BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>015105
MAMMLLIQKVASSRMMAMEKLLVDPRCQPQQLDEYIRIPKETIDILKDQVFGFDTFFVTN
QEPYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTL
QPETTAVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVI
GVHELGHILAAKSTGVELGVPYFVPSWQIGSFGAITRIRNIVSKREDLLKVAAAGPLAGF
SLGFVLFLVGFIFPPSDGIGIVVDASVFHESFLAGGFAKLLLGDVLKDGTPISVNPLVIW
AWAGLLINAINSIPAGELDGGRIAFALWGRKASTRLTGVSIVLLGLSSLFSDVTFYWVVL
VFFLQRGPIAPLSEEITDPDDKYIALGVLVLFLGLLVCLPYPFPFSDQAVSNF

High Scoring Gene Products

Symbol, full name Information P value
EGY2
AT5G05740
protein from Arabidopsis thaliana 5.3e-143
EGY1
ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1
protein from Arabidopsis thaliana 8.1e-30
EGY3
ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3
protein from Arabidopsis thaliana 4.5e-16

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  015105
        (413 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2166389 - symbol:EGY2 "ethylene-dependent grav...  1398  5.3e-143  1
TAIR|locus:2182372 - symbol:EGY1 "ETHYLENE-DEPENDENT GRAV...   243  8.1e-30   2
TAIR|locus:2030938 - symbol:EGY3 "ETHYLENE-DEPENDENT GRAV...   225  4.5e-16   1


>TAIR|locus:2166389 [details] [associations]
            symbol:EGY2 "ethylene-dependent gravitropism-deficient
            and yellow-green-like 2" species:3702 "Arabidopsis thaliana"
            [GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS]
            [GO:0006508 "proteolysis" evidence=IEA;ISS] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid
            membrane" evidence=IDA] [GO:0006655 "phosphatidylglycerol
            biosynthetic process" evidence=RCA] [GO:0009793 "embryo development
            ending in seed dormancy" evidence=RCA] [GO:0010027 "thylakoid
            membrane organization" evidence=RCA] [GO:0010103 "stomatal complex
            morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
            reproductive phase transition of meristem" evidence=RCA]
            [GO:0016226 "iron-sulfur cluster assembly" evidence=RCA]
            [GO:0019288 "isopentenyl diphosphate biosynthetic process,
            mevalonate-independent pathway" evidence=RCA] [GO:0048481 "ovule
            development" evidence=RCA] InterPro:IPR008915 Pfam:PF02163
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006508 GO:GO:0004222
            GO:GO:0009535 EMBL:AB005237 eggNOG:COG0750 IPI:IPI00523158
            RefSeq:NP_196193.1 UniGene:At.32959 ProteinModelPortal:Q9FFK3
            SMR:Q9FFK3 STRING:Q9FFK3 MEROPS:M50.A01 PaxDb:Q9FFK3 PRIDE:Q9FFK3
            EnsemblPlants:AT5G05740.1 GeneID:830458 KEGG:ath:AT5G05740
            TAIR:At5g05740 HOGENOM:HOG000006203 InParanoid:Q9FFK3 OMA:FLQRGPI
            PhylomeDB:Q9FFK3 ProtClustDB:CLSN2686663 ArrayExpress:Q9FFK3
            Genevestigator:Q9FFK3 Uniprot:Q9FFK3
        Length = 556

 Score = 1398 (497.2 bits), Expect = 5.3e-143, P = 5.3e-143
 Identities = 268/379 (70%), Positives = 301/379 (79%)

Query:    28 QPQQLDEYIRIPKETIDILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTYEKIST 87
             QP QLD+ +R+PKETIDIL+ QVFGFDTFFVT+QEPYEGGVLFKGNLRG+ A +YEKI T
Sbjct:   169 QPLQLDDSMRLPKETIDILRGQVFGFDTFFVTSQEPYEGGVLFKGNLRGKPATSYEKIKT 228

Query:    88 RMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTLQPETTAVPEWFAAGAFGLVTVFTLLLR 147
             RM+N FGDQYKLFLL NPEDDKPVAVVVPR++L+PETTAVPEWFAAG+FGLV +FTL LR
Sbjct:   229 RMENNFGDQYKLFLLTNPEDDKPVAVVVPRRSLEPETTAVPEWFAAGSFGLVALFTLFLR 288

Query:   148 NVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPSW 207
             NVPALQS+LLS FDNL LL +GLPGALVTALV+GVHELGHIL A S G++LGVP+FVPSW
Sbjct:   289 NVPALQSDLLSAFDNLELLKDGLPGALVTALVLGVHELGHILVANSLGIKLGVPFFVPSW 348

Query:   208 QIGSFGAITRIRNIVSKREDLLKVAAAGPLAXXXXXXXXXXXXXXXPPSDGIGIVVDASV 267
             QIGSFGAITRI+NIV+KREDLLKVAAAGPLA               PPSDGIG+VVDASV
Sbjct:   349 QIGSFGAITRIKNIVAKREDLLKVAAAGPLAGFSLGLILFLIGLFVPPSDGIGVVVDASV 408

Query:   268 FHESXXXXXXXXXXXXDVLKDGTPISVNPLVIWAWAGLLINAINSIPAGELDGGRIAFAL 327
             FHES            D LK+GT IS+NPLVIWAWAGLLIN INSIPAGELDGG+IAF++
Sbjct:   409 FHESFLAGGIAKLLLGDALKEGTSISLNPLVIWAWAGLLINGINSIPAGELDGGKIAFSI 468

Query:   328 WGRKASTRLTXXXXXXXXXXXXXXDVTFYWVVLVFFLQRGPIAPLSEEITDPDDKYIAXX 387
             WGRK +TRLT              DV FYWVVL+FFLQRGPIAPL+EEIT PDDKY++  
Sbjct:   469 WGRKTATRLTGASIALLGLSALFSDVAFYWVVLIFFLQRGPIAPLAEEITVPDDKYVSLG 528

Query:   388 XXXXXXXXXXXXPYPFPFS 406
                         PYPF F+
Sbjct:   529 ILVLFLSLLVCLPYPFAFT 547


>TAIR|locus:2182372 [details] [associations]
            symbol:EGY1 "ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT
            AND YELLOW-GREEN 1" species:3702 "Arabidopsis thaliana" [GO:0004222
            "metalloendopeptidase activity" evidence=IEA;IDA] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
            evidence=ISS] [GO:0009416 "response to light stimulus"
            evidence=IEP] [GO:0009630 "gravitropism" evidence=IMP] [GO:0009723
            "response to ethylene stimulus" evidence=IEP] [GO:0009959 "negative
            gravitropism" evidence=IMP] [GO:0010027 "thylakoid membrane
            organization" evidence=IMP] [GO:0010207 "photosystem II assembly"
            evidence=IMP] [GO:0048564 "photosystem I assembly" evidence=IMP]
            [GO:0009658 "chloroplast organization" evidence=IMP] [GO:0043157
            "response to cation stress" evidence=IMP] [GO:0060359 "response to
            ammonium ion" evidence=IMP] InterPro:IPR008915 Pfam:PF02163
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0009723
            GO:GO:0006508 GO:GO:0004222 GO:GO:0009658 GO:GO:0010027
            GO:GO:0009416 GO:GO:0043157 GO:GO:0060359 GO:GO:0010207
            GO:GO:0009959 GO:GO:0048564 EMBL:AY050809 EMBL:BT001978
            IPI:IPI00540823 RefSeq:NP_198372.1 UniGene:At.26562
            ProteinModelPortal:Q949Y5 STRING:Q949Y5 MEROPS:M50.A02 PRIDE:Q949Y5
            EnsemblPlants:AT5G35220.1 GeneID:833476 KEGG:ath:AT5G35220
            TAIR:At5g35220 HOGENOM:HOG000070550 InParanoid:Q949Y5 OMA:GWGFYRA
            PhylomeDB:Q949Y5 ProtClustDB:CLSN2686469 Genevestigator:Q949Y5
            Uniprot:Q949Y5
        Length = 548

 Score = 243 (90.6 bits), Expect = 8.1e-30, Sum P(2) = 8.1e-30
 Identities = 65/224 (29%), Positives = 96/224 (42%)

Query:   162 NLNLLTNGLPGALVTAL-VIGV---HELGHILAAKSTGVELGVPYFVPSWQIGSFGAITR 217
             ++ LL   +  AL  A  V+G+   HELGH LAA    V+L +PYF+P+  +GSFGAIT+
Sbjct:   286 DMELLYPFVDAALPLAYGVLGILLFHELGHFLAAVPKKVKLSIPYFIPNITLGSFGAITQ 345

Query:   218 IRNIVSKREDLLKVAAAGPLAXXXXXXXXXXXXX--XXPPSDGIGIV-VDASVFHESXXX 274
              ++I+  R   + ++ AGP A                  P     +V V + +F  S   
Sbjct:   346 FKSILPDRSTKVDISLAGPFAGAALSVSMFAVGLFLSTEPDAANDLVQVPSMLFQGSLLL 405

Query:   275 XXXXXXXXXDVLKDGTPISVNPLVIWAWAGLLINAINSIPAGELDGGRIAFALWGRKAST 334
                              +S++PLVI  W GL   A N +P G LDGGR     +G+ A  
Sbjct:   406 GLISRATLGYAALHAATVSIHPLVIAGWCGLTTTAFNMLPVGCLDGGRAVQGAFGKNALV 465

Query:   335 RLTXXXXXXXXXXXXXXDVTFYWVVLVFFLQRGPIAPLSEEITD 378
                               +   W + V   QR P  P   ++T+
Sbjct:   466 TFGLSTYVMLGLRVLGGPLALPWGLYVLICQRTPEKPCLNDVTE 509

 Score = 145 (56.1 bits), Expect = 8.1e-30, Sum P(2) = 8.1e-30
 Identities = 25/77 (32%), Positives = 46/77 (59%)

Query:    37 RIPKETIDILKDQVFGFDTFFVTNQEPYEG---GVLFKGNLRGQAAKTYEKISTRMKNKF 93
             ++    + ++KD++FG+ TF+VT +EP+     G+LF GNLRG+    + K+  ++    
Sbjct:   138 KVDPADVKLIKDKLFGYSTFWVTKEEPFGDLGEGILFLGNLRGKKEDVFAKLQRKLVEVA 197

Query:    94 GDQYKLFLLVNPEDDKP 110
              D+Y LF++  P  + P
Sbjct:   198 SDKYNLFMIEEPNSEGP 214


>TAIR|locus:2030938 [details] [associations]
            symbol:EGY3 "ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT
            AND YELLOW-GREEN-LIKE 3" species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009408 "response to
            heat" evidence=IEP;RCA] [GO:0009644 "response to high light
            intensity" evidence=IEP;RCA] [GO:0042542 "response to hydrogen
            peroxide" evidence=IEP;RCA] [GO:0006457 "protein folding"
            evidence=RCA] EMBL:CP002684 EMBL:AC034106 GO:GO:0009408
            GO:GO:0009644 GO:GO:0042542 IPI:IPI00539019 PIR:H86313
            RefSeq:NP_173229.1 UniGene:At.20966 UniGene:At.66886
            ProteinModelPortal:Q9LMU1 STRING:Q9LMU1 PRIDE:Q9LMU1
            EnsemblPlants:AT1G17870.1 GeneID:838366 KEGG:ath:AT1G17870
            TAIR:At1g17870 InParanoid:Q9LMU1 OMA:NPSIEAA PhylomeDB:Q9LMU1
            ProtClustDB:CLSN2682120 Genevestigator:Q9LMU1 Uniprot:Q9LMU1
        Length = 573

 Score = 225 (84.3 bits), Expect = 4.5e-16, P = 4.5e-16
 Identities = 88/368 (23%), Positives = 152/368 (41%)

Query:    41 ETIDILK-DQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKL 99
             + +D+ K    FGFDTFF T+   +  G +F GNLR    +   K+  ++    G    +
Sbjct:   176 KALDLNKLKSCFGFDTFFATDVRRFGDGGIFIGNLRKPIDEVTPKLEAKLSEAAGRDVVV 235

Query:   100 FLLVNPEDD--KPVAVVVPRKT--LQPETTAVPE-WFAAGAFGL-VTVF-TLLLRNVPAL 152
             + +    ++  K V +V P+    LQ E+T +   W    A  L VT F T+ L +   L
Sbjct:   236 WFMEERSNEITKQVCMVQPKAEIDLQFESTRLSTPWGYVSAIALCVTTFGTIALMSGFFL 295

Query:   153 QSNLLSTFDNLNLLTNGLP--GALVTALVIGVHELGHILAAKSTGVELGVPYFVPSWQIG 210
             + +  +TFD+   + N +P  G  ++  ++GV E+   + A   GV+L   + VPS   G
Sbjct:   296 KPD--ATFDDY--IANVVPLFGGFLS--ILGVSEIATRVTAARHGVKLSPSFLVPSNWTG 349

Query:   211 SFGAITRIRNIVSKREDLLKVAAAGPLAXXXXXXXXXXXXXXXPPSDGIG---IVVDASV 267
               G +    +++  ++ L  +  A   +                 S   G   + +    
Sbjct:   350 CLGVMNNYESLLPNKKALFDIPVARTASAYLTSLLLAAAAFISDGSFNGGDNALYIRPQF 409

Query:   268 FHESXXXXXXX------XXXXXDVLK---DGTPISVNPLVIWAWAGLLINAINSIPAGEL 318
             F  +                  +VL    +G  + V+PL      G+++ ++N +P G L
Sbjct:   410 FDNNPLLSFVQFVVGPYADDLGNVLPNAVEGVGVPVDPLAFAGLLGMVVTSLNLLPCGRL 469

Query:   319 DGGRIAFALWGRKASTRLTXXXXXXXXXXXXXXDVT-FYWVVLVFFLQRGPIAPLSEEIT 377
             +GGRIA A++GR  +  L+               V    W +   F + G   P  +EIT
Sbjct:   470 EGGRIAQAMFGRSTAAILSFTTSLLLGIGGLSGSVLCLAWGLFATFFRGGEETPAKDEIT 529

Query:   378 DPDDKYIA 385
                D   A
Sbjct:   530 PVGDDRFA 537


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.139   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      413       358   0.00081  117 3  11 22  0.37    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  219 KB (2121 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.77u 0.16s 24.93t   Elapsed:  00:00:01
  Total cpu time:  24.77u 0.16s 24.93t   Elapsed:  00:00:01
  Start:  Fri May 10 04:14:31 2013   End:  Fri May 10 04:14:32 2013

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