P+ + ++L
Sbjct: 106 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY-VKLY 163
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAK--LGPSASQSHVT 247
+ R LA++H+ + +RD K N+LLD + K+ DFG AK + + S++
Sbjct: 164 M-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 220
Query: 248 TRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIK 306
+R Y APE + Y S DV+ G VL E+L G + SG LV+ IK
Sbjct: 221 SRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 273
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 85 VLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPN 143
+GEG FG V +G ++ + P + + + K S+S++ E++ E + + HP+
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVA--IKTCKNCTSDSVR--EKFLQEALTMRQFDHPH 72
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V+L+G E+ + ++ E G L + L R S+ LA I + A LA+L
Sbjct: 73 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLD-LASLILYAYQLSTA--LAYLE 128
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ K+ ++RD A N+L+ + K+ DFGL++ ++ + + + APE +
Sbjct: 129 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESIN 185
Query: 264 TGHLYVKSDVYGFGVVLVEIL 284
SDV+ FGV + EIL
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 35/240 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
++ V+G G FG V++ L SG ++A+KK+ LQ E+ + +
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRK 97
Query: 139 LSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAWNIRLK 190
L H N+VRL + + E L LV +++ + + H + R P+ + ++L
Sbjct: 98 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY-VKLY 155
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAK--LGPSASQSHVT 247
+ R LA++H+ + +RD K N+LLD + K+ DFG AK + + S++
Sbjct: 156 M-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 212
Query: 248 TRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIK 306
+R Y APE + Y S DV+ G VL E+L G + SG LV+ IK
Sbjct: 213 SRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 265
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 35/245 (14%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R ++ V+G G FG V++ L SG ++A+KK+ LQ E+
Sbjct: 29 RPQEVSYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNREL 77
Query: 134 NFLGRLSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAW 185
+ +L H N+VRL + + E L LV +++ + + H + R P+ +
Sbjct: 78 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY 136
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAK--LGPSAS 242
++L + R LA++H+ + +RD K N+LLD + K+ DFG AK + +
Sbjct: 137 -VKLYM-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 192
Query: 243 QSHVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
S++ +R Y APE + Y S DV+ G VL E+L G + SG L
Sbjct: 193 VSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQL 245
Query: 302 VDWIK 306
V+ IK
Sbjct: 246 VEIIK 250
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 35/245 (14%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R ++ V+G G FG V++ L SG ++A+KK+ LQ E+
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNREL 64
Query: 134 NFLGRLSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAW 185
+ +L H N+VRL + + E L LV +++ + + H + R P+ +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY 123
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAK--LGPSAS 242
++L + R LA++H+ + +RD K N+LLD + K+ DFG AK + +
Sbjct: 124 -VKLYM-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 243 QSHVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
S++ +R Y APE + Y S DV+ G VL E+L G + SG L
Sbjct: 180 VSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQL 232
Query: 302 VDWIK 306
V+ IK
Sbjct: 233 VEIIK 237
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 35/240 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
++ V+G G FG V++ L + SG ++A+KK+ LQ E+ + +
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCD-------SGELVAIKKV----LQDKRFKNRELQIMRK 107
Query: 139 LSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAWNIRLK 190
L H N+VRL + + E L LV +++ + + H + R P+ + ++L
Sbjct: 108 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY-VKLY 165
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAK--LGPSASQSHVT 247
+ R LA++H+ + +RD K N+LLD + K+ DFG AK + + S++
Sbjct: 166 M-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 222
Query: 248 TRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIK 306
+R Y APE + Y S DV+ G VL E+L G + SG LV+ IK
Sbjct: 223 SRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 275
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 35 IGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 88 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAP 196
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKK--LNSESLQGFEEWQSEVNFLGRLSHPN 143
+GEG +G VFK E + ++A+K+ L+ + E+ L L H N
Sbjct: 10 IGEGTYGTVFKAKNRE-------THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+VRL DK+L LV+EF + L+ + + P I +GL F H
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGFCH 118
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ + V++RD K N+L++ + K+++FGLA+ + + V T Y P+ +
Sbjct: 119 S--RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVLF 174
Query: 264 TGHLYVKS-DVYGFGVVLVEILTGLRAL 290
LY S D++ G + E+ R L
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 143/317 (45%), Gaps = 47/317 (14%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNS-ESLQGFEEWQS 131
R R +G+G FG+V++G W E+ +AVK +S E F E +
Sbjct: 38 RTIARTIVLQESIGKGRFGEVWRGKWRGEE----------VAVKIFSSREERSWFRE--A 85
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDK----ELLLVYEFMQKGSLENHLFGRGASVQPLAWNI 187
E+ L H N++ + +D +L LV ++ + GSL ++L +V+ +
Sbjct: 86 EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM---- 141
Query: 188 RLKIAIGAARGLAFLH-----TSDKQVI-YRDFKASNILLDGSYTAKISDFGLAKLGPSA 241
+K+A+ A GLA LH T K I +RD K+ NIL+ + T I+D GLA SA
Sbjct: 142 -IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 200
Query: 242 SQS--HVTTRVMGTYGYAAPEY----VATGHL--YVKSDVYGFGVVLVEIL--TGLRALD 291
+ + +GT Y APE + H + ++D+Y G+V EI + +
Sbjct: 201 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 260
Query: 292 TNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYK-----AAYQIAQLSLKCLEAE 346
+ ++LV P + E RK + + +L+ P + A +A++ +C A
Sbjct: 261 EDYQLPYYDLVP-SDPSVEEMRKV--VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 317
Query: 347 PKHRPSMREVVETLERL 363
R + + +TL +L
Sbjct: 318 GAARLTALRIKKTLSQL 334
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 36 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 89 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 197
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
+K VLG+G FG+V +K G+ + VI+ +++ ++ + E EV L +L
Sbjct: 28 YKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDK--ESLLREVQLLKQL 83
Query: 140 SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
HPN+ +L + + LV E G L + + R + A I ++ G+
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV----LSGI 139
Query: 200 AFLHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+ H + ++++RD K N+LL+ +I DFGL+ S +GT Y
Sbjct: 140 TYXHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKXKDKIGTAYY 194
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
APE V G K DV+ GV+L +L+G
Sbjct: 195 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 35/240 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
++ V+G G FG V++ L + SG ++A+KK+ LQ E+ + +
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCD-------SGELVAIKKV----LQDKRFKNRELQIMRK 148
Query: 139 LSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAWNIRLK 190
L H N+VRL + + E L LV +++ + + H + R P+ + ++L
Sbjct: 149 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY-VKLY 206
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAK--LGPSASQSHVT 247
+ R LA++H+ + +RD K N+LLD + K+ DFG AK + + S++
Sbjct: 207 M-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 263
Query: 248 TRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIK 306
+R Y APE + Y S DV+ G VL E+L G + SG LV+ IK
Sbjct: 264 SRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 316
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 85 VLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPN 143
+GEG FG V +G ++ + P + + + K S+S++ E++ E + + HP+
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVA--IKTCKNCTSDSVR--EKFLQEALTMRQFDHPH 452
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V+L+G E+ + ++ E G L + L R S+ LA I + A LA+L
Sbjct: 453 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLD-LASLILYAYQLSTA--LAYLE 508
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ K+ ++RD A N+L+ + K+ DFGL++ ++ + + + APE +
Sbjct: 509 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESIN 565
Query: 264 TGHLYVKSDVYGFGVVLVEIL 284
SDV+ FGV + EIL
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL 586
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 103/239 (43%), Gaps = 42/239 (17%)
Query: 73 LRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSE 132
LR A+ +F+ VLG+G FG+V K + A+KK+ + SE
Sbjct: 2 LRYAS-DFEEIAVLGQGAFGQVVKA-------RNALDSRYYAIKKIRHTE-EKLSTILSE 52
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKE-------------LLLVYEFMQKGSLENHLFGRGAS 179
V L L+H +VR E + L + E+ + G+L + + +
Sbjct: 53 VMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLN 112
Query: 180 VQ-PLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-- 236
Q W + +I L+++H+ + +I+RD K NI +D S KI DFGLAK
Sbjct: 113 QQRDEYWRLFRQIL----EALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 237 -----LGPSASQ-----SHVTTRVMGTYGYAAPEYV-ATGHLYVKSDVYGFGVVLVEIL 284
+ SQ S T +GT Y A E + TGH K D+Y G++ E++
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 143/317 (45%), Gaps = 47/317 (14%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNS-ESLQGFEEWQS 131
R R +G+G FG+V++G W E+ +AVK +S E F E +
Sbjct: 25 RTIARTIVLQESIGKGRFGEVWRGKWRGEE----------VAVKIFSSREERSWFRE--A 72
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDK----ELLLVYEFMQKGSLENHLFGRGASVQPLAWNI 187
E+ L H N++ + +D +L LV ++ + GSL ++L +V+ +
Sbjct: 73 EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM---- 128
Query: 188 RLKIAIGAARGLAFLH-----TSDKQVI-YRDFKASNILLDGSYTAKISDFGLAKLGPSA 241
+K+A+ A GLA LH T K I +RD K+ NIL+ + T I+D GLA SA
Sbjct: 129 -IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 187
Query: 242 SQS--HVTTRVMGTYGYAAPEY----VATGHL--YVKSDVYGFGVVLVEIL--TGLRALD 291
+ + +GT Y APE + H + ++D+Y G+V EI + +
Sbjct: 188 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 247
Query: 292 TNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYK-----AAYQIAQLSLKCLEAE 346
+ ++LV P + E RK + + +L+ P + A +A++ +C A
Sbjct: 248 EDYQLPYYDLVP-SDPSVEEMRKV--VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 304
Query: 347 PKHRPSMREVVETLERL 363
R + + +TL +L
Sbjct: 305 GAARLTALRIKKTLSQL 321
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 35/240 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
++ V+G G FG V++ L SG ++A+KK+ LQ E+ + +
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRK 74
Query: 139 LSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAWNIRLK 190
L H N+VRL + + E L LV +++ + + H + R P+ + ++L
Sbjct: 75 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY-VKLY 132
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAK--LGPSASQSHVT 247
+ R LA++H+ + +RD K N+LLD + K+ DFG AK + + S++
Sbjct: 133 M-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 189
Query: 248 TRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIK 306
+R Y APE + Y S DV+ G VL E+L G + SG LV+ IK
Sbjct: 190 SRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 242
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 35 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 88 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAP 196
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 37 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 90 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAP 198
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 77 TRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFL 136
+ N+ LG+G F V + K G + +I KKL++ Q E E
Sbjct: 4 SDNYDVKEELGKGAFSVVRR--CVHKTTGLEFAAKIINTKKLSARDFQKLER---EARIC 58
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
+L HPN+VRL E+ LV++ + G L + R + A + +I
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI----L 114
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGS---YTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+A+ H++ +++R+ K N+LL K++DFGLA + S GT
Sbjct: 115 ESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGT 169
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GY +PE + D++ GV+L +L G
Sbjct: 170 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 85 VLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPN 143
+GEG FG V +G ++ + P + + + K S+S++ E++ E + + HP+
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVA--IKTCKNCTSDSVR--EKFLQEALTMRQFDHPH 72
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V+L+G E+ + ++ E G L + L R S+ LA I + A LA+L
Sbjct: 73 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLD-LASLILYAYQLSTA--LAYLE 128
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ K+ ++RD A N+L+ + K+ DFGL++ ++ + + + APE +
Sbjct: 129 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESIN 185
Query: 264 TGHLYVKSDVYGFGVVLVEIL 284
SDV+ FGV + EIL
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 37 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 90 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAP 198
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 37 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 90 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAP 198
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 35 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 88 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 196
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 29 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 82 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 137
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 138 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 190
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+GGF K ++ + + + +G V+ L + E+ +E+ L +P++V
Sbjct: 50 LGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQK--EKMSTEIAIHKSLDNPHVV 105
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLA-WNIRLKIAIGAARGLAFLHT 204
G+ +D + +V E ++ SL R A +P A + +R I +G+ +LH
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLH- 159
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ +VI+RD K N+ L+ KI DFGLA K+ + + GT Y APE +
Sbjct: 160 -NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKX---LCGTPNYIAPEVLC 215
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRALDTN 293
+ D++ G +L +L G +T+
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG V + + E+A +G A K + + E + E+ + L HP LV
Sbjct: 59 LGTGAFGVVHR--VTERA-----TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLV 111
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASV-QPLAWNIRLKIAIGAARGLAFLHT 204
L +D E++++YEFM G LF + A ++ + ++ +GL +H
Sbjct: 112 NLHDAFEDDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH- 166
Query: 205 SDKQVIYRDFKASNILLDG--SYTAKISDFGL-AKLGPSASQSHVTTRVMGTYGYAAPEY 261
+ ++ D K NI+ S K+ DFGL A L P S VTT GT +AAPE
Sbjct: 167 -ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK-VTT---GTAEFAAPEV 221
Query: 262 VATGHLYVKSDVYGFGVVLVEILTGL 287
+ +D++ GV+ +L+GL
Sbjct: 222 AEGKPVGYYTDMWSVGVLSYILLSGL 247
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 77 TRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFL 136
+ N+ LG+G F V + K G + +I KKL++ Q E E
Sbjct: 5 SDNYDVKEELGKGAFSVVRR--CVHKTTGLEFAAKIINTKKLSARDFQKLER---EARIC 59
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
+L HPN+VRL E+ LV++ + G L + R + A + +I
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI----L 115
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGS---YTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+A+ H++ +++R+ K N+LL K++DFGLA + S GT
Sbjct: 116 ESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGT 170
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GY +PE + D++ GV+L +L G
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 35 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 88 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 196
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 36 VGSGAYGSVCAAF-------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 89 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 197
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 85 VLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPN 143
+GEG FG V +G ++ + P + + + K S+S++ E++ E + + HP+
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVA--IKTCKNCTSDSVR--EKFLQEALTMRQFDHPH 69
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V+L+G E+ + ++ E G L + L R S+ LA I + A LA+L
Sbjct: 70 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLD-LASLILYAYQLSTA--LAYLE 125
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ K+ ++RD A N+L+ + K+ DFGL++ ++ + + + APE +
Sbjct: 126 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESIN 182
Query: 264 TGHLYVKSDVYGFGVVLVEIL 284
SDV+ FGV + EIL
Sbjct: 183 FRRFTSASDVWMFGVCMWEIL 203
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 37 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 90 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 198
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 139/304 (45%), Gaps = 45/304 (14%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS-ESLQGFEEWQSEVNFLGRLSHPNL 144
+G+G FG+V++G G +AVK +S E F E +E+ L H N+
Sbjct: 12 IGKGRFGEVWRG---------KWRGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENI 60
Query: 145 VRLLGYCWEDK----ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
+ + +D +L LV ++ + GSL ++L +V+ + +K+A+ A GLA
Sbjct: 61 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLA 115
Query: 201 FLH-----TSDKQVI-YRDFKASNILLDGSYTAKISDFGLAKLGPSASQS--HVTTRVMG 252
LH T K I +RD K+ NIL+ + T I+D GLA SA+ + +G
Sbjct: 116 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 175
Query: 253 TYGYAAPEY----VATGHL--YVKSDVYGFGVVLVEIL--TGLRALDTNRPSGQHNLVDW 304
T Y APE + H + ++D+Y G+V EI + + + ++LV
Sbjct: 176 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP- 234
Query: 305 IKPYLSEKRKFRHIIDARLQGQYPYK-----AAYQIAQLSLKCLEAEPKHRPSMREVVET 359
P + E RK + + +L+ P + A +A++ +C A R + + +T
Sbjct: 235 SDPSVEEMRKV--VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 292
Query: 360 LERL 363
L +L
Sbjct: 293 LSQL 296
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 32 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 85 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 193
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 85 VLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPN 143
+GEG FG V +G ++ + P + + + K S+S++ E++ E + + HP+
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVA--IKTCKNCTSDSVR--EKFLQEALTMRQFDHPH 75
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V+L+G E+ + ++ E G L + L R S+ LA I + A LA+L
Sbjct: 76 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLD-LASLILYAYQLSTA--LAYLE 131
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ K+ ++RD A N+L+ + K+ DFGL++ ++ + + + APE +
Sbjct: 132 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESIN 188
Query: 264 TGHLYVKSDVYGFGVVLVEIL 284
SDV+ FGV + EIL
Sbjct: 189 FRRFTSASDVWMFGVCMWEIL 209
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 85 VLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPN 143
+GEG FG V +G ++ + P + + + K S+S++ E++ E + + HP+
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVA--IKTCKNCTSDSVR--EKFLQEALTMRQFDHPH 100
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V+L+G E+ + ++ E G L + L R S+ LA I + A LA+L
Sbjct: 101 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLD-LASLILYAYQLSTA--LAYLE 156
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ K+ ++RD A N+L+ + K+ DFGL++ ++ + + + APE +
Sbjct: 157 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESIN 213
Query: 264 TGHLYVKSDVYGFGVVLVEIL 284
SDV+ FGV + EIL
Sbjct: 214 FRRFTSASDVWMFGVCMWEIL 234
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+GGF K ++ + + + +G V+ L + E+ +E+ L +P++V
Sbjct: 50 LGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQK--EKMSTEIAIHKSLDNPHVV 105
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLA-WNIRLKIAIGAARGLAFLHT 204
G+ +D + +V E ++ SL R A +P A + +R I +G+ +LH
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLH- 159
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ +VI+RD K N+ L+ KI DFGLA K+ + + GT Y APE +
Sbjct: 160 -NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KDLCGTPNYIAPEVLC 215
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRALDTN 293
+ D++ G +L +L G +T+
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 85 VLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPN 143
+GEG FG V +G ++ + P + + + K S+S++ E++ E + + HP+
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVA--IKTCKNCTSDSVR--EKFLQEALTMRQFDHPH 74
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V+L+G E+ + ++ E G L + L R S+ LA I + A LA+L
Sbjct: 75 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLD-LASLILYAYQLSTA--LAYLE 130
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ K+ ++RD A N+L+ + K+ DFGL++ ++ + + + APE +
Sbjct: 131 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESIN 187
Query: 264 TGHLYVKSDVYGFGVVLVEIL 284
SDV+ FGV + EIL
Sbjct: 188 FRRFTSASDVWMFGVCMWEIL 208
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 20/220 (9%)
Query: 73 LRAATR---NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEW 129
+ A+T+ N+ LG+G F V + K G + +I KKL++ Q E
Sbjct: 21 MNASTKFSDNYDVKEELGKGAFSVVRR--CVHKTTGLEFAAKIINTKKLSARDFQKLER- 77
Query: 130 QSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRL 189
E +L HPN+VRL E+ LV++ + G L + R + A +
Sbjct: 78 --EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ 135
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGS---YTAKISDFGLAKLGPSASQSHV 246
+I +A+ H++ +++R+ K N+LL K++DFGLA + S
Sbjct: 136 QI----LESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEA 186
Query: 247 TTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GT GY +PE + D++ GV+L +L G
Sbjct: 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 18/234 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQGFEEWQSEVNFLGRLSHPNL 144
LGEG G+V + + +AVK ++ + ++ E + E+ L+H N+
Sbjct: 14 LGEGAAGEV-------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V+ G+ E L E+ G L + + +P A ++ G + +LH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG----VVYLHG 122
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +RD K N+LLD KISDFGLA + ++ + ++ GT Y APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 265 GHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW--IKPYLSEKRKF 315
+ + DV+ G+VL +L G D S Q DW K YL+ +K
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKI 233
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 32 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 85 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 193
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 32 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 85 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 193
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 111/240 (46%), Gaps = 35/240 (14%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
++ V+G G FG V++ L SG ++A+KK+ LQ E+ + +
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRK 103
Query: 139 LSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAWNIRLK 190
L H N+VRL + + E L LV +++ + + H + R P+ + ++L
Sbjct: 104 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY-VKLY 161
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAK--LGPSASQSHVT 247
+ R LA++H+ + +RD K N+LLD + K+ DFG AK + + S +
Sbjct: 162 M-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 218
Query: 248 TRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIK 306
+R Y APE + Y S DV+ G VL E+L G + SG LV+ IK
Sbjct: 219 SRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 271
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 49 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 102 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 158 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 210
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 115/279 (41%), Gaps = 34/279 (12%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTV-IAVKKLNSESLQGFEEWQSEVNFLGRLSHP 142
VLG+G +G V+ G + S V IA+K++ + + E+ L H
Sbjct: 14 VVLGKGTYGIVYAG--------RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 65
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N+V+ LG E+ + + E + GSL L + ++ I GL +L
Sbjct: 66 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QILEGLKYL 124
Query: 203 HTSDKQVIYRDFKASNILLDG-SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEY 261
H D Q+++RD K N+L++ S KISDFG +K A + T GT Y APE
Sbjct: 125 H--DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAPEI 180
Query: 262 VATG-HLYVK-SDVYGFGVVLVEILTGLRAL-DTNRPSGQHNLVDWIKPYLSEKRKFRHI 318
+ G Y K +D++ G ++E+ TG + P V K
Sbjct: 181 IDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK------------ 228
Query: 319 IDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVV 357
+ + P + + LKC E +P R +++
Sbjct: 229 ----VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 263
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 42 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 95 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 203
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 59 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 111
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK A T +
Sbjct: 172 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA-----TWTLC 220
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 36 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 89 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 197
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 123/281 (43%), Gaps = 33/281 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+GGF K F+ A K I K L + Q E+ E++ L+H ++V
Sbjct: 49 LGKGGFAKCFE---ISDADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQHVV 104
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
G+ ++ + +V E ++ SL R A +P A +I +G +LH +
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN 160
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGYAAPEYVA- 263
+VI+RD K N+ L+ KI DFGLA K+ + V + GT Y APE ++
Sbjct: 161 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSK 215
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRALDTNR--------PSGQHNLVDWIKP-------- 307
GH + + DV+ G ++ +L G +T+ ++++ I P
Sbjct: 216 KGHSF-EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 274
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
L R I+ L ++ + + Y A+L + CL P+
Sbjct: 275 MLQTDPTARPTINELLNDEF-FTSGYIPARLPITCLTIPPR 314
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 27 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 80 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 136 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 188
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 123/281 (43%), Gaps = 33/281 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+GGF K F+ A K I K L + Q E+ E++ L+H ++V
Sbjct: 47 LGKGGFAKCFE---ISDADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQHVV 102
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
G+ ++ + +V E ++ SL R A +P A +I +G +LH +
Sbjct: 103 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN 158
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGYAAPEYVA- 263
+VI+RD K N+ L+ KI DFGLA K+ + V + GT Y APE ++
Sbjct: 159 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSK 213
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRALDTNR--------PSGQHNLVDWIKP-------- 307
GH + + DV+ G ++ +L G +T+ ++++ I P
Sbjct: 214 KGHSF-EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 272
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
L R I+ L ++ + + Y A+L + CL P+
Sbjct: 273 MLQTDPTARPTINELLNDEF-FTSGYIPARLPITCLTIPPR 312
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 50 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 103 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 211
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+GGF K ++ + + + +G V+ L + E+ +E+ L +P++V
Sbjct: 34 LGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQK--EKMSTEIAIHKSLDNPHVV 89
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLA-WNIRLKIAIGAARGLAFLHT 204
G+ +D + +V E ++ SL R A +P A + +R I +G+ +LH
Sbjct: 90 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHN 144
Query: 205 SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ +VI+RD K N+ L+ KI DFGLA + GT Y APE +
Sbjct: 145 N--RVIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPEVLCK 200
Query: 265 GHLYVKSDVYGFGVVLVEILTGLRALDTN 293
+ D++ G +L +L G +T+
Sbjct: 201 KGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 41 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 94 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 150 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 202
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 26 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 79 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 187
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 41 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 94 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 150 KYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAP 202
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 27 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 80 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 136 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 188
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 85 VLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPN 143
+GEG FG V +G ++ + P + + + K S+S++ E++ E + + HP+
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVA--IKTCKNCTSDSVR--EKFLQEALTMRQFDHPH 77
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V+L+G E+ + ++ E G L + L R S+ LA I + A LA+L
Sbjct: 78 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLD-LASLILYAYQLSTA--LAYLE 133
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA 263
+ K+ ++RD A N+L+ + K+ DFGL++ ++ + + + APE +
Sbjct: 134 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESIN 190
Query: 264 TGHLYVKSDVYGFGVVLVEIL 284
SDV+ FGV + EIL
Sbjct: 191 FRRFTSASDVWMFGVCMWEIL 211
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 77 TRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFL 136
+ N+ LG+G F V + K G + +I KKL++ Q E E
Sbjct: 5 SDNYDVKEELGKGAFSVVRR--CVHKTTGLEFAAKIINTKKLSARDFQKLER---EARIC 59
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
+L HPN+VRL E+ LV++ + G L + R + A + +I
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI----L 115
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGS---YTAKISDFGLAKLGPSASQSHVTTRVMGT 253
+A+ H++ +++R+ K N+LL K++DFGLA + S GT
Sbjct: 116 ESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGT 170
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GY +PE + D++ GV+L +L G
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 53 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 106 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 162 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 214
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 35/217 (16%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS-ESLQGFEEWQSEVNFLGRLSHPNL 144
+G+G FG+V++G G +AVK +S E F E +E+ L H N+
Sbjct: 11 IGKGRFGEVWRG---------KWRGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENI 59
Query: 145 VRLLGYCWEDK----ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
+ + +D +L LV ++ + GSL ++L +V+ + +K+A+ A GLA
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLA 114
Query: 201 FLH-----TSDKQVI-YRDFKASNILLDGSYTAKISDFGLAKLGPSASQS--HVTTRVMG 252
LH T K I +RD K+ NIL+ + T I+D GLA SA+ + +G
Sbjct: 115 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 174
Query: 253 TYGYAAPEY----VATGHL--YVKSDVYGFGVVLVEI 283
T Y APE + H + ++D+Y G+V EI
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 31/243 (12%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R ++ V+G G FG V++ L SG ++A+KK+ LQ E+
Sbjct: 24 RPQEVSYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNREL 72
Query: 134 NFLGRLSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAW 185
+ +L H N+VRL + + E L LV +++ + + H + R P+ +
Sbjct: 73 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY 131
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQS 244
++L + R LA++H+ + +RD K N+LLD + K+ DFG AK +
Sbjct: 132 -VKLYM-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRG 184
Query: 245 HVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVD 303
+ + Y APE + Y S DV+ G VL E+L G + SG LV+
Sbjct: 185 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVE 242
Query: 304 WIK 306
IK
Sbjct: 243 IIK 245
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 31/243 (12%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R ++ V+G G FG V++ L SG ++A+KK+ LQ E+
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNREL 64
Query: 134 NFLGRLSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAW 185
+ +L H N+VRL + + E L LV +++ + + H + R P+ +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY 123
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQS 244
++L + R LA++H+ + +RD K N+LLD + K+ DFG AK +
Sbjct: 124 -VKLYM-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRG 176
Query: 245 HVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVD 303
+ + Y APE + Y S DV+ G VL E+L G + SG LV+
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVE 234
Query: 304 WIK 306
IK
Sbjct: 235 IIK 237
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 42 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 95 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 203
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 141/305 (46%), Gaps = 47/305 (15%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNS-ESLQGFEEWQSEVNFLGRLSHPN 143
+G+G FG+V++G W E+ +AVK +S E F E +E+ L H N
Sbjct: 14 IGKGRFGEVWRGKWRGEE----------VAVKIFSSREERSWFRE--AEIYQTVMLRHEN 61
Query: 144 LVRLLGYCWEDK----ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
++ + +D +L LV ++ + GSL ++L +V+ + +K+A+ A GL
Sbjct: 62 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGL 116
Query: 200 AFLH-----TSDKQVI-YRDFKASNILLDGSYTAKISDFGLAKLGPSASQS--HVTTRVM 251
A LH T K I +RD K+ NIL+ + T I+D GLA SA+ + +
Sbjct: 117 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 176
Query: 252 GTYGYAAPEY----VATGHL--YVKSDVYGFGVVLVEIL--TGLRALDTNRPSGQHNLVD 303
GT Y APE + H + ++D+Y G+V EI + + + ++LV
Sbjct: 177 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 236
Query: 304 WIKPYLSEKRKFRHIIDARLQGQYPYK-----AAYQIAQLSLKCLEAEPKHRPSMREVVE 358
P + E RK + + +L+ P + A +A++ +C A R + + +
Sbjct: 237 -SDPSVEEMRKV--VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 293
Query: 359 TLERL 363
TL +L
Sbjct: 294 TLSQL 298
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 42 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 95 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 203
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 31/243 (12%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R ++ V+G G FG V++ L SG ++A+KK+ LQ E+
Sbjct: 35 RPQEVSYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNREL 83
Query: 134 NFLGRLSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAW 185
+ +L H N+VRL + + E L LV +++ + + H + R P+ +
Sbjct: 84 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY 142
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQS 244
++L + R LA++H+ + +RD K N+LLD + K+ DFG AK +
Sbjct: 143 -VKLYM-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRG 195
Query: 245 HVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVD 303
+ + Y APE + Y S DV+ G VL E+L G + SG LV+
Sbjct: 196 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVE 253
Query: 304 WIK 306
IK
Sbjct: 254 IIK 256
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 28 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 81 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 136
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 137 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 189
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 31/243 (12%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R ++ V+G G FG V++ L SG ++A+KK+ LQ E+
Sbjct: 28 RPQEVSYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNREL 76
Query: 134 NFLGRLSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAW 185
+ +L H N+VRL + + E L LV +++ + + H + R P+ +
Sbjct: 77 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY 135
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQS 244
++L + R LA++H+ + +RD K N+LLD + K+ DFG AK +
Sbjct: 136 -VKLYM-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRG 188
Query: 245 HVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVD 303
+ + Y APE + Y S DV+ G VL E+L G + SG LV+
Sbjct: 189 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVE 246
Query: 304 WIK 306
IK
Sbjct: 247 IIK 249
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 32 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 85 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAP 193
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 31/238 (13%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGR 138
++ V+G G FG V++ L SG ++A+KK+ LQ E+ + +
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRK 81
Query: 139 LSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAWNIRLK 190
L H N+VRL + + E L LV +++ + + H + R P+ + ++L
Sbjct: 82 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY-VKLY 139
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTTR 249
+ R LA++H+ + +RD K N+LLD + K+ DFG AK +
Sbjct: 140 M-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVS 193
Query: 250 VMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIK 306
+ + Y APE + Y S DV+ G VL E+L G + SG LV+ IK
Sbjct: 194 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK 249
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG V + EKA +G V K +N+ ++E++ + +L HP L+
Sbjct: 59 LGSGAFGVVHRCV--EKA-----TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLI 111
Query: 146 RLLGYCWEDK-ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
L +EDK E++L+ EF+ G L + + A ++ + A GL +H
Sbjct: 112 NLHD-AFEDKYEMVLILEFLSGGELFDRI---AAEDYKMSEAEVINYMRQACEGLKHMH- 166
Query: 205 SDKQVIYRDFKASNILLD--GSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGYAAPEY 261
+ +++ D K NI+ + + + KI DFGLA KL P + T +AAPE
Sbjct: 167 -EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP----DEIVKVTTATAEFAAPEI 221
Query: 262 VATGHLYVKSDVYGFGVVLVEILTGL 287
V + +D++ GV+ +L+GL
Sbjct: 222 VDREPVGFYTDMWAIGVLGYVLLSGL 247
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 31/280 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+GGF K F+ A K I K L + Q E+ E++ L+H ++V
Sbjct: 25 LGKGGFAKCFE---ISDADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQHVV 80
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
G+ ++ + +V E ++ SL R A +P A +I +G +LH +
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN 136
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA-T 264
+VI+RD K N+ L+ KI DFGLA + T + GT Y APE ++
Sbjct: 137 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKK 192
Query: 265 GHLYVKSDVYGFGVVLVEILTGLRALDTNR--------PSGQHNLVDWIKP--------Y 308
GH + + DV+ G ++ +L G +T+ ++++ I P
Sbjct: 193 GHSF-EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKM 251
Query: 309 LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
L R I+ L ++ + + Y A+L + CL P+
Sbjct: 252 LQTDPTARPTINELLNDEF-FTSGYIPARLPITCLTIPPR 290
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 26 VGSGAYGSVCAAF-------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 79 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 187
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 31/280 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+GGF K F+ A K I K L + Q E+ E++ L+H ++V
Sbjct: 29 LGKGGFAKCFE---ISDADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQHVV 84
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
G+ ++ + +V E ++ SL R A +P A +I +G +LH +
Sbjct: 85 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN 140
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA-T 264
+VI+RD K N+ L+ KI DFGLA + T + GT Y APE ++
Sbjct: 141 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKK 196
Query: 265 GHLYVKSDVYGFGVVLVEILTGLRALDTNR--------PSGQHNLVDWIKP--------Y 308
GH + + DV+ G ++ +L G +T+ ++++ I P
Sbjct: 197 GHSF-EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKM 255
Query: 309 LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
L R I+ L ++ + + Y A+L + CL P+
Sbjct: 256 LQTDPTARPTINELLNDEF-FTSGYIPARLPITCLTIPPR 294
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 141/305 (46%), Gaps = 47/305 (15%)
Query: 86 LGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNS-ESLQGFEEWQSEVNFLGRLSHPN 143
+G+G FG+V++G W E+ +AVK +S E F E +E+ L H N
Sbjct: 17 IGKGRFGEVWRGKWRGEE----------VAVKIFSSREERSWFRE--AEIYQTVMLRHEN 64
Query: 144 LVRLLGYCWEDK----ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
++ + +D +L LV ++ + GSL ++L +V+ + +K+A+ A GL
Sbjct: 65 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGL 119
Query: 200 AFLH-----TSDKQVI-YRDFKASNILLDGSYTAKISDFGLAKLGPSASQS--HVTTRVM 251
A LH T K I +RD K+ NIL+ + T I+D GLA SA+ + +
Sbjct: 120 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 179
Query: 252 GTYGYAAPEY----VATGHL--YVKSDVYGFGVVLVEIL--TGLRALDTNRPSGQHNLVD 303
GT Y APE + H + ++D+Y G+V EI + + + ++LV
Sbjct: 180 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 239
Query: 304 WIKPYLSEKRKFRHIIDARLQGQYPYK-----AAYQIAQLSLKCLEAEPKHRPSMREVVE 358
P + E RK + + +L+ P + A +A++ +C A R + + +
Sbjct: 240 -SDPSVEEMRKV--VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 296
Query: 359 TLERL 363
TL +L
Sbjct: 297 TLSQL 301
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 31/243 (12%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R ++ V+G G FG V++ L SG ++A+KK+ LQ E+
Sbjct: 17 RPQEVSYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNREL 65
Query: 134 NFLGRLSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAW 185
+ +L H N+VRL + + E L LV +++ + + H + R P+ +
Sbjct: 66 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY 124
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQS 244
++L + R LA++H+ + +RD K N+LLD + K+ DFG AK +
Sbjct: 125 -VKLYM-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRG 177
Query: 245 HVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVD 303
+ + Y APE + Y S DV+ G VL E+L G + SG LV+
Sbjct: 178 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVE 235
Query: 304 WIK 306
IK
Sbjct: 236 IIK 238
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 36 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 89 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAP 197
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 50 VGSGAYGSVCAAF-------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 103 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 211
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 40 VGSGAYGSVCAAF-------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 92
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 93 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 148
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 149 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 201
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 49 VGSGAYGSVCAAF-------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 102 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 158 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 210
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 31/243 (12%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R ++ V+G G FG V++ L SG ++A+KK+ LQ E+
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNREL 64
Query: 134 NFLGRLSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAW 185
+ +L H N+VRL + + E L LV +++ + + H + R P+ +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY 123
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQS 244
++L + R LA++H+ + +RD K N+LLD + K+ DFG AK +
Sbjct: 124 -VKLYM-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRG 176
Query: 245 HVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVD 303
+ + Y APE + Y S DV+ G VL E+L G + SG LV+
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVE 234
Query: 304 WIK 306
IK
Sbjct: 235 IIK 237
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 31/243 (12%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R ++ V+G G FG V++ L SG ++A+KK+ LQ E+
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNREL 64
Query: 134 NFLGRLSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAW 185
+ +L H N+VRL + + E L LV +++ + + H + R P+ +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY 123
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQS 244
++L + R LA++H+ + +RD K N+LLD + K+ DFG AK +
Sbjct: 124 -VKLYM-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRG 176
Query: 245 HVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVD 303
+ + Y APE + Y S DV+ G VL E+L G + SG LV+
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVE 234
Query: 304 WIK 306
IK
Sbjct: 235 IIK 237
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 53 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 106 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR Y AP
Sbjct: 162 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYRAP 214
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG V + + E+A G + A K + + E + E+ + L HP LV
Sbjct: 165 LGTGAFGVVHR--VTERATGNN-----FAAKFVMTPHESDKETVRKEIQTMSVLRHPTLV 217
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASV-QPLAWNIRLKIAIGAARGLAFLHT 204
L +D E++++YEFM G LF + A ++ + ++ +GL +H
Sbjct: 218 NLHDAFEDDNEMVMIYEFMSGG----ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH- 272
Query: 205 SDKQVIYRDFKASNILLDG--SYTAKISDFGL-AKLGPSASQSHVTTRVMGTYGYAAPEY 261
+ ++ D K NI+ S K+ DFGL A L P S VTT GT +AAPE
Sbjct: 273 -ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK-VTT---GTAEFAAPEV 327
Query: 262 VATGHLYVKSDVYGFGVVLVEILTGL 287
+ +D++ GV+ +L+GL
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSGL 353
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 53/294 (18%)
Query: 84 TVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHP 142
T L E G+++KG W G+ V+ V K+ S + ++ E L SHP
Sbjct: 16 TKLNENHSGELWKGRW--------QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 143 NLVRLLGYCWEDK--ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
N++ +LG C L+ +M GSL N L V + + +K A+ ARG+A
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFV--VDQSQAVKFALDMARGMA 125
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPE 260
FLHT + + + ++++D TA+I S + V AP
Sbjct: 126 FLHTLEPLIPRHALNSRSVMIDEDMTARI------------SMADVKFSFQSPGRMYAPA 173
Query: 261 YVATGHLYVK--------SDVYGFGVVLVEILTGLRALD--TNRPSGQHNLVDWIKPYLS 310
+VA L K +D++ F V+L E++T +N G ++ ++P +
Sbjct: 174 WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTI- 232
Query: 311 EKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQ 364
P + +++L C+ +P RP +V LE++Q
Sbjct: 233 -----------------PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 28/222 (12%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS---- 131
AT ++ +G G +G V+K SG +A+K + + G
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKA-------RDPHSGHFVALKSVRVPNGGGGGGGLPISTV 59
Query: 132 -EVNFLGRLS---HPNLVRLLGYCWE---DKEL--LLVYEFMQKGSLENHLFGRGASVQP 182
EV L RL HPN+VRL+ C D+E+ LV+E + + L +L P
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 118
Query: 183 LAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSAS 242
A I+ + RGL FLH + +++RD K NIL+ T K++DFGLA++ S
Sbjct: 119 -AETIK-DLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARI---YS 171
Query: 243 QSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 284
T V+ T Y APE + D++ G + E+
Sbjct: 172 YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 31/243 (12%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R ++ V+G G FG V++ L SG ++A+KK+ LQ E+
Sbjct: 20 RPQEVSYTDTKVIGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNREL 68
Query: 134 NFLGRLSHPNLVRLLGYCWEDKE------LLLVYEFMQKG--SLENHLFGRGASVQPLAW 185
+ +L H N+VRL + + E L LV +++ + + H + R P+ +
Sbjct: 69 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY 127
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQS 244
++L + R LA++H+ + +RD K N+LLD + K+ DFG AK +
Sbjct: 128 -VKLYM-YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRG 180
Query: 245 HVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVD 303
+ + Y APE + Y S DV+ G VL E+L G + SG LV+
Sbjct: 181 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVE 238
Query: 304 WIK 306
IK
Sbjct: 239 IIK 241
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 123/281 (43%), Gaps = 33/281 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+GGF K F+ A K I K L + Q E+ E++ L+H ++V
Sbjct: 23 LGKGGFAKCFE---ISDADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQHVV 78
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
G+ ++ + +V E ++ SL R A +P A +I +G +LH +
Sbjct: 79 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN 134
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGYAAPEYVA- 263
+VI+RD K N+ L+ KI DFGLA K+ + V + GT Y APE ++
Sbjct: 135 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSK 189
Query: 264 TGHLYVKSDVYGFGVVLVEILTGLRALDTNR--------PSGQHNLVDWIKP-------- 307
GH + + DV+ G ++ +L G +T+ ++++ I P
Sbjct: 190 KGHSF-EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 248
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPK 348
L R I+ L ++ + + Y A+L + CL P+
Sbjct: 249 MLQTDPTARPTINELLNDEF-FTSGYIPARLPITCLTIPPR 288
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 107/232 (46%), Gaps = 41/232 (17%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSE 132
R R +G+G +G+V++G W G +AVK +S Q + ++E
Sbjct: 4 RTVARQVALVECVGKGRYGEVWRGLW----------HGESVAVKIFSSRDEQSWFR-ETE 52
Query: 133 VNFLGRLSHPNLVRLLGYCWED-------KELLLVYEFMQKGSLENHLFGRGASVQPLAW 185
+ L H N+ LG+ D +L L+ + + GSL + F + +++P
Sbjct: 53 IYNTVLLRHDNI---LGFIASDMTSRNSSTQLWLITHYHEHGSLYD--FLQRQTLEP--- 104
Query: 186 NIRLKIAIGAARGLAFLH-----TSDKQVI-YRDFKASNILLDGSYTAKISDFGLAKLGP 239
++ L++A+ AA GLA LH T K I +RDFK+ N+L+ + I+D GLA +
Sbjct: 105 HLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHS 164
Query: 240 SASQ--SHVTTRVMGTYGYAAPEYV------ATGHLYVKSDVYGFGVVLVEI 283
S +GT Y APE + Y +D++ FG+VL EI
Sbjct: 165 QGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 19/183 (10%)
Query: 113 IAVKKLNSESLQGFEE-WQSEVNFLGRLS-HPNLVRLLGYCWEDKELLLVYEFMQKGSLE 170
+ ++L+ E L+ E + E + L +++ HP+++ L+ + LV++ M+KG L
Sbjct: 129 VTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELF 188
Query: 171 NHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKIS 230
++L + A L+ I ++FLH ++ +++RD K NILLD + ++S
Sbjct: 189 DYLTEKVA----LSEKETRSIMRSLLEAVSFLHANN--IVHRDLKPENILLDDNMQIRLS 242
Query: 231 DFGLA-KLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYV------KSDVYGFGVVLVEI 283
DFG + L P + GT GY APE + + D++ GV+L +
Sbjct: 243 DFGFSCHLEPGEK----LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTL 298
Query: 284 LTG 286
L G
Sbjct: 299 LAG 301
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 23/183 (12%)
Query: 181 QPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK---L 237
+P+ + + ARG+ FL S ++ I+RD A NILL + KI DFGLA+
Sbjct: 194 EPITMEDLISYSFQVARGMEFL--SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 238 GPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSG 297
P + T + + APE + KSDV+ +GV+L EI +
Sbjct: 252 NPDYVRKGDTRLPL---KWMAPESIFDKIYSTKSDVWSYGVLLWEIFS------------ 296
Query: 298 QHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVV 357
L P + F + ++ + P + +I Q+ L C +PK RP E+V
Sbjct: 297 ---LGGSPYPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELV 353
Query: 358 ETL 360
E L
Sbjct: 354 EKL 356
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL-QGFEEWQ-SEVNFLGRLSHPN 143
+GEG +G V+K ++ G A+KK+ E +G E++ L L H N
Sbjct: 10 IGEGTYGVVYKA--------QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 144 LVRLLGYCWEDKELLLVYEFMQKG--SLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
+V+L K L+LV+E + + L + G SV ++ ++L G+A+
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL------LNGIAY 115
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEY 261
H D++V++RD K N+L++ KI+DFGLA+ + + T + T Y AP+
Sbjct: 116 CH--DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDV 171
Query: 262 VATGHLYVKS-DVYGFGVVLVEILTG 286
+ Y + D++ G + E++ G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ +G G FG+V +G A+K L+ + L+ E +E L
Sbjct: 43 FERIKTIGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E+M G + +HL G +P A +I +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT-- 153
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+L+D K++DFG AK T + GT Y
Sbjct: 154 --FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEY 204
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI D+GLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ +G G FG+V +G A+K L+ + L+ E +E L
Sbjct: 43 FERIKTIGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E+M G + +HL G +P A +I +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT-- 153
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+L+D K++DFG AK T + GT Y
Sbjct: 154 --FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEY 204
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 31/279 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+GGF K F+ A K I K L + Q E+ E++ L+H ++V
Sbjct: 25 LGKGGFAKCFE---ISDADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQHVV 80
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
G+ ++ + +V E ++ SL R A +P A +I +G +LH +
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN 136
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVA-T 264
+VI+RD K N+ L+ KI DFGLA + T + GT Y APE ++
Sbjct: 137 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKK 192
Query: 265 GHLYVKSDVYGFGVVLVEILTGLRALDTNR--------PSGQHNLVDWIKP--------Y 308
GH + + DV+ G ++ +L G +T+ ++++ I P
Sbjct: 193 GHSF-EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKM 251
Query: 309 LSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEP 347
L R I+ L ++ + + Y A+L + CL P
Sbjct: 252 LQTDPTARPTINELLNDEF-FTSGYIPARLPITCLTIPP 289
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL-QGFEEWQ-SEVNFLGRLSHPN 143
+GEG +G V+K ++ G A+KK+ E +G E++ L L H N
Sbjct: 10 IGEGTYGVVYKA--------QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 144 LVRLLGYCWEDKELLLVYEFMQKG--SLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
+V+L K L+LV+E + + L + G SV ++ ++L G+A+
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL------LNGIAY 115
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEY 261
H D++V++RD K N+L++ KI+DFGLA+ + + T + T Y AP+
Sbjct: 116 CH--DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDV 171
Query: 262 VATGHLYVKS-DVYGFGVVLVEILTG 286
+ Y + D++ G + E++ G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL-QGFEEWQ-SEVNFLGRLSHPN 143
+GEG +G V+K ++ G A+KK+ E +G E++ L L H N
Sbjct: 10 IGEGTYGVVYKA--------QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 144 LVRLLGYCWEDKELLLVYEFMQKG--SLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
+V+L K L+LV+E + + L + G SV ++ ++L G+A+
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL------LNGIAY 115
Query: 202 LHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEY 261
H D++V++RD K N+L++ KI+DFGLA+ + + T + T Y AP+
Sbjct: 116 CH--DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDV 171
Query: 262 VATGHLYVKS-DVYGFGVVLVEILTG 286
+ Y + D++ G + E++ G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 119/279 (42%), Gaps = 32/279 (11%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEE--W-QSEVN 134
++F V+G G + KV L + + + A+K + E + E+ W Q+E +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKK-------TDRIYAMKVVKKELVNDDEDIDWVQTEKH 61
Query: 135 FLGRLS-HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ S HP LV L + L V E++ G L H+ + + A +I++
Sbjct: 62 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL 121
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
L +LH ++ +IYRD K N+LLD K++D+G+ K G + T+ GT
Sbjct: 122 A----LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGT 173
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDT--NRPSGQHNLVDWIKPYLSE 311
Y APE + D + GV++ E++ G D + + N D++ + E
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 233
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHR 350
K Q + P + + A + L +PK R
Sbjct: 234 K-----------QIRIPRSLSVKAASVLKSFLNKDPKER 261
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 119/279 (42%), Gaps = 32/279 (11%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEE--W-QSEVN 134
++F V+G G + KV L + + + A+K + E + E+ W Q+E +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKK-------TDRIYAMKVVKKELVNDDEDIDWVQTEKH 72
Query: 135 FLGRLS-HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ S HP LV L + L V E++ G L H+ + + A +I++
Sbjct: 73 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL 132
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
L +LH ++ +IYRD K N+LLD K++D+G+ K G + T+ GT
Sbjct: 133 A----LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGT 184
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDT--NRPSGQHNLVDWIKPYLSE 311
Y APE + D + GV++ E++ G D + + N D++ + E
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 244
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHR 350
K Q + P + + A + L +PK R
Sbjct: 245 K-----------QIRIPRSMSVKAASVLKSFLNKDPKER 272
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVN---FL 136
F+ LG G FG+V +G A+K L+ + + +E + +N L
Sbjct: 43 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRIL 95
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E+ G + +HL G +P A +I +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-- 153
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+++D K++DFGLAK T + GT Y
Sbjct: 154 --FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR-----TWXLCGTPEY 204
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 50 VGSGAYGSVCAAF-------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 103 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ V TR Y AP
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----WYRAP 211
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 26 VGSGAYGSVCAAF-------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGAS------------VQPLAWNIRLKI 191
++ LL + L E L HL G + VQ L + I
Sbjct: 79 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQI---- 130
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
RGL ++H++D +I+RD K SN+ ++ KI DFGLA+ +V TR
Sbjct: 131 ----LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 182
Query: 252 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
Y APE + Y ++ D++ G ++ E+LTG
Sbjct: 183 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 119/279 (42%), Gaps = 32/279 (11%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEE--W-QSEVN 134
++F V+G G + KV L + + + A+K + E + E+ W Q+E +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKK-------TDRIYAMKVVKKELVNDDEDIDWVQTEKH 57
Query: 135 FLGRLS-HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ S HP LV L + L V E++ G L H+ + + A +I++
Sbjct: 58 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL 117
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
L +LH ++ +IYRD K N+LLD K++D+G+ K G + T+ GT
Sbjct: 118 A----LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGT 169
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDT--NRPSGQHNLVDWIKPYLSE 311
Y APE + D + GV++ E++ G D + + N D++ + E
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 229
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHR 350
K Q + P + + A + L +PK R
Sbjct: 230 K-----------QIRIPRSLSVKAASVLKSFLNKDPKER 257
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 33 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 85
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 145
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 146 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 194
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 195 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQI 150
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 151 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL---NSESLQGFEEWQSE 132
AT ++ +G G +G V+K SG +A+K + N E + E
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA-------RDPHSGHFVALKSVRVPNGEEGLPISTVR-E 53
Query: 133 VNFLGRLS---HPNLVRLLGYCWE---DKEL--LLVYEFMQKGSLENHLFGRGASVQPLA 184
V L RL HPN+VRL+ C D+E+ LV+E + + L +L P A
Sbjct: 54 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP-A 111
Query: 185 WNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQS 244
I+ + RGL FLH + +++RD K NIL+ T K++DFGLA++ S
Sbjct: 112 ETIK-DLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQ 165
Query: 245 HVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 284
V+ T Y APE + D++ G + E+
Sbjct: 166 MALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 140/326 (42%), Gaps = 59/326 (18%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKL-NSESLQGFEEWQS 131
R + + +G+G +G+V+ G W EK +AVK +E F E +
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEK----------VAVKVFFTTEEASWFRE--T 80
Query: 132 EVNFLGRLSHPNLVRLLGYCWED-------KELLLVYEFMQKGSLENHLFGRGASVQPLA 184
E+ + H N+ LG+ D +L L+ ++ + GSL ++L + +
Sbjct: 81 EIYQTVLMRHENI---LGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM- 136
Query: 185 WNIRLKIAIGAARGLAFLHTS------DKQVIYRDFKASNILLDGSYTAKISDFGLA-KL 237
LK+A + GL LHT + +RD K+ NIL+ + T I+D GLA K
Sbjct: 137 ----LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192
Query: 238 GPSASQSHV--TTRVMGTYGYAAPEYVATG------HLYVKSDVYGFGVVLVEI----LT 285
++ + TRV GT Y PE + Y+ +D+Y FG++L E+ ++
Sbjct: 193 ISDTNEVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVS 251
Query: 286 GLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYK-----AAYQIAQLSL 340
G + P H+LV P + R+ I +L+ +P + Q+ +L
Sbjct: 252 GGIVEEYQLP--YHDLVP-SDPSYEDMREIVCI--KKLRPSFPNRWSSDECLRQMGKLMT 306
Query: 341 KCLEAEPKHRPSMREVVETLERLQAS 366
+C P R + V +TL ++ S
Sbjct: 307 ECWAHNPASRLTALRVKKTLAKMSES 332
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K +K GK + I ++L+S S +G EE + EVN L + HPN
Sbjct: 13 LGSGQFAIVRK--CRQKGTGKEYAAKFIKKRRLSS-SRRGVSREEIEREVNILREIRHPN 69
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI----LDGVHYLH 125
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ K++ + D K NI LLD + K+ DFG+A + ++ + GT + AP
Sbjct: 126 S--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAP 180
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
F+ LG G FG+V + K G + ++ +K+ L+ E +E L +
Sbjct: 36 FERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKV--VKLKQIEHTLNEKRILQAV 91
Query: 140 SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
+ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----F 147
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y AP
Sbjct: 148 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 200
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
E + + D + GV++ E+ G ++P
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 26 VGSGAYGSVCAAF-------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 79 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGLA+ V TR Y AP
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAP 187
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 151 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 151 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 151 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--SEVNFLGRLSH-P 142
+G G +G V K SG ++AVK++ S ++ E+ Q +++ + R S P
Sbjct: 30 IGRGAYGSVNKM-------VHKPSGQIMAVKRIRS-TVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
+V+ G + + + + E M + + + + I KI + + L L
Sbjct: 82 YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL 141
Query: 203 HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
+ K +I+RD K SNILLD S K+ DFG++ S TR G Y APE +
Sbjct: 142 KENLK-IIHRDIKPSNILLDRSGNIKLCDFGISG---QLVDSIAKTRDAGCRPYMAPERI 197
Query: 263 ---ATGHLY-VKSDVYGFGVVLVEILTG 286
A+ Y V+SDV+ G+ L E+ TG
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATG 225
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL---NSESLQGFEEWQSE 132
AT ++ +G G +G V+K SG +A+K + N E + E
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA-------RDPHSGHFVALKSVRVPNGEEGLPISTVR-E 53
Query: 133 VNFLGRLS---HPNLVRLLGYCWE---DKEL--LLVYEFMQKGSLENHLFGRGASVQPLA 184
V L RL HPN+VRL+ C D+E+ LV+E + + L +L P A
Sbjct: 54 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP-A 111
Query: 185 WNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQS 244
I+ + RGL FLH + +++RD K NIL+ T K++DFGLA++ S
Sbjct: 112 ETIK-DLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQ 165
Query: 245 HVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 284
V+ T Y APE + D++ G + E+
Sbjct: 166 MALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 59 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 111
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 171
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 172 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 220
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 151 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K +K GK + I ++L+S S +G EE + EVN L + HPN
Sbjct: 20 LGSGQFAIVRK--CRQKGTGKEYAAKFIKKRRLSS-SRRGVSREEIEREVNILREIRHPN 76
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 77 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI----LDGVHYLH 132
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ K++ + D K NI LLD + K+ DFG+A + ++ + GT + AP
Sbjct: 133 S--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAP 187
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
F+ LG G FG+V + K G + ++ +K+ L+ E +E L +
Sbjct: 36 FERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKV--VKLKQIEHTLNEKRILQAV 91
Query: 140 SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
+ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 147
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y AP
Sbjct: 148 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 200
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
E + + D + GV++ E+ G ++P
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--SEVNFLGRLSH 141
+LG+G FG+V K + AVK +N S + + EV L +L H
Sbjct: 28 CMLGKGSFGEVLKC-------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
PN+++L + +V E G L + + R + + + +I G+ +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITY 136
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+H + +++RD K NILL+ KI DFGL+ Q+ +GT Y A
Sbjct: 137 MHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYYIA 191
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTG 286
PE V G K DV+ GV+L +L+G
Sbjct: 192 PE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
F+ LG G FG+V + K G + ++ +K+ L+ E +E L +
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHKETGNHFAMKILDKQKV--VKLKQIEHTLNEKRILQAV 98
Query: 140 SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
+ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 154
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y AP
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
E + + D + GV++ E+ G ++P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 151 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 84 TVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--SEVNFLGRLSH 141
+LG+G FG+V K + AVK +N S + + EV L +L H
Sbjct: 28 CMLGKGSFGEVLKC-------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
PN+++L + +V E G L + + R + + + +I G+ +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITY 136
Query: 202 LHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+H + +++RD K NILL+ KI DFGL+ Q+ +GT Y A
Sbjct: 137 MHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYYIA 191
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTG 286
PE V G K DV+ GV+L +L+G
Sbjct: 192 PE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
F+ LG G FG+V + K G + ++ +K+ L+ E +E L +
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHKETGNHFAMKILDKQKV--VKLKQIEHTLNEKRILQAV 98
Query: 140 SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
+ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 154
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y AP
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
E + + D + GV++ E+ G ++P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
F+ LG G FG+V + K G + ++ +K+ L+ E +E L +
Sbjct: 64 FERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKV--VKLKQIEHTLNEKRILQAV 119
Query: 140 SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
+ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 175
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y AP
Sbjct: 176 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 228
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
E + + D + GV++ E+ G ++P
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 102/239 (42%), Gaps = 42/239 (17%)
Query: 73 LRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSE 132
LR A+ +F+ VLG+G FG+V K + A+KK+ + SE
Sbjct: 2 LRYAS-DFEEIAVLGQGAFGQVVKA-------RNALDSRYYAIKKIRHTE-EKLSTILSE 52
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKE-------------LLLVYEFMQKGSLENHLFGRGAS 179
V L L+H +VR E + L + E+ + +L + + +
Sbjct: 53 VMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLN 112
Query: 180 VQ-PLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-- 236
Q W + +I L+++H+ + +I+RD K NI +D S KI DFGLAK
Sbjct: 113 QQRDEYWRLFRQIL----EALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 237 -----LGPSASQ-----SHVTTRVMGTYGYAAPEYV-ATGHLYVKSDVYGFGVVLVEIL 284
+ SQ S T +GT Y A E + TGH K D+Y G++ E++
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
F+ LG G FG+V + K G + ++ +K+ L+ E +E L +
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKV--VKLKQIEHTLNEKRILQAV 99
Query: 140 SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
+ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 155
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y AP
Sbjct: 156 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 208
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
E + + D + GV++ E+ G ++P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
F+ LG G FG+V + K G + ++ +K+ L+ E +E L +
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKV--VKLKQIEHTLNEKRILQAV 99
Query: 140 SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
+ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 155
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y AP
Sbjct: 156 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 208
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
E + + D + GV++ E+ G ++P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
F+ LG G FG+V + K G + ++ +K+ L+ E +E L +
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHKETGNHFAMKILDKQKV--VKLKQIEHTLNEKRILQAV 98
Query: 140 SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
+ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 154
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y AP
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
E + + D + GV++ E+ G ++P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 25 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 77
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 137
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 138 VLT----FEYLHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR-----TWXLC 186
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 187 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
F+ LG G FG+V + K G + ++ +K+ L+ E +E L +
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKV--VKLKQIEHTLNEKRILQAV 99
Query: 140 SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
+ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 155
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y AP
Sbjct: 156 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 208
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
E + + D + GV++ E+ G ++P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 22/207 (10%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ--SEVNFLGRLSHP 142
+LG+G FG+V K + AVK +N S + + EV L +L HP
Sbjct: 29 MLGKGSFGEVLKC-------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N+++L + +V E G L + + R + + + +I G+ ++
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYM 137
Query: 203 HTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
H + +++RD K NILL+ KI DFGL+ Q+ +GT Y AP
Sbjct: 138 HKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYYIAP 192
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V G K DV+ GV+L +L+G
Sbjct: 193 E-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 151 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 39 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 91
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 152 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 200
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 49/251 (19%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFL 136
N+ ++G G +G V+ + +K K+ +A+KK+N E L + E+ L
Sbjct: 27 NYIIKHLIGRGSYGYVYLAY--DKNTEKN-----VAIKKVNRMFEDLIDCKRILREITIL 79
Query: 137 GRLSHPNLVRLLGYCWEDK-----ELLLVYEFMQ---KGSLENHLFGRGASVQPLAWNIR 188
RL ++RL D EL +V E K + +F ++ + +N+
Sbjct: 80 NRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLL 139
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTT 248
L G F+H S +I+RD K +N LL+ + K+ DFGLA+ S +++
Sbjct: 140 L--------GENFIHES--GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVN 189
Query: 249 RV--------------------MGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGL 287
+ + T Y APE + Y KS D++ G + E+L L
Sbjct: 190 DLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNML 249
Query: 288 RALDTNRPSGQ 298
++ N P+ +
Sbjct: 250 QS-HINDPTNR 259
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 76 ATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL---NSESLQGFEEWQSE 132
AT ++ +G G +G V+K SG +A+K + N E + E
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA-------RDPHSGHFVALKSVRVPNGEEGLPISTVR-E 53
Query: 133 VNFLGRLS---HPNLVRLLGYCWE---DKEL--LLVYEFMQKGSLENHLFGRGASVQPLA 184
V L RL HPN+VRL+ C D+E+ LV+E + + L +L P A
Sbjct: 54 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP-A 111
Query: 185 WNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQS 244
I+ + RGL FLH + +++RD K NIL+ T K++DFGLA++ S
Sbjct: 112 ETIK-DLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQ 165
Query: 245 HVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 284
V+ T Y APE + D++ G + E+
Sbjct: 166 MALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
+GEG G V + SG +AVK ++ Q E +EV + H N+V
Sbjct: 53 IGEGSTGIVCLA-------REKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVV 105
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+ +EL ++ EF+Q G+L + + + + +A + + LA+LH
Sbjct: 106 EMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA-----TVCEAVLQALAYLHA- 159
Query: 206 DKQVIYRDFKASNILLDGSYTAKISDFGL-AKLGPSASQSHVTTRVMGTYGYAAPEYVAT 264
+ VI+RD K+ +ILL K+SDFG A++ + ++GT + APE ++
Sbjct: 160 -QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK---XLVGTPYWMAPEVISR 215
Query: 265 GHLYVKSDVYGFGVVLVEILTG 286
+ D++ G++++E++ G
Sbjct: 216 SLYATEVDIWSLGIMVIEMVDG 237
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DFGL + +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 23/237 (9%)
Query: 56 NGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAV 115
+G L T NL + VE +++ LG G F V K +K GK + I
Sbjct: 9 SGVDLGTENLYFQSMVE-----DHYEMGEELGSGQFAIVRK--CRQKGTGKEYAAKFIKK 61
Query: 116 KKLNSESLQGF--EEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHL 173
++L S S +G EE + EVN L + HPN++ L +++L+ E + G L + L
Sbjct: 62 RRLXS-SRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 120
Query: 174 FGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNI-LLDGSY---TAKI 229
+ + + A +I G+ +LH+ K++ + D K NI LLD + K+
Sbjct: 121 AEKESLTEDEATQFLKQI----LDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKL 174
Query: 230 SDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
DFG+A + ++ + GT + APE V L +++D++ GV+ +L+G
Sbjct: 175 IDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 151 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLX 199
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 151 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 15/216 (6%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
F+ LG G FG+V + K G + ++ +K+ L+ E +E L +
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKV--VKLKQIEHTLNEKRILQAV 99
Query: 140 SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
+ P LV+L ++ L +V E+ G + +HL G +P A +I +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 155
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+LH+ D +IYRD K N+++D K++DFG AK T + GT Y AP
Sbjct: 156 EYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEYLAP 208
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
E + + D + GV++ E+ G ++P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 151 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLA 199
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 151 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G + P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVN---FL 136
F+ LG G FG+V +G A+K L+ + + +E + +N L
Sbjct: 43 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRIL 95
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E+ G + +HL G +P A +I +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-- 153
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+++D +++DFGLAK T + GT Y
Sbjct: 154 --FEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR-----TWXLCGTPEY 204
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 32/279 (11%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEE--W-QSEVN 134
++F V+G G + KV L + + + A++ + E + E+ W Q+E +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKK-------TDRIYAMRVVKKELVNDDEDIDWVQTEKH 104
Query: 135 FLGRLS-HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ S HP LV L + L V E++ G L H+ + + A +I++
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL 164
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
L +LH ++ +IYRD K N+LLD K++D+G+ K G + T+ GT
Sbjct: 165 A----LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGT 216
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDT--NRPSGQHNLVDWIKPYLSE 311
Y APE + D + GV++ E++ G D + + N D++ + E
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 276
Query: 312 KRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHR 350
K Q + P + + A + L +PK R
Sbjct: 277 K-----------QIRIPRSLSVKAASVLKSFLNKDPKER 304
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 98/234 (41%), Gaps = 16/234 (6%)
Query: 56 NGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAV 115
+G L T NL T +++ LG+G F V + +K P + + +I
Sbjct: 9 SGVDLGTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRR--CVKKTPTQEYAAKIINT 66
Query: 116 KKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFG 175
KKL++ Q E E L HPN+VRL E+ LV++ + G L +
Sbjct: 67 KKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA 123
Query: 176 RGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSY---TAKISDF 232
R + A + +I + +H D +++RD K N+LL K++DF
Sbjct: 124 REYYSEADASHCIHQI----LESVNHIHQHD--IVHRDLKPENLLLASKCKGAAVKLADF 177
Query: 233 GLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
GLA Q+ GT GY +PE + D++ GV+L +L G
Sbjct: 178 GLAIEVQGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ +G G FG+V +G A+K L+ + L+ E +E L
Sbjct: 43 FERIKTIGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-- 153
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+L+D K++DFG AK T + GT Y
Sbjct: 154 --FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEY 204
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+++D +++DFG AK T +
Sbjct: 151 VLT----FEYLHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ E+ G ++P
Sbjct: 200 GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 44 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT-- 154
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y
Sbjct: 155 --FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEY 205
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 52/254 (20%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFL 136
N++ ++G G +G V+ + +K K+ +A+KK+N E L + E+ L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAY--DKNANKN-----VAIKKVNRMFEDLIDCKRILREITIL 81
Query: 137 GRLSHPNLVRLLGYCW-ED----KELLLVYEFMQ---KGSLENHLFGRGASVQPLAWNIR 188
RL ++RL ED EL +V E K + +F V+ + +N+
Sbjct: 82 NRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLL 141
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVT- 247
L G F+H S +I+RD K +N LL+ + KI DFGLA+ S H+
Sbjct: 142 L--------GEKFIHES--GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVN 191
Query: 248 ----------------------TRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEIL 284
T + T Y APE + Y S D++ G + E+L
Sbjct: 192 DLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
Query: 285 TGLRALDTNRPSGQ 298
+++ N P+ +
Sbjct: 252 NMMKS-HINNPTNR 264
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 43 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT-- 153
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y
Sbjct: 154 --FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEY 204
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 43 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT-- 153
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y
Sbjct: 154 --FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEY 204
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 43 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E+ G + +HL G +P A +I +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT-- 153
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+++D K++DFG AK T + GT Y
Sbjct: 154 --FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEY 204
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI D GLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI FGLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI DF LA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 43 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-- 153
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y
Sbjct: 154 --FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEY 204
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 43 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-- 153
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y
Sbjct: 154 --FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEY 204
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 44 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-- 154
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y
Sbjct: 155 --FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEY 205
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI D GLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 43 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-- 153
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y
Sbjct: 154 --FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEY 204
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 29 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 81
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 82 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-- 139
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y
Sbjct: 140 --FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGTPEY 190
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 191 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 151 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y APE + + D + GV++ ++ G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 44 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-- 154
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y
Sbjct: 155 --FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGTPEY 205
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 43 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E++ G + +HL G +P A +I +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-- 153
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+L+D +++DFG AK T + GT Y
Sbjct: 154 --FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEY 204
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 43 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E+ G + +HL G +P A +I +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-- 153
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+++D K++DFG AK T + GT Y
Sbjct: 154 --FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEY 204
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 33/231 (14%)
Query: 60 LPTPNLR-IFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL 118
+ T N+R F F+E VLG G F +VF + ++ GK + A+K +
Sbjct: 2 MQTTNIRKTFIFME------------VLGSGAFSEVF--LVKQRLTGK-----LFALKCI 42
Query: 119 NSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGA 178
++E+ L ++ H N+V L LV + + G L + + RG
Sbjct: 43 KKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV 102
Query: 179 SVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILL---DGSYTAKISDFGLA 235
+ A ++ ++ + A + +LH + +++RD K N+L + + I+DFGL+
Sbjct: 103 YTEKDA-SLVIQQVLSAVK---YLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156
Query: 236 KLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
K+ Q+ + + GT GY APE +A D + GV+ +L G
Sbjct: 157 KM----EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 72 ELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEW 129
E+RA R+ + +G G +G V G++G+ +A+KKL +S +
Sbjct: 22 EVRAVYRDLQP---VGSGAYGAVCSA-----VDGRTGAK--VAIKKLYRPFQSELFAKRA 71
Query: 130 QSEVNFLGRLSHPNLVRLLGYCWEDKEL------LLVYEFM--QKGSLENHLFGRGASVQ 181
E+ L + H N++ LL D+ L LV FM G L H +Q
Sbjct: 72 YRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQ 131
Query: 182 PLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSA 241
L + + +GL ++H + +I+RD K N+ ++ KI DFGLA+ S
Sbjct: 132 FLVYQM--------LKGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQADSE 181
Query: 242 SQSHVTTRVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
V TR Y APE + Y ++ D++ G ++ E++TG
Sbjct: 182 MXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG 222
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +AVKKL+ +S+ + E+ L + H N
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRG----ASVQPLAWNIRLKIAIGAARGL 199
++ LL + L E L HL G Q L + + RGL
Sbjct: 83 VIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
++H++D +I+RD K SN+ ++ KI D GLA+ +V TR Y AP
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYRAP 191
Query: 260 EYVATGHLYVKS-DVYGFGVVLVEILTG 286
E + Y ++ D++ G ++ E+LTG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +A+KK+ + + + + E+ L H N
Sbjct: 62 IGNGAYGVV-------SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 114
Query: 144 LVRLLGYCW------EDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
++ + E K + +V + M E+ L S QPL R
Sbjct: 115 IIAIKDILRPTVPYGEFKSVYVVLDLM-----ESDLHQIIHSSQPLTLEHVRYFLYQLLR 169
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYG 255
GL ++H++ QVI+RD K SN+L++ + KI DFG+A+ A + T + T
Sbjct: 170 GLKYMHSA--QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 256 YAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + + H Y ++ D++ G + E+L
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + + +G +A+KK+ + + + + E+ L H N
Sbjct: 63 IGNGAYGVV-------SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 115
Query: 144 LVRLLGYC------WEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
++ + E K + +V + M E+ L S QPL R
Sbjct: 116 IIAIKDILRPTVPYGEFKSVYVVLDLM-----ESDLHQIIHSSQPLTLEHVRYFLYQLLR 170
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK--LGPSASQSHVTTRVMGTYG 255
GL ++H++ QVI+RD K SN+L++ + KI DFG+A+ A + T + T
Sbjct: 171 GLKYMHSA--QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 256 YAAPEYVATGHLYVKS-DVYGFGVVLVEILT 285
Y APE + + H Y ++ D++ G + E+L
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 30/243 (12%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R F+ + + G+G FG V G EK+ G S +A+KK+ + E Q +
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLG--KEKSTGMS-----VAIKKVIQDPRFRNRELQI-M 70
Query: 134 NFLGRLSHPNLVRLLGYCW-------EDKELLLVYEFMQKG--SLENHLFGRGASVQPLA 184
L L HPN+V+L Y + D L +V E++ + + R + P+
Sbjct: 71 QDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL 130
Query: 185 WNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILL-DGSYTAKISDFGLA-KLGPSAS 242
+ L I R + LH V +RD K N+L+ + T K+ DFG A KL PS
Sbjct: 131 IKVFLFQLI---RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP 187
Query: 243 Q-SHVTTRVMGTYGYAAPEYV-ATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQ-H 299
+++ +R Y APE + H D++ G + E++ G + +GQ H
Sbjct: 188 NVAYICSRY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLH 242
Query: 300 NLV 302
+V
Sbjct: 243 EIV 245
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 15/216 (6%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
F+ LG G FG+V + K G + ++ +K+ L+ E +E +
Sbjct: 44 FERIRTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKV--VKLKQIEHTLNEKRIQQAV 99
Query: 140 SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
+ P LV+L ++ L +V E+ G + +HL G +P A +I +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 155
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+LH+ D +IYRD K N+L+D K++DFG AK T + GT Y AP
Sbjct: 156 EYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEYLAP 208
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
E + + D + GV++ E+ G ++P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
V+G+G F V + + G+ + ++ V K S E+ + E + L HP++
Sbjct: 31 VIGKGPFSVVRRCI--NRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V LL D L +V+EFM L + R + + + L + H
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH- 147
Query: 205 SDKQVIYRDFKASNILL---DGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGYAAPE 260
D +I+RD K +LL + S K+ FG+A +LG S V +GT + APE
Sbjct: 148 -DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL---VAGGRVGTPHFMAPE 203
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTG 286
V DV+G GV+L +L+G
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 151 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT Y AP + + D + GV++ E+ G ++P
Sbjct: 200 GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
V+G+G F V + + G+ + ++ V K S E+ + E + L HP++
Sbjct: 33 VIGKGPFSVVRRCI--NRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 90
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
V LL D L +V+EFM L + R + + + L + H
Sbjct: 91 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH- 149
Query: 205 SDKQVIYRDFKASNILL---DGSYTAKISDFGLA-KLGPSASQSHVTTRVMGTYGYAAPE 260
D +I+RD K +LL + S K+ FG+A +LG S V +GT + APE
Sbjct: 150 -DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL---VAGGRVGTPHFMAPE 205
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTG 286
V DV+G GV+L +L+G
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 120/278 (43%), Gaps = 47/278 (16%)
Query: 66 RIFTFVEL---------RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVK 116
++F F +L +A + LG G G+V + E+ K + +I+ +
Sbjct: 114 KVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAF--ERKTCKKVAIRIISKR 171
Query: 117 KLNSESLQGFE---EWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHL 173
K S + + ++E+ L +L+HP ++++ + ++ ++ +V E M+ G L + +
Sbjct: 172 KFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV 230
Query: 174 FGRGASVQPLAWNIRLKIAIGA----ARGLAFLHTSDKQVIYRDFKASNILL---DGSYT 226
G N RLK A LA + + +I+RD K N+LL +
Sbjct: 231 VG----------NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL 280
Query: 227 AKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEY---VATGHLYVKSDVYGFGVVLVEI 283
KI+DFG +K+ ++ + + GT Y APE V T D + GV+L
Sbjct: 281 IKITDFGHSKI---LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 337
Query: 284 LTGLRALDTNR---------PSGQHNLVDWIKPYLSEK 312
L+G +R SG++N + + +SEK
Sbjct: 338 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 375
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 130 QSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRL 189
++E+ L RLSHPN+++L E+ LV E + G L + + +G + A +
Sbjct: 96 RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK 155
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG---SYTAKISDFGLAKLGPSASQSHV 246
+I +A+LH + +++RD K N+L KI+DFGL+K+ +
Sbjct: 156 QI----LEAVAYLH--ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI---VEHQVL 206
Query: 247 TTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNR 294
V GT GY APE + + D++ G++ +L G R
Sbjct: 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 120/278 (43%), Gaps = 47/278 (16%)
Query: 66 RIFTFVEL---------RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVK 116
++F F +L +A + LG G G+V + E+ K + +I+ +
Sbjct: 128 KVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAF--ERKTCKKVAIRIISKR 185
Query: 117 KLNSESLQGFE---EWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHL 173
K S + + ++E+ L +L+HP ++++ + ++ ++ +V E M+ G L + +
Sbjct: 186 KFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV 244
Query: 174 FGRGASVQPLAWNIRLKIAIGA----ARGLAFLHTSDKQVIYRDFKASNILL---DGSYT 226
G N RLK A LA + + +I+RD K N+LL +
Sbjct: 245 VG----------NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL 294
Query: 227 AKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEY---VATGHLYVKSDVYGFGVVLVEI 283
KI+DFG +K+ ++ + + GT Y APE V T D + GV+L
Sbjct: 295 IKITDFGHSKI---LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 351
Query: 284 LTGLRALDTNR---------PSGQHNLVDWIKPYLSEK 312
L+G +R SG++N + + +SEK
Sbjct: 352 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 389
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 38/261 (14%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE---EWQ 130
+A + LG G G+V + E+ K + +I+ +K S + + +
Sbjct: 12 KALRDEYIMSKTLGSGACGEVKLAF--ERKTCKKVAIKIISKRKFAIGSAREADPALNVE 69
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
+E+ L +L+HP ++++ + ++ ++ +V E M+ G L + + G N RLK
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG----------NKRLK 118
Query: 191 IAIGA----ARGLAFLHTSDKQVIYRDFKASNILL---DGSYTAKISDFGLAKLGPSASQ 243
A LA + + +I+RD K N+LL + KI+DFG +K+ +
Sbjct: 119 EATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGE 175
Query: 244 SHVTTRVMGTYGYAAPEY---VATGHLYVKSDVYGFGVVLVEILTGLRALDTNR------ 294
+ + + GT Y APE V T D + GV+L L+G +R
Sbjct: 176 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 235
Query: 295 ---PSGQHNLVDWIKPYLSEK 312
SG++N + + +SEK
Sbjct: 236 DQITSGKYNFIPEVWAEVSEK 256
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 44 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P L +L ++ L +V E+ G + +HL G +P A +I +
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT-- 154
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+++D K++DFG AK T + GT Y
Sbjct: 155 --FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEY 205
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 43 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P LV+L ++ L +V E+ G + +HL G +P A +I +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-- 153
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+++D +++DFG AK T + GT Y
Sbjct: 154 --FEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEY 204
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 74 RAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEV 133
R R+ +G+G +G+V++G S G +AVK +S + + ++E+
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRG---------SWQGENVAVKIFSSRDEKSWFR-ETEL 53
Query: 134 NFLGRLSHPNLVRLLGYCWED-------KELLLVYEFMQKGSLENHLFGRGASVQPLAWN 186
L H N+ LG+ D +L L+ + + GSL ++L + L
Sbjct: 54 YNTVMLRHENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTV 105
Query: 187 IRLKIAIGAARGLAFLH-----TSDKQVI-YRDFKASNILLDGSYTAKISDFGLAKL-GP 239
L+I + A GLA LH T K I +RD K+ NIL+ + I+D GLA +
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
Query: 240 SASQSHVTTR-VMGTYGYAAPEY------VATGHLYVKSDVYGFGVVLVEI 283
S +Q V +GT Y APE V Y + D++ FG+VL E+
Sbjct: 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 38/249 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE---EWQSEVNFLGRLSHP 142
LG G G+V + E+ K + +I+ +K S + + ++E+ L +L+HP
Sbjct: 18 LGSGACGEVKLAF--ERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA----ARG 198
++++ + ++ ++ +V E M+ G L + + G N RLK A
Sbjct: 76 CIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG----------NKRLKEATCKLYFYQML 124
Query: 199 LAFLHTSDKQVIYRDFKASNILL---DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYG 255
LA + + +I+RD K N+LL + KI+DFG +K+ ++ + + GT
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPT 181
Query: 256 YAAPEY---VATGHLYVKSDVYGFGVVLVEILTGLRALDTNR---------PSGQHNLVD 303
Y APE V T D + GV+L L+G +R SG++N +
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 304 WIKPYLSEK 312
+ +SEK
Sbjct: 242 EVWAEVSEK 250
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 38/249 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE---EWQSEVNFLGRLSHP 142
LG G G+V + E+ K + +I+ +K S + + ++E+ L +L+HP
Sbjct: 18 LGSGACGEVKLAF--ERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA----ARG 198
++++ + ++ ++ +V E M+ G L + + G N RLK A
Sbjct: 76 CIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG----------NKRLKEATCKLYFYQML 124
Query: 199 LAFLHTSDKQVIYRDFKASNILL---DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYG 255
LA + + +I+RD K N+LL + KI+DFG +K+ ++ + + GT
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPT 181
Query: 256 YAAPEY---VATGHLYVKSDVYGFGVVLVEILTGLRALDTNR---------PSGQHNLVD 303
Y APE V T D + GV+L L+G +R SG++N +
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 304 WIKPYLSEK 312
+ +SEK
Sbjct: 242 EVWAEVSEK 250
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 38/249 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE---EWQSEVNFLGRLSHP 142
LG G G+V + E+ K + +I+ +K S + + ++E+ L +L+HP
Sbjct: 18 LGSGACGEVKLAF--ERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA----ARG 198
++++ + ++ ++ +V E M+ G L + + G N RLK A
Sbjct: 76 CIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG----------NKRLKEATCKLYFYQML 124
Query: 199 LAFLHTSDKQVIYRDFKASNILL---DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYG 255
LA + + +I+RD K N+LL + KI+DFG +K+ ++ + + GT
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPT 181
Query: 256 YAAPEY---VATGHLYVKSDVYGFGVVLVEILTGLRALDTNR---------PSGQHNLVD 303
Y APE V T D + GV+L L+G +R SG++N +
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 304 WIKPYLSEK 312
+ +SEK
Sbjct: 242 EVWAEVSEK 250
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 44 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P L +L ++ L +V E+ G + +HL G +P A +I +
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-- 154
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+++D K++DFG AK T + GT Y
Sbjct: 155 --FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEY 205
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 38/249 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFE---EWQSEVNFLGRLSHP 142
LG G G+V + E+ K + +I+ +K S + + ++E+ L +L+HP
Sbjct: 17 LGSGACGEVKLAF--ERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA----ARG 198
++++ + ++ ++ +V E M+ G L + + G N RLK A
Sbjct: 75 CIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG----------NKRLKEATCKLYFYQML 123
Query: 199 LAFLHTSDKQVIYRDFKASNILL---DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYG 255
LA + + +I+RD K N+LL + KI+DFG +K+ ++ + + GT
Sbjct: 124 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPT 180
Query: 256 YAAPEY---VATGHLYVKSDVYGFGVVLVEILTGLRALDTNR---------PSGQHNLVD 303
Y APE V T D + GV+L L+G +R SG++N +
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 240
Query: 304 WIKPYLSEK 312
+ +SEK
Sbjct: 241 EVWAEVSEK 249
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 21/219 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQSEVNFL 136
F+ LG G FG+V +G A+K L+ + L+ E +E L
Sbjct: 44 FERIKTLGTGSFGRVM-------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 137 GRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAA 196
++ P L +L ++ L +V E+ G + +HL G +P A +I +
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-- 154
Query: 197 RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+LH+ D +IYRD K N+++D K++DFG AK T + GT Y
Sbjct: 155 --FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEY 205
Query: 257 AAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
APE + + D + GV++ E+ G ++P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 39/235 (16%)
Query: 70 FVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEW 129
F+ R R +G+G +G+V++G S G +AVK +S + +
Sbjct: 29 FLVQRTVARQITLLECVGKGRYGEVWRG---------SWQGENVAVKIFSSRDEKSWFR- 78
Query: 130 QSEVNFLGRLSHPNLVRLLGYCWED-------KELLLVYEFMQKGSLENHLFGRGASVQP 182
++E+ L H N+ LG+ D +L L+ + + GSL ++L +
Sbjct: 79 ETELYNTVMLRHENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTT 130
Query: 183 LAWNIRLKIAIGAARGLAFLH-----TSDKQVI-YRDFKASNILLDGSYTAKISDFGLAK 236
L L+I + A GLA LH T K I +RD K+ NIL+ + I+D GLA
Sbjct: 131 LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 190
Query: 237 L-GPSASQSHVTTR-VMGTYGYAAPEY------VATGHLYVKSDVYGFGVVLVEI 283
+ S +Q V +GT Y APE V Y + D++ FG+VL E+
Sbjct: 191 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 73 LRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSE 132
LR A+ +F+ VLG+G FG+V K + A+KK+ + + SE
Sbjct: 2 LRYAS-DFEEIAVLGQGAFGQVVKA-------RNALDSRYYAIKKIR-HTEEKLSTILSE 52
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKE-------------LLLVYEFMQKGSLENHLFGRGAS 179
V L L+H +VR E + L + E+ + +L + + +
Sbjct: 53 VXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLN 112
Query: 180 VQ-PLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-- 236
Q W + +I L+++H+ + +I+R+ K NI +D S KI DFGLAK
Sbjct: 113 QQRDEYWRLFRQIL----EALSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNV 166
Query: 237 -----LGPSASQ-----SHVTTRVMGTYGYAAPEYV-ATGHLYVKSDVYGFGVVLVEIL 284
+ SQ S T +GT Y A E + TGH K D Y G++ E +
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVK---KLNSESLQGFEEWQ-SEV 133
N++ +LG G V + K K + +I V ++E +Q E EV
Sbjct: 17 ENYEPKEILGRGVSSVVRRCI--HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 74
Query: 134 NFLGRLS-HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIA 192
+ L ++S HPN+++L + LV++ M+KG L ++L + L+ KI
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIM 130
Query: 193 IGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRVM 251
+ LH + +++RD K NILLD K++DFG + +L P V
Sbjct: 131 RALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC---- 184
Query: 252 GTYGYAAPEYVATGHL-----YVKS-DVYGFGVVLVEILTG 286
GT Y APE + Y K D++ GV++ +L G
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 30/218 (13%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNF 135
+ + S T +G G +G V +D++ SG +A+KKL+ +S + E+
Sbjct: 42 KTYVSPTHVGSGAYGSVCSA-IDKR------SGEKVAIKKLSRPFQSEIFAKRAYRELLL 94
Query: 136 LGRLSHPNLVRLLGYCWEDKEL------LLVYEFMQKGSLENHLFGRGASVQPLAWNIRL 189
L + H N++ LL L LV FMQ + G S + + +
Sbjct: 95 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDL--QKIMGMEFSEEKIQY---- 148
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
+ +GL ++H++ V++RD K N+ ++ KI DFGLA+ + +V TR
Sbjct: 149 -LVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR 205
Query: 250 VMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
Y APE + + Y ++ D++ G ++ E+LTG
Sbjct: 206 -----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 238
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+G F V + + G+ + +I KKL++ Q E E L HPN+V
Sbjct: 30 LGKGAFSVVRR--CVKVLAGQEYAAKIINTKKLSARDHQKLER---EARICRLLKHPNIV 84
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL E+ L+++ + G L + R + A + +I A LH
Sbjct: 85 RLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL------EAVLHCH 138
Query: 206 DKQVIYRDFKASNILLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
V++RD K N+LL K++DFGLA Q+ GT GY +PE +
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVL 196
Query: 263 ATGHLYVKSDVYGFGVVLVEILTG 286
D++ GV+L +L G
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVG 220
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 21/224 (9%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES---LQGFEEWQS 131
A F LG G FG+V SG A+K L+ + L+ E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVM-------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
E L ++ P LV+L ++ L +V E++ G + +HL G +P A +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM 251
+ +LH+ D +IYRD K N+L+D +++DFG AK T +
Sbjct: 151 VLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 252 GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRP 295
GT APE + + D + GV++ E+ G ++P
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 30/218 (13%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNF 135
+ + S T +G G +G V +D++ SG +A+KKL+ +S + E+
Sbjct: 24 KTYVSPTHVGSGAYGSVCSA-IDKR------SGEKVAIKKLSRPFQSEIFAKRAYRELLL 76
Query: 136 LGRLSHPNLVRLLGYCWEDKEL------LLVYEFMQKGSLENHLFGRGASVQPLAWNIRL 189
L + H N++ LL L LV FMQ + G S + + +
Sbjct: 77 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDL--QKIMGLKFSEEKIQY---- 130
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
+ +GL ++H++ V++RD K N+ ++ KI DFGLA+ + +V TR
Sbjct: 131 -LVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR 187
Query: 250 VMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
Y APE + + Y ++ D++ G ++ E+LTG
Sbjct: 188 -----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 220
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 25/187 (13%)
Query: 108 GSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLS-HPNLVRLLGYCWEDKELLLVYEFMQK 166
GS + V++L +L+ EV+ L ++S HPN+++L + LV++ M+K
Sbjct: 43 GSFSAEEVQELREATLK-------EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK 95
Query: 167 GSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYT 226
G L ++L + L+ KI + LH + +++RD K NILLD
Sbjct: 96 GELFDYLTEKVT----LSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMN 149
Query: 227 AKISDFGLA-KLGPSASQSHVTTRVMGTYGYAAPEYVATGHL-----YVKS-DVYGFGVV 279
K++DFG + +L P V GT Y APE + Y K D++ GV+
Sbjct: 150 IKLTDFGFSCQLDPGEKLREVC----GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 205
Query: 280 LVEILTG 286
+ +L G
Sbjct: 206 MYTLLAG 212
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 24/223 (10%)
Query: 72 ELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS 131
+LR +++ V+G G FG+V + K+ K + +++ ++ S F +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWE 123
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAW----NI 187
E + + + P +V+L +D+ L +V E+M G L N + P W
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV---PEKWARFYTA 180
Query: 188 RLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVT 247
+ +A+ A + F+H RD K N+LLD S K++DFG
Sbjct: 181 EVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 232
Query: 248 TRVMGTYGYAAPEYVAT----GHLYVKSDVYGFGVVLVEILTG 286
T V GT Y +PE + + G+ + D + GV L E+L G
Sbjct: 233 TAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVK---KLNSESLQGFEEWQ-SEVN 134
N++ +LG G V + K K + +I V ++E +Q E EV+
Sbjct: 18 NYEPKEILGRGVSSVVRRCI--HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 135 FLGRLS-HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
L ++S HPN+++L + LV++ M+KG L ++L + L+ KI
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIMR 131
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLA-KLGPSASQSHVTTRVMG 252
+ LH + +++RD K NILLD K++DFG + +L P V G
Sbjct: 132 ALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC----G 185
Query: 253 TYGYAAPEYVATGHL-----YVKS-DVYGFGVVLVEILTG 286
T Y APE + Y K D++ GV++ +L G
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 24/223 (10%)
Query: 72 ELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS 131
+LR +++ V+G G FG+V + K+ K + +++ ++ S F +
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWE 118
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAW----NI 187
E + + + P +V+L +D+ L +V E+M G L N + P W
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV---PEKWARFYTA 175
Query: 188 RLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVT 247
+ +A+ A + F+H RD K N+LLD S K++DFG
Sbjct: 176 EVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 227
Query: 248 TRVMGTYGYAAPEYVAT----GHLYVKSDVYGFGVVLVEILTG 286
T V GT Y +PE + + G+ + D + GV L E+L G
Sbjct: 228 TAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 76/181 (41%), Gaps = 17/181 (9%)
Query: 113 IAVKKLNSESLQGFEEW----QSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGS 168
I KL SE+L + Q E GRL P++V + + D +L + +
Sbjct: 61 IVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVD 120
Query: 169 LENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAK 228
L L +G P A I +I G A +RD K NIL+ A
Sbjct: 121 LAAXLRRQGPLAPPRAVAIVRQI------GSALDAAHAAGATHRDVKPENILVSADDFAY 174
Query: 229 ISDFGLAKLGPSASQSHVTTRV---MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
+ DFG+A SA+ T++ +GT Y APE + H ++D+Y VL E LT
Sbjct: 175 LVDFGIA----SATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLT 230
Query: 286 G 286
G
Sbjct: 231 G 231
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 24/223 (10%)
Query: 72 ELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS 131
+LR +++ V+G G FG+V + K+ K + +++ ++ S F +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWE 123
Query: 132 EVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAW----NI 187
E + + + P +V+L +D+ L +V E+M G L N + P W
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV---PEKWARFYTA 180
Query: 188 RLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVT 247
+ +A+ A + F+H RD K N+LLD S K++DFG
Sbjct: 181 EVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 232
Query: 248 TRVMGTYGYAAPEYVAT----GHLYVKSDVYGFGVVLVEILTG 286
T V GT Y +PE + + G+ + D + GV L E+L G
Sbjct: 233 TAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 117/304 (38%), Gaps = 70/304 (23%)
Query: 75 AATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS--- 131
A ++ +LG+GGFG VF G + +A+K + + G+
Sbjct: 28 AFEAEYRLGPLLGKGGFGTVFAG-------HRLTDRLQVAIKVIPRNRVLGWSPLSDSVT 80
Query: 132 ---EVNFLGRLS----HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLA 184
EV L ++ HP ++RLL + + +LV E R Q L
Sbjct: 81 CPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLE-------------RPLPAQDLF 127
Query: 185 WNIRLKIAIGAARGLAFL--------HTSDKQVIYRDFKASNILLDGSY-TAKISDFGLA 235
I K +G F H + V++RD K NIL+D AK+ DFG
Sbjct: 128 DYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSG 187
Query: 236 KLGPSASQSHVTTRVMGTYGYAAPEYVATGHLY--VKSDVYGFGVVLVEILTGLRALDTN 293
L T GT Y+ PE+++ H Y + + V+ G++L +++ G + +
Sbjct: 188 AL----LHDEPYTDFDGTRVYSPPEWISR-HQYHALPATVWSLGILLYDMVCGDIPFERD 242
Query: 294 RPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSM 353
+ I++A L +P + L +CL +P RPS+
Sbjct: 243 ----------------------QEILEAEL--HFPAHVSPDCCALIRRCLAPKPSSRPSL 278
Query: 354 REVV 357
E++
Sbjct: 279 EEIL 282
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 137/324 (42%), Gaps = 48/324 (14%)
Query: 52 ESYPNGQILPTPNLRIFTFVELRAATRNF--KSDTV-----LGEGGFGKVFKGWLDEKAP 104
E++ Q TP + + + +NF K+D + LG G +G V K P
Sbjct: 18 EAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKM---RHVP 74
Query: 105 GKSGSGTVIAVKKLNSESLQGFEEWQSEVNF---LGRLSHPNLVRLLGYCWEDKELLLVY 161
SG ++AVK++ + ++ E+ + ++ + + P V G + + ++ +
Sbjct: 75 ----SGQIMAVKRIRA-TVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129
Query: 162 EFMQKG--SLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNI 219
E M + +G Q + +I KIA+ + L LH S VI+RD K SN+
Sbjct: 130 ELMDTSLDKFYKQVIDKG---QTIPEDILGKIAVSIVKALEHLH-SKLSVIHRDVKPSNV 185
Query: 220 LLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV-----ATGHLYVKSDVY 274
L++ K+ DFG++ S T G Y APE + G+ VKSD++
Sbjct: 186 LINALGQVKMCDFGISGY---LVDSVAKTIDAGCKPYMAPERINPELNQKGY-SVKSDIW 241
Query: 275 GFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQ 334
G+ ++E+ D+ W P+ ++ + +++ K + +
Sbjct: 242 SLGITMIELAILRFPYDS-----------WGTPF----QQLKQVVEEPSPQLPADKFSAE 286
Query: 335 IAQLSLKCLEAEPKHRPSMREVVE 358
+ +CL+ K RP+ E+++
Sbjct: 287 FVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 24/222 (10%)
Query: 73 LRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSE 132
L+ ++ V+G G FG+V + KA K + +++ ++ S F + E
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEV--QLVRHKASQKVYAMKLLSKFEMIKRSDSAF--FWEE 125
Query: 133 VNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAW----NIR 188
+ + + P +V+L +DK L +V E+M G L N + P W
Sbjct: 126 RDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDV---PEKWAKFYTAE 182
Query: 189 LKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTT 248
+ +A+ A + +H RD K N+LLD K++DFG H T
Sbjct: 183 VVLALDAIHSMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT 234
Query: 249 RVMGTYGYAAPEYVAT----GHLYVKSDVYGFGVVLVEILTG 286
V GT Y +PE + + G+ + D + GV L E+L G
Sbjct: 235 AV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 46/238 (19%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES-LQGFE-EWQSEVNFLGRLSHPN 143
+G+G FG+VFK +G +A+KK+ E+ +GF E+ L L H N
Sbjct: 26 IGQGTFGEVFKA-------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 144 LVRLLGYCWEDKE--------LLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
+V L+ C + LV++F E+ L G L N+ +K +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDF-----CEHDLAG-------LLSNVLVKFTLSE 126
Query: 196 AR--------GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK---LGPSASQS 244
+ GL ++H + ++++RD KA+N+L+ K++DFGLA+ L ++ +
Sbjct: 127 IKRVMQMLLNGLYYIHRN--KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 245 HVTTRVMGTYGYAAPEYVATGHLY-VKSDVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
RV+ T Y PE + Y D++G G ++ E+ T + N + QH L
Sbjct: 185 RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN--TEQHQL 239
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG+G F V + + G+ + +I KKL++ Q E E L HPN+V
Sbjct: 19 LGKGAFSVVRR--CVKVLAGQEYAAMIINTKKLSARDHQKLER---EARICRLLKHPNIV 73
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL E+ L+++ + G L + R + A + +I A LH
Sbjct: 74 RLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL------EAVLHCH 127
Query: 206 DKQVIYRDFKASNILLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
V++R+ K N+LL K++DFGLA Q+ GT GY +PE +
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVL 185
Query: 263 ATGHLYVKSDVYGFGVVLVEILTG 286
D++ GV+L +L G
Sbjct: 186 RKDPYGKPVDLWACGVILYILLVG 209
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 209 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRK 314
+ APE + ++SDV+ FGV+L EI + L P + +
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------------LGASPYPGVKIDEE 311
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL-ERLQASDQK 369
F + + + P ++ Q L C EP RP+ E+VE L LQA+ Q+
Sbjct: 312 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 367
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 35/213 (16%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + D + K +AVKKL+ +SL E+ L L H N
Sbjct: 28 VGSGAYGSVCSAY-DARLRQK------VAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 80
Query: 144 LVRLL-----GYCWED-KELLLVYEFMQKGSLENHLFGRGAS---VQPLAWNIRLKIAIG 194
++ LL ED E+ LV M L N + + S VQ L + +
Sbjct: 81 VIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDEHVQFLVYQL------- 132
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
RGL ++H++ +I+RD K SN+ ++ +I DFGLA+ +V TR
Sbjct: 133 -LRGLKYIHSAG--IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR----- 184
Query: 255 GYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
Y APE + Y ++ D++ G ++ E+L G
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 217
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 207 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRK 314
+ APE + ++SDV+ FGV+L EI + L P + +
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------------LGASPYPGVKIDEE 309
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL-ERLQASDQK 369
F + + + P ++ Q L C EP RP+ E+VE L LQA+ Q+
Sbjct: 310 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 365
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 35/213 (16%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + D + K +AVKKL+ +SL E+ L L H N
Sbjct: 36 VGSGAYGSVCSAY-DARLRQK------VAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 144 LVRLL-----GYCWED-KELLLVYEFMQKGSLENHLFGRGAS---VQPLAWNIRLKIAIG 194
++ LL ED E+ LV M L N + + S VQ L + +
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALSDEHVQFLVYQL------- 140
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
RGL ++H++ +I+RD K SN+ ++ +I DFGLA+ +V TR
Sbjct: 141 -LRGLKYIHSAG--IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR----- 192
Query: 255 GYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
Y APE + Y ++ D++ G ++ E+L G
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 39/220 (17%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
+G+G +G+V++G S G +AVK +S + + ++E+ L H N+
Sbjct: 15 CVGKGRYGEVWRG---------SWQGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENI 64
Query: 145 VRLLGYCWED-------KELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAAR 197
LG+ D +L L+ + + GSL ++L + L L+I + A
Sbjct: 65 ---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIAS 116
Query: 198 GLAFLH-----TSDKQVI-YRDFKASNILLDGSYTAKISDFGLAKL-GPSASQSHVTTR- 249
GLA LH T K I +RD K+ NIL+ + I+D GLA + S +Q V
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 250 VMGTYGYAAPEY------VATGHLYVKSDVYGFGVVLVEI 283
+GT Y APE V Y + D++ FG+VL E+
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 36/233 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES-LQGFE-EWQSEVNFLGRLSHPN 143
+G+G FG+VFK +G +A+KK+ E+ +GF E+ L L H N
Sbjct: 25 IGQGTFGEVFKA-------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 144 LVRLLGYCWEDKE--------LLLVYEFMQ---KGSLENHLFGRGASVQPLAWNIRLKIA 192
+V L+ C + LV++F + G L N L S + L
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN-- 135
Query: 193 IGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK---LGPSASQSHVTTR 249
GL ++H + ++++RD KA+N+L+ K++DFGLA+ L ++ + R
Sbjct: 136 -----GLYYIHRN--KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 188
Query: 250 VMGTYGYAAPEYVATGHLY-VKSDVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
V+ T Y PE + Y D++G G ++ E+ T + N + QH L
Sbjct: 189 VV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN--TEQHQL 238
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 35/213 (16%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPN 143
+G G +G V + D + K +AVKKL+ +SL E+ L L H N
Sbjct: 36 VGSGAYGSVCSAY-DARLRQK------VAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 144 LVRLL-----GYCWED-KELLLVYEFMQKGSLENHLFGRGAS---VQPLAWNIRLKIAIG 194
++ LL ED E+ LV M L N + + S VQ L + +
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDEHVQFLVYQL------- 140
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
RGL ++H++ +I+RD K SN+ ++ +I DFGLA+ +V TR
Sbjct: 141 -LRGLKYIHSAG--IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR----- 192
Query: 255 GYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
Y APE + Y ++ D++ G ++ E+L G
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 18/175 (10%)
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 202 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRK 314
+ APE + ++SDV+ FGV+L EI + L P + +
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------------LGASPYPGVKIDEE 304
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETL-ERLQASDQ 368
F + + + P ++ Q L C EP RP+ E+VE L LQA+ Q
Sbjct: 305 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 359
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 36/233 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES-LQGFE-EWQSEVNFLGRLSHPN 143
+G+G FG+VFK +G +A+KK+ E+ +GF E+ L L H N
Sbjct: 26 IGQGTFGEVFKA-------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 144 LVRLLGYCWEDKE--------LLLVYEFMQ---KGSLENHLFGRGASVQPLAWNIRLKIA 192
+V L+ C + LV++F + G L N L S + L
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN-- 136
Query: 193 IGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK---LGPSASQSHVTTR 249
GL ++H + ++++RD KA+N+L+ K++DFGLA+ L ++ + R
Sbjct: 137 -----GLYYIHRN--KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 250 VMGTYGYAAPEYVATGHLY-VKSDVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
V+ T Y PE + Y D++G G ++ E+ T + N + QH L
Sbjct: 190 VV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN--TEQHQL 239
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 36/233 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSES-LQGFE-EWQSEVNFLGRLSHPN 143
+G+G FG+VFK +G +A+KK+ E+ +GF E+ L L H N
Sbjct: 26 IGQGTFGEVFKA-------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 144 LVRLLGYCWEDKE--------LLLVYEFMQ---KGSLENHLFGRGASVQPLAWNIRLKIA 192
+V L+ C + LV++F + G L N L S + L
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN-- 136
Query: 193 IGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK---LGPSASQSHVTTR 249
GL ++H + ++++RD KA+N+L+ K++DFGLA+ L ++ + R
Sbjct: 137 -----GLYYIHRN--KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 250 VMGTYGYAAPEYVATGHLY-VKSDVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
V+ T Y PE + Y D++G G ++ E+ T + N + QH L
Sbjct: 190 VV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN--TEQHQL 239
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 110/279 (39%), Gaps = 42/279 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
+G G FG V + D++ S ++AVK + E + E + E+ L HPN+
Sbjct: 26 IGSGNFG-VARLMRDKQ------SNELVAVKYIERGEKID--ENVKREIINHRSLRHPNI 76
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
VR L +V E+ G L + G + A ++ G+++ H
Sbjct: 77 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI----SGVSYCHA 132
Query: 205 SDKQVIYRDFKASNILLDGSYTA--KISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
QV +RD K N LLDGS KI DFG +K SQ T +GT Y APE +
Sbjct: 133 --MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVL 187
Query: 263 ATGHLYVK-SDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
K +DV+ GV L +L G + E + FR I
Sbjct: 188 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE----------------EPKNFRKTIHR 231
Query: 322 RLQGQYPYKAAYQIA----QLSLKCLEAEPKHRPSMREV 356
L QY I+ L + A+P R S+ E+
Sbjct: 232 ILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 270
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G +G+V +K G + +I + + S G EV L +L HPN++
Sbjct: 12 LGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSG--ALLDEVAVLKQLDHPNIM 67
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+L + + + LV E + G L + + R + A I ++ G +LH
Sbjct: 68 KLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV----LSGTTYLHKH 123
Query: 206 DKQVIYRDFKASNILLDG---SYTAKISDFGLA---KLGPSASQSHVTTRVMGTYGYAAP 259
+ +++RD K N+LL+ KI DFGL+ ++G + +GT Y AP
Sbjct: 124 N--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER------LGTAYYIAP 175
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V K DV+ GV+L +L G
Sbjct: 176 E-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G +G+V +K G + +I + + S G EV L +L HPN++
Sbjct: 29 LGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSG--ALLDEVAVLKQLDHPNIM 84
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
+L + + + LV E + G L + + R + A I ++ G +LH
Sbjct: 85 KLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV----LSGTTYLHKH 140
Query: 206 DKQVIYRDFKASNILLDG---SYTAKISDFGLA---KLGPSASQSHVTTRVMGTYGYAAP 259
+ +++RD K N+LL+ KI DFGL+ ++G + +GT Y AP
Sbjct: 141 N--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER------LGTAYYIAP 192
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V K DV+ GV+L +L G
Sbjct: 193 E-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I K+ + S +G EE + EV+ L ++ HPN
Sbjct: 20 LGSGQFAIVKK--CREKSTGLEYAAKFIK-KRQSRASRRGVCREEIEREVSILRQVLHPN 76
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A + +I G+ +LH
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI----LDGVNYLH 132
Query: 204 TSDKQVIYRDFKASNI-LLDGSYT---AKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
T K++ + D K NI LLD + K+ DFGLA + + GT + AP
Sbjct: 133 T--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAP 187
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 32/218 (14%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG GG G VF +D + +A+KK+ Q + E+ + RL H N+V
Sbjct: 19 LGCGGNGLVFSA-VDNDCDKR------VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIV 71
Query: 146 RL--------------LGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKI 191
++ +G E + +V E+M+ L N + +G ++ A ++
Sbjct: 72 KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLAN-VLEQGPLLEEHARLFMYQL 129
Query: 192 AIGAARGLAFLHTSDKQVIYRDFKASNILLDG-SYTAKISDFGLAK-LGPSASQSHVTTR 249
RGL ++H+++ V++RD K +N+ ++ KI DFGLA+ + P S +
Sbjct: 130 ----LRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 250 VMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
+ T Y +P + + + Y K+ D++ G + E+LTG
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 21/243 (8%)
Query: 48 SSGDES-YPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGK 106
SSG E+ Y G + TP + F + + ++ LG G +G+V +K
Sbjct: 8 SSGRENLYFQGDLQATPGM--FITSKKGHLSEMYQRVKKLGSGAYGEVL--LCRDKVTHV 63
Query: 107 SGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQK 166
+ +I +++ S E EV L L HPN+++L + + + LV E +
Sbjct: 64 ERAIKIIRKTSVSTSSNSKLLE---EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG 120
Query: 167 GSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG--- 223
G L + + R + A I ++ G+ +LH + +++RD K N+LL+
Sbjct: 121 GELFDEIIHRMKFNEVDAAVIIKQV----LSGVTYLHKHN--IVHRDLKPENLLLESKEK 174
Query: 224 SYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEI 283
KI DFGL+ + +Q + R +GT Y APE V K DV+ GV+L +
Sbjct: 175 DALIKIVDFGLSAVFE--NQKKMKER-LGTAYYIAPE-VLRKKYDEKCDVWSIGVILFIL 230
Query: 284 LTG 286
L G
Sbjct: 231 LAG 233
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 22/208 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLS-H 141
D LGEG F + + + +K S AVK + S+ ++ Q E+ L H
Sbjct: 16 DKPLGEGSFS-ICRKCVHKK------SNQAFAVKII-SKRMEA--NTQKEITALKLCEGH 65
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAF 201
PN+V+L + LV E + G L + + + A I K+ +
Sbjct: 66 PNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS----- 120
Query: 202 LHTSDKQVIYRDFKASNILL---DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
H D V++RD K N+L + + KI DFG A+L P +Q T T YAA
Sbjct: 121 -HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAA 177
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTG 286
PE + D++ GV+L +L+G
Sbjct: 178 PELLNQNGYDESCDLWSLGVILYTMLSG 205
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I ++ S S +G E+ + EV+ L + HPN
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKS-SRRGVSREDIEREVSILKEIQHPN 75
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLH 131
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ Q+ + D K NI LLD + KI DFGLA ++ + GT + AP
Sbjct: 132 SL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPAFVAP 186
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 17/169 (10%)
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTY 254
A+G+ FL + ++ I+RD A NILL KI DFGLA+
Sbjct: 200 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 255 GYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRK 314
+ APE + ++SDV+ FGV+L EI + L P + +
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------------LGASPYPGVKIDEE 302
Query: 315 FRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERL 363
F + + + P ++ Q L C EP RP+ E+VE L L
Sbjct: 303 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 128/319 (40%), Gaps = 58/319 (18%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL--SHPN 143
LGEG FGKV + +D KA G+ +AVK + + + E +SE+ L L + PN
Sbjct: 22 LGEGAFGKVVEC-IDHKAGGRH-----VAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPN 74
Query: 144 ----LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
V++L + + +V+E + L + F + P + K+A + +
Sbjct: 75 STFRCVQMLEWFEHHGHICIVFELL---GLSTYDFIKENGFLPFRLDHIRKMAYQICKSV 131
Query: 200 AFLHTSDKQVIYRDFKASNILLDGS-----YTAKIS---------DFGLAKLGPSASQSH 245
FLH++ ++ + D K NIL S Y KI D + G +
Sbjct: 132 NFLHSN--KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE 189
Query: 246 VTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWI 305
+ ++ T Y APE + DV+ G +L+E G T+ +++ I
Sbjct: 190 HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 306 -----KPYLSEKRKFRHIIDARLQ-------GQYPYKAAYQIAQLSL------------- 340
K + + RK ++ RL G+Y +A + + L
Sbjct: 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLI 309
Query: 341 -KCLEAEPKHRPSMREVVE 358
K LE +P R ++RE ++
Sbjct: 310 QKMLEYDPAKRITLREALK 328
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V + +++K +G AVKK+ E + E+ L+ P +V
Sbjct: 101 LGRGSFGEVHR--MEDKQ-----TGFQCAVKKVRLEVFRA-----EELMACAGLTSPRIV 148
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
L G E + + E ++ GSL + +G L + L A GL +LH+
Sbjct: 149 PLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC----LPEDRALYYLGQALEGLEYLHS- 203
Query: 206 DKQVIYRDFKASNILL--DGSYTAKISDFGLA-KLGPSASQSHVTT--RVMGTYGYAAPE 260
+++++ D KA N+LL DGS+ A + DFG A L P + T + GT + APE
Sbjct: 204 -RRILHGDVKADNVLLSSDGSHAA-LCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPE 261
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTGL 287
V K DV+ +++ +L G
Sbjct: 262 VVLGRSCDAKVDVWSSCCMMLHMLNGC 288
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 114/294 (38%), Gaps = 53/294 (18%)
Query: 84 TVLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHP 142
T L E G+++KG W G+ V+ V K+ S + ++ E L SHP
Sbjct: 16 TKLNENHSGELWKGRW--------QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 143 NLVRLLGYCWEDK--ELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
N++ +LG C L+ + GSL N L V + + +K A+ ARG A
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFV--VDQSQAVKFALDXARGXA 125
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPE 260
FLHT + + + ++ +D TA+I S + V AP
Sbjct: 126 FLHTLEPLIPRHALNSRSVXIDEDXTARI------------SXADVKFSFQSPGRXYAPA 173
Query: 261 YVATGHLYVK--------SDVYGFGVVLVEILTGLRALD--TNRPSGQHNLVDWIKPYLS 310
+VA L K +D + F V+L E++T +N G ++ ++P +
Sbjct: 174 WVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTI- 232
Query: 311 EKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQ 364
P + +++L C +P RP +V LE+ Q
Sbjct: 233 -----------------PPGISPHVSKLXKICXNEDPAKRPKFDXIVPILEKXQ 269
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 87/225 (38%), Gaps = 32/225 (14%)
Query: 139 LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARG 198
L HPN+VR L +V E+ G L + G + A ++ G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI----SG 127
Query: 199 LAFLHTSDKQVIYRDFKASNILLDGSYTA--KISDFGLAKLGPSASQSHVTTRVMGTYGY 256
+++ H QV +RD K N LLDGS KI DFG +K SQ T +GT Y
Sbjct: 128 VSYCHA--MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAY 182
Query: 257 AAPEYVATGHLYVK-SDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKF 315
APE + K +DV+ GV L +L G + E + F
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE----------------EPKNF 226
Query: 316 RHIIDARLQGQYPYKAAYQIA----QLSLKCLEAEPKHRPSMREV 356
R I L QY I+ L + A+P R S+ E+
Sbjct: 227 RKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
LG G FG+V + +++K +G AVKK+ E + E+ L+ P +V
Sbjct: 82 LGRGSFGEVHR--MEDKQ-----TGFQCAVKKVRLEVFRA-----EELMACAGLTSPRIV 129
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
L G E + + E ++ GSL + +G L + L A GL +LH+
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC----LPEDRALYYLGQALEGLEYLHS- 184
Query: 206 DKQVIYRDFKASNILL--DGSYTAKISDFGLA-KLGPSASQSHVTT--RVMGTYGYAAPE 260
+++++ D KA N+LL DGS+ A + DFG A L P + T + GT + APE
Sbjct: 185 -RRILHGDVKADNVLLSSDGSHAA-LCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPE 242
Query: 261 YVATGHLYVKSDVYGFGVVLVEILTGL 287
V K DV+ +++ +L G
Sbjct: 243 VVLGRSCDAKVDVWSSCCMMLHMLNGC 269
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 71/163 (43%), Gaps = 12/163 (7%)
Query: 127 EEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWN 186
E Q E+ L HPN+VR L ++ E+ G L + G + A
Sbjct: 61 ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARF 120
Query: 187 IRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTA--KISDFGLAKLGPSASQS 244
++ G+++ H+ Q+ +RD K N LLDGS KI DFG +K SQ
Sbjct: 121 FFQQLL----SGVSYCHS--MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 174
Query: 245 HVTTRVMGTYGYAAPEYVATGHLYVK-SDVYGFGVVLVEILTG 286
T +GT Y APE + K +DV+ GV L +L G
Sbjct: 175 KST---VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 28/211 (13%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNF-----LGRLS 140
+G G G+V+K + +G VIAVK++ G +E + L
Sbjct: 33 MGSGTCGQVWKMRFRK-------TGHVIAVKQMRR---SGNKEENKRILMDLDVVLKSHD 82
Query: 141 HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
P +V+ G + ++ + E M G+ L R P+ I K+ + + L
Sbjct: 83 CPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQG--PIPERILGKMTVAIVKALY 138
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPE 260
+L VI+RD K SNILLD K+ DFG++ R G Y APE
Sbjct: 139 YLKEK-HGVIHRDVKPSNILLDERGQIKLCDFGISG---RLVDDKAKDRSAGCAAYMAPE 194
Query: 261 YV----ATGHLY-VKSDVYGFGVVLVEILTG 286
+ T Y +++DV+ G+ LVE+ TG
Sbjct: 195 RIDPPDPTKPDYDIRADVWSLGISLVELATG 225
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I ++ S S +G E+ + EV+ L + HPN
Sbjct: 18 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKS-SRRGVSREDIEREVSILKEIQHPN 74
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLH 130
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ Q+ + D K NI LLD + KI DFGLA ++ + GT + AP
Sbjct: 131 SL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAP 185
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 186 EIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I ++ S S +G E+ + EV+ L + HPN
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKS-SRRGVSREDIEREVSILKEIQHPN 75
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLH 131
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ Q+ + D K NI LLD + KI DFGLA ++ + GT + AP
Sbjct: 132 SL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAP 186
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I ++ S S +G E+ + EV+ L + HPN
Sbjct: 19 LGSGKFAVVKK--CREKSTGLQYAAKFIKKRRTKS-SRRGVSREDIEREVSILKEIQHPN 75
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLH 131
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ Q+ + D K NI LLD + KI DFGLA ++ + GT + AP
Sbjct: 132 SL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAP 186
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I ++ S S +G E+ + EV+ L + HPN
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKS-SRRGVSREDIEREVSILKEIQHPN 75
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLH 131
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ Q+ + D K NI LLD + KI DFGLA ++ + GT + AP
Sbjct: 132 SL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAP 186
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I ++ S S +G E+ + EV+ L + HPN
Sbjct: 18 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKS-SRRGVSREDIEREVSILKEIQHPN 74
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLH 130
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ Q+ + D K NI LLD + KI DFGLA ++ + GT + AP
Sbjct: 131 SL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAP 185
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 186 EIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I ++ S S +G E+ + EV+ L + HPN
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKS-SRRGVSREDIEREVSILKEIQHPN 75
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLH 131
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ Q+ + D K NI LLD + KI DFGLA ++ + GT + AP
Sbjct: 132 SL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAP 186
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I ++ S S +G E+ + EV+ L + HPN
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKS-SRRGVSREDIEREVSILKEIQHPN 75
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLH 131
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ Q+ + D K NI LLD + KI DFGLA ++ + GT + AP
Sbjct: 132 SL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAP 186
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 110/279 (39%), Gaps = 42/279 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
+G G FG V + D++A ++AVK + E + E + E+ L HPN+
Sbjct: 27 IGAGNFG-VARLMRDKQA------NELVAVKYIERGEKID--ENVKREIINHRSLRHPNI 77
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
VR L +V E+ G L + G + A ++ G+++ H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI----SGVSYAHA 133
Query: 205 SDKQVIYRDFKASNILLDGSYTA--KISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
QV +RD K N LLDGS KI+DFG +K SQ +GT Y APE +
Sbjct: 134 --MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP---KSAVGTPAYIAPEVL 188
Query: 263 ATGHLYVK-SDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
K +DV+ GV L +L G + E + FR I
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP----------------EEPKNFRKTIHR 232
Query: 322 RLQGQYPYKAAYQIA----QLSLKCLEAEPKHRPSMREV 356
L QY I+ L + A+P R S+ E+
Sbjct: 233 ILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I ++ S S +G E+ + EV+ L + HPN
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKS-SRRGVSREDIEREVSILKEIQHPN 75
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLH 131
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ Q+ + D K NI LLD + KI DFGLA ++ + GT + AP
Sbjct: 132 SL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAP 186
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I ++ S S +G E+ + EV+ L + HPN
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKS-SRRGVSREDIEREVSILKEIQHPN 75
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLH 131
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ Q+ + D K NI LLD + KI DFGLA ++ + GT + AP
Sbjct: 132 SL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAP 186
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I ++ S S +G E+ + EV+ L + HPN
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKS-SRRGVSREDIEREVSILKEIQHPN 75
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLH 131
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ Q+ + D K NI LLD + KI DFGLA ++ + GT + AP
Sbjct: 132 SL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAP 186
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I ++ S S +G E+ + EV+ L + HPN
Sbjct: 19 LGSGVFAVVKK--CREKSTGLQYAAKFIKKRRTKS-SRRGVSREDIEREVSILKEIQHPN 75
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLH 131
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ Q+ + D K NI LLD + KI DFGLA ++ + GT + AP
Sbjct: 132 SL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAP 186
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I ++ S S +G E+ + EV+ L + HPN
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKS-SRRGVSREDIEREVSILKEIQHPN 75
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLH 131
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ Q+ + D K NI LLD + KI DFGLA ++ + GT + AP
Sbjct: 132 SL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAP 186
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 52/290 (17%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL--QGFEEWQSEVNFLGRLSH-- 141
+G GG KVF+ L+EK + A+K +N E Q + +++E+ +L +L
Sbjct: 64 IGSGGSSKVFQ-VLNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLE-NHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
++RL Y D+ +Y M+ G+++ N + S+ P K + A
Sbjct: 116 DKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA----- 167
Query: 201 FLHTSDKQ-VIYRDFKASNILL-DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+HT + +++ D K +N L+ DG K+ DFG+A + S V +GT Y
Sbjct: 168 -VHTIHQHGIVHSDLKPANFLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 224
Query: 259 PEYV-----------ATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
PE + + + KSDV+ G +L + G P Q
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG------KTPFQQ--------- 269
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVV 357
+++ K IID + ++P + + CL+ +PK R S+ E++
Sbjct: 270 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 120/283 (42%), Gaps = 41/283 (14%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNF---LGRLSHP 142
LG G +G V K P SG ++AVK++ + ++ E+ + ++ + + P
Sbjct: 15 LGRGAYGVVEKM---RHVP----SGQIMAVKRIRA-TVNSQEQKRLLMDLDISMRTVDCP 66
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKG--SLENHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
V G + + ++ + E M + +G Q + +I KIA+ + L
Sbjct: 67 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKG---QTIPEDILGKIAVSIVKALE 123
Query: 201 FLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPE 260
LH S VI+RD K SN+L++ K+ DFG++ + G Y APE
Sbjct: 124 HLH-SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAPE 179
Query: 261 YV-----ATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKF 315
+ G+ VKSD++ G+ ++E+ D+ W P+ ++
Sbjct: 180 RINPELNQKGY-SVKSDIWSLGITMIELAILRFPYDS-----------WGTPF----QQL 223
Query: 316 RHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
+ +++ K + + + +CL+ K RP+ E+++
Sbjct: 224 KQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 84/204 (41%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLV 145
+G+G F V + + G + +I KKL++ Q E E L H N+V
Sbjct: 12 IGKGAFSVVRR--CVKLCTGHEYAAKIINTKKLSARDHQKLER---EARICRLLKHSNIV 66
Query: 146 RLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTS 205
RL E+ LV++ + G L + R + A + +I A LH
Sbjct: 67 RLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQIL------EAVLHCH 120
Query: 206 DKQVIYRDFKASNILLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
V++RD K N+LL K++DFGLA Q+ GT GY +PE +
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEVL 178
Query: 263 ATGHLYVKSDVYGFGVVLVEILTG 286
D++ GV+L +L G
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVG 202
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 52/290 (17%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL--QGFEEWQSEVNFLGRLSH-- 141
+G GG KVF+ L+EK + A+K +N E Q + +++E+ +L +L
Sbjct: 20 IGSGGSSKVFQV-LNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 71
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLE-NHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
++RL Y D+ +Y M+ G+++ N + S+ P K + A
Sbjct: 72 DKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA----- 123
Query: 201 FLHTSDKQ-VIYRDFKASNILL-DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+HT + +++ D K +N L+ DG K+ DFG+A + S V +GT Y
Sbjct: 124 -VHTIHQHGIVHSDLKPANFLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 180
Query: 259 PEYV-----------ATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
PE + + + KSDV+ G +L + G P Q
Sbjct: 181 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG------KTPFQQ--------- 225
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVV 357
+++ K IID + ++P + + CL+ +PK R S+ E++
Sbjct: 226 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 52/290 (17%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL--QGFEEWQSEVNFLGRLSH-- 141
+G GG KVF+ L+EK + A+K +N E Q + +++E+ +L +L
Sbjct: 36 IGSGGSSKVFQV-LNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLE-NHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
++RL Y D+ +Y M+ G+++ N + S+ P K + A
Sbjct: 88 DKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA----- 139
Query: 201 FLHTSDKQ-VIYRDFKASNILL-DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+HT + +++ D K +N L+ DG K+ DFG+A + S V +GT Y
Sbjct: 140 -VHTIHQHGIVHSDLKPANFLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 196
Query: 259 PEYV-----------ATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
PE + + + KSDV+ G +L + G P Q
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG------KTPFQQ--------- 241
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVV 357
+++ K IID + ++P + + CL+ +PK R S+ E++
Sbjct: 242 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 94/219 (42%), Gaps = 39/219 (17%)
Query: 86 LGEGGFGKVF---------------KGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQ 130
L +G F K+ K L++K + I++K +++++
Sbjct: 39 LNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIK-------SKYDDFK 91
Query: 131 SEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSL---ENHLFGRGASVQPLAWNI 187
+E+ + + + + G E+ ++YE+M+ S+ + + F +
Sbjct: 92 NELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151
Query: 188 RLKIAIGAA-RGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHV 246
+K I + +++H ++K + +RD K SNIL+D + K+SDFG S+ V
Sbjct: 152 VIKCIIKSVLNSFSYIH-NEKNICHRDVKPSNILMDKNGRVKLSDFG-------ESEYMV 203
Query: 247 TTRVM---GTYGYAAPEYVATGHLY--VKSDVYGFGVVL 280
++ GTY + PE+ + Y K D++ G+ L
Sbjct: 204 DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
V+G G FG VF+ L E +A+KK+ LQ E+ + + HPN+
Sbjct: 47 VIGNGSFGVVFQAKLVE--------SDEVAIKKV----LQDKRFKNRELQIMRIVKHPNV 94
Query: 145 VRLLGYCWEDKE------LLLVYEFMQKGSLE-NHLFGRGASVQPLAWNIRLKIAIGAAR 197
V L + + + + L LV E++ + + + + P+ I+L + R
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL-IKLYMY-QLLR 152
Query: 198 GLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGY 256
LA++H+ + +RD K N+LLD S K+ DFG AK+ A + +V+ + + Y
Sbjct: 153 SLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL-IAGEPNVSX--ICSRYY 207
Query: 257 AAPEYVATGHLYVKS-DVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIK 306
APE + Y + D++ G V+ E++ G SG LV+ IK
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGE--SGIDQLVEIIK 256
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 109/279 (39%), Gaps = 42/279 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
+G G FG V + D++ S ++AVK + E + E + E+ L HPN+
Sbjct: 27 IGSGNFG-VARLMRDKQ------SNELVAVKYIERGEKID--ENVKREIINHRSLRHPNI 77
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
VR L +V E+ G L + G + A ++ G+++ H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI----SGVSYCHA 133
Query: 205 SDKQVIYRDFKASNILLDGSYTA--KISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
QV +RD K N LLDGS KI FG +K SQ T +GT Y APE +
Sbjct: 134 --MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST---VGTPAYIAPEVL 188
Query: 263 ATGHLYVK-SDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
K +DV+ GV L +L G + E + FR I
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE----------------EPKNFRKTIHR 232
Query: 322 RLQGQYPYKAAYQIA----QLSLKCLEAEPKHRPSMREV 356
L QY I+ L + A+P R S+ E+
Sbjct: 233 ILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I ++ S S +G E+ + EV+ L + HPN
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKS-SRRGVSREDIEREVSILKEIQHPN 75
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A +I G+ +LH
Sbjct: 76 VITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLH 131
Query: 204 TSDKQVIYRDFKASNI-LLDGSY---TAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
+ Q+ + D K NI LLD + KI DFGLA ++ + GT + AP
Sbjct: 132 SL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAP 186
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 18/205 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAP-GKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G F V + K P G+ + +I KKL++ Q E E L HPN+
Sbjct: 12 LGKGAFSVVRRCM---KIPTGQEYAAKIINTKKLSARDHQKLER---EARICRLLKHPNI 65
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
VRL E+ LV++ + G L + R + A + +I H
Sbjct: 66 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN------HC 119
Query: 205 SDKQVIYRDFKASNILLDGS---YTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEY 261
+++RD K N+LL K++DFGLA Q+ GT GY +PE
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEV 177
Query: 262 VATGHLYVKSDVYGFGVVLVEILTG 286
+ D++ GV+L +L G
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 18/205 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAP-GKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
LG+G F V + K P G+ + +I KKL++ Q E E L HPN+
Sbjct: 12 LGKGAFSVVRRCM---KIPTGQEYAAKIINTKKLSARDHQKLER---EARICRLLKHPNI 65
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
VRL E+ LV++ + G L + R + A + +I H
Sbjct: 66 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN------HC 119
Query: 205 SDKQVIYRDFKASNILLDGS---YTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEY 261
+++RD K N+LL K++DFGLA Q+ GT GY +PE
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEV 177
Query: 262 VATGHLYVKSDVYGFGVVLVEILTG 286
+ D++ GV+L +L G
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 52/290 (17%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL--QGFEEWQSEVNFLGRLSH-- 141
+G GG KVF+ L+EK + A+K +N E Q + +++E+ +L +L
Sbjct: 16 IGSGGSSKVFQV-LNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 67
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLE-NHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
++RL Y D+ +Y M+ G+++ N + S+ P K + A
Sbjct: 68 DKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA----- 119
Query: 201 FLHTSDKQ-VIYRDFKASNILL-DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+HT + +++ D K +N L+ DG K+ DFG+A + S V +GT Y
Sbjct: 120 -VHTIHQHGIVHSDLKPANFLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 176
Query: 259 PEYV-----------ATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
PE + + + KSDV+ G +L + G P Q
Sbjct: 177 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG------KTPFQQ--------- 221
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVV 357
+++ K IID + ++P + + CL+ +PK R S+ E++
Sbjct: 222 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 52/290 (17%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL--QGFEEWQSEVNFLGRLSH-- 141
+G GG KVF+ L+EK + A+K +N E Q + +++E+ +L +L
Sbjct: 64 IGSGGSSKVFQ-VLNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLE-NHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
++RL Y D+ +Y M+ G+++ N + S+ P K + A
Sbjct: 116 DKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA----- 167
Query: 201 FLHTSDKQ-VIYRDFKASNILL-DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+HT + +++ D K +N L+ DG K+ DFG+A + S V +GT Y
Sbjct: 168 -VHTIHQHGIVHSDLKPANFLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 224
Query: 259 PEYV-----------ATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
PE + + + KSDV+ G +L + G P Q
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG------KTPFQQ--------- 269
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVV 357
+++ K IID + ++P + + CL+ +PK R S+ E++
Sbjct: 270 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 52/290 (17%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL--QGFEEWQSEVNFLGRLSH-- 141
+G GG KVF+ L+EK + A+K +N E Q + +++E+ +L +L
Sbjct: 17 IGSGGSSKVFQ-VLNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLE-NHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
++RL Y D+ +Y M+ G+++ N + S+ P K + A
Sbjct: 69 DKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA----- 120
Query: 201 FLHTSDKQ-VIYRDFKASNILL-DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+HT + +++ D K +N L+ DG K+ DFG+A + S V +GT Y
Sbjct: 121 -VHTIHQHGIVHSDLKPANFLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 177
Query: 259 PEYV-----------ATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
PE + + + KSDV+ G +L + G P Q
Sbjct: 178 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG------KTPFQQ--------- 222
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVV 357
+++ K IID + ++P + + CL+ +PK R S+ E++
Sbjct: 223 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 126 FEEWQSEVNFLGRLSHPNLVRLLGYCWEDKE--LLLVYEFMQKGSLENHLFGRGASVQPL 183
E+ E+ L +L HPN+V+L+ + E L +V+E + +G + +++PL
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVM-----EVPTLKPL 134
Query: 184 AWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ 243
+ + +G+ +LH +++I+RD K SN+L+ KI+DFG++
Sbjct: 135 SEDQARFYFQDLIKGIEYLHY--QKIIHRDIKPSNLLVGEDGHIKIADFGVS--NEFKGS 190
Query: 244 SHVTTRVMGTYGYAAPEYVATGHLYVKS---DVYGFGVVLVEILTG 286
+ + +GT + APE ++ DV+ GV L + G
Sbjct: 191 DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG 236
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 109/279 (39%), Gaps = 42/279 (15%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLN-SESLQGFEEWQSEVNFLGRLSHPNL 144
+G G FG V + D++ S ++AVK + E + E + E+ L HPN+
Sbjct: 27 IGSGNFG-VARLMRDKQ------SNELVAVKYIERGEKID--ENVKREIINHRSLRHPNI 77
Query: 145 VRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHT 204
VR L +V E+ G L + G + A ++ G+++ H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI----SGVSYCHA 133
Query: 205 SDKQVIYRDFKASNILLDGSYTA--KISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYV 262
QV +RD K N LLDGS KI FG +K SQ T +GT Y APE +
Sbjct: 134 --MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT---VGTPAYIAPEVL 188
Query: 263 ATGHLYVK-SDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDA 321
K +DV+ GV L +L G + E + FR I
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE----------------EPKNFRKTIHR 232
Query: 322 RLQGQYPYKAAYQIA----QLSLKCLEAEPKHRPSMREV 356
L QY I+ L + A+P R S+ E+
Sbjct: 233 ILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 127/319 (39%), Gaps = 58/319 (18%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL--SHPN 143
LGEG FGKV + +D KA G+ +AVK + + + E +SE+ L L + PN
Sbjct: 22 LGEGAFGKVVEC-IDHKAGGRH-----VAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPN 74
Query: 144 ----LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
V++L + + +V+E + L + F + P + K+A + +
Sbjct: 75 STFRCVQMLEWFEHHGHICIVFELL---GLSTYDFIKENGFLPFRLDHIRKMAYQICKSV 131
Query: 200 AFLHTSDKQVIYRDFKASNILLDGS-----YTAKIS---------DFGLAKLGPSASQSH 245
FLH++ ++ + D K NIL S Y KI D + G +
Sbjct: 132 NFLHSN--KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE 189
Query: 246 VTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWI 305
+ ++ Y APE + DV+ G +L+E G T+ +++ I
Sbjct: 190 HHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 306 -----KPYLSEKRKFRHIIDARLQ-------GQYPYKAAYQIAQLSL------------- 340
K + + RK ++ RL G+Y +A + + L
Sbjct: 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLI 309
Query: 341 -KCLEAEPKHRPSMREVVE 358
K LE +P R ++RE ++
Sbjct: 310 QKMLEYDPAKRITLREALK 328
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 54/307 (17%)
Query: 85 VLGEGGFGKVFKG-WLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPN 143
++G+G FG+V+ G W E A +I +++ N + L+ F + EV + H N
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAI------RLIDIERDNEDQLKAF---KREVMAYRQTRHEN 90
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
+V +G C L ++ + +L + + R A + L N +IA +G+ +LH
Sbjct: 91 VVLFMGACMSPPHLAIITSLCKGRTLYSVV--RDAKI-VLDVNKTRQIAQEIVKGMGYLH 147
Query: 204 TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGP--SASQSHVTTRVM-GTYGYAAPE 260
K ++++D K+ N+ D I+DFGL + A + R+ G + APE
Sbjct: 148 A--KGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE 204
Query: 261 YVATGH---------LYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDW-----IK 306
+ SDV+ G + E L A + + + W +K
Sbjct: 205 IIRQLSPDTEEDKLPFSKHSDVFALGTIWYE----LHAREWPFKTQPAEAIIWQMGTGMK 260
Query: 307 PYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVETLERLQAS 366
P LS+ +I+ + L C E + RP+ ++++ LE+L
Sbjct: 261 PNLSQ-----------------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303
Query: 367 DQKPKQP 373
+++ P
Sbjct: 304 NRRLSHP 310
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNL 144
+LGEG +GKV K LD + + + K + G + E+ L RL H N+
Sbjct: 12 LLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPN--GEANVKKEIQLLRRLRHKNV 68
Query: 145 VRLLG--YCWEDKELLLVYEFMQKGS---LENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
++L+ Y E +++ +V E+ G L++ R Q + +L GL
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQL------IDGL 122
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-LGPSASQSHVTTRVMGTYGYAA 258
+LH+ + ++++D K N+LL T KIS G+A+ L P A+ T G+ +
Sbjct: 123 EYLHS--QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-QGSPAFQP 179
Query: 259 PEYVATGHLY--VKSDVYGFGVVLVEILTGL 287
PE + K D++ GV L I TGL
Sbjct: 180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGL 210
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 13/138 (9%)
Query: 157 LLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKA 216
L + + +K +L++ + R S++ + L I I A + FLH+ K +++RD K
Sbjct: 136 LYIQMQLCRKENLKDWM-NRRCSLEDREHGVCLHIFIQIAEAVEFLHS--KGLMHRDLKP 192
Query: 217 SNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYG----------YAAPEYVATGH 266
SNI K+ DFGL + M Y Y +PE + +
Sbjct: 193 SNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNN 252
Query: 267 LYVKSDVYGFGVVLVEIL 284
K D++ G++L E+L
Sbjct: 253 YSHKVDIFSLGLILFELL 270
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 52/290 (17%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL--QGFEEWQSEVNFLGRLSH-- 141
+G GG KVF+ L+EK + A+K +N E Q + +++E+ +L +L
Sbjct: 64 IGSGGSSKVFQ-VLNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLE-NHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
++RL Y D+ +Y M+ G+++ N + S+ P K + A
Sbjct: 116 DKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA----- 167
Query: 201 FLHTSDKQ-VIYRDFKASNILL-DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+HT + +++ D K +N L+ DG K+ DFG+A + S V +G Y
Sbjct: 168 -VHTIHQHGIVHSDLKPANFLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMP 224
Query: 259 PEYV-----------ATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
PE + + + KSDV+ G +L + G P Q
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG------KTPFQQ--------- 269
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVV 357
+++ K IID + ++P + + CL+ +PK R S+ E++
Sbjct: 270 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 94/225 (41%), Gaps = 39/225 (17%)
Query: 82 SDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLS- 140
+ +LGEG + KV + +G AVK + ++ EV L +
Sbjct: 17 TSELLGEGAYAKV-------QGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG 69
Query: 141 HPNLVRLLGYCWEDKELLLVYEFMQKGSL------ENHLFGRGASVQPLAWNIRLKIAIG 194
+ N++ L+ + +D LV+E +Q GS+ + H R AS ++
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS----------RVVRD 119
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYT---AKISDFGLA---KLGPSAS--QSHV 246
A L FLHT K + +RD K NIL + KI DF L KL S + +
Sbjct: 120 VAAALDFLHT--KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPE 177
Query: 247 TTRVMGTYGYAAPEYVAT----GHLYVK-SDVYGFGVVLVEILTG 286
T G+ Y APE V Y K D++ GVVL +L+G
Sbjct: 178 LTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I K+ + S +G EE + EV+ L ++ H N
Sbjct: 20 LGSGQFAIVKK--CREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A + +I G+ +LH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL----DGVNYLH 132
Query: 204 TSDKQVIYRDFKASNI-LLDGSYTA---KISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
T K++ + D K NI LLD + K+ DFGLA + + GT + AP
Sbjct: 133 T--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAP 187
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 122/290 (42%), Gaps = 52/290 (17%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESL--QGFEEWQSEVNFLGRLSH-- 141
+G GG KVF+ L+EK + A+K +N E Q + +++E+ +L +L
Sbjct: 36 IGSGGSSKVFQV-LNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87
Query: 142 PNLVRLLGYCWEDKELLLVYEFMQKGSLE-NHLFGRGASVQPLAWNIRLKIAIGAARGLA 200
++RL Y D+ +Y M+ G+++ N + S+ P K + A
Sbjct: 88 DKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA----- 139
Query: 201 FLHTSDKQ-VIYRDFKASNILL-DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAA 258
+HT + +++ D K +N L+ DG K+ DFG+A V +GT Y
Sbjct: 140 -VHTIHQHGIVHSDLKPANFLIVDG--MLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMP 196
Query: 259 PEYV-----------ATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKP 307
PE + + + KSDV+ G +L + G P Q
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG------KTPFQQ--------- 241
Query: 308 YLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVV 357
+++ K IID + ++P + + CL+ +PK R S+ E++
Sbjct: 242 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I K+ + S +G EE + EV+ L ++ H N
Sbjct: 20 LGSGQFAIVKK--CREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A + +I G+ +LH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL----DGVNYLH 132
Query: 204 TSDKQVIYRDFKASNI-LLDGSYTA---KISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
T K++ + D K NI LLD + K+ DFGLA + + GT + AP
Sbjct: 133 T--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAP 187
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I K+ + S +G EE + EV+ L ++ H N
Sbjct: 20 LGSGQFAIVKK--CREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A + +I G+ +LH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL----DGVNYLH 132
Query: 204 TSDKQVIYRDFKASNI-LLDGSYTA---KISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
T K++ + D K NI LLD + K+ DFGLA + + GT + AP
Sbjct: 133 T--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAP 187
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I K+ + S +G EE + EV+ L ++ H N
Sbjct: 20 LGSGQFAIVKK--CREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A + +I G+ +LH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL----DGVNYLH 132
Query: 204 TSDKQVIYRDFKASNI-LLDGSYTA---KISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
T K++ + D K NI LLD + K+ DFGLA + + GT + AP
Sbjct: 133 T--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAP 187
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 86 LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGF--EEWQSEVNFLGRLSHPN 143
LG G F V K EK+ G + I K+ + S +G EE + EV+ L ++ H N
Sbjct: 20 LGSGQFAIVKK--CREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 144 LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLH 203
++ L +++L+ E + G L + L + + + A + +I G+ +LH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL----DGVNYLH 132
Query: 204 TSDKQVIYRDFKASNI-LLDGSYTA---KISDFGLAKLGPSASQSHVTTRVMGTYGYAAP 259
T K++ + D K NI LLD + K+ DFGLA + + GT + AP
Sbjct: 133 T--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAP 187
Query: 260 EYVATGHLYVKSDVYGFGVVLVEILTG 286
E V L +++D++ GV+ +L+G
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 156/364 (42%), Gaps = 75/364 (20%)
Query: 79 NFKSDTVLGEGGFGK-VFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
+F VLG G G V++G D + +AVK++ E F EV L
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRD---------VAVKRILPEC---FSFADREVQLLR 72
Query: 138 RLS-HPNLVRLLGYCWE-DKELLLVYEFMQKGSLENHLFGRGAS---VQPLAWNIRLKIA 192
HPN++R +C E D++ + + +L+ ++ + + ++P+ +
Sbjct: 73 ESDEHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT------LL 124
Query: 193 IGAARGLAFLHTSDKQVIYRDFKASNILLD-----GSYTAKISDFGLAKLGPSASQSHVT 247
GLA LH+ + +++RD K NIL+ G A ISDFGL K A H
Sbjct: 125 QQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCK--KLAVGRHSF 180
Query: 248 TR---VMGTYGYAAPEYVATG---HLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNL 301
+R V GT G+ APE ++ + D++ G V +++ + + P G+
Sbjct: 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS-----EGSHPFGK--- 232
Query: 302 VDWIKPYLSEKRKFRHIIDA-RLQGQYPYKAAYQIA-QLSLKCLEAEPKHRPSMREVVE- 358
S +R+ ++ A L +P K IA +L K + +P+ RPS + V++
Sbjct: 233 --------SLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284
Query: 359 ----TLER-LQ----ASDQKPKQPRVRPTHSMAHRQGQQPLHH------RSPLHTNLDRN 403
+LE+ LQ SD+ K+ P R G+ + PL T+L +
Sbjct: 285 PFFWSLEKQLQFFQDVSDRIEKESLDGPIVKQLERGGRAVVKMDWRENITVPLQTDLRKF 344
Query: 404 RGYQ 407
R Y+
Sbjct: 345 RTYK 348
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTG 286
APE + D++ GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 132 EVNFLGRLSHPNLVRL--LGYCWEDKELLLVYEFMQKGSLENHLFGRG--ASVQP--LAW 185
E+ L L HPN++ L + D+++ L++++ + F R A+ +P L
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 186 NIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYT----AKISDFGLAKLGPSA 241
+ + G+ +LH + V++RD K +NIL+ G KI+D G A+L S
Sbjct: 128 GMVKSLLYQILDGIHYLHAN--WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 242 SQSHVTTR-VMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
+ V+ T+ Y APE + Y K+ D++ G + E+LT
Sbjct: 186 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTG 286
APE + D++ GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHP 142
+ +G G +G+V K + G+ A KK+ ++ + ++ E+ + L HP
Sbjct: 31 ENTIGRGSWGEV-------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 83
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N++RL ++ ++ LV E G LF R + + +I +A+
Sbjct: 84 NIIRLYETFEDNTDIYLVMELCTGG----ELFERVVHKRVFRESDAARIMKDVLSAVAYC 139
Query: 203 HTSDKQVIYRDFKASNILL---DGSYTAKISDFGL-AKLGPSASQSHVTTRVMGTYGYAA 258
H + V +RD K N L K+ DFGL A+ P + T+V GT Y +
Sbjct: 140 HKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG---KMMRTKV-GTPYYVS 193
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTG 286
P+ V G + D + GV++ +L G
Sbjct: 194 PQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 83 DTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHP 142
+ +G G +G+V K + G+ A KK+ ++ + ++ E+ + L HP
Sbjct: 14 ENTIGRGSWGEV-------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 66
Query: 143 NLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFL 202
N++RL ++ ++ LV E G LF R + + +I +A+
Sbjct: 67 NIIRLYETFEDNTDIYLVMELCTGG----ELFERVVHKRVFRESDAARIMKDVLSAVAYC 122
Query: 203 HTSDKQVIYRDFKASNILL---DGSYTAKISDFGL-AKLGPSASQSHVTTRVMGTYGYAA 258
H + V +RD K N L K+ DFGL A+ P + T+V GT Y +
Sbjct: 123 HKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG---KMMRTKV-GTPYYVS 176
Query: 259 PEYVATGHLYVKSDVYGFGVVLVEILTG 286
P+ V G + D + GV++ +L G
Sbjct: 177 PQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 9 QYQVGPLLGSGGFGSVYSG-------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 61
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E M+ L + + RGA + LA +
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFW 121
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSY-TAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D + K+ DFG L + V T
Sbjct: 122 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 171
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 53/240 (22%)
Query: 85 VLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHP 142
++G G +G V + + V+A+KK+ E L + E+ L RL+H
Sbjct: 60 LIGTGSYGHVCEAY-------DKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 143 NLVRLLGYCWEDK-----ELLLVYEFMQ---KGSLENHLFGRGASVQPLAWNIRLKIAIG 194
++V++L EL +V E K ++ ++ L +N+ +
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLV----- 167
Query: 195 AARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAK-------------LGPSA 241
G+ ++H++ +++RD K +N L++ + K+ DFGLA+ + P
Sbjct: 168 ---GVKYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPRE 222
Query: 242 SQSHVTT---------RVMG---TYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTGLR 288
++ T ++ G T Y APE + Y ++ DV+ G + E+L ++
Sbjct: 223 DDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 78 RNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLG 137
++F+ + LG G +G+VFK E G + AVK+ S+ F + L
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKE-------DGRLYAVKR----SMSPFRGPKDRARKLA 105
Query: 138 RLS-------HPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASV-QPLAWNIRL 189
+ HP VRL WE+ +L + + SL+ H GAS+ + W L
Sbjct: 106 EVGSHEKVGQHPCCVRL-EQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGY-L 163
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTR 249
+ + LA H + +++ D K +NI L K+ DFGL +A V
Sbjct: 164 RDTL-----LALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE- 217
Query: 250 VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGL 287
G Y APE + G +DV+ G+ ++E+ +
Sbjct: 218 --GDPRYMAPELL-QGSYGTAADVFSLGLTILEVACNM 252
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 30/216 (13%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKL----NSESLQGFEEWQSEVNF 135
++ T LGEG +G+V+K + + +A+K++ E + G EV+
Sbjct: 36 YRRITKLGEGTYGEVYKAI-------DTVTNETVAIKRIRLEHEEEGVPGTA--IREVSL 86
Query: 136 LGRLSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGA 195
L L H N++ L + L L++E+ EN L ++ +
Sbjct: 87 LKELQHRNIIELKSVIHHNHRLHLIFEYA-----ENDLKKYMDKNPDVSMRVIKSFLYQL 141
Query: 196 ARGLAFLHTSDKQVIYRDFKASNILL---DGSYTA--KISDFGLAK-LGPSASQSHVTTR 249
G+ F H+ ++ ++RD K N+LL D S T KI DFGLA+ G Q T
Sbjct: 142 INGVNFCHS--RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ---FTH 196
Query: 250 VMGTYGYAAPE-YVATGHLYVKSDVYGFGVVLVEIL 284
+ T Y PE + + H D++ + E+L
Sbjct: 197 EIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTG 286
APE + D++ G ++ E++ G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTG 286
APE + D++ G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTG 286
APE + D++ G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTG 286
APE + D++ G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTG 286
APE + D++ G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A + + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNFMMTPYVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTG 286
APE + D++ G ++ E++ G
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 22/186 (11%)
Query: 110 GTVIAVKKLNS--ESLQGFEEWQSEVNFLGRLSHPNLVRLLGY------CWEDKELLLVY 161
G +AVKKL+ ++ + E+ L ++H N++ LL E +++ LV
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 162 EFMQKGSLEN-HLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNIL 220
E M + H+ + L + + G+ LH++ +I+RD K SNI+
Sbjct: 107 ELMDANLCQVIHMELDHERMSYLLYQMLC--------GIKHLHSAG--IIHRDLKPSNIV 156
Query: 221 LDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVL 280
+ T KI DFGLA+ +AS + + T + T Y APE + D++ G ++
Sbjct: 157 VKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 213
Query: 281 VEILTG 286
E++ G
Sbjct: 214 GELVKG 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTG 286
APE + D++ G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTG 286
APE + D++ G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTG 286
APE + D++ G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + + T Y
Sbjct: 140 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPFVVTRYYR 194
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEILTG 286
APE + D++ G ++ E++ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 39/257 (15%)
Query: 116 KKLNSESLQGFEEWQSEVNFLGRLSH-PNLVRLLGYCWED-----KELLLVYEFMQKGSL 169
+K + LQ + + EV R S P++VR++ +E+ K LL+V E + G L
Sbjct: 58 EKFALKMLQDCPKARREVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGEL 116
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG---SYT 226
+ + RG + +IG A + +LH+ + + +RD K N+L +
Sbjct: 117 FSRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAHRDVKPENLLYTSKRPNAI 172
Query: 227 AKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
K++DFG AK + S + +TT Y Y APE + D++ GV++ +L G
Sbjct: 173 LKLTDFGFAK--ETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
Query: 287 LRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPY------KAAYQIAQLSL 340
+N H L I P + + + GQY + + + ++ L
Sbjct: 230 YPPFYSN-----HGLA--ISPGMKTRIRM---------GQYEFPNPEWSEVSEEVKMLIR 273
Query: 341 KCLEAEPKHRPSMREVV 357
L+ EP R ++ E +
Sbjct: 274 NLLKTEPTQRMTITEFM 290
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 123/300 (41%), Gaps = 42/300 (14%)
Query: 73 LRAATRNF--KSDTV-----LGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSE-SLQ 124
+ A NF K+D + LG G +G V K P SG + AVK++ + + Q
Sbjct: 22 FQGAXENFEVKADDLEPIXELGRGAYGVVEKX---RHVP----SGQIXAVKRIRATVNSQ 74
Query: 125 GFEEWQSEVNFLGR-LSHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPL 183
+ +++ R + P V G + + ++ + E + SL+ Q +
Sbjct: 75 EQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTI 133
Query: 184 AWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ 243
+I KIA+ + L LH S VI+RD K SN+L++ K DFG++
Sbjct: 134 PEDILGKIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVA 192
Query: 244 SHVTTRVMGTYGYAAPEYV-----ATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQ 298
+ G Y APE + G+ VKSD++ G+ +E+ D+
Sbjct: 193 KDIDA---GCKPYXAPERINPELNQKGY-SVKSDIWSLGITXIELAILRFPYDS------ 242
Query: 299 HNLVDWIKPYLSEKRKFRHIIDARLQGQYPYKAAYQIAQLSLKCLEAEPKHRPSMREVVE 358
W P+ ++ + +++ K + + + +CL+ K RP+ E+ +
Sbjct: 243 -----WGTPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 39/257 (15%)
Query: 116 KKLNSESLQGFEEWQSEVNFLGRLSH-PNLVRLLGYCWED-----KELLLVYEFMQKGSL 169
+K + LQ + + EV R S P++VR++ +E+ K LL+V E + G L
Sbjct: 49 EKFALKMLQDCPKARREVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGEL 107
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG---SYT 226
+ + RG A+ R I + G A + + +RD K N+L +
Sbjct: 108 FSRIQDRGDQ----AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 163
Query: 227 AKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
K++DFG AK + S + +TT Y Y APE + D++ GV++ +L G
Sbjct: 164 LKLTDFGFAK--ETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
Query: 287 LRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPY------KAAYQIAQLSL 340
+N H L I P + + + GQY + + + ++ L
Sbjct: 221 YPPFYSN-----HGLA--ISPGMKTRIRM---------GQYEFPNPEWSEVSEEVKMLIR 264
Query: 341 KCLEAEPKHRPSMREVV 357
L+ EP R ++ E +
Sbjct: 265 NLLKTEPTQRMTITEFM 281
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 39/257 (15%)
Query: 116 KKLNSESLQGFEEWQSEVNFLGRLSH-PNLVRLLGYCWED-----KELLLVYEFMQKGSL 169
+K + LQ + + EV R S P++VR++ +E+ K LL+V E + G L
Sbjct: 50 EKFALKMLQDCPKARREVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGEL 108
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG---SYT 226
+ + RG A+ R I + G A + + +RD K N+L +
Sbjct: 109 FSRIQDRGDQ----AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 164
Query: 227 AKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
K++DFG AK + S + +TT Y Y APE + D++ GV++ +L G
Sbjct: 165 LKLTDFGFAK--ETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
Query: 287 LRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPY------KAAYQIAQLSL 340
+N H L I P + + + GQY + + + ++ L
Sbjct: 222 YPPFYSN-----HGLA--ISPGMKTRIRM---------GQYEFPNPEWSEVSEEVKMLIR 265
Query: 341 KCLEAEPKHRPSMREVV 357
L+ EP R ++ E +
Sbjct: 266 NLLKTEPTQRMTITEFM 282
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 39/257 (15%)
Query: 116 KKLNSESLQGFEEWQSEVNFLGRLSH-PNLVRLLGYCWED-----KELLLVYEFMQKGSL 169
+K + LQ + + EV R S P++VR++ +E+ K LL+V E + G L
Sbjct: 48 EKFALKMLQDCPKARREVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGEL 106
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG---SYT 226
+ + RG A+ R I + G A + + +RD K N+L +
Sbjct: 107 FSRIQDRGDQ----AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 162
Query: 227 AKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
K++DFG AK + S + +TT Y Y APE + D++ GV++ +L G
Sbjct: 163 LKLTDFGFAK--ETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
Query: 287 LRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPY------KAAYQIAQLSL 340
+N H L I P + + + GQY + + + ++ L
Sbjct: 220 YPPFYSN-----HGLA--ISPGMKTRIRM---------GQYEFPNPEWSEVSEEVKMLIR 263
Query: 341 KCLEAEPKHRPSMREVV 357
L+ EP R ++ E +
Sbjct: 264 NLLKTEPTQRMTITEFM 280
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 20/213 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
++ D+++G+G FG+V K + ++ + + +I KK + Q EV L +
Sbjct: 56 YEIDSLIGKGSFGQVVKAY--DRVEQEWVAIKIIKNKK------AFLNQAQIEVRLLELM 107
Query: 140 SHPN------LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ + +V L + L LV+E + S + R + + ++ N+ K A
Sbjct: 108 NKHDTEMKYYIVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
L FL T + +I+ D K NILL K S + G S + + +
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQS 221
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
Y +PE + + D++ G +LVE+ TG
Sbjct: 222 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 39/257 (15%)
Query: 116 KKLNSESLQGFEEWQSEVNFLGRLSH-PNLVRLLGYCWED-----KELLLVYEFMQKGSL 169
+K + LQ + + EV R S P++VR++ +E+ K LL+V E + G L
Sbjct: 42 EKFALKMLQDCPKARREVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGEL 100
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG---SYT 226
+ + RG A+ R I + G A + + +RD K N+L +
Sbjct: 101 FSRIQDRGDQ----AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 156
Query: 227 AKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
K++DFG AK + S + +TT Y Y APE + D++ GV++ +L G
Sbjct: 157 LKLTDFGFAK--ETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
Query: 287 LRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPY------KAAYQIAQLSL 340
+N H L I P + + + GQY + + + ++ L
Sbjct: 214 YPPFYSN-----HGLA--ISPGMKTRIRM---------GQYEFPNPEWSEVSEEVKMLIR 257
Query: 341 KCLEAEPKHRPSMREVV 357
L+ EP R ++ E +
Sbjct: 258 NLLKTEPTQRMTITEFM 274
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
++ D+++G+G FG+V K + ++ + + +I KK + Q EV L +
Sbjct: 56 YEIDSLIGKGSFGQVVKAY--DRVEQEWVAIKIIKNKK------AFLNQAQIEVRLLELM 107
Query: 140 SHPN------LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ + +V L + L LV+E + S + R + + ++ N+ K A
Sbjct: 108 NKHDTEMKYYIVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDG--SYTAKISDFGLA-KLGPSASQSHVTTRV 250
L FL T + +I+ D K NILL KI DFG + +LG Q + +R
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQX-IQSRF 223
Query: 251 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
Y +PE + + D++ G +LVE+ TG
Sbjct: 224 -----YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 20/213 (9%)
Query: 80 FKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRL 139
++ D+++G+G FG+V K + ++ + + +I KK + Q EV L +
Sbjct: 37 YEIDSLIGKGSFGQVVKAY--DRVEQEWVAIKIIKNKK------AFLNQAQIEVRLLELM 88
Query: 140 SHPN------LVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAI 193
+ + +V L + L LV+E + S + R + + ++ N+ K A
Sbjct: 89 NKHDTEMKYYIVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLTRKFAQ 145
Query: 194 GAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGT 253
L FL T + +I+ D K NILL K S + G S + + +
Sbjct: 146 QMCTALLFLATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQS 202
Query: 254 YGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
Y +PE + + D++ G +LVE+ TG
Sbjct: 203 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 39/257 (15%)
Query: 116 KKLNSESLQGFEEWQSEVNFLGRLSH-PNLVRLLGYCWED-----KELLLVYEFMQKGSL 169
+K + LQ + + EV R S P++VR++ +E+ K LL+V E + G L
Sbjct: 44 EKFALKMLQDCPKARREVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGEL 102
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG---SYT 226
+ + RG + +IG A + +LH+ + + +RD K N+L +
Sbjct: 103 FSRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAHRDVKPENLLYTSKRPNAI 158
Query: 227 AKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
K++DFG AK + S + +TT Y Y APE + D++ GV++ +L G
Sbjct: 159 LKLTDFGFAK--ETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
Query: 287 LRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPY------KAAYQIAQLSL 340
+N H L I P + + + GQY + + + ++ L
Sbjct: 216 YPPFYSN-----HGLA--ISPGMKTRIRM---------GQYEFPNPEWSEVSEEVKMLIR 259
Query: 341 KCLEAEPKHRPSMREVV 357
L+ EP R ++ E +
Sbjct: 260 NLLKTEPTQRMTITEFM 276
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 39/257 (15%)
Query: 116 KKLNSESLQGFEEWQSEVNFLGRLSH-PNLVRLLGYCWED-----KELLLVYEFMQKGSL 169
+K + LQ + + EV R S P++VR++ +E+ K LL+V E + G L
Sbjct: 94 EKFALKMLQDCPKARREVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGEL 152
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG---SYT 226
+ + RG + +IG A + +LH+ + + +RD K N+L +
Sbjct: 153 FSRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAHRDVKPENLLYTSKRPNAI 208
Query: 227 AKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
K++DFG AK + S + +TT Y Y APE + D++ GV++ +L G
Sbjct: 209 LKLTDFGFAK--ETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
Query: 287 LRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPY------KAAYQIAQLSL 340
+N H L I P + + + GQY + + + ++ L
Sbjct: 266 YPPFYSN-----HGLA--ISPGMKTRIRM---------GQYEFPNPEWSEVSEEVKMLIR 309
Query: 341 KCLEAEPKHRPSMREVV 357
L+ EP R ++ E +
Sbjct: 310 NLLKTEPTQRMTITEFM 326
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 39/257 (15%)
Query: 116 KKLNSESLQGFEEWQSEVNFLGRLSH-PNLVRLLGYCWED-----KELLLVYEFMQKGSL 169
+K + LQ + + EV R S P++VR++ +E+ K LL+V E + G L
Sbjct: 43 EKFALKMLQDCPKARREVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGEL 101
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG---SYT 226
+ + RG A+ R I + G A + + +RD K N+L +
Sbjct: 102 FSRIQDRGDQ----AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 157
Query: 227 AKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
K++DFG AK + S + +TT Y Y APE + D++ GV++ +L G
Sbjct: 158 LKLTDFGFAK--ETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
Query: 287 LRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPY------KAAYQIAQLSL 340
+N H L I P + + + GQY + + + ++ L
Sbjct: 215 YPPFYSN-----HGLA--ISPGMKTRIRM---------GQYEFPNPEWSEVSEEVKMLIR 258
Query: 341 KCLEAEPKHRPSMREVV 357
L+ EP R ++ E +
Sbjct: 259 NLLKTEPTQRMTITEFM 275
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 39/257 (15%)
Query: 116 KKLNSESLQGFEEWQSEVNFLGRLSH-PNLVRLLGYCWED-----KELLLVYEFMQKGSL 169
+K + LQ + + EV R S P++VR++ +E+ K LL+V E + G L
Sbjct: 88 EKFALKMLQDCPKARREVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGEL 146
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG---SYT 226
+ + RG + +IG A + +LH+ + + +RD K N+L +
Sbjct: 147 FSRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAHRDVKPENLLYTSKRPNAI 202
Query: 227 AKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
K++DFG AK + S + +TT Y Y APE + D++ GV++ +L G
Sbjct: 203 LKLTDFGFAK--ETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
Query: 287 LRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPY------KAAYQIAQLSL 340
+N H L I P + + + GQY + + + ++ L
Sbjct: 260 YPPFYSN-----HGLA--ISPGMKTRIRM---------GQYEFPNPEWSEVSEEVKMLIR 303
Query: 341 KCLEAEPKHRPSMREVV 357
L+ EP R ++ E +
Sbjct: 304 NLLKTEPTQRMTITEFM 320
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 39/257 (15%)
Query: 116 KKLNSESLQGFEEWQSEVNFLGRLSH-PNLVRLLGYCWED-----KELLLVYEFMQKGSL 169
+K + LQ + + EV R S P++VR++ +E+ K LL+V E + G L
Sbjct: 44 EKFALKMLQDCPKARREVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGEL 102
Query: 170 ENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDG---SYT 226
+ + RG A+ R I + G A + + +RD K N+L +
Sbjct: 103 FSRIQDRGDQ----AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 158
Query: 227 AKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
K++DFG AK + S + +TT Y Y APE + D++ GV++ +L G
Sbjct: 159 LKLTDFGFAK--ETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
Query: 287 LRALDTNRPSGQHNLVDWIKPYLSEKRKFRHIIDARLQGQYPY------KAAYQIAQLSL 340
+N H L I P + + + GQY + + + ++ L
Sbjct: 216 YPPFYSN-----HGLA--ISPGMKTRIRM---------GQYEFPNPEWSEVSEEVKMLIR 259
Query: 341 KCLEAEPKHRPSMREVV 357
L+ EP R ++ E +
Sbjct: 260 NLLKTEPTQRMTITEFM 276
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 24 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 76
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 77 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 136
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D K+ DFG L + V T
Sbjct: 137 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 186
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 24 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 76
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 77 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 136
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D K+ DFG L + V T
Sbjct: 137 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 186
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 37 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSY-TAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D + K+ DFG L + V T
Sbjct: 150 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 199
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 132 EVNFLGRL-SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLK 190
E+ L R HPN++ L + K + +V E M+ G L + + + + A +
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFT 124
Query: 191 IAIGAARGLAFLHTSDKQVIYRDFKASNIL-LDGS---YTAKISDFGLAKLGPSASQSHV 246
I + + +LH + V++RD K SNIL +D S + +I DFG AK +++ +
Sbjct: 125 IT----KTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGL 176
Query: 247 TTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTG 286
T + APE + D++ GV+L +LTG
Sbjct: 177 LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 44 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 96
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 97 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 156
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D K+ DFG L + V T
Sbjct: 157 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 206
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 37 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSY-TAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D + K+ DFG L + V T
Sbjct: 150 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 199
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 38 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSY-TAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D + K+ DFG L + V T
Sbjct: 151 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 200
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 37 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSY-TAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D + K+ DFG L + V T
Sbjct: 150 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 199
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 140 SHPNLVRLLGYCWEDKELLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGL 199
S P ++ L E++L+ E+ G + + A + ++ N +++ G+
Sbjct: 87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEM--VSENDVIRLIKQILEGV 144
Query: 200 AFLHTSDKQVIYRDFKASNILLDGSY---TAKISDFGLA-KLGPSASQSHVTTRVMGTYG 255
+LH ++ +++ D K NILL Y KI DFG++ K+G + +MGT
Sbjct: 145 YYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE----LREIMGTPE 198
Query: 256 YAAPEYVATGHLYVKSDVYGFGVVLVEILT 285
Y APE + + +D++ G++ +LT
Sbjct: 199 YLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 52 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 104
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 105 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 164
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSY-TAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D + K+ DFG L + V T
Sbjct: 165 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 214
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 38 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSY-TAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D + K+ DFG L + V T
Sbjct: 151 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 200
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 25 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D K+ DFG L + V T
Sbjct: 138 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 187
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 37 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D K+ DFG L + V T
Sbjct: 150 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 199
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 25 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D K+ DFG L + V T
Sbjct: 138 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 187
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 38 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D K+ DFG L + V T
Sbjct: 151 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 200
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 25 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D K+ DFG L + V T
Sbjct: 138 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 187
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 57 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 109
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 110 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 169
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D K+ DFG L + V T
Sbjct: 170 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 219
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 220 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 38 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D K+ DFG L + V T
Sbjct: 151 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 200
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEIL 284
APE + D++ G ++ E++
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 5 QYQVGPLLGSGGFGSVYSG-------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 57
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 58 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSY-TAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D + K+ DFG L + V T
Sbjct: 118 QV-LEAVR-----HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 167
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEIL 284
APE + D++ G ++ E++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEIL 284
APE + D++ G ++ E++
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEIL 284
APE + D++ G ++ E++
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEIL 284
APE + D++ G ++ E++
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 131 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 185
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEIL 284
APE + D++ G ++ E++
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 131 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 185
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEIL 284
APE + D++ G ++ E++
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEIL 284
APE + D++ G ++ E++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 9 QYQVGPLLGSGGFGSVYSG-------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 61
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 121
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSY-TAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D + K+ DFG L + V T
Sbjct: 122 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 171
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 137 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 191
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEIL 284
APE + D++ G ++ E++
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEIL 284
APE + D++ G ++ E++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 10 QYQVGPLLGSGGFGSVYSG-------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSY-TAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D + K+ DFG L + V T
Sbjct: 123 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 172
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEIL 284
APE + D++ G ++ E++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 10 QYQVGPLLGSGGFGSVYSG-------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D K+ DFG L + V T
Sbjct: 123 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 172
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 10 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D K+ DFG L + V T
Sbjct: 123 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 172
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 52 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 104
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 105 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 164
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D K+ DFG L + V T
Sbjct: 165 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 214
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEIL 284
APE + D++ G ++ E++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 11/140 (7%)
Query: 157 LLLVYEFMQKGSLENHLFGRGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKA 216
LL++ E M+ G L + + RG + IG A + FLH+ + + +RD K
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA--IQFLHSHN--IAHRDVKP 137
Query: 217 SNILL---DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDV 273
N+L + K++DFG AK +Q+ + T Y Y APE + D+
Sbjct: 138 ENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPY-YVAPEVLGPEKYDKSCDM 193
Query: 274 YGFGVVLVEILTGLRALDTN 293
+ GV++ +L G +N
Sbjct: 194 WSLGVIMYILLCGFPPFYSN 213
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 79 NFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEWQS------E 132
++ +LG GGFG V+ G + +A+K + + + + E + E
Sbjct: 32 QYQVGPLLGSGGFGSVYSGI-------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 84
Query: 133 VNFLGRLS--HPNLVRLLGYCWEDKELLLVYEFMQK-GSLENHLFGRGASVQPLAWNIRL 189
V L ++S ++RLL + +L+ E + L + + RGA + LA +
Sbjct: 85 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 144
Query: 190 KIAIGAARGLAFLHTSDKQVIYRDFKASNILLD-GSYTAKISDFGLAKLGPSASQSHVTT 248
++ + A R H + V++RD K NIL+D K+ DFG L + V T
Sbjct: 145 QV-LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 194
Query: 249 RVMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLVEILTG 286
GT Y+ PE++ + +S V+ G++L +++ G
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEIL 284
APE + D++ G ++ E++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 198 GLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYA 257
G+ LH++ +I+RD K SNI++ T KI DFGLA+ +A S + T + T Y
Sbjct: 176 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 230
Query: 258 APEYVATGHLYVKSDVYGFGVVLVEIL 284
APE + D++ G ++ E++
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMV 257
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,174,076
Number of Sequences: 62578
Number of extensions: 496147
Number of successful extensions: 3782
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 206
Number of HSP's that attempted gapping in prelim test: 1158
Number of HSP's gapped (non-prelim): 1093
length of query: 413
length of database: 14,973,337
effective HSP length: 101
effective length of query: 312
effective length of database: 8,652,959
effective search space: 2699723208
effective search space used: 2699723208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)