Query         015108
Match_columns 413
No_of_seqs    269 out of 1422
Neff          6.6 
Searched_HMMs 13730
Date          Mon Mar 25 06:50:16 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015108.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015108hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1ezfa_ a.128.1.2 (A:) Squalen 100.0 1.2E-74 8.5E-79  575.6  31.8  328   35-365     1-331 (333)
  2 d2q80a1 a.128.1.1 (A:6-296) Ge  93.9    0.86 6.2E-05   41.3  16.0  141  138-281   108-277 (291)
  3 d1kiya_ a.128.1.5 (A:) Trichod  92.8     2.2 0.00016   39.8  17.2  171   55-242    78-257 (354)
  4 d1v4ea_ a.128.1.1 (A:) Octopre  87.8     2.3 0.00017   38.0  12.0   93  136-231   120-225 (280)
  5 d1fpsa_ a.128.1.1 (A:) Farnesy  82.9      17  0.0012   33.0  17.9   98  137-237   152-273 (348)
  6 d1rqja_ a.128.1.1 (A:) Farnesy  80.7     4.2  0.0003   36.5  10.3  122  146-281   153-281 (299)
  7 d1rtra_ a.128.1.1 (A:) Farnesy  77.4      10 0.00075   33.6  11.8  120  147-280   149-274 (290)
  8 d1n1ba2 a.128.1.3 (A:271-598)   66.9      44  0.0032   30.0  22.1  231    8-270    18-276 (328)
  9 d1ps1a_ a.128.1.4 (A:) Pentale  62.0      47  0.0034   28.6  21.6  202   52-274    50-271 (311)
 10 d5easa2 a.128.1.3 (A:221-548)   42.9 1.1E+02  0.0079   27.1  22.5  277    8-322    18-322 (328)
 11 d1di1a_ a.128.1.4 (A:) Aristol  30.9 1.5E+02   0.011   25.1  19.0  192   58-274    57-267 (300)

No 1  
>d1ezfa_ a.128.1.2 (A:) Squalene synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-74  Score=575.60  Aligned_cols=328  Identities=50%  Similarity=0.869  Sum_probs=301.3

Q ss_pred             hhHHHHHHHHhhcCCCHHHHHHhcChhhhhHHHHHHHHHHHhhhhccCCCCCccchHHHHHHHHHHHcccccccccCCCc
Q 015108           35 PHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKE  114 (413)
Q Consensus        35 ~~~~~C~~il~~~srSF~~ai~~Lp~~lR~av~alYaf~R~lD~I~Dd~~~~~~~k~~~L~~~~~~l~~~~w~f~~G~~~  114 (413)
                      .++++|+++++++|||||+++++||+++|++|+++|+|||.+|||+|+++.+.+.|.+.|++|++.+.+..|....+.+.
T Consensus         1 ~sl~~C~~~l~~~SrSF~~a~~~Lp~~~R~~v~~lYafcR~~DdI~D~~~~~~~~k~~~L~~~~~~l~~~~~~~~~~~~~   80 (333)
T d1ezfa_           1 NSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEK   80 (333)
T ss_dssp             CHHHHHHHHHHHHCSSHHHHHHTSCTHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTTCTTCCCCCCCST
T ss_pred             ChHHHHHHHHHhhCccHHHHHHHCCHHHHHHHHHHHHHHHHhhhhHhCCCCCHHHHHHHHHHHHHHHHHhhhcccccCcc
Confidence            37899999999999999999999999999999999999999999999999999999999999999999877765556677


Q ss_pred             chHHHhhHHHHHHHHhhccHHHHHHHHHHHHhhHhHHHhhhhccCCCHHHHHHHHHhhhhHHHHHHHHHhcccCCCCC--
Q 015108          115 YKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDL--  192 (413)
Q Consensus       115 ~~~ll~~~~~v~~~f~~l~~~~~~lI~di~~~m~~gm~~dl~~~~~T~~dl~~YC~~VAG~VG~ll~~l~~~~~~~~~--  192 (413)
                      +++++.+++.++.+|..+++.++..+.++++.|+.||++++.++++|++||+.|||+|||+||+|++++|+..+..+.  
T Consensus        81 ~~~ll~~~~~v~~~~~~l~~~~~~~i~~~~~~m~~gm~d~~~~~~~t~~dL~~Ycy~VAG~VG~~l~~l~~~~~~~~~~~  160 (333)
T d1ezfa_          81 DRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLV  160 (333)
T ss_dssp             THHHHHTHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTSCCCSHHHHHHHHHHHTHHHHHHHHHHHHHHTSSCHHH
T ss_pred             hHHHHhhccHHHHHHHHHHHHhccchHHHHHHHhccHHHHccCcCCCHHHHHHHHHHHHHHHHHHHHHHhCcCCCccccH
Confidence            889999999999999999999999999999999999999998999999999999999999999999999987543321  


Q ss_pred             -ChhHHHHHHHHHHHHHHHHHhcHhhhhhCCCCCccccHHHHHHcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHH
Q 015108          193 -APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCL  271 (413)
Q Consensus       193 -~~~~~A~~mG~aLQltNILRD~~ED~~~~~~GR~ylP~e~l~~~g~~~~dl~~~~~~~~~~~~l~~lv~~A~~hl~~a~  271 (413)
                       ...+.|.+||.|||+||||||++||++   +||+|||+|+|++||++++|+.++++++++..++++++.+|..||++|+
T Consensus       161 ~~~~~~A~~lG~AlQltNIlRDi~eD~~---~gR~YlP~e~l~~~g~~~~dl~~~~~~~~~~~~~~~l~~~A~~~~~~a~  237 (333)
T d1ezfa_         161 GEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVI  237 (333)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHTHHHHHH---HTCCCSCHHHHTTTCSSGGGGGSGGGHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHh---CCcEECCHHHHHHcCCCHHHHHhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence             234789999999999999999999999   8999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhchhhhhhhhhhhhHHHHHHHHHHHhcCCCCccCccccChhHHHHHHHHcCChhHHHHHHHHHHHHhcccCCCCCC
Q 015108          272 KYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDP  351 (413)
Q Consensus       272 ~yl~~L~~~~~~~f~aiP~~mAiatL~~~~~n~~vf~~~vki~k~~~~~l~~ra~~~~~v~~~~~~~~~~~~~k~~~~dp  351 (413)
                      .|+..||.++++.||++|++|+..|++.+++|+++|+++|||+|++++++|++++|+.+++.+|++|++++++|++|+||
T Consensus       238 ~y~~~lp~~~~~~~~~~~~~~a~~tl~~~~~~~~~~~~~vkisr~~~~~l~~~~~~~~~~~~~f~~~~~~~~~k~~~~dp  317 (333)
T d1ezfa_         238 TYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDP  317 (333)
T ss_dssp             HHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTCGGGGTSCCCC----------CTTSHHHHHHHHHHHHHHHHHHCCTTST
T ss_pred             HHHHHCCchhHHHHHHHHHHHHHHHHHHHHcCchhcCCCeEeeHHHHHHHHHHhccHHHHHHHHHHHHHhhcccCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHH
Q 015108          352 NATKTLSRVEAIQK  365 (413)
Q Consensus       352 ~~~~~~~~~~~i~~  365 (413)
                      |+.+|.+.|++|+.
T Consensus       318 ~~~~~~~~~~~~~~  331 (333)
T d1ezfa_         318 SSSKTRQIISTIRT  331 (333)
T ss_dssp             THHHHHHHHHHHHT
T ss_pred             ChHHHHHHHHHhhc
Confidence            99999999999953


No 2  
>d2q80a1 a.128.1.1 (A:6-296) Geranylgeranyl pyrophosphate synthetase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.92  E-value=0.86  Score=41.28  Aligned_cols=141  Identities=12%  Similarity=0.055  Sum_probs=83.9

Q ss_pred             HHHHHHHHhhHhHHHhhhh----ccCCCHHHHHHHHHhhhhHHHHHHHHHhcccCCCCCChhHHHHHHHHHHHHHHHHHh
Q 015108          138 DAIEDITKRMGAGMAKFIC----KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRD  213 (413)
Q Consensus       138 ~lI~di~~~m~~gm~~dl~----~~~~T~~dl~~YC~~VAG~VG~ll~~l~~~~~~~~~~~~~~A~~mG~aLQltNILRD  213 (413)
                      ..+.+.+.++..|...|+.    ....|+++|..-+++-.|+...+.+.+-...+........++.++|.|+|+.|=+.|
T Consensus       108 ~~~~~~~~~~~~gq~~d~~~~~~~~~~s~~~y~~ii~~KT~~Lf~~~~~~ga~~~~~~~~l~~~g~~lG~afQi~DD~ld  187 (291)
T d2q80a1         108 KLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYAN  187 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhHhccccccccccccccCCHHHHHHHHHhccchhhHhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHhhh
Confidence            3344455566667777764    235789999888887777776666555433222223455889999999999998888


Q ss_pred             cH-----------hhhhhCCCCCccccHHHHHHcCCCh---hhhh-cccCCHH-HHHHH---------HHHHHHHHHHHH
Q 015108          214 YL-----------EDINEIPKCRMFWPREIWSKYVNKL---EDLK-YEENSDK-AVQCL---------NDMVTNALMHVE  268 (413)
Q Consensus       214 ~~-----------ED~~~~~~GR~ylP~e~l~~~g~~~---~dl~-~~~~~~~-~~~~l---------~~lv~~A~~hl~  268 (413)
                      +.           .|+.   .|+.=||-=..-+.+...   .++. ....++. ...++         ...-..+..+..
T Consensus       188 ~~~~~~~~GK~~g~Dl~---~gK~Tlpvi~al~~~~~~~~l~~il~~~~~~~~~~~~i~~~l~~~ga~~~a~~~~~~~~~  264 (291)
T d2q80a1         188 LHSKEYSENKSFCEDLT---EGKFSFPTIHAIWSRPESTQVQNILRQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEA  264 (291)
T ss_dssp             HHCC------CTTHHHH---HTCCCHHHHHHHHHSTTCCHHHHHHHHTCCCHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hccchhhccccccchhc---cCCCcHHHHHHHHhcccHHHHHHHHhcccCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            74           6777   588878864333333211   1222 2222222 22222         222344566777


Q ss_pred             HHHHHHHhchhhh
Q 015108          269 DCLKYMSALRDHA  281 (413)
Q Consensus       269 ~a~~yl~~L~~~~  281 (413)
                      +|.+.+..+++.+
T Consensus       265 ~A~~~L~~l~~~~  277 (291)
T d2q80a1         265 KAYKQIDARGGNP  277 (291)
T ss_dssp             HHHHHHHHTTCCH
T ss_pred             HHHHHHHcCCCCH
Confidence            7777777777543


No 3  
>d1kiya_ a.128.1.5 (A:) Trichodiene synthase {Fusarium sporotrichioides [TaxId: 5514]}
Probab=92.82  E-value=2.2  Score=39.80  Aligned_cols=171  Identities=11%  Similarity=0.070  Sum_probs=92.7

Q ss_pred             HHhcChhhhhHHHHHHHHHHHhhhhccCCCCCccchHHHHHHHHHHHcccccccccCCCcchHHHhhHHHHHHHHhhccH
Q 015108           55 IQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGK  134 (413)
Q Consensus        55 i~~Lp~~lR~av~alYaf~R~lD~I~Dd~~~~~~~k~~~L~~~~~~l~~~~w~f~~G~~~~~~ll~~~~~v~~~f~~l~~  134 (413)
                      --.+|++.+..|++++++.-.+||+.|+..       .-|+.|+..+-.       |++..++++..|......+...-.
T Consensus        78 yp~~~~e~~~~Ial~t~~~~~lDD~~~~~~-------~~l~~f~~~l~~-------G~~q~~p~l~~f~~~L~~~~~~~g  143 (354)
T d1kiya_          78 WAKVSKECMADLSIHYTYTLVLEDSKDDPY-------PTMVNYFDDLQA-------GREQAHPWWALVNEHFPNVLRHFG  143 (354)
T ss_dssp             STTSCHHHHHHHHHHHHHHHHHTTCCSCSH-------HHHTTHHHHHHH-------TCCCSSHHHHHHHHHHHHHHTTSC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHhccccccch-------HHHHHHHHHHHc-------CCCCccHHHHHHHHHHHHHHHHcc
Confidence            357899999999999999999999988652       356677777754       655566788888887777655444


Q ss_pred             HH-HHHHHHHHHhhHhHHHhhhh--ccCCCHHHHHHHHHhhhhHHHHHHHHHhcccCC-CCCChhHHHHHHHHHHHHHHH
Q 015108          135 GY-QDAIEDITKRMGAGMAKFIC--KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGT-EDLAPDSLSNSMGLFLQKTNI  210 (413)
Q Consensus       135 ~~-~~lI~di~~~m~~gm~~dl~--~~~~T~~dl~~YC~~VAG~VG~ll~~l~~~~~~-~~~~~~~~A~~mG~aLQltNI  210 (413)
                      ++ ...|..-+-+..+|......  ..+++-.++-.|-+...|.-.-...-+|...-. +.....++...+..+...++.
T Consensus       144 ~~~~~~i~~s~l~fv~a~~~E~~~~~~~p~s~~y~~yrR~~sG~~e~ya~f~fp~~~fpe~~~~~~~~~ai~~~~~~i~~  223 (354)
T d1kiya_         144 PFCSLNLIRSTLDFFEGCWIEQYNFGGFPGSHDYPQFLRRMNGLGHCVGASLWPKEQFNERSLFLEITSAIAQMENWMVW  223 (354)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCCCTTCTTHHHHHHHHHHCHHHHHHTTCCTTTCCTTTSHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHHhccCcHHHHHHHHcchhcCChHHHHHHHHHHHHHHHHHHHH
Confidence            43 22222222222334333322  224444444444444444333333333322111 111122333334444444444


Q ss_pred             HHhcH---hh--hhhCCCCCccccHHHHHHcCCChhh
Q 015108          211 IRDYL---ED--INEIPKCRMFWPREIWSKYVNKLED  242 (413)
Q Consensus       211 LRD~~---ED--~~~~~~GR~ylP~e~l~~~g~~~~d  242 (413)
                      .-|+.   ..  ..   ..+.=++.-....+|++..+
T Consensus       224 ~NDi~SfyKE~~~~---ge~~N~V~vla~~~g~s~~e  257 (354)
T d1kiya_         224 VNDLMSFYKEFDDE---RDQISLVKNYVVSDEISLHE  257 (354)
T ss_dssp             HHHHHHHHHHHTCT---TCCCCHHHHHHHHHTCCHHH
T ss_pred             hhhhhhcchhhhcC---CCcccHHHHHHHHhCCCHHH
Confidence            44443   32  22   23444556677788887665


No 4  
>d1v4ea_ a.128.1.1 (A:) Octoprenyl-diphosphate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=87.83  E-value=2.3  Score=38.02  Aligned_cols=93  Identities=14%  Similarity=0.031  Sum_probs=62.6

Q ss_pred             HHHHHHHHHHhhHhHHHhhhh--ccCCCHHHHHHHHHhhhhHHHHHHHHHhcc-cCCCCCChhHHHHHHHHHHHHHHHHH
Q 015108          136 YQDAIEDITKRMGAGMAKFIC--KEVESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTEDLAPDSLSNSMGLFLQKTNIIR  212 (413)
Q Consensus       136 ~~~lI~di~~~m~~gm~~dl~--~~~~T~~dl~~YC~~VAG~VG~ll~~l~~~-~~~~~~~~~~~A~~mG~aLQltNILR  212 (413)
                      ....+.+.+..+..|...|..  ....|.+++..-+++-.|....+.+.+-.. +|........++.++|.|+|+.|=+-
T Consensus       120 ~~~~l~~~~~~~~~Gq~~d~~~~~~~~t~~~y~~~i~~KT~~lf~~~~~~ga~l~g~~~~~l~~~g~~lG~afQi~DD~l  199 (280)
T d1v4ea_         120 LRRAFLNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQLPALLEGELGEDLYNLGVTIGTIYQMFDDIM  199 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccchhhcccchhHHHHHHHhccCCCCHHHHHHHHHhccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHhhc
Confidence            344445566667778777764  334689999888888887777666654322 23222233478999999999999888


Q ss_pred             hcH----------hhhhhCCCCCccccHH
Q 015108          213 DYL----------EDINEIPKCRMFWPRE  231 (413)
Q Consensus       213 D~~----------ED~~~~~~GR~ylP~e  231 (413)
                      |+.          .|+.   .|++=||-=
T Consensus       200 d~~~~~~~GK~~g~Dl~---~gK~T~p~i  225 (280)
T d1v4ea_         200 DFAGMEKIGKDGFLDLK---NGVASFPLV  225 (280)
T ss_dssp             HHTTCCSCCTTSSCCCT---TTTCCHHHH
T ss_pred             cccchhhhcccchhhHh---CCCccHHHH
Confidence            864          4666   577777753


No 5  
>d1fpsa_ a.128.1.1 (A:) Farnesyl diphosphate synthase (geranyltranstransferase) {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=82.94  E-value=17  Score=32.99  Aligned_cols=98  Identities=15%  Similarity=0.190  Sum_probs=59.9

Q ss_pred             HHHHHHHHHhhHhHHHhhhh-c---c----CCCHHHHHHHHHhhhhHHH--HHHHHHhcccCCCCC----ChhHHHHHHH
Q 015108          137 QDAIEDITKRMGAGMAKFIC-K---E----VESIDDYDEYCYYVAGLVG--LGLSKLFYASGTEDL----APDSLSNSMG  202 (413)
Q Consensus       137 ~~lI~di~~~m~~gm~~dl~-~---~----~~T~~dl~~YC~~VAG~VG--~ll~~l~~~~~~~~~----~~~~~A~~mG  202 (413)
                      .+.+.+.+..+..|-..|+. .   .    ..|.++|..-+.+-.|..+  ..++......+..+.    ....++..+|
T Consensus       152 ~~~~~~~~~~~~~GQ~ldl~~~~~~~~~~~~~t~~~Y~~~i~~KTa~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~lG  231 (348)
T d1fpsa_         152 LELFLQTAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMYMVGIDSKEEHENAKAILLEMG  231 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSCTTTCCSSSCCHHHHHHHHHHHTHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred             HHhhhhhhhHHHHHHHHHHhhhccccccccccCHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccccchhhccccccccc
Confidence            33444555566778777774 1   1    3488888888877666442  222221111111121    1236788999


Q ss_pred             HHHHHHHHHHhcH----------hhhhhCCCCCccccHHHHHHcC
Q 015108          203 LFLQKTNIIRDYL----------EDINEIPKCRMFWPREIWSKYV  237 (413)
Q Consensus       203 ~aLQltNILRD~~----------ED~~~~~~GR~ylP~e~l~~~g  237 (413)
                      .|+|+.|=+-|+-          .|+.   .|+.-||-=..-+.+
T Consensus       232 iaFQI~DDilD~~gd~~~~GK~g~Dl~---egK~Tlpii~al~~~  273 (348)
T d1fpsa_         232 EYFQIQDDYLDCFGDPALTGKVGTDIQ---DNKCSWLVVQCLQRV  273 (348)
T ss_dssp             HHHHHHHHHHHHSCCSSCCSSCSCCCS---SCCCCHHHHHHHHTC
T ss_pred             hHHHHHHHHhhhhcchhccCccccccc---CCccHHHHHHHHHhC
Confidence            9999999998873          5787   588889876544443


No 6  
>d1rqja_ a.128.1.1 (A:) Farnesyl diphosphate synthase (geranyltranstransferase) {Escherichia coli [TaxId: 562]}
Probab=80.71  E-value=4.2  Score=36.55  Aligned_cols=122  Identities=18%  Similarity=0.149  Sum_probs=70.6

Q ss_pred             hhHhHHHhhhh--ccCCCHHHHHHHHHhhhhHHHHHHHHHhccc-CCCC----CChhHHHHHHHHHHHHHHHHHhcHhhh
Q 015108          146 RMGAGMAKFIC--KEVESIDDYDEYCYYVAGLVGLGLSKLFYAS-GTED----LAPDSLSNSMGLFLQKTNIIRDYLEDI  218 (413)
Q Consensus       146 ~m~~gm~~dl~--~~~~T~~dl~~YC~~VAG~VG~ll~~l~~~~-~~~~----~~~~~~A~~mG~aLQltNILRD~~ED~  218 (413)
                      .|..|-..|+.  ....+.++|.....+-.|+.....+.+.+.. +..+    ......+.++|.|+|+.+=+-|+..|-
T Consensus       153 ~l~~GQ~ldl~~~~~~~~~~~~~~i~~~KT~~l~~~~~~~~a~~~~~~~~~~~~~l~~~g~~lGiaFQi~DD~lD~~~~~  232 (299)
T d1rqja_         153 GMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDT  232 (299)
T ss_dssp             THHHHHHHHHHTTTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred             HHHHHHHHHHHhccCcccHHHHHHHHHHHHhhHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccch
Confidence            34557667774  4567888898888888887776666654321 1111    112368899999999998888776433


Q ss_pred             hhCCCCCccccHHHHHHcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhh
Q 015108          219 NEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHA  281 (413)
Q Consensus       219 ~~~~~GR~ylP~e~l~~~g~~~~dl~~~~~~~~~~~~l~~lv~~A~~hl~~a~~yl~~L~~~~  281 (413)
                      .+  .|.-            .-+|+.++..+=...-.+.+--..+.+++.++.+.+..+++.+
T Consensus       233 ~~--~GK~------------~g~Dl~egK~Tlp~i~~le~a~~~~~~~~~~~~~~l~~l~~~~  281 (299)
T d1rqja_         233 AT--LGKR------------QGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQS  281 (299)
T ss_dssp             HH--HSSC------------TTHHHHHTCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             hh--cCCc------------hhhHHHCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            21  1110            1134444444333333344444455566666776666666543


No 7  
>d1rtra_ a.128.1.1 (A:) Farnesyl diphosphate synthase (geranyltranstransferase) {Staphylococcus aureus [TaxId: 1280]}
Probab=77.36  E-value=10  Score=33.59  Aligned_cols=120  Identities=11%  Similarity=0.062  Sum_probs=65.0

Q ss_pred             hHhHHHhhhh--ccCCCHHHHHHHHHhhhhHHHHHHHHHhccc-CCCC---CChhHHHHHHHHHHHHHHHHHhcHhhhhh
Q 015108          147 MGAGMAKFIC--KEVESIDDYDEYCYYVAGLVGLGLSKLFYAS-GTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINE  220 (413)
Q Consensus       147 m~~gm~~dl~--~~~~T~~dl~~YC~~VAG~VG~ll~~l~~~~-~~~~---~~~~~~A~~mG~aLQltNILRD~~ED~~~  220 (413)
                      |+.|-..|+.  ...-+.++|..-+++-.|.....++.+.... +...   ....+.+.++|.|+|+.|=+-|+--|-..
T Consensus       149 ~~~GQ~~Dl~~~~~~~~~~~~~~i~~~KT~~l~~~~~~~~a~~~~~~~~~~~~l~~~g~~lG~aFQi~DD~lD~~g~~~~  228 (290)
T d1rtra_         149 MVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK  228 (290)
T ss_dssp             HHHHHHHHHHTTTSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHhHHHHHHhcccCCCHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHh
Confidence            4457666764  3455788898888888887776666554321 2111   11236888999999999988887544331


Q ss_pred             CCCCCccccHHHHHHcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhchhh
Q 015108          221 IPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDH  280 (413)
Q Consensus       221 ~~~GR~ylP~e~l~~~g~~~~dl~~~~~~~~~~~~l~~lv~~A~~hl~~a~~yl~~L~~~  280 (413)
                        -|.   |         .-+|+.++..+--..-.+...-..+..+..++...+..+++.
T Consensus       229 --~GK---~---------~g~Di~~gK~T~p~i~a~~~a~~~~~~~~~~~~~~l~~~~~~  274 (290)
T d1rtra_         229 --LGK---K---------VGSDLENNKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQ  274 (290)
T ss_dssp             ---------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred             --hcc---C---------cccHhhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCc
Confidence              111   0         013444444333333333344445556666666666666543


No 8  
>d1n1ba2 a.128.1.3 (A:271-598) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]}
Probab=66.95  E-value=44  Score=29.98  Aligned_cols=231  Identities=13%  Similarity=0.085  Sum_probs=113.4

Q ss_pred             hcChhhhHHHHHHHHhhccccCCCC-CchhHHHHHHHHhhcCCCHHHHHHhcChh---hhhHHHHHHHHHHHhhhhccCC
Q 015108            8 LRHPDDLYPLLKLKMASRQAEKQIP-PEPHWAFCYSMLHKVSRSFALVIQQLGTD---LRNAVCIFYLVLRALDTVEDDT   83 (413)
Q Consensus         8 ~~hp~e~~~~~~~~~~~~~~~~~~~-~~~~~~~C~~il~~~srSF~~ai~~Lp~~---lR~av~alYaf~R~lD~I~Dd~   83 (413)
                      ..|-.|+..+-+|.---. .....| .+.-.-.||         |..+..+.||+   .|-.+.=.-.+.-.+||+=|.-
T Consensus        18 ~~hq~El~~l~rWwk~~~-l~~~l~faRdr~ve~Y---------fwa~~~~feP~~s~~Ri~~aK~~~l~~iiDD~yD~y   87 (328)
T d1n1ba2          18 ATHQQELKDLSRWWSRLC-FPEKLPFVRDRLVESF---------FWAVGMFEPHQHGYQRKMAATIIVLATVIDDIYDVY   87 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHT-HHHHCTTSCCCHHHHH---------HHHHHHCCSTTCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhC-CcccCCchHHHHHHHH---------HHHHHHhcChhhHHHHHHHHHHHHHHHhhhHHhccc
Confidence            358899999988743111 111122 122233343         44444455654   3666666667777888888754


Q ss_pred             CCCccchHHHHHHHHHHHccccccccc--CCCcc-hHHHhhHHHHHHHHhh--cc-------HHHHHHHHHHHHhhHhHH
Q 015108           84 SIPTDVKVPILIAFHRHVYDREWHFSC--GTKEY-KVLMDQFHHVSTAFLE--LG-------KGYQDAIEDITKRMGAGM  151 (413)
Q Consensus        84 ~~~~~~k~~~L~~~~~~l~~~~w~f~~--G~~~~-~~ll~~~~~v~~~f~~--l~-------~~~~~lI~di~~~m~~gm  151 (413)
                      .     -...|+.|-+.+..  |....  .-|.+ +.+...+..+..+...  ++       +..++...++++    ++
T Consensus        88 g-----t~eEl~~ft~ai~r--Wd~~~~~~lp~ymk~~~~~l~~~~~e~~~~~~~~~g~~~~~~lk~~w~~l~~----ay  156 (328)
T d1n1ba2          88 G-----TLDELELFTDTFKR--WDTESITRLPYYMQLCYWGVHNYISDAAYDILKEHGFFCLQYLRKSVVDLVE----AY  156 (328)
T ss_dssp             S-----CHHHHHHHHHHHHH--TCSSGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH----HH
T ss_pred             C-----CHHHHHHHHHHHHh--cCCcccccCcchHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH----HH
Confidence            3     23467788888864  54331  11211 2222233333322221  11       112333333333    44


Q ss_pred             Hhhhh----ccCCCHHHHHHHHHhhhhHHHHHHHHHhcccCCCCCC-hhHHHHHHHHHHHHHHHHHhcHhhh----hhCC
Q 015108          152 AKFIC----KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-PDSLSNSMGLFLQKTNIIRDYLEDI----NEIP  222 (413)
Q Consensus       152 ~~dl~----~~~~T~~dl~~YC~~VAG~VG~ll~~l~~~~~~~~~~-~~~~A~~mG~aLQltNILRD~~ED~----~~~~  222 (413)
                      -....    .-++|++|+..=..-+.|.....++..++-.+..... ..+...+-....++++++-=+..|+    .|  
T Consensus       157 l~EakW~~~g~vPt~eEYl~~~~vS~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~i~RL~nDi~~~~~E--  234 (328)
T d1n1ba2         157 FHEAKWYHSGYTPSLDEYLNIAKISVASPAIISPTYFTFANASHDTAVIDSLYQYHDILCLAGIILRLPDDLGTSYFE--  234 (328)
T ss_dssp             HHHHHHHHHTCCCCHHHHHHHHHHHTCHHHHHHHHHTTSTTCCCCHHHHHHHHTTCHHHHHHHHHHHHHHHHC-------
T ss_pred             HHHHHHHhcCCCCCHHHHHhhceehhhHHHHHHHHHHhCCCccchHHHHHHHhccHHHHHHHHHHHHHHhhhhhHHHH--
Confidence            33332    3489999998888877776555555555432111111 1111222233444444333222222    22  


Q ss_pred             CCCccccHH---HHHHcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHH
Q 015108          223 KCRMFWPRE---IWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC  270 (413)
Q Consensus       223 ~GR~ylP~e---~l~~~g~~~~dl~~~~~~~~~~~~l~~lv~~A~~hl~~a  270 (413)
                      +.|--.+..   .|.+||++.++         +..-+++++.++...+.+.
T Consensus       235 ~~rg~~~s~v~cymke~~~s~ee---------A~~~i~~~ie~~wk~ln~e  276 (328)
T d1n1ba2         235 LARGDVPKTIQCYMKETNASEEE---------AVEHVKFLIREAWKDMNTA  276 (328)
T ss_dssp             ----CCCCHHHHHHHHHCCCHHH---------HHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCcchHHHHHhccCCCCHHH---------HHHHHHHHHHHHHHHHHHH
Confidence            233333333   36678887654         6667888998888877653


No 9  
>d1ps1a_ a.128.1.4 (A:) Pentalenene synthase {Streptomyces sp., UC5319 [TaxId: 1931]}
Probab=61.95  E-value=47  Score=28.60  Aligned_cols=202  Identities=8%  Similarity=-0.104  Sum_probs=108.4

Q ss_pred             HHHHHhcChhhhhH---HHHHHHHHHHhhhhccCCCCCccchHHHHHHHHHHHcccccccccC--CCcchHHHhhHHHHH
Q 015108           52 ALVIQQLGTDLRNA---VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG--TKEYKVLMDQFHHVS  126 (413)
Q Consensus        52 ~~ai~~Lp~~lR~a---v~alYaf~R~lD~I~Dd~~~~~~~k~~~L~~~~~~l~~~~w~f~~G--~~~~~~ll~~~~~v~  126 (413)
                      .++....|..-.+.   ++-+..+.-..||+-|....   .-...+..+.+.+...   .. |  .....++...|..+.
T Consensus        50 ~~~a~~~P~~~~~rl~l~~~~~~~~f~~DD~~D~~~~---~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~l~d~~  122 (311)
T d1ps1a_          50 DLASRFYPHATGADLDLGVDLMSWFFLFDDLFDGPRG---ENPEDTKQLTDQVAAA---LD-GPLPDTAPPIAHGFADIW  122 (311)
T ss_dssp             HHHHHHCTTCCTHHHHHHHHHHHHHHHHHHTTSSGGG---GCHHHHHHHHHHHHGG---GT-SCCCTTSCHHHHHHHHHH
T ss_pred             HHHHHhCCCCCHHHHHHHHHHHHHHHHhcccccCccc---cCHHHHHHHHHHHHHh---hc-cCCCcccCHHHHHHHHHH
Confidence            34455555444433   45577888899999885421   1223555555555431   12 2  122345666677776


Q ss_pred             HHHhhc-cHHHHHHHHHHHHhhHhHHHhhhh-----ccCCCHHHHHHHHHhhhhHHHHHHHHHhcccCCCC-------CC
Q 015108          127 TAFLEL-GKGYQDAIEDITKRMGAGMAKFIC-----KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED-------LA  193 (413)
Q Consensus       127 ~~f~~l-~~~~~~lI~di~~~m~~gm~~dl~-----~~~~T~~dl~~YC~~VAG~VG~ll~~l~~~~~~~~-------~~  193 (413)
                      .++... .+....-+.+-+..+..|......     ..++|++||..+-....|.--....--++. |.+-       +.
T Consensus       123 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~e~~~r~~~~~~ps~~eYl~~R~~~~g~~~~~~l~~~~~-g~~lp~~v~~~~~  201 (311)
T d1ps1a_         123 RRTCEGMTPAWCARSARHWRNYFDGYVDEAESRFWNAPCDSAAQYLAMRRHTIGVQPTVDLAERAG-RFEVPHRVFDSAV  201 (311)
T ss_dssp             HHHHTTSCHHHHHHHHHHHHHHHHHHHHHHTTC-------CHHHHHHHHHHHTCHHHHHHHHHHHH-TCCCCHHHHTSHH
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHhcccHHHHHHHHHHHc-CCCCCHHHHhhcc
Confidence            666543 333333233334444456555443     236788888888777776533222222221 2211       11


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcHhhhhhCCCCCc--cccHHHHHHcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHH
Q 015108          194 PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM--FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCL  271 (413)
Q Consensus       194 ~~~~A~~mG~aLQltNILRD~~ED~~~~~~GR~--ylP~e~l~~~g~~~~dl~~~~~~~~~~~~l~~lv~~A~~hl~~a~  271 (413)
                      ...+-...+...-++|=|-.+..+..   .|-.  .++ =++.++|++.+         ++.+-+.+++......+.++.
T Consensus       202 ~~~l~~~~~~~~~l~NDi~S~~kE~~---~g~~~N~V~-vlm~~~g~s~~---------~A~~~v~~~~~~~~~~~~~~~  268 (311)
T d1ps1a_         202 MSAMLQIAVDVNLLLNDIASLEKEEA---RGEQNNMVM-ILRREHGWSKS---------RSVSHMQNEVRARLEQYLLLE  268 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTHHHHHH---TTCCCSHHH-HHHHHHCCCHH---------HHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhhhhHHHHHhhhc---cCCcCcHHH-HHHHccCCCHH---------HHHHHHHHHHHHHHHHHHHHH
Confidence            22566677777777887777777776   4543  222 24566777654         356667777777777776665


Q ss_pred             HHH
Q 015108          272 KYM  274 (413)
Q Consensus       272 ~yl  274 (413)
                      .-+
T Consensus       269 ~~l  271 (311)
T d1ps1a_         269 SCL  271 (311)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            544


No 10 
>d5easa2 a.128.1.3 (A:221-548) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=42.93  E-value=1.1e+02  Score=27.10  Aligned_cols=277  Identities=10%  Similarity=0.117  Sum_probs=132.1

Q ss_pred             hcChhhhHHHHHHHHhhccccCCCC-CchhHHHHHHHHhhcCCCHHHHHHhcChhh---hhHHHHHHHHHHHhhhhccCC
Q 015108            8 LRHPDDLYPLLKLKMASRQAEKQIP-PEPHWAFCYSMLHKVSRSFALVIQQLGTDL---RNAVCIFYLVLRALDTVEDDT   83 (413)
Q Consensus         8 ~~hp~e~~~~~~~~~~~~~~~~~~~-~~~~~~~C~~il~~~srSF~~ai~~Lp~~l---R~av~alYaf~R~lD~I~Dd~   83 (413)
                      ..|-.|+..+-+|.---.-. ..++ .+...-.||         |..+.....|+.   |-.+.=.-.+.-.+||+-|.-
T Consensus        18 ~~hq~El~~l~rWw~~~~l~-~~l~~aRdr~ve~Y---------fw~~~~~fEP~~s~~R~~~aK~~~l~ti~DD~yD~y   87 (328)
T d5easa2          18 MLHKQELAQVSRWWKDLDFV-TTLPYARDRVVECY---------FWALGVYFEPQYSQARVMLVKTISMISIVDDTFDAY   87 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHTHH-HHCTTSCCCHHHHH---------HHHHHHCCSGGGHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhCCc-ccCCchHHHHHHHH---------HHHHHhhcChhhHHHHHHHHHHHHHHHhhhhhcccC
Confidence            35889999998875532210 1122 123333343         344444444433   223333333444555555533


Q ss_pred             CCCccchHHHHHHHHHHHccccccccc--CCCcc-hHHHhhHHHHHHHHhh--ccH---HHHHHHHHHHHhhHhHHHhhh
Q 015108           84 SIPTDVKVPILIAFHRHVYDREWHFSC--GTKEY-KVLMDQFHHVSTAFLE--LGK---GYQDAIEDITKRMGAGMAKFI  155 (413)
Q Consensus        84 ~~~~~~k~~~L~~~~~~l~~~~w~f~~--G~~~~-~~ll~~~~~v~~~f~~--l~~---~~~~lI~di~~~m~~gm~~dl  155 (413)
                      .     -...|+.|-+.+..  |....  .-|++ +.+...+-.+..++..  .++   .....+.+..+++..++....
T Consensus        88 g-----t~eEl~~ft~ai~r--Wd~~~~~~lp~ymk~~~~~l~~~~~e~~~~~~~~~~~~~~~~l~~~w~~~~~~~l~EA  160 (328)
T d5easa2          88 G-----TVKELEAYTDAIQR--WDINEIDRLPDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEVVRNYNVES  160 (328)
T ss_dssp             C-----CHHHHHHHHHHHHH--TCSGGGGGSCHHHHHHHHHHHHHHHHHHHHHHTTTCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             C-----CHHHHHHHHHHHhc--CCcchhhhCCchHHHHHHHHHHHHHHHHHHHHHhcCeeeHHHHHHHHHHHHHHHHHHH
Confidence            2     34578888888875  54331  11221 2233333333332221  111   111122233333444554433


Q ss_pred             h----ccCCCHHHHHHHHHhhhhHHHHHHHHHhcccCCCCCC-------hhHHHHHHHHHHHHHHHHHhcHhhhhhCCCC
Q 015108          156 C----KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-------PDSLSNSMGLFLQKTNIIRDYLEDINEIPKC  224 (413)
Q Consensus       156 ~----~~~~T~~dl~~YC~~VAG~VG~ll~~l~~~~~~~~~~-------~~~~A~~mG~aLQltNILRD~~ED~~~~~~G  224 (413)
                      .    .-++|++||..-...++|..-..++-.++. |....+       ...+.+..|.-.-+.|=|..+.....   +|
T Consensus       161 ~W~~~g~vPt~eEYl~~~~~s~~~~~l~~~~~~~~-g~~~~e~~~~~~~~p~l~~~~~~i~RL~NDi~s~~~E~~---rG  236 (328)
T d5easa2         161 TWFIEGYTPPVSEYLSNALATTTYYYLATTSYLGM-KSATEQDFEWLSKNPKILEASVIICRVIDDTATYEVEKS---RG  236 (328)
T ss_dssp             HHHHHTCCCCHHHHHHHHTGGGCHHHHHHHHHHTC-TTCCHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             HHHhCCCCCChHhhhcceeeeehHHHHHHHHHHhC-CCCcHHHHHhcccchHHHHHHHHHHHHHhhhHHHHHHhc---cC
Confidence            2    359999999998877776665555555543 221111       11455566666677777777776666   56


Q ss_pred             CccccHH---HHHHcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhhhhhhhhHHHHH-HHHHHH
Q 015108          225 RMFWPRE---IWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAI-GTLALC  300 (413)
Q Consensus       225 R~ylP~e---~l~~~g~~~~dl~~~~~~~~~~~~l~~lv~~A~~hl~~a~~yl~~L~~~~~~~f~aiP~~mAi-atL~~~  300 (413)
                      -+  +.-   .+.++|++.++         +..-+++++.++...+.+.     .+.+.++-+.+. -.++-+ .++..+
T Consensus       237 ~~--~s~I~cym~e~g~t~Ee---------A~~~i~~~ie~~wk~ln~e-----~l~~~~~~~~~~-~~~~n~ar~~~~~  299 (328)
T d5easa2         237 QI--ATGIECCMRDYGISTKE---------AMAKFQNMAETAWKDINEG-----LLRPTPVSTEFL-TPILNLARIVEVT  299 (328)
T ss_dssp             CT--TCHHHHHHHHHTCCHHH---------HHHHHHHHHHHHHHHHHHH-----TSSSCSSCGGGT-HHHHHHHHHHHHH
T ss_pred             CC--CeeEEEEecCCCCCHHH---------HHHHHHHHHHHHHHHHHHH-----HhCCCCCCHHHH-HHHHHHHHHHHhh
Confidence            53  322   36778887654         5666888888888877643     223222111111 111222 223455


Q ss_pred             hc-CCCCccCccccChhHHHHHH
Q 015108          301 YN-NIEVFRGVVKMRRGLTAKVI  322 (413)
Q Consensus       301 ~~-n~~vf~~~vki~k~~~~~l~  322 (413)
                      |. +.|-|+.+-+.-|.....++
T Consensus       300 Y~~~~D~yt~~~~~~k~~i~~ll  322 (328)
T d5easa2         300 YIHNLDGYTHPEKVLKPHIINLL  322 (328)
T ss_dssp             TC-----------CCHHHHHHHH
T ss_pred             cCCCCCCCCCchHHHHHHHHHHh
Confidence            75 34666554445555554444


No 11 
>d1di1a_ a.128.1.4 (A:) Aristolochene synthase {Fungus (Penicillium roqueforti) [TaxId: 5082]}
Probab=30.89  E-value=1.5e+02  Score=25.07  Aligned_cols=192  Identities=13%  Similarity=0.019  Sum_probs=91.1

Q ss_pred             cChhhhhHHHHHHHHHHHhhhhccCCCCCccchHHHHHHHHHHHccccc-ccccCCCcchHHHhhHHHHHHHHhhccHHH
Q 015108           58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREW-HFSCGTKEYKVLMDQFHHVSTAFLELGKGY  136 (413)
Q Consensus        58 Lp~~lR~av~alYaf~R~lD~I~Dd~~~~~~~k~~~L~~~~~~l~~~~w-~f~~G~~~~~~ll~~~~~v~~~f~~l~~~~  136 (413)
                      .+++.-..++-++.+.-..||+-|+.+.  +.    .+.+.+.+....- ... ..+. .++...+..+.+++....+.+
T Consensus        57 a~~e~L~l~a~~~~w~f~~DD~~d~~~~--~~----~~~~~~~~~~~~~~~~~-~~~~-~~~~~~l~d~~~~~~~~~~~~  128 (300)
T d1di1a_          57 ALDDRIHFACRLLTVLFLIDDVLEHMSF--AD----GEAYNNRLIPISRGDVL-PDRT-KPEEFILYDLWESMRAHDAEL  128 (300)
T ss_dssp             SCTTTHHHHHHHHHHHHHHHHHHHHSCH--HH----HHHHHHHHHHHHHTSSC-CCTT-CHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHhhhhccCCh--hh----HHHHHHHHHHHhcCCCC-CCCc-CHHHHHHHHHHHHHHHHhHHH
Confidence            3456666677788899999999997642  21    2223333221100 001 1111 233444556655554333322


Q ss_pred             HHHHHHHHHhhHhHHHhhhh----ccCCCHHHHHHHHHhhhhHHHHHHHHHhcccCCCCC-----ChhHHHHHHHHHHHH
Q 015108          137 QDAIEDITKRMGAGMAKFIC----KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDL-----APDSLSNSMGLFLQK  207 (413)
Q Consensus       137 ~~lI~di~~~m~~gm~~dl~----~~~~T~~dl~~YC~~VAG~VG~ll~~l~~~~~~~~~-----~~~~~A~~mG~aLQl  207 (413)
                      ..   .+.+ +..++..-..    ..++|++||..+=....|.-....+--++. |.+-+     ....+....+...-+
T Consensus       129 ~~---~~~~-~~~~~~~e~~~~~~~~~psl~eYl~~R~~~~g~~~~~~l~e~~~-g~~lp~~~~~~~~~l~~~~~~~~~l  203 (300)
T d1di1a_         129 AN---EVLE-PTFVFMRAQTDRARLSIHELGHYLEYREKDVGKALLSALMRFSM-GLRLSADELQDMKALEANCAKQLSV  203 (300)
T ss_dssp             HH---HHHH-HHHHHHHTTTCCCCCCCCSHHHHHHHHHTCHHHHHHHHHHHHHH-TCCCCHHHHHTTHHHHHHHHHHHHH
T ss_pred             HH---HHHH-HHHHHHHHHHHhcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            22   1111 1123332221    347787777777666555432222222221 22111     112444555556666


Q ss_pred             HHHHHhcHhhhhhCCCCCc---------cccHHHHHHcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015108          208 TNIIRDYLEDINEIPKCRM---------FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYM  274 (413)
Q Consensus       208 tNILRD~~ED~~~~~~GR~---------ylP~e~l~~~g~~~~dl~~~~~~~~~~~~l~~lv~~A~~hl~~a~~yl  274 (413)
                      +|=|=.+..+..   .|-.         =+..=++.++|++.++         +.+.+.+++......+.+...-+
T Consensus       204 ~NDl~S~~KE~~---~g~~~~~~~~~~~N~V~vl~~~~g~s~~e---------A~~~~~~~~~~~~~~~~~~~~~~  267 (300)
T d1di1a_         204 VNDIYSYDKEEE---ASRTGHKEGAFLCSAVKVLAEESKLGIPA---------TKRVLWSMTREWETVHDEIVAEK  267 (300)
T ss_dssp             HHHHHHTTTTCC---C----------CCCHHHHHHHHHTCCHHH---------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhHHHHHHHHH---hcccccccccccccHHHHHHHhcCCCHHH---------HHHHHHHHHHHHHHHHHHHHHHH
Confidence            676666655554   2321         1233356677776543         55556666666666665555433


Done!