Your job contains 1 sequence.
>015104
MTTVVPTSEEDPALAVVRFTSELAWADAGPEAAEEQVNRLCLEAQESMVMGRWMDLASLM
LTSADLMFSKVSDKDLECIFTVICNLVTKPESLDEVHEMTKLISGKIIQQPNDKPAMRLK
ILFNLYNLLENPYSRFFVYMKALNLAVNGKVTEHIIPSFKKIDSFLKEWNIDIKDKRALF
LGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKEEAVRTIIEFVKSPDMFQCD
LLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAGNSALLKSYGLVHEDCIAKMR
LMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKARTAKLMDCKMDQMNQVVIVRRC
TERVFGQHQWQTLRTKLSTWRANVANVISTIQATNKITEDGSHSQAVQGLIIR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015104
(413 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2180917 - symbol:AT5G15610 "AT5G15610" species... 1330 1.3e-152 2
TAIR|locus:2076517 - symbol:AT3G02200 "AT3G02200" species... 1467 2.6e-150 1
DICTYBASE|DDB_G0287005 - symbol:DDB_G0287005 "proteasome ... 602 1.2e-58 1
UNIPROTKB|F1SGR0 - symbol:EIF3M "Uncharacterized protein"... 399 3.9e-37 1
UNIPROTKB|F1NZE2 - symbol:EIF3M "Eukaryotic translation i... 398 4.9e-37 1
UNIPROTKB|Q5ZJ64 - symbol:EIF3M "Eukaryotic translation i... 398 4.9e-37 1
UNIPROTKB|E2QWG8 - symbol:EIF3M "Uncharacterized protein"... 397 6.3e-37 1
UNIPROTKB|Q7L2H7 - symbol:EIF3M "Eukaryotic translation i... 397 6.3e-37 1
UNIPROTKB|F1N5F7 - symbol:EIF3M "Eukaryotic translation i... 392 2.1e-36 1
MGI|MGI:1351744 - symbol:Eif3m "eukaryotic translation in... 391 2.7e-36 1
UNIPROTKB|Q3T148 - symbol:EIF3M "Eukaryotic translation i... 390 3.5e-36 1
ZFIN|ZDB-GENE-040426-2643 - symbol:eif3m "eukaryotic tran... 366 1.2e-33 1
UNIPROTKB|A4RK68 - symbol:MGG_01595 "Eukaryotic translati... 337 1.4e-30 1
ZFIN|ZDB-GENE-050913-52 - symbol:zgc:114126 "zgc:114126" ... 319 1.2e-28 1
POMBASE|SPAC1751.03 - symbol:SPAC1751.03 "translation ini... 317 1.9e-28 1
FB|FBgn0033902 - symbol:Tango7 "Transport and Golgi organ... 312 6.4e-28 1
UNIPROTKB|Q292F0 - symbol:Tango7 "Eukaryotic translation ... 295 4.0e-26 1
ASPGD|ASPL0000017804 - symbol:AN4259 species:162425 "Emer... 251 4.7e-19 1
RGD|1565840 - symbol:Eif3m "eukaryotic translation initia... 129 1.5e-14 2
WB|WBGene00019543 - symbol:cif-1 species:6239 "Caenorhabd... 191 2.6e-12 1
UNIPROTKB|Q94261 - symbol:cif-1 "COP9/Signalosome and eIF... 191 2.6e-12 1
GENEDB_PFALCIPARUM|PF10_0298 - symbol:PF10_0298 "26S prot... 142 8.7e-07 1
UNIPROTKB|Q8IJA0 - symbol:PF10_0298 "26S proteasome subun... 142 8.7e-07 1
UNIPROTKB|F1NGK0 - symbol:COPS7A "Uncharacterized protein... 135 2.3e-06 1
UNIPROTKB|F5GYF7 - symbol:COPS7A "COP9 signalosome comple... 126 1.0e-05 1
UNIPROTKB|F1MAA2 - symbol:Cops7a "Protein Cops7a" species... 128 1.5e-05 1
DICTYBASE|DDB_G0271282 - symbol:csn7 "proteasome componen... 126 2.1e-05 1
UNIPROTKB|F5H248 - symbol:COPS7A "COP9 signalosome comple... 126 2.2e-05 1
UNIPROTKB|E2RED3 - symbol:COPS7A "Uncharacterized protein... 126 2.5e-05 1
UNIPROTKB|Q9UBW8 - symbol:COPS7A "COP9 signalosome comple... 126 2.5e-05 1
MGI|MGI:1349400 - symbol:Cops7a "COP9 (constitutive photo... 126 2.5e-05 1
TAIR|locus:2171998 - symbol:AT5G45620 "AT5G45620" species... 128 3.1e-05 1
UNIPROTKB|F5H7C6 - symbol:COPS7A "COP9 signalosome comple... 119 4.1e-05 1
UNIPROTKB|F6QE33 - symbol:COPS7A "Uncharacterized protein... 121 9.1e-05 1
TAIR|locus:504955552 - symbol:AT4G19006 "AT4G19006" speci... 118 0.00040 1
SGD|S000002835 - symbol:RPN9 "Non-ATPase regulatory subun... 115 0.00088 1
>TAIR|locus:2180917 [details] [associations]
symbol:AT5G15610 "AT5G15610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006302 "double-strand break repair" evidence=RCA]
[GO:0006312 "mitotic recombination" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
EMBL:CP002688 GO:GO:0000502 EMBL:AL391143 KO:K15030
HOGENOM:HOG000005880 ProtClustDB:CLSN2687479 EMBL:AY099844
EMBL:BT000340 IPI:IPI00545684 PIR:T51539 RefSeq:NP_197065.1
UniGene:At.25003 ProteinModelPortal:Q9LF21 SMR:Q9LF21 PRIDE:Q9LF21
EnsemblPlants:AT5G15610.1 GeneID:831413 KEGG:ath:AT5G15610
TAIR:At5g15610 InParanoid:Q9LF21 OMA:RCAEREF PhylomeDB:Q9LF21
Genevestigator:Q9LF21 Uniprot:Q9LF21
Length = 442
Score = 1330 (473.2 bits), Expect = 1.3e-152, Sum P(2) = 1.3e-152
Identities = 251/359 (69%), Positives = 307/359 (85%)
Query: 1 MTTVVPTSEEDPALAVVRFTSELAWADAGPEAAEEQVNRLCLEAQESMVMGRWMDLASLM 60
MTT+VPTSEEDP LA+VRFTS+LAWADAGPE AE +V+RLC EA+ES++ G+W+DLA+LM
Sbjct: 1 MTTIVPTSEEDPYLAIVRFTSQLAWADAGPEVAEPEVSRLCKEAEESIINGKWLDLATLM 60
Query: 61 LTSADLMFSKVSDKDLECIFTVICNLVTKPESLDEVHEMTKLISGKIIQQPNDKPAMRLK 120
+TSADL+ +K+S+KDLEC +T+ICNLV S +EV EM K I+ K+IQQPNDK ++RLK
Sbjct: 61 VTSADLVSAKISEKDLECTYTIICNLVKNANSPEEVLEMVKAIAAKVIQQPNDKASLRLK 120
Query: 121 ILFNLYNLLENPYSRFFVYMKALNLAVNGKVTEHIIPSFKKIDSFLKEWNIDIKDKRALF 180
ILFNLYNL+++P +RF VYMKAL LAVNGKVTE+I+PSFKKIDSFLKEWNIDIKD+R LF
Sbjct: 121 ILFNLYNLVDHPNARFQVYMKALELAVNGKVTEYIVPSFKKIDSFLKEWNIDIKDQRELF 180
Query: 181 LGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKEEAVRTIIEFVKSPDMFQCD 240
L IA VL+E++S +K+S +F+T YLATFS ED + EAKEEAVR +IEFVK+P +FQCD
Sbjct: 181 LAIAKVLRENKSFAKESLQFVTNYLATFSNEDTQVLSEAKEEAVRAVIEFVKAPSIFQCD 240
Query: 241 LLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAGNSALLKSYGLVHEDCIAKMR 300
LLD PA+ QLE D A VYQLLKIFLTQRLD Y+EFQ NS L++YGLV EDC+AKMR
Sbjct: 241 LLDHPAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFLQTYGLVEEDCVAKMR 300
Query: 301 LMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKARTAKLMDCKMDQMNQVVIVRR 359
L+SLVDL S++SG+IPY IK+TLQ+N++EVE WVVKA TAKL+ CKMDQMNQVVIVR+
Sbjct: 301 LLSLVDLASDDSGKIPYASIKNTLQVNDEEVELWVVKAITAKLVACKMDQMNQVVIVRQ 359
Score = 180 (68.4 bits), Expect = 1.3e-152, Sum P(2) = 1.3e-152
Identities = 36/58 (62%), Positives = 44/58 (75%)
Query: 357 VRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQATNKITEDGSH-SQAVQGLIIR 413
+ RC ER FGQ QWQ+LRTKL+ WR NV NVISTI++ NK TE+G+ S A QGL +R
Sbjct: 386 ISRCAEREFGQKQWQSLRTKLAAWRDNVRNVISTIES-NKATEEGTQTSSAAQGLTVR 442
>TAIR|locus:2076517 [details] [associations]
symbol:AT3G02200 "AT3G02200" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000502 UniGene:At.41171 eggNOG:NOG253821 KO:K15030
OMA:IQANKVT EMBL:AY062722 EMBL:AY093343 IPI:IPI00518990
RefSeq:NP_186869.2 UniGene:At.21256 UniGene:At.67677
UniGene:At.73005 ProteinModelPortal:Q8W4A0 STRING:Q8W4A0
PaxDb:Q8W4A0 PRIDE:Q8W4A0 DNASU:821267 EnsemblPlants:AT3G02200.2
GeneID:821267 KEGG:ath:AT3G02200 TAIR:At3g02200
HOGENOM:HOG000005880 InParanoid:Q8W4A0 PhylomeDB:Q8W4A0
ProtClustDB:CLSN2687479 Genevestigator:Q8W4A0 Uniprot:Q8W4A0
Length = 417
Score = 1467 (521.5 bits), Expect = 2.6e-150, P = 2.6e-150
Identities = 278/418 (66%), Positives = 352/418 (84%)
Query: 1 MTTVVPTSEEDPALAVVRFTSELAWADAGPEAAEEQVNRLCLEAQESMVMGRWMDLASLM 60
MTT+VPTSEE+P LAVVRFTS+LAWADAGPEAAE ++ RLC EA+ESMV +W++L+SLM
Sbjct: 1 MTTIVPTSEENPFLAVVRFTSQLAWADAGPEAAEPEITRLCREAEESMVAEKWLELSSLM 60
Query: 61 LTSADLMFSKVSDKDLECIFTVICNLVTKPESLDEVHEMTKLISGKIIQQPNDKPAMRLK 120
+TSA+L+ SK+S+KDLEC +T+IC++V +S ++V EM K I+ K+ QQP+DK ++RLK
Sbjct: 61 VTSAELVSSKISEKDLECTYTIICSIVKNAKSPEQVLEMVKAIASKVAQQPSDKASLRLK 120
Query: 121 ILFNLYNLLENPYSRFFVYMKALNLAVNGKVTEHIIPSFKKIDSFLKEWNIDIKDKRALF 180
ILFNLYNL+++PY+RF VYMKAL LAV+GKVTE+I+ SFKKID+FLKEWNIDIKD+R LF
Sbjct: 121 ILFNLYNLVDHPYARFQVYMKALTLAVDGKVTEYIVSSFKKIDNFLKEWNIDIKDQRELF 180
Query: 181 LGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKEEAVRTIIEFVKSPDMFQCD 240
L IANVLKE++S +S KFLTKYLATFS EDA +DEAKEEAVR +IEFVK+ +FQCD
Sbjct: 181 LAIANVLKENKSLVNESLKFLTKYLATFSNEDAQVLDEAKEEAVRAVIEFVKASSIFQCD 240
Query: 241 LLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAGNSALLKSYGLVHEDCIAKMR 300
LLD+PA+ QLE DAKYA VYQLLKIFLTQRL+ Y EFQ NS L+SYGL +EDC+ KMR
Sbjct: 241 LLDLPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLQSYGLSNEDCVTKMR 300
Query: 301 LMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKARTAKLMDCKMDQMNQVVIVRRC 360
L+SLVDL S+ESG+IPY IKDTLQ+N +VE W+VKA TAKL++CKMDQMNQV+IV R
Sbjct: 301 LLSLVDLASDESGKIPYTSIKDTLQVNEQDVELWIVKAITAKLIECKMDQMNQVLIVSRS 360
Query: 361 TERVFGQHQWQTLRTKLSTWRANVANVISTIQATNKITEDGSHSQ-----AVQGLIIR 413
+ER FG QWQ+LRTKL+TW+ N++++I+TI++ NK+TE+GS + A+QGL +R
Sbjct: 361 SEREFGTKQWQSLRTKLATWKDNISSIITTIES-NKVTEEGSQASSSSAAAIQGLSVR 417
>DICTYBASE|DDB_G0287005 [details] [associations]
symbol:DDB_G0287005 "proteasome component region PCI
(PINT) domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0287005 GO:GO:0005737
GenomeReviews:CM000153_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003743 EMBL:AAFI02000095 eggNOG:NOG253821 KO:K15030
HAMAP:MF_03012 RefSeq:XP_637434.1 STRING:Q54KZ8
EnsemblProtists:DDB0238518 GeneID:8625903 KEGG:ddi:DDB_G0287005
OMA:IQANKVT Uniprot:Q54KZ8
Length = 401
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 129/344 (37%), Positives = 209/344 (60%)
Query: 56 LASLMLTSADLMFS--KVSDKDLECIFTVICNLVTKPESLDEVHEMTKLISGKIIQQPND 113
L+ ++ + +F K SDKD+E F VI ++ K E+ DE++ +++ I + P +
Sbjct: 50 LSKIVSNETEFLFKECKDSDKDIEGFFNVILTILHKLENEDEINIVSQKIRDSLSAHPTE 109
Query: 114 KPAMRLKILFNLYNLLENPYS--RFFVYMKALNLAVNGKVTEHIIPSFKKIDSFLKEWNI 171
+++KIL NL+N + P S R+ ++ + LA + E + IDS+L++WN+
Sbjct: 110 NSQLKIKILTNLFNSFQ-PKSTQRYDIFFALVKLASDSNNLEFVKYQITDIDSWLEDWNV 168
Query: 172 DIKDKRALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKEEAVRTIIEFV 231
I+ KR L+ I+N+ KE + S +FL KYL TF+ ED+ EA+E+AVR IE +
Sbjct: 169 SIQQKRKLYKLISNIFKEKQRML--SHQFLVKYLQTFTKEDSQ---EAQEDAVRVCIESI 223
Query: 232 KSPDMFQCD-LLDMPAIGQLENDAKYAS--VYQLLKIFLTQRLDGYLEFQAGNSALLKSY 288
+++Q D LLD+PA+ LE A+ Y+L+KIF T++LD +L+FQ N L +
Sbjct: 224 SLQELYQSDYLLDLPAVQYLEGSTVSANSLTYELMKIFATEQLDSFLQFQQKNPNFLSTI 283
Query: 289 GLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKARTAKLMDCKM 348
GL ++DC+ K+RL+SL L S +S ++PY LI LQI+ +EVE WV+ A L+D K+
Sbjct: 284 GLSNDDCLQKIRLLSLATLTSEQS-KVPYSLISKMLQIDENEVEMWVINAMEGDLLDAKL 342
Query: 349 DQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQ 392
DQ+N++V V T+RVF + QW L + S W+++V N++ I+
Sbjct: 343 DQLNRIVNVNSSTQRVFNKSQWSQLGQRFSVWKSSVKNLLQVIE 386
>UNIPROTKB|F1SGR0 [details] [associations]
symbol:EIF3M "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005852 "eukaryotic translation initiation factor 3
complex" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005852
CTD:10480 KO:K15030 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:CU856194 RefSeq:XP_003122934.1 UniGene:Ssc.3401
Ensembl:ENSSSCT00000014541 GeneID:100513781 KEGG:ssc:100513781
Uniprot:F1SGR0
Length = 374
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 96/351 (27%), Positives = 194/351 (55%)
Query: 44 AQESMVMGRWMDLASLMLTSADLMFSKVSDKDLECIFTVICNLVTKPESLDEVHEMTKLI 103
++E+ G +DLA + + + D+ K DKD+E + + +L+ E D+ + + +
Sbjct: 30 SEENSEGGLHVDLAQI-IEACDVCL-KEDDKDVESVMNSVVSLLLILEP-DKQEALIESL 86
Query: 104 SGKIIQ-QPNDKPAMRLKILFNLYNLLE-NPYSRFFVYMKALNLAVNGKVTEHIIPSFKK 161
K+++ + ++P++RL++L NL++ ++ N R+ VY + +A + ++I +
Sbjct: 87 CEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQ 146
Query: 162 IDSFLKEWNIDIKDKRALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKE 221
+ ++ +WN++ + K L + L + + S S K + + L +++ ++A +A+
Sbjct: 147 VRKWISDWNLNTEKKHTLLRLLYEALVDCKKSDAAS-KVMVELLGSYTEDNA---SQARV 202
Query: 222 EAVRTIIEFVKSPDMFQCD-LLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAG 280
+A R I+ +K P+ F D LL + + LE + ++ LL IF++ +L Y++F
Sbjct: 203 DAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGEL----IHDLLTIFVSAKLASYVKFYQN 258
Query: 281 NSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKART 340
N + S GL+HE +AKMRL++ + + E+ +I + ++ LQI D+VE +V+ A
Sbjct: 259 NKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVR 317
Query: 341 AKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTI 391
K++ CK+DQ + V+V T R FG+ QWQ L L+ W+ N+ V +++
Sbjct: 318 TKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 368
>UNIPROTKB|F1NZE2 [details] [associations]
symbol:EIF3M "Eukaryotic translation initiation factor 3
subunit M" species:9031 "Gallus gallus" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0005852 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:AADN02040176 IPI:IPI00822513 Ensembl:ENSGALT00000040077
ArrayExpress:F1NZE2 Uniprot:F1NZE2
Length = 375
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 98/351 (27%), Positives = 194/351 (55%)
Query: 44 AQESMVMGRWMDLASLMLTSADLMFSKVSDKDLECIFTVICNLVTKPESLDEVHEMTKLI 103
++E+ G +DLA + + D+ K DKD+E + + +L+ E D+ + + +
Sbjct: 31 SEENSEGGLHVDLAQI-IEVCDVCL-KEDDKDVESVMNSVVSLLLILEP-DKQEALIESL 87
Query: 104 SGKIIQ-QPNDKPAMRLKILFNLYNLLE-NPYSRFFVYMKALNLAVNGKVTEHIIPSFKK 161
K+++ + ++P++RL++L NL++ ++ N R+ VY L +A + ++I +
Sbjct: 88 CEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLLKVASSCGAIQYIPTELDQ 147
Query: 162 IDSFLKEWNIDIKDKRALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKE 221
+ ++ +WN+ K L + +VL + + S + K + + L +++ ++A +A+
Sbjct: 148 VRKWISDWNLSTDKKHTLLRLLYDVLVDCKKSDTAA-KVMVELLGSYTEDNA---SQARV 203
Query: 222 EAVRTIIEFVKSPDMFQCD-LLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAG 280
+A R I+ +K P+ F D LL + + LE + ++ LL IF++ +L Y++F
Sbjct: 204 DAHRCIVRALKDPNTFLFDHLLALKPVKFLEGEL----IHDLLTIFVSAKLVSYVKFYQN 259
Query: 281 NSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKART 340
N + S GL+HE +AKMRL++ + + E+ +I + ++ LQI D+VE +V+ A
Sbjct: 260 NKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVK 318
Query: 341 AKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTI 391
K++ CK+DQ + V+V T R FG+ QWQ L L+TW+ N+ V +++
Sbjct: 319 TKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNTWKQNLNQVKNSL 369
>UNIPROTKB|Q5ZJ64 [details] [associations]
symbol:EIF3M "Eukaryotic translation initiation factor 3
subunit M" species:9031 "Gallus gallus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003743 GO:GO:0005852 CTD:10480
eggNOG:NOG253821 HOGENOM:HOG000112351 HOVERGEN:HBG107844 KO:K15030
OrthoDB:EOG4FFD21 HAMAP:MF_03012 GeneTree:ENSGT00390000004456
OMA:PNTFLLD EMBL:AJ720570 IPI:IPI00587349 RefSeq:NP_001006406.1
UniGene:Gga.2429 STRING:Q5ZJ64 PRIDE:Q5ZJ64
Ensembl:ENSGALT00000019782 GeneID:421602 KEGG:gga:421602
InParanoid:Q5ZJ64 NextBio:20824344 ArrayExpress:Q5ZJ64
Uniprot:Q5ZJ64
Length = 374
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 98/351 (27%), Positives = 194/351 (55%)
Query: 44 AQESMVMGRWMDLASLMLTSADLMFSKVSDKDLECIFTVICNLVTKPESLDEVHEMTKLI 103
++E+ G +DLA + + D+ K DKD+E + + +L+ E D+ + + +
Sbjct: 30 SEENSEGGLHVDLAQI-IEVCDVCL-KEDDKDVESVMNSVVSLLLILEP-DKQEALIESL 86
Query: 104 SGKIIQ-QPNDKPAMRLKILFNLYNLLE-NPYSRFFVYMKALNLAVNGKVTEHIIPSFKK 161
K+++ + ++P++RL++L NL++ ++ N R+ VY L +A + ++I +
Sbjct: 87 CEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLLKVASSCGAIQYIPTELDQ 146
Query: 162 IDSFLKEWNIDIKDKRALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKE 221
+ ++ +WN+ K L + +VL + + S + K + + L +++ ++A +A+
Sbjct: 147 VRKWISDWNLSTDKKHTLLRLLYDVLVDCKKSDTAA-KVMVELLGSYTEDNA---SQARV 202
Query: 222 EAVRTIIEFVKSPDMFQCD-LLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAG 280
+A R I+ +K P+ F D LL + + LE + ++ LL IF++ +L Y++F
Sbjct: 203 DAHRCIVRALKDPNTFLFDHLLALKPVKFLEGEL----IHDLLTIFVSAKLVSYVKFYQN 258
Query: 281 NSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKART 340
N + S GL+HE +AKMRL++ + + E+ +I + ++ LQI D+VE +V+ A
Sbjct: 259 NKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVK 317
Query: 341 AKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTI 391
K++ CK+DQ + V+V T R FG+ QWQ L L+TW+ N+ V +++
Sbjct: 318 TKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNTWKQNLNQVKNSL 368
>UNIPROTKB|E2QWG8 [details] [associations]
symbol:EIF3M "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005852 "eukaryotic translation initiation
factor 3 complex" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005852
CTD:10480 KO:K15030 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:AAEX03011403 RefSeq:XP_533160.1 ProteinModelPortal:E2QWG8
SMR:E2QWG8 PRIDE:E2QWG8 Ensembl:ENSCAFT00000011822 GeneID:475950
KEGG:cfa:475950 NextBio:20851694 Uniprot:E2QWG8
Length = 374
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 96/351 (27%), Positives = 193/351 (54%)
Query: 44 AQESMVMGRWMDLASLMLTSADLMFSKVSDKDLECIFTVICNLVTKPESLDEVHEMTKLI 103
++E+ G +DLA + + + D+ K DKD+E + + +L+ E D+ + + +
Sbjct: 30 SEENSEGGLHVDLAQI-IEACDVCL-KEDDKDVESVMNSVVSLLLILEP-DKQEALIESL 86
Query: 104 SGKIIQ-QPNDKPAMRLKILFNLYNLLE-NPYSRFFVYMKALNLAVNGKVTEHIIPSFKK 161
K+++ + ++P++RL++L NL++ ++ N R+ VY + +A + ++I +
Sbjct: 87 CEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQ 146
Query: 162 IDSFLKEWNIDIKDKRALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKE 221
+ ++ +WN+ + K L + L + + S S K + + L +++ ++A +A+
Sbjct: 147 VRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAAS-KVMVELLGSYTEDNA---SQARV 202
Query: 222 EAVRTIIEFVKSPDMFQCD-LLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAG 280
+A R I+ +K P+ F D LL + + LE + ++ LL IF++ +L Y++F
Sbjct: 203 DAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGEL----IHDLLTIFVSAKLASYVKFYQN 258
Query: 281 NSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKART 340
N + S GL+HE +AKMRL++ + + E+ +I + ++ LQI D+VE +V+ A
Sbjct: 259 NKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVR 317
Query: 341 AKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTI 391
K++ CK+DQ + V+V T R FG+ QWQ L L+ W+ N+ V +++
Sbjct: 318 TKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 368
>UNIPROTKB|Q7L2H7 [details] [associations]
symbol:EIF3M "Eukaryotic translation initiation factor 3
subunit M" species:9606 "Homo sapiens" [GO:0003743 "translation
initiation factor activity" evidence=IC] [GO:0006413 "translational
initiation" evidence=IC] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 EMBL:CH471064 GO:GO:0006413 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003743 GO:GO:0005852 CTD:10480
eggNOG:NOG253821 HOGENOM:HOG000112351 HOVERGEN:HBG107844 KO:K15030
OrthoDB:EOG4FFD21 HAMAP:MF_03012 OMA:PNTFLLD EMBL:AY769947
EMBL:AF064603 EMBL:CR450300 EMBL:AK222564 EMBL:AK292139
EMBL:AK312512 EMBL:BC019103 EMBL:BC051292 EMBL:DQ185042
EMBL:AF277183 IPI:IPI00102069 RefSeq:NP_006351.2 UniGene:Hs.502244
ProteinModelPortal:Q7L2H7 SMR:Q7L2H7 DIP:DIP-31256N IntAct:Q7L2H7
MINT:MINT-4915331 STRING:Q7L2H7 PhosphoSite:Q7L2H7 DMDM:74754296
PaxDb:Q7L2H7 PeptideAtlas:Q7L2H7 PRIDE:Q7L2H7 DNASU:10480
Ensembl:ENST00000531120 GeneID:10480 KEGG:hsa:10480 UCSC:uc001mtu.3
GeneCards:GC11P032564 HGNC:HGNC:24460 HPA:HPA031063 MIM:609641
neXtProt:NX_Q7L2H7 PharmGKB:PA162384944 InParanoid:Q7L2H7
PhylomeDB:Q7L2H7 ChiTaRS:EIF3M GenomeRNAi:10480 NextBio:39758
ArrayExpress:Q7L2H7 Bgee:Q7L2H7 CleanEx:HS_EIF3M
Genevestigator:Q7L2H7 Uniprot:Q7L2H7
Length = 374
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 96/351 (27%), Positives = 193/351 (54%)
Query: 44 AQESMVMGRWMDLASLMLTSADLMFSKVSDKDLECIFTVICNLVTKPESLDEVHEMTKLI 103
++E+ G +DLA + + + D+ K DKD+E + + +L+ E D+ + + +
Sbjct: 30 SEENSEGGLHVDLAQI-IEACDVCL-KEDDKDVESVMNSVVSLLLILEP-DKQEALIESL 86
Query: 104 SGKIIQ-QPNDKPAMRLKILFNLYNLLE-NPYSRFFVYMKALNLAVNGKVTEHIIPSFKK 161
K+++ + ++P++RL++L NL++ ++ N R+ VY + +A + ++I +
Sbjct: 87 CEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQ 146
Query: 162 IDSFLKEWNIDIKDKRALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKE 221
+ ++ +WN+ + K L + L + + S S K + + L +++ ++A +A+
Sbjct: 147 VRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAAS-KVMVELLGSYTEDNA---SQARV 202
Query: 222 EAVRTIIEFVKSPDMFQCD-LLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAG 280
+A R I+ +K P+ F D LL + + LE + ++ LL IF++ +L Y++F
Sbjct: 203 DAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGEL----IHDLLTIFVSAKLASYVKFYQN 258
Query: 281 NSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKART 340
N + S GL+HE +AKMRL++ + + E+ +I + ++ LQI D+VE +V+ A
Sbjct: 259 NKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVR 317
Query: 341 AKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTI 391
K++ CK+DQ + V+V T R FG+ QWQ L L+ W+ N+ V +++
Sbjct: 318 TKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 368
>UNIPROTKB|F1N5F7 [details] [associations]
symbol:EIF3M "Eukaryotic translation initiation factor 3
subunit M" species:9913 "Bos taurus" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005852 IPI:IPI00717799 UniGene:Bt.5114
GeneTree:ENSGT00390000004456 OMA:PNTFLLD EMBL:DAAA02041245
Ensembl:ENSBTAT00000007021 Uniprot:F1N5F7
Length = 374
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 95/351 (27%), Positives = 192/351 (54%)
Query: 44 AQESMVMGRWMDLASLMLTSADLMFSKVSDKDLECIFTVICNLVTKPESLDEVHEMTKLI 103
++E+ G +DLA + + + D+ K DKD+E + + +L+ E D+ + + +
Sbjct: 30 SEENSEGGLHVDLAQI-IEACDVCL-KEDDKDVESVMNSVVSLLLILEP-DKQEALIESL 86
Query: 104 SGKIIQ-QPNDKPAMRLKILFNLYNLLE-NPYSRFFVYMKALNLAVNGKVTEHIIPSFKK 161
K+++ + ++P++RL++L NL++ ++ N R+ VY + +A + ++I +
Sbjct: 87 CEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQ 146
Query: 162 IDSFLKEWNIDIKDKRALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKE 221
+ ++ +WN+ + K L + L + + S S K + + L +++ ++A +A+
Sbjct: 147 VRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAAS-KVMVELLGSYTEDNA---SQARV 202
Query: 222 EAVRTIIEFVKSPDMFQCD-LLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAG 280
+A R I+ +K P+ F D LL + + LE + ++ LL IF++ +L Y++F
Sbjct: 203 DAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGEL----IHDLLTIFVSAKLASYVKFYQN 258
Query: 281 NSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKART 340
N + S GL+HE +AKMRL++ + + E+ +I + ++ L I D+VE +V+ A
Sbjct: 259 NKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELHIGADDVEAFVIDAVR 317
Query: 341 AKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTI 391
K++ CK+DQ + V+V T R FG+ QWQ L L+ W+ N+ V +++
Sbjct: 318 TKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 368
>MGI|MGI:1351744 [details] [associations]
symbol:Eif3m "eukaryotic translation initiation factor 3,
subunit M" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 MGI:MGI:1351744 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003743 EMBL:AL606494 GO:GO:0005852 CTD:10480
eggNOG:NOG253821 HOGENOM:HOG000112351 HOVERGEN:HBG107844 KO:K15030
OrthoDB:EOG4FFD21 HAMAP:MF_03012 GeneTree:ENSGT00390000004456
OMA:PNTFLLD EMBL:AK077480 EMBL:AK084738 EMBL:AK146222 EMBL:AK168066
EMBL:BC005598 EMBL:BC089568 EMBL:BC103795 EMBL:BC116787
EMBL:BC116789 IPI:IPI00115580 RefSeq:NP_663355.1 UniGene:Mm.379278
ProteinModelPortal:Q99JX4 SMR:Q99JX4 DIP:DIP-59784N STRING:Q99JX4
PhosphoSite:Q99JX4 PaxDb:Q99JX4 PRIDE:Q99JX4 DNASU:98221
Ensembl:ENSMUST00000028592 GeneID:98221 KEGG:mmu:98221
UCSC:uc008lkl.1 InParanoid:Q99JX4 NextBio:353368 Bgee:Q99JX4
Genevestigator:Q99JX4 Uniprot:Q99JX4
Length = 374
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 95/351 (27%), Positives = 192/351 (54%)
Query: 44 AQESMVMGRWMDLASLMLTSADLMFSKVSDKDLECIFTVICNLVTKPESLDEVHEMTKLI 103
++E+ G +DLA + + + D+ K DKD+E + + +L+ E D+ + + +
Sbjct: 30 SEENSEGGLHVDLAQI-IEACDVCL-KEDDKDVESVMNSVVSLLLILEP-DKQEALIESL 86
Query: 104 SGKIIQ-QPNDKPAMRLKILFNLYNLLE-NPYSRFFVYMKALNLAVNGKVTEHIIPSFKK 161
K+++ + ++P++RL++L NL++ ++ N R+ VY + +A + ++I +
Sbjct: 87 CEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQ 146
Query: 162 IDSFLKEWNIDIKDKRALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKE 221
+ ++ +W + + K L + L + + S S K + + L +++ ++A +A+
Sbjct: 147 VRKWISDWKLTTEKKHTLLRLLYEALVDCKKSDAAS-KVMVELLGSYTEDNA---SQARV 202
Query: 222 EAVRTIIEFVKSPDMFQCD-LLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAG 280
+A R I+ +K P+ F D LL + + LE + ++ LL IF++ +L Y++F
Sbjct: 203 DAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGEL----IHDLLTIFVSAKLASYVKFYQN 258
Query: 281 NSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKART 340
N + S GL+HE +AKMRL++ + + E+ +I + ++ LQI D+VE +V+ A
Sbjct: 259 NKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVR 317
Query: 341 AKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTI 391
K++ CK+DQ + V+V T R FG+ QWQ L L+ W+ N+ V +++
Sbjct: 318 TKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 368
>UNIPROTKB|Q3T148 [details] [associations]
symbol:EIF3M "Eukaryotic translation initiation factor 3
subunit M" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003743
EMBL:BC102130 IPI:IPI00717799 RefSeq:NP_001030389.2 UniGene:Bt.5114
STRING:Q3T148 PRIDE:Q3T148 GeneID:515543 KEGG:bta:515543 CTD:10480
eggNOG:NOG253821 HOGENOM:HOG000112351 HOVERGEN:HBG107844
InParanoid:Q3T148 KO:K15030 OrthoDB:EOG4FFD21 NextBio:20871877
HAMAP:MF_03012 Uniprot:Q3T148
Length = 373
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 96/351 (27%), Positives = 193/351 (54%)
Query: 44 AQESMVMGRWMDLASLMLTSADLMFSKVSDKDLECIFTVICNLVTKPESLDEVHEMTKLI 103
++E+ G +DLA + + + D+ K DKD+E + + +L+ E D+ + + +
Sbjct: 30 SEENSEGGLHVDLAQI-IEACDVCL-KEDDKDVESVMNSVVSLLLILEP-DKQEALIESL 86
Query: 104 SGKIIQ-QPNDKPAMRLKILFNLYNLLE-NPYSRFFVYMKALNLAVNGKVTEHIIPSFKK 161
K+++ + ++P++RL++L NL++ ++ N R+ VY + +A + ++I +
Sbjct: 87 CEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQ 146
Query: 162 IDSFLKEWNIDIKDKRALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKE 221
+ ++ +WN+ + K L + L + + S S K + + L +++ ++A +A+
Sbjct: 147 VRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAAS-KVMVELLGSYTEDNA---SQARV 202
Query: 222 EAVRTIIEFVKSPDMFQCD-LLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAG 280
+A R I+ +K P+ F D LL + + LE + ++ LL IF++ +L Y++F
Sbjct: 203 DAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGEL----IHDLLTIFVSAKL-AYVKFYQN 257
Query: 281 NSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKART 340
N + S GL+HE +AKMRL++ + + E+ +I + ++ LQI D+VE +V+ A
Sbjct: 258 NKDFIDSLGLLHEQNMAKMRLLTFMGMAV-ENKEISFDTMQQELQIGADDVEAFVIDAVR 316
Query: 341 AKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTI 391
K++ CK+DQ + V+V T R FG+ QWQ L L+ W+ N+ V +++
Sbjct: 317 TKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 367
>ZFIN|ZDB-GENE-040426-2643 [details] [associations]
symbol:eif3m "eukaryotic translation initiation
factor 3, subunit M" species:7955 "Danio rerio" [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-040426-2643 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003743 CTD:10480 eggNOG:NOG253821
HOGENOM:HOG000112351 HOVERGEN:HBG107844 KO:K15030 OrthoDB:EOG4FFD21
HAMAP:MF_03012 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:AY398350 EMBL:CR936403 EMBL:BC053188 IPI:IPI00491150
RefSeq:NP_001019906.1 UniGene:Dr.25567 STRING:Q7T3B0 PRIDE:Q7T3B0
Ensembl:ENSDART00000010256 GeneID:334626 KEGG:dre:334626
InParanoid:Q1L885 NextBio:20810484 Bgee:Q7T3B0 Uniprot:Q7T3B0
Length = 375
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 92/352 (26%), Positives = 191/352 (54%)
Query: 44 AQESMVMGRWMDLASLMLTSADLMFSKVSDKDLECIFTVICNLVTKPESLDEVHEMTKLI 103
++E+ G +DLA + + + D+ K DKD+E + I +L+ E+ ++ + + +
Sbjct: 30 SEENSEGGLHVDLAQI-IEACDVCL-KDDDKDVESVMNSIVSLLLILET-EKQEALIESL 86
Query: 104 SGKIIQ-QPNDKPAMRLKILFNLYNLL-ENPYSRFFVYMKALNLAVNGKVTEHIIPSFKK 161
K+++ + ++P++R+++L NL++ + EN R VY + +A + +
Sbjct: 87 CEKLVKFREGERPSLRMQLLSNLFHGMDENTPVRHTVYCSLIKVAATCNAITFMPTDLDQ 146
Query: 162 IDSFLKEWNIDIKDKRALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKE 221
+ ++ +WN++ + K L + L + + S + K + + L +++ ++A +A+
Sbjct: 147 VRKWIVDWNLNTEKKHTLLRLVYEALVDCKKSEAAA-KVMVELLGSYTEDNA---SQARV 202
Query: 222 EAVRTIIEFVKSPDMFQCD-LLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAG 280
+A R I+ +K P+ + D LL + + LE + ++ LL IF++ +L Y++F
Sbjct: 203 DAHRCIVRALKDPNTYLFDHLLALKPVRFLEGEL----IHDLLTIFVSAKLISYVKFYQS 258
Query: 281 NSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKART 340
N ++S GL HE ++KMRL++ + + E +I + ++ LQI ++VE +V+ A
Sbjct: 259 NKDFIESLGLSHEQNMSKMRLLTFMGMAV-EMKEISFETMQQELQIGAEDVEAFVIDAVR 317
Query: 341 AKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQ 392
K++ K+DQ + V+V T R FG+ QWQ L L +W+ N++ V S++Q
Sbjct: 318 TKMVYSKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLCSWKQNLSTVKSSLQ 369
>UNIPROTKB|A4RK68 [details] [associations]
symbol:MGG_01595 "Eukaryotic translation initiation factor
3 subunit M" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0003743 EMBL:CM001232 eggNOG:NOG253821
KO:K15030 HAMAP:MF_03012 OrthoDB:EOG441TM5 RefSeq:XP_003714574.1
STRING:A4RK68 EnsemblFungi:MGG_01595T0 GeneID:2679451
KEGG:mgr:MGG_01595 Uniprot:A4RK68
Length = 432
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 90/385 (23%), Positives = 194/385 (50%)
Query: 19 FTSELAWADAG-PEAAEEQVNRLCLEAQESMVMGRWMDLASLM-LTSADLMFSKVSDKDL 76
+ +L + D E A++ + L + + ++ + +L + S + + +K+
Sbjct: 5 YQPQLVFVDGSFAELAQDMASVLQISDEIQPLLDSEKESEALTKIVSESKKLNAIPEKEF 64
Query: 77 ECIFTVICNLVTKP-ESLDEVHEMTKLISGKIIQQPNDKPAMRLKILFNLYNLLE-NPYS 134
+ ++ +LV + E + + + ++ + P + L L +++NLL+ N
Sbjct: 65 TGAYNLLVHLVLQSKEPKKHLPTICQNLTRPVTSSPQHGAQLALFELTSIFNLLKPNDPV 124
Query: 135 RFFVYMKALNL-AVNG-KVTEHIIPSFKKIDSFLKEWNIDIKDKRALFLGIANVLKESRS 192
RF V+++ + ++ +++H+ + K++ +L+ W +D +D+R ++ + V+ +
Sbjct: 125 RFNVFIQIIRFYKIHSIPISDHLKSALKQLPRWLQSWELDEEDQRKMYSEVIEVMTAA-G 183
Query: 193 SSKDSFKFLTKYLATFSGEDA--HTMDEAKEEAVRTIIEFVKSPDMFQC-DLLDMPAIGQ 249
+++++ + K L TF EDA +T +EA++ A+R + + SP D+ +PA+
Sbjct: 184 EEEEAYQHILKALRTFDSEDAEDYTSEEAQQLALRALRSAISSPTRLSFEDIRALPAVHA 243
Query: 250 LENDAKYASVYQLLKIFLTQRLDGYLEFQAGNSALLKSYGLVHEDCIAKMRLMSLVDLG- 308
L + YQLL+IF Q LD Y +F+ + ++ L +E KMRL++ L
Sbjct: 244 LSES--HPVHYQLLQIFGEQDLDDYDDFREEHEGFIEKENLDNEVLYRKMRLLTFASLAA 301
Query: 309 -SNESGQIPYGLIKDTLQINNDEVEKWVVKARTAKLMDCKMDQMNQVVIVRRCTERVFGQ 367
S ++ +I Y I LQI +++VE W + A L++ K+ Q +V ++ RVFG+
Sbjct: 302 ASMQTREISYNSITKALQIPSEDVEMWAIDVIRAGLVEGKLSQKKKVFLIHSVRYRVFGE 361
Query: 368 HQWQTLRTKLSTWRANVANVISTIQ 392
QW+ L + L + V+ ++ T++
Sbjct: 362 KQWRQLASSLEKTKKTVSTLLQTLR 386
>ZFIN|ZDB-GENE-050913-52 [details] [associations]
symbol:zgc:114126 "zgc:114126" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-050913-52 HOVERGEN:HBG107844 EMBL:BC097184
IPI:IPI00610641 RefSeq:NP_001028904.1 UniGene:Dr.46267
GeneID:619250 KEGG:dre:619250 NextBio:20901469 Uniprot:Q4V8V4
Length = 370
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 93/359 (25%), Positives = 180/359 (50%)
Query: 55 DLASLMLTSADLMFSKVSDKDLECIFTVICNLVTKPESLDEVHEMTKLISGKIIQQPNDK 114
DL + + S F + + ++E I +L+ + ++ + K K+ ++ + K
Sbjct: 18 DLTHI-IESCHFCFQENKELEMEAALNSITSLLVCMD-MNRGESLVKKFCKKLTREQSKK 75
Query: 115 PAMR-LKILFNLYNLLENPYS-RFFVYMKALNLAVNGKVTEHIIPSFKKIDSFLKEW-NI 171
+ LK+L+ LY L+ + R+ VY + + LA G+ T I+ F + K + +
Sbjct: 76 LEISCLKVLYLLYQGLQTQSTPRYEVYCELIPLA--GR-TGQIMSVFTDTPTLKKSFPRL 132
Query: 172 DIKDKRALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKEEAVRTIIEFV 231
I + L+ I L + + S K + K + + L T++ E+A +AKE+A R I+ +
Sbjct: 133 TIDKLQHLYRLIHEALLKCKESEKAA-KVIMELLGTYTPENA---SQAKEDAQRCIVSAL 188
Query: 232 KSPDMFQCD-LLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAGNSALLKSYGL 290
P+ F D LL +P + LE A +++LL IF+T L YL F N + S GL
Sbjct: 189 ADPNTFLLDPLLALPPVKVLEG----APIHELLTIFVTDPLPTYLTFYNENKEFVDSLGL 244
Query: 291 VHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKARTAKLMDCKMDQ 350
HE+ + KMRL++ + + + ++ + ++D LQI+ +V ++++ KL+ +++
Sbjct: 245 SHEENVRKMRLLTFMQMAEAKE-ELTFDEVQDQLQISEKDVHQFIIDVLKTKLVKARVND 303
Query: 351 MNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQATNKITEDGSHSQAVQG 409
+ ++V R FG+ QW LR L +W ++ N+ + + A K+ D + ++G
Sbjct: 304 KQKKILVSATMHRTFGKMQWAHLRGTLGSWETHLKNLSNGLTAVVKLQADIMNKAGLEG 362
>POMBASE|SPAC1751.03 [details] [associations]
symbol:SPAC1751.03 "translation initiation factor eIF3m"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=IDA] [GO:0006413
"translational initiation" evidence=IMP] [GO:0016282 "eukaryotic
43S preinitiation complex" evidence=IDA] [GO:0071541 "eukaryotic
translation initiation factor 3 complex, eIF3m" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IC]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 PomBase:SPAC1751.03
GO:GO:0005829 GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003743 GO:GO:0002183 GO:GO:0016282 GO:GO:0071541 KO:K15030
HAMAP:MF_03012 OMA:IQANKVT OrthoDB:EOG441TM5 EMBL:AB016218
PIR:T43387 PIR:T50090 RefSeq:NP_592913.2 STRING:Q09722
EnsemblFungi:SPAC1751.03.1 GeneID:2542347 KEGG:spo:SPAC1751.03
NextBio:20803407 Uniprot:Q09722
Length = 402
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 103/378 (27%), Positives = 182/378 (48%)
Query: 22 ELAWADAGPEA-AEEQVNRLCLEAQESMVMGRWMDLASLMLTSADLMFSKVSDKDLECIF 80
ELA EA ++ V LC +E + ++ +L LT L+ ++ +K+LE I
Sbjct: 20 ELAMYLDNLEANTDKNVLALC---REYLASENVKEVLNLFLTRLPLL-AQAPEKELEPIL 75
Query: 81 TVICNLVTKPESL-DEVHEMTKLISGKIIQQPNDKPAMR--LKILFNLYNLLENPYSRFF 137
V NL+ + + D V + + + Q N PA+ L ILFN + E ++R
Sbjct: 76 AVFINLIQESAAFEDHVSKFCQALEQIADQNNNLTPAILSVLSILFNTA-VKERQHARLS 134
Query: 138 VYMKALNLAVNGKVTEHIIPSFKKIDSFLKEWNIDIKDKRALFLGIANVLKESRSSSKDS 197
+ + L + + P+ K +LKE + + D RA + ++ ++ + S
Sbjct: 135 ILTSVVTLTTRYSLFSTLAPNLKYFPDWLKEAGVSVSDHRAFNIFVSKAIQSY--DDEQS 192
Query: 198 FKFLTKYLATFSGEDAHTMDEAKEEAVRTIIEFVKSPDMFQCD-LLDMPAIGQLENDAKY 256
F FL + + D T DEA E V+ V SP F D ++ +P + QLE
Sbjct: 193 FAFLLEAVKM----DNSTADEAVRELVQRA---VNSPKYFFFDDIVTLPPVQQLEQ---- 241
Query: 257 ASVYQLLKIFLTQRLDGYLEFQAGNSALLKSYGLVHEDCIA-KMRLMSLVDLGSNE-SGQ 314
S QLL I D Y+ + A N A + + ED IA KM+L+++ L + +
Sbjct: 242 -STLQLLGILSGGMTDDYVSWVAENHAHCQ-HQKFDEDAIARKMKLLTIASLATQAPNNT 299
Query: 315 IPYGLIKDTLQINNDEVEKWVVKARTAKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLR 374
+ YG + +L+I+ +EVE W++ A L++ +M Q+ + + + R + RVFG+H+W L
Sbjct: 300 LSYGDVAKSLKIDENEVELWIIDVIRAGLVEGRMSQLTKTLSIHRSSYRVFGKHEWVALH 359
Query: 375 TKLSTWRANVANVISTIQ 392
KL+ W +++ ++ ++
Sbjct: 360 EKLAKWGSSLRYMLQVME 377
>FB|FBgn0033902 [details] [associations]
symbol:Tango7 "Transport and Golgi organization 7"
species:7227 "Drosophila melanogaster" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0007030 "Golgi organization" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0048812 "neuron projection morphogenesis"
evidence=IMP] InterPro:IPR000717 InterPro:IPR003607 Pfam:PF01399
SMART:SM00088 SMART:SM00471 EMBL:AE013599 GO:GO:0005829
GO:GO:0005794 GO:GO:0005875 GO:GO:0003824 GO:GO:0009306
GO:GO:0003743 GO:GO:0007030 eggNOG:NOG253821 KO:K15030
HAMAP:MF_03012 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:AY118924 RefSeq:NP_610932.1 UniGene:Dm.3068
ProteinModelPortal:Q7JVI3 SMR:Q7JVI3 IntAct:Q7JVI3 STRING:Q7JVI3
PaxDb:Q7JVI3 PRIDE:Q7JVI3 EnsemblMetazoa:FBtr0087579 GeneID:36565
KEGG:dme:Dmel_CG8309 CTD:36565 FlyBase:FBgn0033902
InParanoid:Q7JVI3 OrthoDB:EOG4TTF0C PhylomeDB:Q7JVI3
GenomeRNAi:36565 NextBio:799232 Bgee:Q7JVI3 Uniprot:Q7JVI3
Length = 387
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 93/349 (26%), Positives = 173/349 (49%)
Query: 65 DLMFSKVSDKDLECIF-TVICNLVTKPESLDEVHEMTKLISGKIIQQPNDKPAMR--LKI 121
D+ F ++ I +++ ++T P LD + K+ + PN P + L+
Sbjct: 51 DVCFKDGEPSQIDGILNSIVSIMITIP--LDRGENIVLAYCEKMTKAPN-LPLGKVCLQS 107
Query: 122 LFNLYNLLENPYS-RFFVYMKALNLAVNGKVTEHIIPSFKKIDSFLKEW-NI--DIKDKR 177
L+ L+N L+ R+ VY + +A K E ++ F +D ++ N + +
Sbjct: 108 LWRLFNNLDTASPLRYHVYYHLVQVA---KQCEQVLEVFSGVDQLKSQFANCPPSSEQMQ 164
Query: 178 ALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKEEAVRTIIEFVKSPDMF 237
L+ + +V K++ S K + + L T++ ++A A+E+A++ I+ + P+ F
Sbjct: 165 KLYRLLHDVTKDTNLEL--SSKVMIELLGTYTADNACV---AREDAMKCIVTALADPNTF 219
Query: 238 QCD-LLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAGNSALLKSYGLVHEDCI 296
D LL + + LE D ++ LL IF++++L Y++F + + S GL HE +
Sbjct: 220 LLDPLLSLKPVRFLEGDL----IHDLLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNM 275
Query: 297 AKMRLMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKARTAKLMDCKMDQMNQVVI 356
KMRL++ + L + S ++ + + LQIN DEVE +V++ KL+ ++DQ NQ V
Sbjct: 276 KKMRLLTFMQLAES-SPEMTFETLTKELQINEDEVEPFVIEVLKTKLVRARLDQANQKVH 334
Query: 357 VRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQATNKITEDGSHSQ 405
+ R FG QW+ LR L W+ N++ V + + + D + SQ
Sbjct: 335 ISSTMHRTFGAPQWEQLRDLLQAWKENLSTVREGLTSVSSAQLDLARSQ 383
>UNIPROTKB|Q292F0 [details] [associations]
symbol:Tango7 "Eukaryotic translation initiation factor 3
subunit M" species:46245 "Drosophila pseudoobscura pseudoobscura"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005794 "Golgi
apparatus" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] InterPro:IPR000717 InterPro:IPR003607 Pfam:PF01399
SMART:SM00088 SMART:SM00471 GO:GO:0005794 GO:GO:0003824
GO:GO:0009306 GO:GO:0003743 EMBL:CM000071 GenomeReviews:CM000071_GR
eggNOG:NOG253821 KO:K15030 HAMAP:MF_03012 OMA:PNTFLLD
OrthoDB:EOG4TTF0C RefSeq:XP_001360337.1 GeneID:4803654
KEGG:dpo:Dpse_GA20974 FlyBase:FBgn0080963 InParanoid:Q292F0
Uniprot:Q292F0
Length = 387
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 87/331 (26%), Positives = 165/331 (49%)
Query: 65 DLMFSKVSDKDLECIF-TVICNLVTKPESLDEVHEMTKLISGKIIQQPNDKPAMR--LKI 121
D+ F ++ I +++ ++T P LD + K+ + PN +P + L+
Sbjct: 51 DVCFKDGEPSQIDGILNSIVSIMITIP--LDRGENIVLAYCEKMTKAPN-QPLGKVCLQS 107
Query: 122 LFNLYNLLENPYS-RFFVYMKALNLAVNGKVTEHIIPSFKKIDSFLKEW-NI--DIKDKR 177
L+ L+N L+ R+ VY + +A K E ++ F +D ++ N + +
Sbjct: 108 LWRLFNNLDTASPLRYHVYYHLVQVA---KQCEQVLEVFTGVDQLKTQFANCPPSSEQMQ 164
Query: 178 ALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKEEAVRTIIEFVKSPDMF 237
L+ + +V K++ S K + + L T++ ++A A+E+A++ I+ + P+ F
Sbjct: 165 KLYRLLHDVTKDTNMEL--SSKVMIELLGTYTADNACV---AREDAMKCIVTALADPNTF 219
Query: 238 QCD-LLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAGNSALLKSYGLVHEDCI 296
D LL + + LE D ++ LL IF++ +L Y++F + + S GL HE +
Sbjct: 220 LLDPLLALKPVRFLEGDL----IHDLLSIFVSDKLPSYVQFYEDHKEFVNSQGLNHEQNM 275
Query: 297 AKMRLMSLVDLGSNESGQIPYGLIKDTLQINNDEVEKWVVKARTAKLMDCKMDQMNQVVI 356
KMRL++ + L + ++ + + LQI DEVE +V++ KL+ ++DQ N+ V
Sbjct: 276 KKMRLLTFMQLAESNP-EMTFDTLTKELQITEDEVEPFVIQVLKTKLVRARLDQANRKVH 334
Query: 357 VRRCTERVFGQHQWQTLRTKLSTWRANVANV 387
+ R FG QW+ LR L W+ N+++V
Sbjct: 335 ISSTMHRTFGAPQWEQLRDLLQAWKENLSSV 365
>ASPGD|ASPL0000017804 [details] [associations]
symbol:AN4259 species:162425 "Emericella nidulans"
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006413
"translational initiation" evidence=IEA] [GO:0016282 "eukaryotic
43S preinitiation complex" evidence=IEA] [GO:0071541 "eukaryotic
translation initiation factor 3 complex, eIF3m" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 EMBL:BN001302 GO:GO:0003743 eggNOG:NOG253821
KO:K15030 HAMAP:MF_03012 OMA:IQANKVT EMBL:AACD01000069
RefSeq:XP_661863.1 EnsemblFungi:CADANIAT00004396 GeneID:2873678
KEGG:ani:AN4259.2 HOGENOM:HOG000234940 OrthoDB:EOG441TM5
Uniprot:Q5B5C1
Length = 459
Score = 251 (93.4 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 83/351 (23%), Positives = 163/351 (46%)
Query: 61 LTSADLMFSKVSDKDLECIFTVICNLVTKPESLDE-VHEMTKLISGKIIQQPNDKPAMRL 119
L SA + + +K++ + ++ +LV + D + + ++ I P ++ +
Sbjct: 69 LVSAATVLNTAPEKEITPAYNLLIHLVQQASDPDMFLSRICSYLAKPIPSSPQFGASLSI 128
Query: 120 KILFNLYNLLE-NPYSRFFVYMKALNL---AVNGKVTEHIIPSFK-KIDSFLKEWNIDIK 174
IL ++N L SRF V + + + + + + + P ++ ++ W +D +
Sbjct: 129 AILSTIFNTLAPTDSSRFHVLLAIVTVIRQSGSSAAFDALKPQLTAQLPNWRSTWELDDE 188
Query: 175 DKRALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKEEAVRTIIEFVKSP 234
+ R L L IA+ ++ + + L T +A + A++ AVR + + P
Sbjct: 189 EARRLHLAIADAA-QAAGDLDWAQTHVVDALQTIPPAEASS-PAARDLAVRALTSALTHP 246
Query: 235 DMFQ-CDLLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAGNSA--LLKSYGLV 291
+F L A+ L + A +++LL+IF LD Y +F + +L L
Sbjct: 247 AVFDFTPLTAADAVQALRSSD--APLFELLEIFTADTLDAYEDFISATPVENILPDNALA 304
Query: 292 -HEDCI-AKMRLMSLVDLGS---NESG----QIPYGLIKDTLQINNDEVEKWVVKARTAK 342
H + + K+RL++L L + +G + Y I L++ +EVEKWV+ A
Sbjct: 305 PHAEALQTKIRLLTLASLAAAATTTTGPSARSLSYETIASALRVPQEEVEKWVIDTIRAG 364
Query: 343 LMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQA 393
L++ K+ Q+ +V R T RVFG+ QW ++ +L WR ++ NV+ I++
Sbjct: 365 LVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLENVLGVIRS 415
>RGD|1565840 [details] [associations]
symbol:Eif3m "eukaryotic translation initiation factor 3,
subunit M" species:10116 "Rattus norvegicus" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISO]
RGD:1565840 IPI:IPI00952457 Ensembl:ENSRNOT00000064134
UCSC:RGD:1565840 ArrayExpress:D4A654 Uniprot:D4A654
Length = 214
Score = 129 (50.5 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 36/159 (22%), Positives = 77/159 (48%)
Query: 130 ENPYSRFFVYMKALNLAVNGKVTEHIIPSFKKIDSFLKEWNIDIKDKRALFLGIANVLKE 189
+N R+ VY + +A + ++I ++ ++ +W + + K L + L +
Sbjct: 3 KNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWKLTTEKKHTLLRLLYEALVD 62
Query: 190 SRSSSKDSFKFLTKYLATFSGEDAHTMDEAKEEAVRTIIEFVKSPDMFQCD-LLDMPAIG 248
+ S S K + + L +++ ++A +A+ +A R I+ +K P+ F D LL + +
Sbjct: 63 CKKSDAAS-KVMVELLGSYTEDNA---SQARVDAHRCIVRALKDPNAFLFDHLLTLKPVK 118
Query: 249 QLENDAKYASVYQLLKIFLTQRLDGYLEFQAGNSALLKS 287
LE + ++ LL IF++ +L Y++F N + S
Sbjct: 119 FLEGEL----IHDLLTIFVSAKLASYVKFYQNNKDFIDS 153
Score = 116 (45.9 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 325 QINNDEVEKWVVKARTAKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANV 384
Q N D ++ V RT K++ CK+DQ + V+V T R FG+ QWQ L L+ W+ N+
Sbjct: 145 QNNKDFIDSLAV--RT-KMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNL 201
Query: 385 ANVISTI 391
V +++
Sbjct: 202 NKVKNSL 208
>WB|WBGene00019543 [details] [associations]
symbol:cif-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0009792
GO:GO:0005737 GO:GO:0030154 GO:GO:0000003 GO:GO:0048477
GO:GO:0003743 GO:GO:0008180 eggNOG:NOG253821 KO:K15030
HAMAP:MF_03012 EMBL:FO081041 PIR:T30020 RefSeq:NP_500618.1
ProteinModelPortal:Q94261 SMR:Q94261 DIP:DIP-27147N IntAct:Q94261
MINT:MINT-1039802 STRING:Q94261 PaxDb:Q94261
EnsemblMetazoa:K08F11.3.1 EnsemblMetazoa:K08F11.3.2
EnsemblMetazoa:K08F11.3.3 EnsemblMetazoa:K08F11.3.4 GeneID:177236
KEGG:cel:CELE_K08F11.3 UCSC:K08F11.3.1 CTD:177236 WormBase:K08F11.3
GeneTree:ENSGT00390000004456 HOGENOM:HOG000112352 InParanoid:Q94261
OMA:PNTFLLD NextBio:895926 Uniprot:Q94261
Length = 390
Score = 191 (72.3 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 67/285 (23%), Positives = 128/285 (44%)
Query: 119 LKILFNLYNLLENPYSRFFVYMKAL-NLAVNGKVTEHIIPSFKKIDSFLKEWNIDIKDKR 177
+++L NLY N ++ KAL ++ ++ + + + + W ++ +R
Sbjct: 111 VRVLSNLYKGYSNFHTVQEKIFKALVDMCAEARLIGELECNLETLQDRFNTWKTPVEGQR 170
Query: 178 ALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKEEAVRTIIEFVKSPDMF 237
+ + L + + + K +T L T++ +DA + E VRT V P F
Sbjct: 171 EILRAVHRALLVDQRVDQAA-KVMTALLGTYTEKDAAAARDDAMECVRTA---VVDPKSF 226
Query: 238 QCDLLD-MPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAGNSALLKSYGLVHEDCI 296
D L+ + A+ L+ ++ L++F++ L Y EF A N + + V E +
Sbjct: 227 SFDHLERLSAVKALKTSDPL--MFTALELFISGTLKDYKEFVAKNPKFVTEHLKVDETIL 284
Query: 297 AK-MRLMSLVDLGSNESGQIPYGLIKDTLQINNDE-VEKWVVKARTAKLMDCKMDQMNQV 354
K +RL++L+ L + E +I + L I DE +E++V+ A + K+++M +
Sbjct: 285 LKKIRLLTLMSL-AEEKNEISLDELAKQLDILADETLEEFVIDAIQVNAISGKINEMART 343
Query: 355 VIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQATNKITE 399
+IV R FG QW L +L AN+ + + N+ E
Sbjct: 344 LIVSSYQHRRFGTEQWVLLEKRLKVLIANLKQTHNNVHEVNQRIE 388
>UNIPROTKB|Q94261 [details] [associations]
symbol:cif-1 "COP9/Signalosome and eIF3 complex-shared
subunit 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0009792 GO:GO:0005737 GO:GO:0030154
GO:GO:0000003 GO:GO:0048477 GO:GO:0003743 GO:GO:0008180
eggNOG:NOG253821 KO:K15030 HAMAP:MF_03012 EMBL:FO081041 PIR:T30020
RefSeq:NP_500618.1 ProteinModelPortal:Q94261 SMR:Q94261
DIP:DIP-27147N IntAct:Q94261 MINT:MINT-1039802 STRING:Q94261
PaxDb:Q94261 EnsemblMetazoa:K08F11.3.1 EnsemblMetazoa:K08F11.3.2
EnsemblMetazoa:K08F11.3.3 EnsemblMetazoa:K08F11.3.4 GeneID:177236
KEGG:cel:CELE_K08F11.3 UCSC:K08F11.3.1 CTD:177236 WormBase:K08F11.3
GeneTree:ENSGT00390000004456 HOGENOM:HOG000112352 InParanoid:Q94261
OMA:PNTFLLD NextBio:895926 Uniprot:Q94261
Length = 390
Score = 191 (72.3 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 67/285 (23%), Positives = 128/285 (44%)
Query: 119 LKILFNLYNLLENPYSRFFVYMKAL-NLAVNGKVTEHIIPSFKKIDSFLKEWNIDIKDKR 177
+++L NLY N ++ KAL ++ ++ + + + + W ++ +R
Sbjct: 111 VRVLSNLYKGYSNFHTVQEKIFKALVDMCAEARLIGELECNLETLQDRFNTWKTPVEGQR 170
Query: 178 ALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKEEAVRTIIEFVKSPDMF 237
+ + L + + + K +T L T++ +DA + E VRT V P F
Sbjct: 171 EILRAVHRALLVDQRVDQAA-KVMTALLGTYTEKDAAAARDDAMECVRTA---VVDPKSF 226
Query: 238 QCDLLD-MPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEFQAGNSALLKSYGLVHEDCI 296
D L+ + A+ L+ ++ L++F++ L Y EF A N + + V E +
Sbjct: 227 SFDHLERLSAVKALKTSDPL--MFTALELFISGTLKDYKEFVAKNPKFVTEHLKVDETIL 284
Query: 297 AK-MRLMSLVDLGSNESGQIPYGLIKDTLQINNDE-VEKWVVKARTAKLMDCKMDQMNQV 354
K +RL++L+ L + E +I + L I DE +E++V+ A + K+++M +
Sbjct: 285 LKKIRLLTLMSL-AEEKNEISLDELAKQLDILADETLEEFVIDAIQVNAISGKINEMART 343
Query: 355 VIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQATNKITE 399
+IV R FG QW L +L AN+ + + N+ E
Sbjct: 344 LIVSSYQHRRFGTEQWVLLEKRLKVLIANLKQTHNNVHEVNQRIE 388
>GENEDB_PFALCIPARUM|PF10_0298 [details] [associations]
symbol:PF10_0298 "26S proteasome subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0004175
GO:GO:0000502 GO:GO:0006511 EMBL:AE014185 KO:K03039 OMA:INQVEQV
RefSeq:XP_001347582.1 ProteinModelPortal:Q8IJA0 PRIDE:Q8IJA0
EnsemblProtists:PF10_0298:mRNA GeneID:810455 KEGG:pfa:PF10_0298
EuPathDB:PlasmoDB:PF3D7_1030500 HOGENOM:HOG000284566
ProtClustDB:CLSZ2434533 Uniprot:Q8IJA0
Length = 393
Score = 142 (55.0 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 45/204 (22%), Positives = 100/204 (49%)
Query: 199 KFLTKYLATFSGEDAHTMDEAKEEAVRTIIEFVKSPDMFQC-DLLDMPAIGQ-LENDAKY 256
K+ YLA D + D + I + S +++ +++ +P I ++N+ +
Sbjct: 185 KYALLYLAYTPLNDLNDYDRI-DIGTYICIHSIISENVYNIGEIIQLPLINVCIKNNEET 243
Query: 257 ASVYQLLKIFLTQRLDGYLE----FQAG-NSALLKSYGLVHEDCIAKMRLMSLVDLGSNE 311
+Y+L+ I+ +D + E +Q+ + +LK+Y + + KM L++L+DL +
Sbjct: 244 NWLYELIYIYNEGNIDSFNETIGKYQSNIENCILKNY---QHNMLKKMTLLALMDLAFKK 300
Query: 312 SGQ---IPYGLIKDTLQINNDEVEKWVVKARTAKLMDCKMDQMNQVVIVRRCTERVFGQH 368
Q I + I +I+ +EVEK ++ A++ ++ CK+D++ + V + RV
Sbjct: 301 KKQREDISFHEIAQHCKIDINEVEKMLITAKSKNIITCKIDEIQKTVKITWVKPRVLNNE 360
Query: 369 QWQTLRTKLSTWRANVANVISTIQ 392
+ ++ + W N N+I+ ++
Sbjct: 361 KIYFMKESIDKWINNSKNLITYME 384
>UNIPROTKB|Q8IJA0 [details] [associations]
symbol:PF10_0298 "26S proteasome subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0004175
GO:GO:0000502 GO:GO:0006511 EMBL:AE014185 KO:K03039 OMA:INQVEQV
RefSeq:XP_001347582.1 ProteinModelPortal:Q8IJA0 PRIDE:Q8IJA0
EnsemblProtists:PF10_0298:mRNA GeneID:810455 KEGG:pfa:PF10_0298
EuPathDB:PlasmoDB:PF3D7_1030500 HOGENOM:HOG000284566
ProtClustDB:CLSZ2434533 Uniprot:Q8IJA0
Length = 393
Score = 142 (55.0 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 45/204 (22%), Positives = 100/204 (49%)
Query: 199 KFLTKYLATFSGEDAHTMDEAKEEAVRTIIEFVKSPDMFQC-DLLDMPAIGQ-LENDAKY 256
K+ YLA D + D + I + S +++ +++ +P I ++N+ +
Sbjct: 185 KYALLYLAYTPLNDLNDYDRI-DIGTYICIHSIISENVYNIGEIIQLPLINVCIKNNEET 243
Query: 257 ASVYQLLKIFLTQRLDGYLE----FQAG-NSALLKSYGLVHEDCIAKMRLMSLVDLGSNE 311
+Y+L+ I+ +D + E +Q+ + +LK+Y + + KM L++L+DL +
Sbjct: 244 NWLYELIYIYNEGNIDSFNETIGKYQSNIENCILKNY---QHNMLKKMTLLALMDLAFKK 300
Query: 312 SGQ---IPYGLIKDTLQINNDEVEKWVVKARTAKLMDCKMDQMNQVVIVRRCTERVFGQH 368
Q I + I +I+ +EVEK ++ A++ ++ CK+D++ + V + RV
Sbjct: 301 KKQREDISFHEIAQHCKIDINEVEKMLITAKSKNIITCKIDEIQKTVKITWVKPRVLNNE 360
Query: 369 QWQTLRTKLSTWRANVANVISTIQ 392
+ ++ + W N N+I+ ++
Sbjct: 361 KIYFMKESIDKWINNSKNLITYME 384
>UNIPROTKB|F1NGK0 [details] [associations]
symbol:COPS7A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0008180 GO:GO:0010388 OMA:HNVRQLE
GeneTree:ENSGT00390000013069 EMBL:AADN02061125 IPI:IPI00598529
Ensembl:ENSGALT00000023360 Uniprot:F1NGK0
Length = 275
Score = 135 (52.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 50/190 (26%), Positives = 96/190 (50%)
Query: 219 AKEEAVRTII-EFVKSPDMFQC-DLLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLE 276
A+ A+ ++I + +++P ++ +LLDMPA+ +L D++++ V+ LL IF YL
Sbjct: 22 ARGAALASLIHQVLEAPGIYVFGELLDMPAVRELA-DSEFSPVFHLLTIFACGTYADYLA 80
Query: 277 FQAGNSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINN-DEVEKWV 335
+A N L ++ K+R +S+V L + IPY ++ + LQ+ N ++E V
Sbjct: 81 -EAANLPPLTE---AQKN---KLRHLSVVTLAAKIKC-IPYSVLLEQLQLKNVRQLEDLV 132
Query: 336 VKARTAKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQATN 395
++A A ++ +DQ NQ + V R + + T+ L W V+S I+
Sbjct: 133 IEAVYADVLRGSLDQRNQRLEVDYSIGRDIRREELSTITRTLQEWCQGCEVVLSGIE--E 190
Query: 396 KITEDGSHSQ 405
+++ H +
Sbjct: 191 QVSRANQHKE 200
>UNIPROTKB|F5GYF7 [details] [associations]
symbol:COPS7A "COP9 signalosome complex subunit 7a"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005634 GO:GO:0005737 HGNC:HGNC:16758 ChiTaRS:COPS7A
EMBL:AC125494 IPI:IPI01012686 ProteinModelPortal:F5GYF7 SMR:F5GYF7
Ensembl:ENST00000538753 ArrayExpress:F5GYF7 Bgee:F5GYF7
Uniprot:F5GYF7
Length = 213
Score = 126 (49.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 50/195 (25%), Positives = 94/195 (48%)
Query: 219 AKEEAVRTII-EFVKSPDMFQC-DLLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLE 276
AK A+ T+I + +++P ++ +LLDMP + +L ++ +AS ++LL +F YL
Sbjct: 22 AKGAALATLIHQVLEAPGVYVFGELLDMPNVRELA-ESDFASTFRLLTVFAYGTYADYLA 80
Query: 277 FQAGNSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINN-DEVEKWV 335
+A N L ++ K+R +S+V L + IPY ++ + L + N ++E V
Sbjct: 81 -EARNLPPLTE---AQKN---KLRHLSVVTLAAKVKC-IPYAVLLEALALRNVRQLEDLV 132
Query: 336 VKARTAKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQATN 395
++A A ++ +DQ NQ + V R + + L W V+S I+
Sbjct: 133 IEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIE--E 190
Query: 396 KITEDGSHSQAVQGL 410
+++ H + GL
Sbjct: 191 QVSRANQHKEQQLGL 205
>UNIPROTKB|F1MAA2 [details] [associations]
symbol:Cops7a "Protein Cops7a" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
RGD:1310070 GO:GO:0005737 GO:GO:0008180 GO:GO:0010388 CTD:50813
KO:K12180 OMA:HNVRQLE GeneTree:ENSGT00390000013069 IPI:IPI00365695
RefSeq:NP_001040563.2 UniGene:Rn.154627 PRIDE:F1MAA2
Ensembl:ENSRNOT00000022874 GeneID:312710 KEGG:rno:312710
NextBio:665200 Uniprot:F1MAA2
Length = 277
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 51/195 (26%), Positives = 94/195 (48%)
Query: 219 AKEEAVRTII-EFVKSPDMFQC-DLLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLE 276
AK A+ T+I + +++P ++ +LLDMP + +L D+ +AS ++LL +F YL
Sbjct: 22 AKGAALATLIHQVLEAPGVYVFGELLDMPNVRELA-DSDFASTFRLLTVFAYGTYADYLA 80
Query: 277 FQAGNSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINN-DEVEKWV 335
+A N L ++ K+R +S+V L + IPY ++ + L + N ++E V
Sbjct: 81 -EARNLPPLTE---AQKN---KLRHLSVVTLAAKVKC-IPYAVLLEALALRNVRQLEDLV 132
Query: 336 VKARTAKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQATN 395
++A A ++ +DQ NQ + V R + + L W V+S I+
Sbjct: 133 IEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIAQTLQEWCVGCEVVLSGIE--E 190
Query: 396 KITEDGSHSQAVQGL 410
+++ H + GL
Sbjct: 191 QVSRANLHKEQQLGL 205
>DICTYBASE|DDB_G0271282 [details] [associations]
symbol:csn7 "proteasome component region PCI (PINT)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0271282 GO:GO:0005737
GenomeReviews:CM000151_GR EMBL:AAFI02000006 GO:GO:0008180
eggNOG:NOG289374 KO:K12180 EMBL:DQ309435 RefSeq:XP_645677.1
STRING:Q55BD5 PRIDE:Q55BD5 EnsemblProtists:DDB0233106
GeneID:8617870 KEGG:ddi:DDB_G0271282 OMA:LEISESM
ProtClustDB:CLSZ2497283 Uniprot:Q55BD5
Length = 259
Score = 126 (49.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 47/191 (24%), Positives = 94/191 (49%)
Query: 219 AKEEAVRTIIE-FVKSPDMFQC-DLLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLE 276
+K A+ +IIE + P +F +LLDMP + QL+ + ++ + Y LL IF +++
Sbjct: 24 SKGRAIVSIIEKALNHPSVFVFGELLDMPNVQQLK-ETEFKNYYDLLLIFA---YGSFID 79
Query: 277 FQAGNSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINN-DEVEKWV 335
++ +L + + I K++ +++V L S S IPY ++++ ++I N E+E +
Sbjct: 80 YKNKKDSLPQ----LTPQMITKLKQLTIVFLSST-SNVIPYSVLQEQIEITNVRELEDLI 134
Query: 336 VKARTAKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQATN 395
+ + ++ K+DQ N+ + + R Q ++ L+ W + ++ I
Sbjct: 135 IDSIYQNIIKGKLDQKNKHLEIDFSIGRDVQPEQLDSMINCLNNWSSTSQKLLDDISGL- 193
Query: 396 KITE-DGSHSQ 405
IT D H Q
Sbjct: 194 -ITHSDKVHLQ 203
>UNIPROTKB|F5H248 [details] [associations]
symbol:COPS7A "COP9 signalosome complex subunit 7a"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005634 GO:GO:0005737 HGNC:HGNC:16758 ChiTaRS:COPS7A
EMBL:AC125494 IPI:IPI01015612 ProteinModelPortal:F5H248 SMR:F5H248
Ensembl:ENST00000538410 ArrayExpress:F5H248 Bgee:F5H248
Uniprot:F5H248
Length = 262
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 50/195 (25%), Positives = 94/195 (48%)
Query: 219 AKEEAVRTII-EFVKSPDMFQC-DLLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLE 276
AK A+ T+I + +++P ++ +LLDMP + +L ++ +AS ++LL +F YL
Sbjct: 22 AKGAALATLIHQVLEAPGVYVFGELLDMPNVRELA-ESDFASTFRLLTVFAYGTYADYLA 80
Query: 277 FQAGNSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINN-DEVEKWV 335
+A N L ++ K+R +S+V L + IPY ++ + L + N ++E V
Sbjct: 81 -EARNLPPLTE---AQKN---KLRHLSVVTLAAKVKC-IPYAVLLEALALRNVRQLEDLV 132
Query: 336 VKARTAKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQATN 395
++A A ++ +DQ NQ + V R + + L W V+S I+
Sbjct: 133 IEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIE--E 190
Query: 396 KITEDGSHSQAVQGL 410
+++ H + GL
Sbjct: 191 QVSRANQHKEQQLGL 205
>UNIPROTKB|E2RED3 [details] [associations]
symbol:COPS7A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0008180 GO:GO:0010388 CTD:50813 KO:K12180
OMA:HNVRQLE GeneTree:ENSGT00390000013069 EMBL:AAEX03015279
RefSeq:XP_003639987.1 RefSeq:XP_543849.2 Ensembl:ENSCAFT00000023365
GeneID:486722 KEGG:cfa:486722 NextBio:20860455 Uniprot:E2RED3
Length = 275
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 50/195 (25%), Positives = 94/195 (48%)
Query: 219 AKEEAVRTII-EFVKSPDMFQC-DLLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLE 276
AK A+ T+I + +++P ++ +LLDMP + +L ++ +AS ++LL +F YL
Sbjct: 22 AKGAALATLIHQVLEAPGVYVFGELLDMPNVRELA-ESDFASTFRLLTVFAYGTYADYLA 80
Query: 277 FQAGNSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINN-DEVEKWV 335
+A N L ++ K+R +S+V L + IPY ++ + L + N ++E V
Sbjct: 81 -EARNLPPLTE---AQKN---KLRHLSVVTLAAKVKC-IPYAVLLEALALRNVRQLEDLV 132
Query: 336 VKARTAKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQATN 395
++A A ++ +DQ NQ + V R + + L W V+S I+
Sbjct: 133 IEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAITRTLQEWCVGCEVVLSGIE--E 190
Query: 396 KITEDGSHSQAVQGL 410
+++ H + GL
Sbjct: 191 QVSRANQHKEQQLGL 205
>UNIPROTKB|Q9UBW8 [details] [associations]
symbol:COPS7A "COP9 signalosome complex subunit 7a"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IDA]
[GO:0010388 "cullin deneddylation" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 EMBL:CH471116
GO:GO:0008180 GO:GO:0010388 EMBL:AF210052 EMBL:AB014764
EMBL:AB033603 EMBL:AF193844 EMBL:AK001318 EMBL:AK021721
EMBL:AK022488 EMBL:AK292621 EMBL:BC011789 IPI:IPI00301419
RefSeq:NP_001157565.1 RefSeq:NP_001157566.1 RefSeq:NP_001157567.1
RefSeq:NP_057403.1 UniGene:Hs.530823 ProteinModelPortal:Q9UBW8
SMR:Q9UBW8 DIP:DIP-53412N IntAct:Q9UBW8 MINT:MINT-1393951
STRING:Q9UBW8 PhosphoSite:Q9UBW8 DMDM:55976618 PaxDb:Q9UBW8
PeptideAtlas:Q9UBW8 PRIDE:Q9UBW8 DNASU:50813
Ensembl:ENST00000229251 Ensembl:ENST00000442593
Ensembl:ENST00000534877 Ensembl:ENST00000534947
Ensembl:ENST00000539735 Ensembl:ENST00000543155 GeneID:50813
KEGG:hsa:50813 UCSC:uc001qqh.3 CTD:50813 GeneCards:GC12P006833
HGNC:HGNC:16758 HPA:HPA026915 neXtProt:NX_Q9UBW8 PharmGKB:PA26758
eggNOG:NOG289374 HOGENOM:HOG000006003 HOVERGEN:HBG051138
InParanoid:Q9UBW8 KO:K12180 OMA:HNVRQLE OrthoDB:EOG42Z4R2
PhylomeDB:Q9UBW8 ChiTaRS:COPS7A GenomeRNAi:50813 NextBio:53257
ArrayExpress:Q9UBW8 Bgee:Q9UBW8 CleanEx:HS_COPS7A
Genevestigator:Q9UBW8 GermOnline:ENSG00000111652 Uniprot:Q9UBW8
Length = 275
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 50/195 (25%), Positives = 94/195 (48%)
Query: 219 AKEEAVRTII-EFVKSPDMFQC-DLLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLE 276
AK A+ T+I + +++P ++ +LLDMP + +L ++ +AS ++LL +F YL
Sbjct: 22 AKGAALATLIHQVLEAPGVYVFGELLDMPNVRELA-ESDFASTFRLLTVFAYGTYADYLA 80
Query: 277 FQAGNSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINN-DEVEKWV 335
+A N L ++ K+R +S+V L + IPY ++ + L + N ++E V
Sbjct: 81 -EARNLPPLTE---AQKN---KLRHLSVVTLAAKVKC-IPYAVLLEALALRNVRQLEDLV 132
Query: 336 VKARTAKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQATN 395
++A A ++ +DQ NQ + V R + + L W V+S I+
Sbjct: 133 IEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIE--E 190
Query: 396 KITEDGSHSQAVQGL 410
+++ H + GL
Sbjct: 191 QVSRANQHKEQQLGL 205
>MGI|MGI:1349400 [details] [associations]
symbol:Cops7a "COP9 (constitutive photomorphogenic) homolog,
subunit 7a (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=ISO] [GO:0010388 "cullin deneddylation"
evidence=ISO] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
MGI:MGI:1349400 GO:GO:0005737 GO:GO:0008180 GO:GO:0010388 CTD:50813
eggNOG:NOG289374 HOGENOM:HOG000006003 HOVERGEN:HBG051138 KO:K12180
OMA:HNVRQLE OrthoDB:EOG42Z4R2 EMBL:AF071316 EMBL:AK010726
EMBL:AK013155 EMBL:AK019122 EMBL:BC003724 EMBL:AF240179
IPI:IPI00123465 IPI:IPI00317701 RefSeq:NP_001157561.1
RefSeq:NP_036133.1 UniGene:Mm.244536 ProteinModelPortal:Q9CZ04
SMR:Q9CZ04 STRING:Q9CZ04 PhosphoSite:Q9CZ04 PaxDb:Q9CZ04
PRIDE:Q9CZ04 DNASU:26894 Ensembl:ENSMUST00000032220
Ensembl:ENSMUST00000112439 GeneID:26894 KEGG:mmu:26894
UCSC:uc009dsr.2 UCSC:uc009dss.2 GeneTree:ENSGT00390000013069
NextBio:304727 Bgee:Q9CZ04 Genevestigator:Q9CZ04
GermOnline:ENSMUSG00000030127 Uniprot:Q9CZ04
Length = 275
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 50/195 (25%), Positives = 94/195 (48%)
Query: 219 AKEEAVRTII-EFVKSPDMFQC-DLLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLE 276
AK A+ T+I + +++P ++ +LLDMP + +L ++ +AS ++LL +F YL
Sbjct: 22 AKGAALATLIHQVLEAPGVYVFGELLDMPNVRELA-ESDFASTFRLLTVFAYGTYADYLA 80
Query: 277 FQAGNSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINN-DEVEKWV 335
+A N L ++ K+R +S+V L + IPY ++ + L + N ++E V
Sbjct: 81 -EARNLPPLTD---AQKN---KLRHLSVVTLAAKVKC-IPYAVLLEALALRNVRQLEDLV 132
Query: 336 VKARTAKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQATN 395
++A A ++ +DQ NQ + V R + + L W V+S I+
Sbjct: 133 IEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIAQTLQEWCVGCEVVLSGIE--E 190
Query: 396 KITEDGSHSQAVQGL 410
+++ H + GL
Sbjct: 191 QVSRANQHKEQQLGL 205
>TAIR|locus:2171998 [details] [associations]
symbol:AT5G45620 "AT5G45620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0010498 "proteasomal protein catabolic process" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
[GO:0051604 "protein maturation" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000502 eggNOG:NOG272621
HOGENOM:HOG000216633 KO:K03039 OMA:INQVEQV ProtClustDB:CLSN2690225
EMBL:AY093136 EMBL:BT003384 EMBL:AY230841 IPI:IPI00516535
RefSeq:NP_199375.2 UniGene:At.23294 UniGene:At.74818
ProteinModelPortal:Q8RWF0 IntAct:Q8RWF0 STRING:Q8RWF0 PaxDb:Q8RWF0
PRIDE:Q8RWF0 EnsemblPlants:AT5G45620.1 GeneID:834602
KEGG:ath:AT5G45620 TAIR:At5g45620 InParanoid:Q8RWF0
PhylomeDB:Q8RWF0 ArrayExpress:Q8RWF0 Genevestigator:Q8RWF0
Uniprot:Q8RWF0
Length = 386
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 51/226 (22%), Positives = 107/226 (47%)
Query: 178 ALFLGIANVLKESRSSSKDSFKFLTKYLATFSGED---AHTMDEAKEEAVRTIIEFVKSP 234
A F +++ + R D +K YLA S ED + +D A + ++ ++
Sbjct: 158 ANFYWVSSQYHKCRQEFSDFYKSALLYLAYTSVEDLSESFKLDLAFDLSLSALL----GE 213
Query: 235 DMFQC-DLLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEF-QAGNSALLKSYGLVH 292
+++ +LL P + L +Y +L+ F L Y E + N++L+ LV
Sbjct: 214 NIYNFGELLAHPILKSLLG-TNVEWLYHILQAFNHGDLVQYQELCRVHNASLIAQPALVE 272
Query: 293 ED--CIAKMRLMSLVDLGSN---ESGQIPYGLIKDTLQINNDEVEKWVVKARTAKLMDCK 347
+ + K+ ++ L+++ + E IP +I + +++ ++VE ++K+ + L++
Sbjct: 273 NEKKLLEKINILCLIEIIFSRPAEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGI 332
Query: 348 MDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQA 393
+DQ+N + V RV G Q + LR +L +W V + +++A
Sbjct: 333 IDQVNGTIYVSWAQPRVLGIPQIKALRDQLDSWVDKVHTTLLSVEA 378
>UNIPROTKB|F5H7C6 [details] [associations]
symbol:COPS7A "COP9 signalosome complex subunit 7a"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005634 GO:GO:0005737 HGNC:HGNC:16758 ChiTaRS:COPS7A
EMBL:AC125494 IPI:IPI01013606 ProteinModelPortal:F5H7C6 SMR:F5H7C6
Ensembl:ENST00000541866 ArrayExpress:F5H7C6 Bgee:F5H7C6
Uniprot:F5H7C6
Length = 192
Score = 119 (46.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 47/177 (26%), Positives = 87/177 (49%)
Query: 219 AKEEAVRTII-EFVKSPDMFQC-DLLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLE 276
AK A+ T+I + +++P ++ +LLDMP + +L ++ +AS ++LL +F YL
Sbjct: 22 AKGAALATLIHQVLEAPGVYVFGELLDMPNVRELA-ESDFASTFRLLTVFAYGTYADYLA 80
Query: 277 FQAGNSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINN-DEVEKWV 335
+A N L ++ K+R +S+V L + IPY ++ + L + N ++E V
Sbjct: 81 -EARNLPPLTE---AQKN---KLRHLSVVTLAAKVKC-IPYAVLLEALALRNVRQLEDLV 132
Query: 336 VKARTAKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQ 392
++A A ++ +DQ NQ + V R + + L W V+S I+
Sbjct: 133 IEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIE 189
>UNIPROTKB|F6QE33 [details] [associations]
symbol:COPS7A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0008180 GO:GO:0010388 CTD:50813 KO:K12180
OMA:HNVRQLE GeneTree:ENSGT00390000013069 EMBL:DAAA02014461
IPI:IPI00907970 RefSeq:NP_001098801.2 RefSeq:NP_001157560.1
UniGene:Bt.42676 Ensembl:ENSBTAT00000014754 GeneID:505079
KEGG:bta:505079 NextBio:20866973 Uniprot:F6QE33
Length = 275
Score = 121 (47.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 49/195 (25%), Positives = 94/195 (48%)
Query: 219 AKEEAVRTII-EFVKSPDMFQC-DLLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLE 276
AK A+ T+I + +++P ++ +LLDMP + +L ++ +AS ++LL +F YL
Sbjct: 22 AKGAALATLIHQVLEAPGVYVFGELLDMPNVRELA-ESDFASTFRLLTVFAYGTYADYLA 80
Query: 277 FQAGNSALLKSYGLVHEDCIAKMRLMSLVDLGSNESGQIPYGLIKDTLQINN-DEVEKWV 335
+A N L ++ K+R +S+V L + IPY ++ + L + N ++E V
Sbjct: 81 -EARNLPPLTE---AQKN---KLRHLSVVTLAAKVKC-IPYAVLLEALALRNVRQLEDLV 132
Query: 336 VKARTAKLMDCKMDQMNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQATN 395
++A A ++ +DQ +Q + V R + + L W V+S I+
Sbjct: 133 IEAVYADVLRGSLDQRHQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIE--E 190
Query: 396 KITEDGSHSQAVQGL 410
+++ H + GL
Sbjct: 191 QVSRANQHKEQQLGL 205
>TAIR|locus:504955552 [details] [associations]
symbol:AT4G19006 "AT4G19006" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=TAS]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005829 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0030163 GO:GO:0000502
eggNOG:NOG272621 HOGENOM:HOG000216633 KO:K03039 OMA:LAHPILE
EMBL:AY230842 EMBL:AK117761 IPI:IPI00529601 RefSeq:NP_680721.2
UniGene:At.21756 ProteinModelPortal:Q8GYA6 IntAct:Q8GYA6
STRING:Q8GYA6 PaxDb:Q8GYA6 PRIDE:Q8GYA6 EnsemblPlants:AT4G19006.1
GeneID:827638 KEGG:ath:AT4G19006 TAIR:At4g19006 InParanoid:Q8GYA6
PhylomeDB:Q8GYA6 ProtClustDB:CLSN2690225 Genevestigator:Q8GYA6
Uniprot:Q8GYA6
Length = 386
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 48/223 (21%), Positives = 104/223 (46%)
Query: 178 ALFLGIANVLKESRSSSKDSFKFLTKYLATFSGEDAHTMDEAKEEAVRTIIEFVKSPDMF 237
A F +++ + R + +K YLA ++ D+ + + A + + +++
Sbjct: 158 ANFFWVSSQYHKVRQEFSEFYKNALLYLA-YTSVDSLSESFKLDLAFDLSLSALLGENIY 216
Query: 238 QC-DLLDMPAIGQLENDAKYASVYQLLKIFLTQRLDGYLEF-QAGNSALLKSYGLVHED- 294
+LL P + L +Y +L+ F L Y E + N++L LV +
Sbjct: 217 NFGELLAHPILKSLLG-TNVEWLYHILQAFNHGDLVQYQELCRVHNASLSAQPALVENEK 275
Query: 295 -CIAKMRLMSLVDLGSN---ESGQIPYGLIKDTLQINNDEVEKWVVKARTAKLMDCKMDQ 350
+ K+ ++ L+++ + E IP +I + +++ ++VE ++K+ + L++ +DQ
Sbjct: 276 KLLEKINILCLIEIIFSRPAEDRTIPLSVIAERTKLSIEDVEHLLMKSLSVHLIEGILDQ 335
Query: 351 MNQVVIVRRCTERVFGQHQWQTLRTKLSTWRANVANVISTIQA 393
+N V V RV G Q ++LR +L +W V + +++A
Sbjct: 336 VNGTVYVSWAQPRVLGIPQIKSLRDQLDSWVDKVHTTLLSVEA 378
>SGD|S000002835 [details] [associations]
symbol:RPN9 "Non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IDA]
[GO:0005198 "structural molecule activity" evidence=IMP]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0034515 "proteasome storage granule"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0043248 "proteasome assembly" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 SGD:S000002835 EMBL:U33007 GO:GO:0005198
EMBL:BK006938 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0043248
GO:GO:0008541 GO:GO:0006511 RefSeq:NP_010720.3 GeneID:852042
KEGG:sce:YDR432W GO:GO:0034515 PDB:4B4T PDBsum:4B4T
eggNOG:NOG272621 HOGENOM:HOG000216633 KO:K03039 OMA:LAHPILE
GeneTree:ENSGT00390000001802 OrthoDB:EOG4XSPZG PIR:S69708
RefSeq:NP_010715.3 ProteinModelPortal:Q04062 DIP:DIP-5261N
IntAct:Q04062 MINT:MINT-529103 STRING:Q04062 PaxDb:Q04062
PeptideAtlas:Q04062 EnsemblFungi:YDR427W GeneID:852037
KEGG:sce:YDR427W CYGD:YDR427w NextBio:970278 Genevestigator:Q04062
GermOnline:YDR427W Uniprot:Q04062
Length = 393
Score = 115 (45.5 bits), Expect = 0.00088, P = 0.00088
Identities = 44/205 (21%), Positives = 90/205 (43%)
Query: 196 DSFKFLTK-YLATFSGEDAHTMDEAKEEAVRTIIEFVKSPDMFQC-DLLDMPAIGQLEND 253
+SF + + YL+T + T+ E ++ A I + ++ +LL P + + ND
Sbjct: 186 NSFYYTSLLYLSTLEPSTSITLAERQQLAYDLSISALLGDKIYNFGELLHHPIMETIVND 245
Query: 254 AKYASVYQLLKIFLT---QRLDGYLEFQAGNSALLKSYGLVHEDCIA-KMRLMSLVD-LG 308
+ Y ++QLL + D ++ Q +L HE + K+ LM+L++ +
Sbjct: 246 SNYDWLFQLLNALTVGDFDKFDSLIKVQISKIPILAQ----HESFLRQKICLMTLIETVF 301
Query: 309 SNESGQIPYGLIKDTLQINNDEVEKWVVKARTAKLMDCKMDQMNQVVIVRRCTERVFGQH 368
+ + I + D VE V++A + L+ +DQ+N++V + R+
Sbjct: 302 VKNIRMLSFEDISKATHLPKDNVEHLVMRAISLGLLKGSIDQVNELVTISWVQPRIISGD 361
Query: 369 QWQTLRTKLSTWRANVANVISTIQA 393
Q ++ +L W V + ++A
Sbjct: 362 QITKMKDRLVEWNDQVEKLGKKMEA 386
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 413 413 0.00080 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 622 (66 KB)
Total size of DFA: 261 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.72u 0.20s 33.92t Elapsed: 00:00:01
Total cpu time: 33.73u 0.20s 33.93t Elapsed: 00:00:01
Start: Fri May 10 04:12:08 2013 End: Fri May 10 04:12:09 2013