BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 015105
         (413 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q57837|Y392_METJA Zinc metalloprotease MJ0392 OS=Methanocaldococcus jannaschii
           (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
           100440) GN=MJ0392 PE=1 SV=1
          Length = 339

 Score = 40.4 bits (93), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 42/150 (28%)

Query: 182 VHELGHILAAKSTGVELGVPYFVPSWQIGSFGAITRIRNIVSKREDLLKVAAAGPLAGFS 241
           +HELGH   AK  GV++     +P   IG    + +I      +E  L++  AGPL  F 
Sbjct: 53  LHELGHSYVAKKYGVKIEKILLLP---IGGVAMMDKI-----PKEGELRIGIAGPLVSFI 104

Query: 242 LGFVLFLVGFIFPPSDGIGIVVDASVFHESFLAGGFAKLLLGDVLKDGTPISVNPLVIWA 301
           +G VL +V   F                              D+  +G P+     ++  
Sbjct: 105 IGIVLLIVSQFF------------------------------DININGYPLLYTLSLLNL 134

Query: 302 WAGLLINAINSIPAGELDGGRIAFALWGRK 331
             G      N IPA  +DGGRI  A+  +K
Sbjct: 135 MLG----GFNLIPAFPMDGGRILRAILSKK 160


>sp|Q9PKW7|Y344_CHLMU Putative zinc metalloprotease TC_0344 OS=Chlamydia muridarum
           (strain MoPn / Nigg) GN=TC_0344 PE=3 SV=1
          Length = 619

 Score = 33.5 bits (75), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 54/132 (40%), Gaps = 42/132 (31%)

Query: 173 ALVTALVIGVHELGHILAAKSTG--VELGVPYFVPS----------WQIGS--FGAITRI 218
           AL    +I +HELGH+LAAK+ G  VE     F P+          ++IG+  FG   RI
Sbjct: 10  ALALGFLILIHELGHLLAAKAVGMTVESFSIGFGPALVRKKMGSIEYRIGAIPFGGYVRI 69

Query: 219 ----RNIVSKREDLLK-------------------VAAAGPLAG-----FSLGFVLFLVG 250
               RN     ED  K                   V AAGPLA      F+ G + F  G
Sbjct: 70  KGMDRNDKEISEDREKTVYDIPGGFFSKSPWKRIFVLAAGPLANILVALFAFGILYFSGG 129

Query: 251 FIFPPSDGIGIV 262
              P S+   IV
Sbjct: 130 RTKPFSEHTSIV 141


>sp|Q9PNM6|Y1068_CAMJE Putative zinc metalloprotease Cj1068 OS=Campylobacter jejuni subsp.
           jejuni serotype O:2 (strain NCTC 11168) GN=Cj1068 PE=3
           SV=1
          Length = 368

 Score = 32.3 bits (72), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 21/31 (67%)

Query: 170 LPGALVTALVIGVHELGHILAAKSTGVELGV 200
           L   LV + +I  HELGH LAA+S GV++ V
Sbjct: 23  LATVLVISFLIFFHELGHFLAARSLGVKVEV 53


>sp|O84075|Y072_CHLTR Putative zinc metalloprotease CT_072 OS=Chlamydia trachomatis
           (strain D/UW-3/Cx) GN=CT_072 PE=3 SV=1
          Length = 619

 Score = 32.0 bits (71), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 6/46 (13%)

Query: 172 GALVTALVIGVHELGHILAAKSTGVELGVPYFVPSWQIGSFGAITR 217
            AL    +I +HELGH+LAAK+ G+       V S+ IG   A+ R
Sbjct: 9   AALALGFLILIHELGHLLAAKAVGMS------VESFSIGFGPALVR 48


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.142    0.426 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,431,370
Number of Sequences: 539616
Number of extensions: 6818230
Number of successful extensions: 15910
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 15903
Number of HSP's gapped (non-prelim): 12
length of query: 413
length of database: 191,569,459
effective HSP length: 120
effective length of query: 293
effective length of database: 126,815,539
effective search space: 37156952927
effective search space used: 37156952927
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)