Query 015110
Match_columns 413
No_of_seqs 348 out of 2511
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 06:52:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015110.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015110hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dc8_A Dihydropyrimidinase; TI 100.0 2.3E-58 7.8E-63 464.8 30.3 347 43-413 1-357 (490)
2 3sfw_A Dihydropyrimidinase; hy 100.0 8.2E-55 2.8E-59 437.0 33.4 352 44-413 2-360 (461)
3 3e74_A Allantoinase; (beta/alp 100.0 6.8E-55 2.3E-59 438.2 28.6 347 43-413 23-376 (473)
4 3gri_A Dihydroorotase, dhoase; 100.0 1.1E-52 3.8E-57 417.1 30.6 342 45-413 2-344 (424)
5 3hm7_A Allantoinase; metallo-d 100.0 2.4E-52 8.4E-57 417.6 30.7 349 42-412 5-358 (448)
6 2fty_A Dihydropyrimidinase; al 100.0 8E-51 2.7E-55 415.8 30.2 351 41-412 1-413 (559)
7 3mpg_A Dihydroorotase, dhoase; 100.0 1.5E-50 5.2E-55 402.3 30.3 342 43-412 1-344 (428)
8 3pnu_A Dihydroorotase; TIM bar 100.0 5.2E-48 1.8E-52 371.4 15.6 261 92-403 22-291 (359)
9 2ftw_A Dihydropyrimidine amido 100.0 6.1E-46 2.1E-50 377.8 30.6 356 41-413 6-369 (521)
10 1gkp_A Hydantoinase; hydrolase 100.0 1.1E-45 3.7E-50 370.1 31.8 352 44-412 1-357 (458)
11 2vr2_A Dihydropyrimidinase; hy 100.0 4.4E-45 1.5E-49 373.1 31.2 359 41-413 25-392 (541)
12 1gkr_A Hydantoinase, non-ATP d 100.0 4.3E-44 1.5E-48 358.5 28.9 351 42-412 1-355 (458)
13 2z00_A Dihydroorotase; zinc bi 100.0 3.1E-43 1.1E-47 349.0 28.1 337 45-412 2-346 (426)
14 2vm8_A Dihydropyrimidinase-rel 100.0 1.1E-42 3.7E-47 352.6 30.5 355 41-412 24-386 (501)
15 2z26_A Dihydroorotase, dhoase; 100.0 4.5E-44 1.5E-48 345.4 18.7 268 92-403 4-280 (347)
16 1nfg_A D-hydantoinase; TIM bar 100.0 9.3E-43 3.2E-47 348.9 28.9 349 44-412 2-356 (457)
17 2gwn_A Dihydroorotase; zinc-bi 100.0 6E-42 2.1E-46 342.7 23.3 345 42-412 3-355 (452)
18 1xrt_A Dihydroorotase, dhoase; 100.0 5.3E-41 1.8E-45 337.2 27.2 343 39-412 43-388 (467)
19 3gip_A N-acyl-D-glutamate deac 100.0 9.5E-35 3.2E-39 292.5 26.3 274 41-361 5-341 (480)
20 1rk6_A D-aminoacylase; TIM bar 100.0 4.9E-30 1.7E-34 259.3 21.7 283 43-373 21-384 (496)
21 1e9y_B Urease subunit beta; hy 100.0 1.2E-27 3.9E-32 243.9 23.7 271 42-373 65-367 (569)
22 2r8c_A Putative amidohydrolase 99.9 2.4E-24 8.3E-29 213.3 19.5 270 42-370 3-328 (426)
23 1ra0_A Cytosine deaminase; alp 99.9 1E-23 3.5E-28 209.1 21.7 269 42-371 7-320 (430)
24 3be7_A Zn-dependent arginine c 99.9 1.6E-23 5.6E-28 206.0 21.8 268 42-371 5-320 (408)
25 3gnh_A L-lysine, L-arginine ca 99.9 6.9E-24 2.3E-28 208.2 17.6 185 44-234 3-230 (403)
26 2ics_A Adenine deaminase; TIM 99.9 5.9E-24 2E-28 207.0 14.8 257 42-370 4-274 (379)
27 1onw_A Isoaspartyl dipeptidase 99.9 5.8E-23 2E-27 201.0 21.8 288 41-402 6-315 (390)
28 3feq_A Putative amidohydrolase 99.9 6.1E-24 2.1E-28 209.9 14.6 266 42-370 3-325 (423)
29 2vun_A Enamidase; nicotinate d 99.9 1E-22 3.4E-27 198.9 21.9 256 42-369 1-277 (386)
30 2p9b_A Possible prolidase; pro 99.9 3.6E-23 1.2E-27 206.9 18.7 274 42-370 12-347 (458)
31 4ubp_C Protein (urease (chain 99.9 1.5E-22 5.1E-27 203.7 20.8 172 42-234 66-253 (570)
32 4ac7_C Urease subunit alpha; h 99.9 1.5E-22 5.1E-27 203.7 20.8 172 42-234 66-253 (570)
33 3h4u_A Amidohydrolase; signatu 99.9 2E-21 6.8E-26 195.2 26.7 278 38-372 24-351 (479)
34 2paj_A Putative cytosine/guani 99.9 3.4E-22 1.2E-26 201.5 20.6 185 41-234 8-252 (492)
35 2imr_A Hypothetical protein DR 99.9 5.3E-23 1.8E-27 203.4 13.5 184 40-238 34-249 (420)
36 2qt3_A N-isopropylammelide iso 99.9 1.5E-21 5.2E-26 191.5 22.7 258 42-370 4-305 (403)
37 2qs8_A XAA-Pro dipeptidase; am 99.9 9.6E-22 3.3E-26 194.1 20.7 188 39-234 3-239 (418)
38 3lnp_A Amidohydrolase family p 99.9 2.1E-21 7E-26 194.5 23.2 271 39-372 19-338 (468)
39 4gy7_A Urease; JACK bean, hydr 99.9 2.9E-22 9.8E-27 211.0 16.2 175 42-236 336-525 (840)
40 2i9u_A Cytosine/guanine deamin 99.9 1.8E-21 6.3E-26 193.3 19.8 273 39-371 5-323 (439)
41 4f0r_A 5-methylthioadenosine/S 99.9 1.6E-21 5.5E-26 194.1 17.9 269 42-372 5-311 (447)
42 4dyk_A Amidohydrolase; adenosi 99.9 3.1E-21 1E-25 192.3 18.6 269 42-372 7-313 (451)
43 2ogj_A Dihydroorotase; TIM bar 99.9 3.3E-21 1.1E-25 190.3 16.6 251 43-373 15-295 (417)
44 4dzh_A Amidohydrolase; adenosi 99.9 3.5E-21 1.2E-25 193.2 16.7 268 43-371 14-319 (472)
45 3ls9_A Triazine hydrolase; atr 99.9 4.4E-20 1.5E-24 184.1 24.5 182 45-233 2-241 (456)
46 2ood_A BLR3880 protein; PSI-II 99.9 3.1E-21 1.1E-25 193.7 15.8 271 44-372 4-330 (475)
47 1p1m_A Hypothetical protein TM 99.9 4.9E-21 1.7E-25 188.2 15.0 170 45-232 1-202 (406)
48 2q09_A Imidazolonepropionase; 99.8 1.7E-19 5.8E-24 177.9 22.7 184 43-233 5-245 (416)
49 4ep8_C Urease subunit alpha; a 99.8 7.2E-23 2.4E-27 210.0 -3.0 296 35-377 57-368 (566)
50 2vhl_A N-acetylglucosamine-6-p 99.8 2.6E-20 8.8E-25 182.5 13.3 177 43-232 3-204 (396)
51 3nqb_A Adenine deaminase 2; PS 99.8 6.7E-19 2.3E-23 181.0 21.5 179 42-233 34-224 (608)
52 4aql_A Guanine deaminase; hydr 99.8 1.9E-17 6.4E-22 166.2 25.0 187 41-236 29-269 (476)
53 3v7p_A Amidohydrolase family p 99.8 1.2E-17 4E-22 165.3 20.7 177 45-237 2-214 (427)
54 2puz_A Imidazolonepropionase; 99.8 4.7E-17 1.6E-21 160.4 23.5 183 43-232 15-256 (419)
55 2bb0_A Imidazolonepropionase; 99.8 4.1E-17 1.4E-21 160.9 21.8 183 43-232 5-251 (421)
56 3ooq_A Amidohydrolase; structu 99.8 2.9E-18 9.9E-23 168.0 11.6 92 42-137 4-119 (396)
57 1yrr_A N-acetylglucosamine-6-p 99.7 1E-17 3.6E-22 163.2 13.2 184 45-242 2-208 (382)
58 3hpa_A Amidohydrolase; signatu 99.7 9.6E-16 3.3E-20 152.6 25.8 94 42-137 28-154 (479)
59 4f0l_A Amidohydrolase; ssgcid, 99.7 7.3E-17 2.5E-21 161.0 17.3 60 41-109 10-70 (458)
60 3mdu_A N-formimino-L-glutamate 99.7 3.5E-16 1.2E-20 155.9 17.9 257 47-370 4-322 (453)
61 3icj_A Uncharacterized metal-d 99.7 5.2E-16 1.8E-20 157.1 15.7 65 44-108 37-105 (534)
62 3iv8_A N-acetylglucosamine-6-p 99.6 2.5E-15 8.7E-20 145.0 15.3 106 45-154 5-115 (381)
63 3ggm_A Uncharacterized protein 99.6 8.7E-16 3E-20 115.1 7.8 72 42-113 3-76 (81)
64 3mtw_A L-arginine carboxypepti 99.6 8.8E-14 3E-18 133.1 21.4 188 44-237 3-233 (403)
65 3mkv_A Putative amidohydrolase 99.5 2.6E-14 9.1E-19 137.4 8.9 94 41-137 2-109 (426)
66 1o12_A N-acetylglucosamine-6-p 99.5 4.7E-14 1.6E-18 137.1 7.5 85 59-157 28-113 (376)
67 1bf6_A Phosphotriesterase homo 98.9 4E-08 1.4E-12 91.3 15.7 207 99-369 6-243 (291)
68 2vc7_A Aryldialkylphosphatase; 98.4 7.6E-06 2.6E-10 76.8 16.3 210 99-369 17-257 (314)
69 1zzm_A Putative deoxyribonucle 98.2 2.3E-05 7.7E-10 71.4 14.9 123 100-233 5-136 (259)
70 2ob3_A Parathion hydrolase; me 98.2 6.8E-06 2.3E-10 77.8 11.1 223 99-369 16-268 (330)
71 2y1h_A Putative deoxyribonucle 98.2 4.4E-05 1.5E-09 70.0 16.0 127 99-233 5-148 (272)
72 4i6k_A Amidohydrolase family p 98.0 0.00014 4.8E-09 67.5 15.8 126 97-233 24-159 (294)
73 1xwy_A DNAse TATD, deoxyribonu 98.0 9.8E-05 3.4E-09 67.3 14.3 122 100-233 5-134 (264)
74 3rcm_A TATD family hydrolase; 97.9 0.00013 4.4E-09 67.4 13.7 126 99-233 2-136 (287)
75 2xio_A Putative deoxyribonucle 97.9 0.00012 4E-09 68.3 12.6 126 99-233 2-149 (301)
76 1yix_A Deoxyribonuclease YCFH; 97.9 0.00015 5E-09 66.0 12.7 121 100-233 3-133 (265)
77 3ipw_A Hydrolase TATD family p 97.9 0.00016 5.6E-09 67.7 13.2 128 99-233 27-177 (325)
78 3guw_A Uncharacterized protein 97.8 0.00052 1.8E-08 62.4 14.5 171 100-321 2-182 (261)
79 2dvt_A Thermophilic reversible 97.5 0.00012 4E-09 68.8 7.1 135 97-234 1-168 (327)
80 1j6o_A TATD-related deoxyribon 97.5 0.00025 8.4E-09 64.9 8.9 120 99-233 12-142 (268)
81 3gg7_A Uncharacterized metallo 97.4 0.00076 2.6E-08 61.0 10.3 118 100-233 3-127 (254)
82 3cjp_A Predicted amidohydrolas 97.4 0.0039 1.3E-07 56.7 15.3 128 177-373 102-231 (272)
83 4d9a_A 2-pyrone-4,6-dicarbaxyl 97.4 0.0033 1.1E-07 58.5 14.8 175 96-323 23-216 (303)
84 2ffi_A 2-pyrone-4,6-dicarboxyl 97.3 0.00072 2.5E-08 62.2 9.2 124 99-233 13-146 (288)
85 2gzx_A Putative TATD related D 97.3 0.0019 6.5E-08 58.5 11.6 123 100-233 2-131 (265)
86 4do7_A Amidohydrolase 2; enzym 97.3 0.0032 1.1E-07 58.5 13.0 152 100-298 5-170 (303)
87 3tn4_A Phosphotriesterase; lac 97.2 0.019 6.6E-07 54.4 17.7 109 209-369 191-301 (360)
88 3pnz_A Phosphotriesterase fami 97.1 0.012 4.1E-07 55.2 15.3 210 99-369 17-273 (330)
89 2f6k_A Metal-dependent hydrola 96.9 0.0021 7.3E-08 59.5 8.0 130 99-234 2-158 (307)
90 3ovg_A Amidohydrolase; structu 96.7 0.043 1.5E-06 52.1 15.8 212 99-370 21-276 (363)
91 3rhg_A Putative phophotriester 96.7 0.016 5.4E-07 55.2 12.7 112 210-369 178-295 (365)
92 2hbv_A 2-amino-3-carboxymucona 96.4 0.022 7.4E-07 53.5 11.4 53 177-233 128-180 (334)
93 3e2v_A 3'-5'-exonuclease; stru 96.2 0.023 7.9E-07 54.4 10.4 40 98-137 12-59 (401)
94 3gtx_A Organophosphorus hydrol 96.1 0.036 1.2E-06 52.2 11.0 213 99-369 32-281 (339)
95 2wm1_A 2-amino-3-carboxymucona 95.9 0.019 6.5E-07 53.9 7.9 53 177-233 124-177 (336)
96 3irs_A Uncharacterized protein 95.9 0.33 1.1E-05 44.4 16.2 163 119-321 50-215 (291)
97 3k2g_A Resiniferatoxin-binding 95.7 0.076 2.6E-06 50.5 11.3 114 210-369 189-305 (364)
98 2pgf_A Adenosine deaminase; me 95.7 0.075 2.6E-06 50.7 11.4 23 210-232 214-236 (371)
99 3rys_A Adenosine deaminase 1; 95.3 0.079 2.7E-06 49.9 10.0 40 187-232 162-201 (343)
100 3iar_A Adenosine deaminase; pu 95.0 0.48 1.7E-05 44.9 14.4 118 188-369 172-293 (367)
101 3nur_A Amidohydrolase; TIM bar 94.4 0.17 5.7E-06 48.0 9.5 54 177-234 142-196 (357)
102 3pao_A Adenosine deaminase; st 94.0 0.25 8.5E-06 46.1 9.6 39 188-232 160-198 (326)
103 3ij6_A Uncharacterized metal-d 92.8 0.15 5.1E-06 47.3 6.1 53 177-233 111-164 (312)
104 3qy7_A Tyrosine-protein phosph 91.8 1.2 4.1E-05 40.0 10.6 38 100-137 1-41 (262)
105 2wje_A CPS4B, tyrosine-protein 91.5 1.4 4.6E-05 39.1 10.6 40 98-137 3-45 (247)
106 4gxw_A Adenosine deaminase; am 91.2 0.42 1.4E-05 45.6 7.2 122 188-369 180-302 (380)
107 1eye_A DHPS 1, dihydropteroate 89.8 4.8 0.00016 36.4 12.6 123 177-318 30-177 (280)
108 1aj0_A DHPS, dihydropteroate s 88.3 8.9 0.0003 34.6 13.3 121 178-318 40-185 (282)
109 3aam_A Endonuclease IV, endoiv 87.7 9.7 0.00033 33.6 13.4 116 179-321 17-142 (270)
110 1tx2_A DHPS, dihydropteroate s 85.9 17 0.00057 33.1 13.7 122 178-318 65-204 (297)
111 4inf_A Metal-dependent hydrola 84.3 3.6 0.00012 38.9 8.9 53 178-234 161-214 (373)
112 3p6l_A Sugar phosphate isomera 83.7 9.2 0.00032 33.6 11.0 108 179-322 25-138 (262)
113 2gwg_A 4-oxalomesaconate hydra 81.4 5.8 0.0002 36.8 9.1 59 176-234 122-182 (350)
114 3lgd_A Adenosine deaminase CEC 79.5 5.6 0.00019 39.2 8.4 40 188-232 291-332 (508)
115 4dzi_A Putative TIM-barrel met 76.3 2.4 8.2E-05 40.9 4.7 58 177-234 176-234 (423)
116 3lmz_A Putative sugar isomeras 74.8 27 0.00094 30.3 11.1 48 179-230 33-80 (257)
117 2nx9_A Oxaloacetate decarboxyl 74.4 29 0.00098 33.7 11.8 106 119-236 103-213 (464)
118 2y5s_A DHPS, dihydropteroate s 73.7 52 0.0018 29.7 13.6 122 177-318 47-193 (294)
119 3tva_A Xylose isomerase domain 71.9 43 0.0015 29.6 11.9 47 180-231 25-71 (290)
120 1qtw_A Endonuclease IV; DNA re 69.3 55 0.0019 28.6 12.0 117 179-322 15-149 (285)
121 1m65_A Hypothetical protein YC 65.6 65 0.0022 27.6 13.1 36 100-136 3-38 (245)
122 1f6y_A 5-methyltetrahydrofolat 63.9 40 0.0014 29.9 9.6 119 178-318 27-160 (262)
123 1rqb_A Transcarboxylase 5S sub 63.8 88 0.003 30.9 12.8 107 119-236 120-232 (539)
124 3b4u_A Dihydrodipicolinate syn 63.6 70 0.0024 28.8 11.4 112 115-231 23-140 (294)
125 2dqw_A Dihydropteroate synthas 63.2 51 0.0017 29.8 10.2 117 178-314 54-192 (294)
126 3m5v_A DHDPS, dihydrodipicolin 62.4 27 0.00093 31.7 8.4 52 179-233 31-86 (301)
127 3dx5_A Uncharacterized protein 62.3 45 0.0015 29.3 9.9 21 211-231 84-105 (286)
128 1q7z_A 5-methyltetrahydrofolat 61.4 97 0.0033 30.8 12.8 120 179-319 343-474 (566)
129 1qwg_A PSL synthase;, (2R)-pho 61.3 85 0.0029 27.5 11.3 96 188-320 37-135 (251)
130 1nvm_A HOA, 4-hydroxy-2-oxoval 59.2 70 0.0024 29.5 10.8 50 180-235 153-205 (345)
131 2ehh_A DHDPS, dihydrodipicolin 58.6 81 0.0028 28.3 10.9 106 116-231 21-133 (294)
132 2q02_A Putative cytoplasmic pr 58.6 90 0.0031 27.0 12.2 17 211-227 85-101 (272)
133 3e96_A Dihydrodipicolinate syn 58.3 57 0.0019 29.7 9.9 107 115-231 32-144 (316)
134 2w9m_A Polymerase X; SAXS, DNA 57.8 1.4E+02 0.0047 29.7 13.4 36 100-137 328-363 (578)
135 2x7v_A Probable endonuclease 4 57.7 96 0.0033 27.0 12.9 117 179-322 15-148 (287)
136 1m3u_A 3-methyl-2-oxobutanoate 57.6 96 0.0033 27.5 10.7 44 176-231 94-137 (264)
137 2h9a_B CO dehydrogenase/acetyl 57.6 1.1E+02 0.0038 27.7 12.9 117 179-313 77-199 (310)
138 2yxg_A DHDPS, dihydrodipicolin 57.4 74 0.0025 28.5 10.4 107 116-231 21-133 (289)
139 3l21_A DHDPS, dihydrodipicolin 57.4 94 0.0032 28.1 11.1 106 115-230 35-147 (304)
140 3aal_A Probable endonuclease 4 57.2 52 0.0018 29.4 9.4 54 178-231 20-74 (303)
141 1xky_A Dihydrodipicolinate syn 57.2 90 0.0031 28.2 10.9 106 116-231 33-145 (301)
142 3cpr_A Dihydrodipicolinate syn 56.7 1.1E+02 0.0039 27.5 12.3 108 114-230 35-148 (304)
143 3tr9_A Dihydropteroate synthas 56.5 78 0.0027 28.9 10.2 120 178-318 51-199 (314)
144 2hk0_A D-psicose 3-epimerase; 56.2 1.1E+02 0.0037 27.2 11.7 45 182-231 42-86 (309)
145 3l21_A DHDPS, dihydrodipicolin 55.9 36 0.0012 30.9 8.0 51 179-232 39-92 (304)
146 3fkr_A L-2-keto-3-deoxyarabona 55.8 44 0.0015 30.4 8.6 50 179-231 32-84 (309)
147 2wkj_A N-acetylneuraminate lya 55.5 93 0.0032 28.1 10.7 105 117-231 33-145 (303)
148 3d0c_A Dihydrodipicolinate syn 55.2 82 0.0028 28.6 10.4 108 115-231 32-144 (314)
149 3mcm_A 2-amino-4-hydroxy-6-hyd 55.1 1.2E+02 0.0043 29.0 11.8 121 177-318 213-366 (442)
150 2ftp_A Hydroxymethylglutaryl-C 54.8 58 0.002 29.4 9.3 51 179-235 162-214 (302)
151 3dcp_A Histidinol-phosphatase; 54.5 1.2E+02 0.004 27.1 14.6 49 267-322 205-260 (283)
152 3flu_A DHDPS, dihydrodipicolin 54.4 85 0.0029 28.2 10.3 107 114-230 26-139 (297)
153 1xky_A Dihydrodipicolinate syn 54.2 56 0.0019 29.5 9.0 51 180-233 37-90 (301)
154 3flu_A DHDPS, dihydrodipicolin 53.9 80 0.0027 28.4 10.0 52 179-233 31-85 (297)
155 2vp8_A Dihydropteroate synthas 53.5 1.3E+02 0.0046 27.4 12.6 99 177-296 66-169 (318)
156 3bg3_A Pyruvate carboxylase, m 53.4 1.4E+02 0.005 30.5 12.7 107 119-236 200-317 (718)
157 3si9_A DHDPS, dihydrodipicolin 52.5 45 0.0016 30.4 8.1 52 179-233 46-100 (315)
158 2r8w_A AGR_C_1641P; APC7498, d 52.3 98 0.0033 28.4 10.4 107 115-231 54-167 (332)
159 3m0z_A Putative aldolase; MCSG 51.9 90 0.0031 27.0 9.0 73 180-297 149-222 (249)
160 2yci_X 5-methyltetrahydrofolat 51.6 1.3E+02 0.0044 26.7 12.0 121 178-319 36-170 (271)
161 3rcm_A TATD family hydrolase; 51.2 1.2E+02 0.0043 27.0 10.8 40 261-308 108-148 (287)
162 3s5o_A 4-hydroxy-2-oxoglutarat 51.0 49 0.0017 30.0 8.1 50 180-232 39-91 (307)
163 1n7k_A Deoxyribose-phosphate a 50.7 65 0.0022 28.0 8.4 108 112-233 32-142 (234)
164 3daq_A DHDPS, dihydrodipicolin 50.6 46 0.0016 29.9 7.8 52 179-233 26-80 (292)
165 3a5f_A Dihydrodipicolinate syn 50.1 61 0.0021 29.1 8.5 49 180-231 26-77 (291)
166 3m5v_A DHDPS, dihydrodipicolin 50.0 1E+02 0.0034 27.8 10.0 106 116-231 28-141 (301)
167 1f6k_A N-acetylneuraminate lya 50.0 1.2E+02 0.004 27.2 10.4 108 115-231 23-137 (293)
168 3b4u_A Dihydrodipicolinate syn 50.0 70 0.0024 28.8 8.9 49 180-231 28-79 (294)
169 2vc6_A MOSA, dihydrodipicolina 48.5 82 0.0028 28.3 9.1 107 116-231 21-133 (292)
170 2wkj_A N-acetylneuraminate lya 48.2 58 0.002 29.5 8.1 52 179-233 35-89 (303)
171 3tak_A DHDPS, dihydrodipicolin 47.7 89 0.003 28.0 9.2 106 115-230 21-133 (291)
172 2v9d_A YAGE; dihydrodipicolini 47.4 1.1E+02 0.0039 28.1 10.1 108 115-231 51-164 (343)
173 3daq_A DHDPS, dihydrodipicolin 47.1 88 0.003 28.1 9.1 105 117-230 24-134 (292)
174 2rfg_A Dihydrodipicolinate syn 47.0 78 0.0027 28.5 8.7 107 116-231 21-133 (297)
175 1o5k_A DHDPS, dihydrodipicolin 47.0 94 0.0032 28.1 9.3 106 117-231 34-145 (306)
176 3si9_A DHDPS, dihydrodipicolin 46.9 1.1E+02 0.0038 27.7 9.8 107 115-231 42-155 (315)
177 1o5k_A DHDPS, dihydrodipicolin 46.1 58 0.002 29.5 7.8 52 179-233 36-90 (306)
178 3qfe_A Putative dihydrodipicol 46.0 62 0.0021 29.5 8.0 51 179-232 35-88 (318)
179 2hmc_A AGR_L_411P, dihydrodipi 45.9 62 0.0021 29.9 8.0 50 180-232 51-100 (344)
180 4dpp_A DHDPS 2, dihydrodipicol 45.9 82 0.0028 29.3 8.8 49 180-231 84-135 (360)
181 2yxg_A DHDPS, dihydrodipicolin 45.9 66 0.0023 28.8 8.0 52 179-233 24-78 (289)
182 3kws_A Putative sugar isomeras 45.8 1.5E+02 0.0052 25.8 11.9 108 179-321 41-168 (287)
183 3na8_A Putative dihydrodipicol 45.4 94 0.0032 28.3 9.1 107 116-231 45-157 (315)
184 3tak_A DHDPS, dihydrodipicolin 45.3 94 0.0032 27.8 9.0 52 179-233 25-79 (291)
185 2qul_A D-tagatose 3-epimerase; 45.0 1.5E+02 0.0053 25.7 12.2 48 179-231 20-67 (290)
186 3m6y_A 4-hydroxy-2-oxoglutarat 44.6 96 0.0033 27.1 8.2 74 180-297 172-245 (275)
187 2vc6_A MOSA, dihydrodipicolina 44.6 53 0.0018 29.5 7.2 52 179-233 24-78 (292)
188 3cpr_A Dihydrodipicolinate syn 44.2 87 0.003 28.3 8.6 52 179-233 40-94 (304)
189 2r8w_A AGR_C_1641P; APC7498, d 44.2 68 0.0023 29.5 8.0 51 179-232 58-111 (332)
190 3h5d_A DHDPS, dihydrodipicolin 44.1 1.8E+02 0.0062 26.2 12.0 108 114-230 26-140 (311)
191 2v9d_A YAGE; dihydrodipicolini 44.1 68 0.0023 29.6 8.0 52 179-233 55-109 (343)
192 2yxo_A Histidinol phosphatase; 44.0 13 0.00044 32.8 2.9 36 100-136 1-36 (267)
193 2ojp_A DHDPS, dihydrodipicolin 43.7 1E+02 0.0035 27.6 9.0 107 115-231 21-134 (292)
194 3vni_A Xylose isomerase domain 43.5 1.7E+02 0.0057 25.6 12.9 49 178-231 19-68 (294)
195 3h5d_A DHDPS, dihydrodipicolin 43.4 1.3E+02 0.0045 27.2 9.7 52 179-233 31-85 (311)
196 3qze_A DHDPS, dihydrodipicolin 43.2 1E+02 0.0036 27.9 9.0 108 115-231 43-156 (314)
197 1i60_A IOLI protein; beta barr 43.1 93 0.0032 26.9 8.6 22 210-231 83-105 (278)
198 1tqj_A Ribulose-phosphate 3-ep 43.0 1.3E+02 0.0045 25.7 9.3 35 287-322 88-122 (230)
199 3noy_A 4-hydroxy-3-methylbut-2 42.8 2.1E+02 0.0071 26.5 12.4 94 119-233 49-142 (366)
200 3a5f_A Dihydrodipicolinate syn 42.6 87 0.003 28.0 8.3 109 114-231 20-134 (291)
201 4dpp_A DHDPS 2, dihydrodipicol 42.0 1.7E+02 0.006 27.1 10.3 105 115-230 79-189 (360)
202 2r91_A 2-keto-3-deoxy-(6-phosp 41.8 1.2E+02 0.0041 27.0 9.1 51 179-232 22-72 (286)
203 2ehh_A DHDPS, dihydrodipicolin 41.8 75 0.0026 28.5 7.7 51 179-232 24-77 (294)
204 1w3i_A EDA, 2-keto-3-deoxy glu 41.3 78 0.0027 28.4 7.8 52 179-233 23-74 (293)
205 2nuw_A 2-keto-3-deoxygluconate 41.2 1E+02 0.0034 27.6 8.5 51 179-232 23-73 (288)
206 3lmz_A Putative sugar isomeras 41.0 1.7E+02 0.0058 25.0 11.9 105 117-233 31-135 (257)
207 3fkr_A L-2-keto-3-deoxyarabona 40.5 1.4E+02 0.0047 27.0 9.4 107 115-230 28-143 (309)
208 4e38_A Keto-hydroxyglutarate-a 40.4 78 0.0027 27.5 7.2 94 116-236 46-139 (232)
209 3p6l_A Sugar phosphate isomera 39.8 1.8E+02 0.0061 24.9 11.9 105 117-233 23-137 (262)
210 3e96_A Dihydrodipicolinate syn 39.7 56 0.0019 29.8 6.6 51 179-232 36-89 (316)
211 3s5o_A 4-hydroxy-2-oxoglutarat 39.7 2.1E+02 0.0072 25.7 11.0 114 114-231 33-149 (307)
212 3fok_A Uncharacterized protein 39.2 30 0.001 31.4 4.5 48 181-230 133-182 (307)
213 3dz1_A Dihydrodipicolinate syn 39.0 89 0.0031 28.3 7.8 52 179-233 32-85 (313)
214 4hb7_A Dihydropteroate synthas 38.7 2.1E+02 0.0071 25.4 11.6 66 178-244 32-101 (270)
215 3dz1_A Dihydrodipicolinate syn 38.2 1.9E+02 0.0063 26.2 9.9 109 115-230 28-140 (313)
216 3ewb_X 2-isopropylmalate synth 38.1 2.2E+02 0.0074 25.5 10.2 51 179-235 153-208 (293)
217 3hbl_A Pyruvate carboxylase; T 38.1 1.9E+02 0.0066 31.5 11.4 52 179-236 695-747 (1150)
218 3qxb_A Putative xylose isomera 38.0 2.1E+02 0.0073 25.3 10.6 116 182-322 41-182 (316)
219 2bdq_A Copper homeostasis prot 37.3 79 0.0027 27.3 6.6 48 178-231 78-125 (224)
220 1ub3_A Aldolase protein; schif 35.9 56 0.0019 28.1 5.6 116 99-228 5-124 (220)
221 2zds_A Putative DNA-binding pr 35.7 2.2E+02 0.0076 25.3 10.2 47 179-228 18-68 (340)
222 2r91_A 2-keto-3-deoxy-(6-phosp 35.5 2.4E+02 0.008 25.0 11.7 108 116-231 19-129 (286)
223 3ble_A Citramalate synthase fr 35.2 84 0.0029 28.9 7.1 51 179-235 172-224 (337)
224 3epo_A Thiamine biosynthesis p 34.9 1E+02 0.0034 30.3 7.5 53 267-327 354-421 (612)
225 3eb2_A Putative dihydrodipicol 34.9 1.2E+02 0.0039 27.4 7.8 109 115-231 24-137 (300)
226 2yb1_A Amidohydrolase; HET: AM 34.4 34 0.0012 30.8 4.1 36 100-137 3-38 (292)
227 3cny_A Inositol catabolism pro 33.5 2.4E+02 0.0082 24.5 9.9 21 211-231 90-111 (301)
228 1i4n_A Indole-3-glycerol phosp 33.5 99 0.0034 27.1 6.9 51 181-239 115-165 (251)
229 2nuw_A 2-keto-3-deoxygluconate 33.4 2.6E+02 0.0088 24.8 13.3 109 115-231 19-130 (288)
230 3tsm_A IGPS, indole-3-glycerol 33.1 93 0.0032 27.7 6.7 103 119-239 82-184 (272)
231 2d73_A Alpha-glucosidase SUSB; 32.9 49 0.0017 34.0 5.3 52 180-231 453-508 (738)
232 1f6k_A N-acetylneuraminate lya 32.8 1.4E+02 0.0048 26.7 8.0 52 179-233 27-82 (293)
233 2ztj_A Homocitrate synthase; ( 32.8 2.5E+02 0.0085 26.2 10.0 50 180-236 149-201 (382)
234 4a29_A Engineered retro-aldol 32.6 89 0.0031 27.5 6.3 54 181-242 118-171 (258)
235 3kws_A Putative sugar isomeras 32.6 1.6E+02 0.0054 25.7 8.4 86 211-320 104-200 (287)
236 2anu_A Hypothetical protein TM 32.1 36 0.0012 29.8 3.8 34 100-135 21-54 (255)
237 2hk0_A D-psicose 3-epimerase; 30.8 2.2E+02 0.0076 25.1 9.2 85 211-320 107-205 (309)
238 1ydo_A HMG-COA lyase; TIM-barr 30.2 82 0.0028 28.6 6.0 51 179-235 160-212 (307)
239 3qc0_A Sugar isomerase; TIM ba 30.2 1.4E+02 0.0047 25.7 7.5 43 180-230 22-64 (275)
240 1w3i_A EDA, 2-keto-3-deoxy glu 30.2 2.9E+02 0.01 24.5 12.7 109 115-231 19-130 (293)
241 1twd_A Copper homeostasis prot 30.1 1E+02 0.0035 27.1 6.3 103 120-231 12-122 (256)
242 3ivs_A Homocitrate synthase, m 30.1 3.6E+02 0.012 25.5 11.0 52 179-236 183-235 (423)
243 4djd_D C/Fe-SP, corrinoid/iron 29.8 3.2E+02 0.011 24.9 10.8 116 180-313 84-206 (323)
244 3rmj_A 2-isopropylmalate synth 29.7 3.1E+02 0.011 25.4 10.0 52 179-236 160-216 (370)
245 1ydn_A Hydroxymethylglutaryl-C 29.5 3E+02 0.01 24.4 10.6 109 119-234 82-209 (295)
246 3u0h_A Xylose isomerase domain 29.2 1.5E+02 0.0051 25.6 7.6 14 346-359 227-240 (281)
247 3mn5_S Protein spire, actin, a 29.0 36 0.0012 19.6 2.0 23 339-361 5-28 (38)
248 2qf7_A Pyruvate carboxylase pr 28.6 2.4E+02 0.0082 30.8 10.2 52 179-236 712-764 (1165)
249 1gvf_A Tagatose-bisphosphate a 28.6 2.9E+02 0.01 24.6 9.2 65 300-373 116-184 (286)
250 2ki0_A DS119; beta-alpha-beta, 28.5 39 0.0013 18.9 2.1 21 209-229 13-33 (36)
251 2cw6_A Hydroxymethylglutaryl-C 28.4 88 0.003 28.1 5.9 51 179-235 159-211 (298)
252 2gjx_A Beta-hexosaminidase alp 28.2 88 0.003 30.6 6.2 82 207-324 158-241 (507)
253 3qfe_A Putative dihydrodipicol 28.0 2E+02 0.0069 26.0 8.3 108 115-230 31-145 (318)
254 3qxb_A Putative xylose isomera 27.6 2E+02 0.0067 25.6 8.2 87 211-321 114-216 (316)
255 3iv3_A Tagatose 1,6-diphosphat 27.1 98 0.0034 28.4 5.9 50 181-231 115-167 (332)
256 1o12_A N-acetylglucosamine-6-p 27.0 27 0.00094 32.5 2.2 44 271-324 172-220 (376)
257 3ayv_A Putative uncharacterize 27.0 2.7E+02 0.0093 23.5 8.8 87 211-321 76-165 (254)
258 3lab_A Putative KDPG (2-keto-3 27.0 2.9E+02 0.01 23.5 9.8 95 115-236 24-124 (217)
259 1jak_A Beta-N-acetylhexosamini 26.8 1.1E+02 0.0036 30.1 6.4 86 207-324 170-257 (512)
260 3gh5_A HEX1, beta-hexosaminida 26.3 1E+02 0.0035 30.3 6.2 86 207-324 195-282 (525)
261 2ojp_A DHDPS, dihydrodipicolin 26.2 3.4E+02 0.012 24.0 9.8 51 180-233 26-79 (292)
262 4af0_A Inosine-5'-monophosphat 26.2 4.2E+02 0.014 26.1 10.4 52 179-230 333-390 (556)
263 1to3_A Putative aldolase YIHT; 26.0 76 0.0026 28.8 4.9 51 180-231 112-162 (304)
264 3ngf_A AP endonuclease, family 25.7 2.3E+02 0.0078 24.4 8.1 22 211-232 131-152 (269)
265 3nav_A Tryptophan synthase alp 25.1 3.5E+02 0.012 23.8 10.7 46 175-224 33-78 (271)
266 3ozo_A N-acetylglucosaminidase 24.8 79 0.0027 31.5 5.1 81 207-324 200-282 (572)
267 3ovp_A Ribulose-phosphate 3-ep 24.2 3.3E+02 0.011 23.2 10.8 36 287-322 87-122 (228)
268 3rcn_A Beta-N-acetylhexosamini 23.7 2.2E+02 0.0075 28.1 8.1 98 207-324 151-250 (543)
269 1now_A Beta-hexosaminidase bet 23.7 1.9E+02 0.0064 28.3 7.6 81 207-324 164-246 (507)
270 1pii_A N-(5'phosphoribosyl)ant 23.6 1.6E+02 0.0056 28.2 7.0 53 181-241 122-174 (452)
271 1yx1_A Hypothetical protein PA 23.6 1.6E+02 0.0055 25.3 6.6 73 211-319 84-164 (264)
272 2a3l_A AMP deaminase, AMPD; at 23.6 42 0.0014 34.4 2.9 18 354-371 584-601 (701)
273 3k13_A 5-methyltetrahydrofolat 23.4 4E+02 0.014 23.9 10.1 98 178-295 39-141 (300)
274 2hmc_A AGR_L_411P, dihydrodipi 22.8 4.4E+02 0.015 24.1 11.2 107 115-230 46-157 (344)
275 3ipw_A Hydrolase TATD family p 22.8 4.3E+02 0.015 23.9 9.5 111 180-308 56-189 (325)
276 3dx5_A Uncharacterized protein 22.5 2.9E+02 0.0098 23.8 8.2 113 117-232 16-144 (286)
277 3tha_A Tryptophan synthase alp 22.0 2.1E+02 0.0073 25.0 6.9 122 176-321 28-150 (252)
278 3qja_A IGPS, indole-3-glycerol 22.0 2E+02 0.0069 25.4 6.9 51 181-239 127-177 (272)
279 1yht_A DSPB; beta barrel, hydr 22.0 1.4E+02 0.0047 27.8 6.0 29 207-235 29-58 (367)
280 2q02_A Putative cytoplasmic pr 22.0 3.6E+02 0.012 22.8 9.7 115 117-233 20-142 (272)
281 3glc_A Aldolase LSRF; TIM barr 21.9 92 0.0031 28.1 4.6 49 180-230 129-177 (295)
282 2dfa_A Hypothetical UPF0271 pr 21.7 4E+02 0.014 23.2 9.6 29 208-236 40-68 (250)
283 1xw8_A UPF0271 protein YBGL; N 21.6 4E+02 0.014 23.2 12.0 30 208-237 35-64 (252)
284 3obe_A Sugar phosphate isomera 21.4 4.2E+02 0.014 23.3 13.0 117 179-322 39-173 (305)
285 3qc0_A Sugar isomerase; TIM ba 21.0 3.6E+02 0.012 22.8 8.5 24 210-233 122-145 (275)
286 1v6t_A Hypothetical UPF0271 pr 20.9 4.2E+02 0.014 23.1 9.6 29 208-236 40-68 (255)
287 3ngf_A AP endonuclease, family 20.5 4E+02 0.014 22.7 11.0 113 178-321 25-153 (269)
288 3inp_A D-ribulose-phosphate 3- 20.5 4.2E+02 0.014 22.9 10.3 36 287-322 109-144 (246)
289 1xla_A D-xylose isomerase; iso 20.3 4.9E+02 0.017 24.0 9.7 122 179-321 36-183 (394)
290 3a24_A Alpha-galactosidase; gl 20.0 96 0.0033 31.3 4.6 109 116-231 309-425 (641)
291 3vni_A Xylose isomerase domain 20.0 2.6E+02 0.0089 24.2 7.4 85 211-321 88-187 (294)
No 1
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.3e-58 Score=464.76 Aligned_cols=347 Identities=24% Similarity=0.331 Sum_probs=301.8
Q ss_pred cceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCC--CCccchHH
Q 015110 43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGFPS 120 (413)
Q Consensus 43 ~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~--~~~e~~~~ 120 (413)
++++|+|++|+++++..+++|+|+||+|++|++... +.++||++|++|+|||||+|+|+..++. ..++++..
T Consensus 1 m~~~i~~~~v~~~~~~~~~~v~I~~G~I~~i~~~~~------~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~ 74 (490)
T 3dc8_A 1 MSTVIKGGTIVTADLTYKADVKVEGGRIVEIGPNLS------GAETLDATGCYVMPGGIDPHTHLEMPFMGTYSSDDFES 74 (490)
T ss_dssp -CEEEESCEEECSSCEEECEEEEETTEEEEEESSCC------CSEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHH
T ss_pred CcEEEEccEEECCCCceeeeEEEECCEEEEeccCCC------CCeEEECCCCEEecCEEeeccccCCCCCCCCCHHHHHH
Confidence 368999999999988788999999999999987532 4689999999999999999999988765 57889999
Q ss_pred HHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHH-HcCCcEEEEeecC
Q 015110 121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL-NAGVLGLKSFMCP 199 (413)
Q Consensus 121 ~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~~~ik~~~~~ 199 (413)
.++.++++||||+++|+ ++.|.....+.++.+.+.+. ...+++.+++.+.....+.++++.++. +.|+.++|.|+.+
T Consensus 75 ~~~aa~~~GvTtv~~~~-~~~p~~~~~~~~~~~~~~a~-~~~~d~~~~~~~~~~~~~~l~el~~l~~~~G~~~~k~~~~~ 152 (490)
T 3dc8_A 75 GTRAALAGGTTMVVDFA-LPSPGQSLLEALTMWDNKST-RANCDYSFHMAITWWGEQVFNEMETIVKDKGINTFKHFMAY 152 (490)
T ss_dssp HHHHHHHTTEEEEEEEE-CCC-CCCHHHHHHHHHHHTT-TCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESCS
T ss_pred HHHHHHHcCEEeecccC-CCCCCcCHHHHHHHHHHHhh-cccceeeeEEEEecCcHHHHHHHHHHHHhCCCCEEEEEecC
Confidence 99999999999999998 66676666777877776665 677899888777665555678888888 8999999999876
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhch---hhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHH
Q 015110 200 SGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE---RHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVA 276 (413)
Q Consensus 200 ~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a 276 (413)
.+ .+.+++++++++++.|+++|+++++|+|+.+.+. ..++.. +..+...|+.++|+.+|..++.+.+.++
T Consensus 153 ~~---~~~~~~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~----g~~~~~~~~~~rP~~~E~~av~r~i~la 225 (490)
T 3dc8_A 153 KG---ALMVDDDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAE----GNSGPEAHAYSRPAEVEGEAANRAIMIA 225 (490)
T ss_dssp TT---TTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHT----TCCSHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred CC---CccCCHHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhc----CCCCccccccCCCHHHHHHHHHHHHHHH
Confidence 42 3456999999999999999999999999987654 333332 3445566788999999999999999999
Q ss_pred hhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCCC----CcceEEcCCCCChhcHHH
Q 015110 277 KDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG----DTRFKCAPPIRDAANKEK 352 (413)
Q Consensus 277 ~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~----~~~~k~~Pplr~~~~~~~ 352 (413)
+.+ |+++|++|+|+. +++++|+.+|++|+.|++|+|||||+++++++... ++.+||+||||+++++++
T Consensus 226 ~~~-------g~~lhi~HvSt~-~~~~li~~ak~~G~~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d~~a 297 (490)
T 3dc8_A 226 DMA-------GCPVYIVHTSCE-QAHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDS 297 (490)
T ss_dssp HHH-------TCCEEESSCCSH-HHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGGHHH
T ss_pred HHh-------CCcEEEEeCCCH-HHHHHHHHHHHCCCeEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCChHHHHH
Confidence 986 899999999999 99999999999999999999999999999988766 688999999999999999
Q ss_pred HHHHHhcCCccEEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHhhhccccCCCCC
Q 015110 353 LWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNME 413 (413)
Q Consensus 353 L~~~l~~G~i~~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~~ 413 (413)
||++|++|.+|+|+|||+||+.++|..+.++|..+++|++|+|+.+|++| ++||++|+|+
T Consensus 298 L~~~l~~G~id~i~sDh~p~~~~~K~~g~~~f~~~~~G~~gle~~l~~~~-~~~v~~~~l~ 357 (490)
T 3dc8_A 298 LWAGLASGSLQVVATDHCAFTTEQKRFGVGDFTRIPNGTGGLEDRMPMLW-TYGVATGRIT 357 (490)
T ss_dssp HHHHHHHTSSCCCBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHH-HHHTTTTSSC
T ss_pred HHHHHhcCCceEEECCCCCCCHHHhhccCCChhhCCCChHHHHHHHHHHH-HHHHHcCCCC
Confidence 99999999999999999999999997666789999999999999999999 5789988874
No 2
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=100.00 E-value=8.2e-55 Score=436.98 Aligned_cols=352 Identities=26% Similarity=0.378 Sum_probs=299.1
Q ss_pred ceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCC--CCCCccchHHH
Q 015110 44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP--GRTEWEGFPSG 121 (413)
Q Consensus 44 ~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~--~~~~~e~~~~~ 121 (413)
+++|+|++|+++++..+++|+|+||+|++|++.... ++.++||++|++|+|||||+|+|+..+ +....+++...
T Consensus 2 ~~~i~n~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~----~~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~ 77 (461)
T 3sfw_A 2 KKWIRNGTVVTASDTYQADVLIDGEKVVAIGSDLQA----TDAEVIDATGYYLLPGGIDPHTHLDMPFGGTVTSDNFFTG 77 (461)
T ss_dssp EEEEESCEEECSSCEEECEEEEETTEEEEEESCCCC----SSCEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHHH
T ss_pred cEEEECeEEECCCCcEEEEEEEECCEEEEEeCCCCC----CCCeEEECCCCEEEeeeEEeEeccCcCCCCcccHhHHHHH
Confidence 689999999998887889999999999999986532 367899999999999999999999875 44567888899
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHH-cCCcEEEEeecCC
Q 015110 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLN-AGVLGLKSFMCPS 200 (413)
Q Consensus 122 ~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~G~~~ik~~~~~~ 200 (413)
++.++++||||+++++ ++.+.....+.++...+.......++++++..+.....+.+++++++++ .|+.++|.++.+.
T Consensus 78 ~~~~~~~GvTt~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~ik~~~~~~ 156 (461)
T 3sfw_A 78 TKAAAFGGTTSIVDFC-LTSKGESLHSAIATWHEKARGKAVIDYGFHLMVSDANDHVLEELESVVNNEGITSLKVFMAYK 156 (461)
T ss_dssp HHHHHHTTEEEEEEEE-CCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSCCCHHHHHHHHHHHHTSCCCEEEEESSST
T ss_pred HHHHHhCCEEEEEccC-CCCCcchHHHHHHHHHHHhhcCcEEEEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 9999999999999998 6666666677787777776667788888887666555667889999999 9999999998764
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcc
Q 015110 201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTR 280 (413)
Q Consensus 201 ~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~ 280 (413)
+ .+..+.+++.++++.|+++|+++.+|+++...+........ +.+..+...|...+|..+|..++.+++.+++.+
T Consensus 157 ~---~~~~~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~-~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~- 231 (461)
T 3sfw_A 157 N---VLMADDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQAL-AEGNTDPIYHAYTRPPEAEGEATGRAIALTALA- 231 (461)
T ss_dssp T---TTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHH-HTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHT-
T ss_pred C---CcccCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHH-hcCCCChhHhcccCCHHHHHHHHHHHHHHHHHh-
Confidence 2 34678999999999999999999999999887553221111 223445566778999999999999999999975
Q ss_pred cCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCC---CCcceEEcCCCCChhcHHHHHHHH
Q 015110 281 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKEKLWEAL 357 (413)
Q Consensus 281 ~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~---~~~~~k~~Pplr~~~~~~~L~~~l 357 (413)
++++|++|+|+. +++++|+.+|++|+.|++++|||||+++++++.. .++.++++||||+++++++||+++
T Consensus 232 ------g~~~hi~H~s~~-~~l~~i~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~Pplr~~~~~~aL~~~l 304 (461)
T 3sfw_A 232 ------DAQLYVVHVSCA-DAVRRIAEAREKGWNVYGETCPQYLVLDITALEKPDFEGAKYVWSPPLREKWNQDVLWSAL 304 (461)
T ss_dssp ------TCEEEECSCCSH-HHHHHHHHHHHTTCEEEEEECHHHHHCCGGGGGCTTTGGGGGCCSSCCCCTHHHHHHHHHH
T ss_pred ------CCCEEEEecCcH-HHHHHHHHHHhcCCcEEEeeccceEEEcHHHhcCccccCCcEEEcCCCCChHHHHHHHHHH
Confidence 899999999999 9999999999999999999999999999988754 478899999999999999999999
Q ss_pred hcCCccEEcCCCCCCCh-hhhccCCCCccccCCCcchHhHHHHHHhhhccccCCCCC
Q 015110 358 MDGHIDMLSSDHSPTVP-ELKLLDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNME 413 (413)
Q Consensus 358 ~~G~i~~i~sDh~p~~~-~~k~~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~~ 413 (413)
++|.+++|+|||+||+. ++|..+.++|..+++|++|+|+.+|+++ +++|++|++.
T Consensus 305 ~~G~~~~i~sD~~p~~~~~~k~~~~~~~~~~~~G~~g~e~~~~~~~-~~~~~~~~~~ 360 (461)
T 3sfw_A 305 KNGILQTVGSDHCPFNFSGQKELGRRDFTKIPNGGPIIEDRMTILF-SEGVRKGKIS 360 (461)
T ss_dssp HTTSSCEECCCBCCCCTTTTGGGGTTCGGGSCCCBCCTTTHHHHHH-HHTTTTTSSC
T ss_pred hcCCceEEECCCCCCCchhhhhcccCCHhhCCCCCccHHHHHHHHH-HHHHHcCCCC
Confidence 99999999999999984 4453334679999999999999999998 5788888763
No 3
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=100.00 E-value=6.8e-55 Score=438.18 Aligned_cols=347 Identities=37% Similarity=0.652 Sum_probs=288.9
Q ss_pred cceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCCccchHHHH
Q 015110 43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGT 122 (413)
Q Consensus 43 ~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~ 122 (413)
++++|+|++|+++++..+++|+|+||||++|++.... ..++||++|++|+|||||+|+|+..++...++++...+
T Consensus 23 ~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~-----~~~~id~~g~~v~PG~iD~H~H~~~~g~~~~~~~~~~~ 97 (473)
T 3e74_A 23 FDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGD-----AKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGT 97 (473)
T ss_dssp EEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCC-----EEEEEECTTCEEEECEEEEEECC---------CHHHHH
T ss_pred CCEEEEeeEEECCCCceeeeEEEECCEEEEEcCCCCC-----CCcEEECCCCEEecCEEEEecccCCCCCCcHHHHHHHH
Confidence 5789999999999887789999999999999976432 25799999999999999999999988888888999999
Q ss_pred HHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHHcCCcEEEEeecCCCC
Q 015110 123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGI 202 (413)
Q Consensus 123 ~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~ 202 (413)
+.++++||||+++|++++.|.....+.+....+.+.....+++.++.+....+ .++++++.+.|+.++|+|+.+++.
T Consensus 98 ~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~---~~~l~~l~~~G~~~~K~~~~~~~~ 174 (473)
T 3e74_A 98 RAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYN---IDRLHELDEVGVVGFKCFVATCGD 174 (473)
T ss_dssp HHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCSSEEEECEECCTTC---TTTHHHHHHHTCSCEEEEC-----
T ss_pred HHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCeEEEEEEeecccch---HHHHHHHHHcCCCEEEEeccccCC
Confidence 99999999999999967778777888888888877777788998887665433 556788888999999999875321
Q ss_pred ----CCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhch---hhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHH
Q 015110 203 ----NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE---RHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTV 275 (413)
Q Consensus 203 ----~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~ 275 (413)
+..+..+++.++++++.|+++|+++.+|+++...+. ...... +..+...+...+|+.+|..++.+++.+
T Consensus 175 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~----g~~~~~~~~~~~p~~~e~~av~~~l~l 250 (473)
T 3e74_A 175 RGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKRE----GRVTAHDYVASRPVFTEVEAIRRVLYL 250 (473)
T ss_dssp -------CCCCHHHHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHHHH----TCCSHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred cccccccCCCCHHHHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHHhc----CCcChhhcccCCCHHHHHHHHHHHHHH
Confidence 234457899999999999999999999999876543 222222 344556677899999999999999999
Q ss_pred HhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHH
Q 015110 276 AKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWE 355 (413)
Q Consensus 276 a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~ 355 (413)
++++ ++++|++|+|+. +++++++.+|++|+.|++++|||||+++++++...++.++++||||+++++++||+
T Consensus 251 a~~~-------g~~lhi~Hvst~-~~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~ 322 (473)
T 3e74_A 251 AKVA-------GCRLHVCHVSSP-EGVEEVTRARQEGQDITCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWE 322 (473)
T ss_dssp HHHH-------TCCEEECSCCSH-HHHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHHHCGGGCCSSCCCCHHHHHHHHH
T ss_pred HHHh-------CCcEEEEeCCCH-HHHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhCCCCcEEEeCCCCCHHHHHHHHH
Confidence 9986 899999999999 99999999999999999999999999999887666888999999999999999999
Q ss_pred HHhcCCccEEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHhhhccccCCCCC
Q 015110 356 ALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNME 413 (413)
Q Consensus 356 ~l~~G~i~~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~~ 413 (413)
++++|++++|+|||+||+.++|. .+|+.+++|++|+|+.+|++| +++|.+++++
T Consensus 323 ~l~~G~~~~i~tDh~p~~~~~k~---~~f~~~~~G~~g~e~~l~~~~-~~~~~~~~~~ 376 (473)
T 3e74_A 323 KLFNGEIDCLVSDHSPCPPEMKA---GNIMKAWGGIAGLQSCMDVMF-DEAVQKRGMS 376 (473)
T ss_dssp HHHTTCCCEECCCBCCCCTTTTC---SCTTTSCCCBCCGGGHHHHHH-HHHTTTTCCC
T ss_pred HHhCCCCcEEEeCCCCCCHHHcc---cChhhcCCCcccHHhHHHHHH-HHHHHcCCCC
Confidence 99999999999999999988884 479999999999999999998 4688887764
No 4
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.1e-52 Score=417.10 Aligned_cols=342 Identities=25% Similarity=0.377 Sum_probs=288.1
Q ss_pred eEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCCccchHHHHHH
Q 015110 45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKA 124 (413)
Q Consensus 45 lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~ 124 (413)
++|+|++|++.....+++|+|+||+|++|++....+ ++.++||++|++|+|||||+|+|+..++....+++...++.
T Consensus 2 ~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~---~~~~~id~~g~~v~PG~iD~H~H~~~~g~~~~~~~~~~~~~ 78 (424)
T 3gri_A 2 KLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPS---NGVDIIDAKGHFVSPGFVDVHVHLREPGGEYKETIETGTKA 78 (424)
T ss_dssp EEEESCEEEETTEEEECEEEEETTEEEEEESCCCCC---SSCEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHHHHHH
T ss_pred EEEEeeEEEcCCCceeeeEEEECCEEEEecCCCCCC---CCCeEEECCCCEEEeCeEEeeecCCCCCCCCHHHHHHHHHH
Confidence 789999999943345899999999999999865422 36789999999999999999999998888888899999999
Q ss_pred HHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCC-chhhHHHHHHHHHcCCcEEEEeecCCCCC
Q 015110 125 AAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMCPSGIN 203 (413)
Q Consensus 125 al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~G~~~ik~~~~~~~~~ 203 (413)
++++||||+++++ ++.|.....+.++...+.+......++.+++.+... ..+.++++.++.+.|+.+++..
T Consensus 79 ~~~~G~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~~~~~~~------- 150 (424)
T 3gri_A 79 AARGGFTTVCPMP-NTRPVPDSVEHFEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPALVKEGAFAFTDD------- 150 (424)
T ss_dssp HHHTTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHCSSEECCCEESBGGGCSSSBCCHHHHHTTTCCCEEEC-------
T ss_pred HHhCCEEEEeECc-CCCCCCChHHHHHHHHHHhccCCCceEEEEEEEecCCCcchHHHHHHHHhcCcEEEecC-------
Confidence 9999999999999 667777777888877777665455566555544322 1234556788888898877431
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCC
Q 015110 204 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG 283 (413)
Q Consensus 204 ~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~ 283 (413)
..+..+.+.++++++.|+++|+++++|+++...+..... +.+......+..++|..+|..++.+.+.+++.+
T Consensus 151 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~----~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~---- 222 (424)
T 3gri_A 151 GVGVQTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGAM----HEGKRSKELGIPGIPNICESVQIARDVLLAEAA---- 222 (424)
T ss_dssp SSCCCSHHHHHHHHHHHHHHTCCEEECCCCGGGCTTCCE----ESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHH----
T ss_pred CcCcCCHHHHHHHHHHHHhcCCEEEEeCCCHHHHhhhhh----hcCccchhhCCCCCCHHHHHHHHHHHHHHHHHh----
Confidence 224568999999999999999999999999876543332 223445566788899999999999999999876
Q ss_pred CCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCcc
Q 015110 284 PAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID 363 (413)
Q Consensus 284 ~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~ 363 (413)
|+++|++|+|+. +++++++.+|++|+.|++++|||||+++.+.+...++.++++||||+++++++||+++++|.+|
T Consensus 223 ---g~~~~i~H~s~~-~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~ 298 (424)
T 3gri_A 223 ---GCHYHVCHVSTK-ESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTID 298 (424)
T ss_dssp ---TCCEEECSCCCH-HHHHHHHHHHHTTCCEEEEECHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHTTSSC
T ss_pred ---CCcEEEEeCCCH-HHHHHHHHHHHcCCCEEEEecHHHHhcCHHHHhCcCceEEEeCCCCCHHHHHHHHHHHhcCCce
Confidence 899999999999 9999999999999999999999999999998888889999999999999999999999999999
Q ss_pred EEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHhhhccccCCCCC
Q 015110 364 MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNME 413 (413)
Q Consensus 364 ~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~~ 413 (413)
+|+|||+||+.++|. .+|..+++|++|+|+.+|+++ .++|++|++.
T Consensus 299 ~igtDhap~~~~~k~---~~~~~~~~G~~g~e~~~~~~~-~~~~~~~~~~ 344 (424)
T 3gri_A 299 CIATDHAPHARDEKA---QPMEKAPFGIVGSETAFPLLY-THFVKNGDWT 344 (424)
T ss_dssp EECCCBCCCCHHHHT---SCTTTSCCCCCCTTTHHHHHH-HHHTTTSSCC
T ss_pred EEEcCCCCCCHHHcc---CCHhHCCCCCccccccHHHHH-HHHHHcCCCC
Confidence 999999999998885 468899999999999999998 4788888763
No 5
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=100.00 E-value=2.4e-52 Score=417.64 Aligned_cols=349 Identities=38% Similarity=0.655 Sum_probs=297.5
Q ss_pred CcceEEEccEEEcCCCceeeEEEEECCEEEEccc--CCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCCccchH
Q 015110 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVS--EEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFP 119 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~--~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~ 119 (413)
+++++|+|++|+++++..+++|+|+||||++|++ .... ++.++||++|++|+|||||+|+|+..++....+++.
T Consensus 5 ~~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~----~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~ 80 (448)
T 3hm7_A 5 RFDLIIRSSTVVTETTTYRADVAIRNGIVSAITEPGSISS----DDGPAIDGTGLHLFPGMVDVHVHFNEPGRTEWEGFA 80 (448)
T ss_dssp CCSEEEEEEEEECSSCEEEEEEEEETTEEEEEESTTCSCT----TSSCEEECTTCEEEECEEEEEECCCTTTSGGGCCSH
T ss_pred cccEEEEeeEEECCCCceEeEEEEECCEEEEeeCccCCCC----CCCeEEECCCCEEecCEEEeeeccCCCCCCcHhHHH
Confidence 3589999999999988778999999999999998 3321 367899999999999999999999988776678888
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHHcCCcEEEEeecC
Q 015110 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCP 199 (413)
Q Consensus 120 ~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~ 199 (413)
...+.++++||||++++++++.|.....+.+....+.+.....+++.++.+..+.. .++++++.+.|+.++|.++.+
T Consensus 81 ~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~l~~~g~~~~~~~l~~ 157 (448)
T 3hm7_A 81 SGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPGN---IDHLQDLHDGGVIGFKAFMSE 157 (448)
T ss_dssp HHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEECCTTC---GGGHHHHHHTTCSEEEEESSS
T ss_pred HHHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEEEEEEecccC---HHHHHHHHHcCCCEEEEeecc
Confidence 89999999999999999866667777788888777666555667888877665433 556777888999999998877
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchh---hHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHH
Q 015110 200 SGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER---HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVA 276 (413)
Q Consensus 200 ~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a 276 (413)
...+..+..+.+.+.++++.|+++|+++.+|+++...+.. ..... +..+...++.++|..+|..++.+++.++
T Consensus 158 ~~~~~~~~~~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~p~~~e~~av~~~~~la 233 (448)
T 3hm7_A 158 CGTDDFQFSHDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEE----QRLTVKDYSEARPIVSELEAVERILRFA 233 (448)
T ss_dssp CSSSSSCCCCHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHT----TCCSHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred ccCCccCcCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhc----CCcChhhccccCCHHHHHHHHHHHHHHH
Confidence 5433334568999999999999999999999999876542 33333 3455667788999999999999999999
Q ss_pred hhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHH
Q 015110 277 KDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEA 356 (413)
Q Consensus 277 ~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~ 356 (413)
+++ |+++|++|+++. +++++++++|++|+.|++++|||||.++.+.+...++.++++||||+++++++||++
T Consensus 234 ~~~-------g~~~~i~H~s~~-~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~ 305 (448)
T 3hm7_A 234 QLT-------CCPIHICHVSSR-KVLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDG 305 (448)
T ss_dssp HHH-------TCCEEECCCCCH-HHHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHHHCSTTCCSSCCCCHHHHHHHHHH
T ss_pred HHh-------CCCEEEEeCCCH-HHHHHHHHHHhcCCCEEEEechHHHccCHHHhcCCCCeEEEcCCCCCHHHHHHHHHH
Confidence 976 899999999999 999999999999999999999999999988776668899999999999999999999
Q ss_pred HhcCCccEEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHhhhccccCCCC
Q 015110 357 LMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNM 412 (413)
Q Consensus 357 l~~G~i~~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~ 412 (413)
+++|.+++++|||+|++..+|..+ +|..+++|++|+|+.+|+++ +++|+.+++
T Consensus 306 l~~g~~~~i~tD~~p~~~~~k~~~--~~~~~~~G~~g~e~~l~~~~-~~~~~~~~l 358 (448)
T 3hm7_A 306 LMAGEIDLISSDHSPSLPQMKTGK--TIFEVWGGIAGCQNTLAVML-TEGYHKRKM 358 (448)
T ss_dssp HHHTCCCEECCCBCCCCGGGGCCS--STTTSCCCBCCTTTHHHHHH-HHTTTTTCC
T ss_pred HhcCCccEEEeCCCCCCHHHcccC--CHhhCCCCCccHHHHHHHHH-HHHHhcCCc
Confidence 999999999999999998888532 58889999999999999998 568877765
No 6
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=100.00 E-value=8e-51 Score=415.83 Aligned_cols=351 Identities=24% Similarity=0.362 Sum_probs=277.9
Q ss_pred CCcceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCC---CCCccc
Q 015110 41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG---RTEWEG 117 (413)
Q Consensus 41 ~~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~---~~~~e~ 117 (413)
|+++++|+|++|+++++..+++|+|+||||++|++....+ .+.++||++|++|+|||||+|+|+.++. ....++
T Consensus 1 ~~m~~li~n~~vv~~~~~~~~~v~I~~g~I~~Ig~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~e~ 77 (559)
T 2fty_A 1 PIYDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPS---LGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDT 77 (559)
T ss_dssp CCEEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCGG---GEEEEEECTTCEEEECEEECCBCCCCTTCTTSCCSCC
T ss_pred CCceEEEECcEEEcCCCceeeeEEEECCEEEEecCCCCCC---CCCeEEeCCCCEEEcCEEeeccCcCccccccCCCHHH
Confidence 3568999999999998777899999999999998754211 2457999999999999999999998763 346678
Q ss_pred hHHHHHHHHhCCceEEEeCCCCCC---CCCC-cHHHHHHHHHHHhc-CCeeeEEeeceecCC---chh---hH-HHHHHH
Q 015110 118 FPSGTKAAAAGGITTLIDMPLNSD---PSTI-STETLKLKVDAAEK-RIYVDVGFWGGLVPE---NAY---NA-SALEAL 185 (413)
Q Consensus 118 ~~~~~~~al~~GvTTv~d~~~~~~---~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~---~~-~~l~~l 185 (413)
++..++.++++||||+++|+ +.. +... ..+.+...++.... +..+++.++...... ..+ .+ ++++++
T Consensus 78 ~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~l~~~~~~l 156 (559)
T 2fty_A 78 MEHATRSAVAGGTTTVVAFS-TQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAA 156 (559)
T ss_dssp HHHHHHHHHHTTEEEEEEEE-ECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEEEEEECCCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcEEEEEECc-CcccCCcchHHHHHHHHHHHHHHHhhcceeEEEeeeeeccCcCCCchhhhhHHHHHHHH
Confidence 88899999999999999998 443 2222 23333111122222 356777776544332 223 45 677777
Q ss_pred H-HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhh---HhhccCcCCccccccCCCCCc
Q 015110 186 L-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERH---VKLEDDTLDTRSYSTYLKTRP 261 (413)
Q Consensus 186 ~-~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p 261 (413)
+ +.|+.++|+++.+.+ ..++.+++++++++|+++|+++++|+++...+... +.+. +..+...|..++|
T Consensus 157 ~~~~G~~~iki~~~~~~----~~~s~e~l~~~~~~A~~~g~~v~~H~e~~~~i~~~~~~~~~~----G~~~~~~~~~~~p 228 (559)
T 2fty_A 157 YNDYGVSSVKMFMTYPG----LQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQ----GLTDAYYHGVSRP 228 (559)
T ss_dssp HHHHCCCEEEEESSSTT----TBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHT----TCCSTTHHHHTSC
T ss_pred HHHCCCCEEEEEecCCC----CcCCHHHHHHHHHHHHhCCCEEEEECCChHHHHHHHHHHHhc----CCCChhhcccCCC
Confidence 7 679999999987642 36799999999999999999999999988765432 2222 3344455667899
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccC----------
Q 015110 262 PSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEI---------- 331 (413)
Q Consensus 262 ~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~---------- 331 (413)
..+|..++.+++.+++.+ ++++|++|+++. +++++|+.+|++|+.|++++|||||+++.+.+
T Consensus 229 ~~~E~~av~~~i~la~~~-------g~~vhi~H~s~~-~~~~~i~~ak~~G~~Vt~e~~p~~l~l~~~~~~~~~~~~~~~ 300 (559)
T 2fty_A 229 SIVEGEATNRAITLATTM-------DTPILFVHVSSP-QAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHHGEVES 300 (559)
T ss_dssp HHHHHHHHHHHHHHHHHT-------TCCEEECSCCCH-HHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGSCC-------
T ss_pred HHHHHHHHHHHHHHHHHh-------CCCEEEEcCCCH-HHHHHHHHHHHcCCceEEeecCcccccCHHHhhccccccccc
Confidence 999999999999999875 899999999998 89999999999999999999999999987665
Q ss_pred -------------------CC-CCcceEEcCCCCChhcHHHHHHHHhcCCccEEcCCCCCCChhhh-------------c
Q 015110 332 -------------------PD-GDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK-------------L 378 (413)
Q Consensus 332 -------------------~~-~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p~~~~~k-------------~ 378 (413)
+. .++.++++||||+++++++||+++++|++++|+|||+|++.+.| .
T Consensus 301 ~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~PplR~~~~~~~l~~~l~~G~~~~igTD~~p~~~~~k~~~~~k~~~~~~~~ 380 (559)
T 2fty_A 301 YGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPEN 380 (559)
T ss_dssp -CCSCCGGGCSSSTTTCTTCTTGGGGGCCSSCCCCTTSHHHHHHHHHTTSCSEECCCBCCCBSSCCSSTTBGGGGEEGGG
T ss_pred cccccCccccccccccccCccccccCcEECCCCCCHHHHHHHHHHHhcCceEEEEeCCCCCChhhccccccccccccccc
Confidence 11 35778999999999999999999999999999999999987643 2
Q ss_pred cCCCCccccCCCcchHhHHHHHHhhhccccCCCC
Q 015110 379 LDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNM 412 (413)
Q Consensus 379 ~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~ 412 (413)
.+..+|+.+++|++|+|+.+|++| +++|++|+|
T Consensus 381 ~~~~~f~~~~~G~~g~e~~l~~ll-~~~v~~~~l 413 (559)
T 2fty_A 381 NKNGEFRYIPNGLPGVCTRMPLLY-DYGYLRGNL 413 (559)
T ss_dssp TEESCGGGSCCCBCCTTTHHHHHH-HHTTTTTSS
T ss_pred cccCCHhhCCCCCccHHHHHHHHH-HHHHHcCCC
Confidence 112478899999999999999998 578988876
No 7
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=100.00 E-value=1.5e-50 Score=402.31 Aligned_cols=342 Identities=26% Similarity=0.441 Sum_probs=285.4
Q ss_pred cceEEEccEEEcCCC-ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCCccchHHH
Q 015110 43 NQYWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG 121 (413)
Q Consensus 43 ~~lli~n~~vi~~~~-~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~ 121 (413)
++++|+|++|++..+ ..+++|+|+||||++|++.... ++.++||++|++|+|||||+|+|+..++....+++...
T Consensus 1 m~~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~~~~----~~~~~id~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~ 76 (428)
T 3mpg_A 1 MNYLFKNGRYMNEEGKIVATDLLVQDGKIAKVAENITA----DNAEVIDVNGKLIAPGLVDVHVHLREPGGEHKETIETG 76 (428)
T ss_dssp CEEEEEEEEEECSSSCEEEEEEEEESSBEEECCSSCCC----TTSEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHHH
T ss_pred CcEEEEeeEEEeCCCCeeeeeEEEECCEEEEecCCCCC----CCCeEEECCCCEEeeCEEEEeeccCCCCCCchhHHHHH
Confidence 378999999997554 4589999999999999976432 36789999999999999999999998877778889999
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCC-chhhHHHHHHHHHcCCcEEEEeecCC
Q 015110 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMCPS 200 (413)
Q Consensus 122 ~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~G~~~ik~~~~~~ 200 (413)
++.++++||||+++++ ++.|.....+.++...+........++..++.+... ..+.+.++.++.+.|+.++..
T Consensus 77 ~~~~~~~GvTt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~G~~~~~~----- 150 (428)
T 3mpg_A 77 TLAAAKGGFTTICAMP-NTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAITVRQAGSEMTDFETLKELGAFAFTD----- 150 (428)
T ss_dssp HHHHHHHTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHCSSEEEECEESBGGGCSSSBCCHHHHHHTTCCCEEC-----
T ss_pred HHHHHhCCeEEEEeCC-CCCCCCCcHHHHHHHHHHhcccCCcEEEEEeeEecCCCcchHHHHHHHHHhCCEEEEC-----
Confidence 9999999999999999 666777777777777766654445566555444322 122345677888889877732
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcc
Q 015110 201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTR 280 (413)
Q Consensus 201 ~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~ 280 (413)
...+..+.+.++++++.|+++|+++++|+++......... ..+......++.++|..+|..++.+.+.+++.+
T Consensus 151 --~~~~~~~~~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~~~----~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~- 223 (428)
T 3mpg_A 151 --DGVGVQDASMMLAAMKRAAKLNMAVVAHCEENTLINKGCV----HEGKFSEKHGLNGIPSVCESVHIARDILLAEAA- 223 (428)
T ss_dssp --TTSCCCCHHHHHHHHHHHHHTTCCEEECCCCGGGCTTCSE----ETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHH-
T ss_pred --CCcCCCCHHHHHHHHHHHHhcCCeEEEECCChhHhhhHHh----hcCccchhhCcCCCCHHHHHHHHHHHHHHHHHh-
Confidence 1224568999999999999999999999998876543332 223444566778899999999999999999875
Q ss_pred cCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcC
Q 015110 281 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG 360 (413)
Q Consensus 281 ~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G 360 (413)
++++|++|+|+. +++++++.+|++|+.|++++|||||.++++.+...++.++++||+|+++++++||+++++|
T Consensus 224 ------g~~~~i~H~s~~-~~~~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G 296 (428)
T 3mpg_A 224 ------DCHYHVCHVSTK-GSVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHEALIEGLLDG 296 (428)
T ss_dssp ------TCCEEECSCCCH-HHHHHHHHHHHTTCCEEECBCHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHHT
T ss_pred ------CCCEEEEeCCCH-HHHHHHHHHHhcCCCEEEEEchHHhEECHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHhCC
Confidence 899999999999 9999999999999999999999999999998888889999999999999999999999999
Q ss_pred CccEEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHhhhccccCCCC
Q 015110 361 HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNM 412 (413)
Q Consensus 361 ~i~~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~ 412 (413)
.+++++|||+||+.++|.. +|..+|+|++|+|+.+|+++ .++|+.|++
T Consensus 297 ~i~~i~tDh~p~~~~~k~~---~~~~~p~g~~g~e~~~~~~~-~~~~~~~~~ 344 (428)
T 3mpg_A 297 TIDMIATDHAPHTAEEKAQ---GIERAPFGITGFETAFPLLY-TNLVKKGII 344 (428)
T ss_dssp SSCCBCCCBCCCCTTGGGS---CTTTSCSCCCCTTTHHHHHH-HHTTTTTSS
T ss_pred CCcEEEcCCCCCCHHHccc---CHhhCCCCceehhhHHHHHH-HHHHHcCCC
Confidence 9999999999999888853 58899999999999999998 567887765
No 8
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=100.00 E-value=5.2e-48 Score=371.41 Aligned_cols=261 Identities=18% Similarity=0.201 Sum_probs=214.0
Q ss_pred CCCEEeeeeeecccccCCCCCCCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCe-eeEEeece
Q 015110 92 GEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY-VDVGFWGG 170 (413)
Q Consensus 92 ~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 170 (413)
.|++|+||+||+|+|+++ +. ......+++++||||+++|| |+.|+.++.+.++.+++.+..... ++|.++++
T Consensus 22 ~~~~vlPG~ID~HvHlre-G~-----~~~e~~aA~aGG~Ttvi~mP-nt~P~~~~~~~~~~~~~~a~~~~~~vd~~~~~~ 94 (359)
T 3pnu_A 22 SNAMKLKNPLDMHLHLRD-NQ-----MLELIAPLSARDFCAAVIMP-NLIPPLCNLEDLKAYKMRILKACKDENFTPLMT 94 (359)
T ss_dssp SCCEEEESCEEEEECCCS-HH-----HHHHHHHHHHTTCSEEEECC-CCSSCCCSHHHHHHHHHHHHHHHTTSCCEEEEE
T ss_pred CCcEEccCcEEccccCCC-CC-----cchhHHHHHhCCCcEEEECC-CCCCCCCcHHHHHHHHHHHhccCCCceEEEeee
Confidence 589999999999999997 43 24455688999999999999 999999999999988887766555 89999888
Q ss_pred --ecCCchhhHHHHHHHHHcCCcEEEEeecCCC-C--CCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhcc
Q 015110 171 --LVPENAYNASALEALLNAGVLGLKSFMCPSG-I--NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLED 245 (413)
Q Consensus 171 --~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~-~--~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~ 245 (413)
+++. ..+++.++.+. +.++|+|+.+.. . ++.+..+.+.+++++++++++|+++.+|+|+.+.+.
T Consensus 95 l~lt~~---~~~el~~l~~~-v~~~Kl~~aga~~~s~~~~~~~~~~~l~~~l~~~~~~g~~v~vHaEd~~~i~------- 163 (359)
T 3pnu_A 95 LFFKNY---DEKFLYSAKDE-IFGIKLYPAGITTNSNGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVM------- 163 (359)
T ss_dssp EECSCC---CHHHHHHHTTT-CSEEEECBTTSSSSCTTSBCCCCHHHHHHHHHHHHHTTCCEEECCCCSSCGG-------
T ss_pred eEecCC---CHHHHHHHHHh-hhehhheeCCCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEecCCchHhH-------
Confidence 6632 34677777777 889999986421 1 122344889999999999999999999999987521
Q ss_pred CcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccc
Q 015110 246 DTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLA 325 (413)
Q Consensus 246 ~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~ 325 (413)
.+|..++.+++.+++++ +|+|+||+|+|++ +++++|+++ .+||||+|||||+
T Consensus 164 -----------------~~E~~ai~r~~~la~~~------~g~~lhi~HvSt~-~~v~~I~~A----~~VtaEv~phhL~ 215 (359)
T 3pnu_A 164 -----------------DRESNFAKIYEKLAKHF------PRLKIVMEHITTK-TLCELLKDY----ENLYATITLHHLI 215 (359)
T ss_dssp -----------------GTTGGGHHHHHHHHHHC------TTSCEEECSCCSH-HHHHHHHHC----TTEEEEECSGGGT
T ss_pred -----------------HHHHHHHHHHHHHHHHc------CCCcEEEEecCcH-HHHHHHHhc----CCceEEEechhhE
Confidence 02456788899999752 5999999999999 999999998 6899999999999
Q ss_pred cccccCC--CCCcceEEcCCCCChhcHHHHHHHHhcCCcc-EEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHh
Q 015110 326 FSAEEIP--DGDTRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFF 402 (413)
Q Consensus 326 l~~~~~~--~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~-~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~ 402 (413)
|+++++. .+++.+||+||||+++||++||++|++|+|| +|+|||+||+.++|.. +| .++|+.++++.||++|
T Consensus 216 lt~~~~~~~~~~~~~k~~PPLR~~~dr~aL~~al~dG~id~~iaTDHaPh~~~eK~~---~~--g~~Gi~~~~~~L~l~~ 290 (359)
T 3pnu_A 216 ITLDDVIGGKMNPHLFCKPIAKRYEDKEALCELAFSGYEKVMFGSDSAPHPKDTKEC---CG--CAAGVFSAPVILPVLA 290 (359)
T ss_dssp CCHHHHHTSSCCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCBC---------C--CCSCBCCGGGHHHHHH
T ss_pred EcHHHhcCcCCCCceEEcCCCCCHHHHHHHHHHHhcCCCCEEEecCCCCCCHHHhCC---CC--CCCChhhHHHHHHHHH
Confidence 9998874 3588999999999999999999999999999 7999999999998853 23 5789999999999998
Q ss_pred h
Q 015110 403 L 403 (413)
Q Consensus 403 ~ 403 (413)
+
T Consensus 291 ~ 291 (359)
T 3pnu_A 291 E 291 (359)
T ss_dssp H
T ss_pred H
Confidence 4
No 9
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=6.1e-46 Score=377.82 Aligned_cols=356 Identities=20% Similarity=0.250 Sum_probs=276.4
Q ss_pred CCcceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCC--CCccch
Q 015110 41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGF 118 (413)
Q Consensus 41 ~~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~--~~~e~~ 118 (413)
++++++|+|++|+++++..+++|+|+||||++|++....+ .+.++||++|++|+|||||+|+|+..+.. ...+++
T Consensus 6 ~~~~~lI~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~---~~~~vIDa~G~~v~PGlID~H~H~~~~~~~~~~~e~~ 82 (521)
T 2ftw_A 6 QTGTILIKNGTVVNDDRYFKSDVLVENGIIKEISKNIEPK---EGIKVVDATDKLLLPGGIDTHTHFQLPFMGTVSVDDF 82 (521)
T ss_dssp -CCCEEEESCEEECSSCEEECEEEEETTEEEEEESCCCCC---SSCCEEECTTCEEEECEEEEEECTTCEETTEECSSCH
T ss_pred ccCCEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCC---CCCeEEECCCCEEecCEEeeecccCcCCCCccCHHHH
Confidence 3468999999999988777899999999999999754322 25689999999999999999999986532 246788
Q ss_pred HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHH-HcCCcEEEEee
Q 015110 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL-NAGVLGLKSFM 197 (413)
Q Consensus 119 ~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~~~ik~~~ 197 (413)
+..++.++++||||++++. ...+.....+.++.....+.....++++++...........+++++++ +.|+..+|.++
T Consensus 83 ~~~~~~a~~~G~Ttv~d~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~~l~~l~~~~G~~~~k~~~ 161 (521)
T 2ftw_A 83 DIGTQAAVAGGTTFIIDFV-IPTRGQSLLEAYDQWKKWADEKVNCDYSLHVAITWWSEQVSREMEILVKERGVNSFKCFM 161 (521)
T ss_dssp HHHHHHHHHTTEEEEEEEE-CCCTTCCHHHHHHHHHHHHHTTCSSEEEEEEECCSCCHHHHHHHHHHHHHSCCCEEEEES
T ss_pred HHHHHHHHhCCcceecCcC-CCCCCcCHHHHHHHHHHHhhcCceeeEeeEEeecCCChhHHHHHHHHHHhCCCCEEEEEe
Confidence 8889999999999999976 222223335555555444444556677776554333344556777777 47999999988
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHh
Q 015110 198 CPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAK 277 (413)
Q Consensus 198 ~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~ 277 (413)
.+.+ ...++.++++++++.|+++|+++++|+++...+...+.... +.+......|...+|+..|..++.+.+.+++
T Consensus 162 ~~~~---~~~~~~e~l~~~~~~A~~~g~~v~vH~e~~~~~~~~~~~l~-~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~ 237 (521)
T 2ftw_A 162 AYKN---SFMVTDQEMYHIFKRCKELGAIAQVHAENGDMVFEGQKKML-EMGITGPEGHELSRPEALEAEATNRAIVIAD 237 (521)
T ss_dssp SCTT---TTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHH-HTTCCSTHHHHHHSCTHHHHHHHHHHHHHHH
T ss_pred ccCC---CcCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH-HcCCCChhhccccCcHHHHHHHHHHHHHHHH
Confidence 6642 23578999999999999999999999998764332221111 1222222234456788888888889888887
Q ss_pred hcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCC----CCcceEEcCCCCC-hhcHHH
Q 015110 278 DTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD----GDTRFKCAPPIRD-AANKEK 352 (413)
Q Consensus 278 ~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~----~~~~~k~~Pplr~-~~~~~~ 352 (413)
.+ ++|+|++|+++. .++++|+.+|++|+.|++++||+||.++...+.. .+..++++||+|+ ++++++
T Consensus 238 ~~-------~~p~hi~h~ss~-~~~~~i~~~r~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~ 309 (521)
T 2ftw_A 238 SV-------CTPVYIVHVQSI-GAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGV 309 (521)
T ss_dssp HH-------TCCEEECSCCCH-HHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSSHHHHHTTCCSSCCCCCTTHHHH
T ss_pred Hh-------CCCEEEEecCcH-HHHHHHHHHHHcCCeEEEEEcchhhccCHHHhcCCCcccCcceEEcCCCCCChhhHHH
Confidence 65 899999999998 8899999999999999999999999988765532 2345789999998 789999
Q ss_pred HHHHHhcCCccEEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHhhhccccCCCCC
Q 015110 353 LWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNME 413 (413)
Q Consensus 353 L~~~l~~G~i~~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~~ 413 (413)
||+++.+|.+++++|||+||+..+|....++|..+|.|++|+|+.++++| +++|+.|+|.
T Consensus 310 l~~~l~~g~~~~~gsD~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~-~~~v~~~~l~ 369 (521)
T 2ftw_A 310 LMDYLARGDLDCVGTDNCTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVW-ENGVNTGKLT 369 (521)
T ss_dssp HHHHHHHTSSCCCBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHH-HHHTTTTSSC
T ss_pred HHHHhcCCCEEEEEeCCCCCCHHHhhcccCChhhCCCCCccHHHHHHHHH-HHHHhcCCCC
Confidence 99999999999999999999987776544678889999999999999998 5788888763
No 10
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=100.00 E-value=1.1e-45 Score=370.15 Aligned_cols=352 Identities=24% Similarity=0.322 Sum_probs=279.3
Q ss_pred ceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCC--CCCCccchHHH
Q 015110 44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP--GRTEWEGFPSG 121 (413)
Q Consensus 44 ~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~--~~~~~e~~~~~ 121 (413)
+++|+|++|+++++..+++|+|+||||++|++....+ ++.++||++|++|+|||||+|+|+..+ +...+++++..
T Consensus 1 ~~li~n~~vv~~~~~~~~~v~I~~g~I~~ig~~~~~~---~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~ 77 (458)
T 1gkp_A 1 PLLIKNGEIITADSRYKADIYAEGETITRIGQNLEAP---PGTEVIDATGKYVFPGFIDPHVHIYLPFMATFAKDTHETG 77 (458)
T ss_dssp CEEEESCEEEETTEEEECEEEESSSBCCEEESCCCCC---TTCEEEECTTSEEEECEEEEEECSSCEETTEECSCCHHHH
T ss_pred CEEEEeeEEECCCCceEeeEEEECCEEEEecCCCCCC---CCCeEEECCCCEEecCEEecccCCCcCCCCCcCHhHHHHH
Confidence 3689999999988766889999999999999754321 256899999999999999999999865 32356788888
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHHcCCcEEEEeecCCC
Q 015110 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 201 (413)
Q Consensus 122 ~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~ 201 (413)
++.++++||||+++++ +..+.....+.++...+.......++++++........+.+++++++++.|+..+|.++.+.+
T Consensus 78 ~~~~~~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 156 (458)
T 1gkp_A 78 SKAALMGGTTTYIEMC-CPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAVSKFDEKTEGQLREIVADGISSFKIFLSYKN 156 (458)
T ss_dssp HHHHHHTTEEEEEEEE-CCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECCCCCTTHHHHHHHHHHTTCCEEEEEECSTT
T ss_pred HHHHHhCCccEEEeCC-CCCCCCCHHHHHHHHHHHhccCceeeEEEEEeecCCchhhHHHHHHHHHhCCCEEEEEeccCC
Confidence 8999999999999987 443444455666666555555566777766544333344577888888899999998877642
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhccc
Q 015110 202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRT 281 (413)
Q Consensus 202 ~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~ 281 (413)
...++.++++++++.|+++|+++++|+|+...+........ +.+......|...+|..+|..++.+++.+++.+
T Consensus 157 ---~~~~~~~~l~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~-~~G~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-- 230 (458)
T 1gkp_A 157 ---FFGVDDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLL-SEGKTGPEWHEPSRPEAVEAEGTARFATFLETT-- 230 (458)
T ss_dssp ---TTBCCHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHH-HTTCCSGGGTTTTSCHHHHHHHHHHHHHHHHHH--
T ss_pred ---CcCCCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHH-hcCCCChhhccCcCCHHHHHHHHHHHHHHHHHh--
Confidence 23568899999999999999999999988766542221100 122334445667899999999999999988865
Q ss_pred CCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCC---CCcceEEcCCCCChhcHHHHHHHHh
Q 015110 282 DGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKEKLWEALM 358 (413)
Q Consensus 282 ~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~---~~~~~k~~Pplr~~~~~~~L~~~l~ 358 (413)
|.++|++|+++. ++++.++.+|++|+.|++++||||+.++.+.+.. .+..++++||+|.+.++++||++++
T Consensus 231 -----g~~~~~~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~p~r~~~~~~~l~~~~~ 304 (458)
T 1gkp_A 231 -----GATGYVVHLSCK-PALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGVEAMKYIMSPPLRDKRNQKVLWDALA 304 (458)
T ss_dssp -----TCEEEECSCCSH-HHHHHHHHHHHTTCCEEEEEEHHHHHCCGGGGGSCHHHHHTTCCSSCCCCTHHHHHHHHHHH
T ss_pred -----CCCEEEEeCCCH-HHHHHHHHHHHcCCeEEEEecccceeeCHHHhcccccCCcceEEeCCCCCHHHHHHHHHHHh
Confidence 899999999998 8899999999999999999999999998766532 1445678999999999999999999
Q ss_pred cCCccEEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHhhhccccCCCC
Q 015110 359 DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNM 412 (413)
Q Consensus 359 ~G~i~~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~ 412 (413)
+|.+++++|||+|++...|..+.++|..++.|++|+|..+++++ +++|+.|+|
T Consensus 305 ~G~~~~~gtD~~~~~~~~k~~~~~~~~~~~~g~~g~~~~l~~~~-~~~~~~~~l 357 (458)
T 1gkp_A 305 QGFIDTVGTDHCPFDTEQKLLGKEAFTAIPNGIPAIEDRVNLLY-TYGVSRGRL 357 (458)
T ss_dssp TTSSCEEECCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHH-HHHTTSSSC
T ss_pred cCCeeEEECCCCCCCHHHhhcccCChhhCCCCcccHHHHHHHHH-HHHHHcCCC
Confidence 99999999999999877775444578888999999999999998 567777765
No 11
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-45 Score=373.06 Aligned_cols=359 Identities=20% Similarity=0.245 Sum_probs=273.7
Q ss_pred CCcceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCCCC-CCCCcEEecCCCEEeeeeeecccccCCCCC--CCccc
Q 015110 41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRN-SKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEG 117 (413)
Q Consensus 41 ~~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~-~~~~~vID~~G~~vlPGlID~H~H~~~~~~--~~~e~ 117 (413)
++++++|+|++|++++...+++|+|+||||++|++....+.. .++.++||++|++|||||||+|+|+..+.. ...++
T Consensus 25 ~~~~~lI~ng~Vv~~~~~~~~dV~I~dGrI~~Ig~~~~~~~~~~~~~~vIDa~G~~V~PG~ID~H~Hl~~~~~~~~~~e~ 104 (541)
T 2vr2_A 25 APSRLLIRGGRVVNDDFSEVADVLVEDGVVRALGHDLLPPGGAPAGLRVLDAAGKLVLPGGIDTHTHMQFPFMGSRSIDD 104 (541)
T ss_dssp --CEEEEESCEEECSSCEEECEEEEETTEEEEEEC-----------CEEEECTTSEEEECEEEEEECTTCBCSSSBCSCC
T ss_pred ccCCEEEECcEEEcCCCceEeeEEEECCEEEEeccCCCCCcccccCceEEECCCCEEccCEEEecccCCCCCCCCcCHHH
Confidence 356899999999998876789999999999999975432110 012389999999999999999999987632 25678
Q ss_pred hHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHH-cCCcEEEEe
Q 015110 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLN-AGVLGLKSF 196 (413)
Q Consensus 118 ~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~G~~~ik~~ 196 (413)
++..++.++++||||++++. ...+.....+.++...........++++++...........++++++++ .|+..+|.+
T Consensus 105 ~~~~~~~al~~GvTtv~d~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~el~~l~~~~G~~~~k~~ 183 (541)
T 2vr2_A 105 FHQGTKAALSGGTTMIIDFA-IPQKGGSLIEAFETWRSWADPKVCCDYSLHVAVTWWSDQVKEEMKILVQDKGVNSFKMF 183 (541)
T ss_dssp TTHHHHHHHTTTEEEEEEEE-CCCTTCCHHHHHHHHHHHHTTTCSSEEEEEEEECSCSHHHHHHHHHHHHTSCCCEEEEE
T ss_pred HHHHHHHHHhCCeeeecccc-CCCCCCCHHHHHHHHHHHhccCceEEEeeeecccCCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 88889999999999999986 2222233455566555444444566777765443333445667777774 699999999
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHH
Q 015110 197 MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVA 276 (413)
Q Consensus 197 ~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a 276 (413)
+.+.+ ...++.++++++++.|+++|+++++|+|+...+...+.... +.+......+...+|+..|..++.+.+.++
T Consensus 184 ~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~-~~G~~~~~~h~~~~~~~~e~~a~~~~~~la 259 (541)
T 2vr2_A 184 MAYKD---LYMVTDLELYEAFSRCKEIGAIAQVHAENGDLIAEGAKKML-ALGITGPEGHELCRPEAVEAEATLRAITIA 259 (541)
T ss_dssp SSSTT---TTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHH-HTTCCSTHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred eccCC---ccCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH-HcCCCChhhccccchhHHHHHHHHHHHHHH
Confidence 87643 23568999999999999999999999998754332221110 112222223445678888888999999988
Q ss_pred hhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCC----CCcceEEcCCCCC-hhcHH
Q 015110 277 KDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD----GDTRFKCAPPIRD-AANKE 351 (413)
Q Consensus 277 ~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~----~~~~~k~~Pplr~-~~~~~ 351 (413)
+.+ ++++|+.|+++. ..+++|+.+|++|+.|+++++|+||.++...+.. .+..++++||||+ +++++
T Consensus 260 ~~~-------~~p~~~~h~ss~-~~~~~i~~ar~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~pplr~~~~~~~ 331 (541)
T 2vr2_A 260 SAV-------NCPLYIVHVMSK-SAAKVIADARRDGKVVYGEPIAASLGTDGTHYWNKEWHHAAHHVMGPPLRPDPSTPD 331 (541)
T ss_dssp HHH-------TCCEEEEEECCH-HHHHHHHHHHHTTCCEEEEEBHHHHHCCSGGGGCSSHHHHHTTCCSSCCCSCTTHHH
T ss_pred HHh-------CCCEEEEeCCCH-HHHHHHHHHHHcCCeEEEEeehhhhcCCHHHhcCccccccCceEECCCCCCCcchHH
Confidence 875 899999999998 8899999999999999999999999888765422 1345689999998 78999
Q ss_pred HHHHHHhcCCccEEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHhhhccccCCCCC
Q 015110 352 KLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNME 413 (413)
Q Consensus 352 ~L~~~l~~G~i~~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~~ 413 (413)
+||+++++|.+++++|||+||+..+|....++|..+|.|++|+|+.++++| +++|+.|+|.
T Consensus 332 ~l~~~l~~g~~~~~gtD~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~-~~~v~~~~l~ 392 (541)
T 2vr2_A 332 FLMNLLANDDLTTTGTDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIW-EKGVHSGKMD 392 (541)
T ss_dssp HHHHHHHTTSSCCCBCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHH-HHHTTTTSSC
T ss_pred HHHHHHhcCCeEEEEeCCCCCChHHhcccCCChhhCCCCCccHHHHHHHHH-HHHHHcCCCC
Confidence 999999999999999999999988886555689999999999999999998 5789888763
No 12
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=4.3e-44 Score=358.47 Aligned_cols=351 Identities=28% Similarity=0.462 Sum_probs=275.2
Q ss_pred CcceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCC-CCCccchHH
Q 015110 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG-RTEWEGFPS 120 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~-~~~~e~~~~ 120 (413)
|++++|+|++|+++++..+++|+|+||||++|++....+ ++.++||++|++|+|||||+|+|+..++ +...+++..
T Consensus 1 m~~~li~~~~v~~~~~~~~~~v~I~~g~I~~ig~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~~~ 77 (458)
T 1gkr_A 1 MFDVIVKNCRLVSSDGITEADILVKDGKVAAISADTSDV---EASRTIDAGGKFVMPGVVDEHVHIIDMDLKNRYGRFEL 77 (458)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEETTEEEEEESCCTTC---CEEEEEECTTCEEEECEEEEEEECCCGGGTTTSCCHHH
T ss_pred CceEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCC---CCCeEEeCCCCEEecCEEEeeecccCCCCCCchhHHHH
Confidence 357899999999987767889999999999998753211 2457999999999999999999998765 555678888
Q ss_pred HHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHHcCCcEEEEeecCC
Q 015110 121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPS 200 (413)
Q Consensus 121 ~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~ 200 (413)
.++.++++||||++++++++.|.....+.+...++...... ++++++.+... +..++++++++.|+.++|+++.++
T Consensus 78 ~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~g~~~i~~~~~~~ 153 (458)
T 1gkr_A 78 DSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLK-VDFALYGGGVP---GNLPEIRKMHDAGAVGFKSMMAAS 153 (458)
T ss_dssp HHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCS-SEEEEEEECCT---TCHHHHHHHHHTTCCEEEEESSCS
T ss_pred HHHHHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCc-eeEEEEeccCC---CCHHHHHHHHHcCCcEEEEeeccc
Confidence 89999999999999997434454455677777666665555 67766554332 235678888888999999988764
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhh---HhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHh
Q 015110 201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERH---VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAK 277 (413)
Q Consensus 201 ~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~ 277 (413)
.....+..+.++++++++.|+++|+++.+|+++...+... +... +......|...+|..+|...+.+++.+++
T Consensus 154 ~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~----G~~~~~~h~~~~~~~~~~~~~~~~~~la~ 229 (458)
T 1gkr_A 154 VPGMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAA----GGKDMAAYEASQPVFQENEAIQRALLLQK 229 (458)
T ss_dssp BTTTBCBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHT----TCCSHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHhhc----CccchhhccccCCHHHHHHHHHHHHHHHH
Confidence 2111245789999999999999999999999887654321 1111 11122234455688888889999999988
Q ss_pred hcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHH
Q 015110 278 DTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEAL 357 (413)
Q Consensus 278 ~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l 357 (413)
+. |+++|++|+++. ..++.++.+|+.|+++++++||||+.++.+.+...++.++++||+|...+++.+|+++
T Consensus 230 ~~-------g~~~h~~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~l~~~~ 301 (458)
T 1gkr_A 230 EA-------GCRLIVLHVSNP-DGVELIHQAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPPVRSAEMNIRLWEQL 301 (458)
T ss_dssp HH-------CCEEEECCCCSH-HHHHHHHHHHHTTCCEEEEECHHHHSCCGGGHHHHGGGGCCSSCCCCHHHHHHHHHHH
T ss_pred Hh-------CCCEEEEeCCCH-HHHHHHHHHHHCCCcEEEEEchHHheeCHHHhhccCceEEEcCCCCCHHHHHHHHHHH
Confidence 75 889999999998 8899999999999999999999999988765543456788999999999999999999
Q ss_pred hcCCccEEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHhhhccccCCCC
Q 015110 358 MDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNM 412 (413)
Q Consensus 358 ~~G~i~~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~ 412 (413)
++|.++++||||+|++...|..+..+|+..+.|++|.|+.++.++ .+.|+.++|
T Consensus 302 ~~G~~~~lgtD~~~~~~~~k~~g~~~~~~~~~~~~g~~~~l~~~~-~~~~~~~~l 355 (458)
T 1gkr_A 302 ENGLIDTLGSDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMML-TNGVNKGRL 355 (458)
T ss_dssp HHTCCCEECCCEECCCGGGTGGGGTCGGGSCCCBCCTTTHHHHHH-HHTGGGTSS
T ss_pred hCCCceEEEeCCCCCChHHhccccCCHhHCCCCcccHHHHHHHHH-HHHHHhCCC
Confidence 999999999999999877775322467778899999999999987 456666554
No 13
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=100.00 E-value=3.1e-43 Score=349.01 Aligned_cols=337 Identities=30% Similarity=0.408 Sum_probs=262.1
Q ss_pred eEEEccEEEcCCC-ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCCccchHHHHH
Q 015110 45 YWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTK 123 (413)
Q Consensus 45 lli~n~~vi~~~~-~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~ 123 (413)
++|+|++|+++.+ ..+++|+|+||||++|++. + +.++||++|++|+|||||+|+|+..++....+++...++
T Consensus 2 ~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~---~----~~~~id~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~ 74 (426)
T 2z00_A 2 ILIRNVRLVDARGERGPADVLIGEGRILSLEGG---E----AKQVVDGTGCFLAPGFLDLHAHLREPGEEVKEDLFSGLL 74 (426)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEETTEEEESBCC---C----CSEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHHHHH
T ss_pred EEEEeeEEECCCCceecceEEEECCEEEEEecC---C----CceEEeCCCCEEecCEEEeccccCCCCCCchHHHHHHHH
Confidence 6899999999875 3578999999999999864 1 457999999999999999999998876655678888899
Q ss_pred HHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCC-chhhHHHHHHHHHcCCcEEEEeecCCCC
Q 015110 124 AAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMCPSGI 202 (413)
Q Consensus 124 ~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~G~~~ik~~~~~~~~ 202 (413)
.++++||||+++++ ++.+.....+.++...+.....+.+++.+++++.+. ..+..++++++++.|+.+++.
T Consensus 75 ~~~~~GvTt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~i~~------- 146 (426)
T 2z00_A 75 AAVRGGYTDLVSMP-NTKPPVDTPEAVRALKEKAKALGLARLHPAAALTEKQEGKTLTPAGLLREAGAVLLTD------- 146 (426)
T ss_dssp HHHHTTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHTSSEECCEECSBGGGCSSSBCCHHHHHHHTCCEEEC-------
T ss_pred HHHhCCccEEEecC-CCCCCcChHHHHHHHHHHhcccCcccEEEEEEeecCCChhhHHHHHHHHHcCCEEEEC-------
Confidence 99999999999998 445544555666665555543332444333332221 112244566667678877753
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhh----
Q 015110 203 NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKD---- 278 (413)
Q Consensus 203 ~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~---- 278 (413)
+..+..+.+.++++++.|+++|+++.+|+++.........+ .+......+...+|..+|...+.++++++++
T Consensus 147 ~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~----~g~~~~~~g~~~~~~~~e~~~~~~~~~~a~~~~~~ 222 (426)
T 2z00_A 147 DGRTNEDAGVLAAGLLMAAPLGLPVAVHAEDAGLRRNGVMN----DGPLADLLGLPGNPPEAEAARIARDLEVLRYALRR 222 (426)
T ss_dssp TTSCCCCHHHHHHHHHHHGGGTCCEEECCCCHHHHTTCSEE----CSHHHHHHTCCEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHHHhhCCEEEEeCCCHHHHhhhhhc----cCccchhcccccCChHHHHHHHHHHHHHHhhcccc
Confidence 12235689999999999999999999999876643211111 1233445566778988898888888888875
Q ss_pred --cccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHH
Q 015110 279 --TRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEA 356 (413)
Q Consensus 279 --~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~ 356 (413)
. +.++|+.|+++. ++++++++++++|+.|++++||||++++.+.+...+..++++||+|+++++++||++
T Consensus 223 ~~~-------g~~~~i~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~plr~~~~~~~l~~~ 294 (426)
T 2z00_A 223 SPA-------TPRLHVQHLSTK-RGLELVREAKRAGLPVTAEATPHHLTLTEEALRTFDPLFKVAPPLRGEEDREALLEG 294 (426)
T ss_dssp CSS-------CCCEEETTCCCH-HHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGGGCCGGGCCSSCCCCHHHHHHHHHH
T ss_pred ccC-------CCcEEEEeCCCH-HHHHHHHHHHHcCCCEEEEEchHHhEeCHhHhhccCceEEEeCCCCCHHHHHHHHHH
Confidence 3 789999999998 889999999999999999999999998877665556778899999999999999999
Q ss_pred HhcCCccEEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHhhhccccCCCC
Q 015110 357 LMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNM 412 (413)
Q Consensus 357 l~~G~i~~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~ 412 (413)
+++|.+++++|||+|++..+|. ++|+.+|.|++++|+.+++++ ++.++.|+|
T Consensus 295 l~~G~~~~lgsD~~p~~~~~~~---~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l 346 (426)
T 2z00_A 295 LLDGTLDAIATDHAPHTLAEKE---KDLLRAPFGIPSLEVAFPLLY-TELHLKRGF 346 (426)
T ss_dssp HHHTSSCEECCCBCCCCTTGGG---SCTTTSCCCBCCTTTHHHHHH-HHTHHHHCC
T ss_pred HhCCCcEEEecCCCCCCHHHcc---CChhhCCCCcccHHHHHHHHH-HHHHHcCCC
Confidence 9999999999999999877663 468889999999999999987 345555554
No 14
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=100.00 E-value=1.1e-42 Score=352.57 Aligned_cols=355 Identities=21% Similarity=0.249 Sum_probs=270.2
Q ss_pred CCcceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCC--CCccch
Q 015110 41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGF 118 (413)
Q Consensus 41 ~~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~--~~~e~~ 118 (413)
++++++|+|++|+++++..+++|+|+||||++|++....+ ++.++||++|++|+|||||+|+|+..+.+ ...+++
T Consensus 24 ~~~~~li~n~~v~~~~~~~~~~V~I~~grI~~Ig~~~~~~---~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~e~~ 100 (501)
T 2vm8_A 24 TSDRLLIKGGKIVNDDQSFYADIYMEDGLIKQIGENLIVP---GGVKTIEAHSRMVIPGGIDVHTRFQMPDQGMTSADDF 100 (501)
T ss_dssp -CCCEEEEEEEEECSSCEEEEEEEEETTEEEEEESSCCCC---SSSCEEECTTCEEEECEEEEEECTTCEETTEECSSCH
T ss_pred CcCCEEEEeeEEECCCCceEeeEEEECCEEEEeccCCCCC---CCCeEEECCCCEEeeCEEEeeecccccccCCCcHHHH
Confidence 3468999999999988766899999999999999754321 25689999999999999999999986532 346788
Q ss_pred HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHH-HcCCcEEEEee
Q 015110 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL-NAGVLGLKSFM 197 (413)
Q Consensus 119 ~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~~~ik~~~ 197 (413)
+..+++++++||||+++++ ++.+.....+.++...+........+++++...........+++++++ +.|+.++|.++
T Consensus 101 ~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~l~~~~G~~~i~~~~ 179 (501)
T 2vm8_A 101 FQGTKAALAGGTTMIIDHV-VPEPGTSLLAAFDQWREWADSKSCCDYSLHVDISEWHKGIQEEMEALVKDHGVNSFLVYM 179 (501)
T ss_dssp HHHHHHHHHTTEEEEEEEE-CCCTTSCHHHHHHHHHHHHHHHCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEES
T ss_pred HHHHHHHHhCCcEEEEeCC-CCCCCCChHHHHHHHHHHHhcCCeeEEEEEEEecCCCcccHHHHHHHHHhCCceEEEEee
Confidence 8889999999999999997 444444445556655544433344566665433222233456677777 47999999987
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHh
Q 015110 198 CPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAK 277 (413)
Q Consensus 198 ~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~ 277 (413)
.+.. ....+.++++++++.|+++|+++.+|+++...+...+.... +.+......|...+|..+|..++.+.+.+++
T Consensus 180 ~~~~---~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~i~~~~~l~~ 255 (501)
T 2vm8_A 180 AFKD---RFQLTDCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRIL-DLGITGPEGHVLSRPEEVEAEAVNRAITIAN 255 (501)
T ss_dssp SSTT---TTBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHH-TTTCCSTHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred ccCC---CCCCCHHHHHHHHHHHHHhCCEEEEEccChHHHHHHHHHHH-hcCCCChhhccccCCHHHHHHHHHHHHHHHH
Confidence 6542 13568999999999999999999999998654332221111 1222333344456788888889999999998
Q ss_pred hcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCCC----CcceEEcCCCCCh-hcHHH
Q 015110 278 DTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG----DTRFKCAPPIRDA-ANKEK 352 (413)
Q Consensus 278 ~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~----~~~~k~~Pplr~~-~~~~~ 352 (413)
.+ |+++|++|+++. +++++|+.+|+.|+.|+++++|||++++...+... +..++++||+|.+ .++++
T Consensus 256 ~~-------g~~~hi~h~~~~-~~~~~i~~~~~~G~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~~ 327 (501)
T 2vm8_A 256 QT-------NCPLYITKVMSK-SSAEVIAQARKKGTVVYGEPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDF 327 (501)
T ss_dssp HH-------TCCEEEEEECCH-HHHHHHHHHHHTTCCEEEEEBHHHHHCCGGGGGCSSHHHHHHTCCSSCCCSCTTHHHH
T ss_pred Hh-------CCcEEEEeCCcH-HHHHHHHHHHhCCCcEEEEEChhHhhcChhhhcccccccCceEEECCCCCCCcchHHH
Confidence 65 899999999998 88999999999999999999999999987655321 2347789999987 68999
Q ss_pred HHHHHhcCCccEEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHhhhccccCCCC
Q 015110 353 LWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNM 412 (413)
Q Consensus 353 L~~~l~~G~i~~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~ 412 (413)
||+++++|.++++||||+|++...|....++|...+.|++|.|+.++.++ ...++.+++
T Consensus 328 l~~~l~~G~~~~~gtD~~~~~~~~~~~~~~~~~~~~~G~~g~e~~l~~~~-~~~~~~~~l 386 (501)
T 2vm8_A 328 LNSLLSCGDLQVTGSAHCTFNTAQKAVGKDNFTLIPEGTNGTEERMSVIW-DKAVVTGKM 386 (501)
T ss_dssp HHHHHHHTSSCCCBCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHH-HHHTTTTSS
T ss_pred HHHHHhcCceEEEEecCCCCChhhhhcccCChhhCCCCCccHHHHHHHHH-HHHHHcCCC
Confidence 99999999999999999999876664434567778999999999999987 456666554
No 15
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=100.00 E-value=4.5e-44 Score=345.40 Aligned_cols=268 Identities=17% Similarity=0.197 Sum_probs=214.6
Q ss_pred CCCEEeeeeeecccccCCCCCCCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCe--eeEEeec
Q 015110 92 GEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY--VDVGFWG 169 (413)
Q Consensus 92 ~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 169 (413)
++++|+||+||+|+|+++ +.. ....++++++||||+++|| |+.|...+.+.+..+.+.+..... +++.+++
T Consensus 4 ~~~~v~PG~ID~HvH~~~-g~~-----~~e~~aa~~gGvTtvv~mp-nt~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (347)
T 2z26_A 4 SQVLKIRRPDDWHLHLRD-GDM-----LKTVVPYTSEIYGRAIVMP-NLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLM 76 (347)
T ss_dssp CCEEEEECCCEEEECCCS-HHH-----HHHHHHHHHTTCSEEEECC-CCSSCCCSHHHHHHHHHHHHHTSCTTCCCEEEE
T ss_pred CCeEECCCcceeeecCCC-CCc-----hhhHHHHHhCCCCEEEECC-CCCCCCCCHHHHHHHHHHHhcccCCcccEEEEE
Confidence 467999999999999987 432 3456889999999999999 888888888888888777765433 3454445
Q ss_pred eecCCchhhHHHHHHHHHcCC-cEEEEeecCCCCC-CCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCc
Q 015110 170 GLVPENAYNASALEALLNAGV-LGLKSFMCPSGIN-DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDT 247 (413)
Q Consensus 170 ~~~~~~~~~~~~l~~l~~~G~-~~ik~~~~~~~~~-~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~ 247 (413)
++........+++.++.+.|+ .+||+|+++.+.+ +.+..+.+.++++++++++.|+++++|+|+.... .
T Consensus 77 ~~~~~~~~~~~ei~~l~~~G~~~g~K~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~vH~ed~~~~----~----- 147 (347)
T 2z26_A 77 TCYLTDSLDPNELERGFNEGVFTAAKLYPANATANSSHGVTSVDAIMPVLERMEKIGMPLLVHGEVTHAD----I----- 147 (347)
T ss_dssp EEECCTTCCHHHHHHHHHTTSEEEEEECCCCTTCCTTTCCSCGGGGHHHHHHHHHHTCCEEECCCCCCTT----S-----
T ss_pred EEEeCCCCCHHHHHHHHHCCCeEEEEEeecCCcCCCCCccCCHHHHHHHHHHHHHhCCEEEEEecCCccc----c-----
Confidence 542222223678888888998 8999999865321 2345678899999999999999999999986410 0
Q ss_pred CCccccccCCCCCchHHHHHHHHHHH--HHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccc
Q 015110 248 LDTRSYSTYLKTRPPSWEEAAIRELL--TVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLA 325 (413)
Q Consensus 248 ~~~~~~~~~~~~~p~~~E~~~v~~~~--~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~ 325 (413)
.+..+|..++.+.+ .+++. +|+|+|++|+|++ +++++|+++| .+|++|+|||||+
T Consensus 148 ------------~~~~~E~~~~~~~i~~~la~~-------~~~~~hi~Hvst~-~~~~~i~~ak---~~Vt~e~~ph~L~ 204 (347)
T 2z26_A 148 ------------DIFDREARFIESVMEPLRQRL-------TALKVVFEHITTK-DAADYVRDGN---ERLAATITPQHLM 204 (347)
T ss_dssp ------------CGGGHHHHHHHHTHHHHHHHS-------TTCCEEECSCCSH-HHHHHHHTSC---TTEEEEECHHHHH
T ss_pred ------------CHHHHHHHHHHHHHHHHHHhh-------cCCcEEEEECCcH-HHHHHHHHhC---CCceEeecchHhe
Confidence 01124666788877 56764 4999999999999 9999999886 4899999999999
Q ss_pred cccccCC--CCCcceEEcCCCCChhcHHHHHHHHhcCCcc-EEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHh
Q 015110 326 FSAEEIP--DGDTRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFF 402 (413)
Q Consensus 326 l~~~~~~--~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~-~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~ 402 (413)
|+++++. .+++.+||+||||++++|++||+++.+|.|| +|+|||+||+.++|.. +|. ++|+.|+|+++|++|
T Consensus 205 l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~~l~~G~id~~i~SDhaP~~~~~K~~---~~g--~~Gi~~~e~~l~l~~ 279 (347)
T 2z26_A 205 FNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKES---SCG--CAGCFNAPTALGSYA 279 (347)
T ss_dssp CCHHHHHTTSBCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCCHHHHSS---SSB--CCCCCCTTTHHHHHH
T ss_pred ecHHHhcCcCCCccEEEeCCCCCHHHHHHHHHHHhcCCCCeEEecCCCCCCHHHhcC---CCC--CCCcCcHHHHHHHHH
Confidence 9988774 3688999999999999999999999999999 7999999999888853 332 589999999999998
Q ss_pred h
Q 015110 403 L 403 (413)
Q Consensus 403 ~ 403 (413)
+
T Consensus 280 ~ 280 (347)
T 2z26_A 280 T 280 (347)
T ss_dssp H
T ss_pred H
Confidence 5
No 16
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=9.3e-43 Score=348.87 Aligned_cols=349 Identities=25% Similarity=0.362 Sum_probs=273.2
Q ss_pred ceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCC-CCCC-CccchHHH
Q 015110 44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDD-PGRT-EWEGFPSG 121 (413)
Q Consensus 44 ~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~-~~~~-~~e~~~~~ 121 (413)
+++|+|++|+++++..+++|+|+||||++|++... ++.++||++|++|+|||||+|+|+.. ++.. ..++++..
T Consensus 2 ~~li~n~~v~~~~~~~~~~v~I~~g~I~~ig~~~~-----~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~ 76 (457)
T 1nfg_A 2 DIIIKNGTIVTADGISRADLGIKDGKITQIGGALG-----PAERTIDAAGRYVFPGGIDVHTHVETVSFNTQSADTFATA 76 (457)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETTEEEEESSCCC-----CCSEEEECTTCEEEECEEEEEECCSCEETTEECSCCHHHH
T ss_pred cEEEEeeEEEeCCCceeeeEEEECCEEEEecCCCC-----CCCeEEeCCCCEEccceEeeccccccCcCCCCChhhHHHH
Confidence 68999999999877668899999999999987532 24689999999999999999999974 2322 46778888
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHHcCCcEEEEeecCCC
Q 015110 122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 201 (413)
Q Consensus 122 ~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~ 201 (413)
++.++++||||+++++ ++.|.....+.++...+.......++++++......+.+.+++++++.+.|+.++|.++.+..
T Consensus 77 ~~~~~~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~k~~~~~~~ 155 (457)
T 1nfg_A 77 TVAAACGGTTTIVDFC-QQDRGHSLAEAVAKWDGMAGGKSAIDYGYHIIVLDPTDSVIEELEVLPDLGITSFKVFMAYRG 155 (457)
T ss_dssp HHHHHHTTEEEEEEEE-ECCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSSCCHHHHHHTTTGGGGTCCEEEEESSSTT
T ss_pred HHHHHhCCcEEEEeCC-CCCCCCChHHHHHHHHHHhcccCccCEEEEEeecCCchhHHHHHHHHHHcCCCEEEEeeccCC
Confidence 9999999999999998 544555566777777666655566778777654444444455666667789999999876542
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhccc
Q 015110 202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRT 281 (413)
Q Consensus 202 ~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~ 281 (413)
....+.+++.++++.++++|+++.+|+++...+...+.... +.+......|...+|..+|.+.+.+++++++++
T Consensus 156 ---~~~~~~~~~~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~-~~g~~~~~~h~~~~~~~~~~~~~~~~~~~a~~~-- 229 (457)
T 1nfg_A 156 ---MNMIDDVTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKFV-AEGKTAPIYHALSRPPRVEAEATARALALAEIV-- 229 (457)
T ss_dssp ---TTBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHH-HTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHH--
T ss_pred ---CCCCCHHHHHHHHHHHHhcCCEEEEeCCCHHHHHHHHHHHH-hcCCcchhhccccCCHHHHHHHHHHHHHHHHHH--
Confidence 12357788999999999999999999998776543321100 112222233445678888999999999999876
Q ss_pred CCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCC---CCcceEEcCCCCChhcHHHHHHHHh
Q 015110 282 DGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKEKLWEALM 358 (413)
Q Consensus 282 ~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~---~~~~~k~~Pplr~~~~~~~L~~~l~ 358 (413)
|+++|++|+++. ++++.++.+|+.|..++++++||++.++.+.+.. .+..++++||+|....++.+|++++
T Consensus 230 -----g~~~~~~H~~~~-~~~~~~~~~~~~G~~v~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~~ 303 (457)
T 1nfg_A 230 -----NAPIYIVHVTCE-ESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDFEGAKYVFTPPARAKKDHDVLWNALR 303 (457)
T ss_dssp -----TCCEEECCCCSH-HHHHHHHHHHHHTCCEEECEEGGGGTCCGGGGGCTTTGGGGGCCSSCCCCHHHHHHHHHHHH
T ss_pred -----CCCEEEEeCCcH-HHHHHHHHHHHcCCeEEEEEchHHhEeCHHHhccccccCceeEEcCCCCCHHHHHHHHHHHh
Confidence 899999999998 8899999999999999999999999998776543 4667889999999999999999999
Q ss_pred cCCccEEcCCCCCCChh-hhccCCCCccccCCCcchHhHHHHHHhhhccccCCCC
Q 015110 359 DGHIDMLSSDHSPTVPE-LKLLDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNM 412 (413)
Q Consensus 359 ~G~i~~i~sDh~p~~~~-~k~~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~ 412 (413)
+|.++++||||+|++.. +|..+.++|..+++|++|.|..++.++ +.|+.++|
T Consensus 304 ~G~~~~~gtD~~~~~~~~~k~~~~~~~~~~~~g~~g~e~~~~~~~--~~~~~~~l 356 (457)
T 1nfg_A 304 NGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVY--QGVNEGRI 356 (457)
T ss_dssp TTCCSCEECCBCCCCTTTTTTTTTTCGGGSCCCBCCTTTHHHHHH--HHHHTTSS
T ss_pred CCCeEEEecCCCCCChHHhhhcccCCHhHCCCCcccHHHHHHHHH--HHHHcCCC
Confidence 99999999999998765 454323568888999999999999877 25555544
No 17
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=100.00 E-value=6e-42 Score=342.70 Aligned_cols=345 Identities=26% Similarity=0.323 Sum_probs=267.2
Q ss_pred CcceEEEccEEEcCCCceeeEEEEECCEEEEccc-CCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCCccchHH
Q 015110 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVS-EEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPS 120 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~-~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~ 120 (413)
|++++|+|++|+++++..+++|+|+||+|++|++ ........++.++||++|++|+|||||+|+|+..++..+.++++.
T Consensus 3 ~m~~li~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~e~~~~ 82 (452)
T 2gwn_A 3 AMKILLRNALITNEGKTFPGSVMIDGAFISRIIEGELPADDNLSADEVIECSGLRLFPGCIDDQVHFREPGLTHKATIAS 82 (452)
T ss_dssp CSEEEEEEEEEEETTEEEEEEEEEETTEEEEEEESCCCTTCCTTCSEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHH
T ss_pred cccEEEECeEEECCCceeeeeEEEECCEEEEEecCCCccccCCCCCeEEeCCCCEEecCEEeeccccCCCCCCcHHHHHH
Confidence 4578999999999876668899999999999987 432100012468999999999999999999999876666788888
Q ss_pred HHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHHcCCcEEEEeecCC
Q 015110 121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPS 200 (413)
Q Consensus 121 ~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~ 200 (413)
.++.++++||||+++++ ++.|.....+.+...++.+.....++++++.+..+.. .+++.++.+.|+.++|.++.+.
T Consensus 83 ~~~~~~~~GvTt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~g~~g~k~~~~~~ 158 (452)
T 2gwn_A 83 ESRAAVAGGVTSFMDMP-NTNPPTTMWERLLEKRQIGADTAWANYGFFFGGTNDN---IDEIKRVDKHLVPGLKLFLGSS 158 (452)
T ss_dssp HHHHHHHTTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHCSSEEEECEECCSSC---HHHHHTCCTTSCSCEEEESSSC
T ss_pred HHHHHHhCCeEEEEcCC-CCCCCCChHHHHHHHHHHhhccCcccEEEEEeecCCC---HHHHHHHHHcCCCEEEEEeccC
Confidence 99999999999999998 6666666777888777766666778888877665433 3456666667889999987653
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhH----hhccCcCCccccccCCCCCchHHHHHHHHHHHHHH
Q 015110 201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHV----KLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVA 276 (413)
Q Consensus 201 ~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~----~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a 276 (413)
.. ..+..+.+.++++++. .+.++..|+++.+.+...+ +..+ ...+...|...+|+.+|.+.++++++++
T Consensus 159 ~~-~~~~~~~~~~~~~~~~---~~~~~~~h~~~~~~~~~~~~~~~~~~G---~~~~~~~h~~~~~~~~~~~~l~~~~~la 231 (452)
T 2gwn_A 159 TG-NMLVDNKETLEKIFGE---CDLLIATHCEKEEIIRANKEHYKAKYG---NDLDIHFHPLIRSEEACYRSSAEAVELA 231 (452)
T ss_dssp CG-GGBCCCHHHHHHHHHH---CCSCEEEECCCHHHHHHHHHHHHHHHC---SCCCGGGHHHHSCHHHHHHHHHHHHHHH
T ss_pred CC-CcccCCHHHHHHHHHH---cCCEEEEcCCCHHHHHhHHhhhhhhcC---cccchhhccccCChHHHHHHHHHHHHHH
Confidence 21 1233466777766554 4888999999876654333 2111 0012233445678889999999999999
Q ss_pred hhcccCCCCCCceEEEEccCChhhHHHHHHH--H-HHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHH
Q 015110 277 KDTRTDGPAEGAHLHIVHLSDASSSLDLLME--A-KTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKL 353 (413)
Q Consensus 277 ~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~--a-k~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L 353 (413)
+++ |+++|+.|+++. +.++.+++ + +++ +|+++++||+++++++++...|..++++||+|...++..+
T Consensus 232 ~~~-------g~~v~i~H~~~~-~~~~~~~~~~a~~~~--~v~~~~~~h~~~l~~~~~~~~g~~~~~~P~lr~~~~~~~l 301 (452)
T 2gwn_A 232 ERM-------NARLHILHLSTE-KELSLFRNDIPTAQK--RITSEVCVHHLWFSDTDYGRLGNRIKWNPAIKKESDREAL 301 (452)
T ss_dssp HHH-------TCCEEECCCCCT-GGGGGSCCSSCGGGC--SEEEEEEHHHHHCCGGGHHHHGGGGCCSSCCCCHHHHHHH
T ss_pred HHh-------CCCEEEEeCCCH-HHHHHHHHhhcccCC--CeEEEEchHHhhcCHHHHhccCceEEECCCCCCHHHHHHH
Confidence 986 899999999987 78888877 3 554 6899999999999987664456788899999999999999
Q ss_pred HHHHhcCCccEEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHhhhccccCCCC
Q 015110 354 WEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNM 412 (413)
Q Consensus 354 ~~~l~~G~i~~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~ 412 (413)
|+++++|.++++||||+|++..+|. .+|+.+++|++|+|+.+++++. .+.++++
T Consensus 302 ~~~l~~Gv~~~lgTD~~~~~~~~k~---~~~~~~~~g~~~~e~~~~~~~~--~~~~~~l 355 (452)
T 2gwn_A 302 RAAVRNGRIDIIATDHAPHLLREKE---GSCLQAASGGPLVQHSLLALLE--LCNQGIF 355 (452)
T ss_dssp HHHHHHSSSCEEECCBCCCCHHHHC---SCTTTSCCCCCCTTTHHHHHHH--HHHTTSS
T ss_pred HHHHHCCCceEEEeCCCCCChHHhc---CChhhCCCCCccHHHHHHHHHH--HHHcCCC
Confidence 9999999999999999999877774 3688899999999999999874 4544443
No 18
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=100.00 E-value=5.3e-41 Score=337.25 Aligned_cols=343 Identities=25% Similarity=0.336 Sum_probs=225.8
Q ss_pred CCCCcceEEEccEEEcCCC--ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCCcc
Q 015110 39 LLPYNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWE 116 (413)
Q Consensus 39 ~~~~~~lli~n~~vi~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e 116 (413)
..+|++++|+|++|+++++ ..+++|+|+||+|++|++... + ++.++||++|++|+|||||+|+|+..++....+
T Consensus 43 ~~~mm~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~---~~~~~iD~~g~~v~PGlID~H~H~~~~~~~~~~ 118 (467)
T 1xrt_A 43 DRWMLKLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNIL-V---PEAEIIDAKGLIVCPGFIDIHVHLRDPGQTYKE 118 (467)
T ss_dssp ---CCEEEEESCEEEEGGGTEEEECEEEEETTEEEEEESSCC-C---SSEEEEECTTSEEEECEEEEEECCCTTTCTTTC
T ss_pred ccceeeEEEEeeEEECCCCCceecceEEEECCEEEEecCCCC-C---CCCcEEeCCCCEEccCEEEEeecccCCCCCchh
Confidence 4556789999999998765 357899999999999987532 1 245799999999999999999999876665667
Q ss_pred chHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCC-chhhHHHHHHHHHcCCcEEEE
Q 015110 117 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKS 195 (413)
Q Consensus 117 ~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~G~~~ik~ 195 (413)
++...++.++++||||+++++ ++.+.....+.++...+.....+.+++.+.+.+.+. ..+.+++++++++.|+.+++.
T Consensus 119 ~~~~~~~~~~~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~l~~~g~~~i~~ 197 (467)
T 1xrt_A 119 DIESGSRCAVAGGFTTIVCMP-NTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTITKGRKGKEIADFYSLKEAGCVAFTD 197 (467)
T ss_dssp CHHHHHHHHHHTTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHCSSEEEECBCSBGGGCSSSBCCHHHHHHHTCCCBCC
T ss_pred hHHHHHHHHHhCCeEEEEecC-CCCCCCChHHHHHHHHHHhcccCcceEEEEeeecCCCCcccHHHHHHHHHcCCEEEEc
Confidence 888889999999999999998 444544555666666555543333455444333221 112234566666667655432
Q ss_pred eecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHH
Q 015110 196 FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTV 275 (413)
Q Consensus 196 ~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~ 275 (413)
. ..+..+.++++++++.|+++|+++.+|+++.......+ .. +......+...+|...|...+.+.+.+
T Consensus 198 ----~---~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~~~~~l-~~----g~~~~~~g~~~~~~~~e~~~~~~~~~~ 265 (467)
T 1xrt_A 198 ----D---GSPVMDSSVMRKALELASQLGVPIMDHCEDDKLAYGVI-NE----GEVSALLGLSSRAPEAEEIQIARDGIL 265 (467)
T ss_dssp ----T---TSCCCCHHHHHHHHHHHHHHTCEEEECCCGGGGTC-------------------------CHHHHHHHHHHH
T ss_pred ----C---CCCCCCHHHHHHHHHHHHhcCCEEEEECCCHHHHHHHH-hc----CccchhcccccCChHHHHHHHHHHHHH
Confidence 1 12356899999999999999999999998765432111 11 111222334556666777778877777
Q ss_pred HhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHH
Q 015110 276 AKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWE 355 (413)
Q Consensus 276 a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~ 355 (413)
++.. +.++|+.|+++. +++++++.+|++|+.+++++||+|++++.+.+...++++++.||+|++.+++.||+
T Consensus 266 ~~~~-------g~~~hi~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~ 337 (467)
T 1xrt_A 266 AQRT-------GGHVHIQHVSTK-LSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLNSGANARVNPPLRKKEDRLALIE 337 (467)
T ss_dssp HHHH-------CCEEEESCCCSH-HHHHHHHHHHHTTCCEEEEECGGGGC----------------------CCHHHHHH
T ss_pred HHHh-------CCCEEEEeCCCH-HHHHHHHHHHhcCCcEEEeccHHHHhcCHhHhhccCceEEEcCCCCCHHHHHHHHH
Confidence 7654 899999999997 78999999999999999999999999987766555677899999999999999999
Q ss_pred HHhcCCccEEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHhhhccccCCCC
Q 015110 356 ALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFFLSRGLMGGNM 412 (413)
Q Consensus 356 ~l~~G~i~~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~~~~gv~~g~~ 412 (413)
++++|.++++||||.|++...|. .|...++|++|+|+.+++++ + .|+.|+|
T Consensus 338 ~l~~Gv~~~lgTD~~~~~~~~~~----~~~~~~~g~~g~e~~l~~~l-~-~~~~g~l 388 (467)
T 1xrt_A 338 GVKRGIIDCFATDHAPHQTFEKE----LVEFAMPGIIGLQTALPSAL-E-LYRKGII 388 (467)
T ss_dssp HHHHTCSCEECCCBCCCCC---------------CCCCGGGHHHHHH-H-HHHTTSS
T ss_pred HHhCCceEEEeeCCCCCChhHhc----ccccCCCCCccHHHHHHHHH-H-HHHcCCC
Confidence 99999999999999999876653 26678999999999999887 3 6666655
No 19
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=100.00 E-value=9.5e-35 Score=292.50 Aligned_cols=274 Identities=18% Similarity=0.194 Sum_probs=204.6
Q ss_pred CCcceEEEccEEEcCCC--ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCCccch
Q 015110 41 PYNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGF 118 (413)
Q Consensus 41 ~~~~lli~n~~vi~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~ 118 (413)
++++++|+|++|+|+++ ..+++|+|+||||++|++.... ++.++||++|++|+|||||+|+|+....+...
T Consensus 5 ~~~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~~----~~~~~id~~g~~v~PG~iD~H~H~~~~~~~~~--- 77 (480)
T 3gip_A 5 EKLDFKITGGWIIDGTGAPRRRADLGVRDGRIAAIGELGAH----PARHAWDASGKIVAPGFIDVHGHDDLMFVEKP--- 77 (480)
T ss_dssp CCEEEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTTS----CEEEEEECTTSEEEECEEESSCCCTTHHHHST---
T ss_pred ccCCEEEECcEEECCCCCeeeeeEEEEECCEEEEecCCCCC----CCCeEEECCCCEEccCEEeccccccccccCCh---
Confidence 34689999999999886 3689999999999999986422 36689999999999999999999865321111
Q ss_pred HHHHHHHHhCCceEEEeCCC--------CCCCCCCc---------HHHHHHHHHHHh-cCCeeeEEeeceec--------
Q 015110 119 PSGTKAAAAGGITTLIDMPL--------NSDPSTIS---------TETLKLKVDAAE-KRIYVDVGFWGGLV-------- 172 (413)
Q Consensus 119 ~~~~~~al~~GvTTv~d~~~--------~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~~-------- 172 (413)
....++++||||++++.| ++.+.... .+.+..+++... ....++++++.+..
T Consensus 78 --~~~~~~~~G~Tt~~~g~cG~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~g 155 (480)
T 3gip_A 78 --DLRWKTSQGITTVVVGNCGVSAAPAPLPGNTAAALALLGETPLFADVPAYFAALDAQRPMINVAALVGHANLRLAAMR 155 (480)
T ss_dssp --TCHHHHTTTEEEEEECCTTCCSCSCCCTTCCCGGGGGTCSSCCCSSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCS
T ss_pred --hHHHHhcCCeeEEEecCCCcCCCCCCcccchhhhhhhhccCccccCHHHHHHHHHhCCCCceEEEccccHHHHHHhcC
Confidence 124569999999999422 22222111 123555555543 34677888875432
Q ss_pred ----CCchhhHHHHHHHH----HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhc
Q 015110 173 ----PENAYNASALEALL----NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLE 244 (413)
Q Consensus 173 ----~~~~~~~~~l~~l~----~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~ 244 (413)
....+.++++++++ +.|+.+++.++.+.. ..+.+.+++.++++.++++|.++.+|+++...
T Consensus 156 ~~~~~~~~~~l~~m~~l~~~~~~~Ga~g~~~~~~y~p---~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~-------- 224 (480)
T 3gip_A 156 DPQAAPTAAEQQAMQDMLQAALEAGAVGFSTGLAYQP---GAVAQAAELEGLARVAAERRRLHTSHIRNEAD-------- 224 (480)
T ss_dssp STTSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSTT---GGGCCHHHHHHHHHHHHHTTCEEEEECSCSST--------
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHCCCcEEeecCccCC---cccCCHHHHHHHHHHHHHcCCEEEEEecCccc--------
Confidence 11233455565555 689999999876542 12458899999999999999999999987532
Q ss_pred cCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccC---------ChhhHHHHHHHHHHCCCCE
Q 015110 245 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS---------DASSSLDLLMEAKTNGDSI 315 (413)
Q Consensus 245 ~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s---------~~~~~~~~i~~ak~~G~~v 315 (413)
.+.+++.+++.+++++ |+++|++|++ +. +++++|+.+|++|++|
T Consensus 225 -------------------~~~~a~~e~i~la~~~-------g~~v~i~H~s~~~~~~~~~~~-~~l~~i~~a~~~G~~V 277 (480)
T 3gip_A 225 -------------------GVEAAVEEVLAIGRGT-------GCATVVSHHKCMMPQNWGRSR-ATLANIDRAREQGVEV 277 (480)
T ss_dssp -------------------THHHHHHHHHHHHHHH-------CCEEEETTCCCCSGGGTTTHH-HHHHHHHHHHHTTCCE
T ss_pred -------------------cHHHHHHHHHHHHHHh-------CCCEEEEEEeccCccchhhHH-HHHHHHHHHHHcCCce
Confidence 1356888999999875 8999999999 46 8999999999999999
Q ss_pred EEEccccccccccccCCCCCcceEEc-------CCCCC-----------hhcHHHHHHHHhcCC
Q 015110 316 TVETCPHYLAFSAEEIPDGDTRFKCA-------PPIRD-----------AANKEKLWEALMDGH 361 (413)
Q Consensus 316 ~~e~~p~~l~l~~~~~~~~~~~~k~~-------Pplr~-----------~~~~~~L~~~l~~G~ 361 (413)
++++||||+.++...+...+..+|++ ||++. ..+++++++.+.+|.
T Consensus 278 t~e~~p~~~~~t~~~l~~~~~~~~~~~~~~~~~p~~~g~~~~~ia~~~~~~~~~a~~~~l~~g~ 341 (480)
T 3gip_A 278 ALDIYPYPGSSTILIPERAETIDDIRITWSTPHPECSGEYLADIAARWGCDKTTAARRLAPAGA 341 (480)
T ss_dssp EEEECSCSCEEEECCGGGTTTSSCCEEEEESSCGGGTTCBHHHHHHHHTSCHHHHHHHHCSEEE
T ss_pred EEEeeccccCcchhhhcCHHHHHHHhhccccCCCccCCCcHHHHHHHcCCCHHHHHHHhccCCe
Confidence 99999999999887776667788888 99944 566788886655443
No 20
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=99.97 E-value=4.9e-30 Score=259.33 Aligned_cols=283 Identities=18% Similarity=0.190 Sum_probs=195.8
Q ss_pred cceEEEccEEEcCCC--ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCCccchHH
Q 015110 43 NQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPS 120 (413)
Q Consensus 43 ~~lli~n~~vi~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~ 120 (413)
++++|+|++|+++++ ..+++|+|+||||++|++... + ++.++||++|++|+|||||+|+|+..+... ..
T Consensus 21 ~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~---~~~~~iD~~g~~v~PG~iD~H~H~~~~~~~-----~~ 91 (496)
T 1rk6_A 21 FDYILSGGTVIDGTNAPGRLADVGVRGDRIAAVGDLSA-S---SARRRIDVAGKVVSPGFIDSHTHDDNYLLK-----HR 91 (496)
T ss_dssp BSEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-S---CBSCEEECTTCEEEECEEESSCCCTTHHHH-----CT
T ss_pred ccEEEECCEEEeCCCCceeccEEEEECCEEEEecCCCC-C---CCCeEEeCCCCEEecCEeeeeecCCccccc-----cH
Confidence 378999999999875 357899999999999987532 1 246799999999999999999999764321 12
Q ss_pred HHHHHHhCCceEEEeCCCC--CCCCC--C--------------cHHHHHHHHHHHhc-CCeeeEEeecee----------
Q 015110 121 GTKAAAAGGITTLIDMPLN--SDPST--I--------------STETLKLKVDAAEK-RIYVDVGFWGGL---------- 171 (413)
Q Consensus 121 ~~~~al~~GvTTv~d~~~~--~~~~~--~--------------~~~~~~~~~~~~~~-~~~~~~~~~~~~---------- 171 (413)
..+.++++||||+++|+++ ..|.. . ....+....+.... ...+++.++.+.
T Consensus 92 ~~~~~~~~G~Tt~~~~~~g~~~~p~~~~~l~~~i~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~~~~~~~ 171 (496)
T 1rk6_A 92 DMTPKISQGVTTVVTGNCGISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALRAAPPAVNAACMVGHSTLRAAVMPD 171 (496)
T ss_dssp TCHHHHTTTEEEEEESCTTCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCSC
T ss_pred HHHHHHcCCeEEEEeCCCCCCCCCCChHHHHHhhcccCcccccCccCHHHHHHHHhccCCccceEEecccccceeeeccc
Confidence 3578899999999999742 22221 0 01223333333332 334455443221
Q ss_pred cC--CchhhHHHHHHH----HHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhcc
Q 015110 172 VP--ENAYNASALEAL----LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLED 245 (413)
Q Consensus 172 ~~--~~~~~~~~l~~l----~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~ 245 (413)
.. ...+..++++++ .+.|+.+++.+..+.. ....+.+++.++++.++++|+++.+|+++...
T Consensus 172 ~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~---~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~--------- 239 (496)
T 1rk6_A 172 LRREATADEIQAMQALADDALASGAIGISTGAFYPP---AAHASTEEIIEVCRPLITHGGVYATHMRDEGE--------- 239 (496)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSGG---GTTCCHHHHHHHHTHHHHHTCEEEEECSCSST---------
T ss_pred cccCCCHHHHHHHHHHHHHHHHcCCcEEeeccccCC---CCCCCHHHHHHHHHHHHHcCCEEEEEeCCCcc---------
Confidence 00 112233444444 4689998876543211 12457889999999999999999999976432
Q ss_pred CcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEcc---------CChhhHHHHHHHHHHCCCCEE
Q 015110 246 DTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHL---------SDASSSLDLLMEAKTNGDSIT 316 (413)
Q Consensus 246 ~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~---------s~~~~~~~~i~~ak~~G~~v~ 316 (413)
++.+.+.+++++++++ |+++|++|+ ++. +.+++++.+++.| .++
T Consensus 240 ------------------~~~~~l~~~~~~a~~~-------g~~v~i~H~~~~~~~~~g~~~-~~~~~l~~a~~~g-~v~ 292 (496)
T 1rk6_A 240 ------------------HIVQALEETFRIGREL-------DVPVVISHHKVMGKLNFGRSK-ETLALIEAAMASQ-DVS 292 (496)
T ss_dssp ------------------THHHHHHHHHHHHHHH-------TSCEEECSCCCCSGGGTTTHH-HHHHHHHHHHHHS-CEE
T ss_pred ------------------cHHHHHHHHHHHHHHc-------CCeEEEEEEeccCCcchhhHH-HHHHHHHHHHHcC-CeE
Confidence 2345778888888875 899999999 445 6789999999999 999
Q ss_pred EEccccccccccccCC---CC-CcceEEcCCC--------------CChhcHHHHHHHHhcCCc----------------
Q 015110 317 VETCPHYLAFSAEEIP---DG-DTRFKCAPPI--------------RDAANKEKLWEALMDGHI---------------- 362 (413)
Q Consensus 317 ~e~~p~~l~l~~~~~~---~~-~~~~k~~Ppl--------------r~~~~~~~L~~~l~~G~i---------------- 362 (413)
++++|+++..+...+. .. +.....+||. |+..++++||+.+++|++
T Consensus 293 ~~~~~~~~~~~~~~~~~l~~~~~~~v~~~p~~~~l~~~~l~~~~~~~g~~~~~~l~~~l~~G~i~~~~~~~~v~~~~~~~ 372 (496)
T 1rk6_A 293 LDAYPYVAGSTMLKQDRVLLAGRTLITWCKPYPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMDEPDVQRILAFG 372 (496)
T ss_dssp EEECSCSCEEEECCCCTTTTSSCEEEEEESSCGGGTTCBHHHHHHHTTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHST
T ss_pred EEEeccCCCCCcccHHHhcCccceEEeccCCCcccccCcHHHHHHHcCCCHHHHHHHHHhcCceeecCCHHHHHHHHcCC
Confidence 9999986654432222 22 2334444543 667789999999999986
Q ss_pred -cEEcCCCCCCC
Q 015110 363 -DMLSSDHSPTV 373 (413)
Q Consensus 363 -~~i~sDh~p~~ 373 (413)
.++|||+.|++
T Consensus 373 ~~~iGTD~~~~~ 384 (496)
T 1rk6_A 373 PTMIGSDGLPHD 384 (496)
T ss_dssp TEEECCCCCTTC
T ss_pred CEEEecCCCCCC
Confidence 59999999875
No 21
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=99.96 E-value=1.2e-27 Score=243.88 Aligned_cols=271 Identities=22% Similarity=0.266 Sum_probs=182.3
Q ss_pred CcceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCC-------C--CCCCCcEEecCCCEEeeeeeecccccCCCCC
Q 015110 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP-------R--NSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~-------~--~~~~~~vID~~G~~vlPGlID~H~H~~~~~~ 112 (413)
.++++|+|++|+|+.+..+++|+|+||||++|++..... . ..++.++||++|++|+|||||+|+|+..+.
T Consensus 65 ~~dllI~n~~Vid~~gi~~~dI~I~dGrI~~IG~~~~~~~~~~~~~~~~~~~~~evIDa~G~iV~PGlID~HvHl~~p~- 143 (569)
T 1e9y_B 65 ELDLIITNALIVDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISPQ- 143 (569)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEEECEEEEEEETTCTT-
T ss_pred cCCEEEEeeEEECCCCcEeeeEEEECCEEEEeecCCCccccccccccccCCCCCeEEECCCCEEecCEEEEeecCCCcH-
Confidence 468999999999977666899999999999999753210 0 013568999999999999999999997643
Q ss_pred CCccchHHHHHHHHhCCceEEEeCCCCC----CCCCC--cHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHH
Q 015110 113 TEWEGFPSGTKAAAAGGITTLIDMPLNS----DPSTI--STETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL 186 (413)
Q Consensus 113 ~~~e~~~~~~~~al~~GvTTv~d~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 186 (413)
..++++++||||+++|+.+. .+... ....++..++.... ..+++.+++.... ...+.+++++
T Consensus 144 --------~~~~al~~GvTTv~d~g~~p~~~t~~~~~~~g~~~l~~~~~a~~~-~~~~~~~~g~g~~---~~~~~l~e~~ 211 (569)
T 1e9y_B 144 --------QIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEE-YSMNLGFLAKGNA---SNDASLADQI 211 (569)
T ss_dssp --------HHHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHTT-SSSEEEEEEECCC---SCHHHHHHHH
T ss_pred --------HHHHHHhCCeeEEEcCCcCCCCCCcCcccCCcHHHHHHHHHHhcc-cCceEEEECCCCc---CCHHHHHHHH
Confidence 26889999999999985211 11111 13445555555443 3467766543211 2356788888
Q ss_pred HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHH
Q 015110 187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEE 266 (413)
Q Consensus 187 ~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~ 266 (413)
+.|+.++|.+..+ ..++++++++++.|+++|+++++|+++.... +
T Consensus 212 ~~Ga~gik~~~~~-------~~t~e~l~~~l~~A~~~g~~V~iHa~~~~e~-----------g----------------- 256 (569)
T 1e9y_B 212 EAGAIGFKIHEDW-------GTTPSAINHALDVADKYDVQVAIHTDTLNEA-----------G----------------- 256 (569)
T ss_dssp HTTCSEEEECGGG-------CCCHHHHHHHHHHHHHTTCEEEECCCTTCSS-----------C-----------------
T ss_pred HcCCCEEEecCCC-------CCCHHHHHHHHHHHHHhCCEEEEEcCCcccc-----------h-----------------
Confidence 8999999987532 3688999999999999999999999753210 0
Q ss_pred HHHHHHHHHHhhcccCCCCCCceEEEEccCChhhH---HHHHHHHHHCCCCEEEEccccccccccccCCC-CCc---ceE
Q 015110 267 AAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSS---LDLLMEAKTNGDSITVETCPHYLAFSAEEIPD-GDT---RFK 339 (413)
Q Consensus 267 ~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~---~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~-~~~---~~k 339 (413)
.+...+ ++. .|.++|+.|++.. .. .++|+.+++.|+ .+.++++++.++.+.+.. .+. ...
T Consensus 257 -~~~~~l--a~~-------~g~~~hi~H~~~~-~~~~~~d~I~~~~~~gv--~~~~~~ptl~~t~~~~~~~~d~~~v~h~ 323 (569)
T 1e9y_B 257 -CVEDTM--AAI-------AGRTMHTFHTEGA-GGGHAPDIIKVAGEHNI--LPASTNPTIPFTVNTEAEHMDMLMVCHH 323 (569)
T ss_dssp -CHHHHH--HHH-------TTCCEEETTTTST-TSCSTTTGGGGGGSTTE--EEEECGGGCSCBTTHHHHHHHHHHHTTT
T ss_pred -HHHHHH--HHH-------cCCCEEEEEcccC-cccccHHHHHHHHHcCC--eeEeeCCccccccchhhhhhchhhhhhh
Confidence 011111 222 2788999999985 43 678888888875 333444445443221100 000 011
Q ss_pred EcCCC---------CChhcHHHHHHHHh-cCCccEEcCCCCCCC
Q 015110 340 CAPPI---------RDAANKEKLWEALM-DGHIDMLSSDHSPTV 373 (413)
Q Consensus 340 ~~Ppl---------r~~~~~~~L~~~l~-~G~i~~i~sDh~p~~ 373 (413)
+.|++ |...++.++|+.+. .|+++++||||.|++
T Consensus 324 l~~~~~ed~~~~~~rlr~~~~a~~~~L~d~Gv~v~iGSD~~~~~ 367 (569)
T 1e9y_B 324 KDKSIKEDVQFADSRIRPQTIAAEDTLHDMGAFSITSSDSQAMG 367 (569)
T ss_dssp CCSSCHHHHHHHHHHCCHHHHHHHHHHHHTTSCCEECCCTTSSC
T ss_pred cCcccHHHHHHhhcchhhhHHHHHHHHHhCCCEEEEeCCCCccC
Confidence 23333 12346788999998 499999999999876
No 22
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=99.92 E-value=2.4e-24 Score=213.33 Aligned_cols=270 Identities=16% Similarity=0.059 Sum_probs=170.0
Q ss_pred CcceEEEccEEEcCCCc---eeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCC----
Q 015110 42 YNQYWLTSKRIVTPKGV---ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE---- 114 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~~---~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~---- 114 (413)
|++++|+|++|+++.+. .+++|+|+||||++|++....+ ++.++||++|++|+|||||+|+|+.......
T Consensus 3 m~~~~i~n~~i~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~~---~~~~~iD~~g~~v~PGliD~H~H~~~~~~~~~~~~ 79 (426)
T 2r8c_A 3 LTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKS---SNAHVIDVKGKTIMPGLIDLHVHVVAIEFNLPRVA 79 (426)
T ss_dssp -CEEEEEEEEECCTTSSSCEEEEEEEEESSBEEEEESSCCCC---SSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHH
T ss_pred cccEEEEeeEEEeCCCCcccCCceEEEECCEEEEEcCCCCCC---CCCeEEECCCCEEcCCeEeeeeccccccCCchhhc
Confidence 45799999999998642 4689999999999999853322 4678999999999999999999998765321
Q ss_pred ---ccc----hHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEee-------------------
Q 015110 115 ---WEG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW------------------- 168 (413)
Q Consensus 115 ---~e~----~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 168 (413)
.+. .....+.++++||||++|++. . . ..++..++...... ..+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~-~--~----~~l~~~i~~~~~~g-pri~~~g~~i~~~~g~~~~~~~~~~ 151 (426)
T 2r8c_A 80 TLPNVLVTLRAVPIMRAMLRRGFTTVRDAGG-A--G----YPFKQAVESGLVEG-PRLFVSGRALSQTGGHADPRARSDY 151 (426)
T ss_dssp HSCHHHHHHHHHHHHHHHHHTTEEEEEECSS-C--C----HHHHHHHHTTSSCC-CEEEECCSEEECTTSTTCCCCCSSB
T ss_pred cCCHHHHHHHHHHHHHHHHhCCeEEEEeCCC-c--h----HHHHHHHHcCCCCC-CeEEecCCcccCCCCCccccccccc
Confidence 111 113456779999999999972 1 1 13333333221110 011100
Q ss_pred ----------------ceecCCchhhHHHHHHHHHcCCcEEEEeecCCC-----CCCCCCCCHHHHHHHHHHHHhcCCCE
Q 015110 169 ----------------GGLVPENAYNASALEALLNAGVLGLKSFMCPSG-----INDFPMTNASHIKEGLSVLARYKRPL 227 (413)
Q Consensus 169 ----------------~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~-----~~~~~~~~~~~l~~~~~~A~~~g~~v 227 (413)
........+.++.++++++.|+..+|++..... ....+.++.++++++++.|+++|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v 231 (426)
T 2r8c_A 152 MPPDSPCGCCVRVGALGRVADGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYV 231 (426)
T ss_dssp CCCSCSSSSBCCTTCCEEECCSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCE
T ss_pred ccccccccccccccccccccCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEE
Confidence 001112233456777888889999999865311 11223679999999999999999999
Q ss_pred EEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHH
Q 015110 228 LVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLME 307 (413)
Q Consensus 228 ~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ 307 (413)
++|+.+.. ++.++++. |.. .+.|+... .-+.++.
T Consensus 232 ~~H~~~~~--------------------------------~i~~al~~-----------G~~-~i~H~~~~--~~~~~~~ 265 (426)
T 2r8c_A 232 LAHAYTPA--------------------------------AIARAVRC-----------GVR-TIEHGNLI--DDETARL 265 (426)
T ss_dssp EEEECSHH--------------------------------HHHHHHHT-----------TCS-EEEECTTC--CHHHHHH
T ss_pred EEEeCChH--------------------------------HHHHHHHc-----------CCC-EEecCCcC--CHHHHHH
Confidence 99997432 23334432 333 57887754 1356777
Q ss_pred HHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCC--hhcHHHHHHHHhcCCccEEcCCCC
Q 015110 308 AKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRD--AANKEKLWEALMDGHIDMLSSDHS 370 (413)
Q Consensus 308 ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~--~~~~~~L~~~l~~G~i~~i~sDh~ 370 (413)
+++.|+.++.+..++...+.........+.. +..++. ......+.+.++.|...+++||+.
T Consensus 266 ~~~~gv~~~pt~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~ 328 (426)
T 2r8c_A 266 VAEHGAYVVPTLVTYDALASEGEKYGLPPES--IAKIADVHGAGLHSIEIMKRAGVKMGFGTDLL 328 (426)
T ss_dssp HHHTTCEEECCTHHHHHHHHHTTTTTCCHHH--HTTSTTTGGGHHHHHHHHHHTTCEECCCCCCC
T ss_pred HHHcCCeEeechHHHHHHhhhccccCCCHHH--HHHHHHHHHHHHHHHHHHHHcCCeEEEecCCC
Confidence 7888888766654543333221110000000 011111 234556777888999999999995
No 23
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=99.92 E-value=1e-23 Score=209.11 Aligned_cols=269 Identities=16% Similarity=0.213 Sum_probs=163.5
Q ss_pred CcceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCC--------
Q 015110 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-------- 113 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~-------- 113 (413)
+++++|+|++|++++ .+++|+|+||||++||+....+ .++.++||++|++|+|||||+|+|+......
T Consensus 7 ~~~~li~n~~v~~~~--~~~~v~I~~g~I~~vg~~~~~~--~~~~~viD~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~~ 82 (430)
T 1ra0_A 7 NALQTIINARLPGEE--GLWQIHLQDGKISAIDAQSGVM--PITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQS 82 (430)
T ss_dssp -CCCEEEEEBCTTCC--SEEEEEEETTEEEEEEEESSCC--CCCTTEEECTTCEEESCEEEEEECTTTTTCTTSSSCCSS
T ss_pred CCcEEEEeeEecCCC--ceeEEEEECCEEEEeecCCCCC--CCCcceEccCCCEecccccccccchhhhhhcCCCcCCCC
Confidence 457999999999876 6789999999999999754321 1356899999999999999999999753211
Q ss_pred -----------------CccchHH----HHHHHHhCCceEEEeCCCCC-CCCCCcHHHHHHHHHHHhc-CCeeeEEeece
Q 015110 114 -----------------EWEGFPS----GTKAAAAGGITTLIDMPLNS-DPSTISTETLKLKVDAAEK-RIYVDVGFWGG 170 (413)
Q Consensus 114 -----------------~~e~~~~----~~~~al~~GvTTv~d~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 170 (413)
+.++++. ..+.++++||||+++++ +. .+.. ..++...+.... +..+++....
T Consensus 83 ~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~- 157 (430)
T 1ra0_A 83 GTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHV-DVSDATL---TALKAMLEVKQEVAPWIDLQIVA- 157 (430)
T ss_dssp CCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEE-ECCSTTC---HHHHHHHHHHHHHTTTCEEEEEE-
T ss_pred CCHHHHHHHhHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeecc-ccCChHH---HHHHHHHHHHHhhhhhEEEEEEe-
Confidence 1123332 23456799999999987 33 2221 223322222111 2334443221
Q ss_pred ecC----CchhhHHHHHHHHHcCCcEEEEeecCCCCCCCCC---CCHHHHHHHHHHHHhcCCCEEEecCChh-hchhhHh
Q 015110 171 LVP----ENAYNASALEALLNAGVLGLKSFMCPSGINDFPM---TNASHIKEGLSVLARYKRPLLVHAEMEK-GSERHVK 242 (413)
Q Consensus 171 ~~~----~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~---~~~~~l~~~~~~A~~~g~~v~~H~e~~~-~~~~~~~ 242 (413)
+.. ...+..+.++++.+.|...+. +. +. .++ ++.++++++++.|+++|+++.+|+.+.. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~-~~----~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~---- 227 (430)
T 1ra0_A 158 FPQEGILSYPNGEALLEEALRLGADVVG-AI-PH----FEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQS---- 227 (430)
T ss_dssp ECTTCSSSSTTHHHHHHHHHHTTCSEEC-CC-GG----GSSSHHHHHHHHHHHHHHHHHHTCEEEEEECCSSCTTC----
T ss_pred cCCcccccCchHHHHHHHHHHhCCCeEe-ee-ec----ccccccccHHHHHHHHHHHHHcCCCEEEEECCCCchhH----
Confidence 110 112234557777777753332 11 11 123 6788999999999999999999985422 111
Q ss_pred hccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChh-----hHHHHHHHHHHCCCCEEE
Q 015110 243 LEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS-----SSLDLLMEAKTNGDSITV 317 (413)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~-----~~~~~i~~ak~~G~~v~~ 317 (413)
..+++.++.+.+.+ .+.++++.|++..+ +..+.++.++++|+ ++
T Consensus 228 ------------------------~~~~~~~~~~~~~g-----~~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~gv--~v 276 (430)
T 1ra0_A 228 ------------------------RFVETVAALAHHEG-----MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGI--NF 276 (430)
T ss_dssp ------------------------CHHHHHHHHHHHHT-----CGGGEEEEECGGGGGSCHHHHHHHHHHHHHHTC--EE
T ss_pred ------------------------HHHHHHHHHHHHhC-----CCCCEEEEeccccccCChHhHHHHHHHHHHcCC--EE
Confidence 01222233333321 14567788876431 12357777777775 45
Q ss_pred Ecccc-ccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCccEEcCCCCC
Q 015110 318 ETCPH-YLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP 371 (413)
Q Consensus 318 e~~p~-~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p 371 (413)
.+||+ ++.+... .+ ..|+++..... ++.++.|+++++||||.+
T Consensus 277 ~~~p~~~~~~~~~----~~----~~p~~~~~~~~---~~~~~~Gv~~~lgTD~~~ 320 (430)
T 1ra0_A 277 VANPLVNIHLQGR----FD----TYPKRRGITRV---KEMLESGINVCFGHDGVF 320 (430)
T ss_dssp EECHHHHHHHTTT----TC----CSSCCCCCCCH---HHHHHTTCCEEECCBCSS
T ss_pred EECchhhhhhccc----cC----CCCCcCCCCCH---HHHHHCCCEEEEeCCCCc
Confidence 58886 3333211 11 15677666554 455677999999999973
No 24
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=99.91 E-value=1.6e-23 Score=205.98 Aligned_cols=268 Identities=14% Similarity=0.135 Sum_probs=162.2
Q ss_pred CcceEEEccEEEcCCC--ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCCccch-
Q 015110 42 YNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGF- 118 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~- 118 (413)
+++++|+|++|+++++ ...++|+|+||||++|++. . + ++.++||++|++|+|||||+|+|+...+...++.+
T Consensus 5 ~~~~~i~n~~v~~~~~~~~~~~~v~I~~g~I~~ig~~-~-~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~ 79 (408)
T 3be7_A 5 SEDFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIGKI-N-T---KDATVISIPDLILIPGLMDSHVHIVGNDSKGEESIA 79 (408)
T ss_dssp CCCEEEEEEEEECTTTCCEECCEEEEETTEEEEEECC-C-C---SSSEEEEEEEEEEEECEEEEEECCSSCCCCSGGGTT
T ss_pred cceEEEEeeEEEeCCCCceeeeEEEEECCEEEEEeCC-C-C---CCCeEEECCCCEECcCceeeeEcccCCCCcchhhhc
Confidence 3579999999999876 3458999999999999975 2 2 35689999999999999999999982221222111
Q ss_pred ----------HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeec-------eec--C------
Q 015110 119 ----------PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG-------GLV--P------ 173 (413)
Q Consensus 119 ----------~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--~------ 173 (413)
...++.++++||||+++++ +..+ ....++...+...... .++...+ +.. +
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~---~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~g~~~~~~~~~~~~ 154 (408)
T 3be7_A 80 DSSHMGTVWGVVNAEKTLMAGFTTVRNVG-AANY---ADVSVRDAIERGVING-PTMLVSGPALGITGGHCDHNLLPPEF 154 (408)
T ss_dssp CCTHHHHHHHHHHHHHHHTTTEEEEEECC-CSTT---HHHHHHHHHHTTSSCC-CEEEECCSCBBCTTSTTSCCCSCTTT
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEeCC-Cccc---cCHHHHHHHHCCCCCC-CEEEEccceeeccCCCCccccccccc
Confidence 1257788999999999997 3322 1122332222111000 0111100 000 0
Q ss_pred --------Cc-hhhHHHHHHHHHcCCcEEEEeecCC-----CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchh
Q 015110 174 --------EN-AYNASALEALLNAGVLGLKSFMCPS-----GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER 239 (413)
Q Consensus 174 --------~~-~~~~~~l~~l~~~G~~~ik~~~~~~-----~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~ 239 (413)
.. .+..+.+++..+.|+..+|.+.... ...+.+.++.++++++++.|+++|+++.+|+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~---- 230 (408)
T 3be7_A 155 NYSSEGVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLI---- 230 (408)
T ss_dssp CCCCTTBCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCEEEEEECSHH----
T ss_pred cccCCcccCCHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHH----
Confidence 01 1122334445567888899875331 10113467899999999999999999999996532
Q ss_pred hHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEc
Q 015110 240 HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET 319 (413)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~ 319 (413)
++..+++. |+. .+.|.... .-+.++.+++.|+.++++.
T Consensus 231 ----------------------------~i~~~~~~-----------g~~-~i~H~~~~--~~~~i~~~~~~g~~v~~~~ 268 (408)
T 3be7_A 231 ----------------------------GIKAAIKA-----------GVD-SVEHASFI--DDETIDMAIKNNTVLSMDI 268 (408)
T ss_dssp ----------------------------HHHHHHHH-----------TCS-EEEECTTC--CHHHHHHHHHTTCEEECCC
T ss_pred ----------------------------HHHHHHHc-----------CCC-EEEECCCC--CHHHHHHHHHCCCEEeeee
Confidence 22223322 332 57887764 2456777788887664332
Q ss_pred cccccccccccCCCCCcceEEcCCCCCh------hcHHHHHHHHhcCCccEEcCCCCC
Q 015110 320 CPHYLAFSAEEIPDGDTRFKCAPPIRDA------ANKEKLWEALMDGHIDMLSSDHSP 371 (413)
Q Consensus 320 ~p~~l~l~~~~~~~~~~~~k~~Pplr~~------~~~~~L~~~l~~G~i~~i~sDh~p 371 (413)
.+.+ .+. ..+...++.|+++.. ..+..+++.++.|+.++++||+.+
T Consensus 269 ~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gTD~~~ 320 (408)
T 3be7_A 269 FVSD-YIL-----GEGAKAGIREESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGI 320 (408)
T ss_dssp STHH-HHH-----TTTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCEECCCCBTT
T ss_pred cHHH-Hhh-----hhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 2211 110 011112233433322 234678888999999999999964
No 25
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=99.91 E-value=6.9e-24 Score=208.18 Aligned_cols=185 Identities=18% Similarity=0.146 Sum_probs=124.7
Q ss_pred ceEEEccEEEcCCCc---eeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCCcc----
Q 015110 44 QYWLTSKRIVTPKGV---ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWE---- 116 (413)
Q Consensus 44 ~lli~n~~vi~~~~~---~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e---- 116 (413)
+++|+|++|+|+++. .+++|+|+||||++|++.... .+++.++||++|++|||||||+|+|+.......+.
T Consensus 3 ~~~i~~~~i~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~--~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~ 80 (403)
T 3gnh_A 3 IKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGDA--VPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSLE 80 (403)
T ss_dssp EEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTSC--CCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCSGGGGG
T ss_pred cEEEEccEEEECCCCcccCCCEEEEECCEEEEEeCCCCC--CCCCCeEEECCCCEEcCCeEeeeEccccCcccchhhhhc
Confidence 689999999998762 478999999999999986531 12477999999999999999999999866432111
Q ss_pred ----c----hHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcC-CeeeEE-ee----ce------------
Q 015110 117 ----G----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR-IYVDVG-FW----GG------------ 170 (413)
Q Consensus 117 ----~----~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~----~~------------ 170 (413)
. ....++.++++||||++|++ +. ......++..++..... ..+-.. .. ++
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~---~~~~~~~~~~~~~g~~~gpr~~~~~~~~~~~g~~~~~~~~~~~~~ 156 (403)
T 3gnh_A 81 YSDRFWSVVQTANAKKTLEAGFTTVRNVG-AA---DYDDVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMD 156 (403)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTEEEEEECC-CS---TTHHHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGC
T ss_pred CCHHHHHHHHHHHHHHHHhCCeeEEEeCC-CC---ccccHHHHHHHHCCCCCCCeEEecCcccccCCCCcccccCchhhc
Confidence 0 11234788999999999997 21 11222333333322100 111100 00 00
Q ss_pred -----ecCCchhhHHHHHHHHHcCCcEEEEeecCC-----CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015110 171 -----LVPENAYNASALEALLNAGVLGLKSFMCPS-----GINDFPMTNASHIKEGLSVLARYKRPLLVHAEME 234 (413)
Q Consensus 171 -----~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~-----~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~ 234 (413)
......+.++.++++.+.|+..+|+++... .....+.++.++++++++.|+++|+++++|+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~ 230 (403)
T 3gnh_A 157 QKNPFNSDSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGA 230 (403)
T ss_dssp CCCTTCCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSH
T ss_pred ccCCcccCCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 011123446778888889999999986431 1122346799999999999999999999999653
No 26
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=99.91 E-value=5.9e-24 Score=206.95 Aligned_cols=257 Identities=18% Similarity=0.180 Sum_probs=161.4
Q ss_pred CcceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCC-CEEeeeeeecccccCCCCCCCccchHH
Q 015110 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGE-AVIMPGLIDVHAHLDDPGRTEWEGFPS 120 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G-~~vlPGlID~H~H~~~~~~~~~e~~~~ 120 (413)
+++++|+|++|++++ +++|+|+||||++|++.... ++.++||++| ++|+|||||+|+|+..++...++ .
T Consensus 4 ~~~~~i~~~~v~~~~---~~~v~i~~g~I~~ig~~~~~----~~~~~iD~~g~~~v~PG~ID~H~H~~~~~~~~~~---~ 73 (379)
T 2ics_A 4 DYDLLIKNGQTVNGM---PVEIAIKEKKIAAVAATISG----SAKETIHLEPGTYVSAGWIDDHVHCFEKMALYYD---Y 73 (379)
T ss_dssp CEEEEEEEEECTTSC---EEEEEEETTEEEEEESCCCC----CEEEEEECCTTCEEEECEEEEEECCCTTSSSSCC---C
T ss_pred cccEEEECCEEEcCC---cceEEEECCEEEEecCCCCC----CCCcEEeCCCCEEEccCEEEeccccCccCccccC---c
Confidence 457899999999864 78999999999999875321 2457999999 99999999999999876543333 3
Q ss_pred HHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhc--CCeeeEEeeceecCC--c----hhhHHHHHHHHH---cC
Q 015110 121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK--RIYVDVGFWGGLVPE--N----AYNASALEALLN---AG 189 (413)
Q Consensus 121 ~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~----~~~~~~l~~l~~---~G 189 (413)
..+.++++||||+++++ +..+ .+.+.+....+.... ..++++... +..+. . ....++++++++ .|
T Consensus 74 ~~~~~~~~GvTtv~d~~-~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (379)
T 2ics_A 74 PDEIGVKKGVTTVIDAG-TTGA--ENIHEFYDLAQQAKTNVFGLVNISKW-GIVAQDELADLSKVQASLVKKAIQELPDF 149 (379)
T ss_dssp HHHHTGGGTEEEEEEES-SSCT--TTHHHHHHHHHTSSSEEEEEEESSTT-TTSSSCTTSSGGGCCHHHHHHHHHHCTTT
T ss_pred hhhhHhhCceeEEEcCC-CCCc--cCHHHHHHHHHhhcccEEEEcccccc-CCCCHHHHHHHHHHHHHHHHHHHHhhhCc
Confidence 45788999999999987 3222 233344433332211 111111111 11111 1 112456666665 47
Q ss_pred CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh-cCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHH
Q 015110 190 VLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAA 268 (413)
Q Consensus 190 ~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~ 268 (413)
+.++|.++.+.. ...++.+.++++++.|++ +|+++.+|+++...... .
T Consensus 150 ~~~i~~~~~~~~---~~~~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~~~----------------------------~ 198 (379)
T 2ics_A 150 VVGIKARMSRTV---IGDNGITPLELAKQIQQENQEIPLMVHIGSAPPHLD----------------------------E 198 (379)
T ss_dssp EEEEEEEESHHH---HTTCTTHHHHHHHHHHHTTTTCCEEEEECSSSSCHH----------------------------H
T ss_pred ceEEEEeccccc---cccchHHHHHHHHHHHHHhcCCeEEEeCCCCcchHH----------------------------H
Confidence 888888765321 123567888999999999 99999999864221000 0
Q ss_pred HHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChh
Q 015110 269 IRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAA 348 (413)
Q Consensus 269 v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~ 348 (413)
+.++++.. ..-..+ +.+.+.|+.|.|+. ...+.++.+++.|+ +++++|++.. .
T Consensus 199 ~~~~~~~g-~~~~H~-~~~~~~~~~~~s~~-~~~~~~~~~~~~g~--~~~~~p~~~~----------------------~ 251 (379)
T 2ics_A 199 ILALMEKG-DVLTHC-FNGKENGILDQATD-KIKDFAWQAYNKGV--VFDIGHGTDS----------------------F 251 (379)
T ss_dssp HHHHCCTT-CEEEST-TCCSTTSSEETTTT-EECHHHHHHHHTTC--EEECCCTTTS----------------------C
T ss_pred HHHHhhcC-Ceeeec-cCCCccchhhccCH-HHHHHHHHHHHcCC--EEEecCCCCC----------------------c
Confidence 00000000 000000 12344566776565 55677888888874 5667875211 0
Q ss_pred cHHHHHHHHhcC-CccEEcCCCC
Q 015110 349 NKEKLWEALMDG-HIDMLSSDHS 370 (413)
Q Consensus 349 ~~~~L~~~l~~G-~i~~i~sDh~ 370 (413)
..+.++++++.| .+++++||+.
T Consensus 252 ~~~~~~~~~~~G~~~~~l~TD~~ 274 (379)
T 2ics_A 252 NFHVAETALREGMKAASISTDIY 274 (379)
T ss_dssp CHHHHHHHHHTTCCCSBCCCCBC
T ss_pred CHHHHHHHHHcCCCcceEeccCc
Confidence 345688889999 9999999985
No 27
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=99.91 E-value=5.8e-23 Score=201.01 Aligned_cols=288 Identities=19% Similarity=0.222 Sum_probs=162.9
Q ss_pred CCcceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCC---ccc
Q 015110 41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE---WEG 117 (413)
Q Consensus 41 ~~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~---~e~ 117 (413)
.|..++|+|++|++++...+++|+|+||||++|++....+ ..++.++||++|++|+|||||+|+|+...+... ..+
T Consensus 6 ~~~~~~i~n~~v~~~~~~~~~~v~i~~g~I~~ig~~~~~~-~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~ 84 (390)
T 1onw_A 6 AAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSD-IVPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRT 84 (390)
T ss_dssp GGCCEEEESCEEESSSEEEECEEEEETTEEEEEETTCCTT-SSSSCEEEECTTCEEEECEEEEEECTTCCBCTTSGGGBC
T ss_pred ccceEEEECcEEECCCCCccceEEEECCEEEEEecCcccC-CCCCCeEEeCCCCEECcCeeEeeECccccCccccccccC
Confidence 3457899999999987656789999999999998754311 012468999999999999999999986432110 011
Q ss_pred hHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeecee-cCCc--hhhH-HHHHHHHHcCCcEE
Q 015110 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGL-VPEN--AYNA-SALEALLNAGVLGL 193 (413)
Q Consensus 118 ~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~-~~l~~l~~~G~~~i 193 (413)
....++.++++||||+++++ ++.+.....+.+....+.....+...+...+.+ .+.. .... ..+ .++ ....++
T Consensus 85 ~~~~~~~~~~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~-~~~-~~~~g~ 161 (390)
T 1onw_A 85 PEVALSRLTEAGVTSVVGLL-GTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDV-AII-DRVIGV 161 (390)
T ss_dssp CCCCHHHHHHTTEEEEEECC-CSCCSSCCHHHHHHHHHHHHHHTSEEEEEEECSCSSCCCSSSCHHHHH-HHC-TTEEEE
T ss_pred HHHHHHHHHHCCeeEEecCC-CcccccCcHHHHHHHHHHHHhcCCceEEeccccCCCchhhhhhhcchh-hhH-HHhhcc
Confidence 11246788999999999998 554544445544443333322222222211111 1111 0111 111 111 122334
Q ss_pred EEeecCCCCCCCCCCCHHHHHHHHHHHHhcCC------CEEEec-CChhhchhhHhhccCcCCccccccCCCCCchHHHH
Q 015110 194 KSFMCPSGINDFPMTNASHIKEGLSVLARYKR------PLLVHA-EMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEE 266 (413)
Q Consensus 194 k~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~------~v~~H~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~ 266 (413)
++.+.+.. .+..+.++++++++.+++.+. ++.+|+ ++..
T Consensus 162 ~~~~~~~~---~~~~~~~~l~~~~~~a~~~~~~~~~~g~~~~h~~~~~~------------------------------- 207 (390)
T 1onw_A 162 KCAISDHR---SAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKK------------------------------- 207 (390)
T ss_dssp EEEESSTT---SCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEECSCTT-------------------------------
T ss_pred eeeecCCC---CCCCCHHHHHHHHHHHhhhhhhhccCceEEEEeCCCHH-------------------------------
Confidence 55554432 234688899998888876543 367786 3221
Q ss_pred HHHHHHHHHHhhcccCCCCCCceEE---EEccCChhhHH--HHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEc
Q 015110 267 AAIRELLTVAKDTRTDGPAEGAHLH---IVHLSDASSSL--DLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCA 341 (413)
Q Consensus 267 ~~v~~~~~~a~~~~~~~~~~g~~vh---i~H~s~~~~~~--~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~ 341 (413)
.++.+.++++.. +.+++ ..|++.. ..+ +.++.+++.|. +.+ .++ ++
T Consensus 208 -~~~~~~~~~~~g-------~~~v~~l~~~h~~~~-~~~~~~~~~~~~~~~~-~~~-~~~------------------~~ 258 (390)
T 1onw_A 208 -ALQPIYDLLENC-------DVPISKLLPTHVNRN-VPLFEQALEFARKGGT-IDI-TSS------------------ID 258 (390)
T ss_dssp -TTHHHHHHHHTC-------CCCGGGEEEECGGGS-HHHHHHHHHHHHTTCC-EEE-ETT------------------CC
T ss_pred -HHHHHHHHHhcc-------CCceEEeeccccccC-HHHHHHHHHHHhcCCc-ccc-ccc------------------cC
Confidence 112223333321 33332 3676543 332 45555555542 111 111 13
Q ss_pred CCCCChhcHHHHHHHHhcCC-cc--EEcCCCCCCChhhhccCCCCccccCCCcchHhHHHHHHh
Q 015110 342 PPIRDAANKEKLWEALMDGH-ID--MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQIFCSLFF 402 (413)
Q Consensus 342 Pplr~~~~~~~L~~~l~~G~-i~--~i~sDh~p~~~~~k~~~~~~~~~~~~G~~~~e~~l~~~~ 402 (413)
|| ..+++.||++++.|. +| +++|||.|....... +....+.|++|++++++.++
T Consensus 259 ~~---~~~~~~l~~~~~~g~~~d~i~l~TD~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~ 315 (390)
T 1onw_A 259 EP---VAPAEGIARAVQAGIPLARVTLSSDGNGSQPFFDD----EGNLTHIGVAGFETLLETVQ 315 (390)
T ss_dssp SS---SCHHHHHHHHHHTTCCGGGEEEECCBTCC-----------------CCCCSHHHHHHHH
T ss_pred CC---CcCHHHHHHHHHcCCCccceEEEccCCCCCcccCC----ccccccccCCCHHHHHHHHH
Confidence 44 258899999999997 77 999999865321111 11124678999999999876
No 28
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=99.91 E-value=6.1e-24 Score=209.89 Aligned_cols=266 Identities=14% Similarity=0.031 Sum_probs=163.9
Q ss_pred CcceEEEccEEEcCCCc---eeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCC----
Q 015110 42 YNQYWLTSKRIVTPKGV---ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE---- 114 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~~---~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~---- 114 (413)
|.+++|+|++|+|+++. .+++|+|+||||++|++....+ ++.++||++|++|+|||||+|+|+.......
T Consensus 3 ~~~~~i~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~---~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~ 79 (423)
T 3feq_A 3 LTITVLQGGNVLDLERGVLLEHHHVVIDGERIVEVTDRPVDL---PNAQAIDVRGKTVMPGFIDCHVHVLASNANLGVNA 79 (423)
T ss_dssp -CEEEEEEEEEEETTTTEEEEEEEEEEETTEEEEEECSCCCC---SSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHH
T ss_pred ceEEEEEccEEEeCCCCcccCCceEEEECCEEEEecCCCCCC---CCCeEEeCCCCEECCCeeeeEeeecccCCChhhhh
Confidence 46899999999999753 3789999999999999853322 4679999999999999999999998764411
Q ss_pred ---cc----chHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEee-------------------
Q 015110 115 ---WE----GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW------------------- 168 (413)
Q Consensus 115 ---~e----~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 168 (413)
.+ ......+.++++||||++|++. . . ..+...++...... ..+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~-~--~----~~l~~~~~~~~~~g-~r~~~~g~~~~~~~g~~~~~~~~~~ 151 (423)
T 3feq_A 80 TQPNILAAIRSLPILDAMLSRGFTSVRDAGG-A--D----WSLMQAVETGLVSG-PRIFPSGKALSQTGGHGDFRPRGDL 151 (423)
T ss_dssp HSCHHHHHHTHHHHHHHHHHTTEEEEEECSS-C--C----HHHHHHHHTTSSCS-CEEECCCSEEECTTSTTCCCCC---
T ss_pred cCCHHHHHHHHHHHHHHHHhCCeEEEEeCCC-c--h----HHHHHHHHcCCCCC-CeEEecCcccccCCCCccccccccc
Confidence 11 1123456779999999999972 1 1 13333333221100 011000
Q ss_pred -------------ceecCCchhhHHHHHHHHHcCCcEEEEeecCCC-----CCCCCCCCHHHHHHHHHHHHhcCCCEEEe
Q 015110 169 -------------GGLVPENAYNASALEALLNAGVLGLKSFMCPSG-----INDFPMTNASHIKEGLSVLARYKRPLLVH 230 (413)
Q Consensus 169 -------------~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~-----~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 230 (413)
........+..+.++++++.|+..+|++..... ......++.++++++++.|+++|+++++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H 231 (423)
T 3feq_A 152 LEPCSCCFRTGAIARVVDGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAH 231 (423)
T ss_dssp CCCCCSSCCTTCSEEECCSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cccccccccccccceecCCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEE
Confidence 001112233456777888899999999865211 11223679999999999999999999999
Q ss_pred cCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHH
Q 015110 231 AEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKT 310 (413)
Q Consensus 231 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~ 310 (413)
+.+.. ++.++++.. .. .+.|+... .-+.++..++
T Consensus 232 ~~~~~--------------------------------~i~~~l~~g-----------~~-~i~H~~~~--~~~~~~~l~~ 265 (423)
T 3feq_A 232 AYTGR--------------------------------AIARAVRCG-----------VR-TIEHGNLV--DEAAAKLMHE 265 (423)
T ss_dssp EEEHH--------------------------------HHHHHHHHT-----------CC-EEEEEEEC--CHHHHHHHHH
T ss_pred eCChH--------------------------------HHHHHHHcC-----------CC-EEeccCcC--CHHHHHHHHH
Confidence 96432 344444432 22 35554432 1234555666
Q ss_pred CCCCEEEEccccccccccccCCCCCcceEEcCCCCCh------hcHHHHHHHHhcCCccEEcCCCC
Q 015110 311 NGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA------ANKEKLWEALMDGHIDMLSSDHS 370 (413)
Q Consensus 311 ~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~------~~~~~L~~~l~~G~i~~i~sDh~ 370 (413)
.|+.++.+..++...+.... ...++|..+.. .....+.+.++.|...++|||+.
T Consensus 266 ~gv~~~pt~~~~~~~~~~~~------~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~gTD~~ 325 (423)
T 3feq_A 266 HGAFVVPTLVTYDALAKHGA------EFGMPPESVAKVASVQQKGRESLEIYANAGVKMGFGSDLL 325 (423)
T ss_dssp HTCEEECCTHHHHHHHHHTG------GGTCCTTTSSTHHHHHHHHHHHHHHHHHHTCCBCCCCCCC
T ss_pred CCCccccchHHHHHHHhccc------ccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 67766554434332222111 01112222111 13445667777899999999995
No 29
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=99.90 E-value=1e-22 Score=198.87 Aligned_cols=256 Identities=15% Similarity=0.142 Sum_probs=160.8
Q ss_pred CcceEEEccEE-EcCCC----ceeeEEEEECCEEEEcccCCCCCCCCCC-CcEEecCCCEEeeeeeecccccCCCCCCCc
Q 015110 42 YNQYWLTSKRI-VTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKT-GQVVDYGEAVIMPGLIDVHAHLDDPGRTEW 115 (413)
Q Consensus 42 ~~~lli~n~~v-i~~~~----~~~~~V~I~dG~I~~Ig~~~~~~~~~~~-~~vID~~G~~vlPGlID~H~H~~~~~~~~~ 115 (413)
|.+++|+|++| +++++ ..+++|+|+||||++|++..... .++ .++||++|++|+|||||+|+|+..+.+...
T Consensus 1 m~~~li~n~~v~~~~~~~~~~~~~~~v~I~~g~I~~Ig~~~~~~--~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~ 78 (386)
T 2vun_A 1 MSKTIIKNIGKIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMK--DAGDATIIDAAGSTVTPGLLDTHVHVSGGDYAPR 78 (386)
T ss_dssp -CEEEEESCSEEECSCTTSCEECCSEEEEETTEEEEEESGGGGT--TCTTCEEEECTTCEEEECEEEEEECCCSTTEEGG
T ss_pred CccEEEeccEEEEcCCCCccccccceEEEECCEEEEecCccccC--CCCCceEEcCCCCEEccceeeccccccCCCcChh
Confidence 45789999999 99875 24689999999999998732211 124 589999999999999999999985322110
Q ss_pred cchHHHHHHHHhCCceEEEeCCC---CCCCCCCcHHHHH--HHHHHHh--cCCeeeEEeece---ecCCchhhHHHHHHH
Q 015110 116 EGFPSGTKAAAAGGITTLIDMPL---NSDPSTISTETLK--LKVDAAE--KRIYVDVGFWGG---LVPENAYNASALEAL 185 (413)
Q Consensus 116 e~~~~~~~~al~~GvTTv~d~~~---~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~l~~l 185 (413)
......++.++++||||+++++. ...+ ...+.++ ..++... ........+..+ +... ...++++++
T Consensus 79 ~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~ 154 (386)
T 2vun_A 79 QKTMDFISSALHGGVTTMISAGSPHFPGRP--KDAAGTKALAITLSKSYYNARPAGVKVHGGAVILEKG--LTEEDFIEM 154 (386)
T ss_dssp GTEESHHHHHHTTTEEEEEECCCTTSTTCC--CSHHHHHHHHHHHHHHHHHCCGGGCEEECCEECCCTT--CCHHHHHHH
T ss_pred HHHHHHHHHHHhCCceEEEeccccccCCCh--hhHHHHHHHHHHhhcccccccccceeeccCcccccCC--cCHHHHHHH
Confidence 11123688999999999999871 0222 2232333 2221111 000000111111 1111 123678888
Q ss_pred HHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHH
Q 015110 186 LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWE 265 (413)
Q Consensus 186 ~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E 265 (413)
++.|+..+|.+... ..++++.++++++.|+++|+++.+|+++..... .+.
T Consensus 155 ~~~g~~~ik~~~~~------~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~---------~~~--------------- 204 (386)
T 2vun_A 155 KKEGVWIVGEVGLG------TIKNPEDAAPMVEWAHKHGFKVQMHTGGTSIPG---------SST--------------- 204 (386)
T ss_dssp HHTTCCEEEEETSS------SCCSHHHHHHHHHHHHHTTCEEEEECSCCSCST---------TCS---------------
T ss_pred HHhCCCeEEEeecC------CCCCHHHHHHHHHHHHHCCCeEEEecCCccccc---------cCH---------------
Confidence 88899999987422 236889999999999999999999997543210 000
Q ss_pred HHHHHHHHHHHhhcccCCCCCCceEEEEccCC---hhhHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcC
Q 015110 266 EAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD---ASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAP 342 (413)
Q Consensus 266 ~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~---~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~P 342 (413)
..+..+++ . |.+ .+.|++. . ...+.++.++++|+.+. .+++ + +
T Consensus 205 -~~i~~~~~----~-------G~~-~i~H~~~~~~~-~~~~~~~~~~~~g~~vl--~~~~----~-------g------- 250 (386)
T 2vun_A 205 -VTADDVIK----T-------KPD-VVSHINGGPTA-ISVQEVDRIMDETDFAM--EIVQ----C-------G------- 250 (386)
T ss_dssp -CCHHHHHH----H-------CCS-EEETTTCSSSC-CCHHHHHHHHHHCCCEE--EEES----S-------S-------
T ss_pred -HHHHHHHH----c-------CCC-EEEEccCCCCC-CCHHHHHHHHHcCCeEE--Eecc----C-------C-------
Confidence 01222222 2 455 5899776 1 12456777777887661 1121 0 1
Q ss_pred CCCChhcHHHHHHHHhcCC--ccEEcCCC
Q 015110 343 PIRDAANKEKLWEALMDGH--IDMLSSDH 369 (413)
Q Consensus 343 plr~~~~~~~L~~~l~~G~--i~~i~sDh 369 (413)
....+.+.++++++.|. ..+++|||
T Consensus 251 --~~~~~~~~~~~~~~~g~~d~v~lgTD~ 277 (386)
T 2vun_A 251 --NPKIADYVARRAAEKGQLGRVIFGNDA 277 (386)
T ss_dssp --CHHHHHHHHHHHHHHTCGGGEEEECCB
T ss_pred --cccccHHHHHHHHHcCCCceeEEecCC
Confidence 03456788999999999 56999999
No 30
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=99.90 E-value=3.6e-23 Score=206.87 Aligned_cols=274 Identities=16% Similarity=0.133 Sum_probs=162.8
Q ss_pred CcceEEEccEEEcCCC--c-eeeEEEE-ECCEEEEccc--CCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCC-C
Q 015110 42 YNQYWLTSKRIVTPKG--V-ISGAVEI-KEGNIISIVS--EEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-E 114 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~--~-~~~~V~I-~dG~I~~Ig~--~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~-~ 114 (413)
..+++|+|++|+++++ . .+++|+| +||||++|++ ....+ ++.++||++|++|+|||||+|+|+..++.. .
T Consensus 12 ~~~~li~n~~i~~~~~~~~~~~~~v~I~~~g~I~~Vg~~~~~~~~---~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~ 88 (458)
T 2p9b_A 12 EPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIP---AEYHYLDGTGKIVMPGLINAHTHLFSQGKPLN 88 (458)
T ss_dssp CCEEEEEEEEECCCTTCCEEEEEEEEECTTSBEEEEEEGGGCCCC---TTCEEEECTTCEEEECEEEEEECSCC------
T ss_pred CCcEEEEeeEEEeCCCCccccCcEEEEecCCEEEEEeccccCCCC---CCCeEEECCCCEEccceeeeeecccccccccc
Confidence 3578999999999875 3 3689999 9999999987 32211 356899999999999999999999865421 0
Q ss_pred ---------------cc----------chHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEee-
Q 015110 115 ---------------WE----------GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW- 168 (413)
Q Consensus 115 ---------------~e----------~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 168 (413)
+. .+...++.++++||||+++++ +..+ ....++...+.... ....+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~---~~~~~~~~~~~g~~-~g~r~~~~g 163 (458)
T 2p9b_A 89 PKLATPKGQRMVATFAHSPLGKPYMAATVKHNATTLLESGVTTIRTLG-DVGY---EVVTLRDQIDAGQI-LGPRILASG 163 (458)
T ss_dssp -----------------------CHHHHHHHHHHHHHHTTEEEEEESC-CSSS---HHHHHHHHHHTTSS-CCCEEECCC
T ss_pred ccccchhhhhhhhhhhhhcccccHHHHHHHHHHHHHHHcCCcEEEeCC-CCcc---ccHHHHHHHHcCCC-CCCeEEecc
Confidence 11 233467888999999999987 3221 11223222221110 00122111
Q ss_pred ------ceec-------CCc-hhhHHHHHHHHHcCCcEEEEeecCCC-------CCCCCCCCHHHHHHHHHHHHhcCCCE
Q 015110 169 ------GGLV-------PEN-AYNASALEALLNAGVLGLKSFMCPSG-------INDFPMTNASHIKEGLSVLARYKRPL 227 (413)
Q Consensus 169 ------~~~~-------~~~-~~~~~~l~~l~~~G~~~ik~~~~~~~-------~~~~~~~~~~~l~~~~~~A~~~g~~v 227 (413)
++.. ... .+..+.++++.+.|+..+|++..... ..+.+.++.++++++++.|+++|+++
T Consensus 164 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v 243 (458)
T 2p9b_A 164 PLMAIPEGHGAPLIALTSGTPEEARTAVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVIV 243 (458)
T ss_dssp SCEECCCSSCCCCEECCSCCHHHHHHHHHHHHHTTCSCEEEECSCCTTSCCCC------CCCHHHHHHHHHHHHHTTCCE
T ss_pred cccccCCCCCccccCccCCCHHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccCCCCCCcCCHHHHHHHHHHHHHCCCeE
Confidence 1100 011 12234456667788889998864210 01134578999999999999999999
Q ss_pred EEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHH
Q 015110 228 LVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLME 307 (413)
Q Consensus 228 ~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ 307 (413)
.+|+++... +..+++. |.. .+.|.... . -+.++.
T Consensus 244 ~~H~~~~~~--------------------------------i~~~~~~-----------G~~-~i~H~~~~-~-~~~~~~ 277 (458)
T 2p9b_A 244 GAHAQSPEG--------------------------------VRRSLLA-----------GVD-TIEHGSVL-D-DELIGM 277 (458)
T ss_dssp EEEECSHHH--------------------------------HHHHHHH-----------TCS-EEEECCCC-C-HHHHHH
T ss_pred EEEeCCHHH--------------------------------HHHHHHc-----------CCC-EEEECCCC-C-HHHHHH
Confidence 999975432 2222322 222 46666543 1 235666
Q ss_pred HH------HCCCCEEEEcccc--ccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCccEEcCCCC
Q 015110 308 AK------TNGDSITVETCPH--YLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHS 370 (413)
Q Consensus 308 ak------~~G~~v~~e~~p~--~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~ 370 (413)
++ +.|+.+.+...|. ++.+..... .........+|.|....+..+++.+++|+.+++||||.
T Consensus 278 ~~~~~~~~~~g~~v~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gtD~~ 347 (458)
T 2p9b_A 278 FRHNPNALRGYSALIPTLSAGLPLTLLGQDVT-GITDIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTG 347 (458)
T ss_dssp HHCCTTSTTSCCEEECCHHHHHHHHHSCHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCCCTT
T ss_pred HhcccccccCCeEEEeecchhhHHHhhhcccc-cCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCC
Confidence 77 7887664444321 222221000 00001111234455566788999999999999999984
No 31
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=99.90 E-value=1.5e-22 Score=203.74 Aligned_cols=172 Identities=21% Similarity=0.276 Sum_probs=134.5
Q ss_pred CcceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCC---------CCCCCCcEEecCCCEEeeeeeecccccCCCCC
Q 015110 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP---------RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~---------~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~ 112 (413)
.++++|+|++|+|+.+...++|+|+||||++|++..... ...++.++||++|++|+|||||+|+|+..++.
T Consensus 66 ~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~Pg~ 145 (570)
T 4ubp_C 66 VLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINPDQ 145 (570)
T ss_dssp BCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCTTH
T ss_pred CCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEEcccCCCCcch
Confidence 468999999999988777899999999999999753210 00136789999999999999999999987642
Q ss_pred CCccchHHHHHHHHhCCceEEEe-------CCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHH
Q 015110 113 TEWEGFPSGTKAAAAGGITTLID-------MPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEAL 185 (413)
Q Consensus 113 ~~~e~~~~~~~~al~~GvTTv~d-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 185 (413)
.++++++||||+++ ++ ++.|.......++..++.+. ...+++++++.... ...+++.++
T Consensus 146 ---------~~aAl~gGvTTvv~gg~~p~~~~-n~~p~~~~~~~l~~~l~aa~-~~~v~~~~~g~~~~---~~l~el~el 211 (570)
T 4ubp_C 146 ---------VDVALANGITTLFGGGTGPAEGS-KATTVTPGPWNIEKMLKSTE-GLPINVGILGKGHG---SSIAPIMEQ 211 (570)
T ss_dssp ---------HHHHHHTTEEEEEEECCSSCHHH-HHSSCCCHHHHHHHHHHHHT-TCSSEEEEEEECCC---SSHHHHHHH
T ss_pred ---------HHHHHhcCCeEEEecCccccccC-CCcCCCCcHHHHHHHHHHhh-hCCeeEEEEeccCC---cCHHHHHHH
Confidence 37899999999995 33 33344445566666655554 45689988875433 246788889
Q ss_pred HHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015110 186 LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME 234 (413)
Q Consensus 186 ~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~ 234 (413)
.+.|+.++|.++.+ ..+++.+++++++|+++|+++.+|+++.
T Consensus 212 ~~aGa~gfK~~~~~-------~~~~~~L~~aL~~A~~~g~~V~iHae~l 253 (570)
T 4ubp_C 212 IDAGAAGLKIHEDW-------GATPASIDRSLTVADEADVQVAIHSDTL 253 (570)
T ss_dssp HHHTCCEEEEEGGG-------CCCHHHHHHHHHHHHHHTCEEEEECCTT
T ss_pred HHcCCCeEeeccCC-------CCCHHHHHHHHHHHHHcCCEEEEEcCCc
Confidence 99999999998643 3588999999999999999999999854
No 32
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=99.90 E-value=1.5e-22 Score=203.74 Aligned_cols=172 Identities=21% Similarity=0.276 Sum_probs=134.5
Q ss_pred CcceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCC---------CCCCCCcEEecCCCEEeeeeeecccccCCCCC
Q 015110 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP---------RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~---------~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~ 112 (413)
.++++|+|++|+|+.+...++|+|+||||++|++..... ...++.++||++|++|+|||||+|+|+..++.
T Consensus 66 ~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~Pg~ 145 (570)
T 4ac7_C 66 VLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINPDQ 145 (570)
T ss_dssp BCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCTTH
T ss_pred CCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEecccccCCcch
Confidence 468999999999988777899999999999999753210 00136789999999999999999999987642
Q ss_pred CCccchHHHHHHHHhCCceEEEe-------CCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHH
Q 015110 113 TEWEGFPSGTKAAAAGGITTLID-------MPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEAL 185 (413)
Q Consensus 113 ~~~e~~~~~~~~al~~GvTTv~d-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 185 (413)
.++++++||||+++ ++ ++.|.......++..++.+. ...+++++++.... ...+++.++
T Consensus 146 ---------~~aAl~gGvTTvv~gg~~p~~~~-n~~p~~~~~~~l~~~l~aa~-~~~v~~~~~g~~~~---~~l~el~el 211 (570)
T 4ac7_C 146 ---------VDVALANGITTLFGGGTGPAEGS-KATTVTPGPWNIEKMLKSTE-GLPINVGILGKGHG---SSIAPIMEQ 211 (570)
T ss_dssp ---------HHHHHHTTEEEEEEECSSSCHHH-HHSSCCCHHHHHHHHHHHHT-TCSSEEEEEEECCC---SSHHHHHHH
T ss_pred ---------HHHHHhcCCeEEEecCcCccccc-CCcCcCCcHHHHHHHHHHhh-hCCeeEEEEeccCC---cCHHHHHHH
Confidence 37899999999995 33 33344445556666655554 45689988875433 246788889
Q ss_pred HHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015110 186 LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME 234 (413)
Q Consensus 186 ~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~ 234 (413)
.+.|+.++|.++.+ ..+++.+++++++|+++|+++.+|+++.
T Consensus 212 ~~aGa~gfK~~~~~-------~~~~~~L~~aL~~A~~~g~~V~iHae~l 253 (570)
T 4ac7_C 212 IDAGAAGLKIHEDW-------GATPASIDRSLTVADEADVQVAIHSDTL 253 (570)
T ss_dssp HHHTCCEEEEEGGG-------CCCHHHHHHHHHHHHHHTCEEEEECCTT
T ss_pred HHcCCCeEeeccCC-------CCCHHHHHHHHHHHHHcCCEEEEEcCCc
Confidence 99999999998643 3588999999999999999999999854
No 33
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=99.89 E-value=2e-21 Score=195.21 Aligned_cols=278 Identities=15% Similarity=0.141 Sum_probs=152.4
Q ss_pred cCCCCcceEEEccEEE-cCC--C--ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCC
Q 015110 38 SLLPYNQYWLTSKRIV-TPK--G--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112 (413)
Q Consensus 38 ~~~~~~~lli~n~~vi-~~~--~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~ 112 (413)
+..+|++++|+|++++ +++ . ..+++|+|+||||++|++..+.+ .++.++||++|++|+|||||+|+|+.....
T Consensus 24 ~~~~m~~~li~n~~vv~t~d~~~~~~~~~~V~I~~g~I~~Vg~~~~~~--~~~~~viD~~g~~v~PGlID~H~Hl~~~~~ 101 (479)
T 3h4u_A 24 SSSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELP--ETADEVLDLRGHLVIPGLVNTHHHMYQSLT 101 (479)
T ss_dssp -----CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSC--SCCSEEEECTTEEEEECEEECCCCGGGGGS
T ss_pred ccchhhhheeECCeEEEeeCCCCceecccEEEEECCEEEEEeCCcccC--CCCCeEEeCCCCEEecceeecccccchhhh
Confidence 4456789999999976 333 3 24899999999999999865432 246789999999999999999999975422
Q ss_pred C------------------------CccchH----HHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeee
Q 015110 113 T------------------------EWEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 164 (413)
Q Consensus 113 ~------------------------~~e~~~----~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (413)
. +.++++ .....++++||||++++. ...+.....+......+....+....
T Consensus 102 rg~~~~~~~~l~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~g~r~~~~ 180 (479)
T 3h4u_A 102 RAVPAAQNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHL-YIYPNGSRLDDSIGAAQRIGMRFHAS 180 (479)
T ss_dssp CSCTTTTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCB-CCCCTTCCHHHHHHHHHHHTCEEEEE
T ss_pred ccccccCCCCHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhCCeEEEEECc-cccCCcchHHHHHHHHHHcCCEEEEE
Confidence 1 111121 245667899999999985 22222222222222222221121121
Q ss_pred EEeec------eecC-----CchhhHHHHHHHHHcC-----CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEE
Q 015110 165 VGFWG------GLVP-----ENAYNASALEALLNAG-----VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLL 228 (413)
Q Consensus 165 ~~~~~------~~~~-----~~~~~~~~l~~l~~~G-----~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~ 228 (413)
..... +..+ ...+.+++++++++.. ...++..+.+.. ...++.++++++++.|+++|++++
T Consensus 181 ~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~e~l~~~~~~A~~~g~~v~ 257 (479)
T 3h4u_A 181 RGAMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCS---PFSVSRDLMRDAAVLAREYGVSLH 257 (479)
T ss_dssp EEECC----------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESC---TTSSCHHHHHHHHHHHHHHTCEEE
T ss_pred eeecccccccccCCcccccccHHHHHHHHHHHHHHhhccCCCCceEEEEecCC---CCCCCHHHHHHHHHHHHhcCCCEE
Confidence 11110 0001 1122344555554321 112344444322 235789999999999999999999
Q ss_pred Eec-CChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHH
Q 015110 229 VHA-EMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLME 307 (413)
Q Consensus 229 ~H~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ 307 (413)
+|+ ++...+...+...+ . .. ++...+.+ ..+.+..+.|+... . -+.++.
T Consensus 258 ~H~~e~~~~~~~~~~~~g-------------~-------~~----~~~~~~~g----~~~~~~~i~H~~~~-~-~~~~~~ 307 (479)
T 3h4u_A 258 THLAENVNDIAYSREKFG-------------M-------TP----AEYAEDLG----WVGHDVWHAHCVQL-D-DAGIGL 307 (479)
T ss_dssp EEESCSHHHHHC---------------------------CH----HHHHHHTT----CCSTTEEEEECTTC-C-HHHHHH
T ss_pred EEeCCCHHHHHHHHHHcC-------------C-------CH----HHHHHHcC----CCCCCeEEEEecCC-C-HHHHHH
Confidence 998 44433221111000 0 01 22222222 12556777887643 1 123444
Q ss_pred HHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCccEEcCCCCCC
Q 015110 308 AKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT 372 (413)
Q Consensus 308 ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p~ 372 (413)
+++.| +.+.+||..-..- ..+ .+| +.+.++.|...++|||+.+.
T Consensus 308 l~~~g--~~v~~~p~s~~~l-----~~~-----~~~---------~~~~~~~Gv~v~lgtD~~~~ 351 (479)
T 3h4u_A 308 FARTG--TGVAHCPCSNMRL-----ASG-----IAP---------VKKMRLAGVPVGLGVDGSAS 351 (479)
T ss_dssp HHHHT--CEEEECHHHHHHT-----TCC-----CCC---------HHHHHHTTCCEEECCCCTTS
T ss_pred HHHcC--CeEEEChhHhhhc-----CCC-----CCC---------HHHHHHCCCeEEEeCCCCcc
Confidence 44455 4555788632111 001 222 45566779999999998654
No 34
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=99.89 E-value=3.4e-22 Score=201.51 Aligned_cols=185 Identities=18% Similarity=0.163 Sum_probs=115.5
Q ss_pred CCcceEEEccE-EEcCCC--------ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCC-
Q 015110 41 PYNQYWLTSKR-IVTPKG--------VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP- 110 (413)
Q Consensus 41 ~~~~lli~n~~-vi~~~~--------~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~- 110 (413)
++++++|+|++ |++++. ..+++|+|+||||++|++... . ++.++||++|++|+|||||+|+|+..+
T Consensus 8 ~~~~~li~n~~~i~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-~---~~~~viD~~G~~v~PG~ID~H~H~~~~~ 83 (492)
T 2paj_A 8 TQPSTLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAP-R---PGETIVDATDCVIYPAWVNTHHHLFQSL 83 (492)
T ss_dssp --CEEEEECBSEEBCCCCSSSSSCSBCCCCCEEEETTEEEEESSCCC-C---TTCEEEECBTCEEEECEECCCCCGGGGG
T ss_pred CCCCeEEECCEEEEecCCccccccceecccEEEEECCEEEEEcCCCC-C---CCCeEEECCCcEEeeCccccccChhhHh
Confidence 34589999999 999862 347899999999999997642 1 356899999999999999999998754
Q ss_pred --CC--------CC--------------ccchHHHHHH----HHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCe
Q 015110 111 --GR--------TE--------------WEGFPSGTKA----AAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY 162 (413)
Q Consensus 111 --~~--------~~--------------~e~~~~~~~~----al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
+. .. .++++..++. ++++||||+++++ +..+.....+.++...+......
T Consensus 84 ~~g~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~g- 161 (492)
T 2paj_A 84 LKGEPAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHN-YVYYPGMPFDSSAILFEEAEKLG- 161 (492)
T ss_dssp CCSCC-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECC-CCCCTTCSSCHHHHHHHHHHHTT-
T ss_pred hcCccCCCCCCHHHHHHhcccchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEech-hhcccccccchHHHHHHHHHHcC-
Confidence 21 11 1344444444 8999999999997 33332211223333333322211
Q ss_pred eeEEeeceec--C--------------CchhhHHHHHHHHHc--CC---cEEEEeecCCCCCCC-CCCCHHHHHHHHHHH
Q 015110 163 VDVGFWGGLV--P--------------ENAYNASALEALLNA--GV---LGLKSFMCPSGINDF-PMTNASHIKEGLSVL 220 (413)
Q Consensus 163 ~~~~~~~~~~--~--------------~~~~~~~~l~~l~~~--G~---~~ik~~~~~~~~~~~-~~~~~~~l~~~~~~A 220 (413)
+...+..+.. + ...+.+++++++++. +. ..++.++.+.+ . +.++.++++++++.|
T Consensus 162 ~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~a 238 (492)
T 2paj_A 162 LRFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTT---VLYSISPREMRETAAVA 238 (492)
T ss_dssp CEEEEEECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTT---TTTSSCHHHHHHHHHHH
T ss_pred CEEEEEchhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCCCceEEEEeccc---CCCCCCHHHHHHHHHHH
Confidence 1111111110 0 001234555555542 21 13566655532 2 357899999999999
Q ss_pred HhcCCCEEEecCCh
Q 015110 221 ARYKRPLLVHAEME 234 (413)
Q Consensus 221 ~~~g~~v~~H~e~~ 234 (413)
+++|+++.+|+.+.
T Consensus 239 ~~~g~~v~~H~~~~ 252 (492)
T 2paj_A 239 RRLGLRMHSHLSET 252 (492)
T ss_dssp HHTTCEEEEECC--
T ss_pred HHcCCcEEEEeCCC
Confidence 99999999999653
No 35
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=99.89 E-value=5.3e-23 Score=203.38 Aligned_cols=184 Identities=18% Similarity=0.166 Sum_probs=113.0
Q ss_pred CCCcceEEEccEEEcCCC-c-eeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCC------
Q 015110 40 LPYNQYWLTSKRIVTPKG-V-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG------ 111 (413)
Q Consensus 40 ~~~~~lli~n~~vi~~~~-~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~------ 111 (413)
.+|++++|+|++|+++++ . .+++|+|+||||++|++....+...++.++||++ ++|+|||||+|+|+..+.
T Consensus 34 ~~~~~~li~n~~v~~~~~~~~~~~~V~I~~g~I~~vg~~~~~~~~~~~~~viD~~-~~v~PGlID~H~H~~~~~~~g~~~ 112 (420)
T 2imr_A 34 DAHTPRLLTCDVLYTGMGGAQSPGGVVVVGETVAAAGHPDELRRQYPHAAEERAG-AVIAPPPVNAHTHLDMSAYEFQAL 112 (420)
T ss_dssp --CCEEEEEESEEECC---EESSEEEEEETTEEEEEECHHHHHHHCTTCEEEECC-SEESSCCCEEEEESSCCHHHHHHC
T ss_pred cccccEEEECCEEEeCCCCeeeccEEEEECCEEEEecCcccccccCCCCeeecCC-eEECCCCEecCcCcchhhhhhccC
Confidence 556789999999999874 2 4789999999999998743210001246899999 999999999999997641
Q ss_pred -CCCc--------------cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcC---CeeeEEeeceecC
Q 015110 112 -RTEW--------------EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR---IYVDVGFWGGLVP 173 (413)
Q Consensus 112 -~~~~--------------e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 173 (413)
+..| ......++.++++||||++|++ +. .+.++. ..... ....+.+. +..+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~------~~~~~~---~~~~~g~r~~~~~~~~-~~~~ 181 (420)
T 2imr_A 113 PYFQWIPEVVIRGRHLRGVAAAQAGADTLTRLGAGGVGDIV-WA------PEVMDA---LLAREDLSGTLYFEVL-NPFP 181 (420)
T ss_dssp HHHHTSHHHHHHHTTCCHHHHHHHHHHHHHHTTCCCEEEEE-CS------HHHHHH---HHTCTTCCEEEEEEEC-BCCG
T ss_pred CHHHHHHHhhhhhhhccCHHHHHHHHHHHHhcCcEEEEEcc-CC------HHHHHH---HHHhcCcEEEEEeeec-CCCc
Confidence 0011 1123456788999999999987 21 233332 12211 12222221 1111
Q ss_pred Cc-hhhHHH----HHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChhhch
Q 015110 174 EN-AYNASA----LEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKGSE 238 (413)
Q Consensus 174 ~~-~~~~~~----l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e~~~~~~ 238 (413)
.. .+..++ ++++.+.+...++.++++.. .+.++.++++++++.|+++|+++++|+ ++.+.+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~ 249 (420)
T 2imr_A 182 DKADEVFAAARTHLERWRRLERPGLRLGLSPHT---PFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELE 249 (420)
T ss_dssp GGHHHHHHHHHHHHHHHHTTCBTTEEEEEEECC---SSSBCHHHHHHHHHHHHHHTCCBEEEESCSHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhcccCCceEEEecCCc---CCCcCHHHHHHHHHHHHHCCCcEEEEeCCCHHHHH
Confidence 10 011223 23333323344566665542 235689999999999999999999998 4544443
No 36
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=99.88 E-value=1.5e-21 Score=191.49 Aligned_cols=258 Identities=13% Similarity=0.084 Sum_probs=156.8
Q ss_pred CcceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCC---------
Q 015110 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--------- 112 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~--------- 112 (413)
+.+++|+|++|+++.+. ++|+|+||||++|++.... ++.++||++|++|+|||||+|+|+..+..
T Consensus 4 ~~~~li~n~~v~~~~~~--~~v~I~~g~I~~vg~~~~~----~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~ 77 (403)
T 2qt3_A 4 DFDLIIRNAYLSEKDSV--YDIGIVGDRIIKIEAKIEG----TVKDEIDAKGNLVSPGFVDAHTHMDKSFTSTGERLPKF 77 (403)
T ss_dssp CEEEEEEEEEETTTTEE--EEEEEETTEEEEEESSCCS----CEEEEEECTTCBEEECEEEEEECGGGTTTTCSSSSCTT
T ss_pred ccceEEEeeEecCCCee--EEEEEECCEEEEeecCCCC----CccceEcCCCCEecccceeeeeccchhhcccccccccc
Confidence 46899999999987643 8999999999999976432 24579999999999999999999975432
Q ss_pred -CC-------------------ccchH----HHHHHHHhCCceEEEeCCCCCCCCC--CcHHHHHHHHHHHhcCCeeeEE
Q 015110 113 -TE-------------------WEGFP----SGTKAAAAGGITTLIDMPLNSDPST--ISTETLKLKVDAAEKRIYVDVG 166 (413)
Q Consensus 113 -~~-------------------~e~~~----~~~~~al~~GvTTv~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 166 (413)
.. .++++ ...+.++++||||++++. +..+.. ...+.+....+... ...+..
T Consensus 78 ~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 154 (403)
T 2qt3_A 78 WSRPYTRDAAIEDGLKYYKNATHEEIKRHVIEHAHMQVLHGTLYTRTHV-DVDSVAKTKAVEAVLEAKEELK--DLIDIQ 154 (403)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEE-ECSTTTTTHHHHHHHHHHHHHT--TTCEEE
T ss_pred cCCCcccCcCHHHHHHHhhhcCHHHHHHHHHHHHHHHHHcCCcEEEEEE-cccCccccchHHHHHHHHHHhh--cceeEE
Confidence 11 01112 145678999999998765 222211 11222222222222 222222
Q ss_pred eec---eecCCchhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhh
Q 015110 167 FWG---GLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKL 243 (413)
Q Consensus 167 ~~~---~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~ 243 (413)
... .......+..+.++++.+.|+..++. +.+. .....+.++++++++.|+++|+++++|+......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~p~---~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~------ 224 (403)
T 2qt3_A 155 VVAFAQSGFFVDLESESLIRKSLDMGCDLVGG-VDPA---TRENNVEGSLDLCFKLAKEYDVDIDYHIHDIGTV------ 224 (403)
T ss_dssp EEEECTTCTTTSTTHHHHHHHHHHTTCSEEEC-BCTT---TTTSCHHHHHHHHHHHHHHTTCEEEEEECCCHHH------
T ss_pred EEEcCCcccccCcchHHHHHHHHhcCCCeEEE-ecCC---CCCCChHHHHHHHHHHHHHcCCCeEEEeCCcccc------
Confidence 110 00011223356677777777755442 2222 1223456899999999999999999998543210
Q ss_pred ccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhH------HHHHHHHHHCCCCEEE
Q 015110 244 EDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSS------LDLLMEAKTNGDSITV 317 (413)
Q Consensus 244 ~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~------~~~i~~ak~~G~~v~~ 317 (413)
...+++.+++.+++.+. +.++.+.|+... .. -+.++..++.|+.++
T Consensus 225 ---------------------~~~~~~~~~~~~~~~g~-----~~~~~i~H~~~~-~~~~~~~~~~~~~~l~~~g~~v~- 276 (403)
T 2qt3_A 225 ---------------------GVYSINRLAQKTIENGY-----KGRVTTSHAWCF-ADAPSEWLDEAIPLYKDSGMKFV- 276 (403)
T ss_dssp ---------------------HHHHHHHHHHHHHHTTC-----TTSEEEEECTHH-HHSCHHHHHHHHHHHHHHTCEEE-
T ss_pred ---------------------hhHHHHHHHHHHHHcCC-----CCCeEEEehhhh-ccCChhhHHHHHHHHHHcCCEEE-
Confidence 01244555665554321 346889998764 21 255666666665544
Q ss_pred EccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCccEEcCCCC
Q 015110 318 ETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHS 370 (413)
Q Consensus 318 e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~ 370 (413)
.||. ++. ....+++.++.|+..+++||+.
T Consensus 277 -~~p~---------------------~~~--~~~~~~~~~~~Gv~v~lgtD~~ 305 (403)
T 2qt3_A 277 -TCFS---------------------STP--PTMPVIKLLEAGINLGCASDNI 305 (403)
T ss_dssp -EETT---------------------TCC--TTCCHHHHHHTTCEEEEECCSC
T ss_pred -ECCC---------------------CCC--CCCCHHHHHHcCCcEEEeCCCC
Confidence 5662 010 0112455677799999999995
No 37
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=99.88 E-value=9.6e-22 Score=194.09 Aligned_cols=188 Identities=17% Similarity=0.163 Sum_probs=117.8
Q ss_pred CCCCcceEEEccEEEcCCC--c-eeeEEEEECCEEEEcccCCCCCCCCCCC--cEEecCCCEEeeeeeecccccCCCCC-
Q 015110 39 LLPYNQYWLTSKRIVTPKG--V-ISGAVEIKEGNIISIVSEEDWPRNSKTG--QVVDYGEAVIMPGLIDVHAHLDDPGR- 112 (413)
Q Consensus 39 ~~~~~~lli~n~~vi~~~~--~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~--~vID~~G~~vlPGlID~H~H~~~~~~- 112 (413)
..+.++++|+|++|+++++ . .+++|+|+||||++|++.. .+ ++. ++||++|++|+|||||+|+|+.....
T Consensus 3 ~~~~~~~li~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~-~~---~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~ 78 (418)
T 2qs8_A 3 LDVDSKTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGF-IS---SNDFEDYIDLRDHTVLPGLMDMHVHFGQEYQS 78 (418)
T ss_dssp ----CCEEEEEEEECCSSCSSCEEEEEEEEETTEEEEEEESC-CC---CTTSSEEEEEEEEEEEECEEEEEECTTCCCCC
T ss_pred CCCCccEEEEeeEEEeCCCCccccCcEEEEECCEEEEEeCCC-CC---CCCcceEEECCCCEECCCeeeeeeccccCCCC
Confidence 4455689999999999876 3 4689999999999999754 21 356 89999999999999999999986532
Q ss_pred CCc-------cch----HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcC-CeeeE-----Eeecee----
Q 015110 113 TEW-------EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR-IYVDV-----GFWGGL---- 171 (413)
Q Consensus 113 ~~~-------e~~----~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~---- 171 (413)
..| +.. ...++.++++||||++|++ +..+ ....++...+..... ..+-. ...++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~---~~~~~~~~~~~g~~~~~r~~~~~~~~~~~g~~~~~~ 154 (418)
T 2qs8_A 79 KAQAPIKVEREMQAILATQHAYVTFKSGFTTVRQVG-DSGL---VAISLRDAINSGKLAGPRIFAAGKTIATTGGHADPT 154 (418)
T ss_dssp TTTSCSCCCHHHHHHHHHHHHHHHHHTTEEEEEECC-CSSS---HHHHHHHHHHTTSSCCCEEEECCSCBEETTCTTCTT
T ss_pred CchhhhcCCHHHHHHHHHHHHHHHHHcCCCEEEeCC-CCcc---ccHHHHHHHHCCCCCCCeEEecCccccccCCCcccc
Confidence 111 111 1256788999999999986 2211 112233222211100 01100 000000
Q ss_pred -----------------cCCchhhHHHHHHHHHcCCcEEEEeecCCC-----CCCCCCCCHHHHHHHHHHHHhcCCCEEE
Q 015110 172 -----------------VPENAYNASALEALLNAGVLGLKSFMCPSG-----INDFPMTNASHIKEGLSVLARYKRPLLV 229 (413)
Q Consensus 172 -----------------~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~-----~~~~~~~~~~~l~~~~~~A~~~g~~v~~ 229 (413)
.....+..+.+++..+.|+..+|+++...- ..+.+.++.++++++++.|+++|+++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~ 234 (418)
T 2qs8_A 155 NGKAVDDYDYPVPEQGVVNGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAV 234 (418)
T ss_dssp TTCCGGGCCCCCGGGTEECSHHHHHHHHHHHHHHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHHHHHHHHTTCEEEE
T ss_pred ccccccccccccccccccCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 000011223344445578889999864321 0122457899999999999999999999
Q ss_pred ecCCh
Q 015110 230 HAEME 234 (413)
Q Consensus 230 H~e~~ 234 (413)
|+++.
T Consensus 235 H~~~~ 239 (418)
T 2qs8_A 235 HAHGA 239 (418)
T ss_dssp EECSH
T ss_pred EECCH
Confidence 99653
No 38
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=99.88 E-value=2.1e-21 Score=194.53 Aligned_cols=271 Identities=14% Similarity=0.101 Sum_probs=153.8
Q ss_pred CCCCcceEEEccEEEcCCCc----------eeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccC
Q 015110 39 LLPYNQYWLTSKRIVTPKGV----------ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD 108 (413)
Q Consensus 39 ~~~~~~lli~n~~vi~~~~~----------~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~ 108 (413)
..++++++|+|++|+++++. .+++|+|+||||++|++.... ..++.++||++|++|+|||||+|+|+.
T Consensus 19 ~~~~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~--~~~~~~viD~~g~~v~PGlID~H~H~~ 96 (468)
T 3lnp_A 19 PKAHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSSC--QIPATETLDLGQQVLMPGWVNAHGHAA 96 (468)
T ss_dssp --CCEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTTC--CCCEEEEEECCSEEEEECEEECSCCGG
T ss_pred CCccccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCccc--cCCCCeEEeCCCcEEEeCeechhhChh
Confidence 44457899999999986532 388999999999999986541 124678999999999999999999995
Q ss_pred CC---CC---------------------CCccch----HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcC
Q 015110 109 DP---GR---------------------TEWEGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR 160 (413)
Q Consensus 109 ~~---~~---------------------~~~e~~----~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (413)
+. +. .+.+++ ......++++||||++|++. . .+.+....+....+
T Consensus 97 ~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~-~------~~~~~~~~~~~g~r 169 (468)
T 3lnp_A 97 MSLFRGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMYF-Y------PQQSGEAALAAGIR 169 (468)
T ss_dssp GGGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECCS-C------HHHHHHHHHHHTCE
T ss_pred hhhhccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc-C------HHHHHHHHHHcCCe
Confidence 32 11 111112 23455679999999999852 1 22222222222212
Q ss_pred CeeeEEeecee---cCCchhhHHHHHHHHHc--CCc-----EEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEe
Q 015110 161 IYVDVGFWGGL---VPENAYNASALEALLNA--GVL-----GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVH 230 (413)
Q Consensus 161 ~~~~~~~~~~~---~~~~~~~~~~l~~l~~~--G~~-----~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 230 (413)
..+.+.....- .....+.++...++++. +.. .++..+++.. .+.++.++++++++.|+++|+++++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~~H 246 (468)
T 3lnp_A 170 AVCFAPVLDFPTNYAQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHA---PYTVSDEPLKEITMLSDQLDMPVQIH 246 (468)
T ss_dssp EEEEEEECSSCCSSCSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEECC---TTTSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEEeccccCCCcccccCHHHHHHHHHHHHHHhhcCCcccCceEEEEEEcCC---CCCCCHHHHHHHHHHHHHcCCcEEEE
Confidence 22222221100 01112233444444331 322 4455444432 24578999999999999999999999
Q ss_pred cCCh-hhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHH
Q 015110 231 AEME-KGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAK 309 (413)
Q Consensus 231 ~e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak 309 (413)
+.+. +.+...+...+ . +.++...+.+ ..+.+..+.|+... . -+.++.++
T Consensus 247 ~~e~~~~~~~~~~~~g-------------~-----------~~i~~~~~~g----~l~~~~~~~H~~~~-~-~~~~~~l~ 296 (468)
T 3lnp_A 247 LHETDFEVSESLETFN-------------K-----------RPTQRLADIG----FLNERVSCVHMTQV-D-DGDIKILQ 296 (468)
T ss_dssp ESCSHHHHHHHHHHHS-------------S-----------CHHHHHHHTT----CCSTTEEEEECCSC-C-HHHHHHHH
T ss_pred eCCCHHHHHHHHHHhC-------------C-----------CHHHHHHHcC----CCCCCeEEEeccCC-C-HHHHHHHH
Confidence 8443 33322221111 0 0122222222 12456677777643 1 12344455
Q ss_pred HCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCccEEcCCCCCC
Q 015110 310 TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT 372 (413)
Q Consensus 310 ~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p~ 372 (413)
+.|+ .+.+||..-... ..+ .+| +.+.++.|...+++||+.+.
T Consensus 297 ~~g~--~v~~~p~s~~~~-----~~~-----~~~---------~~~~~~~Gv~v~lgtD~~~~ 338 (468)
T 3lnp_A 297 KTGA--SIIHCPESNLKL-----ASG-----FCP---------IAKLSAANIPLAIGTDGAAS 338 (468)
T ss_dssp HHCC--EEEECHHHHHHT-----TCC-----CCC---------HHHHHHTTCCEEECCCCTTS
T ss_pred hcCC--EEEEChhhhhhc-----CCC-----CCC---------HHHHHHCCCeEEEECCCCcC
Confidence 5554 455788522110 001 122 45567779999999998654
No 39
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=99.88 E-value=2.9e-22 Score=210.97 Aligned_cols=175 Identities=22% Similarity=0.266 Sum_probs=126.4
Q ss_pred CcceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCC---------CCCCCCCcEEecCCCEEeeeeeecccccCCCCC
Q 015110 42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDW---------PRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~---------~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~ 112 (413)
..|++|+|++|+|+++..++||.|+||||++||+...+ ....++.+|||++|++|+|||||+|+|+..+.
T Consensus 336 ~~DLVItNA~IVD~tGi~kADI~IkDGRIaAIGkagnpD~~dgV~pdl~ig~gtEVIDA~GkiVtPGfID~HvHl~~P~- 414 (840)
T 4gy7_A 336 SLDTVITNAVIIDYTGIIKADIGIKDGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGLIVTAGAIDCHVHYICPQ- 414 (840)
T ss_dssp SCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTSBCCTTCEEEECTTCEEEECEEEEEEECCCTH-
T ss_pred cCCEEEeCeEEECCCCeEEeeEEEECCEEEEEeccCCcccccccccccccCCCCEEEECCCCEEccCeeeeccCCCCCC-
Confidence 35999999999999988899999999999999963211 00124789999999999999999999987642
Q ss_pred CCccchHHHHHHHHhCCceEEEeCCCCCC------CCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHH
Q 015110 113 TEWEGFPSGTKAAAAGGITTLIDMPLNSD------PSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL 186 (413)
Q Consensus 113 ~~~e~~~~~~~~al~~GvTTv~d~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 186 (413)
....++.+||||+++...... ........+....... ....+++++..... ....+.++++.
T Consensus 415 --------~~~eALasGVTTvv~gGtgp~~~~~~~~~~~~~~~~~~~l~a~-~~~~vn~g~~~~~~---~~~~~~L~el~ 482 (840)
T 4gy7_A 415 --------LVYEAISSGITTLVGGGTGPAAGTRATTCTPSPTQMRLMLQST-DDLPLNFGFTGKGS---SSKPDELHEII 482 (840)
T ss_dssp --------HHHHHHHHTEEEEEEECSSSCHHHHHSSCCCSHHHHHHHHHHT-TTSSSEEEEEEECC---CSSSHHHHHHH
T ss_pred --------chHHHHHhhHHHHHhCCCceecCcccccccchHHHHHHHHhhh-hcceeEEEEeCCCC---cccHHHHHHhh
Confidence 345678999999998752210 0111223333333222 23445666554322 22346788888
Q ss_pred HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhh
Q 015110 187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG 236 (413)
Q Consensus 187 ~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~ 236 (413)
+.|+.++|.+..+ ..+++.+..+++.++++|..+++|+++...
T Consensus 483 ~aGa~g~K~~~~~-------~~t~~~i~~aL~~A~e~g~~V~ih~e~~~~ 525 (840)
T 4gy7_A 483 KAGAMGLKLHEDW-------GSTPAAIDNCLTIAEHHDIQINIHTDTLNE 525 (840)
T ss_dssp HHTCSEEEEETTT-------CCCHHHHHHHHHHHHHHTCEEEEECCTTCS
T ss_pred hceeeEEEecccc-------CCCHHHHHHHHHHHHHhCCEEEEeccCcch
Confidence 8999999997543 357889999999999999999999987654
No 40
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=99.87 E-value=1.8e-21 Score=193.32 Aligned_cols=273 Identities=19% Similarity=0.151 Sum_probs=151.2
Q ss_pred CCCCcceEEEccEEEcCCC-----ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCC---
Q 015110 39 LLPYNQYWLTSKRIVTPKG-----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP--- 110 (413)
Q Consensus 39 ~~~~~~lli~n~~vi~~~~-----~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~--- 110 (413)
..+|.+++|+|++|++++. ..+++|+|+||||++|++....+ .++.++||++|++|+|||||+|+|+...
T Consensus 5 ~~~m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~~--~~~~~viD~~G~~v~PGlID~H~H~~~~~~~ 82 (439)
T 2i9u_A 5 EKDINLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPDK--YKGNPIIDFRNNIIIPGMNDLHAHASQYKNL 82 (439)
T ss_dssp ----CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCGG--GTTSCEEEEEEEEEEECEEEEEEEGGGGGGT
T ss_pred cCCcccEEEEeeEEEecCCccceEEeccEEEEECCEEEEeccccccc--CCCceEEcCCCeEEEecceecccccchHhhh
Confidence 3456789999999998762 24789999999999998643211 1245799999999999999999999753
Q ss_pred CCC---------------------CccchHH----HHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhc-CC--e
Q 015110 111 GRT---------------------EWEGFPS----GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RI--Y 162 (413)
Q Consensus 111 ~~~---------------------~~e~~~~----~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~-~~--~ 162 (413)
+.. +.++++. ..+.++++||||+++++ +. ..+.+...++.... .. .
T Consensus 83 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~-----~~~~~~~~~~~~~~~g~r~~ 156 (439)
T 2i9u_A 83 GIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFA-TL-----HKDSTIELFNMLIKSGIGAY 156 (439)
T ss_dssp TCCCSSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEEC-CS-----CHHHHHHHHHHHHHHTCEEE
T ss_pred CCcCCCCHHHHHHhcccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEcc-cc-----ccchHHHHHHHHHHcCCEEE
Confidence 111 0111221 23578999999999976 32 12222222222221 11 1
Q ss_pred eeEEeeceecC----Cc-hhhHHHHHHHHH---cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC-
Q 015110 163 VDVGFWGGLVP----EN-AYNASALEALLN---AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM- 233 (413)
Q Consensus 163 ~~~~~~~~~~~----~~-~~~~~~l~~l~~---~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~- 233 (413)
..........+ .. .+..++..++++ .+...++.++.+.. .+.++.+.++++++.|+++|+++.+|+.+
T Consensus 157 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 233 (439)
T 2i9u_A 157 VGKVNMDYNCPDYLTENYITSLNDTEEIILKYKDKSNIVKPIITPRF---VPSCSNELMDGLGKLSYKYRLPVQSHLSEN 233 (439)
T ss_dssp EECEECCSSCCTTSCCCHHHHHHHHHHHHHHHTTTCSSEEECBEECC---GGGCCHHHHHHHHHHHHHHTCCEEEEESCC
T ss_pred EEeeeccccCCcccchhHHHHHHHHHHHHHHHhCCCCceEEEEecCC---cCcCCHHHHHHHHHHHHhcCCcEEEeecCC
Confidence 11111110001 01 112333444443 23334566554421 13468999999999999999999999854
Q ss_pred hhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCC-ceEEEEccCChhhHHHHHHHHHHCC
Q 015110 234 EKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEG-AHLHIVHLSDASSSLDLLMEAKTNG 312 (413)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g-~~vhi~H~s~~~~~~~~i~~ak~~G 312 (413)
........... ..+|.. + +.+++.++ .+ .+..+.|.... . -+.++.+++.|
T Consensus 234 ~~~~~~~~~~~-------------~~~~~~-----~----~~~~~~g~----~~~~~~~i~H~~~~-~-~~~~~~l~~~g 285 (439)
T 2i9u_A 234 LDEIAVVKSLH-------------KKSNFY-----G----EVYDKFGL----FGNTPTLMAHCIHS-S-KEEINLIKRNN 285 (439)
T ss_dssp HHHHHHHHHHC-------------TTCSSH-----H----HHHHHTTC----SSSSCEEEEECCSC-C-HHHHHHHHHTT
T ss_pred hHHHHHHHHHh-------------CCCCCH-----H----HHHHHcCC----CCCCCeEEEEEecC-C-HHHHHHHHHcC
Confidence 33222111100 011111 1 11222221 13 44556665532 1 12445555666
Q ss_pred CCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCccEEcCCCCC
Q 015110 313 DSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP 371 (413)
Q Consensus 313 ~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p 371 (413)
+++.+||++-.. + +. ..|| +++.+++|++++++|||.+
T Consensus 286 --~~~~~~p~~~~~----l---~~---~~~~---------~~~~~~~Gv~~~lgtD~~~ 323 (439)
T 2i9u_A 286 --VTIVHCPTSNFN----L---GS---GMMP---------VRKYLNLGINVVLGSDISA 323 (439)
T ss_dssp --CEEEECHHHHHH----T---TC---CCCC---------HHHHHHTTCEEEECCCBTT
T ss_pred --CEEEECccchhh----c---cc---ccCC---------HHHHHHCCCcEEEecCCCC
Confidence 456689974211 0 10 1344 3456788999999999976
No 41
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=99.87 E-value=1.6e-21 Score=194.09 Aligned_cols=269 Identities=16% Similarity=0.140 Sum_probs=156.9
Q ss_pred CcceEEEccEEEcCCC----ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCC---CCC-
Q 015110 42 YNQYWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---GRT- 113 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~----~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~---~~~- 113 (413)
+++++|+|++|+++++ ..+++|+|+||||++|++..+.+ ..++.++||++|++|+|||||+|+|+... +..
T Consensus 5 ~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~-~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~~ 83 (447)
T 4f0r_A 5 RYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAA-GLEADERLELPDHVLMPGLINLHGHSAMSLLRGLAD 83 (447)
T ss_dssp CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHT-TSCEEEEEEEEEEEEEECEEEEEECGGGGGGTTSSC
T ss_pred cccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEecccccc-cCCCCeEEeCCCcEEeeCccchhhChhhHhhccCCC
Confidence 3689999999998653 24899999999999999754322 12366899999999999999999999532 111
Q ss_pred --------------------CccchH----HHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeec
Q 015110 114 --------------------EWEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG 169 (413)
Q Consensus 114 --------------------~~e~~~----~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (413)
+.++.+ .....++++||||++++.. ..+.+.........+..+......
T Consensus 84 ~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-------~~~~~~~~~~~~g~r~~~~~~~~~ 156 (447)
T 4f0r_A 84 DKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMYF-------YNAAVARAGLASGMRTFVGCSILE 156 (447)
T ss_dssp SSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECBS-------CHHHHHHHHHHHTCEEEEEEEECS
T ss_pred CCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc-------CHHHHHHHHHHcCCeEEEEchhcC
Confidence 111122 2445678999999999852 122222222222212222222211
Q ss_pred ee---cCCchhhHHHHHHHHHc--CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh-hhchhhHhh
Q 015110 170 GL---VPENAYNASALEALLNA--GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME-KGSERHVKL 243 (413)
Q Consensus 170 ~~---~~~~~~~~~~l~~l~~~--G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~-~~~~~~~~~ 243 (413)
.. .....+.++.+.++++. |...+++.+++.. ...++.++++++++.|+++|+++++|+.+. +.+...+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~~ 233 (447)
T 4f0r_A 157 FPTNYASNADDYIAKGMAERSQFLGEDLLTFTLAPHA---PYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKE 233 (447)
T ss_dssp SCCSSCSSHHHHHHHHHHHHHTTTTCTTEEEEEEECC---GGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHH
T ss_pred CCcccccCHHHHHHHHHHHHHHhcCCCceEEEEecCC---CCCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH
Confidence 00 01112334555555553 5555666655432 235689999999999999999999998543 333222211
Q ss_pred ccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccc
Q 015110 244 EDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHY 323 (413)
Q Consensus 244 ~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~ 323 (413)
.+ . .. ++..++.++ .+.+..+.|+... . -+.++.+++.|+ .+.+||..
T Consensus 234 ~g-------------~-------~~----i~~~~~~g~----~~~~~~~~H~~~~-~-~~~~~~~~~~g~--~~~~~p~~ 281 (447)
T 4f0r_A 234 HG-------------Q-------RP----LARLQRLGL----LSPRLVAAHMVHL-N-DAEVELAARHGL--STAHNPAS 281 (447)
T ss_dssp HS-------------S-------CH----HHHHHHHTC----CSTTEEEEECCSC-C-HHHHHHHHHHTC--EEEECHHH
T ss_pred cC-------------C-------CH----HHHHHHcCC----CCCCcEEEeccCC-C-HHHHHHHHHcCC--EEEECchh
Confidence 11 0 01 122222221 2456677777643 1 123445555554 44578852
Q ss_pred cccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCccEEcCCCCCC
Q 015110 324 LAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT 372 (413)
Q Consensus 324 l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p~ 372 (413)
.+.. ..+ .+| +++.+..|...+++||+.+.
T Consensus 282 ~~~~-----~~~-----~~~---------~~~~~~~Gv~v~lgTD~~~~ 311 (447)
T 4f0r_A 282 NMKL-----ASG-----ISP---------VSKLMDAGVAVGIGTDGAAS 311 (447)
T ss_dssp HHHT-----TCC-----CCC---------HHHHHHTTCEEEECCCCGGG
T ss_pred hhhc-----CCC-----CCc---------HHHHHHCCCcEEEeCCCCcC
Confidence 2110 001 122 55667789999999999654
No 42
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=99.87 E-value=3.1e-21 Score=192.30 Aligned_cols=269 Identities=16% Similarity=0.151 Sum_probs=153.0
Q ss_pred CcceEEEccEEEcCCC----ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCC-----
Q 015110 42 YNQYWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR----- 112 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~----~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~----- 112 (413)
+++++|+|++|+++++ ..+++|+|+||||++|++..+.. ..++.++||++|++|+|||||+|+|+.+..+
T Consensus 7 ~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~-~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~ 85 (451)
T 4dyk_A 7 PFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAM-RHGATEIRELPGMLLAPGLVNAHGHSAMSLFRGLAD 85 (451)
T ss_dssp CEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHHT-TTCEEEEEEEEEEEEEECEEECCCCGGGGGGTTSSC
T ss_pred hhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCccccc-cCCCCeEEeCCCCEEeecccchhhChhhHHhccCCC
Confidence 4689999999998653 24799999999999999754321 1246789999999999999999999943311
Q ss_pred -------------------CCccchHH----HHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeec
Q 015110 113 -------------------TEWEGFPS----GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG 169 (413)
Q Consensus 113 -------------------~~~e~~~~----~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (413)
.+.++++. ....++++||||++|+.. . .+.+....+...-+..+......
T Consensus 86 ~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~--~-----~~~~~~a~~~~g~r~~~~~~~~~ 158 (451)
T 4dyk_A 86 DLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMYF--Y-----PQAICGVVHDSGVRAQVAIPVLD 158 (451)
T ss_dssp SSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECS--C-----HHHHHHHHHHHTCEEEEEEEECS
T ss_pred CCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc--C-----HHHHHHHHHHcCCeEEEEchhhC
Confidence 11122222 345567999999999852 1 22232222222212222222211
Q ss_pred ee---cCCchhhHHHHHHHHH--cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChhhchhhHhh
Q 015110 170 GL---VPENAYNASALEALLN--AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKGSERHVKL 243 (413)
Q Consensus 170 ~~---~~~~~~~~~~l~~l~~--~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e~~~~~~~~~~~ 243 (413)
.- .....+.+++..++++ .+...++..++++. .+.++++.++++++.|+++|+++++|+ ++.+.+...+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~ 235 (451)
T 4dyk_A 159 FPIPGARDSAEAIRQGMALFDDLKHHPRIRIAFGPHA---PYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAMER 235 (451)
T ss_dssp SCBTTBSSHHHHHHHHHHHHHHTTTCSSEEEEEEECC---GGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHH
T ss_pred CCCccccCHHHHHHHHHHHHHHhcCCCceEEEEecCC---CCccCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH
Confidence 00 0111223444444443 24344555544432 235689999999999999999999997 443333222211
Q ss_pred ccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccc
Q 015110 244 EDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHY 323 (413)
Q Consensus 244 ~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~ 323 (413)
.+ . .. ++...+.+ ..+.+..+.|+... . -+.++.+++.|+ .+.+||..
T Consensus 236 ~g-------------~-------~~----i~~~~~~g----~~~~~~~~~H~~~~-~-~~~~~~l~~~g~--~v~~~p~s 283 (451)
T 4dyk_A 236 NG-------------E-------RP----LARLHRLG----LLGPRFQAVHMTQV-D-NDDLAMLVETNS--SVIHCPES 283 (451)
T ss_dssp HS-------------S-------CH----HHHHHHTT----CCSTTEEEEECCCC-C-HHHHHHHHHHTC--EEEECHHH
T ss_pred hC-------------C-------CH----HHHHHHCC----CCCCCeEEEECCCC-C-HHHHHHHHHcCC--EEEEChhh
Confidence 11 0 01 12222222 12456667776643 1 123444555554 55578852
Q ss_pred cccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCccEEcCCCCCC
Q 015110 324 LAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT 372 (413)
Q Consensus 324 l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p~ 372 (413)
-... ..+ .+| +.+.++.|...++|||+.+.
T Consensus 284 ~~~~-----~~~-----~~~---------~~~~~~~Gv~v~lgtD~~~~ 313 (451)
T 4dyk_A 284 NLKL-----ASG-----FCP---------VEKLWQAGVNVAIGTDGAAS 313 (451)
T ss_dssp HHHT-----TCC-----CCC---------HHHHHHHTCCEEECCCCGGG
T ss_pred hhhc-----cCC-----ccc---------HHHHHhCCCeEEEECCCCcc
Confidence 2110 001 222 34456679999999999653
No 43
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=99.86 E-value=3.3e-21 Score=190.27 Aligned_cols=251 Identities=20% Similarity=0.210 Sum_probs=151.5
Q ss_pred cceEEEccEEEcCCC---ceeeEEEEE-CCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCCccch
Q 015110 43 NQYWLTSKRIVTPKG---VISGAVEIK-EGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGF 118 (413)
Q Consensus 43 ~~lli~n~~vi~~~~---~~~~~V~I~-dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~ 118 (413)
++++|+|++|+++++ ..+++|+|+ ||||++|++....+ ++.++||++|++|+|||||+|+|+..++...+++
T Consensus 15 ~~~li~n~~vv~~~~~~~~~~~~v~I~~~g~I~~Ig~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~- 90 (417)
T 2ogj_A 15 APILLTNVKPVGFGKGASQSSTDILIGGDGKIAAVGSALQAP---ADTQRIDAKGAFISPGWVDLHVHIWHGGTDISIR- 90 (417)
T ss_dssp CCEEEEEEEECSSCTTCCCSCEEEEECTTSBEEEEETTCCCS---SCEEECCC--CEEEECEEEEEECCCBTTBSSCCC-
T ss_pred CcEEEECCEEEcCCCCccCccceEEEecCCEEEEeccCCCCC---CCCeEEECCCCEEccCeeeccccccccccccCCC-
Confidence 479999999999875 357899999 99999998753221 2457999999999999999999998765433322
Q ss_pred HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH-HHHHHhc--CCeeeEEeeceecC-----Cc----hhhHHHHHHHH
Q 015110 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL-KVDAAEK--RIYVDVGFWGGLVP-----EN----AYNASALEALL 186 (413)
Q Consensus 119 ~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~-----~~----~~~~~~l~~l~ 186 (413)
..+.++++||||++|++ +..+ .+.+.+.. ..+.... ..++++... +... .. ....+.+++++
T Consensus 91 --~~~~~l~~GvTtv~d~~-~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~-G~~~~~~~~e~~~~~~~~~~~~~~~~ 164 (417)
T 2ogj_A 91 --PSECGAERGVTTLVDAG-SAGE--ANFHGFREYIIEPSRERIKAFLNLGSI-GLVACNRVPELRDIKDIDLDRILECY 164 (417)
T ss_dssp --GGGTSGGGTEEEEEEES-SCCS--TTHHHHHHHTTTTCSSEEEEEEESSTT-TTTTTTTSCSCSSGGGCCHHHHHHHH
T ss_pred --HHHHHHhCCcCeEEeCC-cCCC--cCHHHHHHHHhhccccCeEEEeccccC-cCCCCCCcccccchhhcCHHHHHHHH
Confidence 23467999999999987 4322 22333322 1111110 011111111 1111 00 01235566666
Q ss_pred Hc---CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchH
Q 015110 187 NA---GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPS 263 (413)
Q Consensus 187 ~~---G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 263 (413)
+. ++.++|.++.+.. ...++.+.++++++.|+++|+++.+|+++....
T Consensus 165 ~~~~~~~~~ik~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~-------------------------- 215 (417)
T 2ogj_A 165 AENSEHIVGLKVRASHVI---TGSWGVTPVKLGKKIAKILKVPMMVHVGEPPAL-------------------------- 215 (417)
T ss_dssp HTCTTTEEEEEEEESHHH---HTTCTTHHHHHHHHHHHHHTCCEEEEECSSSSC--------------------------
T ss_pred HhCCCceEEEEEEecCCc---cccccHHHHHHHHHHHHHcCCcEEEEcCCCccc--------------------------
Confidence 53 4567888765321 123567788999999999999999999643210
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCceEEEEccC----------ChhhHHHHHHHHHHCCCCEEEEccccccccccccCCC
Q 015110 264 WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS----------DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD 333 (413)
Q Consensus 264 ~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s----------~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~ 333 (413)
+..+..+.+ .| ..+.|+. +. ...+.++.++++|+ .++++|+..
T Consensus 216 -----~~~~~~~l~--------~g--~~~~H~~~~~~~~~~~~~~-~~~~~i~~~~~~g~--~v~~~~~~~--------- 268 (417)
T 2ogj_A 216 -----YDEVLEILG--------PG--DVVTHCFNGKSGSSIMEDE-DLFNLAERCAGEGI--RLDIGHGGA--------- 268 (417)
T ss_dssp -----HHHHHHHCC--------TT--CEEETTTCCCTTTCTTSCH-HHHHHHHHC--CCC--EEECCBCSS---------
T ss_pred -----HHHHHHHhc--------CC--CEEEeccCCCccchhccCH-HHHHHHHHHHhcCc--EEEecCCCc---------
Confidence 111111111 02 2455533 33 45567777777775 445565311
Q ss_pred CCcceEEcCCCCChhcHHHHHHHHhcC-CccEEcCCCCCCC
Q 015110 334 GDTRFKCAPPIRDAANKEKLWEALMDG-HIDMLSSDHSPTV 373 (413)
Q Consensus 334 ~~~~~k~~Pplr~~~~~~~L~~~l~~G-~i~~i~sDh~p~~ 373 (413)
. ..+..++++++.| ..++++|||. ++
T Consensus 269 ---~----------~~~~~~~~~~~~G~~~~~lgtD~~-~~ 295 (417)
T 2ogj_A 269 ---S----------FSFKVAEAAIARGLLPFSISTDLH-GH 295 (417)
T ss_dssp ---S----------CCHHHHHHHHHTTCCCSBCCBCBS-TT
T ss_pred ---c----------ccchHHHHHHHcCCCceEEEcCCC-CC
Confidence 1 1356789999999 9999999997 53
No 44
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=99.86 E-value=3.5e-21 Score=193.17 Aligned_cols=268 Identities=14% Similarity=0.112 Sum_probs=152.4
Q ss_pred cceEEEccEEEcCCC----ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCC-----
Q 015110 43 NQYWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT----- 113 (413)
Q Consensus 43 ~~lli~n~~vi~~~~----~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~----- 113 (413)
++++|+|++|+++++ ..+++|+|+||||++|++..+.+...++.++||++|++|+|||||+|+|+......
T Consensus 14 ~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~~~ 93 (472)
T 4dzh_A 14 CDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRFAPARTVSRPDAALMPGLVNAHTHNPMTLLRGVADD 93 (472)
T ss_dssp EEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHHEEEEEEEEEEEEEEEECEEEEEECGGGGGGTTSSCS
T ss_pred CcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhcCCCCeEEeCCCcEEEECccccccChhhHHhccccCC
Confidence 578999999998753 24899999999999999754321001256899999999999999999999753211
Q ss_pred -------------------CccchH----HHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeece
Q 015110 114 -------------------EWEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG 170 (413)
Q Consensus 114 -------------------~~e~~~----~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (413)
+.++++ .....++++||||++|++. ..+.+.........+..+.+.....
T Consensus 94 ~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-------~~~~~~~a~~~~g~r~~~~~~~~~~ 166 (472)
T 4dzh_A 94 LPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENYF-------FADVQAAVYKQHGFRALVGAVIIDF 166 (472)
T ss_dssp CCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECS-------CHHHHHHHHHHTTCEEEEEEEECSS
T ss_pred CCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc-------CHHHHHHHHHHhCCeEEEEecccCC
Confidence 011111 2345589999999999862 1222222222211122222222110
Q ss_pred ---ecCCchhhHHHHHHHHHc--CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChhhchhhHhhc
Q 015110 171 ---LVPENAYNASALEALLNA--GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKGSERHVKLE 244 (413)
Q Consensus 171 ---~~~~~~~~~~~l~~l~~~--G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e~~~~~~~~~~~~ 244 (413)
......+.++.+.++.+. +...++..+++.. .+.++.++++++++.|+++|+++++|+ ++...+...+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~~ 243 (472)
T 4dzh_A 167 PTAWASSDDEYFARAGELHDQWRDDPLISTAFAPHA---PYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVAQY 243 (472)
T ss_dssp CCSSCSSHHHHHHHHHHHHHHHTTCSSEEEEEEECC---TTTSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHH
T ss_pred CcccccCHHHHHHHHHHHHHHhCCCCceEEEEecCC---CCCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 001112334444444432 3334555554432 235689999999999999999999997 4443332222211
Q ss_pred cCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEcccccc
Q 015110 245 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYL 324 (413)
Q Consensus 245 ~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l 324 (413)
+ .+ .+..+.++. ..+.+..+.|+... . -+.++.+++.|+ .+.+||...
T Consensus 244 g-------------~~-------~i~~~~~~g--------~~~~~~~~~H~~~l-~-~~~i~~l~~~g~--~v~~~p~s~ 291 (472)
T 4dzh_A 244 G-------------QR-------PLARLDRLG--------LVNDRLIAVHMTQL-T-EAEIHLCAERGV--SVVHCPESN 291 (472)
T ss_dssp S-------------SC-------HHHHHHHHT--------CCSTTEEEEECCSC-C-HHHHHHHHHHTC--EEEECHHHH
T ss_pred C-------------CC-------HHHHHHHcC--------CCCCCeEEEeccCC-C-HHHHHHHHHcCC--EEEEChHHH
Confidence 1 00 122222222 12456677777643 1 123444555555 445788522
Q ss_pred ccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCccEEcCCCCC
Q 015110 325 AFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP 371 (413)
Q Consensus 325 ~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p 371 (413)
..- ..+ .+| +.+.++.|+..++|||+.+
T Consensus 292 ~~~-----~~~-----~~~---------~~~~~~~Gv~v~lgtD~~~ 319 (472)
T 4dzh_A 292 LKL-----ASG-----FCP---------ACALQRASVNLAIGTDGCA 319 (472)
T ss_dssp HHT-----TCC-----CCC---------HHHHHHTTCEEEECCCCTT
T ss_pred Hhc-----CCC-----Ccc---------HHHHHHCCCCEEEECCCCc
Confidence 110 001 122 4555677999999999864
No 45
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=99.86 E-value=4.4e-20 Score=184.06 Aligned_cols=182 Identities=16% Similarity=0.168 Sum_probs=109.8
Q ss_pred eEEEcc-EEEcCCC----ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCC------
Q 015110 45 YWLTSK-RIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT------ 113 (413)
Q Consensus 45 lli~n~-~vi~~~~----~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~------ 113 (413)
++|+|+ .|+++++ ..+++|+|+||||++|++.... .++.++||++|++|+|||||+|+|+.+....
T Consensus 2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~~---~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~~~ 78 (456)
T 3ls9_A 2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLSD---RSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLE 78 (456)
T ss_dssp EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCCC---TTCSEEEECTTEEEEECEEEEEECGGGGGGBTCGGGS
T ss_pred EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCCC---CCCCeEEeCCCCEEecCeeecccccchhhhcccccCC
Confidence 789999 6777664 2589999999999999987432 2467899999999999999999999643211
Q ss_pred ------------------------CccchH----HHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHh---cCCe
Q 015110 114 ------------------------EWEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE---KRIY 162 (413)
Q Consensus 114 ------------------------~~e~~~----~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 162 (413)
+.++++ .....++++||||+.++. ...+.......++...+... .+..
T Consensus 79 ~~~l~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~a~~~~g~r~~ 157 (456)
T 3ls9_A 79 RVTMASWLEGVLTRSAGWWRDGKFGPDVIREVARAVLLESLLGGITTVADQH-LFFPGATADSYIDATIEAATDLGIRFH 157 (456)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEE-CCCCSSSCCTHHHHHHHHHHHHTCEEE
T ss_pred CCCHHHHHHHhccccccccccccCCHHHHHHHHHHHHHHHHhCCeeEEEecc-ccccCcccchhHHHHHHHHHHcCCEEE
Confidence 001111 234557999999999995 23333211122222222222 1111
Q ss_pred eeEEeece------ecC-----CchhhHHHHHHHHHc--C---CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 015110 163 VDVGFWGG------LVP-----ENAYNASALEALLNA--G---VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP 226 (413)
Q Consensus 163 ~~~~~~~~------~~~-----~~~~~~~~l~~l~~~--G---~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~ 226 (413)
+....... ..+ ...+.+++..++++. + ...++..+.+.. .+.++++.++++++.|+++|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~ 234 (456)
T 3ls9_A 158 AARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCG---VPYDKPELFEAFAQMAADYDVR 234 (456)
T ss_dssp EEECCCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECCCC---TTTSCHHHHHHHHHHHHHHTCE
T ss_pred EEccccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEecCC---CCCCCHHHHHHHHHHHHHCCCC
Confidence 11111100 000 111233444454431 2 222344444432 2457899999999999999999
Q ss_pred EEEecCC
Q 015110 227 LLVHAEM 233 (413)
Q Consensus 227 v~~H~e~ 233 (413)
+++|+.+
T Consensus 235 v~~H~~e 241 (456)
T 3ls9_A 235 LHTHFYE 241 (456)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 9999843
No 46
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=99.86 E-value=3.1e-21 Score=193.73 Aligned_cols=271 Identities=15% Similarity=0.070 Sum_probs=155.6
Q ss_pred ceEEEccEEEcCCC---------------ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccC
Q 015110 44 QYWLTSKRIVTPKG---------------VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD 108 (413)
Q Consensus 44 ~lli~n~~vi~~~~---------------~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~ 108 (413)
.++|.+|+|+++.+ ..+++|+|+||||++|++..+.+...++.++||++|++|+|||||+|+|+.
T Consensus 4 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~V~I~~G~I~~Vg~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~Hl~ 83 (475)
T 2ood_A 4 TTVGIRGTFFDFVDDPWKHIGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAHPGVEITHIKDRIIVPGFIDGHIHLP 83 (475)
T ss_dssp CEEEEEEEEEEESSCGGGSTTCGGGGEEEEEEEEEEEESSBEEEEEEHHHHHHHSTTCEEEEEEEEEEEECEEEEEEEGG
T ss_pred cceEEEEEEEecCCccccccccCCCcceEEECCEEEEECCEEEEEeChhhhccccCCCeEEeCCCcEEecceecCcccHH
Confidence 45788999998654 247899999999999987532110012568999999999999999999985
Q ss_pred CCC------CC-----------------Cccch----HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcC-
Q 015110 109 DPG------RT-----------------EWEGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR- 160 (413)
Q Consensus 109 ~~~------~~-----------------~~e~~----~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~- 160 (413)
+.. .. +.+++ ...++.++++||||+++++ +.. .+.++...+.....
T Consensus 84 ~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~-~~~-----~~~~~~~~~~~~~~g 157 (475)
T 2ood_A 84 QTRVLGAYGEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFT-SSS-----PVATEELFEEASRRN 157 (475)
T ss_dssp GTTCTTCCSCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEEEC-CSS-----HHHHHHHHHHHHHHT
T ss_pred hHhhcCCCCCCHHHHHHHhccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEec-ccC-----chhHHHHHHHHHHcC
Confidence 321 10 11222 2346788999999999976 321 23333333332211
Q ss_pred CeeeEEeec-ee-cC-----CchhhHHHHHHHHHc--CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc-CCCEEEe
Q 015110 161 IYVDVGFWG-GL-VP-----ENAYNASALEALLNA--GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRPLLVH 230 (413)
Q Consensus 161 ~~~~~~~~~-~~-~~-----~~~~~~~~l~~l~~~--G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H 230 (413)
..+.++... .. .+ ...+.++++.++++. +...++..+.+.. .+.++++.++++++.|+++ |+++++|
T Consensus 158 ~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~e~l~~~~~~a~~~~g~~v~~H 234 (475)
T 2ood_A 158 MRVIAGLTGIDRNAPAEFIDTPENFYRDSKRLIAQYHDKGRNLYAITPRF---AFGASPELLKACQRLKHEHPDCWVNTH 234 (475)
T ss_dssp CCEEECCEECCSSSCTTTCCCHHHHHHHHHHHHHHHTTBTTEEEEEEECB---GGGCCHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CeEEEEeeecccCCCcccccCHHHHHHHHHHHHHHhccCCceEEEEeccc---cCcCCHHHHHHHHHHHHhCCCCcEEEe
Confidence 111111100 00 01 111233445555441 3333555444432 2457889999999999999 9999999
Q ss_pred cC-ChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHH
Q 015110 231 AE-MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAK 309 (413)
Q Consensus 231 ~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak 309 (413)
+. +...+.......+ .. ...+.+.++.+ ..+.+..+.|+... . -+.++.++
T Consensus 235 ~~e~~~~~~~~~~~~g------------~~----------~~~~~~~~~~g----~~~~~~~i~H~~~~-~-~~~i~~~~ 286 (475)
T 2ood_A 235 ISENPAECSGVLVEHP------------DC----------QDYLGVYEKFD----LVGPKFSGGHGVYL-S-NNEFRRMS 286 (475)
T ss_dssp CSCCHHHHHHHHHHCT------------TC----------SSHHHHHHTTT----CCSTTEEEECCTTC-C-HHHHHHHH
T ss_pred eCCChHHHHHHHHHcC------------CC----------ccHHHHHHHcC----CCCCCcEEEEeecC-C-HHHHHHHH
Confidence 85 4433322111100 00 01122333322 13566667777643 1 13455555
Q ss_pred HCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCc--cEEcCCCCCC
Q 015110 310 TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHI--DMLSSDHSPT 372 (413)
Q Consensus 310 ~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i--~~i~sDh~p~ 372 (413)
+.| +.+.+||++-.. + + ...|| +++.++.|++ +++||||.|+
T Consensus 287 ~~g--~~~~~~P~~~~~----l---~---~~~~~---------~~~~~~~Gv~~~~~lgTD~~~~ 330 (475)
T 2ood_A 287 KKG--AAVVFCPCSNLF----L---G---SGLFR---------LGRATDPEHRVKMSFGTDVGGG 330 (475)
T ss_dssp HHT--CEEEECHHHHHH----T---T---CCCCC---------HHHHTCTTSCCEEEECCCBTTB
T ss_pred HcC--CEEEEChhhhhh----c---c---cCcCC---------HHHHHhCCCCCcEEEEccCCCC
Confidence 566 456689974211 1 1 11344 4577888999 9999999874
No 47
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=99.85 E-value=4.9e-21 Score=188.24 Aligned_cols=170 Identities=19% Similarity=0.180 Sum_probs=104.4
Q ss_pred eEEEccEEEcCCC--ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCC---------
Q 015110 45 YWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT--------- 113 (413)
Q Consensus 45 lli~n~~vi~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~--------- 113 (413)
++|+|++|+++++ ..+++|+|+||||++|++.. ++.+ ||++|++|+|||||+|+|+......
T Consensus 1 ~li~n~~v~~~~~~~~~~~~v~I~~g~I~~vg~~~------~~~~-iD~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~ 73 (406)
T 1p1m_A 1 MIIGNCLILKDFSSEPFWGAVEIENGTIKRVLQGE------VKVD-LDLSGKLVMPALFNTHTHAPMTLLRGVAEDLSFE 73 (406)
T ss_dssp CEEEEEEECCSTTSCCEEEEEEEETTEEEEEEESS------CCCS-EECTTEEEEECEEEEEECGGGGGGTTSSCSCCHH
T ss_pred CEEEccEEEecCccccccceEEEECCEEEEeeCCC------Ccce-ecCCCcEEeecccchhhccchhhhccccCCCCHH
Confidence 4799999998764 46789999999999999753 1456 9999999999999999999754210
Q ss_pred --------------CccchHHH----HHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCc
Q 015110 114 --------------EWEGFPSG----TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN 175 (413)
Q Consensus 114 --------------~~e~~~~~----~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (413)
+.+++... .+.++++||||+++++. . .+.+....+....+.....++ .......
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~-~------~~~~~~~~~~~g~r~~~~~~~-~~~~~~~ 145 (406)
T 1p1m_A 74 EWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMYF-H------EEWIAKAVRDFGMRALLTRGL-VDSNGDD 145 (406)
T ss_dssp HHHHTTHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEES-S------HHHHHHHHHHHCCEEEEEEEE-CCBTTBC
T ss_pred HHHHhhhccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEechh-C------HHHHHHHHHHcCCEEEEEccc-ccCCCCH
Confidence 12223222 35678999999999862 1 122222122111111111111 1111111
Q ss_pred hhhHHHHHHHHH--cCC-cEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC
Q 015110 176 AYNASALEALLN--AGV-LGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE 232 (413)
Q Consensus 176 ~~~~~~l~~l~~--~G~-~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e 232 (413)
.+.+++..++++ .+. ..++..+.+.. ...++.++++++++.|+++|+++++|+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~ 202 (406)
T 1p1m_A 146 GGRLEENLKLYNEWNGFEGRIFVGFGPHS---PYLCSEEYLKRVFDTAKSLNAPVTIHLY 202 (406)
T ss_dssp TTHHHHHHHHHHHHTTGGGTEEEEEEECC---TTTSCHHHHHHHHHHHHHTTCCEEEEES
T ss_pred HHHHHHHHHHHHHhhCCCCcEEEEEecCc---cCcCCHHHHHHHHHHHHHCCCcEEEEcC
Confidence 222333333332 122 23555544432 1246889999999999999999999984
No 48
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=99.84 E-value=1.7e-19 Score=177.89 Aligned_cols=184 Identities=18% Similarity=0.156 Sum_probs=108.5
Q ss_pred cceEEEccEEEcCCC------c-eeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCC--
Q 015110 43 NQYWLTSKRIVTPKG------V-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-- 113 (413)
Q Consensus 43 ~~lli~n~~vi~~~~------~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~-- 113 (413)
++++|+|++++++++ . .+++|+|+||||++||+..+.+.. .+.++||++|++|+|||||+|+|+...+..
T Consensus 5 ~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~-~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~ 83 (416)
T 2q09_A 5 CERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKGP-YPAHWQDMKGKLVTPGLIDCHTHLIFAGSRAE 83 (416)
T ss_dssp CSEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC---CCTTSEECTTCEEEECEEEEEECCCCCSCCHH
T ss_pred ccEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhcccc-CCCeEEeCCCCEECCcccccccCcchhhhhHH
Confidence 578999999998765 1 478999999999999976432210 145799999999999999999999765431
Q ss_pred -------------------------------CccchH----HHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHh
Q 015110 114 -------------------------------EWEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE 158 (413)
Q Consensus 114 -------------------------------~~e~~~----~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
+.+++. ...+.++++||||+.++.....+.......++...+...
T Consensus 84 ~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (416)
T 2q09_A 84 EFELRQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRVARRLGE 163 (416)
T ss_dssp HHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECCSCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHhhhcCCcEeehhhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEeccCcccChHhHHHHHHHHHHHHh
Confidence 112222 224778999999999975111111011122333322222
Q ss_pred c-CCeeeEEeece--ecCC----chhhHHH-----HHHHHHcC-CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCC
Q 015110 159 K-RIYVDVGFWGG--LVPE----NAYNASA-----LEALLNAG-VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKR 225 (413)
Q Consensus 159 ~-~~~~~~~~~~~--~~~~----~~~~~~~-----l~~l~~~G-~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~ 225 (413)
. ...+...+.+. +... ..+.++. +++....+ +..++.+.. .+.++.+++.++++.|+++|+
T Consensus 164 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~g~ 237 (416)
T 2q09_A 164 ALPIRVKTTLLAAHAVPPEYRDDPDSWVETICQEIIPAAAEAGLADAVDVFCE------HIGFSLAQTEQVYLAADQYGL 237 (416)
T ss_dssp HSSSEEEEEEEEETSCCGGGTTCHHHHHHHHHHTHHHHHHHTTCCSEEEEBBS------TTSBCHHHHHHHHHHHHHTTC
T ss_pred hCCceEEEeeeccccCCccccCCHHHHHHHHHhhhhHHHHhcccccccccccC------CCcCCHHHHHHHHHHHHHCCC
Confidence 1 11111111110 1100 0111111 12222333 344443321 135688999999999999999
Q ss_pred CEEEecCC
Q 015110 226 PLLVHAEM 233 (413)
Q Consensus 226 ~v~~H~e~ 233 (413)
++.+|+..
T Consensus 238 ~v~~H~~~ 245 (416)
T 2q09_A 238 AVKGHMDQ 245 (416)
T ss_dssp EEEEEESS
T ss_pred cEEEEECC
Confidence 99999854
No 49
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=99.83 E-value=7.2e-23 Score=210.03 Aligned_cols=296 Identities=17% Similarity=0.112 Sum_probs=164.5
Q ss_pred ccccCCCCcceEEEccEEEcCCCceeeEEEEECCEEEEcccCCCCC-------CCCCCCcEEecCCCEEeeeeeeccccc
Q 015110 35 SECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP-------RNSKTGQVVDYGEAVIMPGLIDVHAHL 107 (413)
Q Consensus 35 ~~~~~~~~~~lli~n~~vi~~~~~~~~~V~I~dG~I~~Ig~~~~~~-------~~~~~~~vID~~G~~vlPGlID~H~H~ 107 (413)
++.+.....|++|+|++|+|++++.++||+|+||||++||+...+. ..+++.++||++|++|+|||||+|+|+
T Consensus 57 ~~~~~~~~~DlvI~Na~Ivd~~Gi~kaDIlIkDGrIaaIG~ag~pd~~d~vdl~~~~g~eVIDA~GkiV~PG~ID~HvH~ 136 (566)
T 4ep8_C 57 GQMLAADCVDLVLTNALIVDHWGIVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAGGIDTHIHW 136 (566)
T ss_dssp CCCCGGGSCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEEEECEEEEEEEC
T ss_pred CCCCCCCCCCEEEECcEEECCCCeEEeEEEEECCEEEEeecCCCcccccccccccCCCCEEEECCCCEEEcCEEEecccc
Confidence 3333444579999999999999888999999999999999632110 012478999999999999999999999
Q ss_pred CCCCCCCccchHHHHHHHHhCCceEEEeCCCCC------CCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHH
Q 015110 108 DDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNS------DPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASA 181 (413)
Q Consensus 108 ~~~~~~~~e~~~~~~~~al~~GvTTv~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (413)
..++.. ..+...+.++........ ............ .........++++++....... ...
T Consensus 137 ~~~~~~---------~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~-~~~a~~~~~~~~~~~~~~~~~~---~~~ 203 (566)
T 4ep8_C 137 ICPQQA---------EEALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISR-MLQAADSLPVNIGLLGKGNVSQ---PDA 203 (566)
T ss_dssp SCTTHH---------HHHHHHTEEEEEEECSSSSHHHHHCCCCCHHHHHHH-HHHHHTTSSSEEEEEEECCCSC---HHH
T ss_pred cCCCcc---------chhhhhhHHHHhhCceEEEEecCCCCCchHHHHHHH-HHHhccccceeeeeeccccccc---chh
Confidence 876421 222333444443321000 001111222222 2233344567777766544333 345
Q ss_pred HHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhch---hhHhhccCcCCccccccCCC
Q 015110 182 LEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE---RHVKLEDDTLDTRSYSTYLK 258 (413)
Q Consensus 182 l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~---~~~~~~~~~~~~~~~~~~~~ 258 (413)
...+...++.+++.+..+ ......+......+..++....+|.+...... ....... ......+..
T Consensus 204 ~~~~~~a~~~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~e~~~~~~~----~~~~~~~~~ 272 (566)
T 4ep8_C 204 LREQVAAGVIGLKIHEDW-------GATPAAIDCALTVADEMDIQVALHSDTLNESGFVEDTLAAIG----GRTIHTFHT 272 (566)
T ss_dssp HHHHHHHTCSEEEEEGGG-------CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHT----TCCEEETTT
T ss_pred hHHHhhhccccccccccc-------cccchhhhhHhHHHHHhcchhhhhhhhHHHHHHHHhhHhhcc----Ccccccccc
Confidence 556667788888876543 23556777888888889999999986655421 1111111 011111122
Q ss_pred CCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcce
Q 015110 259 TRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRF 338 (413)
Q Consensus 259 ~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~ 338 (413)
..+...+...+.+....+... ..+.+..|.++. ..++.... ..++.||+.++.... ....
T Consensus 273 ~~~~~~~~~~~~~~~~~a~~~-------~~~~~~~~~~~~-~~~~e~~~---------~~~~~h~l~~~~~~~---~~~~ 332 (566)
T 4ep8_C 273 EGAGGGHAPDIITACAHPNIL-------PSSTNPTLPYTL-NTIDEHLD---------MLMVCHHLDPDIAED---VAFA 332 (566)
T ss_dssp TSTTSSSTTTGGGGGGCTTEE-------EEECSTTSSCBT-THHHHHHH---------HHHHHHTCCTTCHHH---HHHH
T ss_pred ccchhHHHHHHHHHHHHHhhc-------CCceeehhHHHH-HHhhcccc---------eEEEeecccCChhhH---Hhhc
Confidence 222222222222222222211 223334444444 33332221 124667776654321 1112
Q ss_pred EEcCCCCChhcHHHHHHHHhcCCccEEcCCCCCCChhhh
Q 015110 339 KCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK 377 (413)
Q Consensus 339 k~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p~~~~~k 377 (413)
+..++ .......+..+..|.++.++|||+|+....+
T Consensus 333 ~~~~~---~~~~~~~~~l~~~G~~~~i~sD~~~~~~~~~ 368 (566)
T 4ep8_C 333 ESRIR---RETIAAEDVLHDLGAFSLTSSDSQAMGRVGE 368 (566)
T ss_dssp HHHCC---HHHHHHHHHHHHHTSSCEECCCTTSSSCTTC
T ss_pred cCCCc---ccchHHHHHHHhCCCcceEeecccccccccc
Confidence 22222 2334445555667999999999999875543
No 50
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=99.83 E-value=2.6e-20 Score=182.54 Aligned_cols=177 Identities=16% Similarity=0.156 Sum_probs=114.7
Q ss_pred cceEEEccEEEcCCCc-eeeEEEEECCEEEEcccCCCCCCCCCCCcEEecC-CCEEeeeeeecccccCCC---CCCCccc
Q 015110 43 NQYWLTSKRIVTPKGV-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYG-EAVIMPGLIDVHAHLDDP---GRTEWEG 117 (413)
Q Consensus 43 ~~lli~n~~vi~~~~~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~-G~~vlPGlID~H~H~~~~---~~~~~e~ 117 (413)
++++|+|++|+++++. .+++|+|+||||++|++..... ++.++||++ |++|+|||||+|+|+..+ ...++++
T Consensus 3 ~~~li~~~~v~~~~~~~~~~~v~I~~g~I~~ig~~~~~~---~~~~viD~~~g~~v~PGlID~H~H~~~~~~~~~~~~e~ 79 (396)
T 2vhl_A 3 ESLLIKDIAIVTENEVIKNGYVGINDGKISTVSTERPKE---PYSKEIQAPADSVLLPGMIDIHIHGGYGADTMDASFST 79 (396)
T ss_dssp CCEEEEEEEEECSSCEEEEEEEEEETTEEEEEESSCCSS---CCSEEEECCTTCEEEECEEEEEECEETTEEGGGCSHHH
T ss_pred ccEEEEeeEEEcCCccccCceEEEECCEEEEEECCCCCC---CCCceEcCCCCCEEcCCEEEEeecCCcCccccCCCHHH
Confidence 4789999999998875 4789999999999998321111 245899999 999999999999999865 2334566
Q ss_pred hHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhc-C----CeeeEEeec--eec-C-----Cc-----hhhH
Q 015110 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-R----IYVDVGFWG--GLV-P-----EN-----AYNA 179 (413)
Q Consensus 118 ~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~--~~~-~-----~~-----~~~~ 179 (413)
++..+++++++||||+++++ ++.+.......++...+.... . ....++++. ... + .. ....
T Consensus 80 ~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 158 (396)
T 2vhl_A 80 LDIMSSRLPEEGTTSFLATT-ITQEHGNISQALVNAREWKAAEESSLLGAELLGIHLEGPFVSPKRAGAQPKEWIRPSDV 158 (396)
T ss_dssp HHHHHHHGGGGTEEEEEEEC-CSCCHHHHHHHHHHHHHHHHHCSGGGSSSEEEEEEEECSSSCGGGCTTSCGGGCCCCCH
T ss_pred HHHHHHHHHcCCeeEEEecc-cCCCHHHHHHHHHHHHHHHhcccccccccceEEEeeecCccCccccCCCCHHHccCCCH
Confidence 77788999999999999997 443321112233333333322 2 111233321 110 0 00 1135
Q ss_pred HHHHHHHHcCCcEEEEee-cCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEE-ecC
Q 015110 180 SALEALLNAGVLGLKSFM-CPSGINDFPMTNASHIKEGLSVLARYKRPLLV-HAE 232 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~-~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~-H~e 232 (413)
+.++++.+.+...+|.+. .+. .+. +.++++.|+++|+++.+ |+.
T Consensus 159 ~~~~~~~~~~~~~ik~~~~~p~----~~~-----~~~~~~~a~~~g~~v~~gH~~ 204 (396)
T 2vhl_A 159 ELFKKWQQEAGGLIKIVTLAPE----EDQ-----HFELIRHLKDESIIASMGHTD 204 (396)
T ss_dssp HHHHHHHHHTTTCEEEEEECGG----GSG-----GGHHHHHHHHTTCEEEECSBC
T ss_pred HHHHHHHHhcCCcceEEEECCC----CCC-----HHHHHHHHHHCCCEEeecccC
Confidence 667777776666666442 221 111 23567889999999998 984
No 51
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=99.82 E-value=6.7e-19 Score=180.96 Aligned_cols=179 Identities=20% Similarity=0.248 Sum_probs=128.4
Q ss_pred CcceEEEccEEEcCCC--ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCCccchH
Q 015110 42 YNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFP 119 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~ 119 (413)
.++++|+|++|+|+.. ..+++|+|+||||++|++.... .++.++||++|++|+|||||+|+|+..+.. +..
T Consensus 34 ~~dlli~n~~ivd~~~~~~~~~dI~I~~G~I~~Vg~~~~~---~~~~~vID~~G~~v~PG~ID~H~Hl~~~~~----~~~ 106 (608)
T 3nqb_A 34 RFDVLITGGTLVDVVTGELRPADIGIVGALIASVHEPASR---RDAAQVIDAGGAYVSPGLIDTHMHIESSMI----TPA 106 (608)
T ss_dssp CEEEEEESCEEECTTTCCEEECEEEEETTEEEEEECTTSC---CCEEEEEECTTSEEEECEEEEEECGGGGTS----CHH
T ss_pred CCCEEEECeEEEECCCCeEEeeEEEEECCEEEEecCCCCC---CCCCeEEeCCCCEEecCeEecccCcccccC----CHH
Confidence 4689999999999864 4688999999999999975421 136689999999999999999999975432 345
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeec-eecCC--------chhhHHHHHHHHH-cC
Q 015110 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG-GLVPE--------NAYNASALEALLN-AG 189 (413)
Q Consensus 120 ~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~l~~l~~-~G 189 (413)
...+.++.+||||++++| ++.+.....+.++..++.... ...++.+.. +..+. .....++++++++ .+
T Consensus 107 ~~~~~al~~GvTtvv~~p-~~~~~v~g~~~~~~~l~~a~~-~~~~v~~~~p~~~P~~~~~~~~g~~~~~~el~~l~~~~~ 184 (608)
T 3nqb_A 107 AYAAAVVARGVTTIVWDP-HEFGNVHGVDGVRWAAKAIEN-LPLRAILLAPSCVPSAPGLERGGADFDAAILADLLSWPE 184 (608)
T ss_dssp HHHHHHHTTTEEEEEECC-HHHHHHHTHHHHHHHHHHHTT-CSSEEEEEECCCSSSSTTSCCCSCCCCHHHHHHHHTSTT
T ss_pred HHHHHHHhCCeEEEEcCC-ccccccCCHHHHHHHHHHhhh-cCcEEEEeccccCCCCCccccCcccCCHHHHHHHHhccC
Confidence 567889999999999987 443333345566655555543 233444433 22221 1123567888776 58
Q ss_pred CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 190 VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 190 ~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
+.+++.++.+.+ ...+++++.+.++.|+++|+++.+|++.
T Consensus 185 v~glgE~~~~~~----v~~~d~~l~~~l~~A~~~g~pV~~Ha~~ 224 (608)
T 3nqb_A 185 IGGIAEIMNMRG----VIERDPRMSGIVQAGLAAEKLVCGHARG 224 (608)
T ss_dssp EEEEEEECCHHH----HHTTCHHHHHHHHHHHHHTCEEEECCTT
T ss_pred cceeeEeeccCC----cCCCcHHHHHHHHHHHHcCCEEEEcCCC
Confidence 888887764421 1235678999999999999999999975
No 52
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=99.79 E-value=1.9e-17 Score=166.17 Aligned_cols=187 Identities=13% Similarity=0.113 Sum_probs=108.9
Q ss_pred CCcceEEEccEEEcCCC-----ceeeEEEEEC-CEEEEcccCCCC-----CCCCCCCcEEec-CCCEEeeeeeecccccC
Q 015110 41 PYNQYWLTSKRIVTPKG-----VISGAVEIKE-GNIISIVSEEDW-----PRNSKTGQVVDY-GEAVIMPGLIDVHAHLD 108 (413)
Q Consensus 41 ~~~~lli~n~~vi~~~~-----~~~~~V~I~d-G~I~~Ig~~~~~-----~~~~~~~~vID~-~G~~vlPGlID~H~H~~ 108 (413)
++.+++|+|..|.++.. ..+++|+|+| |||++|++..+. ....++.++||+ +|++|||||||+|+|+.
T Consensus 29 ~~~~~~~~g~~i~~~~~~~~~~~~~~~v~I~~~g~I~~vg~~~~~~~~~~~~~~~~~~viD~~~g~~v~PG~ID~H~H~~ 108 (476)
T 4aql_A 29 PPLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHAS 108 (476)
T ss_dssp --CCEEEEEEEEECCSSCSCEEEEEEEEEECTTSBEEEEEEGGGHHHHHHHTTCCGGGCEECCTTCEEEECEEEEEEEGG
T ss_pred CCccEEEEccEEecCCCCceeEecCcEEEEecCCeEEEecCcchhhhhhhhccCCCceEEEcCCCCEEeCCeeccccchH
Confidence 34678999998886633 2489999998 999999986321 011135689995 59999999999999985
Q ss_pred CCCCC----C-------------------ccc----hHH-HHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHh--
Q 015110 109 DPGRT----E-------------------WEG----FPS-GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE-- 158 (413)
Q Consensus 109 ~~~~~----~-------------------~e~----~~~-~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~-- 158 (413)
+..+. . .++ .+. ...+++++||||++++. .. ..+......+...
T Consensus 109 ~~~~rg~~~d~~l~~wL~~~~~p~e~~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~~~-~~-----~~~~~~~~~~a~~~~ 182 (476)
T 4aql_A 109 QYSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFA-TI-----HTDSSLLLADITDKF 182 (476)
T ss_dssp GGGGTTSCCCSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEEC-CS-----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHhhhhHHHhcCCHHHHHHHHHHHHHHHHHCCeeEEEEec-cc-----CchHHHHHHHHHHHh
Confidence 43110 0 011 112 23578999999999875 21 1222222222221
Q ss_pred -cCCeeeEEeece------ecCCchhhHHHHHHHHH----cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCE
Q 015110 159 -KRIYVDVGFWGG------LVPENAYNASALEALLN----AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPL 227 (413)
Q Consensus 159 -~~~~~~~~~~~~------~~~~~~~~~~~l~~l~~----~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v 227 (413)
.+..+....... +.....+.+++.+++++ .+...++..+.+.. .+.++++.++++++.|+++|+++
T Consensus 183 G~r~~~~~~~~d~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~~~v~~~l~p~~---~~~~s~e~l~~~~~~A~~~g~~v 259 (476)
T 4aql_A 183 GQRAFVGKVCMDLNDTFPEYKETTEESIKETERFVSEMLQKNYSRVKPIVTPRF---SLSCSETLMGELGNIAKTRDLHI 259 (476)
T ss_dssp TCEEEEECEECSCCSSCTTSCCCHHHHHHHHHHHHHHHHHHTCSSEEECBEECC---TTTSCHHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEeeccccCCCCCcccccCHHHHHHHHHHHHHHHhcCCCCceEEEEeCCc---CCcCCHHHHHHHHHHHHHcCCce
Confidence 111111111100 00011122334444432 22334555555532 24578999999999999999999
Q ss_pred EEec-CChhh
Q 015110 228 LVHA-EMEKG 236 (413)
Q Consensus 228 ~~H~-e~~~~ 236 (413)
++|+ |+..+
T Consensus 260 ~~H~~e~~~e 269 (476)
T 4aql_A 260 QSHISENRDE 269 (476)
T ss_dssp EEEESCSHHH
T ss_pred EEEecCCHHH
Confidence 9996 55443
No 53
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=99.78 E-value=1.2e-17 Score=165.34 Aligned_cols=177 Identities=15% Similarity=0.158 Sum_probs=107.8
Q ss_pred eEEEccEEEcCCCc-eeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCC----c----
Q 015110 45 YWLTSKRIVTPKGV-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE----W---- 115 (413)
Q Consensus 45 lli~n~~vi~~~~~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~----~---- 115 (413)
++|+|++|+++++. .+++|+| ||+|++||+..+.+...++.++||++|++|+|||||+|+|+.++.... .
T Consensus 2 ~~i~~~~v~~~~~~~~~~~v~i-~g~I~~Vg~~~~~~~~~~~~~vid~~g~~v~PGlId~H~H~~~~~~rg~~~~~~l~~ 80 (427)
T 3v7p_A 2 RIIKPFAILTPQTIIQDKAVAF-DKKIEAIDTVENLIKKYPNAAVEHDENSLLLPGFANPHLHLEFSANKATLQYGDFIP 80 (427)
T ss_dssp EEEEEEEEECSSSEEESCEEEE-SSBEEEEECHHHHHHHCTTSEEEEEEEEEEEECEEEEEECGGGTTCSSCSCCSSHHH
T ss_pred EEEECCEEEcCCCEEeCcEEEE-CCEEEEecChhhhccccCCceEEeCCCCEEecCEeecccCcchhhcccccccCCHHH
Confidence 58999999998874 3789999 999999997543211113568999999999999999999997653220 0
Q ss_pred --------------cch----HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCch-
Q 015110 116 --------------EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA- 176 (413)
Q Consensus 116 --------------e~~----~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 176 (413)
++. .....+++++||||+.|+. .. + .. ++... . ... ...+.........
T Consensus 81 wl~~~~~~~~~~~~~~~~~~~~~~~~e~l~~GvTtv~d~~-~~-~--~~---~~a~~-~--~Gi--r~~~~~~~~~~~~~ 148 (427)
T 3v7p_A 81 WLYSVIRHREDLLPLCDGACLEQTLSSIIQTGTTAIGAIS-SY-G--ED---LQACI-D--SAL--KVVYFNEVIGSNAA 148 (427)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTEEEEEEEE-SS-S--TT---HHHHH-H--BSS--EEEEEEEECBCCGG
T ss_pred HHHHHHHhHHhcCHHHHHHHHHHHHHHHHHhCCEEEEEec-Cc-H--HH---HHHHH-h--cCC--eEEEeccccCCChh
Confidence 111 2234568999999999986 21 1 11 12111 1 111 1111111111111
Q ss_pred ---hhHHH----HHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChhhc
Q 015110 177 ---YNASA----LEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKGS 237 (413)
Q Consensus 177 ---~~~~~----l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-e~~~~~ 237 (413)
+..++ ++.....+...++..+.++. ...++++.++.+++.|+++|+++++|+ |+..+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~ 214 (427)
T 3v7p_A 149 TADVMYASFLERFHQSKKHENERFKAAVAIHS---PYSVHYILAKRALDIAKKYGSLVSVHFMESRAER 214 (427)
T ss_dssp GHHHHHHHHHHHHHHHHTTCBTTEEEEEEECC---TTTBCHHHHHHHHHHHHHHTCCEEEEESCSHHHH
T ss_pred hhhHHHHHHHHHHHHhhhccCCceEEEEecCC---CCcCCHHHHHHHHHHHHhCCCCEEEEeCCCHHHH
Confidence 11112 22221112223444444432 234689999999999999999999996 665543
No 54
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=99.77 E-value=4.7e-17 Score=160.37 Aligned_cols=183 Identities=20% Similarity=0.192 Sum_probs=104.5
Q ss_pred cceEEEccEEEcCCC-----c--eeeEEEEECCEEEEcccCCCCCCC-CCCCcEEecCCCEEeeeeeecccccCCCCCC-
Q 015110 43 NQYWLTSKRIVTPKG-----V--ISGAVEIKEGNIISIVSEEDWPRN-SKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT- 113 (413)
Q Consensus 43 ~~lli~n~~vi~~~~-----~--~~~~V~I~dG~I~~Ig~~~~~~~~-~~~~~vID~~G~~vlPGlID~H~H~~~~~~~- 113 (413)
.+++|+|++++++++ . .+++|+|+||||++||+..+.+.. .++.++||++|++|+|||||+|+|+...+..
T Consensus 15 ~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~ 94 (419)
T 2puz_A 15 ATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLSTADETTDCGGRWITPALIDCHTHLVFGGNRA 94 (419)
T ss_dssp CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGSCCSEEEECTTCEEEECEEECCCCCCCSSCCH
T ss_pred CcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhccCCCeEEeCCCCEeCcCceecccCccchhhhH
Confidence 579999999998754 2 478999999999999976433210 0135899999999999999999999654321
Q ss_pred --------------------------------CccchH----HHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHH
Q 015110 114 --------------------------------EWEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAA 157 (413)
Q Consensus 114 --------------------------------~~e~~~----~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
+.+.+. ...+.+++.||||+.++.....+.......++.. +..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~-~~~ 173 (419)
T 2puz_A 95 MEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETELKMLRVA-RRL 173 (419)
T ss_dssp HHHHHHHTTCCHHHHHHTTCSHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECCSCCSHHHHHHHHHHH-HHH
T ss_pred HHHHHHhcCCCHHHHHhcCCCeecchhhhccCCHHHHHHHHHHHHHHHHhcCCeEEEeCCCCCCCchhHHHHHHHH-HHH
Confidence 011111 2236778999999998531111100011122222 222
Q ss_pred hcCCeeeEEe-ecee--cCC-----chhhHH-----HHHHHHHcC-CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc
Q 015110 158 EKRIYVDVGF-WGGL--VPE-----NAYNAS-----ALEALLNAG-VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY 223 (413)
Q Consensus 158 ~~~~~~~~~~-~~~~--~~~-----~~~~~~-----~l~~l~~~G-~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~ 223 (413)
.....+.+.. ..+. .+. ..+..+ .++.....+ +..++.+. . ...++.++++++++.|+++
T Consensus 174 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~a~~~ 247 (419)
T 2puz_A 174 ETLRPVRIVTSYLAAHATPADYKGRNADYITDVVLPGLEKAHAEGLADAVDGFC-E-----GIAFSVKEIDRVFAAAQQR 247 (419)
T ss_dssp TTTSSCEEEEEECCTTCCCGGGTTCHHHHHHHTHHHHHHHHHHTTCCSEECCEE-S-----TTSBCHHHHHHHHHHHHHT
T ss_pred hhhcCceEEEEecccccCchhhcccHHHHHHHHHhhhhhhhhhccccccccccc-C-----CCCcCHHHHHHHHHHHHHC
Confidence 2111122211 1110 000 011111 122222233 33333221 1 1246889999999999999
Q ss_pred CCCEEEecC
Q 015110 224 KRPLLVHAE 232 (413)
Q Consensus 224 g~~v~~H~e 232 (413)
|+++.+|+.
T Consensus 248 g~~v~~H~~ 256 (419)
T 2puz_A 248 GLPVKLHAE 256 (419)
T ss_dssp TCCBEEEES
T ss_pred CCcEEEEec
Confidence 999999984
No 55
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=99.76 E-value=4.1e-17 Score=160.94 Aligned_cols=183 Identities=18% Similarity=0.152 Sum_probs=103.7
Q ss_pred cceEEEc-cEEEcCCC--------------ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeeccccc
Q 015110 43 NQYWLTS-KRIVTPKG--------------VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHL 107 (413)
Q Consensus 43 ~~lli~n-~~vi~~~~--------------~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~ 107 (413)
++++|+| ++|+++++ ..+++|+|+||||++||+...... .+..++||++|++|+|||||+|+|+
T Consensus 5 ~d~li~n~g~I~t~~~~~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~-~~~~~viD~~G~~v~PGfID~H~H~ 83 (421)
T 2bb0_A 5 IDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAEAG-YEADEIIDCSGRLVTPGLVDPHTHL 83 (421)
T ss_dssp EEEEEEEEEEECCCCCSSCCCGGGGTCCCCEEEEEEEEETTEEEEEEETTTTTT-CEEEEEEECTTCEEEECEEECCBCC
T ss_pred ccEEEECCcEEEecCCCccccccccccccccccceEEEECCEEEEEeccccccc-CCCCeEEeCCCCEeccCeeccCcCc
Confidence 4789999 99997653 247899999999999997541100 0135799999999999999999999
Q ss_pred CCCCCCC---------------------------------ccchH----HHHHHHHhCCceEEEeCCCCCCCCCCcHHHH
Q 015110 108 DDPGRTE---------------------------------WEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETL 150 (413)
Q Consensus 108 ~~~~~~~---------------------------------~e~~~----~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~ 150 (413)
...+... .+.+. ...+.++++||||+.++.............+
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~gggi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~ 163 (421)
T 2bb0_A 84 VFGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEKETELKQL 163 (421)
T ss_dssp CCCSCCGGGHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEECCSCCSHHHHHHHH
T ss_pred cccccchHHHHHHHhCCCHHHHhhcCCCcccchhhhhcCCHHHHHHHHHHHHHHHHhcCceEEEeccccCcCccchHHHH
Confidence 7543211 11111 1236778999999998531111000011222
Q ss_pred HHHHHHHhc-CCeeeEEeecee-cCC----c-hhhHHH----HHHHHHcC-CcEEEEeecCCCCCCCCCCCHHHHHHHHH
Q 015110 151 KLKVDAAEK-RIYVDVGFWGGL-VPE----N-AYNASA----LEALLNAG-VLGLKSFMCPSGINDFPMTNASHIKEGLS 218 (413)
Q Consensus 151 ~~~~~~~~~-~~~~~~~~~~~~-~~~----~-~~~~~~----l~~l~~~G-~~~ik~~~~~~~~~~~~~~~~~~l~~~~~ 218 (413)
+...+.... ...+...+.+.. .+. . .+..+. ++.....+ +..++.+. . ...++.++++++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~e~l~~~~~ 237 (421)
T 2bb0_A 164 RVAKKLHESQPVDLVSTFMGAHAIPPEYQNDPDDFLDQMLSLLPEIKEQELASFADIFT-E-----TGVFTVSQSRRYLQ 237 (421)
T ss_dssp HHHHHHHHHSSSEEEEEEEEESSCCGGGTTCHHHHHHHHHTTHHHHHHTTCCSEEEEBB-C-----TTSBCHHHHHHHHH
T ss_pred HHHHHHHhhcCceEEEEeeccccCChhhcccHHHHHHHHHHhhHHhhccCccccccccC-C-----cCCCCHHHHHHHHH
Confidence 222221111 111111111110 010 0 111111 11111223 33444332 1 12468899999999
Q ss_pred HHHhcCCCEEEecC
Q 015110 219 VLARYKRPLLVHAE 232 (413)
Q Consensus 219 ~A~~~g~~v~~H~e 232 (413)
.|+++|+++.+|+.
T Consensus 238 ~a~~~g~~v~~H~~ 251 (421)
T 2bb0_A 238 KAAEAGFGLKIHAD 251 (421)
T ss_dssp HHHHTTCEEEEEEC
T ss_pred HHHHCCCCEEEEec
Confidence 99999999999974
No 56
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=99.75 E-value=2.9e-18 Score=168.03 Aligned_cols=92 Identities=17% Similarity=0.307 Sum_probs=72.2
Q ss_pred CcceEEEccEEEcCCC-ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCC------
Q 015110 42 YNQYWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE------ 114 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~-~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~------ 114 (413)
+++++|+|++|+++++ ...++|+|+||+|++|++... + ++.++||++|++|+|||||+|+|+.......
T Consensus 4 ~~~~~i~~~~i~~~~~~~~~~~v~i~~g~I~~i~~~~~-~---~~~~~id~~g~~~~Pg~~d~h~h~~~~~~~~~~~~~~ 79 (396)
T 3ooq_A 4 SVKILFKNATVFPITSRPFKGDVLVSNGKVEKVGENIE-D---PDAEIVDLTGKFLFPGFVDAHSHIGLFEEGVGYYYSD 79 (396)
T ss_dssp --CEEEEEEEECCSSSCCEEEEEEEETTEEEEEESCCC-C---TTSEEEECTTCEEEECEEEEEECTTTSCTTSCGGGCC
T ss_pred cceEEEECcEEEeCCCCeEEeEEEEECCEEEEecCCCC-C---CCCeEEECCCCEEecCEEecccccCccccCccccccc
Confidence 3578999999999875 345999999999999998654 2 4678999999999999999999997642210
Q ss_pred -------------ccch----HHHHHHHHhCCceEEEeCC
Q 015110 115 -------------WEGF----PSGTKAAAAGGITTLIDMP 137 (413)
Q Consensus 115 -------------~e~~----~~~~~~al~~GvTTv~d~~ 137 (413)
.++. ......++++||||+++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~ 119 (396)
T 3ooq_A 80 GNEATDPVTPHVKALDGFNPQDPAIERALAGGVTSVMIVP 119 (396)
T ss_dssp SCCTTCSBCTTCBGGGGCCTTCHHHHHHHTTTEEEEEECC
T ss_pred cccccCccCccccHhhhcCcCcHHHHHHHhCCeEEEeccC
Confidence 0011 1467889999999999997
No 57
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=99.74 E-value=1e-17 Score=163.21 Aligned_cols=184 Identities=18% Similarity=0.145 Sum_probs=114.5
Q ss_pred eEEEccEEEcCCCc-eeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCC-CC------Ccc
Q 015110 45 YWLTSKRIVTPKGV-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG-RT------EWE 116 (413)
Q Consensus 45 lli~n~~vi~~~~~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~-~~------~~e 116 (413)
++|+|++|+++++. .+++|+|+||||++|++....+ .+.++||++|++|+|||||+|+|+.... +. +.+
T Consensus 2 ~li~~~~v~~~~~~~~~~~v~I~~g~I~~vg~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~g~~~~~~~~~~~~~ 78 (382)
T 1yrr_A 2 YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELP---PEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVE 78 (382)
T ss_dssp EEEESSEEECSSCEESSEEEEEETTEEEEEEEGGGSC---TTCCEEECTTCEEEECEEEEEESEETTEESSSSTTTSSHH
T ss_pred EEEEeeEEEcCCceeeCCEEEEECCEEEEEecCCCCC---ccceeecCCCCEEccCEEEEeecccCCcCccccccCCCHH
Confidence 58999999998774 3789999999999998754322 2468999999999999999999976421 11 234
Q ss_pred chHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHh--cCCeeeEEeecee-cCC-----ch-----hhHHHHH
Q 015110 117 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE--KRIYVDVGFWGGL-VPE-----NA-----YNASALE 183 (413)
Q Consensus 117 ~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~-----~~-----~~~~~l~ 183 (413)
.++..++.++++||||++++. .+.+.....+.+....+... +.....+...+.. .+. .. ...+.++
T Consensus 79 ~~~~~~~~~l~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 157 (382)
T 1yrr_A 79 TLEIMQKANEKSGCTNYLPTL-ITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVD 157 (382)
T ss_dssp HHHHHHHHHHHTTEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHCTTSBCCEEEECSSCCCSCC-CCCSCSCCHHHHHHHH
T ss_pred HHHHHHHHHHhCCeEEEEeec-CCCCHHHHHHHHHHHHHHhhccCCceeEEEEeCCcCCccccCCCCHHHccCCCHHHHH
Confidence 455677899999999999986 33221111112222222222 1112222111111 110 10 1134555
Q ss_pred HHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEE-ecC-ChhhchhhHh
Q 015110 184 ALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV-HAE-MEKGSERHVK 242 (413)
Q Consensus 184 ~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~-H~e-~~~~~~~~~~ 242 (413)
+.+.|...+|.+... ..+.+.++++.|+++|+++++ |+. +.+.+...+.
T Consensus 158 -~~~~~~~~ik~~~~~---------~~~~~~~~~~~a~~~g~~v~~gH~~~~~~~~~~~~~ 208 (382)
T 1yrr_A 158 -FLCENADVITKVTLA---------PEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFR 208 (382)
T ss_dssp -HHHHTTTTEEEEEEC---------GGGSCHHHHHHHHHTTCEEEECSCCCCHHHHHHHHH
T ss_pred -HHHhcCCCEEEEEEC---------CCCChHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH
Confidence 666777777764210 113445789999999999998 985 5665544443
No 58
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=99.73 E-value=9.6e-16 Score=152.59 Aligned_cols=94 Identities=17% Similarity=0.276 Sum_probs=69.3
Q ss_pred CcceEEEccEEE-cCC--C--ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCC---
Q 015110 42 YNQYWLTSKRIV-TPK--G--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT--- 113 (413)
Q Consensus 42 ~~~lli~n~~vi-~~~--~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~--- 113 (413)
..+++|+|++|| +++ . +.+++|+|+||||++||+..+.+. .++++||++|++|+|||||+|+|+.+....
T Consensus 28 p~~llI~na~vi~T~D~~~~vi~~gdV~I~dgrI~aVG~~~~~~~--~~~~vIDa~G~~v~PG~ID~H~H~~~~~~~g~~ 105 (479)
T 3hpa_A 28 PKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPE--TADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVP 105 (479)
T ss_dssp -CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSCS--CCSEEEECTTEEEEECEEECCCCGGGGGSCSCT
T ss_pred CCCEEEECCEEEEeeCCCCCEEcCcEEEEECCEEEEEeCCccCCC--CCCeEEECCCCEEeeCceeHhhCcchhcccccc
Confidence 358999999976 433 3 258999999999999998765442 467899999999999999999998543210
Q ss_pred ---Cc------------------cc----hHHHHHHHHhCCceEEEeCC
Q 015110 114 ---EW------------------EG----FPSGTKAAAAGGITTLIDMP 137 (413)
Q Consensus 114 ---~~------------------e~----~~~~~~~al~~GvTTv~d~~ 137 (413)
.. +. .......++..|+|++.++.
T Consensus 106 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 154 (479)
T 3hpa_A 106 AAQNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHL 154 (479)
T ss_dssp TTTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCB
T ss_pred cCCCcchHHHHhhhhhhhhhcCHHHHHHHHHHHHHHHHHhCCceeccee
Confidence 00 01 11235567899999999986
No 59
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=99.72 E-value=7.3e-17 Score=161.00 Aligned_cols=60 Identities=18% Similarity=0.190 Sum_probs=48.1
Q ss_pred CCcceEEEccEEEcCCC-ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCC
Q 015110 41 PYNQYWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDD 109 (413)
Q Consensus 41 ~~~~lli~n~~vi~~~~-~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~ 109 (413)
+|++++++|+.+. ++ ..+++|+|+||||++|++..+ .++||++|++|+|||||+|+|+.+
T Consensus 10 ~m~~l~~~~~~~~--~~~~~~~~v~I~~g~I~~Ig~~~~-------~~~iD~~g~~v~PGlID~H~H~~~ 70 (458)
T 4f0l_A 10 SQHFIHARQALLP--DGWAENVRIGIAGGVICSIETGVL-------AGPDDERQSVVVAGMANLHSHAFQ 70 (458)
T ss_dssp -CEEEEEEEEEET--TEEEEEEEEEEETTEEEEEECSCC-------CCTTCEEEEEEEECEEEEEECGGG
T ss_pred chhHhhhcceecc--CccccCceEEEECCEEEEEeCCCc-------cccccCCCCEEccCceecccchhh
Confidence 3557888888773 34 358999999999999998642 246999999999999999999853
No 60
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=99.70 E-value=3.5e-16 Score=155.92 Aligned_cols=257 Identities=17% Similarity=0.188 Sum_probs=138.7
Q ss_pred EEccEEEcCCCc-eeeEEEE-ECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCC-----------
Q 015110 47 LTSKRIVTPKGV-ISGAVEI-KEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT----------- 113 (413)
Q Consensus 47 i~n~~vi~~~~~-~~~~V~I-~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~----------- 113 (413)
+..++++.+++. .+++|+| +||+|++|++..+. .+++|++| +|||||||+|+|+.+..+.
T Consensus 4 ~~~~~~~~~~~~~~~~~v~i~~~g~I~~ig~~~~~------~~~~d~~g-~v~PGfId~H~H~~~~~~rg~~~~~~~~~~ 76 (453)
T 3mdu_A 4 IFAERALLPEGWARNVRFEISADGVLAEIRPDANA------DGAERLGG-AVLPGMPNLHSHAFQRAMAGLAEVAGNPND 76 (453)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTSBEEEEESSCCC------TTSEECSS-CEEECEEEEEECGGGGGGTTTTCCCSSTTC
T ss_pred cchhheecCCceecCeEEEEecCCEEEEecCCCCc------ccccccCC-cccccceecccchHHHhhccccccccCCCC
Confidence 446677777775 5899999 89999999986432 24689999 9999999999998533111
Q ss_pred ----------------CccchHH----HHHHHHhCCceEEEeCCCCC-----CCCCCcHHHHHHHHHHHhc-CCeeeEE-
Q 015110 114 ----------------EWEGFPS----GTKAAAAGGITTLIDMPLNS-----DPSTISTETLKLKVDAAEK-RIYVDVG- 166 (413)
Q Consensus 114 ----------------~~e~~~~----~~~~al~~GvTTv~d~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~- 166 (413)
+.++++. ...+++++||||+.++.+.. .+.....+......+.... .....+.
T Consensus 77 ~l~~wl~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~Gir~~~~~ 156 (453)
T 3mdu_A 77 SFWTWRELMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGIGLTLLP 156 (453)
T ss_dssp CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCEEEEEE
T ss_pred cHHHHHHHHhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccccccchhhHHHHHHHHHHHhCCeEEEec
Confidence 1122222 23457899999999974211 1111222233333333221 1111111
Q ss_pred -eec--ee---cCC--------c-hhhHHHHHHHHH----cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCE
Q 015110 167 -FWG--GL---VPE--------N-AYNASALEALLN----AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPL 227 (413)
Q Consensus 167 -~~~--~~---~~~--------~-~~~~~~l~~l~~----~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v 227 (413)
++. +. .+. . .+..+.++++.+ .+. ++.++++. ...+++++++++++.|+ +|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~---~~~~~~e~l~~~~~~A~-~g~~v 229 (453)
T 3mdu_A 157 VLYSHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGH---SLGLCFHS---LRAVTPQQIATVLAAGH-DDLPV 229 (453)
T ss_dssp CBCCBSSTTTCBCCGGGGGGCCCHHHHHHHHHHHHHHHHHHTC---EECEEEEE---TTTSCHHHHHHHHTSSC-TTSCE
T ss_pred chhccccccCCCCchhhhhccCCHHHHHHHHHHHHHHhhcCCC---eEEEecCC---CCcCCHHHHHHHHHHHh-cCCCE
Confidence 110 00 010 1 112233333322 222 23333321 23578999999999999 99999
Q ss_pred EEec-CChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCCh-hhHHHHH
Q 015110 228 LVHA-EMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-SSSLDLL 305 (413)
Q Consensus 228 ~~H~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~-~~~~~~i 305 (413)
++|+ |+...+.......+ .+ .++.+.+... .+.+..+.|+... ++.++.+
T Consensus 230 ~~H~~e~~~e~~~~~~~~g-------------~~-------~v~~l~~~g~--------~~~~~~~~H~~~~~~~~i~~l 281 (453)
T 3mdu_A 230 HIHIAEQQKEVDDCQAWSG-------------RR-------PLQWLYENVA--------VDQRWCLVHATHADPAEVAAM 281 (453)
T ss_dssp EEEESCSHHHHHHHHHHHS-------------SC-------HHHHHHHHSC--------CCTTEEEEECCSCCHHHHHHH
T ss_pred EEEeCCCHHHHHHHHHHhC-------------CC-------HHHHHHHcCC--------CCCCeEEEEcCCCCHHHHHHH
Confidence 9995 66554433222211 00 2222222221 2556677776632 1444444
Q ss_pred HHHHHCCCCEEEEcccccc-ccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCccEEcCCCC
Q 015110 306 MEAKTNGDSITVETCPHYL-AFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHS 370 (413)
Q Consensus 306 ~~ak~~G~~v~~e~~p~~l-~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~ 370 (413)
+ +.| +.+.+||..- .+. .+ .+| +.+.++.|...++|||..
T Consensus 282 a---~~g--~~v~~~P~sn~~lg------~g-----~~p---------~~~~~~~Gv~v~lgtD~~ 322 (453)
T 3mdu_A 282 A---RSG--AVAGLCLSTEANLG------DG-----IFP---------ATDFLAQGGRLGIGSDSH 322 (453)
T ss_dssp H---HHT--CEEEECHHHHHHTT------CC-----CCC---------HHHHHHTTCEEEECCBTC
T ss_pred H---HcC--CEEEECchhHhhcC------CC-----CCC---------HHHHHHCCCEEEEECCCC
Confidence 4 445 4556888521 111 01 222 344456799999999964
No 61
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=99.67 E-value=5.2e-16 Score=157.07 Aligned_cols=65 Identities=22% Similarity=0.266 Sum_probs=52.2
Q ss_pred ceEEEccEEEcCCCc--eeeEEEEECCEEEEcccCCCCCCC--CCCCcEEecCCCEEeeeeeecccccC
Q 015110 44 QYWLTSKRIVTPKGV--ISGAVEIKEGNIISIVSEEDWPRN--SKTGQVVDYGEAVIMPGLIDVHAHLD 108 (413)
Q Consensus 44 ~lli~n~~vi~~~~~--~~~~V~I~dG~I~~Ig~~~~~~~~--~~~~~vID~~G~~vlPGlID~H~H~~ 108 (413)
.++|+|++|+++++. ...+|+|+||||++||+..+.... .++.++||++|++|+|||||+|+|+.
T Consensus 37 ~~li~ng~I~t~~~~~~~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~ 105 (534)
T 3icj_A 37 MKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLD 105 (534)
T ss_dssp EEEEESSEEEEEETTEEEESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHH
T ss_pred CEEEECCEEECCCCCCceeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhh
Confidence 479999999998764 367999999999999975432000 02568999999999999999999963
No 62
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=99.64 E-value=2.5e-15 Score=144.99 Aligned_cols=106 Identities=24% Similarity=0.254 Sum_probs=81.4
Q ss_pred eEEEccEEEcCCCce-eeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCC----CCCCccchH
Q 015110 45 YWLTSKRIVTPKGVI-SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP----GRTEWEGFP 119 (413)
Q Consensus 45 lli~n~~vi~~~~~~-~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~----~~~~~e~~~ 119 (413)
++|+|++|+++++.. +++|+|+||||++|++....+ ++.++||++|++|+|||||+|+|.... ...+++++.
T Consensus 5 ~~i~n~~i~~~~~~~~~~~i~I~dG~I~~i~~~~~~~---~~~~viD~~G~~v~PGfID~HvHg~~G~~~~d~~~~e~l~ 81 (381)
T 3iv8_A 5 YALTNCKIYTGNDVLVKHAVIINGDKIEAVCPIESLP---SEMNVVDLNGANLSPGFIDLQLNGCGGVMFNDEITAETID 81 (381)
T ss_dssp EEEEEEEEECSSCEESSEEEEEETTEEEEEEEGGGSC---TTCEEEEEEEEEEEECEEEEEECEETTEETTTSCSHHHHH
T ss_pred EEEEccEEEcCCCeEeccEEEEECCEEEEEeCCCCCC---CCCeEEECCCCEEccCeEeeeecccCCCCCCCCCCHHHHH
Confidence 589999999998754 579999999999998764322 356899999999999999999997643 113456788
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHH
Q 015110 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKV 154 (413)
Q Consensus 120 ~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~ 154 (413)
..++.++++||||++.+. .+.|.....+.++...
T Consensus 82 ~~~~a~~~~GvTt~l~t~-~T~~~e~l~~al~~~~ 115 (381)
T 3iv8_A 82 TMHKANLKSGCTSFLPTL-ITSSDENMRQAIAAAR 115 (381)
T ss_dssp HHHHHHHHTTEEEEEEEE-ESCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCcccccccc-CCCCHHHHHHHHHHHH
Confidence 889999999999999887 4544333333333333
No 63
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}
Probab=99.62 E-value=8.7e-16 Score=115.07 Aligned_cols=72 Identities=21% Similarity=0.235 Sum_probs=58.3
Q ss_pred CcceEEEccEEEcCCC--ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCC
Q 015110 42 YNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT 113 (413)
Q Consensus 42 ~~~lli~n~~vi~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~ 113 (413)
+.+++|+|++|+++++ ...++|+|+||||++|++........++.++||++|++|+|||||+|+|+..+...
T Consensus 3 ~~~~li~n~~i~~~~~~~~~~~~i~I~~g~I~~ig~~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~p~~~ 76 (81)
T 3ggm_A 3 VPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAIPGLNDSHIHVIRGLEH 76 (81)
T ss_dssp CCSEEEESSEEECSCTTCSEESEEEEETTEEEEEESGGGGGGCCTTCEEEECTTCEEEECCCCTTEEEECCCC-
T ss_pred cCCEEEECCEEEeCCCCCccccEEEEECCEEEEEeCchHhcccCCCCEEEECCCCEEeeCeEeeeeCCCCcccc
Confidence 4689999999999875 35789999999999999754322112356899999999999999999999987543
No 64
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=99.59 E-value=8.8e-14 Score=133.08 Aligned_cols=188 Identities=21% Similarity=0.184 Sum_probs=109.9
Q ss_pred ceEEEccEEEcCCC---ceeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCCccc---
Q 015110 44 QYWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEG--- 117 (413)
Q Consensus 44 ~lli~n~~vi~~~~---~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~--- 117 (413)
..+|+|++|+|+.. ..+++|+|+||||++||+..+.. +++.++||++|++|+|||||+|+|+...+......
T Consensus 3 ~~aI~narviD~~~g~~i~~~~V~I~dG~I~~Ig~~~~~~--~~~~~vID~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~ 80 (403)
T 3mtw_A 3 IKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGDAV--PAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSLE 80 (403)
T ss_dssp EEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTCCC--CTTCEEEEEEEEEEEECEEEEEECTTCCTTCCGGGGGG
T ss_pred cEEEEceEEEECCCCcEecCcEEEEECCEEEEEeCCCCCC--CCCCEEEECCCCEEEeChheeeeCCccccccCcccccc
Confidence 46899999999865 24799999999999999865432 24679999999999999999999998664322110
Q ss_pred ----h-----HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEe------eceecC---------
Q 015110 118 ----F-----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGF------WGGLVP--------- 173 (413)
Q Consensus 118 ----~-----~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--------- 173 (413)
. .......+..|+|+..+... .. ....................... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (403)
T 3mtw_A 81 YSDRFWSVVQTANAKKTLEAGFTTVRNVGA-AD---YDDVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMD 156 (403)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTEEEEEECCC-ST---THHHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGC
T ss_pred ccHHHHhhhhhhhhhhccccccceeecccc-cc---ccchhhhhhhhccccccccccccccccccccccccccccccccc
Confidence 1 11234457899999988762 11 11111111111110000000000 000000
Q ss_pred ----Cc----hhhHHHHHHHHHcCCcEEEEeecCC-----CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhc
Q 015110 174 ----EN----AYNASALEALLNAGVLGLKSFMCPS-----GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGS 237 (413)
Q Consensus 174 ----~~----~~~~~~l~~l~~~G~~~ik~~~~~~-----~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~ 237 (413)
.. .+...........+....+...... ..........+++.++++.|++++.++.+|.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 233 (403)
T 3mtw_A 157 QKNPFNSDSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGI 233 (403)
T ss_dssp CCCTTCCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHH
T ss_pred cccccccchhHHHhhhhHhhhhhcchhhhhhhccccccccccccccccCHHHHHHHHHHHHHcCCeEEEEeccchhH
Confidence 00 0112233344455555544432111 1112234578899999999999999999998766543
No 65
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=99.50 E-value=2.6e-14 Score=137.41 Aligned_cols=94 Identities=21% Similarity=0.285 Sum_probs=69.8
Q ss_pred CCcceEEEccEEEcCCC--c-eeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCCCCC---
Q 015110 41 PYNQYWLTSKRIVTPKG--V-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE--- 114 (413)
Q Consensus 41 ~~~~lli~n~~vi~~~~--~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~--- 114 (413)
.|.+++|+||+|+|+++ . .+++|+|+||||++|++....+ ++.++||++|++|+|||||+|+|+...+...
T Consensus 2 sM~~lli~ng~i~d~~~~~~~~~~dV~I~~G~I~~Ig~~~~~~---~~~~vID~~G~~v~PGfID~H~H~~~~~~~~~~~ 78 (426)
T 3mkv_A 2 SLTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKS---SNAHVIDVKGKTIMPGLIDLHVHVVAIEFNLPRV 78 (426)
T ss_dssp -CCEEEEEEEEECCTTSSSCEEEEEEEEETTEEEEEESSCCCC---SSCEEEECTTCEEEECEEEEEECTTCCSSCHHHH
T ss_pred CcCcEEEECeEEEeCCCCcEecCcEEEEECCEEEEecCCCCCC---CCCEEEECCCCEEEeChhhhhhCcccccCCcccc
Confidence 46799999999999875 2 4689999999999999865433 4679999999999999999999987654321
Q ss_pred --ccchH------HHHHHHHhCCceEEEeCC
Q 015110 115 --WEGFP------SGTKAAAAGGITTLIDMP 137 (413)
Q Consensus 115 --~e~~~------~~~~~al~~GvTTv~d~~ 137 (413)
..... .........++|+.....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (426)
T 3mkv_A 79 ATLPNVLVTLRAVPIMRAMLRRGFTTVRDAG 109 (426)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTEEEEEECS
T ss_pred cccchhHHHHHHHhhhhhhhccccccccccc
Confidence 11111 123344677888877654
No 66
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=99.47 E-value=4.7e-14 Score=137.09 Aligned_cols=85 Identities=26% Similarity=0.352 Sum_probs=63.2
Q ss_pred eeeEEEEECCEEEEcccCCCCCCCCCCCcEEecCCCEEeeeeeecccccCCCC-CCCccchHHHHHHHHhCCceEEEeCC
Q 015110 59 ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG-RTEWEGFPSGTKAAAAGGITTLIDMP 137 (413)
Q Consensus 59 ~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~-~~~~e~~~~~~~~al~~GvTTv~d~~ 137 (413)
.+++|+|+||||++|++ . + || +|++|+|||||+|+|+.+++ +... ++...+++++++||||+++++
T Consensus 28 ~~~~V~I~~g~I~~vg~---------~-~-iD-~g~~v~PGlID~H~H~~~~~~~~~~-~l~~~~~~~l~~GvTtv~d~~ 94 (376)
T 1o12_A 28 FTGDVEIEEGKIVKVEK---------R-E-CI-PRGVLMPGFVDPHIHGVVGADTMNC-DFSEMEEFLYSQGVTTFLATT 94 (376)
T ss_dssp EEEEEEEETTEEEEEEE---------C-C-SC-CSSEEEECEEEEEECEETTEETTTT-CHHHHHHHHHTTTEEEEEEEC
T ss_pred cCceEEEECCEEEEeCC---------C-c-cC-CCCEEccCeEEEeecCCCCCCCChh-hHHHHHHHHHhCCcEEEEecc
Confidence 58899999999999975 1 4 89 99999999999999998664 3222 467778999999999999998
Q ss_pred CCCCCCCCcHHHHHHHHHHH
Q 015110 138 LNSDPSTISTETLKLKVDAA 157 (413)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~ 157 (413)
++.|.....+.++...+..
T Consensus 95 -~~~~~~~~~~~~~~~~~~~ 113 (376)
T 1o12_A 95 -VSTSLEKMKEILRKARDYI 113 (376)
T ss_dssp -CSCCHHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHh
Confidence 4433222223344443433
No 67
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=98.88 E-value=4e-08 Score=91.30 Aligned_cols=207 Identities=15% Similarity=0.146 Sum_probs=112.8
Q ss_pred eeeecccccCCCCC----------CCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEee
Q 015110 99 GLIDVHAHLDDPGR----------TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 168 (413)
Q Consensus 99 GlID~H~H~~~~~~----------~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (413)
|+||+|+|+..++. ...+......+.+.++|||++++++ .. +...+.+.+.+..+.. . +++...
T Consensus 6 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~iv~~~-~~-~~~~~~~~~~~~~~~~---~-~~v~~~ 79 (291)
T 1bf6_A 6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMT-NR-YMGRNAQFMLDVMRET---G-INVVAC 79 (291)
T ss_dssp SEEEEEECSSEECHHHHTCGGGEECCHHHHHHHHHHHHHTTEEEEEECC-CG-GGTCCHHHHHHHHHHH---C-CEEEEE
T ss_pred ceeeeccCeecCCcccccCCCcccCCHHHHHHHHHHHHHcCCCEEEecC-CC-cCCCCHHHHHHHHHhc---C-CeEEEe
Confidence 99999999964321 1112233456677899999999987 22 1112233333322221 1 222222
Q ss_pred cee-----cCC-----chhhH-HHHHHHHHcCCc-------EEE-EeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEE
Q 015110 169 GGL-----VPE-----NAYNA-SALEALLNAGVL-------GLK-SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV 229 (413)
Q Consensus 169 ~~~-----~~~-----~~~~~-~~l~~l~~~G~~-------~ik-~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~ 229 (413)
.++ .+. ..+.+ +.+.+.+..|+. .++ +.+.+. .......+.+++.++.|+++|++|.+
T Consensus 80 ~G~~~~~~hP~~~~~~~~~~l~~~~~~~l~~gi~~~~~~~~~iGe~gld~~---~~~~~~~~~~~~~~~~a~~~~~pv~i 156 (291)
T 1bf6_A 80 TGYYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEG---KITPLEEKVFIAAALAHNQTGRPIST 156 (291)
T ss_dssp ECCCCGGGCCTHHHHSCHHHHHHHHHHHHHTCSTTSSCCEEEEEEEECBTT---BCCHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred eccccCccCcHhhhcCCHHHHHHHHHHHHHhccCCcCcceeeEEEEecCCC---CCCHHHHHHHHHHHHHHHHHCCeEEE
Confidence 222 221 11122 333444444431 221 112111 01111234688899999999999999
Q ss_pred ecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHH
Q 015110 230 HAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAK 309 (413)
Q Consensus 230 H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak 309 (413)
|+++... +. +.++++++.+ ....++++.|++.. .+.+.++++.
T Consensus 157 H~~~~~~-------------------------------~~-~~~~~l~~~~----~~~~~~~i~H~~~~-~~~~~~~~~~ 199 (291)
T 1bf6_A 157 HTSFSTM-------------------------------GL-EQLALLQAHG----VDLSRVTVGHCDLK-DNLDNILKMI 199 (291)
T ss_dssp ECGGGCS-------------------------------HH-HHHHHHHHTT----CCGGGEEECCCCSS-CCHHHHHHHH
T ss_pred eCCCCCC-------------------------------hH-HHHHHHHHcC----CCchhEEEECCCCC-CCHHHHHHHH
Confidence 9964210 00 2334444321 12457899999654 4567888888
Q ss_pred HCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCcc--EEcCCC
Q 015110 310 TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--MLSSDH 369 (413)
Q Consensus 310 ~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~--~i~sDh 369 (413)
++|..++++.+.. . . .+| .....+.+++.++.|.+| .++||.
T Consensus 200 ~~G~~i~~~~~~~-~----------~-----~~~--~~~~~~~~~~~~~~~~~dril~~TD~ 243 (291)
T 1bf6_A 200 DLGAYVQFDTIGK-N----------S-----YYP--DEKRIAMLHALRDRGLLNRVMLSMDI 243 (291)
T ss_dssp HTTCEEEECCTTC-T----------T-----TSC--HHHHHHHHHHHHHTTCGGGEEECCCC
T ss_pred HCCCEEEEccCcc-c----------C-----CCC--HHHHHHHHHHHHHhCCCCeEEEcCCC
Confidence 8898887764320 0 0 122 234677899999999777 789998
No 68
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=98.40 E-value=7.6e-06 Score=76.78 Aligned_cols=210 Identities=19% Similarity=0.213 Sum_probs=105.3
Q ss_pred eeeecccccCCCCCCC-----c-----cchH---HHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeE
Q 015110 99 GLIDVHAHLDDPGRTE-----W-----EGFP---SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV 165 (413)
Q Consensus 99 GlID~H~H~~~~~~~~-----~-----e~~~---~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (413)
|+||+|+|+....... . .+.. .....+.+.|||++++.+.. ......+.+.+..+......+...
T Consensus 17 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iv~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~ 94 (314)
T 2vc7_A 17 GFTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVM--GLGRDIRFMEKVVKATGINLVAGT 94 (314)
T ss_dssp CSEESSCBSCBCCHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECCCB--TTTCCHHHHHHHHHHHCCEEEECE
T ss_pred CCcccccccccCcchhcccCcchhhhcccHHHHHHHHHHHHHcCCCEEEecCCC--CCCcCHHHHHHHHHHcCCeEEEEe
Confidence 9999999997532110 0 1111 12366789999999988622 111223333332222110122223
Q ss_pred Eeeceec-CCc--hhhHHHHHHHHH----cCC--cE-----EEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015110 166 GFWGGLV-PEN--AYNASALEALLN----AGV--LG-----LKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (413)
Q Consensus 166 ~~~~~~~-~~~--~~~~~~l~~l~~----~G~--~~-----ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 231 (413)
+++.... +.. ....+++.+++. .|+ .+ +++.+.+.. ......+.+++.++.|+++|+||.+|+
T Consensus 95 G~hp~~~~~~~~~~~~~~~l~~~~~~~~~~gige~G~~~g~i~~~ld~~~---~~~~q~~~~~~~~~lA~~~~~pv~iH~ 171 (314)
T 2vc7_A 95 GIYIYIDLPFYFLNRSIDEIADLFIHDIKEGIQGTLNKAGFVKIAADEPG---ITKDVEKVIRAAAIANKETKVPIITHS 171 (314)
T ss_dssp EBCCSSCCCGGGTTCCHHHHHHHHHHHHHTCSSSSSCCCCSEEEECCTTC---SCHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred ecCCCCCCchhhhccCHHHHHHHHHHHHHhhcccCCCCCCeEEEeecCCC---CCHHHHHHHHHHHHHHHHHCCEEEEeC
Confidence 3322110 000 112445554442 222 12 232222211 011123457788999999999999998
Q ss_pred CC--hhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHH
Q 015110 232 EM--EKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAK 309 (413)
Q Consensus 232 e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak 309 (413)
.. ... .+++++.++.+ ....++.+.|+... ...+.++++.
T Consensus 172 ~~~~~~~---------------------------------~~~~~~l~~~~----~~~~~~~i~H~~~~-~~~~~~~~~~ 213 (314)
T 2vc7_A 172 NAHNNTG---------------------------------LEQQRILTEEG----VDPGKILIGHLGDT-DNIDYIKKIA 213 (314)
T ss_dssp CTTTTHH---------------------------------HHHHHHHHHTT----CCGGGEEETTGGGC-CCHHHHHHHH
T ss_pred CCcccCh---------------------------------HHHHHHHHHcC----CCcccEEEECCCCC-CCHHHHHHHH
Confidence 51 110 12333344321 11346788998643 3356677777
Q ss_pred HCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCcc--EEcCCC
Q 015110 310 TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--MLSSDH 369 (413)
Q Consensus 310 ~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~--~i~sDh 369 (413)
+.|..+..+.+.. . ++ + +....++.+.+.+..|..| .++||.
T Consensus 214 ~~G~~i~~~~~~~-~-----------~~----~--~~~~~~~~i~~~~~~g~~drilleTD~ 257 (314)
T 2vc7_A 214 DKGSFIGLDRYGL-D-----------LF----L--PVDKRNETTLRLIKDGYSDKIMISHDY 257 (314)
T ss_dssp HTTCEEEECCTTC-T-----------TT----S--CHHHHHHHHHHHHHTTCTTTEEECCCC
T ss_pred HcCCEEEEeCCCc-c-----------cC----C--CHHHHHHHHHHHHHcCCCCeEEEcCCc
Confidence 7887666543211 0 00 1 1133456676777776667 999998
No 69
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=98.23 E-value=2.3e-05 Score=71.36 Aligned_cols=123 Identities=20% Similarity=0.193 Sum_probs=67.0
Q ss_pred eeecccccCCCCCCCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCc----
Q 015110 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN---- 175 (413)
Q Consensus 100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 175 (413)
+||+|+|+....+. .+.......+.+.||++++.... .+ .+.+.+.. ...... ++....++.+..
T Consensus 5 ~iD~H~Hl~~~~~~--~~~~~~l~~~~~~Gv~~~v~~~~--~~--~~~~~~~~---l~~~~~--~~~~~~G~hP~~~~~~ 73 (259)
T 1zzm_A 5 FIDTHCHFDFPPFS--GDEEASLQRAAQAGVGKIIVPAT--EA--ENFARVLA---LAENYQ--PLYAALGLHPGMLEKH 73 (259)
T ss_dssp EEESCBCTTSTTTT--TCHHHHHHHHHHTTEEEEEEECC--SG--GGHHHHHH---HHHHCT--TEEEEECCCGGGGGGC
T ss_pred EEEeeecCCchhhc--cCHHHHHHHHHHcCCCEEEEecC--CH--HHHHHHHH---HHHhCC--CeEEEEEecccccccC
Confidence 89999999865332 23455677788999999987641 11 22222222 222222 121122232221
Q ss_pred -hhhHHHHHHHHHc---CCcEEE-EeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 176 -AYNASALEALLNA---GVLGLK-SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 176 -~~~~~~l~~l~~~---G~~~ik-~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
.+..++++++++. ++.++. +.+.+...........+.++..++.|+++|+||.+|+.+
T Consensus 74 ~~~~~~~l~~~~~~~~~~~~~iGEiGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~ 136 (259)
T 1zzm_A 74 SDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRR 136 (259)
T ss_dssp CHHHHHHHHHHHHHCCSSEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecc
Confidence 2345677766643 444442 222211000000123457889999999999999999864
No 70
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=98.21 E-value=6.8e-06 Score=77.81 Aligned_cols=223 Identities=15% Similarity=0.135 Sum_probs=109.7
Q ss_pred eeeecccccCCCCCCC-----c-----cchHH----HHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeee
Q 015110 99 GLIDVHAHLDDPGRTE-----W-----EGFPS----GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 164 (413)
Q Consensus 99 GlID~H~H~~~~~~~~-----~-----e~~~~----~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (413)
||||+|+|+...+... . ++... ....+.+.|||++++... . ....+.+.+....+......+..
T Consensus 16 GliD~H~HL~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~~-~-~~~~~~~~~~~la~~~~~~i~~~ 93 (330)
T 2ob3_A 16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVST-F-DIGRDVSLLAEVSRAADVHIVAA 93 (330)
T ss_dssp CSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCC-G-GGTCCHHHHHHHHHHHTCEEECE
T ss_pred CCceeeeCeecCCchhccCCCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCCC-C-CcCCCHHHHHHHHHHhCCcEEEE
Confidence 9999999997632110 0 11212 256688999999998862 1 11123344433322221122333
Q ss_pred EEeeceecCC-----chhhH-HHHHHHHHcC-------CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015110 165 VGFWGGLVPE-----NAYNA-SALEALLNAG-------VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (413)
Q Consensus 165 ~~~~~~~~~~-----~~~~~-~~l~~l~~~G-------~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 231 (413)
.++|. ..+. ..+.+ +.+.+.+..| +..+++.+. . .......+.+++.++.|+++|+||++|+
T Consensus 94 ~G~hp-~~p~~~~~~~~~~l~~~l~~~~~~gi~~~~~k~~aiEiGld-~---~~~~~q~~~f~~q~~lA~~~glPv~iH~ 168 (330)
T 2ob3_A 94 TGLWF-DPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATT-G---KATPFQELVLKAAARASLATGVPVTTHT 168 (330)
T ss_dssp EECCS-CCCHHHHTCCHHHHHHHHHHHHHTCSTTSCCCCSEEEEECS-S---SCCHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred ecCCc-CCCchhccCCHHHHHHHHHHHHHhhccccccceeEEEEeCC-C---CCCHHHHHHHHHHHHHHHHhCCeEEEEC
Confidence 44442 1111 11122 2233333222 334455443 1 1111123348888999999999999998
Q ss_pred CChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccC-ChhhHHHHHHHHHH
Q 015110 232 EMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS-DASSSLDLLMEAKT 310 (413)
Q Consensus 232 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s-~~~~~~~~i~~ak~ 310 (413)
....- .+. +++++.++.+. ...++.+.|+. +. +.+.++++.+
T Consensus 169 ~~~~r------------------------------~a~-e~l~iL~~~g~----~~~~~~i~H~f~~~--~~e~a~~~~~ 211 (330)
T 2ob3_A 169 AASQR------------------------------DGE-QQAAIFESEGL----SPSRVCIGHSDDTD--DLSYLTALAA 211 (330)
T ss_dssp CGGGT------------------------------HHH-HHHHHHHHTTC----CGGGEEECSGGGCC--CHHHHHHHHH
T ss_pred CCCCC------------------------------CHH-HHHHHHHHcCc----CcccEEEeCCCCCC--CHHHHHHHHh
Confidence 52110 022 33444444310 12355788986 43 3677888888
Q ss_pred CCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCcc--EEcCCC
Q 015110 311 NGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--MLSSDH 369 (413)
Q Consensus 311 ~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~--~i~sDh 369 (413)
.|..+..++... ..+........-... ..++ .....+.|.+.++.|-.| .+.||.
T Consensus 212 ~G~~i~~~~~G~-~tf~~~~~~~~~~~~-~~~~--~~~~~~~l~~~~~~~p~drilleTD~ 268 (330)
T 2ob3_A 212 RGYLIGLDHIPY-SAIGLEDNASASALL-GIRS--WQTRALLIKALIDQGYMKQILVSNDW 268 (330)
T ss_dssp TTCEEEECCTTC-CCTTCTTCHHHHHHH-CSSC--HHHHHHHHHHHHHTTCGGGEEECCCC
T ss_pred CCCEEEeCCCcc-ccccccccccccccc-cCCC--HHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence 898777663111 111000000000000 0011 123345688888888666 799997
No 71
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.19 E-value=4.4e-05 Score=69.99 Aligned_cols=127 Identities=15% Similarity=0.199 Sum_probs=66.7
Q ss_pred eeeecccccCCCCCCCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeecee-cCC---
Q 015110 99 GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGL-VPE--- 174 (413)
Q Consensus 99 GlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 174 (413)
++||+|+|+....+. .+.......+.+.||+++++.+. .+ .+.+.+....+......+..++++... ...
T Consensus 5 ~~iD~H~Hl~~~~~~--~~~~~~l~~~~~~Gv~~~v~~~~--~~--~~~~~~~~l~~~~~~~i~~~~GihP~~~~~~~~~ 78 (272)
T 2y1h_A 5 GLVDCHCHLSAPDFD--RDLDDVLEKAKKANVVALVAVAE--HS--GEFEKIMQLSERYNGFVLPCLGVHPVQGLPPEDQ 78 (272)
T ss_dssp CEEEEEECTTSGGGT--TTHHHHHHHHHHTTEEEEEECCS--SG--GGHHHHHHHHHHTTTTEEEEECCCSBC-------
T ss_pred cEEEEeeCCCchhhh--cCHHHHHHHHHHCCCCEEEEeCC--CH--HHHHHHHHHHHHCCCCEEEEEEECCCcccccccc
Confidence 599999999764321 24455677788999999998862 11 222222222222111122222222111 110
Q ss_pred ---chhhHHHHHHHHH---cCCcEEEE-eecCCCCCCCC------CCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 175 ---NAYNASALEALLN---AGVLGLKS-FMCPSGINDFP------MTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 175 ---~~~~~~~l~~l~~---~G~~~ik~-~~~~~~~~~~~------~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
..+.++++.++++ ..+.++.- .+.+.. .+. ....+.++..++.|+++|+||.+|+.+
T Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~iGE~Gld~~~--~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~~ 148 (272)
T 2y1h_A 79 RSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSP--RFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRS 148 (272)
T ss_dssp CBCCHHHHHHHHHHHHHHGGGCSEEEEEECCCCT--TTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred ccCCHHHHHHHHHHHHhCCCCEEEEEeccCCCcc--ccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCC
Confidence 1123455666554 24445432 222100 000 012447889999999999999999964
No 72
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=98.02 E-value=0.00014 Score=67.50 Aligned_cols=126 Identities=15% Similarity=0.100 Sum_probs=74.7
Q ss_pred eeeeeecccccCCCCCC--------C--ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEE
Q 015110 97 MPGLIDVHAHLDDPGRT--------E--WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVG 166 (413)
Q Consensus 97 lPGlID~H~H~~~~~~~--------~--~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (413)
=|++||+|+|+....+. . ..+.......+-+.||+.++....+. ....+. .+.+..+....+ . ++
T Consensus 24 p~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~~~~-~~~~n~-~~~~~~~~~p~r-~--~g 98 (294)
T 4i6k_A 24 KMNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQPSF-LGTNNQ-AMLNAIQQYPDR-L--KG 98 (294)
T ss_dssp -CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEECCGG-GTTCCH-HHHHHHHHSTTT-E--EE
T ss_pred CCCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEecCcc-cccchH-HHHHHHHHCCCe-E--EE
Confidence 34789999999864331 0 23455566778899999888664111 111222 222222221111 1 11
Q ss_pred eeceecCCchhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 167 FWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 167 ~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
..++.+.. ..++++++.+.|+.++++..... ..+....+.+...++.|+++|+++.+|+..
T Consensus 99 -~~~v~P~~--~~~eL~~l~~~gv~Gi~l~~~~~---~~~~~~~~~~~~~~~~a~~~glpv~iH~~~ 159 (294)
T 4i6k_A 99 -IAVVQHTT--TFNELVNLKAQGIVGVRLNLFGL---NLPALNTPDWQKFLRNVESLNWQVELHAPP 159 (294)
T ss_dssp -EECCCTTC--CHHHHHHHHTTTEEEEEEECTTS---CCCCSSSHHHHHHHHHHHHTTCEEEEECCH
T ss_pred -EEEeCCcc--cHHHHHHHHHCCCcEEEeccCCC---CCCCcccHHHHHHHHHHHHcCCEEEEeeCc
Confidence 12233322 24678888888999998654321 112345688999999999999999999963
No 73
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.01 E-value=9.8e-05 Score=67.27 Aligned_cols=122 Identities=14% Similarity=0.101 Sum_probs=67.2
Q ss_pred eeecccccCCCCCCCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCc----
Q 015110 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN---- 175 (413)
Q Consensus 100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 175 (413)
+||+|+|+....+. .+.....+.+.+.||++++.... +.+..+...+.+..... +....++.+..
T Consensus 5 ~iD~H~Hl~~~~~~--~~~~~~l~~~~~~Gv~~~v~~~~-------~~~~~~~~~~l~~~~~~--i~~~~G~hP~~~~~~ 73 (264)
T 1xwy_A 5 MFDIGVNLTSSQFA--KDRDDVVACAFDAGVNGLLITGT-------NLRESQQAQKLARQYSS--CWSTAGVHPHDSSQW 73 (264)
T ss_dssp CEEEEECTTSGGGT--TTHHHHHHHHHHTTCCEEEECCC-------SHHHHHHHHHHHHHSTT--EEEEECCCGGGGGGC
T ss_pred EEEEeeCCCChhhc--cCHHHHHHHHHHCCCCEEEEeCC-------CHHHHHHHHHHHHhCCC--EEEEEEECCcccccC
Confidence 89999999764321 23455567788999999987751 12333333333333221 11122233221
Q ss_pred -hhhHHHHHHHHHc-CCcEEE-EeecCCCCCCCC-CCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 176 -AYNASALEALLNA-GVLGLK-SFMCPSGINDFP-MTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 176 -~~~~~~l~~l~~~-G~~~ik-~~~~~~~~~~~~-~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
.+..++++++++. ++.++. +.+.+.. ...+ ....+.++..++.|+++|+||.+|+.+
T Consensus 74 ~~~~~~~l~~~~~~~~~~~iGE~Gld~~~-~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~~ 134 (264)
T 1xwy_A 74 QAATEEAIIELAAQPEVVAIGECGLDFNR-NFSTPEEQERAFVAQLRIAADLNMPVFMHCRD 134 (264)
T ss_dssp CHHHHHHHHHHHTSTTEEEEEEEEEETTT-CSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred CHHHHHHHHHHhcCCCeEEEEEeccCCCC-CCCcHHHHHHHHHHHHHHHHHhCCcEEEEcCC
Confidence 1245667776653 344442 2222210 0000 112245889999999999999999853
No 74
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=97.94 E-value=0.00013 Score=67.40 Aligned_cols=126 Identities=14% Similarity=0.132 Sum_probs=71.3
Q ss_pred eeeecccccCCCCCCCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCe--eeEEeeceecCC--
Q 015110 99 GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY--VDVGFWGGLVPE-- 174 (413)
Q Consensus 99 GlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-- 174 (413)
-|||+|+|+....+ .++.....+.|.+.||..++..+. +.+......+.+..... ..+....|+.|.
T Consensus 2 ~~iD~H~HL~~~~~--~~d~~~vl~~a~~~gV~~~v~~g~-------~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~ 72 (287)
T 3rcm_A 2 QLIDIGVNLTNSSF--HDQQAAIVERALEAGVTQMLLTGT-------SLAVSEQALELCQQLDASGAHLFATAGVHPHDA 72 (287)
T ss_dssp CEEEEEECTTCGGG--TTCHHHHHHHHHHTTEEEEEECCC-------SHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGG
T ss_pred ceEEEeecCCchhc--ccCHHHHHHHHHHcCCeEEEEecC-------CHHHHHHHHHHHHhCCCCCceEEEEEEECcCcc
Confidence 38999999986533 235566678889999999986641 23344444433332111 001122233332
Q ss_pred ---chhhHHHHHHHHHc-CCcEEE-EeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 175 ---NAYNASALEALLNA-GVLGLK-SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 175 ---~~~~~~~l~~l~~~-G~~~ik-~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
..+.++.++++++. .+.++. +.+.+...........+.+.+.++.|+++|+||.+|+.+
T Consensus 73 ~~~~~~~~~~l~~l~~~~~vvaIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r~ 136 (287)
T 3rcm_A 73 KAWDTDSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERD 136 (287)
T ss_dssp GGCCTTHHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred ccCCHHHHHHHHHHhcCCCeEEEEEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 22346777777754 344442 222221000000113567899999999999999999964
No 75
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=97.89 E-value=0.00012 Score=68.31 Aligned_cols=126 Identities=15% Similarity=0.099 Sum_probs=70.7
Q ss_pred eeeecccccCCCCCCC--------ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeece
Q 015110 99 GLIDVHAHLDDPGRTE--------WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG 170 (413)
Q Consensus 99 GlID~H~H~~~~~~~~--------~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (413)
.+||+|+|+....+.. ..+.....+.+.+.||++++.... +.+......+.+.... ++....+
T Consensus 2 ~~iD~H~Hl~~~~~~~~~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~~-------~~~~~~~~~~la~~~~--~v~~~~G 72 (301)
T 2xio_A 2 KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGG-------NLQDSKDALHLAQTNG--MFFSTVG 72 (301)
T ss_dssp CEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECCC-------SHHHHHHHHHHHTTCT--TEEEEEC
T ss_pred eEEEEcCCCCChHhcccccccccCccCHHHHHHHHHHCCCCEEEEeCC-------CHHHHHHHHHHHHHCC--CEEEEEE
Confidence 5899999997653321 135556677788999999997741 2334444444444322 2222233
Q ss_pred ecCCch---------hhHHHHHHHHHc---CCcEEE-EeecCCCCCCCC-CCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 171 LVPENA---------YNASALEALLNA---GVLGLK-SFMCPSGINDFP-MTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 171 ~~~~~~---------~~~~~l~~l~~~---G~~~ik-~~~~~~~~~~~~-~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
+.+... +.+++++++++. .+.++. +.+.+.-....+ ....+.++..++.|+++|+||.+|+.+
T Consensus 73 iHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r~ 149 (301)
T 2xio_A 73 CHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRN 149 (301)
T ss_dssp CCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTEEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEES
T ss_pred ECcChhhhCcccccHHHHHHHHHHHhcCCCCeEEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecC
Confidence 333221 235667776653 344442 122211000000 112357888999999999999999954
No 76
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=97.87 E-value=0.00015 Score=66.03 Aligned_cols=121 Identities=21% Similarity=0.311 Sum_probs=68.7
Q ss_pred eeecccccCCCCCCC-ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCch--
Q 015110 100 LIDVHAHLDDPGRTE-WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA-- 176 (413)
Q Consensus 100 lID~H~H~~~~~~~~-~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 176 (413)
+||+|+|+..+.+.. ..+.....+.+.+.||++++.... .....+...+...... ++....++.+...
T Consensus 3 ~iD~H~Hl~~~~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~-------~~~~~~~~~~~~~~~p--~~~~~~g~hP~~~~~ 73 (265)
T 1yix_A 3 LVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVAT-------TLPSYLHMRDLVGERD--NVVFSCGVHPLNQND 73 (265)
T ss_dssp EEEEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECCS-------SHHHHHHHHHHHCSCT--TEEEEECCCTTCCSS
T ss_pred EEEEeeCCCchhhcccccCHHHHHHHHHHCCCCEEEEeCC-------CHHHHHHHHHHHHHCC--CeEEEEEeCCCcccc
Confidence 899999998654311 234556677788999999887541 1233333333333322 2222223333221
Q ss_pred -hhHHHHHHHHHc------CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 177 -YNASALEALLNA------GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 177 -~~~~~l~~l~~~------G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
...++++++++. |..|++.+.... ......+.+...++.|+++|+||.+|+.+
T Consensus 74 ~~~~~~l~~~~~~~~~~~iGe~Gl~~~~~~~----~~~~q~~~~~~~~~~a~~~~~pv~iH~~~ 133 (265)
T 1yix_A 74 PYDVEDLRRLAAEEGVVALGETGLDYYYTPE----TKVRQQESFIHHIQIGRELNKPVIVHTRD 133 (265)
T ss_dssp CCCHHHHHHHHTSTTEEEEEEEEEECTTCSS----CHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred cchHHHHHHHhccCCeEEEEccccCCCcCCC----ChHHHHHHHHHHHHHHHHhCCCEEEEecC
Confidence 135778777653 223343221110 01224567899999999999999999853
No 77
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=97.86 E-value=0.00016 Score=67.70 Aligned_cols=128 Identities=16% Similarity=0.088 Sum_probs=72.7
Q ss_pred eeeecccccCCCCCC--------CccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCC---eeeEEe
Q 015110 99 GLIDVHAHLDDPGRT--------EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI---YVDVGF 167 (413)
Q Consensus 99 GlID~H~H~~~~~~~--------~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 167 (413)
-|||+|+|+..+.+. ..++.......|...||..++..+. +.+.....++.+.... ..++..
T Consensus 27 ~~iDtH~HL~~~~f~g~y~gk~~h~~d~~~vl~rA~~aGV~~ii~~g~-------~~~~~~~~~~La~~~~~~~~~~v~~ 99 (325)
T 3ipw_A 27 QFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITSG-------CLNDFKKAIEIINKYQNLTNIKLVT 99 (325)
T ss_dssp CEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCC-------SHHHHHHHHHHHHHHGGGCSSEEEE
T ss_pred CeEEEEECCCchHhccccccccccccCHHHHHHHHHHcCCcEEEEccC-------CHHHHHHHHHHHHHCCCcccceEEE
Confidence 599999999876441 1356667788899999999987651 2334444444433211 001222
Q ss_pred eceecCCc-----hh-hHHHHHHHHHc---CCcEEE-EeecCCCCCCCC-CCCHHHHHHHHHHHHh-cCCCEEEecCC
Q 015110 168 WGGLVPEN-----AY-NASALEALLNA---GVLGLK-SFMCPSGINDFP-MTNASHIKEGLSVLAR-YKRPLLVHAEM 233 (413)
Q Consensus 168 ~~~~~~~~-----~~-~~~~l~~l~~~---G~~~ik-~~~~~~~~~~~~-~~~~~~l~~~~~~A~~-~g~~v~~H~e~ 233 (413)
..|+.|.. .+ .+++++++++. .+++|. +.+.+.-....+ ....+.+++.++.|++ +++||.+|+++
T Consensus 100 ~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r~ 177 (325)
T 3ipw_A 100 TIGVHPTRTNELKQEGYLDELLLLCEKNIDKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCRK 177 (325)
T ss_dssp EECCCGGGGGGGGSTTHHHHHHHHHHHTGGGEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEES
T ss_pred EEEECcchhhcCCchHHHHHHHHHHhcCCCCEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeCc
Confidence 22333221 12 46777777753 344442 222221000000 1124578888999999 99999999965
No 78
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=97.77 E-value=0.00052 Score=62.40 Aligned_cols=171 Identities=15% Similarity=0.109 Sum_probs=86.7
Q ss_pred eeecccccCCCCCCCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcH---HHHHHHHH----HHhcCCeeeEEeeceec
Q 015110 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTIST---ETLKLKVD----AAEKRIYVDVGFWGGLV 172 (413)
Q Consensus 100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~ 172 (413)
+||+|+|+....+ .....+...||+.++....+........ +.+...++ .+.... .++....|+.
T Consensus 2 ~iDtH~Hld~~~~-------~~l~~a~~~GV~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~-~~v~~~~GiH 73 (261)
T 3guw_A 2 YFDSHLHSEGLGF-------SELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAG-VKMHPAVGIH 73 (261)
T ss_dssp CCBCCCCGGGCCH-------HHHHHHHTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHHTTT-CEECCBCCCC
T ss_pred eEEeccCCCCCCh-------HHHHHHHHCCCcEEEEeccCccccchhhhHHHHHHHHHHHHHHHHHHCC-CCEEEEEEEC
Confidence 7999999985432 2356788999999986652211111111 22222221 122211 1222222333
Q ss_pred CCc--hhhHHHHHHHHHcCCcEE-EEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCC
Q 015110 173 PEN--AYNASALEALLNAGVLGL-KSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLD 249 (413)
Q Consensus 173 ~~~--~~~~~~l~~l~~~G~~~i-k~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~ 249 (413)
|.. ....+.++.+.+..+.++ .+.+.+ ......+.+++.++.|+++|+||.+|++....
T Consensus 74 P~~~~~~~~~~~~~l~~~~vvaIGEiGLD~-----~~~~Q~~~f~~ql~lA~e~~lPv~iH~r~~~~------------- 135 (261)
T 3guw_A 74 PRCIPPDYEFVLGYLEEGEWVAFGEIGLEL-----VTDEEIEVLKSQLELAKRMDVPCIIHTPRGNK------------- 135 (261)
T ss_dssp GGGCCTTTHHHHHHHTTSCCSCEEEEECSS-----CCHHHHHHHHHHHHHHHHHTCCEEEECCSSST-------------
T ss_pred cccccccHHHHHHHhCcCCeEEEEEecCCC-----ChHHHHHHHHHHHHHHHHhCCeEEEEcCCCcc-------------
Confidence 321 111223333333455555 233322 11123456889999999999999999975310
Q ss_pred ccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccc
Q 015110 250 TRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCP 321 (413)
Q Consensus 250 ~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p 321 (413)
..+..+++++.++.+. ...+..+.|.+.. .++++-+.|..++..+.|
T Consensus 136 ----------------~~a~~~~~~il~~~~~----~~~~~vi~H~~~~-----~a~~~l~~G~yis~~~~p 182 (261)
T 3guw_A 136 ----------------LKATRKTLEILESLDF----PADLAVIDHVNFE-----TLDMVLETEYWIGLTVQP 182 (261)
T ss_dssp ----------------THHHHHHHHHHHHTTC----CTTSEEEESCCTT-----THHHHHTSSSEEEEECC-
T ss_pred ----------------cchHHHHHHHHHHcCC----CCCCEEEEeCCHH-----HHHHHHhCCEEEEecCCC
Confidence 0133455566655321 1234567788433 234455578777766555
No 79
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=97.55 E-value=0.00012 Score=68.84 Aligned_cols=135 Identities=15% Similarity=0.129 Sum_probs=75.4
Q ss_pred eeeeeecccccCCCCCCC-------c----------cch-HHHHHHHHhCCceEEEeCCCCCCCCCC---cHH-------
Q 015110 97 MPGLIDVHAHLDDPGRTE-------W----------EGF-PSGTKAAAAGGITTLIDMPLNSDPSTI---STE------- 148 (413)
Q Consensus 97 lPGlID~H~H~~~~~~~~-------~----------e~~-~~~~~~al~~GvTTv~d~~~~~~~~~~---~~~------- 148 (413)
|+++||+|+|+..+.... . .+. ....+.+-+.||...+..+. .|... ..+
T Consensus 1 m~~~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~--~p~~~~~~d~~~~~~~~~ 78 (327)
T 2dvt_A 1 MQGKVALEEHFAIPETLQDSAGFVPGDYWKELQHRLLDIQDTRLKLMDAHGIETMILSLN--APAVQAIPDRRKAIEIAR 78 (327)
T ss_dssp CCSEEEEEEEECCHHHHGGGTTTSCSSHHHHHHHHHHCSSSHHHHHHHHTTEEEEEEEEC--SSGGGGCCCHHHHHHHHH
T ss_pred CCCeEEEecccCCHHHHHHHhccCCcccccccchhcCChhHHHHHHhhhcCCcEEEEeCC--CCcccccCChHHHHHHHH
Confidence 678999999986542100 0 022 34456677899998876541 12110 110
Q ss_pred HHHHHH-HHHhcCCeeeEEeeceecCCch-hhHHHHHHHHH-cCCcEEEEeecCCCC--CCCCCCCHHHHHHHHHHHHhc
Q 015110 149 TLKLKV-DAAEKRIYVDVGFWGGLVPENA-YNASALEALLN-AGVLGLKSFMCPSGI--NDFPMTNASHIKEGLSVLARY 223 (413)
Q Consensus 149 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~l~~-~G~~~ik~~~~~~~~--~~~~~~~~~~l~~~~~~A~~~ 223 (413)
...... +....... .+...+++.+... ...++++++++ .|+.++++....... ......+++.+..+++.|+++
T Consensus 79 ~~n~~~~~~~~~~p~-r~~~~~~v~p~~~~~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 157 (327)
T 2dvt_A 79 RANDVLAEECAKRPD-RFLAFAALPLQDPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKL 157 (327)
T ss_dssp HHHHHHHHHHHHCTT-TEEEEECCCTTSHHHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCC-ceEEEeecCcCCHHHHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHc
Confidence 111111 21222111 1222233333333 35678888875 599999876543200 001235667899999999999
Q ss_pred CCCEEEecCCh
Q 015110 224 KRPLLVHAEME 234 (413)
Q Consensus 224 g~~v~~H~e~~ 234 (413)
|++|.+|+.+.
T Consensus 158 ~lpv~iH~~~~ 168 (327)
T 2dvt_A 158 DVPFYLHPRNP 168 (327)
T ss_dssp TCCEEEECCCC
T ss_pred CCeEEECCCCC
Confidence 99999998643
No 80
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=97.54 E-value=0.00025 Score=64.89 Aligned_cols=120 Identities=18% Similarity=0.188 Sum_probs=67.6
Q ss_pred eeeecccccCCCCCCCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCc---
Q 015110 99 GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN--- 175 (413)
Q Consensus 99 GlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 175 (413)
-+||+|+|+....+. .+.......+-+.||++++..+. ..+..+...+.+..... +....++.+..
T Consensus 12 ~~~~~~~hl~~~~~~--~~~~~~l~~~~~~GV~~~v~~~~-------~~~~~~~~~~l~~~~p~--i~~~~G~hP~~~~~ 80 (268)
T 1j6o_A 12 HMVDTHAHLHFHQFD--DDRNAVISSFEENNIEFVVNVGV-------NLEDSKKSLDLSKTSDR--IFCSVGVHPHDAKE 80 (268)
T ss_dssp CEEEEEECTTSGGGT--TTHHHHHHTTTTTTEEEEEEECS-------SHHHHHHHHHHHTTCTT--EEEEECCCGGGGGG
T ss_pred cccccccCCCChhhc--cCHHHHHHHHHHcCCCEEEEeCC-------CHHHHHHHHHHHHHCCC--EEEEEeeccccccc
Confidence 368999999865332 34455566778899999887651 12333333344433222 22222333321
Q ss_pred --hhhHHHHHHHHHc-CC-----cEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 176 --AYNASALEALLNA-GV-----LGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 176 --~~~~~~l~~l~~~-G~-----~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
.+..++++++++. .+ .|++.+... .......+.+...++.|+++|+||.+|+.+
T Consensus 81 ~~~~~~~~l~~~~~~~~~~~iGe~Gld~~~~~----~~~~~q~~~f~~~~~~a~~~~lPv~iH~~~ 142 (268)
T 1j6o_A 81 VPEDFIEHLEKFAKDEKVVAIGETGLDFFRNI----SPAEVQKRVFVEQIELAGKLNLPLVVHIRD 142 (268)
T ss_dssp CCTTHHHHHHHHTTSTTEEEEEEEEEETTTCS----SCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred cCHHHHHHHHHHhccCCEEEEEccccCCcccC----CChHHHHHHHHHHHHHHHHhCCCEEEEeCc
Confidence 1335667766542 12 233322100 001235668899999999999999999853
No 81
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=97.42 E-value=0.00076 Score=60.99 Aligned_cols=118 Identities=19% Similarity=0.068 Sum_probs=64.6
Q ss_pred eeecccccCCCCCCCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCC----c
Q 015110 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE----N 175 (413)
Q Consensus 100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 175 (413)
+||+|+|+... ++.......+.+.||..++. . +. .+......+.+.... ++....|+.|. .
T Consensus 3 liDtH~HL~~~-----~d~~~vl~~a~~~gV~~i~v-~--~~-----~~~~~~~~~la~~~~--~v~~~~GiHP~~~~~~ 67 (254)
T 3gg7_A 3 LIDFHVHLDLY-----PDPVAVARACEERQLTVLSV-T--TT-----PAAWRGTLALAAGRP--HVWTALGFHPEVVSER 67 (254)
T ss_dssp CEEEEECGGGS-----SSHHHHHHHHHHTTCEEEEC-C--SS-----GGGHHHHHGGGTTCT--TEEECBCCCGGGTTTT
T ss_pred eEEEeeCCCCC-----CCHHHHHHHHHHCCCcEEEe-c--CC-----HHHHHHHHHHHHhCC--CeEEEEeeCccccccc
Confidence 89999999853 24555677888999998663 2 11 223333333333222 22222333332 2
Q ss_pred hhhHHHHHHHHHcCCcEEE-EeecCCCCC-CCCCCCHHHHHHHHHHHHhcCCCEE-EecCC
Q 015110 176 AYNASALEALLNAGVLGLK-SFMCPSGIN-DFPMTNASHIKEGLSVLARYKRPLL-VHAEM 233 (413)
Q Consensus 176 ~~~~~~l~~l~~~G~~~ik-~~~~~~~~~-~~~~~~~~~l~~~~~~A~~~g~~v~-~H~e~ 233 (413)
.+.++.+++++.. +.++. +.+.+.... .......+.+++.++.|+++++||. +|+.+
T Consensus 68 ~~~l~~l~~~~~~-~vaIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r~ 127 (254)
T 3gg7_A 68 AADLPWFDRYLPE-TRFVGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRR 127 (254)
T ss_dssp GGGTHHHHHHGGG-CSEEEEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHhhh-ccEEEEEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 2345667766643 33332 222211000 0001134468899999999999998 99975
No 82
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=97.41 E-value=0.0039 Score=56.72 Aligned_cols=128 Identities=14% Similarity=0.131 Sum_probs=77.3
Q ss_pred hhHHHHHHHH-HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc-CCCEEEecCChhhchhhHhhccCcCCccccc
Q 015110 177 YNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRPLLVHAEMEKGSERHVKLEDDTLDTRSYS 254 (413)
Q Consensus 177 ~~~~~l~~l~-~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~ 254 (413)
+..+++++++ +.|+.+++.+... . . ..+.+..+++.|+++ |++|.+|+.....
T Consensus 102 ~~~~el~~~~~~~g~~gi~~~g~~----~--~-~~~~~~~~~~~a~~~~~lpv~iH~~~~~~------------------ 156 (272)
T 3cjp_A 102 DTNSYIEENIVNNKLVGIGELTPA----S--G-QIKSLKPIFKYSMDSGSLPIWIHAFNPLV------------------ 156 (272)
T ss_dssp HHHHHHHHHTTTTTCSEEEEECCC----T--T-CGGGGHHHHHHHHHTTCCCEEECCSTTCC------------------
T ss_pred HHHHHHHHHHHhcCceEEEecCCC----C--C-ccHHHHHHHHHHHhccCCcEEEeCCCCCc------------------
Confidence 3456777765 4689999864211 1 2 556899999999999 9999999864210
Q ss_pred cCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCCC
Q 015110 255 TYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG 334 (413)
Q Consensus 255 ~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~ 334 (413)
..+...+..+++++ ++.++.++|.... ...+.++.+++. -+++++++..+
T Consensus 157 -----------~~~~~~~~~~l~~~------p~l~iv~~H~G~~-~~~~~~~~~~~~-~~~y~~~s~~~----------- 206 (272)
T 3cjp_A 157 -----------LQDIKEIAELCKAF------PKVPVILGHMGGS-NWMTAVELAKEI-QNLYLDTSAYF----------- 206 (272)
T ss_dssp -----------HHHHHHHHHHHHHS------TTSCEEEGGGGGG-GHHHHHHHHHHC-TTEEEECTTCS-----------
T ss_pred -----------cccHHHHHHHHHHC------CCceEEEECCCCc-cHHHHHHHHHhC-CCEEEEecccc-----------
Confidence 01233445556553 4788889998765 434455545432 24555554310
Q ss_pred CcceEEcCCCCChhcHHHHHHHHhcCCccEEcCCCCCCC
Q 015110 335 DTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTV 373 (413)
Q Consensus 335 ~~~~k~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p~~ 373 (413)
+....+.+.+.+ +.-..++||. |+.
T Consensus 207 -----------~~~~~~~~~~~~--~dril~gSD~-P~~ 231 (272)
T 3cjp_A 207 -----------STFVLKIVINEL--PLKCIFGTDM-PFG 231 (272)
T ss_dssp -----------CHHHHHHHHHHS--TTTEECCCCT-TSS
T ss_pred -----------cHHHHHHHHHhC--CCeEEEeCCC-CCC
Confidence 012334455554 4556899998 664
No 83
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=97.40 E-value=0.0033 Score=58.48 Aligned_cols=175 Identities=15% Similarity=0.095 Sum_probs=101.1
Q ss_pred EeeeeeecccccCCCC--CC--------C-ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeee
Q 015110 96 IMPGLIDVHAHLDDPG--RT--------E-WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 164 (413)
Q Consensus 96 vlPGlID~H~H~~~~~--~~--------~-~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (413)
+=||.||+|.|+..+. +. . .-........+-+.||+..+...... ....+...++ .++.... ....
T Consensus 23 ~p~~~iDaH~H~~~~~~~~p~~~~~~~~~~~~~~e~l~~~m~~~GI~~~Vlvq~~~-~~~dN~~ll~-~l~~~~~-r~~G 99 (303)
T 4d9a_A 23 PPPGAIDAHCHVFGPMAQFPFSPKAKYLPRDAGPDMLFALRDHLGFARNVIVQASC-HGTDNAATLD-AIARAQG-KARG 99 (303)
T ss_dssp CCTTCEEEEECCBCCTTTSCCCTTCSCCBCCBCHHHHHHHHHHHTCSEEEEECCGG-GTTCCHHHHH-HHHHTTT-SEEE
T ss_pred CCCCceEeeeEeecCcccCCCCCCCCCcCCCCCHHHHHHHHHHcCCCeEEEecccc-ccccHHHHHH-HHHhCCC-cEEE
Confidence 4468999999998631 11 0 11223344555678998887654111 1122322222 2222221 1222
Q ss_pred EEeeceecCCchhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhc
Q 015110 165 VGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLE 244 (413)
Q Consensus 165 ~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~ 244 (413)
+. .+.+.. ..++++++.+.|+.|++....... ....+.+.+..+++.+++ |+++.+|+....
T Consensus 100 va---~vdp~~--~~~eL~~l~~~G~rGvR~~~~~~~---~~~~~~~~~~~~~~~l~~-gl~v~l~~~~~~--------- 161 (303)
T 4d9a_A 100 IA---VVDPAI--DEAELAALHEGGMRGIRFNFLKRL---VDDAPKDKFLEVAGRLPA-GWHVVIYFEADI--------- 161 (303)
T ss_dssp EE---CCCTTC--CHHHHHHHHHTTEEEEEEECCTTT---CSCCCHHHHHHHHTSCCT-TCEEEEECCGGG---------
T ss_pred EE---EeCCCC--CHHHHHHHHHCCCCEEEeecccCC---ccccCHHHHHHHHHHHhc-CCEEEEeccccc---------
Confidence 22 122221 246788888889999998654321 135688899999999999 999999985322
Q ss_pred cCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChh-------hH-HHHHHHHHHCCCCEE
Q 015110 245 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS-------SS-LDLLMEAKTNGDSIT 316 (413)
Q Consensus 245 ~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~-------~~-~~~i~~ak~~G~~v~ 316 (413)
+..+.+++++ + ++++.+.|+..++ .. -++++.+++.+ +|+
T Consensus 162 ------------------------l~~l~~~~~~------~-~~~iVidH~G~p~~~~g~~~~~~~~~~~l~~~~~-NV~ 209 (303)
T 4d9a_A 162 ------------------------LEELRPFMDA------I-PVPIVIDHMGRPDVRQGPDGADMKAFRRLLDSRE-DIW 209 (303)
T ss_dssp ------------------------HHHHHHHHHH------C-SSCEEEGGGGCCCGGGCTTSHHHHHHHHHHHHCT-TEE
T ss_pred ------------------------HHHHHHHHHH------C-CCcEEEeCCCCCCcccCCCCHHHHHHHHHHhhCC-CEE
Confidence 2234455655 3 7899999998520 12 23455555433 688
Q ss_pred EEccccc
Q 015110 317 VETCPHY 323 (413)
Q Consensus 317 ~e~~p~~ 323 (413)
++++--+
T Consensus 210 vKlSg~~ 216 (303)
T 4d9a_A 210 FKATCPD 216 (303)
T ss_dssp EECCCHH
T ss_pred EEeeCce
Confidence 8887643
No 84
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=97.32 E-value=0.00072 Score=62.22 Aligned_cols=124 Identities=15% Similarity=0.066 Sum_probs=72.3
Q ss_pred eeeecccccCCCCC----------CCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEee
Q 015110 99 GLIDVHAHLDDPGR----------TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 168 (413)
Q Consensus 99 GlID~H~H~~~~~~----------~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (413)
++||+|+|+..+.. ....+.....+.+-+.||+..+..+.... ...+.. +.+..+....+ . ...
T Consensus 13 ~iID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~-~~~n~~-~~~~~~~~p~r-~---~~~ 86 (288)
T 2ffi_A 13 TAIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFL-GTDNRY-LLSALQTVPGQ-L---RGV 86 (288)
T ss_dssp CCEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGG-TTCCHH-HHHHHHHSTTT-B---CCB
T ss_pred CceeecccccCCCCCCCCcccCCCCCCCCHHHHHHHHHHhCCCeEEEECCccc-cccHHH-HHHHHHHCCCC-E---EEE
Confidence 68999999975321 00123444556677899998775541111 122222 22222222111 1 111
Q ss_pred ceecCCchhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 169 GGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 169 ~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
.++.+.. ..++++++.+.|+.++++.....+ ....+.+.+..+++.|+++|++|.+|+..
T Consensus 87 ~~v~p~~--~~~el~~~~~~g~~Gi~~~~~~~~---~~~~~~~~~~~~~~~a~~~~lpv~iH~~~ 146 (288)
T 2ffi_A 87 VMLERDV--EQATLAEMARLGVRGVRLNLMGQD---MPDLTGAQWRPLLERIGEQGWHVELHRQV 146 (288)
T ss_dssp BCCCSSC--CHHHHHHHHTTTCCEEECCCSSSC---CCCTTSTTTHHHHHHHHHHTCEEEECSCT
T ss_pred EEeCCCC--CHHHHHHHHHCCCeEEEEecccCC---CCCcccHHHHHHHHHHHHCCCeEEEeech
Confidence 2232322 246788888889999987654321 12345578999999999999999999864
No 85
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=97.29 E-value=0.0019 Score=58.50 Aligned_cols=123 Identities=17% Similarity=0.239 Sum_probs=65.6
Q ss_pred eeecccccCCCCCCCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCc----
Q 015110 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN---- 175 (413)
Q Consensus 100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 175 (413)
+||+|+|+....+ ..+.....+.+-+.||+.++..+.. ....+...+....... +....++.+..
T Consensus 2 ~iD~H~Hl~~~~~--~~~~~~~l~~~~~~Gv~~~v~~~~~-------~~~~~~~~~~~~~~p~--~~~~~g~~P~~~~~~ 70 (265)
T 2gzx_A 2 LIDTHVHLNDEQY--DDDLSEVITRAREAGVDRMFVVGFN-------KSTIERAMKLIDEYDF--LYGIIGWHPVDAIDF 70 (265)
T ss_dssp CEEEEECTTSGGG--TTTHHHHHHHHHHTTCCEEEEEECS-------HHHHHHHHHHHHHCTT--EEEEECCCGGGGGGC
T ss_pred eEEEeeCCCCccc--ccCHHHHHHHHHHcCCCEEEEeCCC-------HHHHHHHHHHHHhCCC--EEEEEEeccCccccC
Confidence 7999999976432 1234555677788999998876521 1222222233322221 21222233321
Q ss_pred -hhhHHHHHHHHHc-CCcEEEEe-ecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 176 -AYNASALEALLNA-GVLGLKSF-MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 176 -~~~~~~l~~l~~~-G~~~ik~~-~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
.+..++++++++. ++.++... +.............+.+...++.|+++|+++.+|+..
T Consensus 71 ~~~~~~~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~ 131 (265)
T 2gzx_A 71 TEEHLEWIESLAQHPKVIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRLKLPIIIHNRE 131 (265)
T ss_dssp CHHHHHHHHHHTTSTTEEEEEEEEEECSCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred CHHHHHHHHHHhcCCCEEEEEeccCCCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 1235666666543 33333211 1110000001235567999999999999999999853
No 86
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=97.26 E-value=0.0032 Score=58.50 Aligned_cols=152 Identities=11% Similarity=0.039 Sum_probs=86.1
Q ss_pred eeecccccCCCC---CC----C------ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEE
Q 015110 100 LIDVHAHLDDPG---RT----E------WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVG 166 (413)
Q Consensus 100 lID~H~H~~~~~---~~----~------~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (413)
.||+|+|+..+. .. . .-........+-..||+.++..... . .....+...+.++....+ ++
T Consensus 5 ~iD~H~H~~~~~~~~~pw~~~~~~~~~~~~~~~~ll~~~~~~GV~~~V~v~~~--~---~~~~n~~l~~la~~~p~~-~g 78 (303)
T 4do7_A 5 RIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQAR--A---GRDETAFLLELACDEARI-AA 78 (303)
T ss_dssp CEEEEECCBCCCGGGCTTCCTTCGGGSSCBCHHHHHHHHHHTTCCEEEEECCS--S---SHHHHHHHHHHHTTCTTE-EE
T ss_pred EEeCCEecccCCCCCCCCCCCccccccCCCCHHHHHHHHHhcCCcEEEEEccC--C---cHHHHHHHHHHHHhCCCe-EE
Confidence 499999997642 10 0 0123344556678999988766421 1 112222223333322211 12
Q ss_pred eeceecCCchhhHHHHHHHHHcCCcEEEEeecCCCCCCCC-CCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhcc
Q 015110 167 FWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFP-MTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLED 245 (413)
Q Consensus 167 ~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~-~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~ 245 (413)
+.+.+.+...+..++++++.+.|+.+++....... ... ..+.+.+...++.++++|+++.+|+....
T Consensus 79 ~vg~v~~~~~~~~~~L~~l~~~gv~Gir~~~~~~~--~~~~~~~~~~~~~~~~~~~~~glpv~ih~~~~~---------- 146 (303)
T 4do7_A 79 VVGWEDLRAPQLAERVAEWRGTKLRGFRHQLQDEA--DVRAFVDDADFARGVAWLQANDYVYDVLVFERQ---------- 146 (303)
T ss_dssp EEECCCTTCTTHHHHHTTCCSSCEEEEECCGGGSS--CHHHHHHCHHHHHHHHHHHHTTCEEEECCCGGG----------
T ss_pred EEEEeCCCCchHHHHHHHHhhcCceEEEecCcCCC--CccccccCHHHHHHHHHHHHCCCeEEEecCHHH----------
Confidence 21112222223456676666678889886533210 000 23456789999999999999999985421
Q ss_pred CcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCCh
Q 015110 246 DTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA 298 (413)
Q Consensus 246 ~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~ 298 (413)
+..+..++++. +++++.+.|+..+
T Consensus 147 -----------------------l~~l~~ll~~~------P~l~iVi~H~G~p 170 (303)
T 4do7_A 147 -----------------------LPDVQAFCARH------DAHWLVLDHAGKP 170 (303)
T ss_dssp -----------------------HHHHHHHHHHC------CSSCEEEGGGGCC
T ss_pred -----------------------HHHHHHHHHHC------CCCCEEEeCCCCC
Confidence 22345566653 5899999999764
No 87
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=97.20 E-value=0.019 Score=54.44 Aligned_cols=109 Identities=17% Similarity=0.175 Sum_probs=63.6
Q ss_pred CHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCc
Q 015110 209 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA 288 (413)
Q Consensus 209 ~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~ 288 (413)
....+++.++.+++.|+|+.+|++..... .+.++ +.++.+ ...-
T Consensus 191 E~k~frA~a~aa~etG~Pv~iHt~~~~~~----------------------------~e~l~----iL~eeG----~~~~ 234 (360)
T 3tn4_A 191 EKMFFRAAARAQKETGAVIITHTQEGTMG----------------------------PEQAA----YLLEHG----ADPK 234 (360)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECSTTCCH----------------------------HHHHH----HHHHTT----CCGG
T ss_pred HHHHHHHHHHHHHHhCCcEEEEcCcccCC----------------------------HHHHH----HHHHcC----CCCC
Confidence 34578999999999999999998653210 01121 112211 0124
Q ss_pred eEEEEccCChhhHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCcc--EEc
Q 015110 289 HLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--MLS 366 (413)
Q Consensus 289 ~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~--~i~ 366 (413)
++.+.|+... ...+.++++-+.|..+..+..-. .... -.|+ +.+..+.|.+.++.|-.| .++
T Consensus 235 ~vvi~H~~~~-~d~~~~~~~l~~G~yl~fD~iG~------------~~~~-~~p~--d~~r~~~l~~lv~~g~~drILLs 298 (360)
T 3tn4_A 235 KIVIGHMCDN-TDPDYHRKTLAYGVYIAFDRFGI------------QGMV-GAPT--DEERVRTLLALLRDGYEKQIMLS 298 (360)
T ss_dssp GEEECCGGGC-CCHHHHHHHHTTTCEEEECCTTC------------CCST-TCCC--HHHHHHHHHHHHHTTCGGGEEEC
T ss_pred ceEEEcCCCC-CCHHHHHHHHHcCCEEEEccccc------------cccc-CCCC--hHHHHHHHHHHHHhcCcceEEEe
Confidence 6889996322 34667777777887776653211 0000 0121 334456677788888766 788
Q ss_pred CCC
Q 015110 367 SDH 369 (413)
Q Consensus 367 sDh 369 (413)
+|-
T Consensus 299 tDa 301 (360)
T 3tn4_A 299 HDT 301 (360)
T ss_dssp CCC
T ss_pred cCC
Confidence 885
No 88
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=97.12 E-value=0.012 Score=55.23 Aligned_cols=210 Identities=16% Similarity=0.137 Sum_probs=108.0
Q ss_pred eeeecccccCCCCC------------CCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEE
Q 015110 99 GLIDVHAHLDDPGR------------TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVG 166 (413)
Q Consensus 99 GlID~H~H~~~~~~------------~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (413)
|+..+|=|+..... .+.+......+.+.+.|++|++|+. + .....+...+....+...-+..+..+
T Consensus 17 G~t~~HEHl~~~~~~~~~~~~~~~~l~~~~~~~~el~~~~~~G~~tiVd~t-~-~~~gR~~~~l~~is~~tgv~iv~~TG 94 (330)
T 3pnz_A 17 GFTYSHEHIVCVPAYWQERDADDLLLDDKEKSQLDVQDFADLGGKTIVDAT-A-VDYGRRVLDVAQISKETGIQIVGTAG 94 (330)
T ss_dssp CSEEEEECCSBCCHHHHTTTCGGGCBCCHHHHHHHHHHHHHTTCCEEEECC-C-GGGCBCHHHHHHHHHHHCCEEEEEEE
T ss_pred CCceeccCceecChhhhhcCCCcccccCHHHHHHHHHHHHHhCCCEEEECC-C-CccccCHHHHHHHHHHhCCEEEEeCC
Confidence 88889999864210 0112223345667789999999986 2 12234555655544432222223334
Q ss_pred eecee-c-----C------C----chh-----hHHHHHHH----HHcCC-----cE--EEEeecCCCCCCCCCCCHHHHH
Q 015110 167 FWGGL-V-----P------E----NAY-----NASALEAL----LNAGV-----LG--LKSFMCPSGINDFPMTNASHIK 214 (413)
Q Consensus 167 ~~~~~-~-----~------~----~~~-----~~~~l~~l----~~~G~-----~~--ik~~~~~~~~~~~~~~~~~~l~ 214 (413)
++... . + . .+. ..+++.++ +..|+ .. +++.+++.. ......+.++
T Consensus 95 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~ei~~Gi~~t~vkaGvIEiGld~~~---~~~~q~~~f~ 171 (330)
T 3pnz_A 95 FNKSFLWDGKIKPELKPIIGDFETYYEWIENTTTDKLTEFVVNEVENGLEGTPYKAGQVKFGTGYNM---ITPLEEKTIR 171 (330)
T ss_dssp CCCGGGGGSBCCGGGHHHHCSCSBHHHHHHTSCHHHHHHHHHHHHHTCSTTSSCCEEEEEEECBTTB---CCHHHHHHHH
T ss_pred CCccccccccccccccccccccccCchhhccCCHHHHHHHHHHHHHhhCCCcCcCcCeEEEEcCCCC---CCHHHHHHHH
Confidence 43210 0 0 0 001 12233222 23443 22 465544321 1112345788
Q ss_pred HHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEc
Q 015110 215 EGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVH 294 (413)
Q Consensus 215 ~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H 294 (413)
+.++.|+++|+||.+|+++... +.+ .+++.++.+. ...++.+.|
T Consensus 172 aq~~~A~~~glPViiH~r~g~~-------------------------------a~~-~l~iL~e~~~----~~~~vvi~H 215 (330)
T 3pnz_A 172 AVARAHHETKAPIHSHTEAGTM-------------------------------ALE-QIEILKQENI----PLEYLSIGH 215 (330)
T ss_dssp HHHHHHHHHCCCEEEECGGGCC-------------------------------HHH-HHHHHHHTTC----CGGGEEETT
T ss_pred HHHHHHHHHCCeEEEeCCCCcC-------------------------------hHH-HHHHHHHcCC----CCCeEEEec
Confidence 8999999999999999864211 111 1333333211 124577889
Q ss_pred cC-ChhhHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCcc--EEcCCC
Q 015110 295 LS-DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--MLSSDH 369 (413)
Q Consensus 295 ~s-~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~--~i~sDh 369 (413)
+. +. +++..+++-+.|..+..+.... ++ .+| .....+.+.+.++.|..| .+.||.
T Consensus 216 ~~~s~--~~e~a~~~l~~G~~i~~~g~~t---------------~~-~~~--~~~~~~~l~~lv~~g~~drilleTD~ 273 (330)
T 3pnz_A 216 MDRNL--DPYYHKQVAKTGAFMSFDGIAK---------------IK-YAP--ESARIAAILYLVSEGFEDQILVSGDT 273 (330)
T ss_dssp GGGSC--CHHHHHHHHTTTCEEEECCTTC---------------TT-TCC--HHHHHHHHHHHHHTTCGGGEEECCCC
T ss_pred CCCCC--CHHHHHHHHHcCcEEEEccCcc---------------cC-CCC--hHHHHHHHHHHHHcCCCCeEEEeCCC
Confidence 85 43 3666666667787666543210 00 011 122345677777778665 788987
No 89
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=96.90 E-value=0.0021 Score=59.53 Aligned_cols=130 Identities=12% Similarity=0.049 Sum_probs=72.5
Q ss_pred eeeecccccCCCCCC----------------CccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHH-------HHHHHH-
Q 015110 99 GLIDVHAHLDDPGRT----------------EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTE-------TLKLKV- 154 (413)
Q Consensus 99 GlID~H~H~~~~~~~----------------~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~-------~~~~~~- 154 (413)
.+||+|+|+..+... ...+.....+.+-+.||+..+..+..........+ ......
T Consensus 2 ~~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 81 (307)
T 2f6k_A 2 SKIDFHTHYLPTSYVEALKRHVPGDPDGWPTPEWTPQLTLNFMRDNDISYSILSLSSPHVNFGDKAETIRLVEAANDDGK 81 (307)
T ss_dssp CEEEEEEECCCHHHHHHHHHHCCSSGGGSCCCCCCHHHHHHHHHHTTEEEEEEECCSSCSCSSCHHHHHHHHHHHHHHHH
T ss_pred CeEEEecCcCCHHHHHHHHHhccCCcccCcCCCCCHHHHHHHHHHcCCCEEEEeCCCcccccCCHHHHHHHHHHHHHHHH
Confidence 379999998653210 01234455667788999997765411000010110 111111
Q ss_pred HHHhcCCeeeEEeeceecC-Cc-hhhHHHHHHHHH-cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015110 155 DAAEKRIYVDVGFWGGLVP-EN-AYNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (413)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~-~~-~~~~~~l~~l~~-~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 231 (413)
+....... .+...+ ..+ .. ....++++++++ .|+.++++...+.+ ...+++.+..+++.|+++|++|.+|+
T Consensus 82 ~~~~~~p~-r~~~~~-~~p~~~~~~~~~el~~~~~~~g~~gi~~~~~~~~----~~~~~~~~~~~~~~a~~~~lpv~iH~ 155 (307)
T 2f6k_A 82 SLAQQYPD-QLGYLA-SLPIPYELDAVKTVQQALDQDGALGVTVPTNSRG----LYFGSPVLERVYQELDARQAIVALHP 155 (307)
T ss_dssp HHHHHCTT-TEEEEE-CCCTTCHHHHHHHHHHHHHTSCCSEEEEESEETT----EETTCGGGHHHHHHHHTTTCEEEEEC
T ss_pred HHHHhCcc-ceeEEE-eCCCCCHHHHHHHHHHHHhccCCcEEEEeccCCC----CCCCcHhHHHHHHHHHHcCCeEEECC
Confidence 22222111 122222 222 22 345678888875 69999987654321 12345689999999999999999998
Q ss_pred CCh
Q 015110 232 EME 234 (413)
Q Consensus 232 e~~ 234 (413)
...
T Consensus 156 ~~~ 158 (307)
T 2f6k_A 156 NEP 158 (307)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 90
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=96.75 E-value=0.043 Score=52.08 Aligned_cols=212 Identities=15% Similarity=0.136 Sum_probs=108.0
Q ss_pred eeeecccccCCCCC-----------CCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhc-C--Ceee
Q 015110 99 GLIDVHAHLDDPGR-----------TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-R--IYVD 164 (413)
Q Consensus 99 GlID~H~H~~~~~~-----------~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~ 164 (413)
|+..+|=|+..... .+.+......+.+.+.|++|++++. . .....+...+....+...+ . ..+.
T Consensus 21 G~tl~HEHl~~~~~~~~~~~~~~~l~d~~~~~~el~~~~~~G~~tiVd~t-~-~~~GRd~~~l~~is~~t~~~Gv~Iv~~ 98 (363)
T 3ovg_A 21 GITDCHDHFIKNGGPEVEEHIDFLMLNVDASIKEFKEFIDRGGSTIVTMD-P-PNVGRDVLKTLEIANAVKNLGGNVIMS 98 (363)
T ss_dssp CEEEEEECSCBCSSHHHHHCGGGCBCCHHHHHHHHHHHHHTTEEEEEECC-C-TTTTCCHHHHHHHHHHHGGGTCEEEEE
T ss_pred CCceeccceeccCChhhccCCcccccCHHHHHHHHHHHHHhCCCeEEEeC-C-CccCCCHHHHHHHHHhcccCCcEEEEe
Confidence 88999999854211 1112223345556789999999985 2 2234456666665554321 1 2223
Q ss_pred EEeecee-cCCchh-----hHHHHHHH----HHcCCc-----------------EEEEeecCCCCCCCCCCCHHHHHHHH
Q 015110 165 VGFWGGL-VPENAY-----NASALEAL----LNAGVL-----------------GLKSFMCPSGINDFPMTNASHIKEGL 217 (413)
Q Consensus 165 ~~~~~~~-~~~~~~-----~~~~l~~l----~~~G~~-----------------~ik~~~~~~~~~~~~~~~~~~l~~~~ 217 (413)
.+++... .+..+. ..+++.++ +..|+. .+|+..++.. ......+.+++.+
T Consensus 99 TG~y~~~~~~~~~~~~~~~~~e~l~~~~~~ei~~Gi~~~~~~gp~~~~t~ikaG~ikig~s~~~---~t~~Q~~~f~aq~ 175 (363)
T 3ovg_A 99 TGFHKAKFYDKYSSWLAVVPTEEIVKMCVAEIEEGMDEYNYNGPVVKRSKAKAGIIKAGTGYGA---IDRLELKALEVAA 175 (363)
T ss_dssp EECCCGGGSCTTTSHHHHSCHHHHHHHHHHHHHTCCBTTTTSSSCCCBCSCCCCEEEEEEEETB---EEHHHHHHHHHHH
T ss_pred CCCCcCcccccCcHhhhcCCHHHHHHHHHHHHHhcccccccccccccCCCccCCEEEEEeCCCC---CCHHHHHHHHHHH
Confidence 3333211 110001 12233222 234432 2344333211 0112345788899
Q ss_pred HHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCC
Q 015110 218 SVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD 297 (413)
Q Consensus 218 ~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~ 297 (413)
+.|+++|+||.+|++.... +. +.+++.++.+. ...++.++|+.+
T Consensus 176 ~~A~e~glPViiH~r~gr~-------------------------------a~-d~l~iL~e~g~----~~~~vvi~H~~~ 219 (363)
T 3ovg_A 176 RTSILTGCPILVHTQLGTM-------------------------------AL-EVAKHLIGFGA----NPDKIQISHLNK 219 (363)
T ss_dssp HHHHHHCCCEEEEEETTCS-------------------------------HH-HHHHHHHHHTC----CGGGEEEECGGG
T ss_pred HHHHHhCCEEEEeCCCCCC-------------------------------HH-HHHHHHHhcCC----CCCcEEEEcCCC
Confidence 9999999999999854211 11 23344443311 124578999874
Q ss_pred hhhHHHHHHHHH-HCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCcc--EEcCCCC
Q 015110 298 ASSSLDLLMEAK-TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--MLSSDHS 370 (413)
Q Consensus 298 ~~~~~~~i~~ak-~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~--~i~sDh~ 370 (413)
. .+++..+++- +.|..+..+.... + . + .| +....+.|.+.++.|-.| .+.||..
T Consensus 220 ~-~~~~~a~~~l~~~G~yI~f~g~~~---~--------~-~---~~---~~~ra~~l~~lv~~~p~drILleTDap 276 (363)
T 3ovg_A 220 N-PDKYYYEKVIKETGVTLCFDGPDR---V--------K-Y---YP---DSLLAENIKYLVDKGLQKHITLSLDAG 276 (363)
T ss_dssp S-CCHHHHHHHHHHHCCEEEECCTTC---T--------T-T---CC---HHHHHHHHHHHHHTTCGGGEEECCCCC
T ss_pred C-CCHHHHHHHHHHCCcEEEECCeec---c--------c-c---CC---hhHHHHHHHHHHHhcCCCeEEEeCCCC
Confidence 3 3344444444 5676666552210 0 0 0 01 122445677888888776 7899973
No 91
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=96.73 E-value=0.016 Score=55.21 Aligned_cols=112 Identities=13% Similarity=0.167 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHhc-CCCEEEec-CChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhc-ccCCCCC
Q 015110 210 ASHIKEGLSVLARY-KRPLLVHA-EMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDT-RTDGPAE 286 (413)
Q Consensus 210 ~~~l~~~~~~A~~~-g~~v~~H~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~-~~~~~~~ 286 (413)
.+.+++.++.|+++ |+||.+|+ .+.+. -.+.+++.++. +. .
T Consensus 178 ~~~f~aq~~~A~~~~glPV~iH~~r~~~a--------------------------------~~e~l~iL~e~~~~----~ 221 (365)
T 3rhg_A 178 KNSLRAAALAQNNNPYASMNIHMPGWQRR--------------------------------GDEVLDILLTEMGC----D 221 (365)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEECCTTSCC--------------------------------HHHHHHHHTTTTCC----C
T ss_pred HHHHHHHHHHHHHhcCCcEEEECCCCCcC--------------------------------HHHHHHHHHhccCC----C
Confidence 45688889999999 99999997 53211 12223333331 11 1
Q ss_pred CceEEEEccC-ChhhHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCcc--
Q 015110 287 GAHLHIVHLS-DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID-- 363 (413)
Q Consensus 287 g~~vhi~H~s-~~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~-- 363 (413)
..++.+.|+. +. .+++..+++-+.|..+..+..-.... ++..+ . .| .+.+..+.|.+.++.|..|
T Consensus 222 ~~~vvi~H~~rs~-~~~e~a~~~l~~G~~I~~~g~g~~~t-----f~~~~--~--~~--~d~~~a~~l~~li~~g~~dri 289 (365)
T 3rhg_A 222 PAKISLAHSDPSG-KDIDYQCKMLDRGVWLEFDMIGLDIS-----FPKEG--A--AP--SVMDTVEAVATLIERGYGNQI 289 (365)
T ss_dssp GGGEEESCCGGGT-TCHHHHHHHHHTTCEEEECCTTCCCB-----CSSSC--B--CC--CHHHHHHHHHHHHHTTCGGGE
T ss_pred CCceEEecCCCCC-CCHHHHHHHHhCCCEEEecCCCcccc-----ccccc--c--cc--chHHHHHHHHHHHHhCCCCcE
Confidence 2347788987 53 35677777777887766553210000 11101 0 11 1223456788888888766
Q ss_pred EEcCCC
Q 015110 364 MLSSDH 369 (413)
Q Consensus 364 ~i~sDh 369 (413)
.+.||.
T Consensus 290 lleTD~ 295 (365)
T 3rhg_A 290 VLSHDV 295 (365)
T ss_dssp EECCCC
T ss_pred EEeCCC
Confidence 688887
No 92
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=96.42 E-value=0.022 Score=53.50 Aligned_cols=53 Identities=19% Similarity=0.141 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 177 YNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 177 ~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
...++++++++.|+.++++.....+ ...+++.+..+++.+.++|++|.+|+..
T Consensus 128 ~a~~el~~~~~~g~~Gv~l~~~~~~----~~l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 128 LACKEASRAVAAGHLGIQIGNHLGD----KDLDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp HHHHHHHHHHHHTCCCEEEESCBTT----BCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred HHHHHHHHHHHcCCeEEEECCCCCC----CCCCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 4567888888789999987654322 2356788999999999999999999865
No 93
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=96.23 E-value=0.023 Score=54.44 Aligned_cols=40 Identities=15% Similarity=0.067 Sum_probs=30.9
Q ss_pred eeeeecccccCCCCCC--------CccchHHHHHHHHhCCceEEEeCC
Q 015110 98 PGLIDVHAHLDDPGRT--------EWEGFPSGTKAAAAGGITTLIDMP 137 (413)
Q Consensus 98 PGlID~H~H~~~~~~~--------~~e~~~~~~~~al~~GvTTv~d~~ 137 (413)
+-|||+|+|+..+.+. ..+++......|...||+.++..+
T Consensus 12 ~~~iDih~nL~d~~f~g~y~~~~~h~~D~~~vl~rA~~~GV~~ii~~g 59 (401)
T 3e2v_A 12 LKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTG 59 (401)
T ss_dssp CCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECC
T ss_pred CCeEEEEeCcCcHHHhhhccccccCccCHHHHHHHHHHCCCCEEEEec
Confidence 5699999999876432 135667778889999999998665
No 94
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=96.11 E-value=0.036 Score=52.21 Aligned_cols=213 Identities=18% Similarity=0.202 Sum_probs=107.4
Q ss_pred eeeecccccCC--CCCC------Cc---cc---hHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeee
Q 015110 99 GLIDVHAHLDD--PGRT------EW---EG---FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 164 (413)
Q Consensus 99 GlID~H~H~~~--~~~~------~~---e~---~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (413)
|+..+|=|+.. ++.. .+ ++ .....+.+.+.||+|+++.. .. ....+.+.+....+......++.
T Consensus 32 G~t~~HEHl~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~a~~aGv~tiV~~~-~~-~~~r~~~~l~~la~~~g~~i~~~ 109 (339)
T 3gtx_A 32 GATLPHEHVIFGYPGYAGDVTLGPFDHAAALASCTETARALLARGIQTVVDAT-PN-GCGRNPAFLREVSEATGLQILCA 109 (339)
T ss_dssp CEEEEEEEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTEEEEEECC-CT-TTTCCHHHHHHHHHHHCCEEECE
T ss_pred CCeeeccCeeccCcccccCCCccccchHHHHHHHHHHHHHHHHhCCCeEEecC-CC-ccCcCHHHHHHHHHHcCCcEEEE
Confidence 89999999843 2211 11 11 22345667899999999875 21 11234555544433221112222
Q ss_pred EEeecee-----cCCc----hhhHHHHHHHHH----cC-------CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 015110 165 VGFWGGL-----VPEN----AYNASALEALLN----AG-------VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK 224 (413)
Q Consensus 165 ~~~~~~~-----~~~~----~~~~~~l~~l~~----~G-------~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g 224 (413)
.+++..- .+.. ....+++.+++. .| +..+++.+++.. ......+.+++.++.|+++|
T Consensus 110 tG~hp~~~~~~~~~~~~~~~~~~~~~L~~~~~~e~~~gIg~tg~k~g~IEigld~~~---~~~~q~~~f~aq~~lA~~~g 186 (339)
T 3gtx_A 110 TGFYYEGGGATTYFKFRASLGDAESEIYEMMRTEVTEGIAGTGIRAGVIKLASSRDA---ITPYEQLFFRAAARVQRETG 186 (339)
T ss_dssp ECCCCTTTSSCHHHHHHHHHSCHHHHHHHHHHHHHHTCSTTSSCCCSEEEEECCSSC---CCHHHHHHHHHHHHHHHHHC
T ss_pred cCCCccCccCCcCCcccccccCCHHHHHHHHHHHHHhcccccCcccceEEEEcCCCC---CCHHHHHHHHHHHHHHHHHC
Confidence 3332200 0000 012344544432 12 123366554321 11123447888899999999
Q ss_pred CCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccC-ChhhHHH
Q 015110 225 RPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS-DASSSLD 303 (413)
Q Consensus 225 ~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s-~~~~~~~ 303 (413)
+||.+|+..... +.+ .+++.++.+. ...++.+.|+. +. +++
T Consensus 187 lPViiH~~~gr~-------------------------------a~~-~~~iL~~~~~----~~~~~vi~H~~~~~--~~e 228 (339)
T 3gtx_A 187 VPIITHTQEGQQ-------------------------------GPQ-QAELLTSLGA----DPARIMIGHMDGNT--DPA 228 (339)
T ss_dssp CCEEEECSTTCC-------------------------------HHH-HHHHHHHTTC----CGGGEEECCGGGCC--CHH
T ss_pred CeEEEeCCCCcC-------------------------------HHH-HHHHHHHcCC----CcccEEEEccCCCC--CHH
Confidence 999999943110 111 2344444311 12356788996 43 366
Q ss_pred HHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCcc--EEcCCC
Q 015110 304 LLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--MLSSDH 369 (413)
Q Consensus 304 ~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~--~i~sDh 369 (413)
..+++-+.|..+..+..-. ..+. + .| .+....+.|.+.++.|-.| .+.||.
T Consensus 229 ~a~~~l~~G~~i~~~g~~t------~~~~--~-----~p--~~~~~~~~l~~li~~~~~drilleTD~ 281 (339)
T 3gtx_A 229 YHRETLRHGVSIAFDRIGL------QGMV--G-----TP--TDAERLSVLTTLLGEGYADRLLLSHDS 281 (339)
T ss_dssp HHHHHHTTTCEEEECCTTC------CSST--T-----CC--CHHHHHHHHHHHHHTTCGGGEEECCCC
T ss_pred HHHHHHHcCcEEEEccCcc------cccc--C-----CC--chHHHHHHHHHHHHhcCCCeEEEecCC
Confidence 7777667787666543210 0000 0 01 1113455677888888766 788997
No 95
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=95.87 E-value=0.019 Score=53.88 Aligned_cols=53 Identities=19% Similarity=0.109 Sum_probs=40.8
Q ss_pred hhHHHHHHHHH-cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 177 YNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 177 ~~~~~l~~l~~-~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
...++++++++ .|+.++++.....+ ...+++.+..+++.|.++|++|.+|+..
T Consensus 124 ~a~~el~~~~~~~g~~Gv~l~~~~~~----~~l~d~~~~~~~~~~~e~~lpv~iH~~~ 177 (336)
T 2wm1_A 124 LAVKEMERCVKELGFPGVQIGTHVNE----WDLNAQELFPVYAAAERLKCSLFVHPWD 177 (336)
T ss_dssp HHHHHHHHHHHTSCCSEEEEESEETT----EETTCGGGHHHHHHHHHHTCEEEEECCS
T ss_pred HHHHHHHHHHHccCCeEEEECCcCCC----CCCCCccHHHHHHHHHHcCCEEEECCCC
Confidence 45678888885 69999987543321 2346678999999999999999999865
No 96
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=95.86 E-value=0.33 Score=44.39 Aligned_cols=163 Identities=12% Similarity=0.051 Sum_probs=90.0
Q ss_pred HHHHHHHHhCCceEEEeCCCCCCCCC--CcHHHHHHHHHHHhcCCeeeEEeeceecCCc-hhhHHHHHHHHHcCCcEEEE
Q 015110 119 PSGTKAAAAGGITTLIDMPLNSDPST--ISTETLKLKVDAAEKRIYVDVGFWGGLVPEN-AYNASALEALLNAGVLGLKS 195 (413)
Q Consensus 119 ~~~~~~al~~GvTTv~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~G~~~ik~ 195 (413)
....+.+-+.||+..+..+... +.. ...+.+.+..+....+ +....++.+.. ....++++++.+.|+.+++.
T Consensus 50 e~~l~~md~~GV~~~V~~~~~~-~~~~~~~N~~~~~~~~~~p~r----~~~~~~v~p~~~~~a~~eL~~~~~~g~~Gi~~ 124 (291)
T 3irs_A 50 ELMFEEMAAAGIEQGVCVGRNS-SVLGSVSNADVAAVAKAYPDK----FHPVGSIEAATRKEAMAQMQEILDLGIRIVNL 124 (291)
T ss_dssp HHHHHHHHHTTCCEEEEECCEE-TTTEECCHHHHHHHHHHSTTT----EEEEEECCCSSHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHCCCCEEEEcCCCc-cccccccHHHHHHHHHHCCCc----EEEEEecCccCHHHHHHHHHHHHhCCCeEEEE
Confidence 3445667789999888765221 110 1223333333322211 22222333333 34567888866789999998
Q ss_pred eecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHH
Q 015110 196 FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTV 275 (413)
Q Consensus 196 ~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~ 275 (413)
.....+. ....+++.+..+++.|.++|++|.+|+.+.... ...+ ..| ..+..+
T Consensus 125 ~~~~~~~--~~~~~d~~~~~~~~~a~e~glpv~iH~~~~~~~------------~~~~-----~~p--------~~~~~v 177 (291)
T 3irs_A 125 EPGVWAT--PMHVDDRRLYPLYAFCEDNGIPVIMMTGGNAGP------------DITY-----TNP--------EHIDRV 177 (291)
T ss_dssp CGGGSSS--CCCTTCGGGHHHHHHHHHTTCCEEEECSSSCSS------------SGGG-----GCH--------HHHHHH
T ss_pred eCCCCCC--CCCCCCHHHHHHHHHHHHcCCeEEEeCCCCCCC------------CCcc-----CCH--------HHHHHH
Confidence 6432110 123466789999999999999999998653100 0000 111 123445
Q ss_pred HhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEccc
Q 015110 276 AKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCP 321 (413)
Q Consensus 276 a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p 321 (413)
+++ +++.++.+.|...+ ...++++.+++. -+++++++-
T Consensus 178 ~~~------~P~l~ivl~H~G~~-~~~~~~~l~~~~-~nvy~~~Sg 215 (291)
T 3irs_A 178 LGD------FPDLTVVSSHGNWP-WVQEIIHVAFRR-PNLYLSPDM 215 (291)
T ss_dssp HHH------CTTCCEEEEGGGTT-CHHHHHHHHHHC-TTEEEECGG
T ss_pred HHH------CCCCEEEeecCCcc-cHHHHHHHHhHC-CCeEecHHH
Confidence 555 35889999998765 444555554322 246665443
No 97
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=95.70 E-value=0.076 Score=50.47 Aligned_cols=114 Identities=15% Similarity=0.164 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCce
Q 015110 210 ASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 289 (413)
Q Consensus 210 ~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~ 289 (413)
.+.+++.++.|++.|+||.+|++.... +-.+.+++.++.+. ...+
T Consensus 189 ~~~f~aq~~~A~~~glPV~iH~~gr~~-------------------------------a~~e~l~iL~e~g~----~~~~ 233 (364)
T 3k2g_A 189 EKSLRGAARAQVRTGLPLMVHLPGWFR-------------------------------LAHRVLDLVEEEGA----DLRH 233 (364)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCTTSC-------------------------------CHHHHHHHHHHTTC----CGGG
T ss_pred HHHHHHHHHHHHHHCCeEEEecCCCCc-------------------------------cHHHHHHHHHHcCC----CCCc
Confidence 446888899999999999999842110 00122333333211 1234
Q ss_pred EEEEccCC-hhhHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCcc--EEc
Q 015110 290 LHIVHLSD-ASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--MLS 366 (413)
Q Consensus 290 vhi~H~s~-~~~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~--~i~ 366 (413)
+.+.|+.. . .+.+..+++-+.|..+..+..-.... ++..+ . ..| -+.+..+.|.+.++.|-.| .+.
T Consensus 234 vvi~H~~~s~-~~~e~a~~~l~~G~~I~f~g~gt~~~-----f~~~~--~-~~~--~d~~ra~~l~~lv~~gp~drille 302 (364)
T 3k2g_A 234 TVLCHMNPSH-MDPVYQATLAQRGAFLEFDMIGMDFF-----YADQG--V-QCP--SDDEVARAILGLADHGYLDRILLS 302 (364)
T ss_dssp EEECCCGGGT-TCHHHHHHHHHHTCEEEECCTTCCCE-----ETTTT--E-ECC--CHHHHHHHHHHHHHTTCGGGEEEC
T ss_pred eEEECCCCCC-CCHHHHHHHHhCCcEEEecCCccccc-----ccccc--c-ccc--cHHHHHHHHHHHHHhCCcccEEEe
Confidence 77789973 3 25777777777787766553210000 11100 0 012 1223456788888888766 789
Q ss_pred CCC
Q 015110 367 SDH 369 (413)
Q Consensus 367 sDh 369 (413)
||.
T Consensus 303 TD~ 305 (364)
T 3k2g_A 303 HDV 305 (364)
T ss_dssp CCC
T ss_pred CCC
Confidence 997
No 98
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=95.69 E-value=0.075 Score=50.69 Aligned_cols=23 Identities=30% Similarity=0.283 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhcCCCEEEecC
Q 015110 210 ASHIKEGLSVLARYKRPLLVHAE 232 (413)
Q Consensus 210 ~~~l~~~~~~A~~~g~~v~~H~e 232 (413)
.+.+..+++.|+++|+++.+|+.
T Consensus 214 ~~~~~~~~~~A~~~gl~~~~Hag 236 (371)
T 2pgf_A 214 LKEYKEIFDYVRESGVPLSVHAG 236 (371)
T ss_dssp GGGGHHHHHHHHHTTCCBEEEES
T ss_pred HHHHHHHHHHHHHcCCcEEEeeC
Confidence 57899999999999999999984
No 99
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=95.34 E-value=0.079 Score=49.87 Aligned_cols=40 Identities=15% Similarity=0.022 Sum_probs=29.7
Q ss_pred HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC
Q 015110 187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE 232 (413)
Q Consensus 187 ~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e 232 (413)
..++.++.+.-... ..+.+.+..+++.|+++|+++.+|+.
T Consensus 162 ~~~vvG~dL~g~E~------~~~~~~~~~~~~~A~~~gl~~~~Hag 201 (343)
T 3rys_A 162 HAPIAGIGLDSAEV------GNPPSKFERLYQRAAEAGLRRIAHAG 201 (343)
T ss_dssp TCCCCEEEEESCCT------TCCGGGGHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEecCCccc------CCCHHHHHHHHHHHHHCCCeEEEeeC
Confidence 35677876643221 23567889999999999999999984
No 100
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=95.02 E-value=0.48 Score=44.89 Aligned_cols=118 Identities=13% Similarity=0.098 Sum_probs=66.7
Q ss_pred cCCcEEEEeecCCCCCCCCCCCH---HHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHH
Q 015110 188 AGVLGLKSFMCPSGINDFPMTNA---SHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSW 264 (413)
Q Consensus 188 ~G~~~ik~~~~~~~~~~~~~~~~---~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 264 (413)
.|+++|-+.-... ...+ +.+..+++.|+++|+++.+|+.....
T Consensus 172 ~~vvG~dL~g~E~------~~~~~~~~~f~~~f~~A~~~gl~~~~HagE~~~---------------------------- 217 (367)
T 3iar_A 172 QTVVAIDLAGDET------IPGSSLLPGHVQAYQEAVKSGIHRTVHAGEVGS---------------------------- 217 (367)
T ss_dssp TTEEEEEEESCTT------STTGGGCHHHHHHHHHHHHHTCEEEEEESSSSC----------------------------
T ss_pred CCEEEEcCCCccc------CCCcchHHHHHHHHHHHHHcCCeeEEecCCcCC----------------------------
Confidence 4677776643221 1122 67899999999999999999843211
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEcccc-ccccccccCCCCCcceEEcCC
Q 015110 265 EEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPH-YLAFSAEEIPDGDTRFKCAPP 343 (413)
Q Consensus 265 E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~-~l~l~~~~~~~~~~~~k~~Pp 343 (413)
...+...+... |.. .|.|.....+.-++++..+++| |..++||. ++.+.. .+.
T Consensus 218 -~~~i~~al~~l----------g~~-RIgHgv~l~~d~~l~~~l~~~~--i~le~cP~SN~~l~~------------~~~ 271 (367)
T 3iar_A 218 -AEVVKEAVDIL----------KTE-RLGHGYHTLEDQALYNRLRQEN--MHFEICPWSSYLTGA------------WKP 271 (367)
T ss_dssp -HHHHHHHHHTS----------CCS-EEEECGGGGGCHHHHHHHHHTT--CEEEECHHHHHHTSS------------SCT
T ss_pred -hHHHHHHHHcc----------CCc-eeeeeeeecCCHHHHHHHHhCC--cEEEECHHHHHHhCC------------CCC
Confidence 01233333221 222 3677654312234666777776 55668996 222210 111
Q ss_pred CCChhcHHHHHHHHhcCCccEEcCCC
Q 015110 344 IRDAANKEKLWEALMDGHIDMLSSDH 369 (413)
Q Consensus 344 lr~~~~~~~L~~~l~~G~i~~i~sDh 369 (413)
++.. .+.+.++.|+..+|+||.
T Consensus 272 ~~~h----Pi~~ll~~Gv~v~l~TDd 293 (367)
T 3iar_A 272 DTEH----AVIRLKNDQANYSLNTDD 293 (367)
T ss_dssp TSCC----HHHHHHHTTCCEEECCBS
T ss_pred cccC----hHHHHHHCCCEEEECCCC
Confidence 2111 234456679999999996
No 101
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=94.38 E-value=0.17 Score=47.96 Aligned_cols=54 Identities=11% Similarity=0.113 Sum_probs=41.8
Q ss_pred hhHHHHHHHH-HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015110 177 YNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME 234 (413)
Q Consensus 177 ~~~~~l~~l~-~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~ 234 (413)
...+++++.+ +.|+.++++.....+ ...+++.+..+++.+.++|++|.+|+...
T Consensus 142 ~a~~El~r~~~~~G~~Gv~l~~~~~~----~~~~d~~~~p~~~~~~e~g~pV~iH~g~~ 196 (357)
T 3nur_A 142 AAAREFERCINDLGFKGALIMGRAQD----GFLDQDKYDIIFKTAENLDVPIYLHPAPV 196 (357)
T ss_dssp HHHHHHHHHHHTTCCCCEEEESCBTT----BCTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHHHHHHHHhhcCceEEEeCCCCCC----CCCCCccHHHHHHHHHhcCCeEEEecCCC
Confidence 4578888876 589999998743321 23566789999999999999999998653
No 102
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=93.96 E-value=0.25 Score=46.10 Aligned_cols=39 Identities=8% Similarity=-0.080 Sum_probs=28.8
Q ss_pred cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC
Q 015110 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE 232 (413)
Q Consensus 188 ~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e 232 (413)
.++.++.+.-... ..+.+.+.++++.|+++|+++.+|+.
T Consensus 160 ~~vvG~dL~g~E~------~~~~~~~~~~~~~A~~~gl~~~~Hag 198 (326)
T 3pao_A 160 DAFIAVGLDSSEV------GHPPSKFQRVFDRARSEGFLTVAHAG 198 (326)
T ss_dssp GGCSEEEEESCCT------TCCGGGGHHHHHHHHHTTCEECEEES
T ss_pred ccceeeCCCCCCC------CCCHHHHHHHHHHHHHcCCceeeecC
Confidence 4677776542221 23567889999999999999999984
No 103
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=92.81 E-value=0.15 Score=47.31 Aligned_cols=53 Identities=15% Similarity=0.278 Sum_probs=40.6
Q ss_pred hhHHHHHHHHH-cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 177 YNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 177 ~~~~~l~~l~~-~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
...++++++++ .|..+++++....+ ...+++.+..+++.+.++|++|.+|+..
T Consensus 111 ~a~~el~r~~~~~G~~Gv~l~~~~~~----~~l~d~~~~p~~~~~~e~g~pv~iH~g~ 164 (312)
T 3ij6_A 111 SACKVISSIKDDENLVGAQIFTRHLG----KSIADKEFRPVLAQAAKLHVPLWMHPVF 164 (312)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESEETT----EETTSTTTHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHHHHHHHhCCCceEeccCCCCC----CCCCCccHHHHHHHHHHcCCeEEEcCCC
Confidence 35688888875 79999998643321 2345668899999999999999999854
No 104
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=91.80 E-value=1.2 Score=40.01 Aligned_cols=38 Identities=32% Similarity=0.476 Sum_probs=27.0
Q ss_pred eeecccccCCC---CCCCccchHHHHHHHHhCCceEEEeCC
Q 015110 100 LIDVHAHLDDP---GRTEWEGFPSGTKAAAAGGITTLIDMP 137 (413)
Q Consensus 100 lID~H~H~~~~---~~~~~e~~~~~~~~al~~GvTTv~d~~ 137 (413)
+||.|+|...+ |..+.+......+.|.+.|++.++--+
T Consensus 1 m~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~~i~~T~ 41 (262)
T 3qy7_A 1 MIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIATP 41 (262)
T ss_dssp CEESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCCEEECCC
T ss_pred CEEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 68999999643 323333333478899999999998654
No 105
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=91.50 E-value=1.4 Score=39.14 Aligned_cols=40 Identities=23% Similarity=0.342 Sum_probs=28.4
Q ss_pred eeeeecccccCCC---CCCCccchHHHHHHHHhCCceEEEeCC
Q 015110 98 PGLIDVHAHLDDP---GRTEWEGFPSGTKAAAAGGITTLIDMP 137 (413)
Q Consensus 98 PGlID~H~H~~~~---~~~~~e~~~~~~~~al~~GvTTv~d~~ 137 (413)
.|++|.|+|.-.. +..+.+......+.|.+.|++.++--+
T Consensus 3 ~~m~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~~Td 45 (247)
T 2wje_A 3 MGMIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTS 45 (247)
T ss_dssp -CEEECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEEEEECCC
T ss_pred CCCEEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 4689999999543 233334445678999999999997554
No 106
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=91.22 E-value=0.42 Score=45.55 Aligned_cols=122 Identities=12% Similarity=0.021 Sum_probs=68.4
Q ss_pred cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHH
Q 015110 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEA 267 (413)
Q Consensus 188 ~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~ 267 (413)
.|++||.+.-... ......+..+++.|++.|+++.+|+-.... | ..
T Consensus 180 ~~VvG~dL~g~E~------~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~------------------------p----~~ 225 (380)
T 4gxw_A 180 DEVAGIGIDYREN------DRPPELFWKAYRDARAAGFRTTAHAGEFGM------------------------P----WR 225 (380)
T ss_dssp TTBCEEEEESCCT------TCCGGGGHHHHHHHHHTTCEEEEEESCTTC------------------------C----HH
T ss_pred CCEEEEeecCCCC------CCCHHHHHHHHHHHHHcCCCeeeeccccCC------------------------c----hH
Confidence 4677876642221 124456888999999999999999843210 1 12
Q ss_pred HHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEcccc-ccccccccCCCCCcceEEcCCCCC
Q 015110 268 AIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPH-YLAFSAEEIPDGDTRFKCAPPIRD 346 (413)
Q Consensus 268 ~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~-~l~l~~~~~~~~~~~~k~~Pplr~ 346 (413)
.+..++.+. |.. -|.|....-+.-++++..+++| |..|+||- ++.+ +..|..+.
T Consensus 226 ~i~~al~~l----------ga~-RIgHG~~~~~d~~L~~~l~~~~--I~lEvCP~SN~~l------------~~v~~~~~ 280 (380)
T 4gxw_A 226 NVETAVDLL----------HVD-RVDHGYTIVDNPELCARYAERG--IVFTVVPTNSYYL------------RTLPPDQW 280 (380)
T ss_dssp HHHHHHHTS----------CCS-EEEECGGGGGCHHHHHHHHHHT--CEEEECTTCHHHH------------HHSCTTTH
T ss_pred HHHHHHHHc----------CCc-ccccceeeccChHHHHHHHHhC--ceeEECCcchhhh------------cccccccc
Confidence 344444432 222 4667543213345677777775 56679995 1111 11221110
Q ss_pred hhcHHHHHHHHhcCCccEEcCCC
Q 015110 347 AANKEKLWEALMDGHIDMLSSDH 369 (413)
Q Consensus 347 ~~~~~~L~~~l~~G~i~~i~sDh 369 (413)
.+ .--+...++.|...+|+||.
T Consensus 281 ~~-~HP~~~l~~~Gv~vtinTDD 302 (380)
T 4gxw_A 281 AE-RHPMRKMPGLGLKIHPNTDD 302 (380)
T ss_dssp HH-HCGGGGTGGGTCEEEECCBS
T ss_pred cc-cChHHHHHHCCCeEEECCCC
Confidence 00 00134446779999999997
No 107
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=89.81 E-value=4.8 Score=36.39 Aligned_cols=123 Identities=10% Similarity=0.024 Sum_probs=68.3
Q ss_pred hhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCChhhchhhHhhccCcCCcccc
Q 015110 177 YNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEMEKGSERHVKLEDDTLDTRSY 253 (413)
Q Consensus 177 ~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~ 253 (413)
..++..+++++.|++-|.+....+..+..+....+++.+++...+.. +++++++..+.+.++..+..+- +...-
T Consensus 30 ~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT~~~~va~aAl~aGa---~iINd 106 (280)
T 1eye_A 30 DAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDTMRADVARAALQNGA---QMVND 106 (280)
T ss_dssp HHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTC---CEEEE
T ss_pred HHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeCCCHHHHHHHHHcCC---CEEEE
Confidence 34566778889999988876422111112234566777776666654 9999999999998887776531 11111
Q ss_pred ccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccC----C---------------hhhHHHHHHHHHHCCCC
Q 015110 254 STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS----D---------------ASSSLDLLMEAKTNGDS 314 (413)
Q Consensus 254 ~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s----~---------------~~~~~~~i~~ak~~G~~ 314 (413)
..+....| +++.+++++ |+++.+.|.. + .+...+.++.+.+.|+.
T Consensus 107 vsg~~~d~---------~m~~~~a~~-------~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~ 170 (280)
T 1eye_A 107 VSGGRADP---------AMGPLLAEA-------DVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVD 170 (280)
T ss_dssp TTTTSSCT---------THHHHHHHH-------TCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCH---------HHHHHHHHh-------CCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCC
Confidence 11111122 345555554 8899999973 1 11122566777888875
Q ss_pred ---EEEE
Q 015110 315 ---ITVE 318 (413)
Q Consensus 315 ---v~~e 318 (413)
+..|
T Consensus 171 ~~~IilD 177 (280)
T 1eye_A 171 PARLVLD 177 (280)
T ss_dssp GGGEEEE
T ss_pred hhhEEEE
Confidence 5544
No 108
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=88.31 E-value=8.9 Score=34.64 Aligned_cols=121 Identities=12% Similarity=0.145 Sum_probs=72.6
Q ss_pred hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc----CCCEEEecCChhhchhhHhhccCcCCcccc
Q 015110 178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY----KRPLLVHAEMEKGSERHVKLEDDTLDTRSY 253 (413)
Q Consensus 178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~----g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~ 253 (413)
.++..++++++|++-+.+....+..+..+....+++.++....+.. +++++++..+.+.++..+..+- +...-
T Consensus 40 a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~~~va~aAl~aGa---~iINd 116 (282)
T 1aj0_A 40 AVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGA---HIIND 116 (282)
T ss_dssp HHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHTTC---CEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCCHHHHHHHHHcCC---CEEEE
Confidence 4566777888999998886532211122333466777666665543 9999999999998887776531 11111
Q ss_pred ccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccC-C-----------------hhhHHHHHHHHHHCCCC-
Q 015110 254 STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS-D-----------------ASSSLDLLMEAKTNGDS- 314 (413)
Q Consensus 254 ~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s-~-----------------~~~~~~~i~~ak~~G~~- 314 (413)
..+. ..| +++.+++++ |+++.+.|.. . .+...+.++.+++.|++
T Consensus 117 vsg~-~d~---------~~~~~~a~~-------~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~ 179 (282)
T 1aj0_A 117 IRSL-SEP---------GALEAAAET-------GLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAK 179 (282)
T ss_dssp TTTT-CST---------THHHHHHHH-------TCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred CCCC-CCH---------HHHHHHHHh-------CCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCCh
Confidence 1111 122 334555554 8899999974 1 11233566778888875
Q ss_pred --EEEE
Q 015110 315 --ITVE 318 (413)
Q Consensus 315 --v~~e 318 (413)
+..|
T Consensus 180 ~~IilD 185 (282)
T 1aj0_A 180 EKLLLD 185 (282)
T ss_dssp GGEEEE
T ss_pred hhEEEe
Confidence 5555
No 109
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=87.72 E-value=9.7 Score=33.60 Aligned_cols=116 Identities=16% Similarity=0.100 Sum_probs=65.0
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCC-CEEEecCChhhchhhHhhccCcCCccccccCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKR-PLLVHAEMEKGSERHVKLEDDTLDTRSYSTYL 257 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~-~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (413)
.+.++.+.+.|..++.++......-.....+++.+.++.+.++++|+ .+.+|+...-. +
T Consensus 17 ~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~~--------------------l 76 (270)
T 3aam_A 17 AGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVN--------------------L 76 (270)
T ss_dssp HHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTCC--------------------T
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCcccC--------------------C
Confidence 34566666778888877542211001123456788888888888888 88888632100 0
Q ss_pred CCCchH--HHHHHHHHHHHHHhhcccCCCCCCceEEEEccCC---h--hhHHH-HHHHHH-HCCCCEEEEccc
Q 015110 258 KTRPPS--WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD---A--SSSLD-LLMEAK-TNGDSITVETCP 321 (413)
Q Consensus 258 ~~~p~~--~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~---~--~~~~~-~i~~ak-~~G~~v~~e~~p 321 (413)
.+.|.. .....+.+.+++|+.. |++..+.|... . -+.+. +.+.++ +.|+.+..|..|
T Consensus 77 ~s~~~~r~~~~~~~~~~i~~a~~l-------Ga~~vv~h~g~~~~~~~~~~l~~l~~~a~~~~gv~l~lEn~~ 142 (270)
T 3aam_A 77 GAEGELWEKSVASLADDLEKAALL-------GVEYVVVHPGSGRPERVKEGALKALRLAGVRSRPVLLVENTA 142 (270)
T ss_dssp TCSSTHHHHHHHHHHHHHHHHHHH-------TCCEEEECCCBSCHHHHHHHHHHHHHHHTCCSSSEEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHc-------CCCEEEECCCCCCHHHHHHHHHHHHHhhcccCCCEEEEecCC
Confidence 001111 1234566777777765 67777777654 1 02222 333444 568888888775
No 110
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=85.88 E-value=17 Score=33.12 Aligned_cols=122 Identities=13% Similarity=0.110 Sum_probs=71.1
Q ss_pred hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHH---HHHHh-cCCCEEEecCChhhchhhHhhccCcCCcccc
Q 015110 178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGL---SVLAR-YKRPLLVHAEMEKGSERHVKLEDDTLDTRSY 253 (413)
Q Consensus 178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~---~~A~~-~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~ 253 (413)
..+..+++++.|++-|.+....+..+..+....+++.+++ +..++ .++++.+...+.+.++..+..+- +...-
T Consensus 65 a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~~~~V~~aAl~aGa---~iINd 141 (297)
T 1tx2_A 65 AVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGA---HIIND 141 (297)
T ss_dssp HHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECSCHHHHHHHHHHTC---CEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCCCHHHHHHHHHcCC---CEEEE
Confidence 3456677788999988876432211112234467777776 55444 49999999999988877766531 11111
Q ss_pred ccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCC-h----------hhHHHHHHHHHHCCCC---EEEE
Q 015110 254 STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD-A----------SSSLDLLMEAKTNGDS---ITVE 318 (413)
Q Consensus 254 ~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~-~----------~~~~~~i~~ak~~G~~---v~~e 318 (413)
..+....| +++.+++++ |+++.+.|..- + +...+.++.+++.|++ +..|
T Consensus 142 vsg~~~d~---------~m~~~aa~~-------g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilD 204 (297)
T 1tx2_A 142 IWGAKAEP---------KIAEVAAHY-------DVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILD 204 (297)
T ss_dssp TTTTSSCT---------HHHHHHHHH-------TCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCCCCH---------HHHHHHHHh-------CCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEe
Confidence 11111112 334555554 88999999731 1 1233566778888875 5555
No 111
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=84.34 E-value=3.6 Score=38.94 Aligned_cols=53 Identities=15% Similarity=0.250 Sum_probs=41.5
Q ss_pred hHHHHHHHHHc-CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015110 178 NASALEALLNA-GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME 234 (413)
Q Consensus 178 ~~~~l~~l~~~-G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~ 234 (413)
..++++++++. |+.++++.....+ ...+++.+..+++.+.++|++|.+|+...
T Consensus 161 a~~EL~r~~~~~G~~Gv~l~~~~~g----~~l~d~~~~pi~~~~~e~g~pV~iH~g~~ 214 (373)
T 4inf_A 161 SAREIHRGARELGFKGIQINSHTQG----RYLDEEFFDPIFRALVEVDQPLYIHPATS 214 (373)
T ss_dssp HHHHHHHHHHTSCCCCEEECSCBTT----BCTTSGGGHHHHHHHHHHTCCEEECCCCC
T ss_pred HHHHHHHHHhhcCceEEEECCCCCC----CCCCCcchHHHHHHHHHcCCeEEECCCCC
Confidence 56789998875 9999997643321 23566789999999999999999998654
No 112
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=83.65 E-value=9.2 Score=33.58 Aligned_cols=108 Identities=13% Similarity=0.020 Sum_probs=62.4
Q ss_pred HHHHHHHHHcCCcEEEEeecCC-CC---CC--CCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccc
Q 015110 179 ASALEALLNAGVLGLKSFMCPS-GI---ND--FPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS 252 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~-~~---~~--~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~ 252 (413)
.+.++.+.+.|..++.++.... +. +. ....+.+.+.++.+.++++|+.+..|.-....
T Consensus 25 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~---------------- 88 (262)
T 3p6l_A 25 TEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAE---------------- 88 (262)
T ss_dssp HHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCS----------------
T ss_pred HHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCc----------------
Confidence 4556666778888887753210 00 00 11246677788888888888887666421100
Q ss_pred cccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEEEEcccc
Q 015110 253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPH 322 (413)
Q Consensus 253 ~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~ 322 (413)
. ...+.+.+++|+.. |++..+.|-... .--++.+.+++.|+.+..|..|.
T Consensus 89 ------~------~~~~~~~i~~A~~l-------Ga~~v~~~~~~~-~~~~l~~~a~~~gv~l~~En~~~ 138 (262)
T 3p6l_A 89 ------K------SSDWEKMFKFAKAM-------DLEFITCEPALS-DWDLVEKLSKQYNIKISVHNHPQ 138 (262)
T ss_dssp ------S------TTHHHHHHHHHHHT-------TCSEEEECCCGG-GHHHHHHHHHHHTCEEEEECCSS
T ss_pred ------c------HHHHHHHHHHHHHc-------CCCEEEecCCHH-HHHHHHHHHHHhCCEEEEEeCCC
Confidence 0 01356667777654 677667775432 22244555667788777777665
No 113
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=81.42 E-value=5.8 Score=36.84 Aligned_cols=59 Identities=15% Similarity=0.146 Sum_probs=42.4
Q ss_pred hhhHHHHHHHH-HcCCcEEEEeecCCCCC-CCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015110 176 AYNASALEALL-NAGVLGLKSFMCPSGIN-DFPMTNASHIKEGLSVLARYKRPLLVHAEME 234 (413)
Q Consensus 176 ~~~~~~l~~l~-~~G~~~ik~~~~~~~~~-~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~ 234 (413)
....+++++++ +.|+.++++.....+.. .....+++.+..+++.|.++|++|.+|+...
T Consensus 122 ~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~~~~ 182 (350)
T 2gwg_A 122 KTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVSTS 182 (350)
T ss_dssp GGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCCC-
T ss_pred HHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECCCCC
Confidence 34678899888 57999998754322100 0123566789999999999999999998653
No 114
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=79.46 E-value=5.6 Score=39.25 Aligned_cols=40 Identities=23% Similarity=0.203 Sum_probs=25.9
Q ss_pred cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHH--HHhcCCCEEEecC
Q 015110 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSV--LARYKRPLLVHAE 232 (413)
Q Consensus 188 ~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~--A~~~g~~v~~H~e 232 (413)
.+++||-+.-... ...+...+..+++. |++.|+++.+|+.
T Consensus 291 ~~VvG~DLaG~E~-----~g~p~~~f~~~f~~~~A~~~gl~~t~HAG 332 (508)
T 3lgd_A 291 TVVAGFDLVGHED-----TGHSLHDYKEALMIPAKDGVKLPYFFHAG 332 (508)
T ss_dssp TTEEEEEEESCTT-----TSCCTGGGHHHHTHHHHTTCCCCBCCEEC
T ss_pred CceEEeccCCCCC-----CCCCHHHHHHHHHHHHHHHcCCceeeecc
Confidence 4567776532211 01234567778887 8899999999983
No 115
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=76.35 E-value=2.4 Score=40.94 Aligned_cols=58 Identities=14% Similarity=0.045 Sum_probs=43.0
Q ss_pred hhHHHHHHHHHcCCcEEEEeecCC-CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015110 177 YNASALEALLNAGVLGLKSFMCPS-GINDFPMTNASHIKEGLSVLARYKRPLLVHAEME 234 (413)
Q Consensus 177 ~~~~~l~~l~~~G~~~ik~~~~~~-~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~ 234 (413)
...++++++++.|+.++++...+. +..+....+++.+..+++.+.++|++|.+|+.+.
T Consensus 176 ~a~~EL~r~~~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~g~~ 234 (423)
T 4dzi_A 176 RAVEEVDFVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDS 234 (423)
T ss_dssp HHHHHHHHHHHTTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeCCCC
Confidence 467889999999999999753221 1111234566789999999999999999998654
No 116
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=74.83 E-value=27 Score=30.35 Aligned_cols=48 Identities=13% Similarity=-0.098 Sum_probs=28.9
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEe
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVH 230 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 230 (413)
.+.++.+.+.|..++.++... . ....+.+.+.++.+.++++|+.+..+
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~--~--~~~~~~~~~~~~~~~l~~~gl~i~~~ 80 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFH--L--PLNSTDEQIRAFHDKCAAHKVTGYAV 80 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTT--S--CTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhCCCEEEEeccc--C--CCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 345566666777777665321 0 01235666777777777778776554
No 117
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=74.41 E-value=29 Score=33.73 Aligned_cols=106 Identities=13% Similarity=0.054 Sum_probs=61.7
Q ss_pred HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCC-eeeEEe--eceecCCch-hhHHHHHHHHHcCCcEEE
Q 015110 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI-YVDVGF--WGGLVPENA-YNASALEALLNAGVLGLK 194 (413)
Q Consensus 119 ~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~-~~~~~l~~l~~~G~~~ik 194 (413)
....+.++.+|+..++-+. ..+. .+.+...++.+...+ .+.+.+ ..+ ...+. ...+.++++.+.|+..|.
T Consensus 103 ~~~v~~a~~~Gvd~i~if~-~~sd----~~ni~~~i~~ak~~G~~v~~~i~~~~~-~~~~~e~~~~~a~~l~~~Gad~I~ 176 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFD-AMND----VRNMQQALQAVKKMGAHAQGTLCYTTS-PVHNLQTWVDVAQQLAELGVDSIA 176 (464)
T ss_dssp HHHHHHHHHTTCCEEEECC-TTCC----THHHHHHHHHHHHTTCEEEEEEECCCC-TTCCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHhCCcCEEEEEE-ecCH----HHHHHHHHHHHHHCCCEEEEEEEeeeC-CCCCHHHHHHHHHHHHHCCCCEEE
Confidence 3456788899999887664 2221 244555554444322 222222 111 11122 234566677788998765
Q ss_pred EeecCCCCCCCCCCCHHHHHHHHHHHHh-cCCCEEEecCChhh
Q 015110 195 SFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG 236 (413)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~e~~~~ 236 (413)
+-- ......+..+.++++..++ .++++.+|++|...
T Consensus 177 l~D------T~G~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~G 213 (464)
T 2nx9_A 177 LKD------MAGILTPYAAEELVSTLKKQVDVELHLHCHSTAG 213 (464)
T ss_dssp EEE------TTSCCCHHHHHHHHHHHHHHCCSCEEEEECCTTS
T ss_pred EcC------CCCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence 421 1235678888888887764 68999999988764
No 118
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=73.73 E-value=52 Score=29.75 Aligned_cols=122 Identities=11% Similarity=0.047 Sum_probs=71.8
Q ss_pred hhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCChhhchhhHhhccCcCCcccc
Q 015110 177 YNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEMEKGSERHVKLEDDTLDTRSY 253 (413)
Q Consensus 177 ~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~ 253 (413)
..++..++++++|+.-+-+....+..+..+....+++.+++...+.. ++++++-..+.+.++..+..+- +...-
T Consensus 47 ~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSIDT~~~~Va~aAl~aGa---~iINd 123 (294)
T 2y5s_A 47 DALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSIDTYKPAVMRAALAAGA---DLIND 123 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEECCCHHHHHHHHHHTC---SEEEE
T ss_pred HHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHcCC---CEEEE
Confidence 34566778888999888775422111111233456777766655543 8999999999888877776531 11111
Q ss_pred ccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccC----C---------------hhhHHHHHHHHHHCCCC
Q 015110 254 STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS----D---------------ASSSLDLLMEAKTNGDS 314 (413)
Q Consensus 254 ~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s----~---------------~~~~~~~i~~ak~~G~~ 314 (413)
..+.. . .+++.+++++ |+++.+.|.. + .+...+.++.+.+.|+.
T Consensus 124 Vsg~~-d---------~~m~~~~a~~-------~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~ 186 (294)
T 2y5s_A 124 IWGFR-Q---------PGAIDAVRDG-------NSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVA 186 (294)
T ss_dssp TTTTC-S---------TTHHHHHSSS-------SCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCC-c---------hHHHHHHHHh-------CCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHHcCCC
Confidence 11111 1 2345566654 8999999973 1 01223566677888875
Q ss_pred ---EEEE
Q 015110 315 ---ITVE 318 (413)
Q Consensus 315 ---v~~e 318 (413)
+..|
T Consensus 187 ~~~IilD 193 (294)
T 2y5s_A 187 AERICVD 193 (294)
T ss_dssp GGGEEEE
T ss_pred hhhEEEe
Confidence 6655
No 119
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=71.92 E-value=43 Score=29.56 Aligned_cols=47 Identities=11% Similarity=-0.077 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 231 (413)
+.++.+.+.|..++.++.... ...+.+.+.++.+.++++|+.+..+.
T Consensus 25 ~~l~~~~~~G~~~vEl~~~~~-----~~~~~~~~~~~~~~l~~~gl~~~~~~ 71 (290)
T 3tva_A 25 VHLEVAQDLKVPTVQVHAPHP-----HTRTREHAQAFRAKCDAAGIQVTVIF 71 (290)
T ss_dssp BCHHHHHHTTCSEEEEECCCG-----GGCSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEecCCCC-----CcCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 356777788999998764321 12567889999999999999988774
No 120
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=69.31 E-value=55 Score=28.63 Aligned_cols=117 Identities=14% Similarity=0.078 Sum_probs=68.3
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCC---EEEecCCh-hhchhhHhhccCcCCccccc
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP---LLVHAEME-KGSERHVKLEDDTLDTRSYS 254 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~---v~~H~e~~-~~~~~~~~~~~~~~~~~~~~ 254 (413)
.+.++.+.+.|..++.++......-..+..+.+.+.++.+.++++|+. +.+|.... ...
T Consensus 15 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~----------------- 77 (285)
T 1qtw_A 15 ANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLG----------------- 77 (285)
T ss_dssp HHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTT-----------------
T ss_pred HHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCcccccC-----------------
Confidence 456777778899999875322110001235678889999999999998 67786211 000
Q ss_pred cCCCCCchH--HHHHHHHHHHHHHhhcccCCCCCCceEEEEccCC------hhhH----HHHHHH--HHHCCCCEEEEcc
Q 015110 255 TYLKTRPPS--WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD------ASSS----LDLLME--AKTNGDSITVETC 320 (413)
Q Consensus 255 ~~~~~~p~~--~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~------~~~~----~~~i~~--ak~~G~~v~~e~~ 320 (413)
...|.. .....+.+.+++|+.. |++..+.|... .++. ++.+++ +++.|+.+..|..
T Consensus 78 ---~~~~~~r~~~~~~~~~~i~~A~~l-------Ga~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv~l~lEn~ 147 (285)
T 1qtw_A 78 ---HPVTEALEKSRDAFIDEMQRCEQL-------GLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENT 147 (285)
T ss_dssp ---CSSHHHHHHHHHHHHHHHHHHHHT-------TCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSCEEEEECC
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHHc-------CCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEecC
Confidence 001111 1234677788888875 77777777542 1122 222222 3446888888877
Q ss_pred cc
Q 015110 321 PH 322 (413)
Q Consensus 321 p~ 322 (413)
+.
T Consensus 148 ~~ 149 (285)
T 1qtw_A 148 AG 149 (285)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 121
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=65.58 E-value=65 Score=27.63 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=25.7
Q ss_pred eeecccccCCCCCCCccchHHHHHHHHhCCceEEEeC
Q 015110 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDM 136 (413)
Q Consensus 100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d~ 136 (413)
++|.|+|...+. ....+.....+.|.+.|++.+.--
T Consensus 3 ~~DlH~Ht~~Sd-~g~~~~~e~v~~A~~~Gl~~iaiT 38 (245)
T 1m65_A 3 PVDLHMHTVAST-HAYSTLSDYIAQAKQKGIKLFAIT 38 (245)
T ss_dssp CEECCBCCTTST-TCCCCHHHHHHHHHHHTCCEEEEE
T ss_pred ceEeCcCCCCCC-CCCCcHHHHHHHHHHCCCCEEEEC
Confidence 689999987652 122245667888899999987643
No 122
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=63.90 E-value=40 Score=29.89 Aligned_cols=119 Identities=15% Similarity=0.125 Sum_probs=72.9
Q ss_pred hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc-CCCEEEecCChhhchhhHhhc-cCcCCcccccc
Q 015110 178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRPLLVHAEMEKGSERHVKLE-DDTLDTRSYST 255 (413)
Q Consensus 178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~e~~~~~~~~~~~~-~~~~~~~~~~~ 255 (413)
..+..+++.+.|++-+-+.... .+....+++.+++...++. ++|+++-..+.+.++..+... | .+..
T Consensus 27 a~~~a~~~v~~GAdiIDIg~g~-----~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~G--a~iI---- 95 (262)
T 1f6y_A 27 VQEWARRQEEGGARALDLNVGP-----AVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKN--RAMI---- 95 (262)
T ss_dssp HHHHHHHHHHHTCSEEEEBCC---------CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSS--CEEE----
T ss_pred HHHHHHHHHHCCCcEEEECCCC-----CCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCC--CCEE----
Confidence 3556677788999888765421 1234677899999888876 889999988888877666642 1 0010
Q ss_pred CCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccC---Ch-------hhHHHHHHHHHHCCCC---EEEE
Q 015110 256 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS---DA-------SSSLDLLMEAKTNGDS---ITVE 318 (413)
Q Consensus 256 ~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s---~~-------~~~~~~i~~ak~~G~~---v~~e 318 (413)
.+... +...+.+++.++.++ |+++.+.|.. .+ +...+.++.+++.|+. +..|
T Consensus 96 --Ndvs~--~~d~~~~~~~~~a~~-------~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilD 160 (262)
T 1f6y_A 96 --NSTNA--EREKVEKLFPLAVEH-------GAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYID 160 (262)
T ss_dssp --EEECS--CHHHHHHHHHHHHHT-------TCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred --EECCC--CcccHHHHHHHHHHh-------CCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEe
Confidence 00010 013345667777764 8999999983 11 0123556667777873 5544
No 123
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=63.79 E-value=88 Score=30.91 Aligned_cols=107 Identities=10% Similarity=0.057 Sum_probs=61.3
Q ss_pred HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCC-eeeEEeecee-cCCch-hhHHHHHHHHHcCCcEEEE
Q 015110 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI-YVDVGFWGGL-VPENA-YNASALEALLNAGVLGLKS 195 (413)
Q Consensus 119 ~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~-~~~~~l~~l~~~G~~~ik~ 195 (413)
....+.++..|+..++-+. ..+. .+.+...++.+...+ .+...+.... ...+. ...+.++++.+.|+..|.+
T Consensus 120 ~~~ve~a~~aGvd~vrIf~-s~sd----~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L 194 (539)
T 1rqb_A 120 DRFVDKSAENGMDVFRVFD-AMND----PRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIAL 194 (539)
T ss_dssp HHHHHHHHHTTCCEEEECC-TTCC----THHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhCCCCEEEEEE-ehhH----HHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 4456788899999887664 2222 244455455444322 2221221101 11122 2345566777889986654
Q ss_pred eecCCCCCCCCCCCHHHHHHHHHHHHh-c--CCCEEEecCChhh
Q 015110 196 FMCPSGINDFPMTNASHIKEGLSVLAR-Y--KRPLLVHAEMEKG 236 (413)
Q Consensus 196 ~~~~~~~~~~~~~~~~~l~~~~~~A~~-~--g~~v~~H~e~~~~ 236 (413)
-- ......+..+.++++..++ . ++++.+|++|...
T Consensus 195 ~D------T~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~G 232 (539)
T 1rqb_A 195 KD------MAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTG 232 (539)
T ss_dssp EE------TTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTS
T ss_pred CC------CCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCC
Confidence 21 1235678888888887765 5 7899999988764
No 124
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=63.65 E-value=70 Score=28.75 Aligned_cols=112 Identities=11% Similarity=0.101 Sum_probs=58.5
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHcCCcEE
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGVLGL 193 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~G~~~i 193 (413)
.+.+....+..+.+|+..++-++........+.+.-.+..+.......-++....+... ...+.++..+...+.|++++
T Consensus 23 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadav 102 (294)
T 3b4u_A 23 IDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNI 102 (294)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEE
Confidence 34455667778899999998776221112223333333333322111001111222222 23445666666777899988
Q ss_pred EEeecCCCCCCCCC-CCHHHHHHHHHH-HHhc---CCCEEEec
Q 015110 194 KSFMCPSGINDFPM-TNASHIKEGLSV-LARY---KRPLLVHA 231 (413)
Q Consensus 194 k~~~~~~~~~~~~~-~~~~~l~~~~~~-A~~~---g~~v~~H~ 231 (413)
-+.. + .+.. .+.+.+.+-++. |... ++|+.++-
T Consensus 103 lv~~-P----~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn 140 (294)
T 3b4u_A 103 LLAP-P----SYFKNVSDDGLFAWFSAVFSKIGKDARDILVYN 140 (294)
T ss_dssp EECC-C----CSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred EEcC-C----cCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 6532 1 1222 366777766655 4455 89998863
No 125
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=63.20 E-value=51 Score=29.80 Aligned_cols=117 Identities=16% Similarity=0.114 Sum_probs=64.7
Q ss_pred hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHH---HhcCCCEEEecCChhhchhhHhhccCcCCccccc
Q 015110 178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVL---ARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYS 254 (413)
Q Consensus 178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A---~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~ 254 (413)
..+..++++++|++-+-+....+..+..+....+++.+++... ++.++++++-..+.+.++..+..+- +...-.
T Consensus 54 a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSIDT~~~~Va~aAl~aGa---~iINdV 130 (294)
T 2dqw_A 54 ALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSVDTRKPEVAEEALKLGA---HLLNDV 130 (294)
T ss_dssp CHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEEECSCHHHHHHHHHHTC---SEEECS
T ss_pred HHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhCC---CEEEEC
Confidence 4566778888999888765422111111122344555554444 4348999999999888877776531 111101
Q ss_pred cCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccC--Ch-----------------hhHHHHHHHHHHCCCC
Q 015110 255 TYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS--DA-----------------SSSLDLLMEAKTNGDS 314 (413)
Q Consensus 255 ~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s--~~-----------------~~~~~~i~~ak~~G~~ 314 (413)
.+. . ..+++.+++++ |+++.+.|.. .+ +...+.++.+++.|+.
T Consensus 131 sg~-~---------d~~m~~v~a~~-------~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~ 192 (294)
T 2dqw_A 131 TGL-R---------DERMVALAARH-------GVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVP 192 (294)
T ss_dssp SCS-C---------CHHHHHHHHHH-------TCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CCC-C---------ChHHHHHHHHh-------CCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHHCCCC
Confidence 111 1 12445566665 8999999985 22 0123556777888885
No 126
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=62.36 E-value=27 Score=31.68 Aligned_cols=52 Identities=10% Similarity=0.123 Sum_probs=34.0
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc----CCCEEEecCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY----KRPLLVHAEM 233 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~----g~~v~~H~e~ 233 (413)
.+.++.+++.|+.++-+. +.+ +..+..+.+|-+++++.+.+. .++|.+++-.
T Consensus 31 ~~lv~~li~~Gv~gl~v~-Gtt--GE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~ 86 (301)
T 3m5v_A 31 ARLIKRQIENGIDAVVPV-GTT--GESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGS 86 (301)
T ss_dssp HHHHHHHHHTTCCEEECS-STT--TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCC
T ss_pred HHHHHHHHHcCCCEEEEC-ccc--cChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCC
Confidence 345666678899987442 222 345677888888877776653 4678888743
No 127
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=62.28 E-value=45 Score=29.35 Aligned_cols=21 Identities=10% Similarity=0.067 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHhcCCCEE-Eec
Q 015110 211 SHIKEGLSVLARYKRPLL-VHA 231 (413)
Q Consensus 211 ~~l~~~~~~A~~~g~~v~-~H~ 231 (413)
+.+++.++.|+++|.+.. +|+
T Consensus 84 ~~~~~~i~~A~~lG~~~v~~~~ 105 (286)
T 3dx5_A 84 EKCEQLAILANWFKTNKIRTFA 105 (286)
T ss_dssp HHHHHHHHHHHHHTCCEEEECS
T ss_pred HHHHHHHHHHHHhCCCEEEEcC
Confidence 355666666666666543 444
No 128
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=61.39 E-value=97 Score=30.84 Aligned_cols=120 Identities=11% Similarity=0.070 Sum_probs=76.8
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc-CCCEEEecCChhhchhhHhhccCcCCccccccCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYL 257 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (413)
.+..+++.+.|++-+-+.++. .+....+++.+++...++. ++|+++-..+.+.++..+.... ......
T Consensus 343 ~~~A~~~v~~GAdiIDIgpg~-----~~v~~~ee~~rvv~~i~~~~~vpisIDT~~~~v~eaal~~~~-G~~iIN----- 411 (566)
T 1q7z_A 343 IKEAKTQVEKGAEVLDVNFGI-----ESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTERALRAYP-GRSLFN----- 411 (566)
T ss_dssp HHHHHHHHHTTCSEEEEECSS-----GGGSCHHHHHHHHHHHHHHTCSCEEEECCCHHHHHHHHHHCS-SCCEEE-----
T ss_pred HHHHHHHHHCCCCEEEECCCC-----CCCCHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHHhcC-CCCEEE-----
Confidence 455667778999988776322 2345788999998888754 9999999999988887776521 001111
Q ss_pred CCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCC---------hhhHHHHHHHHHHCCCC--EEEEc
Q 015110 258 KTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD---------ASSSLDLLMEAKTNGDS--ITVET 319 (413)
Q Consensus 258 ~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~---------~~~~~~~i~~ak~~G~~--v~~e~ 319 (413)
+... +..-+.+++.+++++ |+++.+.|... .+...+.++.+.+.|++ |..|-
T Consensus 412 -dis~--~~~~~~~~~~~~~~~-------g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~~~Gi~~~IilDP 474 (566)
T 1q7z_A 412 -SAKV--DEEELEMKINLLKKY-------GGTLIVLLMGKDVPKSFEERKEYFEKALKILERHDFSDRVIFDP 474 (566)
T ss_dssp -EEES--CHHHHHHHHHHHHHH-------CCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHHTTCGGGEEEEC
T ss_pred -ECCc--chhhHHHHHHHHHHh-------CCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHHHCCCCCcEEEeC
Confidence 0000 112235667777765 89999999863 11234566778888984 65553
No 129
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=61.28 E-value=85 Score=27.54 Aligned_cols=96 Identities=14% Similarity=0.029 Sum_probs=55.4
Q ss_pred cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHH
Q 015110 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEA 267 (413)
Q Consensus 188 ~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~ 267 (413)
.-++.+|+.... ....+.+.+++.++.++++|+.+..=- ...+..+.+ .
T Consensus 37 ~yID~lKfg~Gt-----~~l~~~~~l~eki~l~~~~gV~v~~GG---Tl~E~~~~q-----------------------g 85 (251)
T 1qwg_A 37 DYIDFVKFGWGT-----SAVIDRDVVKEKINYYKDWGIKVYPGG---TLFEYAYSK-----------------------G 85 (251)
T ss_dssp GGCSEEEECTTG-----GGGSCHHHHHHHHHHHHTTTCEEEECH---HHHHHHHHT-----------------------T
T ss_pred hhcceEEecCce-----eeecCHHHHHHHHHHHHHcCCeEECCc---HHHHHHHHc-----------------------C
Confidence 345666764322 124577788889999999888876521 011101110 1
Q ss_pred HHHHHHHHHhhcccCCCCCCceEEEEccCC---hhhHHHHHHHHHHCCCCEEEEcc
Q 015110 268 AIRELLTVAKDTRTDGPAEGAHLHIVHLSD---ASSSLDLLMEAKTNGDSITVETC 320 (413)
Q Consensus 268 ~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~---~~~~~~~i~~ak~~G~~v~~e~~ 320 (413)
.+.+.++.+++.|+. .+.|+-.+. .++-.++|+.+++.|..|..|+-
T Consensus 86 ~~~~yl~~~k~lGf~------~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG 135 (251)
T 1qwg_A 86 KFDEFLNECEKLGFE------AVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVG 135 (251)
T ss_dssp CHHHHHHHHHHHTCC------EEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cHHHHHHHHHHcCCC------EEEECCCcccCCHHHHHHHHHHHHHCCCEEeeecc
Confidence 355666777765321 144444432 13456788888888888877763
No 130
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=59.22 E-value=70 Score=29.50 Aligned_cols=50 Identities=8% Similarity=0.028 Sum_probs=34.2
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh-c--CCCEEEecCChh
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR-Y--KRPLLVHAEMEK 235 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~-~--g~~v~~H~e~~~ 235 (413)
+..+.+.+.|+..+.+.- .....+++.+.++++..++ . ++++.+|++|..
T Consensus 153 ~ia~~~~~~Ga~~i~l~D------T~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~ 205 (345)
T 1nvm_A 153 EQGKLMESYGATCIYMAD------SGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNL 205 (345)
T ss_dssp HHHHHHHHHTCSEEEEEC------TTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTT
T ss_pred HHHHHHHHCCCCEEEECC------CcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCc
Confidence 444455567887665431 1234578888888888775 4 689999998865
No 131
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=58.62 E-value=81 Score=28.30 Aligned_cols=106 Identities=13% Similarity=0.146 Sum_probs=57.6
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCC-CCCcHHHH----HHHHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHcC
Q 015110 116 EGFPSGTKAAAAGGITTLIDMPLNSDP-STISTETL----KLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAG 189 (413)
Q Consensus 116 e~~~~~~~~al~~GvTTv~d~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~G 189 (413)
+.+....+..+.+|+..++-++ .+.. ...+.+.- +...+...++.. ...+... ...+.++..+...+.|
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~G-ttGE~~~Ls~~Er~~v~~~~~~~~~grvp----viaGvg~~~t~~ai~la~~A~~~G 95 (294)
T 2ehh_A 21 EALGNLIEFHVDNGTDAILVCG-TTGESPTLTFEEHEKVIEFAVKRAAGRIK----VIAGTGGNATHEAVHLTAHAKEVG 95 (294)
T ss_dssp HHHHHHHHHHHTTTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSE----EEEECCCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCEEEECc-cccChhhCCHHHHHHHHHHHHHHhCCCCc----EEEecCCCCHHHHHHHHHHHHhcC
Confidence 4455667777899999998776 3221 12222222 222233333322 2222222 2344566666777789
Q ss_pred CcEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 190 VLGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 190 ~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
++++-+.. + .+...+.+.+.+-++. |...++|+.+.-
T Consensus 96 adavlv~~-P----~y~~~s~~~l~~~f~~va~a~~lPiilYn 133 (294)
T 2ehh_A 96 ADGALVVV-P----YYNKPTQRGLYEHFKTVAQEVDIPIIIYN 133 (294)
T ss_dssp CSEEEEEC-C----CSSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCEEEECC-C----CCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99886542 1 1112366766666654 556789998863
No 132
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=58.61 E-value=90 Score=26.95 Aligned_cols=17 Identities=6% Similarity=-0.199 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHhcCCCE
Q 015110 211 SHIKEGLSVLARYKRPL 227 (413)
Q Consensus 211 ~~l~~~~~~A~~~g~~v 227 (413)
+.+++.++.|+++|.+.
T Consensus 85 ~~~~~~i~~a~~lG~~~ 101 (272)
T 2q02_A 85 KKTEGLLRDAQGVGARA 101 (272)
T ss_dssp HHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHhCCCE
Confidence 34555566666666553
No 133
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=58.27 E-value=57 Score=29.73 Aligned_cols=107 Identities=19% Similarity=0.222 Sum_probs=58.7
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCC-CCCCCcHH----HHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHHcC
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNS-DPSTISTE----TLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 189 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G 189 (413)
.+.+....+..+.+||..++-++ .+ .....+.+ .++...+...++..+-. +......+.++..+...+.|
T Consensus 32 ~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~~~Ls~eEr~~v~~~~v~~~~grvpVia----Gvg~~t~~ai~la~~A~~~G 106 (316)
T 3e96_A 32 WHHYKETVDRIVDNGIDVIVPCG-NTSEFYALSLEEAKEEVRRTVEYVHGRALVVA----GIGYATSTAIELGNAAKAAG 106 (316)
T ss_dssp HHHHHHHHHHHHTTTCCEECTTS-GGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE----EECSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEEeCc-cccCcccCCHHHHHHHHHHHHHHhCCCCcEEE----EeCcCHHHHHHHHHHHHhcC
Confidence 34556667778899999998775 22 11222222 22222333333332222 22223345566666777789
Q ss_pred CcEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 190 VLGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 190 ~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
++++-+.. + .+...+.+.+.+-++. |...++|+.+.-
T Consensus 107 adavlv~~-P----~y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (316)
T 3e96_A 107 ADAVMIHM-P----IHPYVTAGGVYAYFRDIIEALDFPSLVYF 144 (316)
T ss_dssp CSEEEECC-C----CCSCCCHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred CCEEEEcC-C----CCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 99886531 1 1222366766666554 445689998874
No 134
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=57.76 E-value=1.4e+02 Score=29.75 Aligned_cols=36 Identities=14% Similarity=-0.076 Sum_probs=27.1
Q ss_pred eeecccccCCCCCCCccchHHHHHHHHhCCceEEEeCC
Q 015110 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMP 137 (413)
Q Consensus 100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d~~ 137 (413)
++|.|+|...+ ....+.....+.|.+.|++.+.--.
T Consensus 328 ~~DlH~HT~~S--DG~~t~eemv~~A~~~Gl~~IaiTD 363 (578)
T 2w9m_A 328 RGMIHTHSTWS--DGGASIREMAEATLTLGHEFLGTAD 363 (578)
T ss_dssp CEEEEECCTTT--TCSSCHHHHHHHHHHTTCSEEEECE
T ss_pred ceEEEecCCcc--CCCCCHHHHHHHHHHCCCeEEEEcC
Confidence 58999998765 2334556778899999999887543
No 135
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=57.75 E-value=96 Score=27.02 Aligned_cols=117 Identities=10% Similarity=0.074 Sum_probs=68.3
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCC---EEEecCCh-hhchhhHhhccCcCCccccc
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP---LLVHAEME-KGSERHVKLEDDTLDTRSYS 254 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~---v~~H~e~~-~~~~~~~~~~~~~~~~~~~~ 254 (413)
.+.++.+.+.|..++.++......-..+..+.+.+.++.+.++++|+. +.+|+.-. ...
T Consensus 15 ~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~h~~~~~~~~----------------- 77 (287)
T 2x7v_A 15 DRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWENAFCHSGYLINLA----------------- 77 (287)
T ss_dssp GGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGGEEEECCTTCCTT-----------------
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcceeEEecccccccC-----------------
Confidence 356777778899999886422110011234678889999999999998 88896321 110
Q ss_pred cCCCCCchH--HHHHHHHHHHHHHhhcccCCCCCCceEEEEccCC-----hhhH----HHHHHHHH--HCCCCEEEEccc
Q 015110 255 TYLKTRPPS--WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD-----ASSS----LDLLMEAK--TNGDSITVETCP 321 (413)
Q Consensus 255 ~~~~~~p~~--~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~-----~~~~----~~~i~~ak--~~G~~v~~e~~p 321 (413)
...|.. .....+.+.+++|+.. |++..+.|... .++. ++.++++- ..|+.+..|..+
T Consensus 78 ---~~~~~~r~~~~~~~~~~i~~A~~l-------G~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~ 147 (287)
T 2x7v_A 78 ---SPKDDIWQKSVELLKKEVEICRKL-------GIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVS 147 (287)
T ss_dssp ---CSSHHHHHHHHHHHHHHHHHHHHH-------TCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCC
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHHc-------CCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCC
Confidence 001111 1234677788888875 77777777431 1122 23333332 258888888765
Q ss_pred c
Q 015110 322 H 322 (413)
Q Consensus 322 ~ 322 (413)
.
T Consensus 148 ~ 148 (287)
T 2x7v_A 148 Q 148 (287)
T ss_dssp C
T ss_pred C
Confidence 4
No 136
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=57.58 E-value=96 Score=27.47 Aligned_cols=44 Identities=16% Similarity=0.147 Sum_probs=31.9
Q ss_pred hhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015110 176 AYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (413)
Q Consensus 176 ~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 231 (413)
.+..+...++++.|+.++|+= + .+++...++.+.+.|+||+.|.
T Consensus 94 ~~a~~~a~rl~kaGa~aVklE-------g-----g~e~~~~I~al~~agipV~gHi 137 (264)
T 1m3u_A 94 EQAFENAATVMRAGANMVKIE-------G-----GEWLVETVQMLTERAVPVCGHL 137 (264)
T ss_dssp HHHHHHHHHHHHTTCSEEECC-------C-----SGGGHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEC-------C-----cHHHHHHHHHHHHCCCCeEeee
Confidence 344566678888999999872 1 1345666777778999999996
No 137
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=57.56 E-value=1.1e+02 Score=27.74 Aligned_cols=117 Identities=10% Similarity=-0.043 Sum_probs=67.0
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh-cCCCEEE-ec----CChhhchhhHhhccCcCCccc
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLV-HA----EMEKGSERHVKLEDDTLDTRS 252 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~-~g~~v~~-H~----e~~~~~~~~~~~~~~~~~~~~ 252 (413)
.+..+++++.|++-+-+....+. .+....+.++..++++..++ .++|+++ -+ .+.+.++..+..+..+.....
T Consensus 77 ~~~A~~~v~~GAdiIDIg~~Str-P~~~~vs~eee~~vV~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iIN 155 (310)
T 2h9a_B 77 VAWAKKCVEYGADIVALRLVSAH-PDGQNRSGAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLLS 155 (310)
T ss_dssp HHHHHHHHHTTCSEEEEECGGGC-TTTTCCCHHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEE
T ss_pred HHHHHHHHHcCCcEEEEeCccCC-CCCCCCCHHHHHHHHHHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEEE
Confidence 44556667889988877543221 12223566666666666654 5999999 77 555555555543310000111
Q ss_pred cccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCC
Q 015110 253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGD 313 (413)
Q Consensus 253 ~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~ 313 (413)
-... . ....++.++.++ |+++.+.|....+...++++.+.+.|+
T Consensus 156 dvs~-~---------~~~~~~~~aa~~-------g~~vv~m~~~dv~~l~~~~~~a~~~Gi 199 (310)
T 2h9a_B 156 SATK-D---------NYKPIVATCMVH-------GHSVVASAPLDINLSKQLNIMIMEMNL 199 (310)
T ss_dssp EECT-T---------THHHHHHHHHHH-------TCEEEEECSSCHHHHHHHHHHHHTTTC
T ss_pred ECCC-C---------ccHHHHHHHHHh-------CCCEEEEChhHHHHHHHHHHHHHHCCC
Confidence 0000 0 134456666665 899999997443245567778888887
No 138
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=57.44 E-value=74 Score=28.49 Aligned_cols=107 Identities=13% Similarity=0.195 Sum_probs=57.3
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHcCC
Q 015110 116 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGV 190 (413)
Q Consensus 116 e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~G~ 190 (413)
+.+....+..+.+|+..++-++........+.+.-.+ ..+...++. ....+... ...+.++..+...+.|+
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~----pviaGvg~~~t~~ai~la~~a~~~Ga 96 (289)
T 2yxg_A 21 DGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRV----QVIAGAGSNCTEEAIELSVFAEDVGA 96 (289)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSS----EEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCC----cEEEeCCCCCHHHHHHHHHHHHhcCC
Confidence 4455667777899999998776211112223222222 223333332 22222222 23345566666677899
Q ss_pred cEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 191 LGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 191 ~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
+++-+.. + .+...+.+.+.+-++. |...++|+.++-
T Consensus 97 davlv~~-P----~y~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (289)
T 2yxg_A 97 DAVLSIT-P----YYNKPTQEGLRKHFGKVAESINLPIVLYN 133 (289)
T ss_dssp SEEEEEC-C----CSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEECC-C----CCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9886532 1 1112366766666654 556789998863
No 139
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=57.37 E-value=94 Score=28.08 Aligned_cols=106 Identities=14% Similarity=0.122 Sum_probs=58.1
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCC-CCCcHHHHH----HHHHHHhcCCeeeEEeeceec-CCchhhHHHHHHHHHc
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDP-STISTETLK----LKVDAAEKRIYVDVGFWGGLV-PENAYNASALEALLNA 188 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~ 188 (413)
.+.+....+..+.+|+..++-++ .+.. ...+.+.-. ...+...++..+ ..+.. ....+.++..+...+.
T Consensus 35 ~~~l~~lv~~li~~Gv~gi~v~G-ttGE~~~Lt~~Er~~v~~~~~~~~~grvpv----iaGvg~~~t~~ai~la~~a~~~ 109 (304)
T 3l21_A 35 TATAARLANHLVDQGCDGLVVSG-TTGESPTTTDGEKIELLRAVLEAVGDRARV----IAGAGTYDTAHSIRLAKACAAE 109 (304)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTTSEE----EEECCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCc-cccchhhCCHHHHHHHHHHHHHHhCCCCeE----EEeCCCCCHHHHHHHHHHHHHc
Confidence 34556667778899999998876 2221 122222222 222333333222 22222 2234556666777778
Q ss_pred CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHH-HhcCCCEEEe
Q 015110 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSVL-ARYKRPLLVH 230 (413)
Q Consensus 189 G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A-~~~g~~v~~H 230 (413)
|++++-+.. + .+...+.+.+.+-++.. ...++|+.+.
T Consensus 110 Gadavlv~~-P----~y~~~s~~~l~~~f~~va~a~~lPiilY 147 (304)
T 3l21_A 110 GAHGLLVVT-P----YYSKPPQRGLQAHFTAVADATELPMLLY 147 (304)
T ss_dssp TCSEEEEEC-C----CSSCCCHHHHHHHHHHHHTSCSSCEEEE
T ss_pred CCCEEEECC-C----CCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999886532 1 11123667666666554 4568999887
No 140
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=57.23 E-value=52 Score=29.36 Aligned_cols=54 Identities=15% Similarity=0.083 Sum_probs=35.4
Q ss_pred hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCC-CEEEec
Q 015110 178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKR-PLLVHA 231 (413)
Q Consensus 178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~-~v~~H~ 231 (413)
..+.++.+.+.|..++.++............+.+.+.++.+.++++|+ .+.+|+
T Consensus 20 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~ 74 (303)
T 3aal_A 20 LLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHA 74 (303)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEec
Confidence 345677777889999988643221001112345667778888889999 789996
No 141
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=57.21 E-value=90 Score=28.15 Aligned_cols=106 Identities=12% Similarity=0.119 Sum_probs=57.2
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCC-CCCcHHHHH----HHHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHcC
Q 015110 116 EGFPSGTKAAAAGGITTLIDMPLNSDP-STISTETLK----LKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAG 189 (413)
Q Consensus 116 e~~~~~~~~al~~GvTTv~d~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~G 189 (413)
+.+....+..+.+|+..++-++ .+.. ...+.+.-. ...+...++..+ ..+... ...+.++..+...+.|
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~G-tTGE~~~Ls~eEr~~v~~~~~~~~~grvpV----iaGvg~~~t~~ai~la~~A~~~G 107 (301)
T 1xky_A 33 AKTTKLVNYLIDNGTTAIVVGG-TTGESPTLTSEEKVALYRHVVSVVDKRVPV----IAGTGSNNTHASIDLTKKATEVG 107 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCE----EEECCCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEECc-cccChhhCCHHHHHHHHHHHHHHhCCCceE----EeCCCCCCHHHHHHHHHHHHhcC
Confidence 3455566777899999998776 2221 122322222 222333333222 122222 2344566667777789
Q ss_pred CcEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 190 VLGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 190 ~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
++++-+.. + .+...+.+.+.+-++. |...++|+.+.-
T Consensus 108 adavlv~~-P----~y~~~s~~~l~~~f~~va~a~~lPiilYn 145 (301)
T 1xky_A 108 VDAVMLVA-P----YYNKPSQEGMYQHFKAIAESTPLPVMLYN 145 (301)
T ss_dssp CSEEEEEC-C----CSSCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CCEEEEcC-C----CCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99886532 1 1112366776666654 555789998863
No 142
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=56.70 E-value=1.1e+02 Score=27.51 Aligned_cols=108 Identities=13% Similarity=0.116 Sum_probs=58.7
Q ss_pred CccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHc
Q 015110 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNA 188 (413)
Q Consensus 114 ~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~ 188 (413)
+.+.+....+..+.+|+..++-++........+.+.-.. ..+...++.. ...+... ...+.++..+...+.
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvp----viaGvg~~st~~ai~la~~A~~~ 110 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAK----LIAGVGTNNTRTSVELAEAAASA 110 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSE----EEEECCCSCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCc----EEecCCCCCHHHHHHHHHHHHhc
Confidence 344556667778899999998776222222223322222 2233333322 2222222 234456666777778
Q ss_pred CCcEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEe
Q 015110 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVH 230 (413)
Q Consensus 189 G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H 230 (413)
|++++-+.. + .+...+.+.+.+-++. |...++|+.+.
T Consensus 111 Gadavlv~~-P----~y~~~~~~~l~~~f~~ia~a~~lPiilY 148 (304)
T 3cpr_A 111 GADGLLVVT-P----YYSKPSQEGLLAHFGAIAAATEVPICLY 148 (304)
T ss_dssp TCSEEEEEC-C----CSSCCCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCEEEECC-C----CCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999886542 1 1112366666666654 55678999886
No 143
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=56.46 E-value=78 Score=28.87 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=63.4
Q ss_pred hHHHHHHHHHcCCcEEEEeecCCCCCCC-----CCCCHHHHHHHH---HHHHh-cCCCEEEecCChhhchhhHhhccCcC
Q 015110 178 NASALEALLNAGVLGLKSFMCPSGINDF-----PMTNASHIKEGL---SVLAR-YKRPLLVHAEMEKGSERHVKLEDDTL 248 (413)
Q Consensus 178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~-----~~~~~~~l~~~~---~~A~~-~g~~v~~H~e~~~~~~~~~~~~~~~~ 248 (413)
.++..++++++|++-|-+....+ ..+. +....++++++. +..++ .++++++-..+.+.++..+..+-
T Consensus 51 al~~A~~~v~~GAdIIDIGgeST-rPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~~~Va~aAl~aGa--- 126 (314)
T 3tr9_A 51 ALRTAEKMVDEGADILDIGGEAT-NPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSRPRVMREAVNTGA--- 126 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCS-CTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSCHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHCCCCEEEECCCCC-CCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCCHHHHHHHHHcCC---
Confidence 35566677778887776643211 1111 111245554443 33333 48888888888887776665431
Q ss_pred CccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCC-h----------------hhHHHHHHHHHHC
Q 015110 249 DTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD-A----------------SSSLDLLMEAKTN 311 (413)
Q Consensus 249 ~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~-~----------------~~~~~~i~~ak~~ 311 (413)
+...-..+. .. .+++.++.++ |+++.+.|... + +...+.++.+++.
T Consensus 127 ~iINDVsg~-~~---------~~m~~v~a~~-------g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~ 189 (314)
T 3tr9_A 127 DMINDQRAL-QL---------DDALTTVSAL-------KTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKA 189 (314)
T ss_dssp CEEEETTTT-CS---------TTHHHHHHHH-------TCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEECCCC-Cc---------hHHHHHHHHh-------CCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHc
Confidence 111101111 11 2345555554 88999999641 1 1123566778888
Q ss_pred CCC---EEEE
Q 015110 312 GDS---ITVE 318 (413)
Q Consensus 312 G~~---v~~e 318 (413)
|+. |..|
T Consensus 190 GI~~~~IilD 199 (314)
T 3tr9_A 190 GISEDRIIID 199 (314)
T ss_dssp TCCGGGEEEE
T ss_pred CCCHhHEEEe
Confidence 984 5544
No 144
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=56.23 E-value=1.1e+02 Score=27.20 Aligned_cols=45 Identities=7% Similarity=-0.136 Sum_probs=32.7
Q ss_pred HHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015110 182 LEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (413)
Q Consensus 182 l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 231 (413)
++.+.+.|..++.+..... . ...+..+.++.+.++++|+.+..|.
T Consensus 42 l~~~~~~G~~~vEl~~~~~----~-~~~~~~~~~l~~~l~~~gl~i~~~~ 86 (309)
T 2hk0_A 42 IEKVAKLGFDIIEVAAHHI----N-EYSDAELATIRKSAKDNGIILTAGI 86 (309)
T ss_dssp HHHHHHTTCSEEEEEHHHH----T-TSCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHhCCCEEEeccCCc----c-ccchhhHHHHHHHHHHcCCeEEEec
Confidence 7777788999988764311 0 1234678888888999999998886
No 145
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=55.92 E-value=36 Score=30.89 Aligned_cols=51 Identities=20% Similarity=0.195 Sum_probs=32.8
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAE 232 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e 232 (413)
.+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+. .++|.+++-
T Consensus 39 ~~lv~~li~~Gv~gi~v~-Gtt--GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg 92 (304)
T 3l21_A 39 ARLANHLVDQGCDGLVVS-GTT--GESPTTTDGEKIELLRAVLEAVGDRARVIAGAG 92 (304)
T ss_dssp HHHHHHHHHTTCSEEEES-STT--TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC
T ss_pred HHHHHHHHHcCCCEEEeC-ccc--cchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 345566677899887442 222 345567888877777776652 457777764
No 146
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=55.81 E-value=44 Score=30.40 Aligned_cols=50 Identities=14% Similarity=0.156 Sum_probs=29.8
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEec
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHA 231 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~ 231 (413)
.+.++.+++.|+.++-+.- .+ +..+.++.+|-+++++.+.+. .++|.+++
T Consensus 32 ~~lv~~li~~Gv~gl~v~G-tT--GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv 84 (309)
T 3fkr_A 32 KRAVDFMIDAGSDGLCILA-NF--SEQFAITDDERDVLTRTILEHVAGRVPVIVTT 84 (309)
T ss_dssp HHHHHHHHHTTCSCEEESS-GG--GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC
T ss_pred HHHHHHHHHcCCCEEEECc-cc--cCcccCCHHHHHHHHHHHHHHhCCCCcEEEec
Confidence 3445566678888875421 11 234567777777777766542 35666665
No 147
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=55.48 E-value=93 Score=28.09 Aligned_cols=105 Identities=10% Similarity=0.019 Sum_probs=56.1
Q ss_pred chHHHHHHHHhCCceEEEeCCCCCCC-CCCcHHHHHH----HHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHcCC
Q 015110 117 GFPSGTKAAAAGGITTLIDMPLNSDP-STISTETLKL----KVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGV 190 (413)
Q Consensus 117 ~~~~~~~~al~~GvTTv~d~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~G~ 190 (413)
.+....+..+.+|+..++-++ .+.. ...+.+.-.. ..+...++.. ...+... ...+.++..+...+.|+
T Consensus 33 ~l~~lv~~li~~Gv~Gl~v~G-tTGE~~~Ls~eEr~~v~~~~~~~~~grvp----ViaGvg~~~t~~ai~la~~A~~~Ga 107 (303)
T 2wkj_A 33 SLRRLVQFNIQQGIDGLYVGG-STGEAFVQSLSEREQVLEIVAEEAKGKIK----LIAHVGCVSTAESQQLAASAKRYGF 107 (303)
T ss_dssp HHHHHHHHHHHTTCSEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTTSE----EEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCEEEECe-eccChhhCCHHHHHHHHHHHHHHhCCCCc----EEEecCCCCHHHHHHHHHHHHhCCC
Confidence 345566777899999998776 2221 1223322222 2233333322 2222222 23345566666677899
Q ss_pred cEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcC-CCEEEec
Q 015110 191 LGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYK-RPLLVHA 231 (413)
Q Consensus 191 ~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g-~~v~~H~ 231 (413)
+++-+.. + .+...+.+.+.+-++. |...+ +|+.+.-
T Consensus 108 davlv~~-P----~y~~~s~~~l~~~f~~va~a~~~lPiilYn 145 (303)
T 2wkj_A 108 DAVSAVT-P----FYYPFSFEEHCDHYRAIIDSADGLPMVVYN 145 (303)
T ss_dssp SEEEEEC-C----CSSCCCHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEecC-C----CCCCCCHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 9886532 1 1112366777666654 44456 9998863
No 148
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=55.24 E-value=82 Score=28.61 Aligned_cols=108 Identities=11% Similarity=0.140 Sum_probs=58.2
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHH----HHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHHcCC
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGV 190 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ 190 (413)
.+.+....+..+.+|+..++-++........+.+.- +...+...++.. ...+......+.++..+...+.|+
T Consensus 32 ~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvp----ViaGvg~st~~ai~la~~A~~~Ga 107 (314)
T 3d0c_A 32 WKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRAT----VVAGIGYSVDTAIELGKSAIDSGA 107 (314)
T ss_dssp HHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSE----EEEEECSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCe----EEecCCcCHHHHHHHHHHHHHcCC
Confidence 344556677788999999987651111112222222 222233333322 222232233445666667777899
Q ss_pred cEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 191 LGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 191 ~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
+++-+.. + .+...+.+.+.+-++. |...++|+.+.-
T Consensus 108 davlv~~-P----~y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 108 DCVMIHQ-P----VHPYITDAGAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp SEEEECC-C----CCSCCCHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred CEEEECC-C----CCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 9886532 1 1112366666666544 556789998865
No 149
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=55.12 E-value=1.2e+02 Score=28.98 Aligned_cols=121 Identities=10% Similarity=0.018 Sum_probs=68.9
Q ss_pred hhHHHHHHHHHcCCcEEEEeecCCCCCCCCCC-CHHHHHHH---HHHHHh------cCCCEEEecCChhhchhhHh--hc
Q 015110 177 YNASALEALLNAGVLGLKSFMCPSGINDFPMT-NASHIKEG---LSVLAR------YKRPLLVHAEMEKGSERHVK--LE 244 (413)
Q Consensus 177 ~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~-~~~~l~~~---~~~A~~------~g~~v~~H~e~~~~~~~~~~--~~ 244 (413)
...+..++++++|++-|-+....+ ..+.... ..+++.++ ++..++ .++++++-..+.+.++..+. .+
T Consensus 213 ~al~~A~~mv~~GAdIIDIGgeST-rPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~~~VaeaAL~~~aG 291 (442)
T 3mcm_A 213 QRKLNLDELIQSGAEIIDIGAEST-KPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRKLEVMQKILAKHHD 291 (442)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCC-CC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHCCCCEEEECCCCC-CCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCCHHHHHHHHhhCCC
Confidence 456777888899999887653221 1122223 35677775 555554 38999999999888877775 32
Q ss_pred cCcCC-ccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCC-h----------------hhHHHHHH
Q 015110 245 DDTLD-TRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD-A----------------SSSLDLLM 306 (413)
Q Consensus 245 ~~~~~-~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~-~----------------~~~~~~i~ 306 (413)
- .= ..+. .+ . ...+++.+++++ |+++.+.|... + +...+.++
T Consensus 292 a--~i~INDV-sg--~--------~d~~m~~v~a~~-------g~~vVlMh~~G~P~tmq~~~y~dvv~ev~~~l~~~i~ 351 (442)
T 3mcm_A 292 I--IWMINDV-EC--N--------NIEQKAQLIAKY-------NKKYVIIHNLGITDRNQYLDKENAIDNVCDYIEQKKQ 351 (442)
T ss_dssp G--CCEEEEC-CC--T--------THHHHHHHHHHH-------TCEEEEECC----------------CTHHHHHHHHHH
T ss_pred C--CEEEEcC-CC--C--------CChHHHHHHHHh-------CCeEEEECCCCCCccccccCcccHHHHHHHHHHHHHH
Confidence 1 00 1110 01 0 123556666665 88999999642 1 01125566
Q ss_pred HHHHCCC---CEEEE
Q 015110 307 EAKTNGD---SITVE 318 (413)
Q Consensus 307 ~ak~~G~---~v~~e 318 (413)
.+++.|+ +|..|
T Consensus 352 ~a~~aGI~~~~IilD 366 (442)
T 3mcm_A 352 ILLKHGIAQQNIYFD 366 (442)
T ss_dssp HHHHHTCCGGGEEEE
T ss_pred HHHHcCCCHHHEEEe
Confidence 7778887 35544
No 150
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=54.84 E-value=58 Score=29.40 Aligned_cols=51 Identities=14% Similarity=0.038 Sum_probs=35.2
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh-c-CCCEEEecCChh
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR-Y-KRPLLVHAEMEK 235 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~-~-g~~v~~H~e~~~ 235 (413)
.+.++.+.+.|++.+.+.- . ....++....++++..++ . ++++.+|++|..
T Consensus 162 ~~~~~~~~~~G~d~i~l~D-T-----~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~ 214 (302)
T 2ftp_A 162 AWVARELQQMGCYEVSLGD-T-----IGVGTAGATRRLIEAVASEVPRERLAGHFHDTY 214 (302)
T ss_dssp HHHHHHHHHTTCSEEEEEE-S-----SSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTT
T ss_pred HHHHHHHHHcCCCEEEEeC-C-----CCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCc
Confidence 3445556678998776541 1 124678888888888775 4 579999998765
No 151
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=54.47 E-value=1.2e+02 Score=27.05 Aligned_cols=49 Identities=12% Similarity=0.054 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhhcccCCCCCCceEEEEccCCh-------hhHHHHHHHHHHCCCCEEEEcccc
Q 015110 267 AAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-------SSSLDLLMEAKTNGDSITVETCPH 322 (413)
Q Consensus 267 ~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~-------~~~~~~i~~ak~~G~~v~~e~~p~ 322 (413)
..+.++++.+.+. |+.+.|.--+.. ....++++.+++.|+.++...=.|
T Consensus 205 ~~~~~il~~~~~~-------g~~lEiN~~~l~~~~~~~~yp~~~~~~~~~~~g~~i~igSDAH 260 (283)
T 3dcp_A 205 EKFRVILALVKKR-------DYELDFNTAGLFKPLCGETYPPKKIVTLASELQIPFVYGSDSH 260 (283)
T ss_dssp HHHHHHHHHHHHH-------TCEEEEECGGGGSTTCCSCBSCHHHHHHHHHTTCCEEEECCBS
T ss_pred HHHHHHHHHHHHc-------CCEEEEechHhcCCCCCCcCCHHHHHHHHHHcCCCEEEEcCCC
Confidence 3577888877765 777776653311 013578999999999988766555
No 152
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=54.39 E-value=85 Score=28.23 Aligned_cols=107 Identities=16% Similarity=0.182 Sum_probs=58.5
Q ss_pred CccchHHHHHHHHhCCceEEEeCCCCCCC-CCCcHHH----HHHHHHHHhcCCeeeEEeeceec-CCchhhHHHHHHHHH
Q 015110 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDP-STISTET----LKLKVDAAEKRIYVDVGFWGGLV-PENAYNASALEALLN 187 (413)
Q Consensus 114 ~~e~~~~~~~~al~~GvTTv~d~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~ 187 (413)
+.+.+....+..+.+|+..++-++ .+.. ...+.+. ++...+...++..+- .+.. ....+.++..+...+
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~G-ttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi----aGvg~~~t~~ai~la~~a~~ 100 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVG-TTGESATLSVEEHTAVIEAVVKHVAKRVPVI----AGTGANNTVEAIALSQAAEK 100 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE----EECCCSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCc-cccCcccCCHHHHHHHHHHHHHHhCCCCcEE----EeCCCcCHHHHHHHHHHHHH
Confidence 344556667778899999998876 2221 1222222 222223333332221 1222 233455666777778
Q ss_pred cCCcEEEEeecCCCCCCCCCCCHHHHHHHHH-HHHhcCCCEEEe
Q 015110 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVH 230 (413)
Q Consensus 188 ~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H 230 (413)
.|++++-+.. + .+...+.+.+.+-++ .|...++|+.+.
T Consensus 101 ~Gadavlv~~-P----~y~~~~~~~l~~~f~~va~a~~lPiilY 139 (297)
T 3flu_A 101 AGADYTLSVV-P----YYNKPSQEGIYQHFKTIAEATSIPMIIY 139 (297)
T ss_dssp TTCSEEEEEC-C----CSSCCCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred cCCCEEEECC-C----CCCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 8999886532 1 111235666666654 455579999887
No 153
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=54.16 E-value=56 Score=29.54 Aligned_cols=51 Identities=8% Similarity=0.112 Sum_probs=32.2
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCC
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEM 233 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~ 233 (413)
+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+. .++|.+++-.
T Consensus 37 ~lv~~li~~Gv~gl~v~-GtT--GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~ 90 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVG-GTT--GESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS 90 (301)
T ss_dssp HHHHHHHHTTCCEEEES-STT--TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HHHHHHHHcCCCEEEEC-ccc--cChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCC
Confidence 45566677899887542 211 345567888877777766642 3677777643
No 154
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=53.88 E-value=80 Score=28.42 Aligned_cols=52 Identities=6% Similarity=0.158 Sum_probs=33.8
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh---cCCCEEEecCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 233 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~e~ 233 (413)
.+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+ -.++|.+|+-.
T Consensus 31 ~~lv~~li~~Gv~gl~~~-Gtt--GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~ 85 (297)
T 3flu_A 31 RDLIDWHIENGTDGIVAV-GTT--GESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGA 85 (297)
T ss_dssp HHHHHHHHHTTCCEEEES-STT--TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HHHHHHHHHcCCCEEEeC-ccc--cCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCC
Confidence 345566677899987542 222 34567788888888777665 24688888743
No 155
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=53.47 E-value=1.3e+02 Score=27.36 Aligned_cols=99 Identities=14% Similarity=0.026 Sum_probs=55.2
Q ss_pred hhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHH---HHHHHhc--CCCEEEecCChhhchhhHhhccCcCCcc
Q 015110 177 YNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEG---LSVLARY--KRPLLVHAEMEKGSERHVKLEDDTLDTR 251 (413)
Q Consensus 177 ~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~---~~~A~~~--g~~v~~H~e~~~~~~~~~~~~~~~~~~~ 251 (413)
..++..++++++|++-|-+....+.. +.+....++++++ ++..++. ++++++-..+.+.++..+..+- +..
T Consensus 66 ~a~~~A~~~v~~GAdIIDIGgeSTrP-G~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT~~~~VaeaAl~aGa---~iI 141 (318)
T 2vp8_A 66 AARDAVHRAVADGADVIDVGGVKAGP-GERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGA---DLI 141 (318)
T ss_dssp HHHHHHHHHHHTTCSEEEEC-----------CHHHHHHHHHHHHHHHHHHSTTCEEEEECSCHHHHHHHHHHTC---CEE
T ss_pred HHHHHHHHHHHCCCCEEEECCCcCCC-CCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeCCCHHHHHHHHHhCC---CEE
Confidence 34566778888999888765322111 1123346677776 4444443 8999999988888777776531 111
Q ss_pred ccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccC
Q 015110 252 SYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS 296 (413)
Q Consensus 252 ~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s 296 (413)
.-..+. ..| +++.+++++ |+++.+.|..
T Consensus 142 NDVsg~-~d~---------~m~~vaa~~-------g~~vVlmh~~ 169 (318)
T 2vp8_A 142 NDTWGG-VDP---------AMPEVAAEF-------GAGLVCAHTG 169 (318)
T ss_dssp EETTSS-SST---------THHHHHHHH-------TCEEEEECC-
T ss_pred EECCCC-Cch---------HHHHHHHHh-------CCCEEEECCC
Confidence 111111 112 345555554 8999999963
No 156
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=53.37 E-value=1.4e+02 Score=30.55 Aligned_cols=107 Identities=16% Similarity=0.088 Sum_probs=61.7
Q ss_pred HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCC-eeeEEeece--ecC-C----chh-hHHHHHHHHHcC
Q 015110 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI-YVDVGFWGG--LVP-E----NAY-NASALEALLNAG 189 (413)
Q Consensus 119 ~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~-~----~~~-~~~~l~~l~~~G 189 (413)
....+.++..|+..++-+. . ....+.+...++.+.... .+.+..... +.+ . +.+ ..+.++++.+.|
T Consensus 200 ~~~i~~a~~~Gvd~irIf~-s----~n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~G 274 (718)
T 3bg3_A 200 FKFCEVAKENGMDVFRVFD-S----LNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAG 274 (718)
T ss_dssp HHHHHHHHHHTCCEEEEEC-S----SCCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCcCEEEEEe-c----HHHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcC
Confidence 3456778888998876553 1 123445555555554332 222211111 011 1 112 244556667789
Q ss_pred CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh-c-CCCEEEecCChhh
Q 015110 190 VLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR-Y-KRPLLVHAEMEKG 236 (413)
Q Consensus 190 ~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~-~-g~~v~~H~e~~~~ 236 (413)
+..|.+- +......+..+.++++..++ . ++++.+|++|...
T Consensus 275 a~~I~l~------DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~G 317 (718)
T 3bg3_A 275 THILCIK------DMAGLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSG 317 (718)
T ss_dssp CSEEEEE------CTTSCCCHHHHHHHHHHHHHHSTTCCEEEECCCTTS
T ss_pred CCEEEEc------CcCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcc
Confidence 9876542 12345788888888888765 5 7899999988764
No 157
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=52.51 E-value=45 Score=30.42 Aligned_cols=52 Identities=13% Similarity=0.218 Sum_probs=33.4
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEM 233 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~ 233 (413)
.+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+. .++|.+++-.
T Consensus 46 ~~li~~li~~Gv~Gl~v~-GtT--GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~ 100 (315)
T 3si9_A 46 CNFVEWQITQGINGVSPV-GTT--GESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGS 100 (315)
T ss_dssp HHHHHHHHHTTCSEEECS-STT--TTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC
T ss_pred HHHHHHHHHcCCCEEEeC-ccc--cCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC
Confidence 345566678899987432 222 345677888888877776652 4677777643
No 158
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=52.29 E-value=98 Score=28.38 Aligned_cols=107 Identities=10% Similarity=0.038 Sum_probs=57.8
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCC-CCCcHHHH----HHHHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHc
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDP-STISTETL----KLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNA 188 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~ 188 (413)
.+.+....+..+.+|+..++-++ .+.. ...+.+.- +...+...++.. ...+... ...+.++..+...+.
T Consensus 54 ~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~~~Ls~eEr~~vi~~~ve~~~grvp----ViaGvg~~st~eai~la~~A~~~ 128 (332)
T 2r8w_A 54 IEAFSALIARLDAAEVDSVGILG-STGIYMYLTREERRRAIEAAATILRGRRT----LMAGIGALRTDEAVALAKDAEAA 128 (332)
T ss_dssp HHHHHHHHHHHHHHTCSEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSE----EEEEECCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECc-cccChhhCCHHHHHHHHHHHHHHhCCCCc----EEEecCCCCHHHHHHHHHHHHhc
Confidence 34455667777899999998776 2221 12232222 222233333322 2222222 234455666666778
Q ss_pred CCcEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 189 G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
|++++-+.. + .+...+.+.+.+-++. |...++|+.+.-
T Consensus 129 Gadavlv~~-P----~Y~~~s~~~l~~~f~~VA~a~~lPiilYn 167 (332)
T 2r8w_A 129 GADALLLAP-V----SYTPLTQEEAYHHFAAVAGATALPLAIYN 167 (332)
T ss_dssp TCSEEEECC-C----CSSCCCHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred CCCEEEECC-C----CCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999885531 1 1112366766666654 556789998863
No 159
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=51.88 E-value=90 Score=26.97 Aligned_cols=73 Identities=18% Similarity=0.168 Sum_probs=49.9
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC-hhhchhhHhhccCcCCccccccCCC
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM-EKGSERHVKLEDDTLDTRSYSTYLK 258 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~-~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (413)
..+.-+.+.|..++|.|.-. .....+|++.+.+.|.+.|. .+-.-. -+
T Consensus 149 tAiaml~dmG~~SvKffPm~------Gl~~l~E~~avAka~a~~g~--~lEPTGGId----------------------- 197 (249)
T 3m0z_A 149 TAIALLKDMGGSSIKYFPMG------GLKHRAEFEAVAKACAAHDF--WLEPTGGID----------------------- 197 (249)
T ss_dssp HHHHHHHHTTCCEEEECCCT------TTTTHHHHHHHHHHHHHTTC--EEEEBSSCC-----------------------
T ss_pred HHHHHHHHcCCCeeeEeecC------CcccHHHHHHHHHHHHHcCc--eECCCCCcc-----------------------
Confidence 45666677899999987322 13578999999999999998 333211 11
Q ss_pred CCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCC
Q 015110 259 TRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD 297 (413)
Q Consensus 259 ~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~ 297 (413)
...+..+++.+.+. |++..|-|+-+
T Consensus 198 -------l~N~~~I~~i~l~a-------Gv~~viPHIYs 222 (249)
T 3m0z_A 198 -------LENYSEILKIALDA-------GVSKIIPHIYS 222 (249)
T ss_dssp -------TTTHHHHHHHHHHH-------TCSCBCCBCCG
T ss_pred -------HhhHHHHHHHHHHc-------CCCeecccccc
Confidence 12356667777765 78888999864
No 160
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=51.63 E-value=1.3e+02 Score=26.68 Aligned_cols=121 Identities=12% Similarity=0.120 Sum_probs=70.6
Q ss_pred hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc-CCCEEEecCChhhchhhHhhccCcCCccccccC
Q 015110 178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTY 256 (413)
Q Consensus 178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~ 256 (413)
..+..+++.+.|+.-+-+....+ ..-..+.+..+++..++. ++|+++-..+.+.++..+.... ..+...
T Consensus 36 a~~~a~~~v~~GAdiIDIg~~s~-----~~eE~~rv~~vi~~l~~~~~~pisIDT~~~~v~~aal~a~~-Ga~iIN---- 105 (271)
T 2yci_X 36 IQEWARRQAEKGAHYLDVNTGPT-----ADDPVRVMEWLVKTIQEVVDLPCCLDSTNPDAIEAGLKVHR-GHAMIN---- 105 (271)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSC-----SSCHHHHHHHHHHHHHHHCCCCEEEECSCHHHHHHHHHHCC-SCCEEE----
T ss_pred HHHHHHHHHHCCCCEEEEcCCcC-----chhHHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHhCC-CCCEEE----
Confidence 45566777788988887654221 112345666667766654 8999999888888776666521 001110
Q ss_pred CCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccC------Ch----hhHHHHHHHHHHCCCC---EEEEc
Q 015110 257 LKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS------DA----SSSLDLLMEAKTNGDS---ITVET 319 (413)
Q Consensus 257 ~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s------~~----~~~~~~i~~ak~~G~~---v~~e~ 319 (413)
+... +..-+.+++.+++++ |+++.+.|.. +. +...+.++.+.+.|++ +..|-
T Consensus 106 --dvs~--~~d~~~~~~~~~a~~-------~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDP 170 (271)
T 2yci_X 106 --STSA--DQWKMDIFFPMAKKY-------EAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDP 170 (271)
T ss_dssp --EECS--CHHHHHHHHHHHHHH-------TCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred --ECCC--CccccHHHHHHHHHc-------CCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEec
Confidence 0000 112234566666665 8899999983 11 1233566677788875 66554
No 161
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=51.24 E-value=1.2e+02 Score=26.97 Aligned_cols=40 Identities=28% Similarity=0.369 Sum_probs=25.3
Q ss_pred chHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCCh-hhHHHHHHHH
Q 015110 261 PPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-SSSLDLLMEA 308 (413)
Q Consensus 261 p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~-~~~~~~i~~a 308 (413)
|...+...+.+.+++|+++ +.|+ +.|.-.. ++.++++++.
T Consensus 108 ~~~~Q~~~F~~ql~lA~e~-------~lPv-~iH~r~a~~~~l~il~~~ 148 (287)
T 3rcm_A 108 PRPLQEKALEAQLTLAAQL-------RLPV-FLHERDASERLLAILKDY 148 (287)
T ss_dssp CHHHHHHHHHHHHHHHHHH-------TCCE-EEEEESCHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHh-------CCCE-EEEcCCcHHHHHHHHHHc
Confidence 4455667888999999886 6664 4555432 2455555544
No 162
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=51.00 E-value=49 Score=30.01 Aligned_cols=50 Identities=22% Similarity=0.199 Sum_probs=31.5
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecC
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAE 232 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e 232 (413)
+.++.+++.|+.++-+.-+ + +..+.++.+|-+++++.+.+. .++|.+++-
T Consensus 39 ~lv~~li~~Gv~Gl~v~Gt-T--GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg 91 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGS-N--GEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSG 91 (307)
T ss_dssp HHHHHHTTSCCSEEEESSG-G--GTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECcc-c--cchhhCCHHHHHHHHHHHHHHcCCCCcEEEecC
Confidence 3455556688888754311 1 234567888888888877763 356777763
No 163
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=50.71 E-value=65 Score=28.00 Aligned_cols=108 Identities=15% Similarity=0.091 Sum_probs=62.0
Q ss_pred CCCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceec---CCchhhHHHHHHHHHc
Q 015110 112 RTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV---PENAYNASALEALLNA 188 (413)
Q Consensus 112 ~~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~ 188 (413)
....+++...++.+..+|+-+++..|. .+ ...+...+...+.+....++. ........++++.++.
T Consensus 32 ~~t~~~i~~l~~~a~~~~~~aVcv~p~----------~v-~a~~~l~~~~~v~v~tvigFP~G~~~~~~k~~e~~~Av~~ 100 (234)
T 1n7k_A 32 RATEEDVRNLVREASDYGFRCAVLTPV----------YT-VKISGLAEKLGVKLCSVIGFPLGQAPLEVKLVEAQTVLEA 100 (234)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEECHH----------HH-HHHHHHHHHHTCCEEEEESTTTCCSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEchH----------Hh-eeehHhCCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHc
Confidence 345678888999999999999986551 11 111111111011222111111 1122345778888999
Q ss_pred CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 189 G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
|++.+.+.+....... .-.+++.++.+.++++|+++-+=.|.
T Consensus 101 GAdEID~vinig~~~~---~v~~ei~~v~~a~~~~g~~lKvIlEt 142 (234)
T 1n7k_A 101 GATELDVVPHLSLGPE---AVYREVSGIVKLAKSYGAVVKVILEA 142 (234)
T ss_dssp TCCEEEECCCGGGCHH---HHHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred CCCEEEEeccchHHHH---HHHHHHHHHHHHHhhcCCeEEEEEec
Confidence 9999987654421101 23457788888888888877544444
No 164
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=50.56 E-value=46 Score=29.95 Aligned_cols=52 Identities=10% Similarity=0.116 Sum_probs=33.1
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEM 233 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~ 233 (413)
.+.++.+++.|+.++-+.- .+ +..+.++.+|-+++++.+.+. .++|.+|+-.
T Consensus 26 ~~lv~~li~~Gv~gl~v~G-tt--GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~ 80 (292)
T 3daq_A 26 KAHVNFLLENNAQAIIVNG-TT--AESPTLTTDEKELILKTVIDLVDKRVPVIAGTGT 80 (292)
T ss_dssp HHHHHHHHHTTCCEEEESS-GG--GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HHHHHHHHHcCCCEEEECc-cc--cccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCc
Confidence 3455666778999885431 11 244567888877777766653 4678888643
No 165
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=50.08 E-value=61 Score=29.10 Aligned_cols=49 Identities=8% Similarity=0.110 Sum_probs=26.1
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEec
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHA 231 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~ 231 (413)
+.++.+++.|+.++-+.- .+ +..+..+.+|-+++++.+.+. .++|.+++
T Consensus 26 ~lv~~li~~Gv~gl~~~G-tt--GE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gv 77 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCG-TT--GEATTMTETERKETIKFVIDKVNKRIPVIAGT 77 (291)
T ss_dssp HHHHHHHHTTCCEEEESS-GG--GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC
T ss_pred HHHHHHHHcCCCEEEECc-cc--cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC
Confidence 344555667777764421 11 234456776666666655431 25566665
No 166
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=50.02 E-value=1e+02 Score=27.79 Aligned_cols=106 Identities=13% Similarity=0.215 Sum_probs=58.1
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCC-CCCcHHHHH----HHHHHHhc-CCeeeEEeeceec-CCchhhHHHHHHHHHc
Q 015110 116 EGFPSGTKAAAAGGITTLIDMPLNSDP-STISTETLK----LKVDAAEK-RIYVDVGFWGGLV-PENAYNASALEALLNA 188 (413)
Q Consensus 116 e~~~~~~~~al~~GvTTv~d~~~~~~~-~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~ 188 (413)
+.+....+..+.+|+..++-++ .+.. ...+.+.-. ...+...+ +.. ...+.. ....+.++..+...+.
T Consensus 28 ~~l~~lv~~li~~Gv~gl~v~G-ttGE~~~Ls~~Er~~v~~~~~~~~~g~rvp----viaGvg~~~t~~ai~la~~a~~~ 102 (301)
T 3m5v_A 28 QSYARLIKRQIENGIDAVVPVG-TTGESATLTHEEHRTCIEIAVETCKGTKVK----VLAGAGSNATHEAVGLAKFAKEH 102 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEECSS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCE----EEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEEECc-cccChhhCCHHHHHHHHHHHHHHhCCCCCe----EEEeCCCCCHHHHHHHHHHHHHc
Confidence 4455667778899999998776 3221 122332222 22233333 322 222222 2334556667777788
Q ss_pred CCcEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 189 G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
|++++-+.. + .+...+.+.+.+-++. |...++|+.+.-
T Consensus 103 Gadavlv~~-P----~y~~~s~~~l~~~f~~va~a~~lPiilYn 141 (301)
T 3m5v_A 103 GADGILSVA-P----YYNKPTQQGLYEHYKAIAQSVDIPVLLYN 141 (301)
T ss_dssp TCSEEEEEC-C----CSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCEEEEcC-C----CCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 999886542 1 1112366666666554 555799998873
No 167
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=50.00 E-value=1.2e+02 Score=27.22 Aligned_cols=108 Identities=15% Similarity=0.065 Sum_probs=57.2
Q ss_pred ccchHHHHHHHHh-CCceEEEeCCCCCCCCCCcHHHHH----HHHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHc
Q 015110 115 WEGFPSGTKAAAA-GGITTLIDMPLNSDPSTISTETLK----LKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNA 188 (413)
Q Consensus 115 ~e~~~~~~~~al~-~GvTTv~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~ 188 (413)
.+.+....+..+. +|+..++-++........+.+.-. ...+...++. ....+... ...+.++..+...+.
T Consensus 23 ~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grv----pviaGvg~~~t~~ai~la~~a~~~ 98 (293)
T 1f6k_A 23 EKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQI----ALIAQVGSVNLKEAVELGKYATEL 98 (293)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSS----EEEEECCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCC----eEEEecCCCCHHHHHHHHHHHHhc
Confidence 3445566777788 999999877521111222322222 2223333332 22222222 234455666666778
Q ss_pred CCcEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 189 G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
|++++-+.. + .+...+.+.+.+-++. |...++|+.++-
T Consensus 99 Gadavlv~~-P----~y~~~~~~~l~~~f~~va~a~~lPiilYn 137 (293)
T 1f6k_A 99 GYDCLSAVT-P----FYYKFSFPEIKHYYDTIIAETGSNMIVYS 137 (293)
T ss_dssp TCSEEEEEC-C----CSSCCCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCEEEECC-C----CCCCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 999886542 1 1112366666666544 555688998863
No 168
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=49.97 E-value=70 Score=28.76 Aligned_cols=49 Identities=10% Similarity=0.045 Sum_probs=28.6
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEec
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHA 231 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~ 231 (413)
+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+. .++|.+++
T Consensus 28 ~lv~~li~~Gv~gl~~~-Gtt--GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv 79 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLF-GTT--GEGCSVGSRERQAILSSFIAAGIAPSRIVTGV 79 (294)
T ss_dssp HHHHHHHHTTCSEEEES-STT--TTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred HHHHHHHHcCCCEEEEC-ccc--cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC
Confidence 44555667788887442 111 234567777777777776653 24555554
No 169
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=48.49 E-value=82 Score=28.25 Aligned_cols=107 Identities=17% Similarity=0.171 Sum_probs=56.7
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHH----HHHHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHcCC
Q 015110 116 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGV 190 (413)
Q Consensus 116 e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~G~ 190 (413)
+.+....+..+.+|+..++-++........+.+.- +...+...++..+- .+... ...+.++..+...+.|+
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi----aGvg~~~t~~ai~la~~A~~~Ga 96 (292)
T 2vc6_A 21 VALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVI----AGAGSNSTAEAIAFVRHAQNAGA 96 (292)
T ss_dssp HHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBE----EECCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE----EecCCccHHHHHHHHHHHHHcCC
Confidence 34556677778999999987752111112222222 22223333332221 22222 23345566666777899
Q ss_pred cEEEEeecCCCCCCCCCCCHHHHHHHHH-HHHhcCCCEEEec
Q 015110 191 LGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 231 (413)
Q Consensus 191 ~~ik~~~~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H~ 231 (413)
+++-+.. + .+...+.+.+.+-++ .|...++|+.++-
T Consensus 97 davlv~~-P----~y~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (292)
T 2vc6_A 97 DGVLIVS-P----YYNKPTQEGIYQHFKAIDAASTIPIIVYN 133 (292)
T ss_dssp SEEEEEC-C----CSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEEcC-C----CCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 9885532 1 111236676666554 4556789998863
No 170
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=48.15 E-value=58 Score=29.48 Aligned_cols=52 Identities=17% Similarity=0.170 Sum_probs=33.8
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEM 233 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~ 233 (413)
.+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+. .++|.+++-.
T Consensus 35 ~~lv~~li~~Gv~Gl~v~-GtT--GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~ 89 (303)
T 2wkj_A 35 RRLVQFNIQQGIDGLYVG-GST--GEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGC 89 (303)
T ss_dssp HHHHHHHHHTTCSEEEES-STT--TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCC
T ss_pred HHHHHHHHHcCCCEEEEC-eec--cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC
Confidence 345566677899987543 222 345677888887777776652 4678888743
No 171
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=47.68 E-value=89 Score=27.99 Aligned_cols=106 Identities=16% Similarity=0.208 Sum_probs=57.2
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCC-CCCcHHH----HHHHHHHHhcCCeeeEEeeceec-CCchhhHHHHHHHHHc
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDP-STISTET----LKLKVDAAEKRIYVDVGFWGGLV-PENAYNASALEALLNA 188 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~ 188 (413)
.+.+....+..+.+|+..++-++ .+.. ...+.+. ++...+...++..+ ..+.. ....+.++..+...+.
T Consensus 21 ~~~l~~lv~~li~~Gv~gl~~~G-ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pv----iaGvg~~~t~~ai~la~~a~~~ 95 (291)
T 3tak_A 21 WKSLEKLVEWHIEQGTNSIVAVG-TTGEASTLSMEEHTQVIKEIIRVANKRIPI----IAGTGANSTREAIELTKAAKDL 95 (291)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCE----EEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECc-cccccccCCHHHHHHHHHHHHHHhCCCCeE----EEeCCCCCHHHHHHHHHHHHhc
Confidence 34555667777899999998776 2221 1222222 22222333333222 11222 2234456666677778
Q ss_pred CCcEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEe
Q 015110 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVH 230 (413)
Q Consensus 189 G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H 230 (413)
|++++-+.. + .+...+.+.+.+-++. |...++|+.++
T Consensus 96 Gadavlv~~-P----~y~~~~~~~l~~~f~~ia~a~~lPiilY 133 (291)
T 3tak_A 96 GADAALLVT-P----YYNKPTQEGLYQHYKAIAEAVELPLILY 133 (291)
T ss_dssp TCSEEEEEC-C----CSSCCCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCEEEEcC-C----CCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999886532 1 1112356666665544 45579999887
No 172
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=47.40 E-value=1.1e+02 Score=28.06 Aligned_cols=108 Identities=13% Similarity=0.149 Sum_probs=57.8
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHH----HHHHHHHHhcCCeeeEEeeceec-CCchhhHHHHHHHHHcC
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTET----LKLKVDAAEKRIYVDVGFWGGLV-PENAYNASALEALLNAG 189 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~G 189 (413)
.+.+....+..+.+||..++-++........+.+. ++...+...++..+ ..+.. ....+.++..+...+.|
T Consensus 51 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpV----iaGvg~~st~eai~la~~A~~~G 126 (343)
T 2v9d_A 51 KPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPV----LIGTGGTNARETIELSQHAQQAG 126 (343)
T ss_dssp HHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCE----EEECCSSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcE----EEecCCCCHHHHHHHHHHHHhcC
Confidence 34455667777899999998776211112223222 22222333333222 12222 22344566666677789
Q ss_pred CcEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 190 VLGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 190 ~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
++++-+.. + .+...+.+.+.+-++. |...++|+.+.-
T Consensus 127 adavlv~~-P----~Y~~~s~~~l~~~f~~VA~a~~lPiilYn 164 (343)
T 2v9d_A 127 ADGIVVIN-P----YYWKVSEANLIRYFEQVADSVTLPVMLYN 164 (343)
T ss_dssp CSEEEEEC-C----SSSCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CCEEEECC-C----CCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99886542 1 1112366776666654 555789998863
No 173
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=47.14 E-value=88 Score=28.05 Aligned_cols=105 Identities=16% Similarity=0.190 Sum_probs=55.7
Q ss_pred chHHHHHHHHhCCceEEEeCCCCCCCCCCcHH----HHHHHHHHHhcCCeeeEEeeceec-CCchhhHHHHHHHHHcCCc
Q 015110 117 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTE----TLKLKVDAAEKRIYVDVGFWGGLV-PENAYNASALEALLNAGVL 191 (413)
Q Consensus 117 ~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~G~~ 191 (413)
.+....+..+.+|+..++-.+........+.+ .++...+...++..+ ..+.. ....+.++..+...+.|++
T Consensus 24 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpv----iaGvg~~~t~~ai~la~~a~~~Gad 99 (292)
T 3daq_A 24 ALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPV----IAGTGTNDTEKSIQASIQAKALGAD 99 (292)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCE----EEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcE----EEeCCcccHHHHHHHHHHHHHcCCC
Confidence 44556677789999999877621111122222 222223333333222 12222 2334456666677778999
Q ss_pred EEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEe
Q 015110 192 GLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVH 230 (413)
Q Consensus 192 ~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H 230 (413)
++-+.. + .+...+.+.+.+-++. |...++|+.+.
T Consensus 100 avlv~~-P----~y~~~~~~~l~~~f~~ia~a~~lPiilY 134 (292)
T 3daq_A 100 AIMLIT-P----YYNKTNQRGLVKHFEAIADAVKLPVVLY 134 (292)
T ss_dssp EEEEEC-C----CSSCCCHHHHHHHHHHHHHHHCSCEEEE
T ss_pred EEEECC-C----CCCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 886542 1 1112366666665544 44568999886
No 174
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=47.00 E-value=78 Score=28.50 Aligned_cols=107 Identities=12% Similarity=0.131 Sum_probs=56.7
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHH----HHHHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHcCC
Q 015110 116 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGV 190 (413)
Q Consensus 116 e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~G~ 190 (413)
+.+....+..+.+|+..++-++........+.+.- +...+...++..+ ..+... ...+.++..+...+.|+
T Consensus 21 ~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpv----iaGvg~~~t~~ai~la~~A~~~Ga 96 (297)
T 2rfg_A 21 KALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPV----IAGAGSNNPVEAVRYAQHAQQAGA 96 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCB----EEECCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeE----EEccCCCCHHHHHHHHHHHHhcCC
Confidence 34556667778999999987752111112222222 2222333333222 122222 23345566666677899
Q ss_pred cEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 191 LGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 191 ~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
+++-+.. + .+...+.+.+.+-++. |...++|+.+.-
T Consensus 97 davlv~~-P----~y~~~s~~~l~~~f~~va~a~~lPiilYn 133 (297)
T 2rfg_A 97 DAVLCVA-G----YYNRPSQEGLYQHFKMVHDAIDIPIIVYN 133 (297)
T ss_dssp SEEEECC-C----TTTCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEEcC-C----CCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9886532 1 1112366776666644 556789998863
No 175
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=46.98 E-value=94 Score=28.09 Aligned_cols=106 Identities=11% Similarity=0.152 Sum_probs=56.3
Q ss_pred chHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHH----HHHHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHcCCc
Q 015110 117 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGVL 191 (413)
Q Consensus 117 ~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~G~~ 191 (413)
.+....+..+.+|+..++-++........+.+.- +...+...++..+ ..+... ...+.++..+...+.|++
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpV----iaGvg~~st~~ai~la~~A~~~Gad 109 (306)
T 1o5k_A 34 SYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPV----IVGAGTNSTEKTLKLVKQAEKLGAN 109 (306)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCE----EEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeE----EEcCCCccHHHHHHHHHHHHhcCCC
Confidence 3445566778999999987752111112222222 2222333333222 122222 234456666666778999
Q ss_pred EEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 192 GLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 192 ~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
++-+.. + .+...+.+.+.+-++. |...++|+.+.-
T Consensus 110 avlv~~-P----~y~~~s~~~l~~~f~~va~a~~lPiilYn 145 (306)
T 1o5k_A 110 GVLVVT-P----YYNKPTQEGLYQHYKYISERTDLGIVVYN 145 (306)
T ss_dssp EEEEEC-C----CSSCCCHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred EEEECC-C----CCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 886532 1 1112366777766655 445689998863
No 176
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=46.86 E-value=1.1e+02 Score=27.74 Aligned_cols=107 Identities=16% Similarity=0.170 Sum_probs=57.8
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCC-CCCcHHH----HHHHHHHHhcCCeeeEEeeceec-CCchhhHHHHHHHHHc
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDP-STISTET----LKLKVDAAEKRIYVDVGFWGGLV-PENAYNASALEALLNA 188 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~ 188 (413)
.+.+....+..+.+||..++-++ .+.. ...+.+. ++...+...++..+- .+.. ....+.++..+...+.
T Consensus 42 ~~~l~~li~~li~~Gv~Gl~v~G-tTGE~~~Ls~~Er~~v~~~~v~~~~grvpVi----aGvg~~st~~ai~la~~A~~~ 116 (315)
T 3si9_A 42 EKAFCNFVEWQITQGINGVSPVG-TTGESPTLTHEEHKRIIELCVEQVAKRVPVV----AGAGSNSTSEAVELAKHAEKA 116 (315)
T ss_dssp HHHHHHHHHHHHHTTCSEEECSS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCBE----EECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEEeCc-cccCccccCHHHHHHHHHHHHHHhCCCCcEE----EeCCCCCHHHHHHHHHHHHhc
Confidence 34455667777899999998776 2221 1222222 222223333332221 1222 2234556667777788
Q ss_pred CCcEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 189 G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
|++++-+.. + .+...+.+.+.+-++. |...++|+.+.-
T Consensus 117 Gadavlv~~-P----~y~~~~~~~l~~~f~~va~a~~lPiilYn 155 (315)
T 3si9_A 117 GADAVLVVT-P----YYNRPNQRGLYTHFSSIAKAISIPIIIYN 155 (315)
T ss_dssp TCSEEEEEC-C----CSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCEEEECC-C----CCCCCCHHHHHHHHHHHHHcCCCCEEEEe
Confidence 999886532 1 1112356666665544 445789998873
No 177
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=46.13 E-value=58 Score=29.51 Aligned_cols=52 Identities=21% Similarity=0.209 Sum_probs=32.6
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEM 233 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~ 233 (413)
.+.++.+++.|+.++-+.-+ + +..+.++.+|-+++++.+.+. .++|.+++-.
T Consensus 36 ~~lv~~li~~Gv~gl~v~Gt-T--GE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~ 90 (306)
T 1o5k_A 36 ERLVRYQLENGVNALIVLGT-T--GESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGT 90 (306)
T ss_dssp HHHHHHHHHTTCCEEEESSG-G--GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HHHHHHHHHcCCCEEEeCcc-c--cchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCC
Confidence 34556667789988754311 1 234567888877777776642 3677777643
No 178
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=46.00 E-value=62 Score=29.51 Aligned_cols=51 Identities=10% Similarity=0.115 Sum_probs=31.5
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAE 232 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e 232 (413)
.+.++.+++.|+.++-+.- .+ +..+.++.+|-.++++.+.+. .++|.+++-
T Consensus 35 ~~lv~~li~~Gv~gl~v~G-tT--GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg 88 (318)
T 3qfe_A 35 ERYYAYLARSGLTGLVILG-TN--AEAFLLTREERAQLIATARKAVGPDFPIMAGVG 88 (318)
T ss_dssp HHHHHHHHTTTCSEEEESS-GG--GTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECC
T ss_pred HHHHHHHHHcCCCEEEeCc-cc--cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC
Confidence 3455566678988875431 11 234567888777777766552 356777763
No 179
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=45.95 E-value=62 Score=29.94 Aligned_cols=50 Identities=18% Similarity=0.285 Sum_probs=30.9
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE 232 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e 232 (413)
+.++.+++.|+.++-+.-+ + +..+.++.+|-+++++.+..-.++|.+++-
T Consensus 51 ~lv~~li~~Gv~Gl~v~Gt-T--GE~~~Ls~eEr~~vi~~~~~grvpViaGvg 100 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGS-M--GDWPLLTDEQRMEGVERLVKAGIPVIVGTG 100 (344)
T ss_dssp HHHHHHHHTTCCCEEESSG-G--GTGGGSCHHHHHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHcCCCEEEeCcc-C--cChhhCCHHHHHHHHHHHhCCCCcEEEecC
Confidence 4555667788888754311 1 234567888888887763334566777763
No 180
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=45.88 E-value=82 Score=29.33 Aligned_cols=49 Identities=4% Similarity=-0.039 Sum_probs=27.1
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEec
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHA 231 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~ 231 (413)
+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+. .++|.+++
T Consensus 84 ~lv~~li~~Gv~Gl~v~-GTT--GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv 135 (360)
T 4dpp_A 84 DLVNIQIQNGAEGVIVG-GTT--GEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNT 135 (360)
T ss_dssp HHHHHHHHTTCCEEEES-STT--TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC
T ss_pred HHHHHHHHcCCCEEEec-ccc--cChhhCCHHHHHHHHHHHHHHhCCCCeEEEec
Confidence 44555567788877442 111 234566777766666655432 24566665
No 181
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=45.86 E-value=66 Score=28.82 Aligned_cols=52 Identities=13% Similarity=0.236 Sum_probs=32.9
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEM 233 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~ 233 (413)
.+.++.+++.|+.++-+. +.+ +..+..+.+|-+++++.+.+. .++|.+++-.
T Consensus 24 ~~lv~~li~~Gv~gl~~~-Gtt--GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~ 78 (289)
T 2yxg_A 24 EENINFLIENGVSGIVAV-GTT--GESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGS 78 (289)
T ss_dssp HHHHHHHHHTTCSEEEES-STT--TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC
T ss_pred HHHHHHHHHCCCCEEEEC-ccc--cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC
Confidence 345566677899887542 222 345667888877777766642 3677777643
No 182
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=45.78 E-value=1.5e+02 Score=25.80 Aligned_cols=108 Identities=18% Similarity=0.162 Sum_probs=59.0
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEE-EecCChhhchhhHhhccCcCCccccccCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLL-VHAEMEKGSERHVKLEDDTLDTRSYSTYL 257 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~-~H~e~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (413)
.+.++.+.+.|..++.+.... ..+.+.++.+.++++|+.+. +|....... .
T Consensus 41 ~~~l~~~~~~G~~~vEl~~~~---------~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l-------------------~ 92 (287)
T 3kws_A 41 NEKLDFMEKLGVVGFEPGGGG---------LAGRVNEIKQALNGRNIKVSAICAGFKGFI-------------------L 92 (287)
T ss_dssp HHHHHHHHHTTCCEEECBSTT---------CGGGHHHHHHHHTTSSCEECEEECCCCSCT-------------------T
T ss_pred HHHHHHHHHcCCCEEEecCCc---------hHHHHHHHHHHHHHcCCeEEEEecCCCCcC-------------------C
Confidence 456667777888888765321 12356667777788888875 444211000 0
Q ss_pred CCCchH--HHHHHHHHHHHHHhhcccCCCCCCceEEEEccC---------Chhh-------HH-HHHHHHHHCCCCEEEE
Q 015110 258 KTRPPS--WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS---------DASS-------SL-DLLMEAKTNGDSITVE 318 (413)
Q Consensus 258 ~~~p~~--~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s---------~~~~-------~~-~~i~~ak~~G~~v~~e 318 (413)
...|.. .....+.+.+++++.. |++..+.|.. ..++ .+ ++.+.+++.|+.+..|
T Consensus 93 ~~d~~~r~~~~~~~~~~i~~a~~l-------Ga~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE 165 (287)
T 3kws_A 93 STDPAIRKECMDTMKEIIAAAGEL-------GSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFE 165 (287)
T ss_dssp BSSHHHHHHHHHHHHHHHHHHHHT-------TCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHc-------CCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 001111 1134567777777764 6776666643 1101 11 3344567788888877
Q ss_pred ccc
Q 015110 319 TCP 321 (413)
Q Consensus 319 ~~p 321 (413)
..+
T Consensus 166 ~~~ 168 (287)
T 3kws_A 166 PLN 168 (287)
T ss_dssp CCC
T ss_pred ecC
Confidence 654
No 183
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=45.43 E-value=94 Score=28.26 Aligned_cols=107 Identities=8% Similarity=0.106 Sum_probs=57.4
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHH----HHHHHHHHhcCCeeeEEeeceec-CCchhhHHHHHHHHHcCC
Q 015110 116 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTET----LKLKVDAAEKRIYVDVGFWGGLV-PENAYNASALEALLNAGV 190 (413)
Q Consensus 116 e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~G~ 190 (413)
+.+....+..+.+|+..++-++........+.+. ++...+...++..+-. +.. ....+.++..+...+.|+
T Consensus 45 ~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia----Gvg~~~t~~ai~la~~A~~~Ga 120 (315)
T 3na8_A 45 PALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV----SVSDLTTAKTVRRAQFAESLGA 120 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE----ECCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE----ecCCCCHHHHHHHHHHHHhcCC
Confidence 4455667777899999998775211111222222 2222233333322212 222 223455666777778899
Q ss_pred cEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 191 LGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 191 ~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
+++-+.. + .+...+.+.+.+-++. |...++|+.+.-
T Consensus 121 davlv~~-P----~y~~~s~~~l~~~f~~va~a~~lPiilYn 157 (315)
T 3na8_A 121 EAVMVLP-I----SYWKLNEAEVFQHYRAVGEAIGVPVMLYN 157 (315)
T ss_dssp SEEEECC-C----CSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEECC-C----CCCCCCHHHHHHHHHHHHHhCCCcEEEEe
Confidence 9986532 1 1112366666666544 455789998873
No 184
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=45.27 E-value=94 Score=27.84 Aligned_cols=52 Identities=8% Similarity=0.146 Sum_probs=33.9
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEM 233 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~ 233 (413)
.+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+. .++|.+|+-.
T Consensus 25 ~~lv~~li~~Gv~gl~~~-Gtt--GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~ 79 (291)
T 3tak_A 25 EKLVEWHIEQGTNSIVAV-GTT--GEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGA 79 (291)
T ss_dssp HHHHHHHHHHTCCEEEES-STT--TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HHHHHHHHHCCCCEEEEC-ccc--cccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence 345566677899988442 222 345667888888887776652 4688888743
No 185
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=45.03 E-value=1.5e+02 Score=25.66 Aligned_cols=48 Identities=6% Similarity=-0.033 Sum_probs=34.3
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 231 (413)
.+.++.+.+.|..++.+..... ....+..+.++.+.++++|+.+..|.
T Consensus 20 ~~~l~~~~~~G~~~vEl~~~~~-----~~~~~~~~~~~~~~l~~~gl~~~~~~ 67 (290)
T 2qul_A 20 PATAKRIAGLGFDLMEISLGEF-----HNLSDAKKRELKAVADDLGLTVMCCI 67 (290)
T ss_dssp HHHHHHHHHTTCSEEEEESTTG-----GGSCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEEecCCc-----cccchhhHHHHHHHHHHcCCceEEec
Confidence 4556777778999998764321 11234678888889999999998875
No 186
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=44.64 E-value=96 Score=27.10 Aligned_cols=74 Identities=12% Similarity=0.120 Sum_probs=49.5
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCCCC
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKT 259 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (413)
..+.-+.+.|..++|.|.-. .....+|++.+.+.|.+.|. .+-.-.- + +
T Consensus 172 tAiaml~dmG~~SvKffPM~------Gl~~leEl~avAkAca~~g~--~lEPTGG--I--------------d------- 220 (275)
T 3m6y_A 172 TAIALVRDMGGNSLKYFPMK------GLAHEEEYRAVAKACAEEGF--ALEPTGG--I--------------D------- 220 (275)
T ss_dssp HHHHHHHHHTCCEEEECCCT------TTTTHHHHHHHHHHHHHHTC--EEEEBSS--C--------------C-------
T ss_pred HHHHHHHHcCCCeeeEeecC------CcccHHHHHHHHHHHHHcCc--eECCCCC--c--------------c-------
Confidence 45566667899999987322 13578999999999999998 3332110 0 0
Q ss_pred CchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCC
Q 015110 260 RPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD 297 (413)
Q Consensus 260 ~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~ 297 (413)
.+.+..+++.+.+. |++..|-|+-+
T Consensus 221 ------l~Nf~~I~~i~l~a-------Gv~~viPHIYs 245 (275)
T 3m6y_A 221 ------KENFETIVRIALEA-------NVEQVIPHVYS 245 (275)
T ss_dssp ------TTTHHHHHHHHHHT-------TCSCBCCEECG
T ss_pred ------HhHHHHHHHHHHHc-------CCCeecccccc
Confidence 12356667777764 88888888753
No 187
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=44.56 E-value=53 Score=29.54 Aligned_cols=52 Identities=15% Similarity=0.259 Sum_probs=32.3
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEM 233 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~ 233 (413)
.+.++.+++.|+.++-+. +.+ +..+..+.+|-+++++.+.+. .++|.+++-.
T Consensus 24 ~~lv~~li~~Gv~gl~~~-Gtt--GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~ 78 (292)
T 2vc6_A 24 HDLVEWQIEEGSFGLVPC-GTT--GESPTLSKSEHEQVVEITIKTANGRVPVIAGAGS 78 (292)
T ss_dssp HHHHHHHHHTTCSEEETT-SGG--GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC
T ss_pred HHHHHHHHHcCCCEEEEC-ccc--cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC
Confidence 345566677899887432 111 244567888877777776652 3677777643
No 188
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=44.23 E-value=87 Score=28.29 Aligned_cols=52 Identities=17% Similarity=0.157 Sum_probs=33.1
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEM 233 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~ 233 (413)
.+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+. .++|.+++-.
T Consensus 40 ~~lv~~li~~Gv~gl~v~-Gtt--GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~ 94 (304)
T 3cpr_A 40 REVAAYLVDKGLDSLVLA-GTT--GESPTTTAAEKLELLKAVREEVGDRAKLIAGVGT 94 (304)
T ss_dssp HHHHHHHHHTTCCEEEES-STT--TTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCC
T ss_pred HHHHHHHHHcCCCEEEEC-ccc--cChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCC
Confidence 345566677899887543 211 345677888877777776642 3677777643
No 189
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=44.21 E-value=68 Score=29.46 Aligned_cols=51 Identities=12% Similarity=0.129 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAE 232 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e 232 (413)
.+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+. .++|.+++-
T Consensus 58 ~~lv~~li~~Gv~Gl~v~-GtT--GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg 111 (332)
T 2r8w_A 58 SALIARLDAAEVDSVGIL-GST--GIYMYLTREERRRAIEAAATILRGRRTLMAGIG 111 (332)
T ss_dssp HHHHHHHHHHTCSEEEES-STT--TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEC-ccc--cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC
Confidence 345556677899887543 211 345567888877777766642 356777753
No 190
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=44.12 E-value=1.8e+02 Score=26.23 Aligned_cols=108 Identities=8% Similarity=0.130 Sum_probs=57.2
Q ss_pred CccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHH----hcCCeeeEEeeceecC-CchhhHHHHHHHHHc
Q 015110 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAA----EKRIYVDVGFWGGLVP-ENAYNASALEALLNA 188 (413)
Q Consensus 114 ~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~ 188 (413)
+.+.+....+..+.+|+..++-++........+.+.-.+..+.. .++..+ ..+... ...+.++..+...+.
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpV----iaGvg~~~t~~ai~la~~A~~~ 101 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPL----IAGVGTNDTRDSIEFVKEVAEF 101 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCE----EEECCCSSHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcE----EEeCCCcCHHHHHHHHHHHHhc
Confidence 44566677788899999998877622111222333222222222 222222 222222 233455566666667
Q ss_pred CC-cEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEe
Q 015110 189 GV-LGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVH 230 (413)
Q Consensus 189 G~-~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H 230 (413)
|+ +++-+.. + .+...+.+.+.+-++. |...++|+.+.
T Consensus 102 Ga~davlv~~-P----~y~~~s~~~l~~~f~~va~a~~lPiilY 140 (311)
T 3h5d_A 102 GGFAAGLAIV-P----YYNKPSQEGMYQHFKAIADASDLPIIIY 140 (311)
T ss_dssp CCCSEEEEEC-C----CSSCCCHHHHHHHHHHHHHSCSSCEEEE
T ss_pred CCCcEEEEcC-C----CCCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 86 8875531 1 1112366666666654 44578999887
No 191
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=44.10 E-value=68 Score=29.63 Aligned_cols=52 Identities=23% Similarity=0.277 Sum_probs=33.2
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEM 233 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~ 233 (413)
.+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+. .++|.+++-.
T Consensus 55 ~~lv~~li~~Gv~Gl~v~-GtT--GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~ 109 (343)
T 2v9d_A 55 AALIDDLIKAGVDGLFFL-GSG--GEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGG 109 (343)
T ss_dssp HHHHHHHHHTTCSCEEES-STT--TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCS
T ss_pred HHHHHHHHHcCCCEEEeC-ccc--cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC
Confidence 345566677899887543 211 345667888877777766642 4678888743
No 192
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=44.02 E-value=13 Score=32.78 Aligned_cols=36 Identities=19% Similarity=0.154 Sum_probs=25.9
Q ss_pred eeecccccCCCCCCCccchHHHHHHHHhCCceEEEeC
Q 015110 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDM 136 (413)
Q Consensus 100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d~ 136 (413)
++|.|+|...+. ....+.....+.|.+.|++.+.--
T Consensus 1 ~~DlH~Ht~~S~-DG~~~~ee~v~~A~~~Gl~~iaiT 36 (267)
T 2yxo_A 1 MVDSHVHTPLCG-HAEGHPEAYLEEARAKGLKGVVFT 36 (267)
T ss_dssp CEEEEECCGGGS-SCCSCHHHHHHHHHHTTCSEEEEE
T ss_pred CCccCcCcCCCC-CCCCCHHHHHHHHHHcCCCEEEEc
Confidence 589999986542 223455677889999999987643
No 193
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=43.73 E-value=1e+02 Score=27.61 Aligned_cols=107 Identities=14% Similarity=0.226 Sum_probs=56.4
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCC-CCCcHHHH----HHHHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHc
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDP-STISTETL----KLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNA 188 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~ 188 (413)
.+.+....+..+.+|+..++-++ .+.. ...+.+.- +...+...++..+ ..+... ...+.++..+...+.
T Consensus 21 ~~~l~~lv~~li~~Gv~gl~~~G-ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pv----iaGvg~~~t~~ai~la~~a~~~ 95 (292)
T 2ojp_A 21 RASLKKLIDYHVASGTSAIVSVG-TTGESATLNHDEHADVVMMTLDLADGRIPV----IAGTGANATAEAISLTQRFNDS 95 (292)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCE----EEECCCSSHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHcCCCEEEECc-cccchhhCCHHHHHHHHHHHHHHhCCCCcE----EEecCCccHHHHHHHHHHHHhc
Confidence 34455667777899999998776 2221 12232222 2222333333222 122222 223445555555567
Q ss_pred CCcEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 189 G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
|++++-+.. + .+...+.+.+.+-++. |...++|+.+.-
T Consensus 96 Gadavlv~~-P----~y~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (292)
T 2ojp_A 96 GIVGCLTVT-P----YYNRPSQEGLYQHFKAIAEHTDLPQILYN 134 (292)
T ss_dssp SCSEEEEEC-C----CSSCCCHHHHHHHHHHHHTTCSSCEEEEC
T ss_pred CCCEEEECC-C----CCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999885532 1 1112367777766655 445689998863
No 194
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=43.54 E-value=1.7e+02 Score=25.59 Aligned_cols=49 Identities=20% Similarity=0.163 Sum_probs=37.0
Q ss_pred hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEE-ec
Q 015110 178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV-HA 231 (413)
Q Consensus 178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~-H~ 231 (413)
..+.++.+.+.|..++.+.... .+..+.+.+.++.+.++++|+.+.. |.
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~-----~~~~~~~~~~~~~~~l~~~gl~i~~~~~ 68 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASP-----LPFYSDIQINELKACAHGNGITLTVGHG 68 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTT-----GGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEecCcc-----cCCcCHHHHHHHHHHHHHcCCeEEEeec
Confidence 3456777778899999876421 2335788899999999999999887 54
No 195
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=43.38 E-value=1.3e+02 Score=27.22 Aligned_cols=52 Identities=15% Similarity=0.188 Sum_probs=35.7
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEM 233 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~ 233 (413)
.+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+. .++|.+++-.
T Consensus 31 ~~lv~~li~~Gv~Gl~v~-GtT--GE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~ 85 (311)
T 3h5d_A 31 PALIEHLLAHHTDGILLA-GTT--AESPTLTHDEELELFAAVQKVVNGRVPLIAGVGT 85 (311)
T ss_dssp HHHHHHHHHTTCCCEEES-STT--TTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCC
T ss_pred HHHHHHHHHcCCCEEEEC-ccc--cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC
Confidence 456667778999987543 222 345678888888888887764 3688888743
No 196
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=43.18 E-value=1e+02 Score=27.93 Aligned_cols=108 Identities=14% Similarity=0.207 Sum_probs=57.8
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHH----HHHHHHHHhcCCeeeEEeeceec-CCchhhHHHHHHHHHcC
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTET----LKLKVDAAEKRIYVDVGFWGGLV-PENAYNASALEALLNAG 189 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~G 189 (413)
.+.+....+..+.+||..++-++........+.+. ++...+...++..+ ..+.. ....+.++..+...+.|
T Consensus 43 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpV----iaGvg~~st~eai~la~~A~~~G 118 (314)
T 3qze_A 43 WDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPV----IAGTGANSTREAVALTEAAKSGG 118 (314)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCE----EEECCCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcE----EEeCCCcCHHHHHHHHHHHHHcC
Confidence 34455666777899999998875211111222222 22223333333222 11222 22345566677777889
Q ss_pred CcEEEEeecCCCCCCCCCCCHHHHHHHHH-HHHhcCCCEEEec
Q 015110 190 VLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 231 (413)
Q Consensus 190 ~~~ik~~~~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H~ 231 (413)
++++-+.. + .+...+.+.+.+-++ .|...++|+.+.-
T Consensus 119 adavlv~~-P----~y~~~s~~~l~~~f~~va~a~~lPiilYn 156 (314)
T 3qze_A 119 ADACLLVT-P----YYNKPTQEGMYQHFRHIAEAVAIPQILYN 156 (314)
T ss_dssp CSEEEEEC-C----CSSCCCHHHHHHHHHHHHHHSCSCEEEEE
T ss_pred CCEEEEcC-C----CCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99886532 1 111235666666554 4455799999873
No 197
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=43.09 E-value=93 Score=26.87 Aligned_cols=22 Identities=5% Similarity=-0.022 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHhcCCCE-EEec
Q 015110 210 ASHIKEGLSVLARYKRPL-LVHA 231 (413)
Q Consensus 210 ~~~l~~~~~~A~~~g~~v-~~H~ 231 (413)
.+.+++.++.|+++|.+. .+|.
T Consensus 83 ~~~~~~~i~~a~~lG~~~v~~~~ 105 (278)
T 1i60_A 83 ITEFKGMMETCKTLGVKYVVAVP 105 (278)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEec
Confidence 346777888888888764 3454
No 198
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=43.00 E-value=1.3e+02 Score=25.72 Aligned_cols=35 Identities=14% Similarity=0.135 Sum_probs=23.5
Q ss_pred CceEEEEccCChhhHHHHHHHHHHCCCCEEEEcccc
Q 015110 287 GAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPH 322 (413)
Q Consensus 287 g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~ 322 (413)
++.+|..|..+. ...+.++..++.|..+-..++|+
T Consensus 88 gv~vh~e~~~~~-~~~~~~~~i~~~g~~~gv~~~p~ 122 (230)
T 1tqj_A 88 IISVHVEHNASP-HLHRTLCQIRELGKKAGAVLNPS 122 (230)
T ss_dssp EEEEECSTTTCT-THHHHHHHHHHTTCEEEEEECTT
T ss_pred EEEECcccccch-hHHHHHHHHHHcCCcEEEEEeCC
Confidence 344444433343 56788899999999888777775
No 199
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=42.78 E-value=2.1e+02 Score=26.53 Aligned_cols=94 Identities=16% Similarity=0.162 Sum_probs=53.8
Q ss_pred HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHHcCCcEEEEeec
Q 015110 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMC 198 (413)
Q Consensus 119 ~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~ 198 (413)
....+...+.|.--++-. .|.....+.+....+...-....|+.| + .....+.++.|++.+.+-
T Consensus 49 v~Qi~~l~~aG~diVRva----vp~~~~a~al~~I~~~~~vPlvaDiHf-------~---~~lal~a~e~G~dklRIN-- 112 (366)
T 3noy_A 49 LNQIKRLYEAGCEIVRVA----VPHKEDVEALEEIVKKSPMPVIADIHF-------A---PSYAFLSMEKGVHGIRIN-- 112 (366)
T ss_dssp HHHHHHHHHTTCCEEEEE----CCSHHHHHHHHHHHHHCSSCEEEECCS-------C---HHHHHHHHHTTCSEEEEC--
T ss_pred HHHHHHHHHcCCCEEEeC----CCChHHHHHHHHHHhcCCCCEEEeCCC-------C---HHHHHHHHHhCCCeEEEC--
Confidence 344566678898777632 232223344444433321111122222 1 234445678899887663
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 199 PSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 199 ~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
|.. .-+++.++++++.|+++|+++-+=+..
T Consensus 113 PGN-----ig~~~~~~~vv~~ak~~~~piRIGvN~ 142 (366)
T 3noy_A 113 PGN-----IGKEEIVREIVEEAKRRGVAVRIGVNS 142 (366)
T ss_dssp HHH-----HSCHHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred Ccc-----cCchhHHHHHHHHHHHcCCCEEEecCC
Confidence 321 225788999999999999998886533
No 200
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=42.61 E-value=87 Score=28.04 Aligned_cols=109 Identities=16% Similarity=0.199 Sum_probs=58.0
Q ss_pred CccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHH----HHHHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHc
Q 015110 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNA 188 (413)
Q Consensus 114 ~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~ 188 (413)
+.+.+....+..+.+|+..++-++........+.+.- +...+...++..+ ..+... ...+.++..+...+.
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pv----i~Gvg~~~t~~ai~la~~a~~~ 95 (291)
T 3a5f_A 20 DFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPV----IAGTGSNNTAASIAMSKWAESI 95 (291)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCE----EEECCCSSHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcE----EEeCCcccHHHHHHHHHHHHhc
Confidence 3445566677788999999987752111112222222 2222333333222 222222 234456666677778
Q ss_pred CCcEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 189 G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
|++++-+.. + .+...+.+.+.+-++. |...++|+.++-
T Consensus 96 Gadavlv~~-P----~y~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3a5f_A 96 GVDGLLVIT-P----YYNKTTQKGLVKHFKAVSDAVSTPIIIYN 134 (291)
T ss_dssp TCSEEEEEC-C----CSSCCCHHHHHHHC-CTGGGCCSCEEEEE
T ss_pred CCCEEEEcC-C----CCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999886542 1 1112367777766654 455789988863
No 201
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=41.96 E-value=1.7e+02 Score=27.10 Aligned_cols=105 Identities=13% Similarity=0.114 Sum_probs=57.1
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCC-CCCcHHH----HHHHHHHHhcCCeeeEEeeceec-CCchhhHHHHHHHHHc
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDP-STISTET----LKLKVDAAEKRIYVDVGFWGGLV-PENAYNASALEALLNA 188 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~ 188 (413)
.+.+....+..+.+||..++-++ .+.. ...+.+. ++...+...++..+ ..+.. ....+.++..+...+.
T Consensus 79 ~~al~~lv~~li~~Gv~Gl~v~G-TTGE~~~Ls~eEr~~vi~~~ve~~~grvpV----iaGvg~~st~eai~la~~A~~~ 153 (360)
T 4dpp_A 79 LEAYDDLVNIQIQNGAEGVIVGG-TTGEGQLMSWDEHIMLIGHTVNCFGGSIKV----IGNTGSNSTREAIHATEQGFAV 153 (360)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTTSEE----EEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEEecc-cccChhhCCHHHHHHHHHHHHHHhCCCCeE----EEecCCCCHHHHHHHHHHHHHc
Confidence 34455667777899999998876 3221 1222222 22222333333222 22222 2234456666677778
Q ss_pred CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEe
Q 015110 189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVH 230 (413)
Q Consensus 189 G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 230 (413)
|++++-+.. + .+...+.+.+.+-++...+. +|+.+.
T Consensus 154 Gadavlvv~-P----yY~k~sq~gl~~hf~~IA~a-~PiilY 189 (360)
T 4dpp_A 154 GMHAALHIN-P----YYGKTSIEGLIAHFQSVLHM-GPTIIY 189 (360)
T ss_dssp TCSEEEEEC-C----CSSCCCHHHHHHHHHTTGGG-SCEEEE
T ss_pred CCCEEEEcC-C----CCCCCCHHHHHHHHHHHHHh-CCEEEE
Confidence 999886532 1 11224777777777766654 687775
No 202
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=41.82 E-value=1.2e+02 Score=27.02 Aligned_cols=51 Identities=14% Similarity=0.045 Sum_probs=32.3
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE 232 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e 232 (413)
.+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+.-..|.+++-
T Consensus 22 ~~lv~~li~~Gv~gl~v~-Gtt--GE~~~Ls~~Er~~v~~~~~~~~~gvi~Gvg 72 (286)
T 2r91_A 22 ANHVKNITSKGVDVVFVA-GTT--GLGPALSLQEKMELTDAATSAARRVIVQVA 72 (286)
T ss_dssp HHHHHHHHHTTCCEEEET-STT--TTGGGSCHHHHHHHHHHHHHHCSSEEEECC
T ss_pred HHHHHHHHHCCCCEEEEC-ccc--cChhhCCHHHHHHHHHHHHHHhCCEEEeeC
Confidence 345566677899887542 211 345677888888888877754222667763
No 203
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=41.82 E-value=75 Score=28.54 Aligned_cols=51 Identities=6% Similarity=0.101 Sum_probs=31.5
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAE 232 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e 232 (413)
.+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+. .++|.+++-
T Consensus 24 ~~lv~~li~~Gv~gl~~~-Gtt--GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg 77 (294)
T 2ehh_A 24 GNLIEFHVDNGTDAILVC-GTT--GESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG 77 (294)
T ss_dssp HHHHHHHHTTTCCEEEES-STT--TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC
T ss_pred HHHHHHHHHCCCCEEEEC-ccc--cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC
Confidence 345556677888887542 211 345567888777777766642 366777764
No 204
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=41.27 E-value=78 Score=28.42 Aligned_cols=52 Identities=13% Similarity=0.061 Sum_probs=33.9
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
.+.++.+++.|+.++-+. +.+ +..+.++.+|-.++++.+.+.-..|.+++-.
T Consensus 23 ~~lv~~li~~Gv~gl~~~-Gtt--GE~~~Ls~eEr~~v~~~~~~~~~gviaGvg~ 74 (293)
T 1w3i_A 23 KIHAENLIRKGIDKLFVN-GTT--GLGPSLSPEEKLENLKAVYDVTNKIIFQVGG 74 (293)
T ss_dssp HHHHHHHHHTTCCEEEES-STT--TTGGGSCHHHHHHHHHHHHTTCSCEEEECCC
T ss_pred HHHHHHHHHcCCCEEEEC-ccc--cChhhCCHHHHHHHHHHHHHHcCCEEEecCC
Confidence 345566677899887542 222 3456789999889998888642227777643
No 205
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=41.18 E-value=1e+02 Score=27.61 Aligned_cols=51 Identities=14% Similarity=0.156 Sum_probs=33.0
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE 232 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e 232 (413)
.+.++.+++.|+.++-+. +.+ +..+.++.+|-.++++.+.+.-..|.+++-
T Consensus 23 ~~lv~~li~~Gv~gl~v~-GtT--GE~~~Ls~eEr~~v~~~~~~~~~gViaGvg 73 (288)
T 2nuw_A 23 KTHAKNLLEKGIDAIFVN-GTT--GLGPALSKDEKRQNLNALYDVTHKLIFQVG 73 (288)
T ss_dssp HHHHHHHHHTTCCEEEET-STT--TTGGGSCHHHHHHHHHHHTTTCSCEEEECC
T ss_pred HHHHHHHHHcCCCEEEEC-ccc--cChhhCCHHHHHHHHHHHHHHhCCeEEeeC
Confidence 345566677899887542 211 345678888888888888764222667764
No 206
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=41.00 E-value=1.7e+02 Score=25.01 Aligned_cols=105 Identities=11% Similarity=-0.013 Sum_probs=59.1
Q ss_pred chHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHHcCCcEEEEe
Q 015110 117 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSF 196 (413)
Q Consensus 117 ~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~ 196 (413)
++....+.+.+.|+..+--... ..+...+.+.++...+.......--...............+.++...+-|+..+.+.
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDF-HLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTT-TSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHhCCCEEEEecc-cCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEec
Confidence 4566778888999998865542 112233455555555554433221111111111111112233444445688777653
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 197 MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 197 ~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
. ..+.++++.+.|+++|+.+.+|..+
T Consensus 110 p-----------~~~~l~~l~~~a~~~gv~l~lEn~~ 135 (257)
T 3lmz_A 110 P-----------NYELLPYVDKKVKEYDFHYAIHLHG 135 (257)
T ss_dssp E-----------CGGGHHHHHHHHHHHTCEEEEECCC
T ss_pred C-----------CHHHHHHHHHHHHHcCCEEEEecCC
Confidence 1 1367889999999999999999764
No 207
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=40.46 E-value=1.4e+02 Score=27.01 Aligned_cols=107 Identities=12% Similarity=0.014 Sum_probs=57.9
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHH----HHHHHHHHhcCCeeeEEeeceec-CCchhhHHHHHHHHHcC
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTET----LKLKVDAAEKRIYVDVGFWGGLV-PENAYNASALEALLNAG 189 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~G 189 (413)
.+.+....+..+.+|+..++-++........+.+. ++...+...++..+- .+.. ....+.++..+...+.|
T Consensus 28 ~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvi----aGvg~~~t~~ai~la~~A~~~G 103 (309)
T 3fkr_A 28 LASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVI----VTTSHYSTQVCAARSLRAQQLG 103 (309)
T ss_dssp HHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEE----EECCCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEE----EecCCchHHHHHHHHHHHHHcC
Confidence 34556667778899999988876211112222222 222223333332221 2222 22344566667777889
Q ss_pred CcEEEEeecCCCCCCC---CCCCHHHHHHHHHH-HHhcCCCEEEe
Q 015110 190 VLGLKSFMCPSGINDF---PMTNASHIKEGLSV-LARYKRPLLVH 230 (413)
Q Consensus 190 ~~~ik~~~~~~~~~~~---~~~~~~~l~~~~~~-A~~~g~~v~~H 230 (413)
++++-+.. + .+ ...+.+.+.+-++. |...++|+.+.
T Consensus 104 adavlv~~-P----yy~~~~~~s~~~l~~~f~~va~a~~lPiilY 143 (309)
T 3fkr_A 104 AAMVMAMP-P----YHGATFRVPEAQIFEFYARVSDAIAIPIMVQ 143 (309)
T ss_dssp CSEEEECC-S----CBTTTBCCCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCEEEEcC-C----CCccCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99986532 1 11 12366766666554 45578999886
No 208
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=40.38 E-value=78 Score=27.45 Aligned_cols=94 Identities=17% Similarity=0.115 Sum_probs=54.7
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHHcCCcEEEE
Q 015110 116 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKS 195 (413)
Q Consensus 116 e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~ 195 (413)
+.....+++++.+|++.+.--. ++ | ...+.++...+.. ....+..+ . .. ..+.++..++.|+..+-.
T Consensus 46 ~~a~~~a~al~~gGi~~iEvt~-~t-~--~a~e~I~~l~~~~-~~~~iGaG---T-Vl----t~~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 46 EDIIPLGKVLAENGLPAAEITF-RS-D--AAVEAIRLLRQAQ-PEMLIGAG---T-IL----NGEQALAAKEAGATFVVS 112 (232)
T ss_dssp GGHHHHHHHHHHTTCCEEEEET-TS-T--THHHHHHHHHHHC-TTCEEEEE---C-CC----SHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHHHHHCCCCEEEEeC-CC-C--CHHHHHHHHHHhC-CCCEEeEC---C-cC----CHHHHHHHHHcCCCEEEe
Confidence 4455667888999999886421 22 1 2345555544332 12222211 1 11 256788888999987732
Q ss_pred eecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhh
Q 015110 196 FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG 236 (413)
Q Consensus 196 ~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~ 236 (413)
|..+.+ +++.++++|+++..=+.+..+
T Consensus 113 ----------P~~~~~----vi~~~~~~gi~~ipGv~TptE 139 (232)
T 4e38_A 113 ----------PGFNPN----TVRACQEIGIDIVPGVNNPST 139 (232)
T ss_dssp ----------SSCCHH----HHHHHHHHTCEEECEECSHHH
T ss_pred ----------CCCCHH----HHHHHHHcCCCEEcCCCCHHH
Confidence 334544 455677889998776666554
No 209
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=39.79 E-value=1.8e+02 Score=24.89 Aligned_cols=105 Identities=10% Similarity=-0.035 Sum_probs=59.1
Q ss_pred chHHHHHHHHhCCceEEEeCCCCCC---------CCCCcHHHHHHHHHHHhcCCeeeEEeeceec-CCchhhHHHHHHHH
Q 015110 117 GFPSGTKAAAAGGITTLIDMPLNSD---------PSTISTETLKLKVDAAEKRIYVDVGFWGGLV-PENAYNASALEALL 186 (413)
Q Consensus 117 ~~~~~~~~al~~GvTTv~d~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~ 186 (413)
++....+.+.+.|++.+--...... +...+.+.++...+....... .+....... .......+.++...
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl-~i~~~~~~~~~~~~~~~~~i~~A~ 101 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGI-KIVGTGVYVAEKSSDWEKMFKFAK 101 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTC-EEEEEEEECCSSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCC-eEEEEeccCCccHHHHHHHHHHHH
Confidence 4566778888999999865531100 122334455555555443322 222111111 11222334455555
Q ss_pred HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015110 187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 187 ~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
.-|+..+.+.. ..+.++.+.+.|+++|+.+.+|...
T Consensus 102 ~lGa~~v~~~~-----------~~~~~~~l~~~a~~~gv~l~~En~~ 137 (262)
T 3p6l_A 102 AMDLEFITCEP-----------ALSDWDLVEKLSKQYNIKISVHNHP 137 (262)
T ss_dssp HTTCSEEEECC-----------CGGGHHHHHHHHHHHTCEEEEECCS
T ss_pred HcCCCEEEecC-----------CHHHHHHHHHHHHHhCCEEEEEeCC
Confidence 67888776531 1256788999999999999999753
No 210
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=39.73 E-value=56 Score=29.78 Aligned_cols=51 Identities=10% Similarity=0.202 Sum_probs=32.6
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAE 232 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e 232 (413)
.+.++.+++.|+.++-+. .+ .+..+.++.+|-+++++.+.+. .++|.+++.
T Consensus 36 ~~lv~~li~~Gv~Gl~v~--Gt-TGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg 89 (316)
T 3e96_A 36 KETVDRIVDNGIDVIVPC--GN-TSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG 89 (316)
T ss_dssp HHHHHHHHTTTCCEECTT--SG-GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeC--cc-ccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC
Confidence 345556667899887432 21 1345677888888887776653 467888874
No 211
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=39.71 E-value=2.1e+02 Score=25.70 Aligned_cols=114 Identities=5% Similarity=0.017 Sum_probs=59.2
Q ss_pred CccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceec-CCchhhHHHHHHHHHcCCcE
Q 015110 114 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV-PENAYNASALEALLNAGVLG 192 (413)
Q Consensus 114 ~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~G~~~ 192 (413)
+.+.+....+..+.+||..++-++........+.+.-.+..+.......-++....+.. ....+.++..+...+.|+++
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gada 112 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADA 112 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCE
Confidence 34455666777889999999887622111222333333333333211111122222222 22344566667777889998
Q ss_pred EEEeecCCCCCCCC-CCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 193 LKSFMCPSGINDFP-MTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 193 ik~~~~~~~~~~~~-~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
+-+.. +. .+. ..+.+.+.+-++. |...++|+.+.-
T Consensus 113 vlv~~-P~---y~~~~~s~~~l~~~f~~ia~a~~lPiilYn 149 (307)
T 3s5o_A 113 AMVVT-PC---YYRGRMSSAALIHHYTKVADLSPIPVVLYS 149 (307)
T ss_dssp EEEEC-CC---TTGGGCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEEcC-CC---cCCCCCCHHHHHHHHHHHHhhcCCCEEEEe
Confidence 86532 10 111 1366666666554 455789998863
No 212
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=39.22 E-value=30 Score=31.40 Aligned_cols=48 Identities=13% Similarity=0.122 Sum_probs=33.6
Q ss_pred HHHHHHHcCCcEEEE--eecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEe
Q 015110 181 ALEALLNAGVLGLKS--FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVH 230 (413)
Q Consensus 181 ~l~~l~~~G~~~ik~--~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 230 (413)
.+++.++.|++++|+ ...+.. .......+.+.++.++|+++|+|++++
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs--~~e~~~l~~la~vv~ea~~~GlP~~~e 182 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSD--AGTAPTLEATAHAVNEAAAAQLPIMLE 182 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTC--TTHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHCCCCEEEEEEEECCCC--hhHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 467777889999884 343321 111224557888899999999999998
No 213
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=39.00 E-value=89 Score=28.35 Aligned_cols=52 Identities=10% Similarity=0.114 Sum_probs=34.2
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc--CCCEEEecCC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY--KRPLLVHAEM 233 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~--g~~v~~H~e~ 233 (413)
.+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+. .++|.+++-.
T Consensus 32 ~~lv~~li~~Gv~Gl~v~-GtT--GE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~ 85 (313)
T 3dz1_A 32 DRLTDFYAEVGCEGVTVL-GIL--GEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSA 85 (313)
T ss_dssp HHHHHHHHHTTCSEEEES-TGG--GTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred HHHHHHHHHCCCCEEEeC-ccC--cChhhCCHHHHHHHHHHHHHHcCCCcEEEecCC
Confidence 345666678899987542 111 245667888888888777654 4678888743
No 214
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=38.70 E-value=2.1e+02 Score=25.37 Aligned_cols=66 Identities=14% Similarity=0.112 Sum_probs=42.1
Q ss_pred hHHHHHHHHHcCCcEEEEeecCCCCCCCC-CCCHHHHHHHH---HHHHhcCCCEEEecCChhhchhhHhhc
Q 015110 178 NASALEALLNAGVLGLKSFMCPSGINDFP-MTNASHIKEGL---SVLARYKRPLLVHAEMEKGSERHVKLE 244 (413)
Q Consensus 178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~-~~~~~~l~~~~---~~A~~~g~~v~~H~e~~~~~~~~~~~~ 244 (413)
.++..++++++|++-+-+... +...+.. ....+|+.+++ +..++.++++.+-....+.++..+..+
T Consensus 32 a~~~a~~m~~~GAdiIDIGge-STRPga~~vs~eeE~~Rv~pvi~~l~~~~v~iSIDT~~~~Va~~al~aG 101 (270)
T 4hb7_A 32 AINRVKAMIDEGADIIDVGGV-STRPGHEMVTLEEELNRVLPVVEAIVGFDVKISVDTFRSEVAEACLKLG 101 (270)
T ss_dssp HHHHHHHHHHTTCSEEEEESC-CCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEEECSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCEEEECCc-cCCCCCCCCchHHHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHhc
Confidence 456777888999988776432 2222222 33455666654 444557889999988888777666543
No 215
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=38.16 E-value=1.9e+02 Score=26.17 Aligned_cols=109 Identities=13% Similarity=0.078 Sum_probs=57.7
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceec-CCchhhHHHHHHHHHcCCcEE
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV-PENAYNASALEALLNAGVLGL 193 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~G~~~i 193 (413)
.+.+....+..+.+||..++-++........+.+.-.+..+...... -++....+.. ....+.++..+...+.|++++
T Consensus 28 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadav 106 (313)
T 3dz1_A 28 DVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGV 106 (313)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEE
Confidence 34556667778899999998776221112223322222222221111 1222222332 233455666667777899998
Q ss_pred EEeecCCCCCCCCCCCHHHHHHHHHHH-HhcC--CCEEEe
Q 015110 194 KSFMCPSGINDFPMTNASHIKEGLSVL-ARYK--RPLLVH 230 (413)
Q Consensus 194 k~~~~~~~~~~~~~~~~~~l~~~~~~A-~~~g--~~v~~H 230 (413)
-+. .+ . ...+.+.+.+-++.. ...+ +|+.+.
T Consensus 107 lv~-~P----~-~~~s~~~l~~~f~~va~a~~~~lPiilY 140 (313)
T 3dz1_A 107 MIA-PP----P-SLRTDEQITTYFRQATEAIGDDVPWVLQ 140 (313)
T ss_dssp EEC-CC----T-TCCSHHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred EEC-CC----C-CCCCHHHHHHHHHHHHHhCCCCCcEEEE
Confidence 653 22 1 124667666666544 4556 999886
No 216
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=38.12 E-value=2.2e+02 Score=25.46 Aligned_cols=51 Identities=18% Similarity=0.169 Sum_probs=35.6
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc-C----CCEEEecCChh
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-K----RPLLVHAEMEK 235 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~-g----~~v~~H~e~~~ 235 (413)
.+.++.+.+.|+..+.+- +.....++..+.++++..++. + +++.+|++|..
T Consensus 153 ~~~~~~~~~~G~~~i~l~------DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~ 208 (293)
T 3ewb_X 153 IEAVQTAIDAGATVINIP------DTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDL 208 (293)
T ss_dssp HHHHHHHHHTTCCEEEEE------CSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTT
T ss_pred HHHHHHHHHcCCCEEEec------CCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCc
Confidence 455666777899876543 122357888888888877753 3 67999998865
No 217
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=38.07 E-value=1.9e+02 Score=31.48 Aligned_cols=52 Identities=15% Similarity=0.069 Sum_probs=36.5
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh-cCCCEEEecCChhh
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG 236 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~e~~~~ 236 (413)
.+..+++.+.|+..+.+-- .....++..+.++++..++ .++++.+|+++...
T Consensus 695 ~~~a~~~~~~Ga~~i~l~D------t~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hnt~G 747 (1150)
T 3hbl_A 695 VKLAKELEREGFHILAIKD------MAGLLKPKAAYELIGELKSAVDLPIHLHTHDTSG 747 (1150)
T ss_dssp HHHHHHHHHTTCSEEEEEE------TTCCCCHHHHHHHHHHHHHHCCSCEEEEECBTTS
T ss_pred HHHHHHHHHcCCCeeeEcC------ccCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCCc
Confidence 4556667778987664421 1235678888888887765 58999999988764
No 218
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=38.02 E-value=2.1e+02 Score=25.30 Aligned_cols=116 Identities=9% Similarity=-0.030 Sum_probs=63.2
Q ss_pred HHHHHHcCCcEEEEeecCCCCCCCCCCC----HHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccCC
Q 015110 182 LEALLNAGVLGLKSFMCPSGINDFPMTN----ASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYL 257 (413)
Q Consensus 182 l~~l~~~G~~~ik~~~~~~~~~~~~~~~----~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (413)
++.+.+.|..++.++.... .+... .+.++++.+.++++|+.+..+....... . .. . ..
T Consensus 41 ~~~a~~~G~~~vEl~~~~~----~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~~~~~~~~----~-~~------~---l~ 102 (316)
T 3qxb_A 41 GLVRDDLGLEYVQYTYDLT----DPWWPDIERDRRAIAYAKAFRKAGLTIESTFGGLASY----T-YN------H---FL 102 (316)
T ss_dssp HHHHHTSCCCEEEEETTTS----CTTSCHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHH----T-SC------B---TT
T ss_pred HHHHHHcCCCEEEeecccc----CccccccchhhHHHHHHHHHHHcCCeEEEeecccccc----c-cc------c---CC
Confidence 4444578999998764321 11122 2367778888889999886542211000 0 00 0 00
Q ss_pred CCCchH--HHHHHHHHHHHHHhhcccCCCCCCceEEEEccCC--------h---hh----HH----HHHHHHHHCCCC-E
Q 015110 258 KTRPPS--WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD--------A---SS----SL----DLLMEAKTNGDS-I 315 (413)
Q Consensus 258 ~~~p~~--~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~--------~---~~----~~----~~i~~ak~~G~~-v 315 (413)
..-|.. .....+.+.+++|+.. |++..+.|... . ++ .+ ++.+.+++.|+. +
T Consensus 103 ~~d~~~r~~~~~~~~~~i~~A~~l-------Ga~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l 175 (316)
T 3qxb_A 103 APTLELQSLGYQHLKRAIDMTAAM-------EVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGLSML 175 (316)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHT-------TCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHc-------CCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCeEE
Confidence 011111 1134677888888875 78877766532 0 01 11 334456778999 9
Q ss_pred EEEcccc
Q 015110 316 TVETCPH 322 (413)
Q Consensus 316 ~~e~~p~ 322 (413)
..|..|+
T Consensus 176 ~lE~~~~ 182 (316)
T 3qxb_A 176 YVEPVPL 182 (316)
T ss_dssp EECCCSC
T ss_pred EEEecCC
Confidence 9988553
No 219
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=37.34 E-value=79 Score=27.27 Aligned_cols=48 Identities=15% Similarity=0.056 Sum_probs=35.8
Q ss_pred hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015110 178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (413)
Q Consensus 178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 231 (413)
..++++.+.+.|++++.+..-.. ....+.+.++++++.|+ ++++.+|-
T Consensus 78 M~~Di~~~~~~GadGvV~G~Lt~----dg~iD~~~~~~Li~~a~--~~~vTFHR 125 (224)
T 2bdq_A 78 MEEDILRAVELESDALVLGILTS----NNHIDTEAIEQLLPATQ--GLPLVFHM 125 (224)
T ss_dssp HHHHHHHHHHTTCSEEEECCBCT----TSSBCHHHHHHHHHHHT--TCCEEECG
T ss_pred HHHHHHHHHHcCCCEEEEeeECC----CCCcCHHHHHHHHHHhC--CCeEEEEC
Confidence 35667777889999987643221 23579999999998875 88999993
No 220
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=35.92 E-value=56 Score=28.11 Aligned_cols=116 Identities=11% Similarity=-0.009 Sum_probs=60.0
Q ss_pred eeeecccccCCCCCCCccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceec---CCc
Q 015110 99 GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV---PEN 175 (413)
Q Consensus 99 GlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 175 (413)
.+|| |+=+ ......+++...++.+..+|+-+++..|. .+....+...+. .+.+....++. ...
T Consensus 5 ~~iD-ht~L--~p~~t~~~i~~l~~~a~~~~~~aVcv~p~----------~v~~~~~~l~~~-~v~v~~vigFP~G~~~~ 70 (220)
T 1ub3_A 5 AHID-HTLL--KPTATLEEVAKAAEEALEYGFYGLCIPPS----------YVAWVRARYPHA-PFRLVTVVGFPLGYQEK 70 (220)
T ss_dssp GGEE-EECC--CTTCCHHHHHHHHHHHHHHTCSEEECCGG----------GHHHHHHHCTTC-SSEEEEEESTTTCCSCH
T ss_pred Hhcc-eecc--CCCCCHHHHHHHHHHHHHhCCCEEEECHH----------HHHHHHHHhCCC-CceEEEEecCCCCCCch
Confidence 4566 4433 23345677888899999999999986551 112222222221 12232222221 111
Q ss_pred hhhHHHHHHHHHcCCcEEEEeecCCCC-CCCCCCCHHHHHHHHHHHHhcCCCEE
Q 015110 176 AYNASALEALLNAGVLGLKSFMCPSGI-NDFPMTNASHIKEGLSVLARYKRPLL 228 (413)
Q Consensus 176 ~~~~~~l~~l~~~G~~~ik~~~~~~~~-~~~~~~~~~~l~~~~~~A~~~g~~v~ 228 (413)
.....++++.++.|++.+.+.+..... .+....-.+++.++.+.+++..+++.
T Consensus 71 ~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvI 124 (220)
T 1ub3_A 71 EVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVI 124 (220)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEE
Confidence 234578888999999998876543210 00001123456666666654434433
No 221
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=35.73 E-value=2.2e+02 Score=25.34 Aligned_cols=47 Identities=15% Similarity=0.165 Sum_probs=30.8
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCC----CCHHHHHHHHHHHHhcCCCEE
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPM----TNASHIKEGLSVLARYKRPLL 228 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~----~~~~~l~~~~~~A~~~g~~v~ 228 (413)
.+.++.+.+.|..++.+...+. ..+. .+.+.+.++.+.++++|+.+.
T Consensus 18 ~~~l~~~~~~G~~~vEl~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 68 (340)
T 2zds_A 18 EEVCRLARDFGYDGLELACWGD---HFEVDKALADPSYVDSRHQLLDKYGLKCW 68 (340)
T ss_dssp HHHHHHHHHHTCSEEEEESSTT---TCCHHHHHHCTTHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCCEEEeccccc---cCCccccccCHHHHHHHHHHHHHcCCeEE
Confidence 3456777778999988764321 1111 133467788888999999875
No 222
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=35.54 E-value=2.4e+02 Score=25.04 Aligned_cols=108 Identities=12% Similarity=0.060 Sum_probs=57.1
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHcCCcEEE
Q 015110 116 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGVLGLK 194 (413)
Q Consensus 116 e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~G~~~ik 194 (413)
+.+....+..+.+|+..++-++........+.+.-.+..+....... . ...+... ...+.++..+...+.|++++-
T Consensus 19 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-g--vi~Gvg~~~t~~ai~la~~A~~~Gadavl 95 (286)
T 2r91_A 19 ELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAAR-R--VIVQVASLNADEAIALAKYAESRGAEAVA 95 (286)
T ss_dssp HHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCS-S--EEEECCCSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-C--EEEeeCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 34556677778999999988762211122233322232332221100 0 1222222 234456666777778999886
Q ss_pred EeecCCCCCCCCC-CCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 195 SFMCPSGINDFPM-TNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 195 ~~~~~~~~~~~~~-~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
+.. + .+.. .+.+.+.+-++. |...++|+.+.-
T Consensus 96 v~~-P----~y~~~~s~~~l~~~f~~va~a~~lPiilYn 129 (286)
T 2r91_A 96 SLP-P----YYFPRLSERQIAKYFRDLCSAVSIPVFLYN 129 (286)
T ss_dssp ECC-S----CSSTTCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EcC-C----cCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 532 1 1122 366766666654 556789998863
No 223
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=35.15 E-value=84 Score=28.89 Aligned_cols=51 Identities=14% Similarity=0.158 Sum_probs=36.4
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh-c-CCCEEEecCChh
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR-Y-KRPLLVHAEMEK 235 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~-~-g~~v~~H~e~~~ 235 (413)
.+.++++.+.|+..+.+. +.....++.++.++++..++ . ++++.+|++|..
T Consensus 172 ~~~~~~~~~~Ga~~i~l~------DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~ 224 (337)
T 3ble_A 172 KSLVEHLSKEHIERIFLP------DTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDY 224 (337)
T ss_dssp HHHHHHHHTSCCSEEEEE------CTTCCCCHHHHHHHHHHHHHHCTTSCEEEECBCTT
T ss_pred HHHHHHHHHcCCCEEEEe------cCCCCcCHHHHHHHHHHHHHhcCCCeEEEEecCCc
Confidence 445566677899876543 12235788888888888775 4 789999998865
No 224
>3epo_A Thiamine biosynthesis protein THIC; alpha-beta barrel, SAM superfamily, biosynthetic protein; HET: MP5; 2.10A {Caulobacter crescentus} PDB: 3epm_A* 3epn_A*
Probab=34.91 E-value=1e+02 Score=30.32 Aligned_cols=53 Identities=13% Similarity=0.149 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhhcccCCCCCCceEEEEccCCh-------hhH--------HHHHHHHHHCCCCEEEEccccccccc
Q 015110 267 AAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-------SSS--------LDLLMEAKTNGDSITVETCPHYLAFS 327 (413)
Q Consensus 267 ~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~-------~~~--------~~~i~~ak~~G~~v~~e~~p~~l~l~ 327 (413)
+..++++++++++ ++-+.+...-.+ |++ -++.+.|++.|+.|-+| -|-|.-++
T Consensus 354 e~FD~ileI~k~Y-------DVtlSLGDglRPG~iaDA~D~AQ~~EL~~LGELtkrAwe~gVQVMIE-GPGHVPl~ 421 (612)
T 3epo_A 354 ERFDEICEIMRAY-------DVSFSLGDGLRPGSTADANDEAQFSELRTLGELTKVAWKHGVQVMIE-GPGHVAMH 421 (612)
T ss_dssp HTHHHHHHHHTTT-------TCEEEECCTTCCSSGGGTTCHHHHHHHHHHHHHHHHHHHTTCCEEEE-CCCBCCHH
T ss_pred HHHHHHHHHHHHh-------CeEEecccccCCCccccCCcHHHHHHHHHHHHHHHHHHHcCCcEEEE-CCCCCCHH
Confidence 3578899999876 666555543211 011 16778899999999998 67667555
No 225
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=34.90 E-value=1.2e+02 Score=27.39 Aligned_cols=109 Identities=12% Similarity=0.167 Sum_probs=58.1
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHH----HHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHHcCC
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTE----TLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGV 190 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ 190 (413)
.+.+....+..+.+|+..++-++........+.+ .++...+...++..+-.+. + .....+.++..+...+.|+
T Consensus 24 ~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g-~~~t~~ai~la~~a~~~Ga 100 (300)
T 3eb2_A 24 ADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGV--A-STSVADAVAQAKLYEKLGA 100 (300)
T ss_dssp HHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEE--E-ESSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC--C-CCCHHHHHHHHHHHHHcCC
Confidence 3445566777789999998876521111122222 2222233333332222221 1 1233455666777777899
Q ss_pred cEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 191 LGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 191 ~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
+++-+.. + .+...+.+.+.+-++. |...++|+.+.-
T Consensus 101 davlv~~-P----~y~~~~~~~l~~~f~~va~a~~lPiilYn 137 (300)
T 3eb2_A 101 DGILAIL-E----AYFPLKDAQIESYFRAIADAVEIPVVIYT 137 (300)
T ss_dssp SEEEEEE-C----CSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEEcC-C----CCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 9886532 1 1112366666666654 556789998873
No 226
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=34.45 E-value=34 Score=30.79 Aligned_cols=36 Identities=22% Similarity=0.009 Sum_probs=27.0
Q ss_pred eeecccccCCCCCCCccchHHHHHHHHhCCceEEEeCC
Q 015110 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMP 137 (413)
Q Consensus 100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d~~ 137 (413)
++|.|+|...+ ..........+.|.+.|++.+.--.
T Consensus 3 ~~DLH~Ht~~S--Dg~~~~~elv~~A~~~Gl~~iaiTD 38 (292)
T 2yb1_A 3 NIDLHFHSRTS--DGALTPTEVIDRAAARAPALLALTD 38 (292)
T ss_dssp CEECCBCCTTT--TCSSCHHHHHHHHHTTCCSEEEECC
T ss_pred ccccccCCCcc--CCCCCHHHHHHHHHHCCCCEEEEec
Confidence 68999999765 2233456678889999999887554
No 227
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=33.51 E-value=2.4e+02 Score=24.52 Aligned_cols=21 Identities=14% Similarity=0.254 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHhcCCCE-EEec
Q 015110 211 SHIKEGLSVLARYKRPL-LVHA 231 (413)
Q Consensus 211 ~~l~~~~~~A~~~g~~v-~~H~ 231 (413)
+.+++.++.|+++|.+. .+|.
T Consensus 90 ~~~~~~i~~a~~lG~~~v~~~~ 111 (301)
T 3cny_A 90 EAFEKHCQYLKAINAPVAVVSE 111 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEecC
Confidence 46778888888888764 4554
No 228
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=33.49 E-value=99 Score=27.14 Aligned_cols=51 Identities=16% Similarity=0.120 Sum_probs=39.3
Q ss_pred HHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchh
Q 015110 181 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER 239 (413)
Q Consensus 181 ~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~ 239 (413)
++.+....|++.+-+... ..+++.+..+++.|+++|+.+.+-+++.++...
T Consensus 115 qi~ea~~~GAD~ilLi~a--------~l~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~ 165 (251)
T 1i4n_A 115 QVKLASSVGADAILIIAR--------ILTAEQIKEIYEAAEELGMDSLVEVHSREDLEK 165 (251)
T ss_dssp HHHHHHHTTCSEEEEEGG--------GSCHHHHHHHHHHHHTTTCEEEEEECSHHHHHH
T ss_pred HHHHHHHcCCCEEEEecc--------cCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence 466677899999866432 357789999999999999988887777665443
No 229
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=33.37 E-value=2.6e+02 Score=24.83 Aligned_cols=109 Identities=9% Similarity=0.038 Sum_probs=59.3
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHcCCcEE
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGVLGL 193 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~G~~~i 193 (413)
.+.+....+..+.+|+..++-++........+.+.-.+..+....... . ...+... ...+.++..+...+.|++++
T Consensus 19 ~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-g--ViaGvg~~~t~~ai~la~~A~~~Gadav 95 (288)
T 2nuw_A 19 VDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTH-K--LIFQVGSLNLNDVMELVKFSNEMDILGV 95 (288)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCS-C--EEEECCCSCHHHHHHHHHHHHTSCCSEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-C--eEEeeCCCCHHHHHHHHHHHHhcCCCEE
Confidence 344556677788999999987762212122333333333444332111 1 2222222 23345566666677899988
Q ss_pred EEeecCCCCCCCCC-CCHHHHHHHHH-HHHhcCCCEEEec
Q 015110 194 KSFMCPSGINDFPM-TNASHIKEGLS-VLARYKRPLLVHA 231 (413)
Q Consensus 194 k~~~~~~~~~~~~~-~~~~~l~~~~~-~A~~~g~~v~~H~ 231 (413)
-+.. + .+.. .+.+.+.+-++ .|...++|+.+.-
T Consensus 96 lv~~-P----~y~~~~s~~~l~~~f~~va~a~~lPiilYn 130 (288)
T 2nuw_A 96 SSHS-P----YYFPRLPEKFLAKYYEEIARISSHSLYIYN 130 (288)
T ss_dssp EECC-C----CSSCSCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred EEcC-C----cCCCCCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 6532 1 1222 36666666654 4556789998863
No 230
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=33.08 E-value=93 Score=27.69 Aligned_cols=103 Identities=17% Similarity=0.051 Sum_probs=60.2
Q ss_pred HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHHcCCcEEEEeec
Q 015110 119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMC 198 (413)
Q Consensus 119 ~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~ 198 (413)
...++.+..+|...+........ -..+.+.+....+.. .-+.+ .. .+.-+ ...+.++...|++++-+..
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~-f~Gs~~~L~~ir~~v-~lPVl-~K---dfi~d----~~qi~ea~~~GAD~VlLi~- 150 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPS-FQGAPEFLTAARQAC-SLPAL-RK---DFLFD----PYQVYEARSWGADCILIIM- 150 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTT-TCCCHHHHHHHHHTS-SSCEE-EE---SCCCS----THHHHHHHHTTCSEEEEET-
T ss_pred HHHHHHHHHCCCCEEEEeccccc-cCCCHHHHHHHHHhc-CCCEE-EC---CccCC----HHHHHHHHHcCCCEEEEcc-
Confidence 45677788899887754321000 012345554433221 11111 11 11111 1257777889999986642
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchh
Q 015110 199 PSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER 239 (413)
Q Consensus 199 ~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~ 239 (413)
...+++++.++++.++++|+.+.+-+++.++...
T Consensus 151 -------a~L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~ 184 (272)
T 3tsm_A 151 -------ASVDDDLAKELEDTAFALGMDALIEVHDEAEMER 184 (272)
T ss_dssp -------TTSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHH
T ss_pred -------cccCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence 2357889999999999999988777767666543
No 231
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=32.93 E-value=49 Score=33.98 Aligned_cols=52 Identities=21% Similarity=0.216 Sum_probs=36.2
Q ss_pred HHHHHHHHcCCcEEEEe-ec---CCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015110 180 SALEALLNAGVLGLKSF-MC---PSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~-~~---~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 231 (413)
+.++.+.+.|+.++|+- ++ ..+..+..+.-.+....+++.|+++++.|.+|-
T Consensus 453 ~~f~~~~~~Gv~GVKvdF~g~~~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnfHg 508 (738)
T 2d73_A 453 KAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAADYKIMVNAHE 508 (738)
T ss_dssp HHHHHHHHTTCCEEEEECCSSCBSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEETT
T ss_pred HHHHHHHHcCCCEEEeCccccCcCCcccccchHHHHHHHHHHHHHHHcCcEEEccC
Confidence 45556667899999984 42 222112223345678899999999999999993
No 232
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=32.81 E-value=1.4e+02 Score=26.67 Aligned_cols=52 Identities=13% Similarity=0.057 Sum_probs=32.2
Q ss_pred HHHHHHHHH-cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh---cCCCEEEecCC
Q 015110 179 ASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 233 (413)
Q Consensus 179 ~~~l~~l~~-~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~e~ 233 (413)
.+.++.+++ .|+.++-+.- .+ +..+.++.+|-+++++.+.+ -.++|.+++-.
T Consensus 27 ~~lv~~li~~~Gv~gl~~~G-tt--GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~ 82 (293)
T 1f6k_A 27 RQIIRHNIDKMKVDGLYVGG-ST--GENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGS 82 (293)
T ss_dssp HHHHHHHHHTSCCSEEEESS-GG--GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC
T ss_pred HHHHHHHHhhCCCcEEEeCc-cc--cchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCC
Confidence 345666677 8888875431 11 23456788877777776654 23677777643
No 233
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=32.80 E-value=2.5e+02 Score=26.19 Aligned_cols=50 Identities=12% Similarity=0.097 Sum_probs=32.7
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCChhh
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEMEKG 236 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~~~~ 236 (413)
+.++.+.+. +..+.+-- ......+.++.++++..++. ++++.+|++|...
T Consensus 149 ~~~~~~~~~-a~~i~l~D------T~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~G 201 (382)
T 2ztj_A 149 AVYEAVAPY-VDRVGLAD------TVGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTG 201 (382)
T ss_dssp HHHHHHGGG-CSEEEEEE------TTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTS
T ss_pred HHHHHHHHh-cCEEEecC------CCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCcc
Confidence 444455556 66554321 12356788888888887764 6889999988754
No 234
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=32.58 E-value=89 Score=27.54 Aligned_cols=54 Identities=11% Similarity=0.120 Sum_probs=41.2
Q ss_pred HHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHh
Q 015110 181 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVK 242 (413)
Q Consensus 181 ~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~ 242 (413)
.+.+....|++.+-+... ..++++++.+.+.|+++|+-+.+-+++.++.+..+.
T Consensus 118 QI~eAr~~GADaILLI~a--------~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~ 171 (258)
T 4a29_A 118 QIDDAYNLGADTVLLIVK--------ILTERELESLLEYARSYGMEPLILINDENDLDIALR 171 (258)
T ss_dssp HHHHHHHHTCSEEEEEGG--------GSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHH
T ss_pred HHHHHHHcCCCeeehHHh--------hcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhc
Confidence 466666789999866532 468899999999999999988777777776654443
No 235
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=32.55 E-value=1.6e+02 Score=25.71 Aligned_cols=86 Identities=12% Similarity=0.102 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhcCCC-EEEecCChhhchhhHhhccCcCCccccccCCCCCchHH--HHHHHHHHHHHHhhcccCCCCCC
Q 015110 211 SHIKEGLSVLARYKRP-LLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSW--EEAAIRELLTVAKDTRTDGPAEG 287 (413)
Q Consensus 211 ~~l~~~~~~A~~~g~~-v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--E~~~v~~~~~~a~~~~~~~~~~g 287 (413)
+.+++.++.|+++|.+ +.+|....... . ..+...... -...+.++.+++++. |
T Consensus 104 ~~~~~~i~~a~~lGa~~v~~~~g~~~~~------------~-----~~p~~~~~~~~~~~~l~~l~~~a~~~-------G 159 (287)
T 3kws_A 104 DTMKEIIAAAGELGSTGVIIVPAFNGQV------------P-----ALPHTMETRDFLCEQFNEMGTFAAQH-------G 159 (287)
T ss_dssp HHHHHHHHHHHHTTCSEEEECSCCTTCC------------S-----BCCSSHHHHHHHHHHHHHHHHHHHHT-------T
T ss_pred HHHHHHHHHHHHcCCCEEEEecCcCCcC------------C-----CCCCHHHHHHHHHHHHHHHHHHHHHc-------C
Confidence 5688899999999987 45675311100 0 000011111 134677777777764 7
Q ss_pred ceEEEEcc--------CChhhHHHHHHHHHHCCCCEEEEcc
Q 015110 288 AHLHIVHL--------SDASSSLDLLMEAKTNGDSITVETC 320 (413)
Q Consensus 288 ~~vhi~H~--------s~~~~~~~~i~~ak~~G~~v~~e~~ 320 (413)
+++-+... .+.++.+++++......+.+..|++
T Consensus 160 v~l~lE~~~~~~~~~~~~~~~~~~ll~~v~~~~vg~~~D~~ 200 (287)
T 3kws_A 160 TSVIFEPLNRKECFYLRQVADAASLCRDINNPGVRCMGDFW 200 (287)
T ss_dssp CCEEECCCCTTTCSSCCCHHHHHHHHHHHCCTTEEEEEEHH
T ss_pred CEEEEEecCcccCcccCCHHHHHHHHHHcCCCCeeEEeehH
Confidence 88777743 2333566777766444455666643
No 236
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=32.11 E-value=36 Score=29.83 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=25.4
Q ss_pred eeecccccCCCCCCCccchHHHHHHHHhCCceEEEe
Q 015110 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLID 135 (413)
Q Consensus 100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTTv~d 135 (413)
++|.|+|...+ ....+.....+.|.+.|++.+.-
T Consensus 21 ~~DlH~Ht~~S--Dg~~t~ee~v~~A~~~Gl~~i~i 54 (255)
T 2anu_A 21 LCDFHVHTNMS--DGHLPLGEVVDLFGKHGVDVVSI 54 (255)
T ss_dssp EEEEEECCTTT--TCSSCHHHHHHHHHHTTCSEEEE
T ss_pred EEEEeecCCCc--CCCCCHHHHHHHHHHCCCCEEEE
Confidence 69999999765 23345566788889999987754
No 237
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=30.79 E-value=2.2e+02 Score=25.06 Aligned_cols=85 Identities=16% Similarity=0.136 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhcCCCEEEecC-ChhhchhhHhhccCcCCccccccCCCCC-c--hH--HHHHHHHHHHHHHhhcccCCC
Q 015110 211 SHIKEGLSVLARYKRPLLVHAE-MEKGSERHVKLEDDTLDTRSYSTYLKTR-P--PS--WEEAAIRELLTVAKDTRTDGP 284 (413)
Q Consensus 211 ~~l~~~~~~A~~~g~~v~~H~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p--~~--~E~~~v~~~~~~a~~~~~~~~ 284 (413)
+.+++.++.|+++|.+..++.- .... . ..... + .. .-.+.+.++...+++.
T Consensus 107 ~~~~~~i~~A~~lG~~~v~~~~~~~~g-------------~-----~~~~~~~~~~~~~~~~~~l~~l~~~a~~~----- 163 (309)
T 2hk0_A 107 AFFERTLSNVAKLDIHTIGGALHSYWP-------------I-----DYSQPVDKAGDYARGVEGINGIADFANDL----- 163 (309)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTSCSS-------------C-----CTTSCCCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred HHHHHHHHHHHHcCCCEEEeecccccc-------------c-----cCCCcCChHHHHHHHHHHHHHHHHHHHHc-----
Confidence 5788999999999998776531 1000 0 00000 0 00 1134667777777764
Q ss_pred CCCceEEEEccC--------ChhhHHHHHHHHHHCCCCEEEEcc
Q 015110 285 AEGAHLHIVHLS--------DASSSLDLLMEAKTNGDSITVETC 320 (413)
Q Consensus 285 ~~g~~vhi~H~s--------~~~~~~~~i~~ak~~G~~v~~e~~ 320 (413)
|+++-+.... +.++..++++.....++.+..|++
T Consensus 164 --gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v~~~~vg~~~D~~ 205 (309)
T 2hk0_A 164 --GINLCIEVLNRFENHVLNTAAEGVAFVKDVGKNNVKVMLDTF 205 (309)
T ss_dssp --TCEEEEECCCTTTCSSCCSHHHHHHHHHHHTCTTEEEEEEHH
T ss_pred --CCEEEEeecccccccccCCHHHHHHHHHHcCCCCeEEEEehh
Confidence 8888777652 333566777776545666777764
No 238
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=30.24 E-value=82 Score=28.55 Aligned_cols=51 Identities=18% Similarity=0.165 Sum_probs=36.3
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc--CCCEEEecCChh
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY--KRPLLVHAEMEK 235 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~--g~~v~~H~e~~~ 235 (413)
.+.++.+.+.|+..+.+.- .....+++++.++++..++. ++++.+|++|..
T Consensus 160 ~~~~~~~~~~Ga~~i~l~D------T~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~ 212 (307)
T 1ydo_A 160 IRLSEALFEFGISELSLGD------TIGAANPAQVETVLEALLARFPANQIALHFHDTR 212 (307)
T ss_dssp HHHHHHHHHHTCSCEEEEC------SSCCCCHHHHHHHHHHHHTTSCGGGEEEECBGGG
T ss_pred HHHHHHHHhcCCCEEEEcC------CCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 4455566678988765531 12357889999999888763 578999998865
No 239
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=30.19 E-value=1.4e+02 Score=25.74 Aligned_cols=43 Identities=14% Similarity=0.112 Sum_probs=23.0
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEe
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVH 230 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 230 (413)
+.++.+.+.|..++.++.. ..+...+.++.+.++++|+.+..+
T Consensus 22 ~~l~~~~~~G~~~vEl~~~--------~~~~~~~~~~~~~l~~~gl~~~~~ 64 (275)
T 3qc0_A 22 EAVDICLKHGITAIAPWRD--------QVAAIGLGEAGRIVRANGLKLTGL 64 (275)
T ss_dssp HHHHHHHHTTCCEEECBHH--------HHHHHCHHHHHHHHHHHTCEESCE
T ss_pred HHHHHHHHcCCCEEEeccc--------cccccCHHHHHHHHHHcCCceEEe
Confidence 4455555667776665321 012334555566666677766444
No 240
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=30.19 E-value=2.9e+02 Score=24.51 Aligned_cols=109 Identities=11% Similarity=0.043 Sum_probs=57.9
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecC-CchhhHHHHHHHHHcCCcEE
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGVLGL 193 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~G~~~i 193 (413)
.+.+....+..+.+|+..++-++........+.+.-.+..+....... . ...+... ...+.++..+...+.|++++
T Consensus 19 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~-g--viaGvg~~~t~~ai~la~~A~~~Gadav 95 (293)
T 1w3i_A 19 KEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTN-K--IIFQVGGLNLDDAIRLAKLSKDFDIVGI 95 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCS-C--EEEECCCSCHHHHHHHHHHGGGSCCSEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcC-C--EEEecCCCCHHHHHHHHHHHHhcCCCEE
Confidence 344556677778999999987762211122333333333333332111 1 2222222 22344555666666899988
Q ss_pred EEeecCCCCCCCCC-CCHHHHHHHHHH-HHhcCCCEEEec
Q 015110 194 KSFMCPSGINDFPM-TNASHIKEGLSV-LARYKRPLLVHA 231 (413)
Q Consensus 194 k~~~~~~~~~~~~~-~~~~~l~~~~~~-A~~~g~~v~~H~ 231 (413)
-+.. + .+.. .+.+.+.+-++. |...++|+.+.-
T Consensus 96 lv~~-P----~y~~~~s~~~l~~~f~~va~a~~lPiilYn 130 (293)
T 1w3i_A 96 ASYA-P----YYYPRMSEKHLVKYFKTLCEVSPHPVYLYN 130 (293)
T ss_dssp EEEC-C----CSCSSCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEcC-C----CCCCCCCHHHHHHHHHHHHhhCCCCEEEEE
Confidence 6532 1 1122 366766666644 556789998863
No 241
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=30.12 E-value=1e+02 Score=27.12 Aligned_cols=103 Identities=13% Similarity=0.029 Sum_probs=58.0
Q ss_pred HHHHHHHhCCceEEEeCCCCC--CCCCCcHHHHHHHHHHHhcCCeeeE--Eee-ceecCCch---hhHHHHHHHHHcCCc
Q 015110 120 SGTKAAAAGGITTLIDMPLNS--DPSTISTETLKLKVDAAEKRIYVDV--GFW-GGLVPENA---YNASALEALLNAGVL 191 (413)
Q Consensus 120 ~~~~~al~~GvTTv~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~---~~~~~l~~l~~~G~~ 191 (413)
..+..|.++|-..+--.. +. .....+...++...+... ..+.+ .+. +.+.-+.. ...++++.+.+.|++
T Consensus 12 ~~a~~A~~~GAdRIELc~-~L~~GGlTPS~g~i~~~~~~~~--ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~Gad 88 (256)
T 1twd_A 12 ECALTAQQNGADRVELCA-APKEGGLTPSLGVLKSVRQRVT--IPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFP 88 (256)
T ss_dssp HHHHHHHHTTCSEEEECB-CGGGTCBCCCHHHHHHHHHHCC--SCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEcC-CcccCCCCCCHHHHHHHHHHcC--CceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCC
Confidence 456778888988886553 11 111124555554433321 11111 111 11111111 235667777889999
Q ss_pred EEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015110 192 GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (413)
Q Consensus 192 ~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 231 (413)
++.+..-.. ....+.+.++++++.|+ ++++.+|-
T Consensus 89 GvV~G~Lt~----dg~iD~~~~~~Li~~a~--~~~vTFHR 122 (256)
T 1twd_A 89 GLVTGVLDV----DGNVDMPRMEKIMAAAG--PLAVTFHR 122 (256)
T ss_dssp EEEECCBCT----TSSBCHHHHHHHHHHHT--TSEEEECG
T ss_pred EEEEeeECC----CCCcCHHHHHHHHHHhC--CCcEEEEC
Confidence 987643221 23579999999998875 78999993
No 242
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=30.07 E-value=3.6e+02 Score=25.54 Aligned_cols=52 Identities=13% Similarity=0.082 Sum_probs=35.6
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh-cCCCEEEecCChhh
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG 236 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~e~~~~ 236 (413)
.+.++.+.+.|+..|.+-- .....++..+.++++..++ .+.++.+|++|...
T Consensus 183 ~~v~~~~~~~Ga~~i~l~D------TvG~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~G 235 (423)
T 3ivs_A 183 LSLYKAVDKIGVNRVGIAD------TVGCATPRQVYDLIRTLRGVVSCDIECHFHNDTG 235 (423)
T ss_dssp HHHHHHHHHHCCSEEEEEE------TTSCCCHHHHHHHHHHHHHHCSSEEEEEEBCTTS
T ss_pred HHHHHHHHHhCCCccccCC------ccCcCCHHHHHHHHHHHHhhcCCeEEEEECCCCc
Confidence 4455666778988765421 1235678888888876664 67899999988753
No 243
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=29.84 E-value=3.2e+02 Score=24.85 Aligned_cols=116 Identities=7% Similarity=-0.093 Sum_probs=59.8
Q ss_pred HHHHHHH-HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHH-hcCCCEEEe-----cCChhhchhhHhhccCcCCccc
Q 015110 180 SALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLA-RYKRPLLVH-----AEMEKGSERHVKLEDDTLDTRS 252 (413)
Q Consensus 180 ~~l~~l~-~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~-~~g~~v~~H-----~e~~~~~~~~~~~~~~~~~~~~ 252 (413)
+..+++. +.|++-|-+....+. .+....+.+++.+.++..+ ..++|+++- ..+.+.++..+...........
T Consensus 84 ~~A~~~v~~~GAdiIDIg~eStr-P~~~~vs~ee~~~~V~~v~~~~~vPlsIDg~~~~T~~~eV~eaAleagag~~~lIN 162 (323)
T 4djd_D 84 RWAQKCVAEYGADLIYLKLDGAD-PEGANHSVDQCVATVKEVLQAVGVPLVVVGCGDVEKDHEVLEAVAEAAAGENLLLG 162 (323)
T ss_dssp HHHHHHHHTTCCSEEEEECGGGC-TTTTCCCHHHHHHHHHHHHHHCCSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEE
T ss_pred HHHHHHHHHcCCCEEEEcCccCC-CCCCCCCHHHHHHHHHHHHhhCCceEEEECCCCCCCCHHHHHHHHHhcCCCCCeEE
Confidence 3444555 678887766432211 1222346666666666554 468888888 5555555555443310000000
Q ss_pred cccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCC
Q 015110 253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGD 313 (413)
Q Consensus 253 ~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~ 313 (413)
-... . ...+++.++.++ |+++.+.|....+..-++++.+++.|+
T Consensus 163 sv~~-~---------~~~~m~~laa~~-------g~~vVlmh~~d~~~~~~l~~~a~~~GI 206 (323)
T 4djd_D 163 NAEQ-E---------NYKSLTAACMVH-------KHNIIARSPLDINICKQLNILINEMNL 206 (323)
T ss_dssp EEBT-T---------BCHHHHHHHHHH-------TCEEEEECSSCHHHHHHHHHHHHTTTC
T ss_pred ECCc-c---------cHHHHHHHHHHh-------CCeEEEEccchHHHHHHHHHHHHHcCC
Confidence 0000 0 113445566654 888888886543233455566777776
No 244
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=29.69 E-value=3.1e+02 Score=25.42 Aligned_cols=52 Identities=15% Similarity=0.096 Sum_probs=36.4
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh-cC----CCEEEecCChhh
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR-YK----RPLLVHAEMEKG 236 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~-~g----~~v~~H~e~~~~ 236 (413)
.+.++.+.+.|+..+.+- +.....++.++.++++..++ .+ .++.+|++|...
T Consensus 160 ~~~~~~~~~~Ga~~i~l~------DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~G 216 (370)
T 3rmj_A 160 AEICGAVIEAGATTINIP------DTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLG 216 (370)
T ss_dssp HHHHHHHHHHTCCEEEEE------CSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTS
T ss_pred HHHHHHHHHcCCCEEEec------CccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCC
Confidence 455666777899876542 12345788888888887775 33 789999988653
No 245
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=29.50 E-value=3e+02 Score=24.37 Aligned_cols=109 Identities=17% Similarity=0.073 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCceEEEeC--CCC--------CCCCCCcHHHHHHHHHHHhcCCeeeEEeecee-------cCCchhhHHH
Q 015110 119 PSGTKAAAAGGITTLIDM--PLN--------SDPSTISTETLKLKVDAAEKRIYVDVGFWGGL-------VPENAYNASA 181 (413)
Q Consensus 119 ~~~~~~al~~GvTTv~d~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 181 (413)
....+.++..|++.+.-. . + ..+.....+.+....+.+.....--.+..... ..+.....+.
T Consensus 82 ~~~i~~a~~~G~~~V~i~~~~-S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~ 160 (295)
T 1ydn_A 82 MKGYEAAAAAHADEIAVFISA-SEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASV 160 (295)
T ss_dssp HHHHHHHHHTTCSEEEEEEES-CHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEEec-CHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHH
Q ss_pred HHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcC--CCEEEecCCh
Q 015110 182 LEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK--RPLLVHAEME 234 (413)
Q Consensus 182 l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g--~~v~~H~e~~ 234 (413)
++.+.+.|++.+.+. +.....++++..++++..++.= +++.+|++|.
T Consensus 161 ~~~~~~~G~d~i~l~------Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~ 209 (295)
T 1ydn_A 161 TEQLFSLGCHEVSLG------DTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDT 209 (295)
T ss_dssp HHHHHHHTCSEEEEE------ETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCT
T ss_pred HHHHHhcCCCEEEec------CCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCC
No 246
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=29.22 E-value=1.5e+02 Score=25.57 Aligned_cols=14 Identities=7% Similarity=-0.111 Sum_probs=8.9
Q ss_pred ChhcHHHHHHHHhc
Q 015110 346 DAANKEKLWEALMD 359 (413)
Q Consensus 346 ~~~~~~~L~~~l~~ 359 (413)
+.-+.+.+.++|++
T Consensus 227 G~id~~~~~~~L~~ 240 (281)
T 3u0h_A 227 GRIPLVPFLRGLYL 240 (281)
T ss_dssp SSSCHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHH
Confidence 44466777777764
No 247
>3mn5_S Protein spire, actin, alpha skeletal muscle; WH2 domain, actin complex, contractIle protein-protei complex; HET: ATP LAB; 1.50A {Drosophila melanogaster}
Probab=29.01 E-value=36 Score=19.65 Aligned_cols=23 Identities=26% Similarity=0.567 Sum_probs=17.1
Q ss_pred EEcCCCC-ChhcHHHHHHHHhcCC
Q 015110 339 KCAPPIR-DAANKEKLWEALMDGH 361 (413)
Q Consensus 339 k~~Pplr-~~~~~~~L~~~l~~G~ 361 (413)
++.||++ .+..|+.|.+.++.|.
T Consensus 5 qlgpp~~c~p~preql~esir~g~ 28 (38)
T 3mn5_S 5 QLGPPRMCEPSPREQLMESIRKGK 28 (38)
T ss_pred ccCCcccccCCcHHHHHHHHHccc
Confidence 3456665 4568999999999885
No 248
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=28.63 E-value=2.4e+02 Score=30.80 Aligned_cols=52 Identities=15% Similarity=0.061 Sum_probs=36.8
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh-cCCCEEEecCChhh
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG 236 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~e~~~~ 236 (413)
.+.++++.+.|+..+.+-- ......+..+.++++..++ .++++.+|++|...
T Consensus 712 ~~~~~~~~~~Ga~~i~l~D------T~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hnd~G 764 (1165)
T 2qf7_A 712 TNLAVELEKAGAHIIAVKD------MAGLLKPAAAKVLFKALREATGLPIHFHTHDTSG 764 (1165)
T ss_dssp HHHHHHHHHTTCSEEEEEE------TTCCCCHHHHHHHHHHHHHHCSSCEEEEECBTTS
T ss_pred HHHHHHHHHcCCCEEEEeC------ccCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence 4556677788998765421 1235678888888887764 68999999988764
No 249
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=28.57 E-value=2.9e+02 Score=24.62 Aligned_cols=65 Identities=12% Similarity=0.137 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhcHHHHHHHHhcCCcc----EEcCCCCCCC
Q 015110 300 SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID----MLSSDHSPTV 373 (413)
Q Consensus 300 ~~~~~i~~ak~~G~~v~~e~~p~~l~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i~----~i~sDh~p~~ 373 (413)
.+-++++.|++.|+.|-+|. -++--.++.....+ -.--+.++++-....+.. | +| .|||=|..|.
T Consensus 116 ~Tk~vv~~ah~~gvsVEaEl--G~vgg~ed~~~~~~----~~~~~T~Peea~~Fv~~T--g-vD~LAvaiGt~HG~Y~ 184 (286)
T 1gvf_A 116 LVKSVVDFCHSQDCSVEAEL--GRLGGVEDDMSVDA----ESAFLTDPQEAKRFVELT--G-VDSLAVAIGTAHGLYS 184 (286)
T ss_dssp HHHHHHHHHHHTTCEEEEEE--SCCC---------------CCSSCCHHHHHHHHHHH--C-CSEEEECSSCCSSCCS
T ss_pred HHHHHHHHHHHcCCEEEEEE--eeccCcccCccccc----ccccCCCHHHHHHHHHHH--C-CCEEEeecCccccCcC
Confidence 34567777888876665554 33322111110000 001234556666665553 4 44 3678887664
No 250
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=28.50 E-value=39 Score=18.88 Aligned_cols=21 Identities=5% Similarity=-0.039 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHHHhcCCCEEE
Q 015110 209 NASHIKEGLSVLARYKRPLLV 229 (413)
Q Consensus 209 ~~~~l~~~~~~A~~~g~~v~~ 229 (413)
++++++.+-++|++.++.+..
T Consensus 13 tpeelkklkeeakkanirvtf 33 (36)
T 2ki0_A 13 TPEELKKLKEEAKKANIRVTF 33 (36)
T ss_dssp CHHHHHHHHHHHHHHCCCCCB
T ss_pred CHHHHHHHHHHHHhccEEEEe
Confidence 789999999999999887643
No 251
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=28.37 E-value=88 Score=28.11 Aligned_cols=51 Identities=16% Similarity=0.129 Sum_probs=35.7
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh-c-CCCEEEecCChh
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR-Y-KRPLLVHAEMEK 235 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~-~-g~~v~~H~e~~~ 235 (413)
.+.++.+.+.|+..+.+.-. ....+++++.++++..++ . ++++.+|++|..
T Consensus 159 ~~~~~~~~~~Ga~~i~l~DT------~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~ 211 (298)
T 2cw6_A 159 AEVTKKFYSMGCYEISLGDT------IGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTY 211 (298)
T ss_dssp HHHHHHHHHTTCSEEEEEET------TSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTT
T ss_pred HHHHHHHHHcCCCEEEecCC------CCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 34455666789987765421 235788888888888775 3 478999998764
No 252
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=28.18 E-value=88 Score=30.64 Aligned_cols=82 Identities=18% Similarity=0.141 Sum_probs=52.7
Q ss_pred CCCHHHHHHHHHHHHhcCCC-EEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCC
Q 015110 207 MTNASHIKEGLSVLARYKRP-LLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPA 285 (413)
Q Consensus 207 ~~~~~~l~~~~~~A~~~g~~-v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~ 285 (413)
+++.+.+++.++..+.+++- ++.|..|... +..-.+..|...+. +..
T Consensus 158 f~~~~~ik~~id~mA~~KlN~lh~HltDdq~----------------wr~ei~~~P~Lt~~---------Ga~------- 205 (507)
T 2gjx_A 158 YLPLSSILDTLDVMAYNKLNVFHWHLVDDPS----------------FPYESFTFPELMRK---------GSY------- 205 (507)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECCCSSC----------------CCBCCSSCTHHHHH---------HSS-------
T ss_pred CCCHHHHHHHHHHHHHhCCceEEEEEecccC----------------eeeeccccchhhhc---------ccc-------
Confidence 46799999999999999885 6889876431 11122345654432 110
Q ss_pred CCceEEEEccCChhhHHHHHHHHHHCCCCEEEEc-ccccc
Q 015110 286 EGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET-CPHYL 324 (413)
Q Consensus 286 ~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~-~p~~l 324 (413)
.. ..+.-|.++-.++++.|+++|+.|..|+ +|-|.
T Consensus 206 ~~----~~~~YT~~di~eiv~yA~~rgI~VIPEID~PGH~ 241 (507)
T 2gjx_A 206 NP----VTHIYTAQDVKEVIEYARLRGIRVLAEFDTPGHT 241 (507)
T ss_dssp CT----TTSCBCHHHHHHHHHHHHHTTCEEEEECCCSSSC
T ss_pred CC----CCCCcCHHHHHHHHHHHHHcCCEEEECCCCcchH
Confidence 00 0122233367789999999999999998 66665
No 253
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=27.96 E-value=2e+02 Score=26.04 Aligned_cols=108 Identities=16% Similarity=0.100 Sum_probs=56.7
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHH----HHHHHHhcCCeeeEEeeceec-CCchhhHHHHHHHHHcC
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLK----LKVDAAEKRIYVDVGFWGGLV-PENAYNASALEALLNAG 189 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~G 189 (413)
.+.+....+..+.+||..++-++........+.+.-. ...+...++..+-. +.. ....+.++..+...+.|
T Consensus 31 ~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia----Gvg~~~t~~ai~la~~a~~~G 106 (318)
T 3qfe_A 31 LASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMA----GVGAHSTRQVLEHINDASVAG 106 (318)
T ss_dssp HHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE----ECCCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE----eCCCCCHHHHHHHHHHHHHcC
Confidence 3445666777889999999877621111222222222 22233333322211 222 23344566667777789
Q ss_pred CcEEEEeecCCCCCCCC-CCCHHHHHHHHH-HHHhcCCCEEEe
Q 015110 190 VLGLKSFMCPSGINDFP-MTNASHIKEGLS-VLARYKRPLLVH 230 (413)
Q Consensus 190 ~~~ik~~~~~~~~~~~~-~~~~~~l~~~~~-~A~~~g~~v~~H 230 (413)
++++-+.. +. .+. ..+.+.+.+-++ .|...++|+.+.
T Consensus 107 adavlv~~-P~---y~~kp~~~~~l~~~f~~ia~a~~lPiilY 145 (318)
T 3qfe_A 107 ANYVLVLP-PA---YFGKATTPPVIKSFFDDVSCQSPLPVVIY 145 (318)
T ss_dssp CSEEEECC-CC---C---CCCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCEEEEeC-Cc---ccCCCCCHHHHHHHHHHHHhhCCCCEEEE
Confidence 99886532 10 111 135666666554 445578999886
No 254
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=27.57 E-value=2e+02 Score=25.59 Aligned_cols=87 Identities=17% Similarity=0.135 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHhcCCCEEE-ecCC--hhhchhhHhhccCcCCccccccCCCCCch--HHHHHHHHHHHHHHhhcccCCCC
Q 015110 211 SHIKEGLSVLARYKRPLLV-HAEM--EKGSERHVKLEDDTLDTRSYSTYLKTRPP--SWEEAAIRELLTVAKDTRTDGPA 285 (413)
Q Consensus 211 ~~l~~~~~~A~~~g~~v~~-H~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~E~~~v~~~~~~a~~~~~~~~~ 285 (413)
+.+++.++.|+++|.++.+ |... ..... +... +.. ..-...+.++.+.+++.
T Consensus 114 ~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~----------~~~~-------~~~~~~~~~~~l~~l~~~a~~~------ 170 (316)
T 3qxb_A 114 QHLKRAIDMTAAMEVPATGMPFGSYSAADAL----------NPAR-------REEIYAIARDMWIELAAYAKRQ------ 170 (316)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCBBCCHHHHT----------CHHH-------HHHHHHHHHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCcCccccC----------Cccc-------HHHHHHHHHHHHHHHHHHHHhc------
Confidence 4688899999999988654 5432 00000 0000 000 01134677777788765
Q ss_pred CCce-EEEEc-------cCChhhHHHHHHHH---HHCCCCEEEEccc
Q 015110 286 EGAH-LHIVH-------LSDASSSLDLLMEA---KTNGDSITVETCP 321 (413)
Q Consensus 286 ~g~~-vhi~H-------~s~~~~~~~~i~~a---k~~G~~v~~e~~p 321 (413)
|++ +-+.. +.+.++..++++.. ...++.+..|++-
T Consensus 171 -Gv~~l~lE~~~~~~~~~~t~~~~~~l~~~v~~~~~~~vg~~lD~~H 216 (316)
T 3qxb_A 171 -GLSMLYVEPVPLATEFPSSAADAARLMADLDGRTEIPVRLLVDWGH 216 (316)
T ss_dssp -TCCEEEECCCSCTTBSSCSHHHHHHHHHHHTTTSSSCEEEEEEHHH
T ss_pred -CCeEEEEEecCCccccCCCHHHHHHHHHHHhccCCCCEEEEEEccc
Confidence 777 76654 23444667788777 3345566776643
No 255
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=27.10 E-value=98 Score=28.44 Aligned_cols=50 Identities=16% Similarity=0.099 Sum_probs=35.3
Q ss_pred HHHHHHHcCCcEEEEeecCCCCCCCCC---CCHHHHHHHHHHHHhcCCCEEEec
Q 015110 181 ALEALLNAGVLGLKSFMCPSGINDFPM---TNASHIKEGLSVLARYKRPLLVHA 231 (413)
Q Consensus 181 ~l~~l~~~G~~~ik~~~~~~~~~~~~~---~~~~~l~~~~~~A~~~g~~v~~H~ 231 (413)
.++++++.|++.+|+...++.. +.+. -..+.+.++.+.|+++|+|+.+..
T Consensus 115 sve~a~~~GADAVk~lv~~g~d-~~~e~~~~q~~~l~rv~~ec~~~GiPlllEi 167 (332)
T 3iv3_A 115 SIKRLKEAGADAVKFLLYYDVD-GDPQVNVQKQAYIERIGSECQAEDIPFFLEI 167 (332)
T ss_dssp CHHHHHHTTCSEEEEEEEECTT-SCHHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CHHHHHHcCCCEEEEEEEcCCC-chHHHHHHHHHHHHHHHHHHHHcCCceEEEE
Confidence 3677888999999987655321 1000 123578899999999999998864
No 256
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=27.01 E-value=27 Score=32.55 Aligned_cols=44 Identities=18% Similarity=0.036 Sum_probs=31.2
Q ss_pred HHHHHHhhcccCCCCCCceEEEEccCChhhHHHHHHHHHHCCCCEE-----EEcccccc
Q 015110 271 ELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSIT-----VETCPHYL 324 (413)
Q Consensus 271 ~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~-----~e~~p~~l 324 (413)
+++++++++ |+++|+.|.. ++.+.++.++++|.... +++++||+
T Consensus 172 ~~i~~A~~~-------g~~v~igH~~---~~~~~i~~a~~~G~~~itH~~~~~~~~~~~ 220 (376)
T 1o12_A 172 ELLLRLVKR-------DIVLSAGHSI---ATFEEFMKFYKEGVKRITHFPNGLKPLHHR 220 (376)
T ss_dssp GGGGGGGGG-------TCEEEECSBC---CCHHHHHHHHTTTCCEESSTTTTBCCCCSS
T ss_pred HHHHHHHHC-------CCEEEeecCc---cCHHHHHHHHHCCCCeEEecccCcCChhhc
Confidence 356667664 8999999964 34678888888887632 55667765
No 257
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=26.96 E-value=2.7e+02 Score=23.53 Aligned_cols=87 Identities=11% Similarity=0.085 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHhcCCCE-EEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCce
Q 015110 211 SHIKEGLSVLARYKRPL-LVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 289 (413)
Q Consensus 211 ~~l~~~~~~A~~~g~~v-~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~ 289 (413)
+.+++.++.|+++|.+. .+|.-........-. ... ...-.+.+.++.+.+++. |++
T Consensus 76 ~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~-------~~~---------~~~~~~~l~~l~~~a~~~-------gv~ 132 (254)
T 3ayv_A 76 RRLLFGLDRAAELGADRAVFHSGIPHGRTPEEA-------LER---------ALPLAEALGLVVRRARTL-------GVR 132 (254)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHH-------HHT---------HHHHHHHTHHHHHHHHHH-------TCE
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCCcccccccH-------HHH---------HHHHHHHHHHHHHHHhhc-------CCE
Confidence 56888999999999874 577532211000000 000 001134566777777765 788
Q ss_pred EEEEccC--ChhhHHHHHHHHHHCCCCEEEEccc
Q 015110 290 LHIVHLS--DASSSLDLLMEAKTNGDSITVETCP 321 (413)
Q Consensus 290 vhi~H~s--~~~~~~~~i~~ak~~G~~v~~e~~p 321 (413)
+-+.... +.++..++++... .++.+..|++-
T Consensus 133 l~lEn~~~~~~~~~~~l~~~v~-~~vg~~~D~~H 165 (254)
T 3ayv_A 133 LLLENSHEPHPEALRPVLEAHA-GELGFCFDAAH 165 (254)
T ss_dssp EEEECSSCSSGGGTHHHHHHHT-TSSEEEEEHHH
T ss_pred EEEcCCCCCCHHHHHHHHHhcC-cCEEEEEEchh
Confidence 8777654 4336677888776 67778888654
No 258
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=26.95 E-value=2.9e+02 Score=23.49 Aligned_cols=95 Identities=18% Similarity=0.119 Sum_probs=56.9
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHHcCCcEEE
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLK 194 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik 194 (413)
.+.....+++++.+|++.+.--. ++ | ...+.++...+.. ....+..+ . + ...+..++.++.|+..+-
T Consensus 24 ~~~a~~~a~al~~gGi~~iEvt~-~t-~--~a~~~I~~l~~~~-p~~~IGAG---T-V----lt~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 24 LVHAIPMAKALVAGGVHLLEVTL-RT-E--AGLAAISAIKKAV-PEAIVGAG---T-V----CTADDFQKAIDAGAQFIV 90 (217)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEET-TS-T--THHHHHHHHHHHC-TTSEEEEE---C-C----CSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeC-CC-c--cHHHHHHHHHHHC-CCCeEeec---c-c----cCHHHHHHHHHcCCCEEE
Confidence 45566778899999999775322 32 2 2345555544433 22222221 1 1 135678889999998763
Q ss_pred EeecCCCCCCCCCCCHHHHHHHHHHHHhcCC------CEEEecCChhh
Q 015110 195 SFMCPSGINDFPMTNASHIKEGLSVLARYKR------PLLVHAEMEKG 236 (413)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~------~v~~H~e~~~~ 236 (413)
. |.++++ +++.++++|+ ++.-=+.+.++
T Consensus 91 s----------P~~~~e----vi~~~~~~~v~~~~~~~~~PG~~TptE 124 (217)
T 3lab_A 91 S----------PGLTPE----LIEKAKQVKLDGQWQGVFLPGVATASE 124 (217)
T ss_dssp E----------SSCCHH----HHHHHHHHHHHCSCCCEEEEEECSHHH
T ss_pred e----------CCCcHH----HHHHHHHcCCCccCCCeEeCCCCCHHH
Confidence 2 335554 4556777888 88887766654
No 259
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=26.76 E-value=1.1e+02 Score=30.13 Aligned_cols=86 Identities=17% Similarity=0.182 Sum_probs=51.7
Q ss_pred CCCHHHHHHHHHHHHhcCCC-EEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCC
Q 015110 207 MTNASHIKEGLSVLARYKRP-LLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPA 285 (413)
Q Consensus 207 ~~~~~~l~~~~~~A~~~g~~-v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~ 285 (413)
+.+.+.+++.++....+++- ++.|..|... +..-.+..|...+..+ ...
T Consensus 170 f~~~~~ik~~id~ma~~KlN~lh~HltDdq~----------------wriei~~~P~Lt~~ga---------~~~----- 219 (512)
T 1jak_A 170 FFGVDEVKRYIDRVARYKYNKLHLHLSDDQG----------------WRIAIDSWPRLATYGG---------STE----- 219 (512)
T ss_dssp CCCHHHHHHHHHHHHTTTCCEEEEECBCSSC----------------BCBCCTTSTHHHHTTT---------SCC-----
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEeccCCC----------------ceehhhhhHHHHhhcC---------ccc-----
Confidence 56899999999999998885 6889876431 1112234554433211 000
Q ss_pred CCceEEEEccCChhhHHHHHHHHHHCCCCEEEEc-ccccc
Q 015110 286 EGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET-CPHYL 324 (413)
Q Consensus 286 ~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~-~p~~l 324 (413)
.+.. .-...|.. +-.++++.|+++|+.|..|+ +|-|.
T Consensus 220 ~~~~-~~g~YT~~-di~eiv~yA~~rgI~VIPEID~PGH~ 257 (512)
T 1jak_A 220 VGGG-PGGYYTKA-EYKEIVRYAASRHLEVVPEIDMPGHT 257 (512)
T ss_dssp TTSS-CCCCBCHH-HHHHHHHHHHHTTCEEEEECCCSSSC
T ss_pred cCCC-CCCCCCHH-HHHHHHHHHHHcCCEEEEccCCCchH
Confidence 0100 01223333 67788899999999999987 55444
No 260
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=26.30 E-value=1e+02 Score=30.33 Aligned_cols=86 Identities=15% Similarity=0.163 Sum_probs=52.4
Q ss_pred CCCHHHHHHHHHHHHhcCCC-EEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCC
Q 015110 207 MTNASHIKEGLSVLARYKRP-LLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPA 285 (413)
Q Consensus 207 ~~~~~~l~~~~~~A~~~g~~-v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~ 285 (413)
+++.+.+++.++..+.+++- ++.|..|... +..-.+..|...+..+ ...
T Consensus 195 f~~~~~ik~~id~mA~~KlN~lH~HltDdqg----------------wriei~~~P~Lt~~Ga---------~~~----- 244 (525)
T 3gh5_A 195 FFTVDEVKRQIDLASQYKINKFHMHLSDDQG----------------WRIEIKSWPDLIEIGS---------KGQ----- 244 (525)
T ss_dssp CCCHHHHHHHHHHHHTTTCCEEEEECBCSSC----------------BCBCCTTSTHHHHTTT---------SCC-----
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEeccCCc----------------cccccccchhhhhccC---------ccc-----
Confidence 46899999999999998885 6889876531 1122344554433211 000
Q ss_pred CCceEEEEccCChhhHHHHHHHHHHCCCCEEEEc-ccccc
Q 015110 286 EGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET-CPHYL 324 (413)
Q Consensus 286 ~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~-~p~~l 324 (413)
.+.. .-... |.++-.++++.|+++|+.|..|+ +|-|.
T Consensus 245 ~~~~-~~g~Y-T~~di~eIv~YA~~rgI~VIPEID~PGH~ 282 (525)
T 3gh5_A 245 VGGG-PGGYY-TQEQFKDIVSYAAERYIEVIPEIDMPGHT 282 (525)
T ss_dssp TTSS-CCCCB-CHHHHHHHHHHHHTTTCEEEEECCCSSSC
T ss_pred cCCC-CCCCc-CHHHHHHHHHHHHHcCCEEEEEecccchH
Confidence 0000 01123 33367788899999999999988 55444
No 261
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=26.24 E-value=3.4e+02 Score=24.01 Aligned_cols=51 Identities=8% Similarity=0.132 Sum_probs=32.1
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCC
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEM 233 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~e~ 233 (413)
+.++.+++.|+.++-+. +.+ +..+.++.+|-+++++.+.+. .++|.+++-.
T Consensus 26 ~lv~~li~~Gv~gl~~~-Gtt--GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~ 79 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSV-GTT--GESATLNHDEHADVVMMTLDLADGRIPVIAGTGA 79 (292)
T ss_dssp HHHHHHHHHTCCEEEES-STT--TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HHHHHHHHcCCCEEEEC-ccc--cchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC
Confidence 45555667888887542 111 345567888777777766642 4688888643
No 262
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=26.17 E-value=4.2e+02 Score=26.07 Aligned_cols=52 Identities=17% Similarity=0.208 Sum_probs=36.5
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCC------CCCCCCCHHHHHHHHHHHHhcCCCEEEe
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGI------NDFPMTNASHIKEGLSVLARYKRPLLVH 230 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~------~~~~~~~~~~l~~~~~~A~~~g~~v~~H 230 (413)
.+..+.|++.|++++|+.+.+..+ .+........+.++.+.|+++|+++..-
T Consensus 333 ~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIAD 390 (556)
T 4af0_A 333 REQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIAD 390 (556)
T ss_dssp HHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEE
T ss_pred HHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEec
Confidence 466778889999999998766321 0111222346778888899999998875
No 263
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=25.98 E-value=76 Score=28.75 Aligned_cols=51 Identities=12% Similarity=0.036 Sum_probs=34.8
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 231 (413)
..+++.++.|++.+++...+.. +....-..+++.++.+.|+++|+++.+-+
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~-d~~~~~~~~~i~~v~~~~~~~G~p~lv~~ 162 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRS-DEDAQQRLNMVKEFNELCHSNGLLSIIEP 162 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECT-TSCHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhHHHHHHcCCCEEEEEEEcCC-CccHHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 4577888999999986543321 00011123678888999999999988874
No 264
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=25.72 E-value=2.3e+02 Score=24.36 Aligned_cols=22 Identities=18% Similarity=0.116 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHhcCCCEEEecC
Q 015110 211 SHIKEGLSVLARYKRPLLVHAE 232 (413)
Q Consensus 211 ~~l~~~~~~A~~~g~~v~~H~e 232 (413)
+.|.++.+.|+++|+.+.+|.-
T Consensus 131 ~~l~~l~~~a~~~Gv~l~lE~~ 152 (269)
T 3ngf_A 131 ENFRYAADKLAPHGITVLVEPL 152 (269)
T ss_dssp HHHHHHHHHHGGGTCEEEECCC
T ss_pred HHHHHHHHHHHHcCCEEEEeeC
Confidence 4566677777788888888763
No 265
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=25.08 E-value=3.5e+02 Score=23.79 Aligned_cols=46 Identities=20% Similarity=0.180 Sum_probs=26.7
Q ss_pred chhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 015110 175 NAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK 224 (413)
Q Consensus 175 ~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g 224 (413)
.....+.++.+.+.|++.+.+.+-++. |..+...++++.+.|-+.|
T Consensus 33 ~~~~~~~~~~l~~~GaD~iElGiPfSD----P~aDGpvIq~a~~rAL~~G 78 (271)
T 3nav_A 33 PEQSLAIMQTLIDAGADALELGMPFSD----PLADGPTIQGANLRALAAK 78 (271)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCCCC----GGGCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCC----CCCCCHHHHHHHHHHHHcC
Confidence 344567788888899998887654432 3334444554444333333
No 266
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=24.83 E-value=79 Score=31.51 Aligned_cols=81 Identities=14% Similarity=0.120 Sum_probs=52.1
Q ss_pred CCCHHHHHHHHHHHHhcCCC-EEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCC
Q 015110 207 MTNASHIKEGLSVLARYKRP-LLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPA 285 (413)
Q Consensus 207 ~~~~~~l~~~~~~A~~~g~~-v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~ 285 (413)
+++.+.+++.++..+.+++- ++.|..|... +..-.+..|...+. +.. .
T Consensus 200 f~~~~~ik~~id~mA~~KlN~lH~HltDdqg----------------wrlei~~~P~Lt~~---------Ga~----~-- 248 (572)
T 3ozo_A 200 YYSIESIKRTIEAMAAVKLNTFHWHITDSQS----------------FPFVTTKRPNLYKF---------GAL----S-- 248 (572)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECCCSSC----------------CCBCCSSSHHHHHH---------HSS----S--
T ss_pred CCCHHHHHHHHHHHHHcCCceEEEEeecCcC----------------ceeccccCcchhcc---------CCc----C--
Confidence 46899999999999998885 6889876531 11112344543321 110 0
Q ss_pred CCceEEEEccCChhhHHHHHHHHHHCCCCEEEEc-ccccc
Q 015110 286 EGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET-CPHYL 324 (413)
Q Consensus 286 ~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~-~p~~l 324 (413)
.+ ...|.. +-.++++.|+++|+.|..|+ +|.|.
T Consensus 249 ~~-----~~YT~~-di~eiv~yA~~rgI~VIPEId~PGH~ 282 (572)
T 3ozo_A 249 PQ-----KVYTKA-AIREVVRFGLERGVRVLPEFDAPAHV 282 (572)
T ss_dssp SS-----SCBCHH-HHHHHHHHHHHTTCEEEEEEEESSSC
T ss_pred CC-----CCcCHH-HHHHHHHHHHHhCCceeeeeccchHH
Confidence 01 123333 77789999999999999988 66565
No 267
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=24.17 E-value=3.3e+02 Score=23.15 Aligned_cols=36 Identities=22% Similarity=0.346 Sum_probs=24.3
Q ss_pred CceEEEEccCChhhHHHHHHHHHHCCCCEEEEcccc
Q 015110 287 GAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPH 322 (413)
Q Consensus 287 g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~ 322 (413)
|+.....|....+...+.++..|+.|..+-..+.|.
T Consensus 87 Gad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~ 122 (228)
T 3ovp_A 87 GANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG 122 (228)
T ss_dssp TCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCC
Confidence 555556676432145678888888998887777764
No 268
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=23.74 E-value=2.2e+02 Score=28.08 Aligned_cols=98 Identities=16% Similarity=0.144 Sum_probs=53.1
Q ss_pred CCCHHHHHHHHHHHHhcCCC-EEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCC
Q 015110 207 MTNASHIKEGLSVLARYKRP-LLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPA 285 (413)
Q Consensus 207 ~~~~~~l~~~~~~A~~~g~~-v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~ 285 (413)
+++.+.+++.++..+.+++- ++.|..|... +..-.++.|...+..+-+.--.+.... ....
T Consensus 151 f~~~~~ik~~ID~MA~~KlN~lH~HltDdqg----------------wriei~~yP~Lt~~Ga~r~~t~~g~~~--~~~~ 212 (543)
T 3rcn_A 151 FMPKDNVLRFIEVMAMHKLNVLHLHLTDDQG----------------WRMQINRYPKLTETGAWRRESSLGSWR--AGVF 212 (543)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECEETTE----------------ECBCCSSCTHHHHTTTEESCCBSSCGG--GCCB
T ss_pred ccCHHHHHHHHHHHHHcCCcEEEeecccccC----------------cchhcccchhhhhhccccccccccccc--cccc
Confidence 56899999999999998885 6899765431 111123444433211000000000000 0000
Q ss_pred CCceEEEEccCChhhHHHHHHHHHHCCCCEEEEc-ccccc
Q 015110 286 EGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET-CPHYL 324 (413)
Q Consensus 286 ~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~-~p~~l 324 (413)
.+. -+-.+.|.. +-.++++.|+++|+.|..|+ +|-|.
T Consensus 213 ~~~-~~~g~YT~~-di~eIv~YA~~rgI~VIPEID~PGH~ 250 (543)
T 3rcn_A 213 DGR-PHGGFYTQD-DLREIVAFAADRHITVIPEIDVPGHS 250 (543)
T ss_dssp CCC-CEECCBCHH-HHHHHHHHHHHTTCEEEEECCCSSSC
T ss_pred cCC-ccCCCcCHH-HHHHHHHHHHHcCCEEeeeeccchhH
Confidence 011 123334444 77789999999999999998 55444
No 269
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=23.70 E-value=1.9e+02 Score=28.28 Aligned_cols=81 Identities=16% Similarity=0.049 Sum_probs=51.5
Q ss_pred CCCHHHHHHHHHHHHhcCCC-EEEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCC
Q 015110 207 MTNASHIKEGLSVLARYKRP-LLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPA 285 (413)
Q Consensus 207 ~~~~~~l~~~~~~A~~~g~~-v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~ 285 (413)
+++.+.+++.++..+.+++- ++.|..|... +..-.+..|...+. +..
T Consensus 164 f~~~~~ik~~id~ma~~KlN~lh~HltDdq~----------------wr~e~~~~P~Lt~~---------Ga~------- 211 (507)
T 1now_A 164 YLPVKIILKTLDAMAFNKFNVLHWHIVDDQS----------------FPYQSITFPELSNK---------GSY------- 211 (507)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECCCSSC----------------CCBCCSSCHHHHHH---------HSS-------
T ss_pred CCCHHHHHHHHHHHHHhCCcEEEEeeccCcc----------------ceeeccchhhhhcc---------cCc-------
Confidence 46899999999999999885 6889876531 11112344543321 110
Q ss_pred CCceEEEEccCChhhHHHHHHHHHHCCCCEEEEc-ccccc
Q 015110 286 EGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET-CPHYL 324 (413)
Q Consensus 286 ~g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~-~p~~l 324 (413)
.. .+.-|.++-.++++.|+++|+.|..|+ +|-|.
T Consensus 212 ~~-----~~~YT~~di~eiv~yA~~rgI~VIPEID~PGH~ 246 (507)
T 1now_A 212 SL-----SHVYTPNDVRMVIEYARLRGIRVLPEFDTPGHT 246 (507)
T ss_dssp ST-----TSCBCHHHHHHHHHHHHHTTCEEEEEEEESSSC
T ss_pred CC-----CCCCCHHHHHHHHHHHHHcCCEEEEccCCchhH
Confidence 00 122233366788999999999999987 56554
No 270
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=23.60 E-value=1.6e+02 Score=28.23 Aligned_cols=53 Identities=9% Similarity=0.049 Sum_probs=41.1
Q ss_pred HHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhH
Q 015110 181 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHV 241 (413)
Q Consensus 181 ~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~ 241 (413)
++.++...|++.+-+... ..+++.+.++++.|+++|+.+.+-+++.++.....
T Consensus 122 Qi~ea~~~GAD~ILLi~a--------~l~~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~ 174 (452)
T 1pii_A 122 QIYLARYYQADACLLMLS--------VLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAI 174 (452)
T ss_dssp HHHHHHHTTCSEEEEETT--------TCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEcc--------cCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 466677899999866432 35778999999999999999888887777655443
No 271
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=23.58 E-value=1.6e+02 Score=25.31 Aligned_cols=73 Identities=10% Similarity=0.015 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHhcCCCE-EEecCChhhchhhHhhccCcCCccccccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCce
Q 015110 211 SHIKEGLSVLARYKRPL-LVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 289 (413)
Q Consensus 211 ~~l~~~~~~A~~~g~~v-~~H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~ 289 (413)
+.+++.++.|+++|.+. .+|...... . ..+.++.+++++. |++
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~~~g~~~~-----------------------~------~~l~~l~~~a~~~-------Gv~ 127 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKVSLGLLPE-----------------------Q------PDLAALGRRLARH-------GLQ 127 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEEEEECCCS-----------------------S------CCHHHHHHHHTTS-------SCE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCc-----------------------H------HHHHHHHHHHHhc-------CCE
Confidence 56888888888888864 456422110 0 0356667777754 787
Q ss_pred EEEEccCC-----hhhHHHHHHHHHHCC--CCEEEEc
Q 015110 290 LHIVHLSD-----ASSSLDLLMEAKTNG--DSITVET 319 (413)
Q Consensus 290 vhi~H~s~-----~~~~~~~i~~ak~~G--~~v~~e~ 319 (413)
+-+..... .++..++++..+..+ +.+..|+
T Consensus 128 l~lEn~~~~~~~~~~~~~~ll~~v~~~~~~vg~~~D~ 164 (264)
T 1yx1_A 128 LLVENDQTPQGGRIEVLERFFRLAERQQLDLAMTFDI 164 (264)
T ss_dssp EEEECCSSHHHHCHHHHHHHHHHHHHTTCSEEEEEET
T ss_pred EEEecCCCCCCCCHHHHHHHHHHHHhcCCCeEEEEeh
Confidence 77765432 224456666664433 4566665
No 272
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=23.58 E-value=42 Score=34.35 Aligned_cols=18 Identities=22% Similarity=0.073 Sum_probs=14.0
Q ss_pred HHHHhcCCccEEcCCCCC
Q 015110 354 WEALMDGHIDMLSSDHSP 371 (413)
Q Consensus 354 ~~~l~~G~i~~i~sDh~p 371 (413)
.+.++.|...+|+||...
T Consensus 584 ~~ll~~Gv~VsLgTDdp~ 601 (701)
T 2a3l_A 584 PVFFLRGLNVSLSTDDPL 601 (701)
T ss_dssp HHHHHTTCCEEECCBCHH
T ss_pred HHHHHCCCcEEEeCCCcc
Confidence 344667999999999853
No 273
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=23.39 E-value=4e+02 Score=23.85 Aligned_cols=98 Identities=13% Similarity=0.100 Sum_probs=62.3
Q ss_pred hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh----cCCCEEEecCChhhchhhHhhc-cCcCCccc
Q 015110 178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR----YKRPLLVHAEMEKGSERHVKLE-DDTLDTRS 252 (413)
Q Consensus 178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~----~g~~v~~H~e~~~~~~~~~~~~-~~~~~~~~ 252 (413)
.++..+++++.|+.-+-+.+.. .+....+++.+++...+. .++|+++-..+.+.++.++... | . ....
T Consensus 39 a~~~A~~~v~~GAdiIDIg~g~-----~~v~~~eem~rvv~~i~~~~~~~~vpisIDT~~~~V~eaaL~~~~G-a-~iIN 111 (300)
T 3k13_A 39 ALSIARQQVEDGALVIDVNMDD-----GLLDARTEMTTFLNLIMSEPEIARVPVMIDSSKWEVIEAGLKCLQG-K-SIVN 111 (300)
T ss_dssp HHHHHHHHHHTTCSEEEEECCC-----TTSCHHHHHHHHHHHHHTCHHHHTSCEEEECSCHHHHHHHHHHCSS-C-CEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCC-----CCCCHHHHHHHHHHHHHHhhhcCCCeEEEeCCCHHHHHHHHHhcCC-C-CEEE
Confidence 4566777788999988776532 123356788888887763 5899999999988887777632 2 1 1111
Q ss_pred cccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEcc
Q 015110 253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHL 295 (413)
Q Consensus 253 ~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~ 295 (413)
-..+. .. ...+.+++.+++++ |+++.+.|.
T Consensus 112 dIs~~-~~-----d~~~~~~~~l~a~~-------ga~vV~mh~ 141 (300)
T 3k13_A 112 SISLK-EG-----EEVFLEHARIIKQY-------GAATVVMAF 141 (300)
T ss_dssp EECST-TC-----HHHHHHHHHHHHHH-------TCEEEEESE
T ss_pred eCCcc-cC-----ChhHHHHHHHHHHh-------CCeEEEEee
Confidence 00010 00 12344667777765 889999997
No 274
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=22.85 E-value=4.4e+02 Score=24.07 Aligned_cols=107 Identities=14% Similarity=0.104 Sum_probs=56.9
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHH-HhcCCeeeEEeeceecC-CchhhHHHHHHHHHcCCcE
Q 015110 115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDA-AEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGVLG 192 (413)
Q Consensus 115 ~e~~~~~~~~al~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~G~~~ 192 (413)
.+.+....+..+.+||..++-.+........+.+.....++. ..++.. ...+... ...+.++..+...+.|+++
T Consensus 46 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvp----ViaGvg~~st~eai~la~~A~~~Gada 121 (344)
T 2hmc_A 46 FDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIP----VIVGTGAVNTASAVAHAVHAQKVGAKG 121 (344)
T ss_dssp HHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCC----EEEECCCSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCc----EEEecCCCCHHHHHHHHHHHHhcCCCE
Confidence 344556677778999999887752111122233222222222 222221 1222222 2244566666667789998
Q ss_pred EEEeecCCCCCCCCC-CCHHHHHHHHHH-HH-hcCCCEEEe
Q 015110 193 LKSFMCPSGINDFPM-TNASHIKEGLSV-LA-RYKRPLLVH 230 (413)
Q Consensus 193 ik~~~~~~~~~~~~~-~~~~~l~~~~~~-A~-~~g~~v~~H 230 (413)
+-+.. + .+.. .+.+.+.+-++. |. .-++|+.+.
T Consensus 122 vlv~~-P----~y~~~~s~~~l~~~f~~IA~aa~~lPiilY 157 (344)
T 2hmc_A 122 LMVIP-R----VLSRGSVIAAQKAHFKAILSAAPEIPAVIY 157 (344)
T ss_dssp EEECC-C----CSSSTTCHHHHHHHHHHHHHHSTTSCEEEE
T ss_pred EEECC-C----ccCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 86532 1 1122 366777766655 44 468998886
No 275
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=22.82 E-value=4.3e+02 Score=23.94 Aligned_cols=111 Identities=12% Similarity=0.072 Sum_probs=56.8
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcC------C--CEEEecCChhh---------chhhHh
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK------R--PLLVHAEMEKG---------SERHVK 242 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g------~--~v~~H~e~~~~---------~~~~~~ 242 (413)
+.+.++.+.|+..+-+. ..+.+...++++.|+++. + -+-+|...... +...+.
T Consensus 56 ~vl~rA~~aGV~~ii~~----------g~~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~l~~L~~l~~ 125 (325)
T 3ipw_A 56 VVLQRAERNGLSHIIIT----------SGCLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCE 125 (325)
T ss_dssp HHHHHHHHTTEEEEEEC----------CCSHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEEc----------cCCHHHHHHHHHHHHHCCCcccceEEEEEEECcchhhcCCchHHHHHHHHHHh
Confidence 45666667777655331 246777888888888775 2 23456532211 111111
Q ss_pred hccC---cCCccccccCC-CCCchHHHHHHHHHHHHHHhh-cccCCCCCCceEEEEccCCh-hhHHHHHHHH
Q 015110 243 LEDD---TLDTRSYSTYL-KTRPPSWEEAAIRELLTVAKD-TRTDGPAEGAHLHIVHLSDA-SSSLDLLMEA 308 (413)
Q Consensus 243 ~~~~---~~~~~~~~~~~-~~~p~~~E~~~v~~~~~~a~~-~~~~~~~~g~~vhi~H~s~~-~~~~~~i~~a 308 (413)
...+ ..|....-.+. ...|...+...+.+-+++|++ + +.|+ +.|.-.+ ++.++++++.
T Consensus 126 ~~~~~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~-------~lPv-iiH~r~A~~d~l~iL~~~ 189 (325)
T 3ipw_A 126 KNIDKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYP-------YLPF-FFHCRKSWSDLCQLNKEL 189 (325)
T ss_dssp HTGGGEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCT-------TCCE-EEEEESCHHHHHHHHHHT
T ss_pred cCCCCEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhh-------CCeE-EEEeCchHHHHHHHHHhc
Confidence 1000 01111111111 223555667788888999998 6 6664 5665432 2555666554
No 276
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=22.50 E-value=2.9e+02 Score=23.83 Aligned_cols=113 Identities=10% Similarity=0.047 Sum_probs=52.3
Q ss_pred chHHHHHHHHhCCceEEEeCCCCC-CCCCCcHHHHHHHHHHHhcCCe--eeEEeeceec-CCc-hhhHHHHHH----HHH
Q 015110 117 GFPSGTKAAAAGGITTLIDMPLNS-DPSTISTETLKLKVDAAEKRIY--VDVGFWGGLV-PEN-AYNASALEA----LLN 187 (413)
Q Consensus 117 ~~~~~~~~al~~GvTTv~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~-~~~~~~l~~----l~~ 187 (413)
++....+.+.+.|+..+--..... .....+...++...+....... ..+..+.... +.. ...++.+++ ..+
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~ 95 (286)
T 3dx5_A 16 SFTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANW 95 (286)
T ss_dssp CHHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 456677888899999885421000 0000112334444444333221 1121111111 111 112233333 334
Q ss_pred cCCcEEEEeecCCCCCCCCCCCHHH-------HHHHHHHHHhcCCCEEEecC
Q 015110 188 AGVLGLKSFMCPSGINDFPMTNASH-------IKEGLSVLARYKRPLLVHAE 232 (413)
Q Consensus 188 ~G~~~ik~~~~~~~~~~~~~~~~~~-------l~~~~~~A~~~g~~v~~H~e 232 (413)
-|+..+.++..... ....+.+. +.++.+.|+++|+.+.+|..
T Consensus 96 lG~~~v~~~~g~~~---~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 144 (286)
T 3dx5_A 96 FKTNKIRTFAGQKG---SADFSQQERQEYVNRIRMICELFAQHNMYVLLETH 144 (286)
T ss_dssp HTCCEEEECSCSSC---GGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hCCCEEEEcCCCCC---cccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecC
Confidence 68877766432211 11123332 45667788899999999974
No 277
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=22.05 E-value=2.1e+02 Score=24.98 Aligned_cols=122 Identities=16% Similarity=0.092 Sum_probs=59.9
Q ss_pred hhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCcccccc
Q 015110 176 AYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYST 255 (413)
Q Consensus 176 ~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~ 255 (413)
....+.+..+.+.|++-+.+.+-++. |..+-..++++.+.|-+.|..+.--.+ .+..-. ..-+.-.+.
T Consensus 28 ~~t~~~~~~l~~~GaD~iElGiPfSD----P~aDGpvIq~a~~rAL~~g~~~~~~~~-------~~~~~r-~~~Pivlm~ 95 (252)
T 3tha_A 28 QTSEAFLQRLDQSPIDILELGVAYSD----PIADGEIIADAAKIALDQGVDIHSVFE-------LLARIK-TKKALVFMV 95 (252)
T ss_dssp HHHHHHHHTGGGSSCSEEEEECCCSC----CCSCCCHHHHHHHHHHHTTCCHHHHHH-------HHHHCC-CSSEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCC----CCCCcHHHHHHHHHHHHCCCCHHHHHH-------HHHHHh-cCCCEEEEe
Confidence 34556677777889998888654442 444555666666555555432110000 000000 000111111
Q ss_pred CCCCCchHHHHHHHHHHHHHHhhcccCCCCCCce-EEEEccCChhhHHHHHHHHHHCCCCEEEEccc
Q 015110 256 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH-LHIVHLSDASSSLDLLMEAKTNGDSITVETCP 321 (413)
Q Consensus 256 ~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~-vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p 321 (413)
|++ | ....++++.++.+++. |+. +.+.++-.. +.-++.+.+++.|+....=+.|
T Consensus 96 Y~N--~--i~~~G~e~F~~~~~~a-------GvdG~IipDLP~e-E~~~~~~~~~~~Gl~~I~lvaP 150 (252)
T 3tha_A 96 YYN--L--IFSYGLEKFVKKAKSL-------GICALIVPELSFE-ESDDLIKECERYNIALITLVSV 150 (252)
T ss_dssp CHH--H--HHHHCHHHHHHHHHHT-------TEEEEECTTCCGG-GCHHHHHHHHHTTCEECEEEET
T ss_pred ccC--H--HHHhhHHHHHHHHHHc-------CCCEEEeCCCCHH-HHHHHHHHHHHcCCeEEEEeCC
Confidence 110 1 1123566667666664 332 455566554 6667777788888765433344
No 278
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=22.02 E-value=2e+02 Score=25.40 Aligned_cols=51 Identities=16% Similarity=0.100 Sum_probs=37.6
Q ss_pred HHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchh
Q 015110 181 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER 239 (413)
Q Consensus 181 ~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~ 239 (413)
.+.+....|++++-+... ..+++++.++.+.++++|+.+.+=+.+.+++..
T Consensus 127 qv~~A~~~GAD~VlLi~a--------~l~~~~l~~l~~~a~~lGl~~lvev~t~ee~~~ 177 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVA--------ALEQSVLVSMLDRTESLGMTALVEVHTEQEADR 177 (272)
T ss_dssp HHHHHHHTTCSEEEEEGG--------GSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred HHHHHHHcCCCEEEEecc--------cCCHHHHHHHHHHHHHCCCcEEEEcCCHHHHHH
Confidence 467777899999876421 356788999999999999987665656555443
No 279
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=22.00 E-value=1.4e+02 Score=27.80 Aligned_cols=29 Identities=14% Similarity=0.092 Sum_probs=24.3
Q ss_pred CCCHHHHHHHHHHHHhcCCC-EEEecCChh
Q 015110 207 MTNASHIKEGLSVLARYKRP-LLVHAEMEK 235 (413)
Q Consensus 207 ~~~~~~l~~~~~~A~~~g~~-v~~H~e~~~ 235 (413)
+.+.+.++++++..+.+++- ++.|..|..
T Consensus 29 f~~~~~ik~~id~mA~~KlN~lH~HltDdq 58 (367)
T 1yht_A 29 FYSPEVIKSFIDTISLSGGNFLHLHFSDHE 58 (367)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECBSSS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEEcCC
Confidence 57899999999999999885 688987753
No 280
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=21.98 E-value=3.6e+02 Score=22.81 Aligned_cols=115 Identities=12% Similarity=-0.032 Sum_probs=56.1
Q ss_pred chHHHHHHHHhCCceEEEeCCCCC--CC-CCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHH----HHcC
Q 015110 117 GFPSGTKAAAAGGITTLIDMPLNS--DP-STISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEAL----LNAG 189 (413)
Q Consensus 117 ~~~~~~~~al~~GvTTv~d~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l----~~~G 189 (413)
++....+.+.+.|+..+--..... .+ .....+.++..++... -....+.....+.....+.++.+++. .+-|
T Consensus 20 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~g-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 98 (272)
T 2q02_A 20 SIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYG-LEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVG 98 (272)
T ss_dssp CHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTT-CEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcC-CeEEechhhhccCCcHHHHHHHHHHHHHHHHHhC
Confidence 355667778889999875432111 11 1123444444333221 11112222111222222233333333 3468
Q ss_pred CcEEEEeecCCCCCCCCCCC-HHHHHHHHHHHHhcCCCEEEecCC
Q 015110 190 VLGLKSFMCPSGINDFPMTN-ASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 190 ~~~ik~~~~~~~~~~~~~~~-~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
+..+.+.....+. .....- .+.++++.+.|+++|+.+.+|...
T Consensus 99 ~~~v~~~~g~~~~-~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~ 142 (272)
T 2q02_A 99 ARALVLCPLNDGT-IVPPEVTVEAIKRLSDLFARYDIQGLVEPLG 142 (272)
T ss_dssp CSEEEECCCCSSB-CCCHHHHHHHHHHHHHHHHTTTCEEEECCCC
T ss_pred CCEEEEccCCCch-hHHHHHHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 8777653221110 000112 677889999999999999998754
No 281
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=21.87 E-value=92 Score=28.11 Aligned_cols=49 Identities=4% Similarity=0.080 Sum_probs=33.9
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEe
Q 015110 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVH 230 (413)
Q Consensus 180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 230 (413)
.++++.++.|++.+.+...... .......+++.++++.|+++|+++.+-
T Consensus 129 ~~ve~Av~~GAdaV~~~i~~Gs--~~~~~~l~~i~~v~~~a~~~GlpvIie 177 (295)
T 3glc_A 129 LSMDDAVRLNSCAVAAQVYIGS--EYEHQSIKNIIQLVDAGMKVGMPTMAV 177 (295)
T ss_dssp SCHHHHHHTTCSEEEEEECTTS--TTHHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHCCCCEEEEEEECCC--CcHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 4678888999998877554321 111123446778999999999999874
No 282
>2dfa_A Hypothetical UPF0271 protein TTHB195; lactam utilization protein, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} SCOP: c.6.2.5
Probab=21.70 E-value=4e+02 Score=23.20 Aligned_cols=29 Identities=10% Similarity=0.043 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEecCChhh
Q 015110 208 TNASHIKEGLSVLARYKRPLLVHAEMEKG 236 (413)
Q Consensus 208 ~~~~~l~~~~~~A~~~g~~v~~H~e~~~~ 236 (413)
-++..+.+.++.|+++|+.+-.|..-++.
T Consensus 40 GDp~~M~~tv~lA~~~gV~IGAHPgypDl 68 (250)
T 2dfa_A 40 GSPGRILEAVRLAKAHGVAVGAHPGFPDL 68 (250)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECCCSCT
T ss_pred CCHHHHHHHHHHHHHcCCeEecCCCCCcc
Confidence 47889999999999999999999876665
No 283
>1xw8_A UPF0271 protein YBGL; NESG, northeast structural genomics consortium, structural genomics, protein structure initiative, PSI, X-RAY; 2.00A {Escherichia coli} SCOP: c.6.2.5
Probab=21.64 E-value=4e+02 Score=23.20 Aligned_cols=30 Identities=7% Similarity=0.064 Sum_probs=24.9
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEecCChhhc
Q 015110 208 TNASHIKEGLSVLARYKRPLLVHAEMEKGS 237 (413)
Q Consensus 208 ~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~ 237 (413)
-++..+.+.++.|+++|+.+-.|..-++..
T Consensus 35 GDp~~M~~Tv~lA~~~gV~IGAHPgypDl~ 64 (252)
T 1xw8_A 35 GDAQIMQACVREAIKNGVAIGAHPSFPDRE 64 (252)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECCCC---
T ss_pred CCHHHHHHHHHHHHHcCCeeecCCCCCccc
Confidence 478899999999999999999999777653
No 284
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=21.40 E-value=4.2e+02 Score=23.30 Aligned_cols=117 Identities=13% Similarity=0.060 Sum_probs=63.0
Q ss_pred HHHHHHHHHcCCcEEEEeecC-C-CC-CCC-C-CCCHHHHHHHHHHHHhcCCCE-EEecCChhhchhhHhhccCcCCccc
Q 015110 179 ASALEALLNAGVLGLKSFMCP-S-GI-NDF-P-MTNASHIKEGLSVLARYKRPL-LVHAEMEKGSERHVKLEDDTLDTRS 252 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~-~-~~-~~~-~-~~~~~~l~~~~~~A~~~g~~v-~~H~e~~~~~~~~~~~~~~~~~~~~ 252 (413)
.+.++.+.+.|..++.++... . +. .+. + ..+.+...++.+.++++|+.+ .+|+...-. ..++
T Consensus 39 ~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~----------~~~~-- 106 (305)
T 3obe_A 39 PNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLTPSLR----------EYTK-- 106 (305)
T ss_dssp HHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCCCSCC----------CCCG--
T ss_pred HHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEeecccccc----------ccch--
Confidence 456677778899999886431 0 00 000 0 011224566667778899876 567532100 0000
Q ss_pred cccCCCCCchHHHHHHHHHHHHHHhhcccCCCCCCceEEEEccC----ChhhHH--------HHHHHHHHCCCCEEEEcc
Q 015110 253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS----DASSSL--------DLLMEAKTNGDSITVETC 320 (413)
Q Consensus 253 ~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s----~~~~~~--------~~i~~ak~~G~~v~~e~~ 320 (413)
.........+++.+++|+.. |++..+++.. +. +.+ ++.+.+++.|+.+..|..
T Consensus 107 -------~~~~~~~~~~~~~i~~A~~l-------G~~~v~~~~~~~~~~~-~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~ 171 (305)
T 3obe_A 107 -------ENMPKFDEFWKKATDIHAEL-------GVSCMVQPSLPRIENE-DDAKVVSEIFNRAGEITKKAGILWGYHNH 171 (305)
T ss_dssp -------GGHHHHHHHHHHHHHHHHHH-------TCSEEEECCCCCCSSH-HHHHHHHHHHHHHHHHHHTTTCEEEEECC
T ss_pred -------hhHHHHHHHHHHHHHHHHHc-------CCCEEEeCCCCCCCCH-HHHHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 00011235678888888876 7776665532 11 122 344557788998888765
Q ss_pred cc
Q 015110 321 PH 322 (413)
Q Consensus 321 p~ 322 (413)
+.
T Consensus 172 ~~ 173 (305)
T 3obe_A 172 SN 173 (305)
T ss_dssp SG
T ss_pred cc
Confidence 53
No 285
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=20.95 E-value=3.6e+02 Score=22.85 Aligned_cols=24 Identities=17% Similarity=0.058 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHhcCCCEEEecCC
Q 015110 210 ASHIKEGLSVLARYKRPLLVHAEM 233 (413)
Q Consensus 210 ~~~l~~~~~~A~~~g~~v~~H~e~ 233 (413)
.+.+.++.+.|+++|+.+.+|..+
T Consensus 122 ~~~l~~l~~~a~~~gv~l~lE~~~ 145 (275)
T 3qc0_A 122 VEGIAAVLPHARAAGVPLAIEPLH 145 (275)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCC
T ss_pred HHHHHHHHHHHHHcCCEEEEeECC
Confidence 356788888888999999998754
No 286
>1v6t_A Hypothetical UPF0271 protein PH0986; TIM-barrel, lactam utilization protein, structural genomics; 1.70A {Pyrococcus horikoshii} SCOP: c.6.2.5
Probab=20.90 E-value=4.2e+02 Score=23.14 Aligned_cols=29 Identities=3% Similarity=0.004 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEecCChhh
Q 015110 208 TNASHIKEGLSVLARYKRPLLVHAEMEKG 236 (413)
Q Consensus 208 ~~~~~l~~~~~~A~~~g~~v~~H~e~~~~ 236 (413)
-++..+.+.++.|+++|+.+-.|..-++.
T Consensus 40 GDp~~M~~tv~lA~~~gV~IGAHPgypDl 68 (255)
T 1v6t_A 40 GDPLVMRKTVRLAKENDVQVGAHPGYPDL 68 (255)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECCCSCT
T ss_pred CCHHHHHHHHHHHHHcCCeEecCCCCCcc
Confidence 47889999999999999999999977665
No 287
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=20.50 E-value=4e+02 Score=22.71 Aligned_cols=113 Identities=10% Similarity=-0.031 Sum_probs=63.4
Q ss_pred hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEE-EecCChhhchhhHhhccCcCCccccccC
Q 015110 178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLL-VHAEMEKGSERHVKLEDDTLDTRSYSTY 256 (413)
Q Consensus 178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~-~H~e~~~~~~~~~~~~~~~~~~~~~~~~ 256 (413)
..+.++.+.+.|..++.+.. +. ..+ ++++.+.++++|+.+. +|+....... +.. .
T Consensus 25 ~~~~l~~~~~~G~~~vEl~~-~~------~~~---~~~~~~~l~~~gl~~~~~~~~~~~~~~----------~~~----~ 80 (269)
T 3ngf_A 25 FLERFRLAAEAGFGGVEFLF-PY------DFD---ADVIARELKQHNLTQVLFNMPPGDWAA----------GER----G 80 (269)
T ss_dssp HHHHHHHHHHTTCSEEECSC-CT------TSC---HHHHHHHHHHTTCEEEEEECCCSCTTT----------TCC----B
T ss_pred HHHHHHHHHHcCCCEEEecC-Cc------cCC---HHHHHHHHHHcCCcEEEEecCCCcccc----------CCC----C
Confidence 34567777889999988753 11 123 4566667788999876 5753211100 000 0
Q ss_pred CCCCch--HHHHHHHHHHHHHHhhcccCCCCCCceEEEEccCCh-----hhH----H----HHHHHHHHCCCCEEEEccc
Q 015110 257 LKTRPP--SWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-----SSS----L----DLLMEAKTNGDSITVETCP 321 (413)
Q Consensus 257 ~~~~p~--~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~-----~~~----~----~~i~~ak~~G~~v~~e~~p 321 (413)
...-|. ......+.+.+++|+.. |++..+.|.... ++. . ++.+.+++.|+.+..|...
T Consensus 81 ~~~~~~~r~~~~~~~~~~i~~A~~l-------Ga~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~n 153 (269)
T 3ngf_A 81 MAAISGREQEFRDNVDIALHYALAL-------DCRTLHAMSGITEGLDRKACEETFIENFRYAADKLAPHGITVLVEPLN 153 (269)
T ss_dssp CTTCTTCHHHHHHHHHHHHHHHHHT-------TCCEEECCBCBCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCC
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHc-------CCCEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCC
Confidence 001111 12235678888988875 777767665311 011 1 2344567889999988744
No 288
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=20.48 E-value=4.2e+02 Score=22.93 Aligned_cols=36 Identities=19% Similarity=0.111 Sum_probs=25.1
Q ss_pred CceEEEEccCChhhHHHHHHHHHHCCCCEEEEcccc
Q 015110 287 GAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPH 322 (413)
Q Consensus 287 g~~vhi~H~s~~~~~~~~i~~ak~~G~~v~~e~~p~ 322 (413)
|+.....|.-..+...+.++..|+.|..+-..+.|.
T Consensus 109 GAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~ 144 (246)
T 3inp_A 109 GATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPA 144 (246)
T ss_dssp TCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTT
T ss_pred CCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCC
Confidence 555666676432144578888888999888888775
No 289
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=20.30 E-value=4.9e+02 Score=23.96 Aligned_cols=122 Identities=12% Similarity=0.020 Sum_probs=66.0
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCCCCCC--HHHHHHHHHHHHhcCCCEEEecCChhhchhhHhhccCcCCccccccC
Q 015110 179 ASALEALLNAGVLGLKSFMCPSGINDFPMTN--ASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTY 256 (413)
Q Consensus 179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~--~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~~~~~~~~~~ 256 (413)
.+.++.+.+.|..++.++..... ...+... .+.+.++.+.++++|+.+..|.-..-. .+ .+..+
T Consensus 36 ~e~l~~aa~~G~d~VEl~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~------------~p-~~~~g 101 (394)
T 1xla_A 36 VEAVHKLAELGAYGITFHDNDLI-PFDATEAEREKILGDFNQALKDTGLKVPMVTTNLFS------------HP-VFKDG 101 (394)
T ss_dssp HHHHHHHHHHTCCEEEEEHHHHS-CTTCCHHHHHHHHHHHHHHHHHHCCBCCEEECCCSS------------SG-GGTTC
T ss_pred HHHHHHHHHcCCCEEEecCCccC-cccCCchhhHHHHHHHHHHHHHcCCeEEEEecCccC------------Cc-cccCC
Confidence 45567777789999877642100 0001111 457888888899999988665321100 00 00000
Q ss_pred CCCCch--H--HHHHHHHHHHHHHhhcccCCCCCCceEEEEccCC----------hhhH-------H-HHHHHHHHCC--
Q 015110 257 LKTRPP--S--WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD----------ASSS-------L-DLLMEAKTNG-- 312 (413)
Q Consensus 257 ~~~~p~--~--~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~----------~~~~-------~-~~i~~ak~~G-- 312 (413)
....|. . .....+.+.+++++.. |++..+.|... .++. + ++.+.+++.|
T Consensus 102 ~l~~~d~~~r~~~i~~~~~~i~~A~~L-------Ga~~vvv~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~ 174 (394)
T 1xla_A 102 GFTSNDRSIRRFALAKVLHNIDLAAEM-------GAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYN 174 (394)
T ss_dssp STTCSSHHHHHHHHHHHHHHHHHHHHT-------TCSEEEECCTTCEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHh-------CCCEEEECCCCCccccccccCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 001111 1 1235677888888875 77777776441 1011 1 3334466789
Q ss_pred CCEEEEccc
Q 015110 313 DSITVETCP 321 (413)
Q Consensus 313 ~~v~~e~~p 321 (413)
+.+..|..|
T Consensus 175 v~l~lE~~~ 183 (394)
T 1xla_A 175 LRIALEPKP 183 (394)
T ss_dssp CEEEECCCS
T ss_pred eEEEEecCC
Confidence 889888876
No 290
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=20.03 E-value=96 Score=31.34 Aligned_cols=109 Identities=20% Similarity=0.160 Sum_probs=59.7
Q ss_pred cchHHHHHHHHhCCceEEEe-CCCCC-------CCCCCcHHHHHHHHHHHhcCCeeeEEeeceecCCchhhHHHHHHHHH
Q 015110 116 EGFPSGTKAAAAGGITTLID-MPLNS-------DPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLN 187 (413)
Q Consensus 116 e~~~~~~~~al~~GvTTv~d-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 187 (413)
+.......-|.+.|+-.++. -.... .|... ..+++..+-+..+. +.+..|.....-..+..+.++.+.+
T Consensus 309 ~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~--~di~~l~~Ya~~kg-V~i~lw~~~~~~~~~~~~~~~~~~~ 385 (641)
T 3a24_A 309 PTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKE--IDLKELVDYAASKN-VGIILWAGYHAFERDMENVCRHYAE 385 (641)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTT--CCHHHHHHHHHHTT-CEEEEEEEHHHHHTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCc--CCHHHHHHHHHhcC-CEEEEEeeCcchHHHHHHHHHHHHH
Confidence 34445566788999888763 22110 01000 12333333333332 3333332211111122345666677
Q ss_pred cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015110 188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231 (413)
Q Consensus 188 ~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 231 (413)
-|+.++|+-+...+ .+...+....+++.|+++++.|..|-
T Consensus 386 ~Gv~gvK~Df~~~~----~Q~~v~~y~~i~~~aA~~~l~V~fHg 425 (641)
T 3a24_A 386 MGVKGFKVDFMDRD----DQEMTAFNYRAAEMCAKYKLILDLHG 425 (641)
T ss_dssp HTCCEEEEECCCCC----SHHHHHHHHHHHHHHHHTTCEEEECS
T ss_pred cCCCEEEECCCCCC----cHHHHHHHHHHHHHHHHcCCEEEcCC
Confidence 89999998543321 13345678889999999999999994
No 291
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=20.01 E-value=2.6e+02 Score=24.24 Aligned_cols=85 Identities=19% Similarity=0.228 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhcCCCEEE---ecCChhhchhhHhhccCcCCccccccCCCCCc--hH--HHHHHHHHHHHHHhhcccCC
Q 015110 211 SHIKEGLSVLARYKRPLLV---HAEMEKGSERHVKLEDDTLDTRSYSTYLKTRP--PS--WEEAAIRELLTVAKDTRTDG 283 (413)
Q Consensus 211 ~~l~~~~~~A~~~g~~v~~---H~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~--~E~~~v~~~~~~a~~~~~~~ 283 (413)
+.+++.++.|+++|.+... |...... +....+ .. .-...+.++.+.+++.
T Consensus 88 ~~~~~~i~~a~~lG~~~v~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~l~~l~~~a~~~---- 144 (294)
T 3vni_A 88 AFYTDLLKRLYKLDVHLIGGALYSYWPID-------------------YTKTIDKKGDWERSVESVREVAKVAEAC---- 144 (294)
T ss_dssp HHHHHHHHHHHHHTCCEEEESTTSCSSCC-------------------TTSCCCHHHHHHHHHHHHHHHHHHHHHT----
T ss_pred HHHHHHHHHHHHhCCCeeeccccCCCCCc-------------------CCCCCCHHHHHHHHHHHHHHHHHHHHHc----
Confidence 4678899999999988763 4311000 000000 00 1134567777777764
Q ss_pred CCCCceEEEEccC--------ChhhHHHHHHHHHHCCCCEEEEccc
Q 015110 284 PAEGAHLHIVHLS--------DASSSLDLLMEAKTNGDSITVETCP 321 (413)
Q Consensus 284 ~~~g~~vhi~H~s--------~~~~~~~~i~~ak~~G~~v~~e~~p 321 (413)
|+++-+.... +.++..++++.....++.+..|++-
T Consensus 145 ---Gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v~~~~vg~~~D~~h 187 (294)
T 3vni_A 145 ---GVDFCLEVLNRFENYLINTAQEGVDFVKQVDHNNVKVMLDTFH 187 (294)
T ss_dssp ---TCEEEEECCCTTTCSSCCSHHHHHHHHHHHCCTTEEEEEEHHH
T ss_pred ---CCEEEEEecCcccCcccCCHHHHHHHHHHcCCCCEEEEEEhhh
Confidence 8887777552 3335667777765555667766543
Done!