Query 015099
Match_columns 413
No_of_seqs 181 out of 428
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 06:40:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015099.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015099hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bij_A Uncharacterized protein 99.3 3.4E-12 1.1E-16 124.5 10.9 169 20-235 30-262 (285)
2 4af8_A Metacaspase MCA2; hydro 99.0 1.9E-09 6.4E-14 108.8 13.7 181 20-221 113-332 (367)
3 4f6o_A Metacaspase-1; rossmann 99.0 1.7E-09 5.7E-14 108.6 10.3 170 21-221 75-327 (350)
4 3uoa_B Mucosa-associated lymph 98.6 3.3E-07 1.1E-11 93.1 13.8 157 21-221 27-200 (390)
5 1m72_A Caspase-1; caspase, cys 94.7 0.056 1.9E-06 52.0 7.1 162 21-222 56-234 (272)
6 2j32_A Caspase-3; Pro-caspase3 94.3 0.049 1.7E-06 51.7 5.7 161 22-222 42-217 (250)
7 1f1j_A Caspase-7 protease; cas 94.3 0.058 2E-06 52.9 6.2 162 21-222 94-273 (305)
8 3h11_B Caspase-8; cell death, 94.2 0.09 3.1E-06 50.6 7.2 163 21-222 49-236 (271)
9 3sir_A Caspase; hydrolase; 2.6 93.9 0.18 6.2E-06 48.1 8.6 159 21-222 44-224 (259)
10 4ehd_A Caspase-3; caspase, apo 93.3 0.17 5.9E-06 48.8 7.5 177 6-222 48-245 (277)
11 2nn3_C Caspase-1; cysteine pro 93.2 0.11 3.8E-06 51.0 6.0 162 21-222 84-262 (310)
12 3od5_A Caspase-6; caspase doma 93.0 0.18 6.2E-06 48.6 7.2 162 21-222 46-235 (278)
13 1nw9_B Caspase 9, apoptosis-re 92.3 0.31 1.1E-05 46.7 7.8 98 22-143 47-152 (277)
14 2fp3_A Caspase NC; apoptosis, 91.6 0.28 9.5E-06 48.2 6.7 99 21-142 84-187 (316)
15 3e4c_A Caspase-1; zymogen, inf 90.8 0.8 2.7E-05 44.6 8.9 164 21-222 82-277 (302)
16 2h54_A Caspase-1; allosteric s 90.3 0.23 7.9E-06 44.9 4.3 100 21-143 65-170 (178)
17 3h11_A CAsp8 and FADD-like apo 78.8 2.7 9.2E-05 40.3 5.8 98 21-141 54-154 (272)
18 1qtn_A Caspase-8; apoptosis, d 76.8 1.2 4.2E-05 39.5 2.6 100 21-144 55-155 (164)
19 1pyo_A Caspase-2; apoptosis, c 76.1 1.4 4.7E-05 39.4 2.7 100 22-144 59-159 (167)
20 3p45_A Caspase-6; protease, hu 65.4 3 0.0001 37.7 2.5 98 22-144 70-168 (179)
21 2dko_A Caspase-3; low barrier 64.8 2.1 7.3E-05 37.2 1.3 102 17-143 35-139 (146)
22 2ql9_A Caspase-7; cysteine pro 52.1 6 0.00021 35.5 2.0 98 21-143 69-167 (173)
23 4b3f_X DNA-binding protein smu 28.6 59 0.002 34.1 5.4 46 3-48 484-541 (646)
24 3uem_A Protein disulfide-isome 26.1 3.7E+02 0.013 25.1 10.2 99 28-140 73-176 (361)
25 4gdk_A Ubiquitin-like protein 24.1 48 0.0016 26.4 2.8 36 55-101 27-62 (91)
26 3m7v_A Phosphopentomutase; str 21.5 32 0.0011 32.5 1.5 22 79-100 324-345 (413)
No 1
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=99.34 E-value=3.4e-12 Score=124.45 Aligned_cols=169 Identities=13% Similarity=0.123 Sum_probs=122.8
Q ss_pred hhhhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCC
Q 015099 20 YCIKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGG 99 (413)
Q Consensus 20 ~~n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~ 99 (413)
..++-.+.++|+++|++ |++++- .+.|.+|+++.|..-. -+..|+|.+||||+|||.
T Consensus 30 ~nDa~~~~~~L~~~Gf~---v~~l~~----------~~~t~~~i~~al~~l~----------~~~~~~D~~~~yfSGHG~ 86 (285)
T 3bij_A 30 EADAEDMAAIAAERGFA---VTTLMT----------KAATRAKVIDAIGKAA----------KALGKGDIFMLSYSGHGG 86 (285)
T ss_dssp HHHHHHHHHHHHHTTCE---EEEEEG----------GGCCHHHHHHHHHHHH----------HHCCTTCEEEEEEESCEE
T ss_pred HHHHHHHHHHHHHcCCc---eEEecC----------CccCHHHHHHHHHHHH----------HhCCCCCEEEEEEcCCcc
Confidence 35788899999999997 555542 2589999999987321 124688999999999996
Q ss_pred C-------------CCcCCCCCCCCCHHHHHHHHHHHHHcCCCceEEEeeecccccccccc-------------------
Q 015099 100 P-------------GVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEG------------------- 147 (413)
Q Consensus 100 ~-------------g~l~fp~~~~l~a~dL~~~l~~m~~~~~y~~~v~~iEaC~SgSm~~~------------------- 147 (413)
. ++|...|+ .|..++|.+.|+.|. .-+++++++|+|+||++.++
T Consensus 87 ~~~~~~g~e~dg~~~~l~p~D~-~i~~~~l~~~l~~l~---~~~~~~vilD~C~SG~~~~~~p~~~~~~~~~~~~~~g~~ 162 (285)
T 3bij_A 87 QVPDTSNDEPDGVDETWCLFDG-ELIDDELYALLGKFA---AGVRVLVFSDSCHSGTVVKMAYYNGTTAARSAGPDEGEI 162 (285)
T ss_dssp EEECTTSCCTTCEEEEEECSSS-EEEHHHHHHHHTTSC---SSCEEEEEEECCCCCCHHHHHHTTC-------------C
T ss_pred cccCCCCCccCCCcceEEecCC-CccHHHHHHHHHhcc---CCCeEEEEEecCCCCcccccccccccccccccccccccc
Confidence 2 35555555 477889999887663 35789999999999998762
Q ss_pred ---cCC-----------------------------CCCcEEEEeccCCCCccccccCCCCCCCCCCCcccchhhhhhhhh
Q 015099 148 ---LLP-----------------------------EGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAW 195 (413)
Q Consensus 148 ---~l~-----------------------------~~~nv~~~tAs~~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~w 195 (413)
.+| ...++++++|+.++|.||-.- .- -.||.++
T Consensus 163 ~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~lsa~~~~q~A~e~~----------~~-----G~FT~aL 227 (285)
T 3bij_A 163 RYRAMPQSVAMRTYRANREFYDTIQQKTKKVDLADVKASILLISGCQDNQLSQDGA----------FN-----GAFTGQL 227 (285)
T ss_dssp EESBCCHHHHHHHHHHTHHHHHHHHHHCCCCCTTTCSSEEEEEESSCTTSCCEECS----------SS-----CHHHHHH
T ss_pred ceeecCchhhhhhhhcchhHHHHHhhhcccccccCCCCCEEEEEeCCCCccccccc----------cC-----CHHHHHH
Confidence 011 123689999999999998631 11 2688888
Q ss_pred ccccccccCccccHHHHHHHHHhhhcccCCCCCCceeecC
Q 015099 196 MEDSDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGD 235 (413)
Q Consensus 196 me~~~~~~~~~~Tl~~~f~~v~~~t~~~~t~~Shv~~yGd 235 (413)
++-..... ...|+.++++.|++++.. ..+|+.||.
T Consensus 228 l~~L~~~~-~~~s~~~l~~~v~~~~~~----~Q~P~~~~~ 262 (285)
T 3bij_A 228 LRVWKNGL-YKGSYRSFHKAIVRRMPP----DQTPNFFTA 262 (285)
T ss_dssp HHHHGGGT-CCSCHHHHHHHHHHHSCT----TCCCEEEEE
T ss_pred HHHHhhCC-CCcCHHHHHHHHHHhcCC----CCCcceeCC
Confidence 76443222 346999999999987754 488888874
No 2
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=99.03 E-value=1.9e-09 Score=108.84 Aligned_cols=181 Identities=14% Similarity=0.051 Sum_probs=119.6
Q ss_pred hhhhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCC
Q 015099 20 YCIKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGG 99 (413)
Q Consensus 20 ~~n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~ 99 (413)
..++-.|...|++.|++.++|.++.-..+.+ -.....|.+|+++.|.-- +-...|+|.+|+||+|||.
T Consensus 113 vnDA~~m~~~L~~~GF~~~~i~~L~D~~~~p--~~~~~pTr~nI~~aL~~L----------~~~a~pgD~l~fyFSGHG~ 180 (367)
T 4af8_A 113 CNDVKQMLATLQKRGLPINEAVILVDEDNFP--GRTDQPTRDNIVRYMAWL----------VKDAKPGDVLFFHYSGHGT 180 (367)
T ss_dssp HHHHHHHHHHHHHTTCCCSEEEEEECCTTCT--TCCBCCCHHHHHHHHHHH----------HHTCCTTCEEEEEEESCEE
T ss_pred HHHHHHHHHHHHHcCCCchheEEeccccccc--ccccCCCHHHHHHHHHHH----------HHhCCCCCEEEEEEcCCcC
Confidence 3467789999999999999988775433322 124589999999988721 1134789999999999998
Q ss_pred C---------CC---cCCCCC---CCCCHHHHHHHH-HHHHHcCCCceEEEeeecccccccccccC--------------
Q 015099 100 P---------GV---LGMPTS---RYIYADELIDVL-KKKHASGNYKSLVFYLEACESGSIFEGLL-------------- 149 (413)
Q Consensus 100 ~---------g~---l~fp~~---~~l~a~dL~~~l-~~m~~~~~y~~~v~~iEaC~SgSm~~~~l-------------- 149 (413)
. |+ |.-.|. ..|..+||.+.| +.+ ..=.++++++|+|+||++.+--.
T Consensus 181 q~~d~~de~dg~De~LvP~D~~~~g~I~ddeL~~lLv~~l---~~g~~v~vIlD~ChSGt~~dlp~~~~~r~~~~~~~~~ 257 (367)
T 4af8_A 181 QCKSRGDSDEKYDQCIAPVDFQKSGCIVDDDIHKLLFSRL---PEKVRLTAVFDCGHSGSIMDLPFTYVCSGGEQASGTP 257 (367)
T ss_dssp EECCC-----CCEEEECCTTHHHHCCEEHHHHHHHHTTTC---CTTCEEEEEEECTTCCCCTTCSEEEECCTTCCTTSCC
T ss_pred ccCCCCCCCCCcceEEEeecCCcCCCccHHHHHHHHHHhc---cCCCEEEEEEeCCCCCcccccccccccccccccccch
Confidence 3 21 333341 247777888874 333 22368999999999999977210
Q ss_pred ---------CCCCcEEEEeccCCCCccccccCCCCCCCCCCCcccchhhhhhhhhccccccccCccccHHHHHHHHHhhh
Q 015099 150 ---------PEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRT 220 (413)
Q Consensus 150 ---------~~~~nv~~~tAs~~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~~~~~~~~~~Tl~~~f~~v~~~t 220 (413)
+..-+|+.++|+..+|.|.-..-.... .. -+.--.-+||+++++-... .+..|..+++..++...
T Consensus 258 ~~~~~~~~~~~~~~vi~~Sac~d~QtSad~~~~~~f--~~--g~~~~~GafTyali~~L~~--~~~~Ty~~Ll~~vr~~l 331 (367)
T 4af8_A 258 HMKRIREGNDVLGDVMMISGCADEQTSADVKNTATF--GT--GSTGAGGAATQCITCMLMN--NQSLSYGKLLIETRDML 331 (367)
T ss_dssp CCEECSSCCCCCSEEEEEEEECCCSCCCCCC-----------CCCBCBSHHHHHHHHHHHC--CSCCBHHHHHHHHHHHH
T ss_pred hhhhhccCCCCCCCEEEEEecCCCCchhhhhccccc--cc--cccCcccHHHHHHHHHHHh--CCCCCHHHHHHHHHHHH
Confidence 011268999999999999875210000 00 0001124799988876543 35578899999888766
Q ss_pred c
Q 015099 221 A 221 (413)
Q Consensus 221 ~ 221 (413)
.
T Consensus 332 ~ 332 (367)
T 4af8_A 332 K 332 (367)
T ss_dssp H
T ss_pred H
Confidence 5
No 3
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=98.96 E-value=1.7e-09 Score=108.64 Aligned_cols=170 Identities=19% Similarity=0.268 Sum_probs=107.5
Q ss_pred hhhhhhhHHHHh-cCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCC
Q 015099 21 CIKDQPSEYVIK-FFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGG 99 (413)
Q Consensus 21 ~n~~~~y~~l~~-~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~ 99 (413)
.++..|..+|++ +|++.++|.++.-.... .....|.+|+++.|.-- +-...|+|.+||||+|||.
T Consensus 75 nDA~~m~~~L~~~~Gf~~~~I~lLtd~~~~----~~~~pTr~nI~~aL~~L----------~~~a~pgD~llfYFSGHG~ 140 (350)
T 4f6o_A 75 NDAHNIFNFLTNGYGYSSDDIVILTDDQND----LVRVPTRANMIRAMQWL----------VKDAQPNDSLFLHYSGHGG 140 (350)
T ss_dssp HHHHHHHHHHHHHSCCCGGGEEEEETTSSC----GGGSCCHHHHHHHHHHH----------HTTCCTTCEEEEEEESCEE
T ss_pred HHHHHHHHHHHHhcCCCccceeeecccccc----cccCCCHHHHHHHHHHH----------HHhCCCCCEEEEEEcCCce
Confidence 467789999987 59999998776432211 12358999999999621 1124789999999999997
Q ss_pred C----------C---CcCCCCC---CCCCHHHHHHHHHHHHHcCCCceEEEeeecccccccccccCCC------------
Q 015099 100 P----------G---VLGMPTS---RYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPE------------ 151 (413)
Q Consensus 100 ~----------g---~l~fp~~---~~l~a~dL~~~l~~m~~~~~y~~~v~~iEaC~SgSm~~~~l~~------------ 151 (413)
. | .|.-.|. ..|..+||.+.|.+.. .+=.++++++|+|+||++.+ ||-
T Consensus 141 q~~d~~gdE~dG~De~lvP~D~~~~g~I~ddeL~~~L~~~l--~~g~~vt~IlD~ChSGt~ld--lp~~~~~~g~~~e~~ 216 (350)
T 4f6o_A 141 QTEDLDGDEEDGMDDVIYPVDFETQGPIIDDEMHDIMVKPL--QQGVRLTALFDSCHSGTVLD--LPYTYSTKGIIKEPN 216 (350)
T ss_dssp EC-----------CEEECCTTHHHHCCEEHHHHHHHHTTTC--CTTCEEEEEECSSSCTTTTC--CSEEEETTEEEECCC
T ss_pred eccCCCCCcccCCceEEEeccCCcCCcccHHHHHHHHHhhc--CCCCeEEEEEccCCCCcccc--cccccccccccCcch
Confidence 2 2 2433341 2488889988876432 23368999999999999975 110
Q ss_pred ------------------------------------------------------CCcEEEEeccCCCCccccccCCCCCC
Q 015099 152 ------------------------------------------------------GLNIYATTASNAEESSWGTYCPGEIP 177 (413)
Q Consensus 152 ------------------------------------------------------~~nv~~~tAs~~~EsSy~~~~~~~~~ 177 (413)
.-+|+.++++..++.|.-+.-..
T Consensus 217 ~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~SgCkD~QtSaD~~~~g--- 293 (350)
T 4f6o_A 217 IWKDVGQDGLQAAISYATGNRAALIGSLGSIFKTVKGGMGNNVDRERVRQIKFSAADVVMLSGSKDNQTSADAVEDG--- 293 (350)
T ss_dssp C---------------------------------------------------CCCSEEEEEEEEC---------------
T ss_pred hhhhccccccchhhhhccccchhhcccchhhhhhhccccccccchhhhhhccCCCCCEEEEEecCCCCchhhhccCC---
Confidence 01456666666666665543221
Q ss_pred CCCCCcccchhhhhhhhhccccccccCccccHHHHHHHHHhhhc
Q 015099 178 GPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTA 221 (413)
Q Consensus 178 ~~~~~~~t~lgD~fs~~wme~~~~~~~~~~Tl~~~f~~v~~~t~ 221 (413)
.. .-.||+++++-... .+..|..+++..++....
T Consensus 294 ---~~-----~GAmTyafi~aL~~--~p~~tY~~Ll~~~r~~L~ 327 (350)
T 4f6o_A 294 ---QN-----TGAMSHAFIKVMTL--QPQQSYLSLLQNMRKELA 327 (350)
T ss_dssp ----C-----CCHHHHHHHHHHHH--CCCCBHHHHHHHHHHHHT
T ss_pred ---ce-----eehhHHHHHHHHHH--CCCCCHHHHHHHHHHHHH
Confidence 12 23688888875543 366799999999987665
No 4
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*
Probab=98.61 E-value=3.3e-07 Score=93.15 Aligned_cols=157 Identities=10% Similarity=0.094 Sum_probs=109.5
Q ss_pred hhhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC
Q 015099 21 CIKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 100 (413)
Q Consensus 21 ~n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~ 100 (413)
.++-.+.+.|+++|++ +.+. .|+|.+++.+.|.--. .+ ..+.|.+++||+|||..
T Consensus 27 ~DA~~L~~~L~~lGF~---V~~l------------~DlT~~eI~~aL~~f~-------~~---~~~~D~~l~yfsGHG~~ 81 (390)
T 3uoa_B 27 VDVYELTNLLRQLDFK---VVSL------------LDLTEYEMRNAVDEFL-------LL---LDKGVYGLLYYAGHGYE 81 (390)
T ss_dssp HHHHHHHHHHHHTTCE---EEEE------------ESCCHHHHHHHHHHHH-------HT---CCTTCEEEEEEESCEEE
T ss_pred HHHHHHHHHHHHcCCe---EEEe------------ecCCHHHHHHHHHHHH-------hh---CCCCCEEEEEEecCccc
Confidence 5788999999999996 2221 2589999999998321 11 25679999999999954
Q ss_pred ----CCcCCCCCC-------CCCHHHHHHHHHHHHHcCCCceEEEeeecccccccccc------cCCCCCcEEEEeccCC
Q 015099 101 ----GVLGMPTSR-------YIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEG------LLPEGLNIYATTASNA 163 (413)
Q Consensus 101 ----g~l~fp~~~-------~l~a~dL~~~l~~m~~~~~y~~~v~~iEaC~SgSm~~~------~l~~~~nv~~~tAs~~ 163 (413)
++|.--|.. .+..++|.+.|+.. .=|..+|+++||++|..++. .+|...|++...|+.+
T Consensus 82 ~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~l~~~----~~K~kL~ILDACrg~~~~~~~~~~~~~ip~~ad~Li~yAT~p 157 (390)
T 3uoa_B 82 NFGNSFMVPVDAPNPYRSENCLCVQNILKLMQEK----ETGLNVFLLDMCRKRNDYDDTIPILDALKVTANIVFGYATCQ 157 (390)
T ss_dssp ETTEEEECCTTCCSSCCGGGSEEHHHHHHHHHHT----TCSEEEEEEESCCCCCTTCCCCCCCCCCCCCSCEEEEESSCT
T ss_pred cCCcceEEecCCCccccccceeeHHHHHHHHHhc----CCCceEEEEECCCCCCcccccccccccCcccCCcEEEEEcCC
Confidence 454433432 35666666666543 44778999999999755542 2344458999999999
Q ss_pred CCccccccCCCCCCCCCCCcccchhhhhhhhhccccccccCccccHHHHHHHHHhhhc
Q 015099 164 EESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTA 221 (413)
Q Consensus 164 ~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~~~~~~~~~~Tl~~~f~~v~~~t~ 221 (413)
++.||-...++ ..+ -+|+....+-... ..+|.+++..|.+++.
T Consensus 158 G~~A~r~~~d~-------~~g----S~FtqaL~e~L~~----~~dl~~LLt~Vn~~Va 200 (390)
T 3uoa_B 158 GAEAFEIQHSG-------LAN----GIFMKFLKDRLLE----DKKITVLLDEVAEDMG 200 (390)
T ss_dssp TCCCEECSSCT-------TCC----CHHHHHHTTTTTC----SSCHHHHHHHHHHHHT
T ss_pred CcEeeecCCCC-------CCC----CHHHHHHHHHHcc----CCCHHHHHHHHHHHHh
Confidence 99999863221 222 2677766654432 5789999999999986
No 5
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=94.68 E-value=0.056 Score=52.05 Aligned_cols=162 Identities=15% Similarity=0.180 Sum_probs=97.1
Q ss_pred hhhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC
Q 015099 21 CIKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 100 (413)
Q Consensus 21 ~n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~ 100 (413)
.++-.+-++|+++|+. +.+ ..++|.+.+.++|+--. .+ +-...|-+++||.+||..
T Consensus 56 ~Da~~L~~~f~~LGF~---V~~------------~~dlt~~em~~~l~~~~-------~~--dh~~~d~~v~~~lsHG~~ 111 (272)
T 1m72_A 56 VDSDNLSKVLKTLGFK---VTV------------FPNLKSEEINKFIQQTA-------EM--DHSDADCLLVAVLTHGEL 111 (272)
T ss_dssp HHHHHHHHHHHHTTCE---EEE------------EESCCHHHHHHHHHHHH-------TS--CCTTEEEEEEEEESCEET
T ss_pred HHHHHHHHHHHHCCCE---EEE------------ecCcCHHHHHHHHHHHH-------Hh--hcCCCCEEEEEEcCCCCC
Confidence 4566788888888874 111 24678889988887321 11 113457788899999999
Q ss_pred CCcCCCCCCCCCHHHHHHHHHHHH-HcCCCceEEEeeecccccccccc----------------cCCCCCcEEEEeccCC
Q 015099 101 GVLGMPTSRYIYADELIDVLKKKH-ASGNYKSLVFYLEACESGSIFEG----------------LLPEGLNIYATTASNA 163 (413)
Q Consensus 101 g~l~fp~~~~l~a~dL~~~l~~m~-~~~~y~~~v~~iEaC~SgSm~~~----------------~l~~~~nv~~~tAs~~ 163 (413)
|.|.--|+. +.-++|.+.|..-. ..-.=|=-+|+|+||...-+-.+ .+|...++++.=|+.+
T Consensus 112 ~~i~~~D~~-v~l~~i~~~f~~~~cpsL~gKPKlffiqACRg~~~~~g~~~~~~~~d~~~~~~~~iP~~aD~Li~ysT~p 190 (272)
T 1m72_A 112 GMLYAKDTH-YKPDNLWYYFTADKCPTLAGKPKLFFIQACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVP 190 (272)
T ss_dssp TEEECSSSE-ECTTHHHHTTSTTTCGGGTTSCEEEEEESCSSSBCBCCEEEEC---------CEEECTTCSEEEEESSCT
T ss_pred CEEEecCCc-EEHHHHHHHhccccChhhcCCceEEEEeCCCCCcccCCccccccccccccccccccCCCCCEEEEEeCCC
Confidence 988776764 66666666554210 00112335888999985433111 1343346777777777
Q ss_pred CCccccccCCCCCCCCCCCcccchhhhhhhhhccccccccCccccHHHHHHHHHhhhcc
Q 015099 164 EESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 222 (413)
Q Consensus 164 ~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~~~~~~~~~~Tl~~~f~~v~~~t~~ 222 (413)
+.-||-. +..|+ +|.-...+.... .-..+.|.+++..|.+++..
T Consensus 191 G~vs~r~----------~~~GS----~fiq~L~~~l~~-~~~~~dl~~ilt~V~~~V~~ 234 (272)
T 1m72_A 191 GYFSWRN----------TTRGS----WFMQALCEELRY-AGTERDILTLLTFVCQKVAL 234 (272)
T ss_dssp TBCCEEE----------TTTEE----HHHHHHHHHHHH-HTTTSCHHHHHHHHHHHHHH
T ss_pred CcEeecC----------CCCCC----HHHHHHHHHHHh-hCCCCCHHHHHHHHHHHHHH
Confidence 7777653 12333 333333322221 12457899999999988863
No 6
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=94.34 E-value=0.049 Score=51.72 Aligned_cols=161 Identities=12% Similarity=0.139 Sum_probs=96.3
Q ss_pred hhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCC
Q 015099 22 IKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG 101 (413)
Q Consensus 22 n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~g 101 (413)
++-.+-++|+++|+. +.+ ..++|.+.+.++|+--. .+ .-...|-.++||.+||..|
T Consensus 42 D~~~l~~~f~~LgF~---V~~------------~~dlt~~em~~~l~~~~-------~~--~~~~~d~~v~~~lsHG~~g 97 (250)
T 2j32_A 42 DAANLRETFRNLKYE---VRN------------KNDLTREEIVELMRDVS-------KE--DHSKRSSFVCVLLSHGEEG 97 (250)
T ss_dssp HHHHHHHHHHHTTCE---EEE------------EESCCHHHHHHHHHHHH-------TS--CCTTEEEEEEEEESCEETT
T ss_pred HHHHHHHHHHHCCCE---EEE------------EeCCCHHHHHHHHHHHH-------Hh--hccCCCEEEEEECCCCCCC
Confidence 788899999999985 111 23678899999887221 11 1134567888999999999
Q ss_pred CcCCCCCCCCCHHHHHHHHHHHH-HcCCCceEEEeeecccccccccc--------------cCCCCCcEEEEeccCCCCc
Q 015099 102 VLGMPTSRYIYADELIDVLKKKH-ASGNYKSLVFYLEACESGSIFEG--------------LLPEGLNIYATTASNAEES 166 (413)
Q Consensus 102 ~l~fp~~~~l~a~dL~~~l~~m~-~~~~y~~~v~~iEaC~SgSm~~~--------------~l~~~~nv~~~tAs~~~Es 166 (413)
.|.--|+ .+.-++|.+.|..-. ..-.=|=-+|+|+||...-+-.+ .+|...++++.=|+.++.-
T Consensus 98 ~i~~~D~-~v~l~~i~~~f~~~~cp~L~gKPKlf~iqACRg~~~~~g~~~~~~~~~~~~~~~ip~~aD~Li~ysT~pG~v 176 (250)
T 2j32_A 98 IIFGTNG-PVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGIATDSGVDDDMACHKIPVEADFLYAYSTAPGYY 176 (250)
T ss_dssp EEEETTE-EEEHHHHHHTTSTTTCGGGTTSCEEEEEESCSEEECBCCCCC----------CCCCTTTTEEEEESSCTEEC
T ss_pred eEEecCC-cEEHHHHHHHhccccChhHcCCCeEEEEecccCCcccCCccccCCccccccccccCCCCCEEEEEeCCCccE
Confidence 7765565 466666555543200 00112335889999976432111 1343346777777777766
Q ss_pred cccccCCCCCCCCCCCcccchhhhhhhhhccccccccCccccHHHHHHHHHhhhcc
Q 015099 167 SWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 222 (413)
Q Consensus 167 Sy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~~~~~~~~~~Tl~~~f~~v~~~t~~ 222 (413)
||-. +..|+ +|.-...+-... .-....|.+++..|.+++..
T Consensus 177 s~r~----------~~~gS----~fiq~L~~~l~~-~~~~~dl~~ilt~V~~~V~~ 217 (250)
T 2j32_A 177 SWRN----------SKDGS----WFIQSLCAMLKQ-YADKLEFMHILTRVNRKVAT 217 (250)
T ss_dssp CEEE----------TTTEE----HHHHHHHHHHHH-HTTTSCHHHHHHHHHHHHHH
T ss_pred EecC----------CCCCc----HHHHHHHHHHHH-hCCCCCHHHHHHHHHHHHHH
Confidence 6654 12333 333332222211 12457899999999888865
No 7
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=94.29 E-value=0.058 Score=52.89 Aligned_cols=162 Identities=12% Similarity=0.131 Sum_probs=96.2
Q ss_pred hhhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC
Q 015099 21 CIKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 100 (413)
Q Consensus 21 ~n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~ 100 (413)
.++-.+-++|+++|+. +.+ ..++|.+.+.++|.-- . .+ . -...|-+++||.+||..
T Consensus 94 ~Da~~L~~~f~~LGF~---V~~------------~~dlt~~em~~~l~~~-~------~~-~-h~~~d~~vv~ilsHG~~ 149 (305)
T 1f1j_A 94 KDAEALFKCFRSLGFD---VIV------------YNDCSCAKMQDLLKKA-S------EE-D-HTNAACFACILLSHGEE 149 (305)
T ss_dssp HHHHHHHHHHHHHTEE---EEE------------EESCCHHHHHHHHHHH-H------HS-C-GGGEEEEEEEEESCEET
T ss_pred HHHHHHHHHHHHCCCE---EEE------------ecCcCHHHHHHHHHHH-H------Hh-h-cCCCCEEEEEEecCCCC
Confidence 5778888999999984 111 2367889999888731 1 11 1 12356788999999999
Q ss_pred CCcCCCCCCCCCHHHHHHHHHHHH-HcCCCceEEEeeecccccccccc-----------------cCCCCCcEEEEeccC
Q 015099 101 GVLGMPTSRYIYADELIDVLKKKH-ASGNYKSLVFYLEACESGSIFEG-----------------LLPEGLNIYATTASN 162 (413)
Q Consensus 101 g~l~fp~~~~l~a~dL~~~l~~m~-~~~~y~~~v~~iEaC~SgSm~~~-----------------~l~~~~nv~~~tAs~ 162 (413)
|.|.--|+ .+.-++|...|..-. ..-.=|=-+|+|+||...-+-.+ .+|...++++.=|+.
T Consensus 150 ~~i~g~D~-~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~~~g~~~~~~~~~~~~~~~~~~ip~~aD~LiayST~ 228 (305)
T 1f1j_A 150 NVIYGKDG-VTPIKDLTAHFRGDRSKTLLEKPKLFFIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTV 228 (305)
T ss_dssp TEEECSSS-EEEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSBCBCCBC---------------CBCTTTTEEEEESSC
T ss_pred CeEEecCC-eEEHHHHHHHhhhccChhhcCCceEEEeccccCCcccCCccccCCcccccccccccccCCCCCEEEEEECC
Confidence 98766665 366666655443100 00012345889999987543222 133334677777777
Q ss_pred CCCccccccCCCCCCCCCCCcccchhhhhhhhhccccccccCccccHHHHHHHHHhhhcc
Q 015099 163 AEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 222 (413)
Q Consensus 163 ~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~~~~~~~~~~Tl~~~f~~v~~~t~~ 222 (413)
++.-||-. +..|+ +|.-...+-... .-....|.++|..|.+++..
T Consensus 229 pG~vs~r~----------~~~GS----~FiqaL~~~l~~-~~~~~dl~~ilt~Vn~~V~~ 273 (305)
T 1f1j_A 229 PGYYSWRS----------PGRGS----WFVQALCSILEE-HGKDLEIMQILTRVNDRVAR 273 (305)
T ss_dssp TTBCCEEE----------TTTEE----HHHHHHHHHHHH-HTTTSCHHHHHHHHHHHHHH
T ss_pred CCeeccCC----------CCCCC----HHHHHHHHHHHh-hCCCCCHHHHHHHHHHHHHH
Confidence 77666643 12233 333333222211 12347899999999988865
No 8
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=94.18 E-value=0.09 Score=50.56 Aligned_cols=163 Identities=16% Similarity=0.176 Sum_probs=96.5
Q ss_pred hhhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC
Q 015099 21 CIKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 100 (413)
Q Consensus 21 ~n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~ 100 (413)
.++-.+-++++++|+. +.+ ..++|.+.+.++|+--. .+ .-...|-++++|.+||..
T Consensus 49 ~D~~~L~~~f~~LGF~---V~~------------~~dlt~~em~~~l~~~~-------~~--~h~~~d~~v~~ilSHG~~ 104 (271)
T 3h11_B 49 LDAGALTTTFEELHFE---IKP------------HDDCTVEQIYEILKIYQ-------LM--DHSNMDCFICCILSHGDK 104 (271)
T ss_dssp HHHHHHHHHHHHTTCE---EEE------------EESCCHHHHHHHHHHHH-------HS--CCTTCSCEEEEEESCEET
T ss_pred HHHHHHHHHHHHCCCE---EEE------------EeCCCHHHHHHHHHHHH-------Hh--cCCCCCEEEEEEEcCCcC
Confidence 4678889999999985 111 24688999999998321 11 113456778888889999
Q ss_pred CCcCCCCCCCCCHHHHHHHHHHHH-HcCCCceEEEeeecccccccccc-----------------------cCCCCCcEE
Q 015099 101 GVLGMPTSRYIYADELIDVLKKKH-ASGNYKSLVFYLEACESGSIFEG-----------------------LLPEGLNIY 156 (413)
Q Consensus 101 g~l~fp~~~~l~a~dL~~~l~~m~-~~~~y~~~v~~iEaC~SgSm~~~-----------------------~l~~~~nv~ 156 (413)
|.|.--|+..+.-++|.+.|..-. ..-.=|=-+|+|.||...-+-.+ .+|...+++
T Consensus 105 g~i~g~D~~~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~~~gv~~~~~~~~~~~~e~d~~~~~~~~iP~~aD~L 184 (271)
T 3h11_B 105 GIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQGDNYQKGIPVETASEEQPYLEMALSSPQTRYIPDEADFL 184 (271)
T ss_dssp TEEECTTSCEEEHHHHHGGGSTTTCGGGTTSCEEEEEESCCSSBCC----------------------CCCCSCSSSSEE
T ss_pred CEEEecCCCeecHHHHHHHhhhccChhhcCCccEEEEeccCCCcccCCceeccCCccccccccccccccccccCCCCceE
Confidence 988776765566666655553100 00012345899999976433111 133334666
Q ss_pred EEeccCCCCccccccCCCCCCCCCCCcccchhhhhhhhhccccccccCc-cccHHHHHHHHHhhhcc
Q 015099 157 ATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLR-TETLHQQYELVKTRTAS 222 (413)
Q Consensus 157 ~~tAs~~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~~~~~~~~-~~Tl~~~f~~v~~~t~~ 222 (413)
+.=|+-++.-||-. +..|+ +|--...+-.... -. .+.|.++|..|.+++..
T Consensus 185 i~yST~pG~vs~R~----------~~~GS----~fIq~L~~~l~~~-~~~~~dl~~ilt~Vn~~V~~ 236 (271)
T 3h11_B 185 LGMATVNNCVSYRN----------PAEGT----WYIQSLCQSLRER-CPRGDDILTILTEVNYEVSN 236 (271)
T ss_dssp EEESSCTTBCCEEE----------TTTEE----HHHHHHHHHHHHH-GGGTCCHHHHHHHHHHHHHT
T ss_pred EEEECCCCceeecC----------CCCCc----HHHHHHHHHHHHh-CCCCCCHHHHHHHHHHHHhh
Confidence 66666666666543 12333 2332222222111 12 57899999999998874
No 9
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=93.85 E-value=0.18 Score=48.07 Aligned_cols=159 Identities=13% Similarity=0.185 Sum_probs=93.1
Q ss_pred hhhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC
Q 015099 21 CIKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 100 (413)
Q Consensus 21 ~n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~ 100 (413)
.++-.+-++|+++|+. +.+ ..++|.+.+.++|.--. .+ +-...|-++++|.+||..
T Consensus 44 ~D~~~L~~~f~~LGF~---V~~------------~~dlt~~em~~~l~~~~-------~~--~h~~~d~~v~~~lsHG~~ 99 (259)
T 3sir_A 44 VDCENLTRVLKQLDFE---VTV------------YKDCRYKDILRTIEYSA-------SQ--NHSDSDCILVAILSHGEM 99 (259)
T ss_dssp CHHHHHHHHHHHTTCE---EEE------------EEECSHHHHHHHHHHHH-------TS--CCTTEEEEEEEEEECTTC
T ss_pred HHHHHHHHHHHHCCCE---EEE------------EeCCCHHHHHHHHHHHH-------Hh--hccCCCEEEEEEecCCCC
Confidence 4678888899999885 111 23678889988887321 11 124567788899999999
Q ss_pred CCcCCCCCCCCCHHHHHHHHHHHHHcC----CCceEEEeeecccccccccc------------------cCCCCCcEEEE
Q 015099 101 GVLGMPTSRYIYADELIDVLKKKHASG----NYKSLVFYLEACESGSIFEG------------------LLPEGLNIYAT 158 (413)
Q Consensus 101 g~l~fp~~~~l~a~dL~~~l~~m~~~~----~y~~~v~~iEaC~SgSm~~~------------------~l~~~~nv~~~ 158 (413)
|.|.=-|+. + .|.+.++.+...+ .=|=-+|+|+||...-+-.+ .+|...++++.
T Consensus 100 g~i~~~D~~-v---~l~~i~~~f~~~~cpsL~gKPKlf~iQACRG~~~~~g~~~~~~~~~~dg~~~~~~~ip~~aD~Li~ 175 (259)
T 3sir_A 100 GYIYAKDTQ-Y---KLDNIWSFFTANHCPSLAGKPKLFFIQACQGDRLDGGVTMQRSQTETDGDSSMSYKIPVHADFLIA 175 (259)
T ss_dssp CCCCCTTHH-H---HHHHTTGGGSTTTCGGGSSSCEEEEEEEETTSCEEC-----------------CEECCCCTTEEEE
T ss_pred CeEEeCCCc-E---EHHHHHHHhhhccCccccCCCCEEEEecCCCCcccCCcccccCcccccCcccccccCCCCCCEEEE
Confidence 977544432 3 4444444332211 12445899999997543222 12333366666
Q ss_pred eccCCCCccccccCCCCCCCCCCCcccchhhhhhhhhccccccccCccccHHHHHHHHHhhhcc
Q 015099 159 TASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 222 (413)
Q Consensus 159 tAs~~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~~~~~~~~~~Tl~~~f~~v~~~t~~ 222 (413)
=|+.++.-||-. +..|+ +|.-...+-... .-..+.|.+++..|.+++..
T Consensus 176 yST~pG~vs~r~----------~~~GS----~fiq~L~~~l~~-~~~~~dl~~ilt~V~~~V~~ 224 (259)
T 3sir_A 176 YSTVPGFYSWRN----------TTRGS----WFMQSLCAELAA-NGKRLDILTLLTFVCQRVAV 224 (259)
T ss_dssp EEEECCSCCCSS----------CCCSC----HHHHHHHHHHHH-HTTTSCHHHHHHHHHHHHHT
T ss_pred EECCCCeEeecC----------CCCCc----HHHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHH
Confidence 666666666543 12233 333333322211 12357899999999998874
No 10
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=93.30 E-value=0.17 Score=48.82 Aligned_cols=177 Identities=11% Similarity=0.121 Sum_probs=104.6
Q ss_pred ceeeeccccc----ccchhh--hhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCC
Q 015099 6 VWVELYRSLY----SYSHYC--IKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSG 79 (413)
Q Consensus 6 ~~v~~sr~~~----nyrH~~--n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~ 79 (413)
+|+.=..|-+ .-|.-+ ++-.+-++|+++|+. +.+ ..++|.+.+.++|.--. .
T Consensus 48 LIInN~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~---V~~------------~~dlt~~em~~~l~~f~-------~ 105 (277)
T 4ehd_A 48 IIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYE---VRN------------KNDLTREEIVELMRDVS-------K 105 (277)
T ss_dssp EEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCE---EEE------------EESCCHHHHHHHHHHHH-------T
T ss_pred EEEEchhcCCcCCCCCCCCCHHHHHHHHHHHHHCCCE---EEE------------ecCCCHHHHHHHHHHHH-------h
Confidence 3444444433 245555 788899999999985 111 24688899999988321 1
Q ss_pred ccccCCCCCeEEEEeecCCCCCCcCCCCCCCCCHHHHHHHHHHHH-HcCCCceEEEeeeccccccccccc----------
Q 015099 80 KVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNYKSLVFYLEACESGSIFEGL---------- 148 (413)
Q Consensus 80 kvl~s~~~D~VFiY~t~HG~~g~l~fp~~~~l~a~dL~~~l~~m~-~~~~y~~~v~~iEaC~SgSm~~~~---------- 148 (413)
+ +-...|-++++|.+||..|.|.--|+. +.-++|.+.|..-. ..-.=|=-+|+|+||...-+-.++
T Consensus 106 ~--dh~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~~~g~~~~~~~~~~~ 182 (277)
T 4ehd_A 106 E--DHSKRSSFVCVLLSHGEEGIIFGTNGP-VDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGIETDSGVDDDM 182 (277)
T ss_dssp S--CCTTEEEEEEEEESCEETTEEEETTEE-EEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSBCBCCCCC--------
T ss_pred h--cccCCCEEEEEEEcCCCCCEEEEeCCc-EeHHHHHHHhhhccCchhcCCccEEEEecCCCCcccCCccccCCccccc
Confidence 1 123457788889999999988666663 66666555443100 001224458899999865432221
Q ss_pred ----CCCCCcEEEEeccCCCCccccccCCCCCCCCCCCcccchhhhhhhhhccccccccCccccHHHHHHHHHhhhcc
Q 015099 149 ----LPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 222 (413)
Q Consensus 149 ----l~~~~nv~~~tAs~~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~~~~~~~~~~Tl~~~f~~v~~~t~~ 222 (413)
+|...++++.=|+.++.-||-. +..|+ +|.-...+-... .-....|.+++..|.+++..
T Consensus 183 ~~~~ip~~aD~Li~yST~pG~vs~r~----------~~~GS----~fIq~L~~~l~~-~~~~~dl~~ilt~V~~~V~~ 245 (277)
T 4ehd_A 183 ACHKIPVEADFLYACSTAPGYYSWRN----------SKDGS----WFIQSLCAMLKQ-YADKLEFMHILTRVNRKVAT 245 (277)
T ss_dssp --CCCCTTTTEEEEESSCTTBCCEEE----------TTTEE----HHHHHHHHHHHH-HTTTSCHHHHHHHHHHHHHH
T ss_pred cccccCCCCCEEEEEECCCCeEeecC----------CCCCc----HHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHH
Confidence 2333467777777776666643 12233 333333322211 12357899999999988874
No 11
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=93.17 E-value=0.11 Score=50.99 Aligned_cols=162 Identities=14% Similarity=0.166 Sum_probs=93.5
Q ss_pred hhhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC
Q 015099 21 CIKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 100 (413)
Q Consensus 21 ~n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~ 100 (413)
.++-.+-.+|+++|+. +.+ ..++|.+.+.++|+--. .+ .-...|-+++||.+||..
T Consensus 84 ~Da~~L~~~f~~LGF~---V~~------------~~dlt~~em~~~l~~f~-------~~--dh~~~D~~vv~ilSHG~~ 139 (310)
T 2nn3_C 84 VDSDNLSKVLKTLGFK---VTV------------FPNLKSEEINKFIQQTA-------EM--DHSDADCLLVAVLTAGEL 139 (310)
T ss_dssp HHHHHHHHHHHHTTCE---EEE------------EESCCHHHHHHHHHHHH-------SS--CGGGBSCEEEEEEEEEET
T ss_pred HHHHHHHHHHHHCCCE---EEE------------ecCCCHHHHHHHHHHHH-------Hh--ccCCCCEEEEEEeCCCCC
Confidence 3556677777777763 111 24678888888887321 11 012356688888889999
Q ss_pred CCcCCCCCCCCCHHHHHHHHHHHH-HcCCCceEEEeeecccccccccc----------------cCCCCCcEEEEeccCC
Q 015099 101 GVLGMPTSRYIYADELIDVLKKKH-ASGNYKSLVFYLEACESGSIFEG----------------LLPEGLNIYATTASNA 163 (413)
Q Consensus 101 g~l~fp~~~~l~a~dL~~~l~~m~-~~~~y~~~v~~iEaC~SgSm~~~----------------~l~~~~nv~~~tAs~~ 163 (413)
|.|.--|+. +.-++|.+.|..-. ..-.=|=-+|+|+||...-+-.+ .+|...++++.=|+.+
T Consensus 140 g~i~g~D~~-v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~d~g~~~~~~~~d~~~~~~~~iP~~aD~LiayST~p 218 (310)
T 2nn3_C 140 GMLYAKDTH-YKPDNLWYYFTADKCPTLAGKPKLFFIQACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVP 218 (310)
T ss_dssp TEEECSSCE-ECTHHHHGGGSTTTCGGGTTSCEEEEEEEECCCCCCCCC-------------CCCCCCSTTEEEEECCCC
T ss_pred CEEEecCCc-EEHHHHHHHhccccChhhcCCceEEEEecccCCccccCccccccccccccccccccCCCCCEEEEEeCCC
Confidence 988776764 66666665554200 00112345889999986443111 1333336777667676
Q ss_pred CCccccccCCCCCCCCCCCcccchhhhhhhhhccccccccCccccHHHHHHHHHhhhcc
Q 015099 164 EESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 222 (413)
Q Consensus 164 ~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~~~~~~~~~~Tl~~~f~~v~~~t~~ 222 (413)
+.-||-. +..|+ +|.-...+-... .-..+.|.++|..|.+++..
T Consensus 219 G~vS~R~----------~~~GS----wFIqaL~~~l~~-~~~~~dl~~ilt~Vn~~V~~ 262 (310)
T 2nn3_C 219 GYFSWRN----------TTRGS----WFMQALCEELRY-AGTERDILTLLTFVCQKVAL 262 (310)
T ss_dssp CEEESSS----------SEEEE----HHHHHHHHHHHT-TTTTSCHHHHHHHHHHHHHH
T ss_pred CceeecC----------CCCCC----HHHHHHHHHHHh-hCCCCCHHHHHHHHHHHHHH
Confidence 6655543 12333 333333332221 22457899999999988863
No 12
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=93.03 E-value=0.18 Score=48.60 Aligned_cols=162 Identities=14% Similarity=0.124 Sum_probs=94.8
Q ss_pred hhhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC
Q 015099 21 CIKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 100 (413)
Q Consensus 21 ~n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~ 100 (413)
.++-.+-++++++|+. +.+ ..++|.+.+.++|+-- . .+ +-...|-++++|.+||..
T Consensus 46 ~D~~~L~~~f~~LGF~---V~~------------~~dlt~~em~~~l~~~-~------~~--~h~~~d~~vv~ilSHG~~ 101 (278)
T 3od5_A 46 ADRDNLTRRFSDLGFE---VKC------------FNDLKAEELLLKIHEV-S------TV--SHADADCFVCVFLSHGEG 101 (278)
T ss_dssp HHHHHHHHHHHHTTCE---EEE------------EESCCHHHHHHHHHHH-H------HS--CCTTBSCEEEEEESCEET
T ss_pred HHHHHHHHHHHHCCCE---EEE------------ecCCCHHHHHHHHHHH-H------hh--cccCCCEEEEEEECCCCC
Confidence 4677888999999984 111 2468899999999832 1 11 113457778888889999
Q ss_pred CCcCCCCCCCCCHHHHHHHHHHHH-HcCCCceEEEeeeccccccccccc---------------------------CCCC
Q 015099 101 GVLGMPTSRYIYADELIDVLKKKH-ASGNYKSLVFYLEACESGSIFEGL---------------------------LPEG 152 (413)
Q Consensus 101 g~l~fp~~~~l~a~dL~~~l~~m~-~~~~y~~~v~~iEaC~SgSm~~~~---------------------------l~~~ 152 (413)
|.|.--|+. +.-++|.+.|..-. ..-.=|=-+|+|.||...-+-.++ +|..
T Consensus 102 g~i~g~D~~-v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~iP~~ 180 (278)
T 3od5_A 102 NHIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAG 180 (278)
T ss_dssp TEEECSSSE-EEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSBCBCEECCC---------------------CCCEETT
T ss_pred CEEEEeCCe-EEHHHHHHHhccccChhhcCCCcEEEEecCCCCcccCCeecccccccccccccccccccccccccccCCC
Confidence 988776765 66666666554200 000123458899999965432221 1222
Q ss_pred CcEEEEeccCCCCccccccCCCCCCCCCCCcccchhhhhhhhhccccccccCccccHHHHHHHHHhhhcc
Q 015099 153 LNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 222 (413)
Q Consensus 153 ~nv~~~tAs~~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~~~~~~~~~~Tl~~~f~~v~~~t~~ 222 (413)
.++++.=|+.++.-||-. +..|+ +|--...+-... .-..+.|.++|..|.+++..
T Consensus 181 aD~Li~yST~pG~vs~R~----------~~~GS----~fIq~L~~~l~~-~~~~~dl~~ilt~Vn~~V~~ 235 (278)
T 3od5_A 181 ADFLMCYSVAEGYYSHRE----------TVNGS----WYIQDLCEMLGK-YGSSLEFTELLTLVNRKVSQ 235 (278)
T ss_dssp TTEEEEESSCTTBCCEEE----------TTTEE----HHHHHHHHHHHH-HTTTSCHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCeEEecC----------CCCCc----HHHHHHHHHHHh-hCCCCCHHHHHHHHHHHHHH
Confidence 245555555555555543 12233 222222221111 12357899999999988875
No 13
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=92.32 E-value=0.31 Score=46.71 Aligned_cols=98 Identities=13% Similarity=0.210 Sum_probs=58.1
Q ss_pred hhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC-
Q 015099 22 IKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP- 100 (413)
Q Consensus 22 n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~- 100 (413)
++-.+-++|+++|+.- .+ ..++|.+.+.++|.--. .+ .. ...|-.+++|-+||..
T Consensus 47 D~~~L~~~f~~LgF~V---~~------------~~dlt~~em~~~l~~~~-------~~-~h-~~~D~~vv~ilSHG~~~ 102 (277)
T 1nw9_B 47 DCEKLRRRFSSLHFMV---EV------------KGDLTAKKMVLALLELA-------RQ-DH-GALDCCVVVILSHGCQA 102 (277)
T ss_dssp HHHHHHHHHHHTTEEE---EE------------EESCCHHHHHHHHHHHH-------HS-CC-TTCSEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHCCCEE---EE------------EcCCCHHHHHHHHHHHH-------Hh-hc-ccCCeEEEEEeCCCCcc
Confidence 6777888899998741 11 24678899999887221 11 11 2346677788889987
Q ss_pred ------CCcCCCCCCCCCHHHHHHHHHHHH-HcCCCceEEEeeecccccc
Q 015099 101 ------GVLGMPTSRYIYADELIDVLKKKH-ASGNYKSLVFYLEACESGS 143 (413)
Q Consensus 101 ------g~l~fp~~~~l~a~dL~~~l~~m~-~~~~y~~~v~~iEaC~SgS 143 (413)
|.|.--|+..+.-++|.+.|..-. ..-.=|=-+|+|+||...-
T Consensus 103 ~~~~~~g~iy~~D~~~v~l~~i~~~f~~~~CpsL~gKPKlffiQACRG~~ 152 (277)
T 1nw9_B 103 SHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQ 152 (277)
T ss_dssp CCSSSCCEEECTTSCEEEHHHHHHTTCTTTCGGGTTSCEEEEEEEEC---
T ss_pred ccccCCCcEEecCCceeeHHHHHHHhcccCChhHcCCCcEEEEeccCCCc
Confidence 766544554466666655443100 0011233588999998543
No 14
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster}
Probab=91.65 E-value=0.28 Score=48.20 Aligned_cols=99 Identities=10% Similarity=0.084 Sum_probs=57.1
Q ss_pred hhhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC
Q 015099 21 CIKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 100 (413)
Q Consensus 21 ~n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~ 100 (413)
.++-.+-++|+++|+. +.+ ..++|.+.+.++|+--. .+ ..+...|-++++|.+||..
T Consensus 84 ~D~~~L~~~f~~LGF~---V~~------------~~dlt~~em~~~l~~f~-------~~-~h~~~~D~~vv~ilSHG~~ 140 (316)
T 2fp3_A 84 KDSKSLIHLFQELNFT---IFP------------YGNVNQDQFFKLLTMVT-------SS-SYVQNTECFVMVLMTHGNS 140 (316)
T ss_dssp HHHHHHHHHHHHTTEE---EEE------------ECSCCHHHHHHHHHHHH-------TS-HHHHTCSCEEEEEESCEEC
T ss_pred HHHHHHHHHHHHCCCE---EEE------------ccCCCHHHHHHHHHHHH-------HH-hhcCCCCEEEEEEccCCCc
Confidence 3455566666666663 111 34678888888887221 11 1121456778888889998
Q ss_pred ----CCcCCCCCCCCCHHHHHHHHHHHH-HcCCCceEEEeeeccccc
Q 015099 101 ----GVLGMPTSRYIYADELIDVLKKKH-ASGNYKSLVFYLEACESG 142 (413)
Q Consensus 101 ----g~l~fp~~~~l~a~dL~~~l~~m~-~~~~y~~~v~~iEaC~Sg 142 (413)
|.|.--|+..+.-++|.+.|..-. ..-.=|=-+|+|+||...
T Consensus 141 ~~g~g~i~g~D~~~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~ 187 (316)
T 2fp3_A 141 VEGKEKVEFRDGSVVDMQKIKDHFQTAKCPYLVNKPKVLMFPFARGD 187 (316)
T ss_dssp CTTCCEEECTTSCEEEHHHHHHTTSTTTCGGGTTSCEEEEESCC---
T ss_pred cCCCCEEEeecCcEEeHHHHHHHhccccChhhcCCceEEEEecCCCC
Confidence 888776776566666655554210 000123458899999864
No 15
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=90.80 E-value=0.8 Score=44.65 Aligned_cols=164 Identities=12% Similarity=0.118 Sum_probs=89.1
Q ss_pred hhhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC
Q 015099 21 CIKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 100 (413)
Q Consensus 21 ~n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~ 100 (413)
.++-.+-++|+++|+. +.+ ..++|.+.+.++|.--.. + .+-...|-+++||.+||..
T Consensus 82 ~Da~~L~~~f~~LGF~---V~~------------~~dlt~~em~~~l~~f~~-------~-~dh~~~d~~vv~~lsHG~~ 138 (302)
T 3e4c_A 82 VDITGMTMLLQNLGYS---VDV------------KKNLTASDMTTELEAFAH-------R-PEHKTSDSTFLVFMSHGIR 138 (302)
T ss_dssp HHHHHHHHHHHHTTCE---EEE------------EESCCHHHHHHHHHHHHT-------C-GGGGGCSCEEEEEEEEEET
T ss_pred HHHHHHHHHHHHCCCE---EEE------------eeCCCHHHHHHHHHHHHh-------h-hccCCCCEEEEEEeccCcC
Confidence 3566777788888874 111 246788999999873211 1 1112345677888899999
Q ss_pred CCcCCCCC-----CCCCHHHHHHHHHHHHH-cCCCceEEEeeeccccccccccc--------------------------
Q 015099 101 GVLGMPTS-----RYIYADELIDVLKKKHA-SGNYKSLVFYLEACESGSIFEGL-------------------------- 148 (413)
Q Consensus 101 g~l~fp~~-----~~l~a~dL~~~l~~m~~-~~~y~~~v~~iEaC~SgSm~~~~-------------------------- 148 (413)
|.|.=-|+ ..+.-++|.+.|..-.- .-.=|=-+|+|+||...-+-..+
T Consensus 139 ~~i~g~D~~~~~~~~v~l~~I~~~F~~~~CpsL~gKPKlffIQACRG~~~~~~~~~ds~~~~~~~~~~~~~~~~~d~~~~ 218 (302)
T 3e4c_A 139 EGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKVIIIQAARGDSPGVVWFKDSVGVSGNLSLPTTEEFEDDAIKK 218 (302)
T ss_dssp TEEECTTCCSSSCCEECHHHHHHHTSTTTCGGGTTSCEEEEEEEECSSSCCCCCCCCC--------CCCCCCCCCHHHHT
T ss_pred CeEEeecccccCCcEEEHHHHHHHHhhhcchhhcCCccEEEEECCCCCCCCcceeccCcccccccccccccccccccccc
Confidence 86533342 33555565555542100 00224458899999975542111
Q ss_pred CCCCCcEEEEeccCCCCccccccCCCCCCCCCCCcccchhhhhhhhhccccccccCccccHHHHHHHHHhhhcc
Q 015099 149 LPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 222 (413)
Q Consensus 149 l~~~~nv~~~tAs~~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~~~~~~~~~~Tl~~~f~~v~~~t~~ 222 (413)
+|...+.++.=|+.++.-||-. +..|+ +|.-...+-.... -..+.|.++|..|..++..
T Consensus 219 ip~~aDfLi~yST~pG~vS~R~----------~~~GS----wFIqaL~~~l~~~-~~~~dl~~il~~V~~~v~~ 277 (302)
T 3e4c_A 219 AHIEKDFIAFCSSTPDNVSWRH----------PTMGS----VFIGRLIEHMQEY-ACSCDVEEIFRKVRFSFEQ 277 (302)
T ss_dssp SCSSCSEEEEEECCCCCCCSSS----------TTCCC----HHHHHHHHHHHHH-TTTSCHHHHHHHHHHHTSS
T ss_pred cCCCCCEEEEEeCCCCceeecC----------CCCCc----HHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHhC
Confidence 1212245555555565555533 12233 3333333222111 1356799999999887753
No 16
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=90.29 E-value=0.23 Score=44.90 Aligned_cols=100 Identities=13% Similarity=0.177 Sum_probs=58.7
Q ss_pred hhhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC
Q 015099 21 CIKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 100 (413)
Q Consensus 21 ~n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~ 100 (413)
.++-.+-.+|+++|+. +.+ ..++|.+.+.+.|+-=. .+ .+-...|-+++||.+||..
T Consensus 65 ~Da~~L~~~f~~LgF~---V~~------------~~dlt~~em~~~l~~f~-------~~-~d~~~~d~~v~~~lsHG~~ 121 (178)
T 2h54_A 65 VDITGMTMLLQNLGYS---VDV------------KKNLTASDMTTELEAFA-------HR-PEHKTSDSTFLVFMSHGIR 121 (178)
T ss_dssp HHHHHHHHHHHHTTCE---EEE------------EESCCHHHHHHHHHHHH-------TC-GGGGGCSCEEEEEESCBCS
T ss_pred HHHHHHHHHHHHCCCE---EEE------------ecCCCHHHHHHHHHHHH-------hh-hhcCCCCEEEEEEecCCCC
Confidence 3455666677777663 111 23588888988887211 01 1112346678888899999
Q ss_pred CCcCCCCCC-----CCCHHHHHHHHHHHH-HcCCCceEEEeeecccccc
Q 015099 101 GVLGMPTSR-----YIYADELIDVLKKKH-ASGNYKSLVFYLEACESGS 143 (413)
Q Consensus 101 g~l~fp~~~-----~l~a~dL~~~l~~m~-~~~~y~~~v~~iEaC~SgS 143 (413)
|.|.-.|+. .+.-++|...|..-. ..-.=|--+|+|+||..+-
T Consensus 122 g~i~g~D~~~~~~~~v~l~~I~~~f~~~~CpsL~gKPKlffiqACRg~~ 170 (178)
T 2h54_A 122 EGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKVIIIQACRGDS 170 (178)
T ss_dssp SCEECTTCCSSSCCEECHHHHHHHHSTTTCGGGTTSCEEEEEESCSSSB
T ss_pred CeEEeecCCcccCcEEEHHHHHHHHhhcCChhhcCCceEEEEECCCCCC
Confidence 877665652 355566555554210 0001245588999999855
No 17
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=78.78 E-value=2.7 Score=40.31 Aligned_cols=98 Identities=5% Similarity=-0.036 Sum_probs=61.6
Q ss_pred hhhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC
Q 015099 21 CIKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 100 (413)
Q Consensus 21 ~n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~ 100 (413)
.++-.+-++++++|+. +.+ ..++|.+.+..+|.--.. + .+-...|-+++++.+||..
T Consensus 54 ~D~~~L~~~f~~LgF~---V~~------------~~dlt~~em~~~l~~~~~-------~-~dh~~~d~~v~~ilSHG~~ 110 (272)
T 3h11_A 54 NETELLRDTFTSLGYE---VQK------------FLHLSMHGISQILGQFAC-------M-PEHRDYDSFVCVLVSRGGS 110 (272)
T ss_dssp CCCSHHHHHHHHHTEE---EEE------------EESCBHHHHHHHHHHHHT-------C-GGGGGCSEEEEEEEEEEET
T ss_pred HHHHHHHHHHHHCCCE---EEE------------eeCCCHHHHHHHHHHHHh-------c-cccCCCCEEEEEEEcCCCC
Confidence 3566667777777763 111 246788999999983211 0 1124578899999999999
Q ss_pred CCcCCCCCC--CCCHHHHHHHHHHHH-HcCCCceEEEeeecccc
Q 015099 101 GVLGMPTSR--YIYADELIDVLKKKH-ASGNYKSLVFYLEACES 141 (413)
Q Consensus 101 g~l~fp~~~--~l~a~dL~~~l~~m~-~~~~y~~~v~~iEaC~S 141 (413)
|.|.=-|+. .+.-++|.+.|..=. ..-.=|--+|+|.||..
T Consensus 111 g~i~g~D~~~~~v~l~~i~~~f~~~~CpsL~gKPKlffiQACRG 154 (272)
T 3h11_A 111 QSVYGVDQTHSGLPLHHIRRMFMGDSCPYLAGKPKMFFIQNYVV 154 (272)
T ss_dssp TEECBTSCCSSCEEHHHHHHHHSTTTCGGGTTSCEEEEEEEEEC
T ss_pred CeEEEEcCCcceEeHHHHHHHhccccChhhcCCCcEEEEECCCC
Confidence 977665664 366666666664210 00022446899999985
No 18
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=76.84 E-value=1.2 Score=39.51 Aligned_cols=100 Identities=17% Similarity=0.180 Sum_probs=65.3
Q ss_pred hhhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC
Q 015099 21 CIKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 100 (413)
Q Consensus 21 ~n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~ 100 (413)
.++-.+-.+++++|+.- . + -.++|.+.+..+|+--. .+ .-...|=+++++-+||..
T Consensus 55 ~D~~~L~~~f~~LgF~V---~---~---------~~dlt~~em~~~l~~~~-------~~--dh~~~dc~vv~ilSHG~~ 110 (164)
T 1qtn_A 55 LDAGALTTTFEELHFEI---K---P---------HDDCTVEQIYEILKIYQ-------LM--DHSNMDCFICCILSHGDK 110 (164)
T ss_dssp HHHHHHHHHHHHTTCEE---E---E---------EESCCHHHHHHHHHHHH-------HS--CCTTCSCEEEEEESCEET
T ss_pred HHHHHHHHHHHHCCCEE---E---E---------ecCCCHHHHHHHHHHHH-------Hh--hccCCCEEEEEeCCCCCC
Confidence 45667888888888741 1 1 23678899998887321 11 113467788899999999
Q ss_pred CCcCCCCCCCCCHHHHHHHHHHHHH-cCCCceEEEeeeccccccc
Q 015099 101 GVLGMPTSRYIYADELIDVLKKKHA-SGNYKSLVFYLEACESGSI 144 (413)
Q Consensus 101 g~l~fp~~~~l~a~dL~~~l~~m~~-~~~y~~~v~~iEaC~SgSm 144 (413)
|.|.-.|+..+.-++|...|..-.- .-.=|=-+|+|.||...-.
T Consensus 111 g~i~g~D~~~v~i~~i~~~F~~~~CpsL~gKPKlFfiQACRG~~~ 155 (164)
T 1qtn_A 111 GIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQGDNY 155 (164)
T ss_dssp TEEECTTSCEEEHHHHHGGGSTTTCGGGTTSCEEEEEESCSSSBC
T ss_pred CEEEeeCCCEeeHHHHHHHhccccChhhcCCCeEEEEECCCCCCc
Confidence 9888878765777777766643100 0112345889999987543
No 19
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=76.11 E-value=1.4 Score=39.36 Aligned_cols=100 Identities=12% Similarity=0.115 Sum_probs=62.9
Q ss_pred hhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCC
Q 015099 22 IKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG 101 (413)
Q Consensus 22 n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~g 101 (413)
++-.+-++++++|+.- .+ ..+.|.+.+...|+--. .+ -+-...|-.++++-+||..|
T Consensus 59 D~~~L~~~f~~LgF~V---~~------------~~dlt~~em~~~l~~~~-------~~-~dh~~~dc~vv~ilSHG~~g 115 (167)
T 1pyo_A 59 DHSTLVTLFKLLGYDV---HV------------LCDQTAQEMQEKLQNFA-------QL-PAHRVTDSCIVALLSHGVEG 115 (167)
T ss_dssp HHHHHHHHHHHTTEEE---EE------------EESCCHHHHHHHHHHHH-------TC-GGGGTSSEEEEEEESCEETT
T ss_pred HHHHHHHHHHHCCCEE---EE------------eeCCCHHHHHHHHHHhh-------hh-hhccCCCEEEEEeCCCCCCC
Confidence 5666777777777631 11 24678888888887221 10 01134577888999999999
Q ss_pred CcCCCCCCCCCHHHHHHHHHHHH-HcCCCceEEEeeeccccccc
Q 015099 102 VLGMPTSRYIYADELIDVLKKKH-ASGNYKSLVFYLEACESGSI 144 (413)
Q Consensus 102 ~l~fp~~~~l~a~dL~~~l~~m~-~~~~y~~~v~~iEaC~SgSm 144 (413)
.|.-.|+..+.-++|...|..-. ..-.=|=-+|+|.||...-.
T Consensus 116 ~i~g~D~~~v~l~~i~~~F~~~~CpsL~gKPKlffiQACRG~~~ 159 (167)
T 1pyo_A 116 AIYGVDGKLLQLQEVFQLFDNANCPSLQNKPKMFFIQACRGDET 159 (167)
T ss_dssp EEECTTSCEEEHHHHHHHTSTTTCGGGTTSCEEEEEESCSSSBC
T ss_pred eEEEeCCCEEcHHHHHHHhcccCChhHcCCCeEEEEECCCCCCC
Confidence 88877876577777776664200 00112345899999987543
No 20
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=65.44 E-value=3 Score=37.68 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=61.7
Q ss_pred hhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCC
Q 015099 22 IKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG 101 (413)
Q Consensus 22 n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~g 101 (413)
++-.+-++++++|+.- .+ -.++|.+.+..+|+-- . .+ .-...|=+++.+-.||..|
T Consensus 70 D~~~L~~~F~~LGF~V---~~------------~~dlt~~em~~~l~~~-~------~~--dh~~~dc~vvvilSHG~~g 125 (179)
T 3p45_A 70 DRDNLTRRFSDLGFEV---KC------------FNDLKAEELLLKIHEV-S------TV--SHADADCFVCVFLSHGEGN 125 (179)
T ss_dssp HHHHHHHHHHHTTCEE---EE------------EESCCHHHHHHHHHHH-H------TS--CCTTBSCEEEEEESCEETT
T ss_pred HHHHHHHHHHHCCCEE---EE------------EeCCCHHHHHHHHHHH-h------hh--hcCCCCEEEEEEeccCCCC
Confidence 4677888888888741 11 1368889999998832 1 11 1235688999999999999
Q ss_pred CcCCCCCCCCCHHHHHHHHHHHH-HcCCCceEEEeeeccccccc
Q 015099 102 VLGMPTSRYIYADELIDVLKKKH-ASGNYKSLVFYLEACESGSI 144 (413)
Q Consensus 102 ~l~fp~~~~l~a~dL~~~l~~m~-~~~~y~~~v~~iEaC~SgSm 144 (413)
.|.--|+. +.-++|.+.|..-. ..-.=|=-+|+|.||...-.
T Consensus 126 ~I~g~D~~-v~l~~I~~~F~~~~CpsL~gKPKlFfIQACRG~~~ 168 (179)
T 3p45_A 126 HIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQH 168 (179)
T ss_dssp EEECSSSE-EEHHHHHGGGSGGGCGGGTTSCEEEEEECC-----
T ss_pred EEEEECCE-EEHHHHHHhcccccChhhCCCCcEEEEECCCCCCC
Confidence 88887876 76667666654210 00122446889999997543
No 21
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=64.78 E-value=2.1 Score=37.23 Aligned_cols=102 Identities=13% Similarity=0.143 Sum_probs=66.3
Q ss_pred cchhh--hhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEe
Q 015099 17 YSHYC--IKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFY 94 (413)
Q Consensus 17 yrH~~--n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~ 94 (413)
-|.-+ ++-.+-++++++|+. +.+ -.+.|.+.+..+|+--. .+ .-...|-.++++
T Consensus 35 ~R~Gt~~D~~~L~~~f~~LgF~---V~~------------~~dlt~~em~~~l~~~~-------~~--dh~~~dc~vv~i 90 (146)
T 2dko_A 35 SRSGTDVDAANLRETFRNLKYE---VRN------------KNDLTREEIVELMRDVS-------KE--DHSKRSSFVCVL 90 (146)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCE---EEE------------EESCCHHHHHHHHHHHH-------HS--CCTTEEEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHCCCE---EEE------------eeCCCHHHHHHHHHHHH-------Hh--hcCCCCeEEEEe
Confidence 35556 778889999999985 111 23678899988887321 11 113457789999
Q ss_pred ecCCCCCCcCCCCCCCCCHHHHHHHHHHHH-HcCCCceEEEeeecccccc
Q 015099 95 SDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNYKSLVFYLEACESGS 143 (413)
Q Consensus 95 t~HG~~g~l~fp~~~~l~a~dL~~~l~~m~-~~~~y~~~v~~iEaC~SgS 143 (413)
-+||..|.|.-.|+ .+.-++|...|..-. ..-.=|=-+|+|.||...-
T Consensus 91 lSHG~~g~i~g~D~-~~~l~~i~~~F~~~~CpsL~gKPKlffiQACRG~~ 139 (146)
T 2dko_A 91 LSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTE 139 (146)
T ss_dssp ESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSB
T ss_pred ccCCCCCEEEEeCC-cEeHHHHHHHhccccChhhcCCCeEEEEECCCCCC
Confidence 99999998877787 466666655553100 0011244588999998754
No 22
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=52.08 E-value=6 Score=35.46 Aligned_cols=98 Identities=11% Similarity=0.109 Sum_probs=61.7
Q ss_pred hhhhhhhHHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC
Q 015099 21 CIKDQPSEYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 100 (413)
Q Consensus 21 ~n~~~~y~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~ 100 (413)
.++-.+-.+++++|+.- .+ -.+.|.+.+..+|+-- . .+ +-...|-+++++-+||..
T Consensus 69 ~D~~~L~~~F~~LgF~V---~v------------~~dlt~~em~~~l~~~-s------~~--dh~~~dc~vvvilSHG~~ 124 (173)
T 2ql9_A 69 KDAEALFKCFRSLGFDV---IV------------YNDCSCAKMQDLLKKA-S------EE--DHTNAACFACILLSHGEE 124 (173)
T ss_dssp HHHHHHHHHHHHHTEEE---EE------------EESCCHHHHHHHHHHH-H------TS--CCTTEEEEEEEEESCEET
T ss_pred HHHHHHHHHHHHCCCEE---EE------------EeCCCHHHHHHHHHHH-H------Hh--hccCCCeEEEeecCCCCC
Confidence 45777888888888731 11 1367889999888731 1 11 113457788999999999
Q ss_pred CCcCCCCCCCCCHHHHHHHHHHHH-HcCCCceEEEeeecccccc
Q 015099 101 GVLGMPTSRYIYADELIDVLKKKH-ASGNYKSLVFYLEACESGS 143 (413)
Q Consensus 101 g~l~fp~~~~l~a~dL~~~l~~m~-~~~~y~~~v~~iEaC~SgS 143 (413)
|.|.-.|+. +.-++|...|..-. ..-.=|=-+|+|.||...-
T Consensus 125 g~I~g~D~~-~~i~~I~~~F~~~~CpsL~gKPKlFfIQACRG~~ 167 (173)
T 2ql9_A 125 NVIYGKDGV-TPIKDLTAHFRGDRCKTLLEKPKLFFIQACRGTE 167 (173)
T ss_dssp TEEEETTEE-EEHHHHHGGGSTTTCGGGTTSCEEEEEESCCSSB
T ss_pred CEEEEcCCc-EEHHHHHHHcCcccChhHcCCCeEEEEECCCCCC
Confidence 988777774 65555555443100 0002244588899998744
No 23
>4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A
Probab=28.57 E-value=59 Score=34.13 Aligned_cols=46 Identities=9% Similarity=0.028 Sum_probs=37.4
Q ss_pred CCCceeeec------------ccccccchhhhhhhhhHHHHhcCCCCCcEEEEeecCC
Q 015099 3 HPFVWVELY------------RSLYSYSHYCIKDQPSEYVIKFFITTTTIIFFMVSSF 48 (413)
Q Consensus 3 ~~~~~v~~s------------r~~~nyrH~~n~~~~y~~l~~~gi~d~~Iil~~~~~~ 48 (413)
.|.+|+||+ .+|+|-.-+.-+..+.+.|.+.|++.+.|-++.+|.+
T Consensus 484 ~p~~f~d~~g~~~~~~~~~~~~s~~N~~EA~~V~~~v~~L~~~gv~~~dIgVItpYra 541 (646)
T 4b3f_X 484 VPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVVSPYNL 541 (646)
T ss_dssp CSEEEEECTTSSCCCCC-----CCCCHHHHHHHHHHHHHHHHHTCCGGGEEEEESCHH
T ss_pred CceEEEecCCCccccccccCCccccCHHHHHHHHHHHHHHHhcCCCcCcEEEECCCHH
Confidence 588999986 3577777777788888888999999999999988753
No 24
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=26.10 E-value=3.7e+02 Score=25.06 Aligned_cols=99 Identities=15% Similarity=0.227 Sum_probs=58.5
Q ss_pred HHHHhcCCCCCcEEEEeecCCccccCCCCCCCHHHHHHHHcCCCCCCC----CCC-CccccCCCCCeEEEEeecCCCCCC
Q 015099 28 EYVIKFFITTTTIIFFMVSSFMWQDYTGEDVTVENFFAVILGNKTALT----GGS-GKVVDSGPNDHIFIFYSDHGGPGV 102 (413)
Q Consensus 28 ~~l~~~gi~d~~Iil~~~~~~v~iDY~g~~vt~~nfl~vL~G~~~~~~----~~s-~kvl~s~~~D~VFiY~t~HG~~g~ 102 (413)
...+++|+....|+|+-.++.-++.|.| +.+.+++.+-|.-...+.. +.+ .+++.+ ....++|+|.....+
T Consensus 73 ~v~~~~~v~~~~i~lfk~f~~~~~~~~g-~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~-~~~~~~v~F~~~~~~-- 148 (361)
T 3uem_A 73 DVFSKYQLDKDGVVLFKKFDEGRNNFEG-EVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGG-EIKTHILLFLPKSVS-- 148 (361)
T ss_dssp HHHHHTTCSSSEEEEEESSTTSEEECCS-CCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSC-SCCEEEEEECCSSSS--
T ss_pred HHHHHhCCCCCeEEEEEecCCCccccCC-cCCHHHHHHHHHHcCCCcceecCcccHHHHhcC-CCCcEEEEEEeCCch--
Confidence 4568899988888888777777889987 5799998888876544322 111 122222 223456666544322
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHcCCCceEEEeeeccc
Q 015099 103 LGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACE 140 (413)
Q Consensus 103 l~fp~~~~l~a~dL~~~l~~m~~~~~y~~~v~~iEaC~ 140 (413)
.-+.+...++++.++-+ .++.|+.=-|.
T Consensus 149 ---------~~~~~~~~~~~~A~~~~-~~i~f~~vd~~ 176 (361)
T 3uem_A 149 ---------DYDGKLSNFKTAAESFK-GKILFIFIDSD 176 (361)
T ss_dssp ---------SHHHHHHHHHHHHGGGT-TTCEEEEECTT
T ss_pred ---------hHHHHHHHHHHHHHHcc-CceEEEEecCC
Confidence 24567777877764322 23444433343
No 25
>4gdk_A Ubiquitin-like protein ATG12; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_A
Probab=24.14 E-value=48 Score=26.45 Aligned_cols=36 Identities=17% Similarity=0.353 Sum_probs=28.1
Q ss_pred CCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCC
Q 015099 55 GEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPG 101 (413)
Q Consensus 55 g~~vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VFiY~t~HG~~g 101 (413)
..+.|...|+.+|+ |.|+-.|++.||+|..+.-.|.
T Consensus 27 p~~~tv~~~~~~lR-----------krL~l~~~~alFlyVnn~~~P~ 62 (91)
T 4gdk_A 27 ERTRTIQGLIDFIK-----------KFLKLVASEQLFIYVNQSFAPS 62 (91)
T ss_dssp ETTCBHHHHHHHHH-----------HHTTCCSSSCCEEEETTTBCCC
T ss_pred CCCCCHHHHHHHHH-----------HHhCCCCCCeEEEEECCccCCC
Confidence 45889999999998 2366688999999997655443
No 26
>3m7v_A Phosphopentomutase; structural genomics, nysgrc, cytoplasm, isomerase, manganese binding, PSI-2, protein structure initiative; 2.00A {Streptococcus mutans}
Probab=21.47 E-value=32 Score=32.55 Aligned_cols=22 Identities=18% Similarity=0.459 Sum_probs=17.2
Q ss_pred CccccCCCCCeEEEEeecCCCC
Q 015099 79 GKVVDSGPNDHIFIFYSDHGGP 100 (413)
Q Consensus 79 ~kvl~s~~~D~VFiY~t~HG~~ 100 (413)
|++|+.=++++|+||.||||.+
T Consensus 324 g~~l~~L~entliiftsDnG~~ 345 (413)
T 3m7v_A 324 PEIIAAMKVDDLLLITADHGND 345 (413)
T ss_dssp HHHHHTCCTTEEEEEECSSBCC
T ss_pred HHHHHhcCCCCEEEEEccCCCC
Confidence 5666655578899999999964
Done!