RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 015111
(413 letters)
>gnl|CDD|215298 PLN02542, PLN02542, fructose-1,6-bisphosphatase.
Length = 412
Score = 797 bits (2060), Expect = 0.0
Identities = 348/414 (84%), Positives = 368/414 (88%), Gaps = 6/414 (1%)
Query: 4 AAATASSQLLFSSSHSFSRLSPYQICVFDSKALVSSCPSNVLKRRHVGVAAGVRCMA--- 60
AA T SS LL SSS S + S Q+ FDS L S P + ++H AAGVRC A
Sbjct: 1 AATTTSSHLLLSSSRSVAPASQCQLSSFDSLTLNS-FPRSPGSKKH-HSAAGVRCAAAAA 58
Query: 61 -VGTTSEVATKKRSSYEIETLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAG 119
T+ A K+S YEI+TLT WLLKQEQ+GVIDAELTIVLSSIS ACKQIASLVQRAG
Sbjct: 59 AAAATASPAATKKSGYEIQTLTTWLLKQEQAGVIDAELTIVLSSISMACKQIASLVQRAG 118
Query: 120 ISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGN 179
ISNLTG+QGAVN+QGEDQKKLDV+SNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGN
Sbjct: 119 ISNLTGVQGAVNIQGEDQKKLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGN 178
Query: 180 YIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLADIGDDPTLGNTELRCVVNVCQPGSN 239
YIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLADIGDD TL + E RC+VNVCQPGSN
Sbjct: 179 YIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLADIGDDSTLDSVEQRCIVNVCQPGSN 238
Query: 240 LLAAGYCMYSSSVIFVITLGNGVFAFTLDPMYGEFVLTQENIQIPKTGKIYAFNEGNYQL 299
LLAAGYCMYSSSVIFV+T+G GVF+FTLDPMYGEFVLTQENIQIPK GKIY+FNEGNYQL
Sbjct: 239 LLAAGYCMYSSSVIFVLTIGTGVFSFTLDPMYGEFVLTQENIQIPKAGKIYSFNEGNYQL 298
Query: 300 WDDKLKKYIDDLKDPGPSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLL 359
WDDKLKKYIDDLKDPGPSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLL
Sbjct: 299 WDDKLKKYIDDLKDPGPSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLL 358
Query: 360 YECAPMSFIVEQAGGKGSDGHQRVLDIQPTEIHQRIPLYIGSQEEVEKLEKYLA 413
YECAPMSFIVEQAGGKGSDGHQR+LDIQPTEIHQR+PLYIGS EEVEKLEKYLA
Sbjct: 359 YECAPMSFIVEQAGGKGSDGHQRILDIQPTEIHQRVPLYIGSVEEVEKLEKYLA 412
>gnl|CDD|238214 cd00354, FBPase, Fructose-1,6-bisphosphatase, an enzyme that
catalyzes the hydrolysis of fructose-1,6-biphosphate
into fructose-6-phosphate and is critical in
gluconeogenesis pathway. The alignment model also
includes chloroplastic FBPases and
sedoheptulose-1,7-biphosphatases that play a role in
pentose phosphate pathway (Calvin cycle).
Length = 315
Score = 517 bits (1334), Expect = 0.0
Identities = 182/329 (55%), Positives = 235/329 (71%), Gaps = 14/329 (4%)
Query: 84 LLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKKLDVV 143
LL+Q + G +LT +LSS++ ACK+I+ V+RAG++ L G+ G+VNVQG++QKKLDV+
Sbjct: 1 LLEQLRKGAATGDLTDLLSSLALACKEISRAVRRAGLAGLLGLAGSVNVQGDEQKKLDVL 60
Query: 144 SNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIF 203
+N++F L+SSG ++ASEEE+ PV VEES G Y+V FDPLDGSSNIDA VS G+IF
Sbjct: 61 ANDIFIEALKSSGVVAVLASEEEEEPVPVEESKDGKYLVAFDPLDGSSNIDANVSVGTIF 120
Query: 204 GIYSPNDECLADIGDDPTLGNTELRCVVNVCQPGSNLLAAGYCMYSSSVIFVITLGNGVF 263
IY A D QPG N +AAGY +Y S + V+TLG GV
Sbjct: 121 SIYPGPSGADATEKD--------------FLQPGRNQVAAGYALYGPSTMLVLTLGQGVH 166
Query: 264 AFTLDPMYGEFVLTQENIQIPKTGKIYAFNEGNYQLWDDKLKKYIDDLKDPGPSGKPYSA 323
FTLDP GEF+LT N++IPK GKIY+ NEGNY+ WD+ +KKYIDD K GKPY+
Sbjct: 167 GFTLDPSLGEFILTHPNVKIPKKGKIYSINEGNYRYWDEPVKKYIDDCKAGEDGGKPYNL 226
Query: 324 RYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQRV 383
RYIGS+V D HR L+ GGI+ YP DKKS GKLRLLYE PM+F+VEQAGGK +DG +R+
Sbjct: 227 RYIGSMVADVHRILVRGGIFLYPADKKSPKGKLRLLYEANPMAFLVEQAGGKATDGKERI 286
Query: 384 LDIQPTEIHQRIPLYIGSQEEVEKLEKYL 412
LDI PT +HQR+P+ +GS+EEVE++E+YL
Sbjct: 287 LDIVPTSLHQRVPVILGSKEEVERVEEYL 315
>gnl|CDD|236458 PRK09293, PRK09293, fructose-1,6-bisphosphatase; Provisional.
Length = 327
Score = 435 bits (1122), Expect = e-153
Identities = 167/337 (49%), Positives = 221/337 (65%), Gaps = 18/337 (5%)
Query: 79 TLTNWLL-KQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQ 137
TL +L+ +Q + ELT ++S+I+ A K I+ + + G++++ G G NVQGE Q
Sbjct: 4 TLGEFLVEQQREFPHATGELTALISAIALAAKIISRAINKGGLADILGAAGTENVQGETQ 63
Query: 138 KKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAV 197
KKLDV +NE+ L++ G +ASEEED V + E+ G Y+V +DPLDGSSNID V
Sbjct: 64 KKLDVFANEILIEALKARGHVAGLASEEEDEIVPIPENE-GKYLVAYDPLDGSSNIDVNV 122
Query: 198 STGSIFGIYSPNDECLADIGDDPTLGNTELRCVVNVCQPGSNLLAAGYCMYSSSVIFVIT 257
S G+IF IY D QPG+N +AAGY +Y S + V+T
Sbjct: 123 SVGTIFSIY-RAPVGTPTEEDFL--------------QPGNNQVAAGYVLYGPSTMLVLT 167
Query: 258 LGNGVFAFTLDPMYGEFVLTQENIQIPKTGKIYAFNEGNYQLWDDKLKKYIDDLK-DPGP 316
G+GV FTLDP GEFVLT ENI+IP+ GK YA NEGN + W+ +KKYI+ L GP
Sbjct: 168 TGDGVHGFTLDPSLGEFVLTHENIRIPEDGKEYAINEGNQRHWEPGVKKYIELLAGKDGP 227
Query: 317 SGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKG 376
G+PY+ RYIGS+V D HR LL GGI+ YP D+ NGKLRLLYE PM+F+VEQAGG
Sbjct: 228 RGRPYNMRYIGSMVADVHRILLKGGIFLYPADEPYPNGKLRLLYEANPMAFLVEQAGGAA 287
Query: 377 SDGHQRVLDIQPTEIHQRIPLYIGSQEEVEKLEKYLA 413
SDG QR+LDI+P +HQR+PL++GS+EEVE++E+Y A
Sbjct: 288 SDGKQRILDIEPESLHQRVPLFLGSKEEVERVEEYHA 324
>gnl|CDD|223236 COG0158, Fbp, Fructose-1,6-bisphosphatase [Carbohydrate transport
and metabolism].
Length = 326
Score = 415 bits (1068), Expect = e-145
Identities = 173/339 (51%), Positives = 227/339 (66%), Gaps = 18/339 (5%)
Query: 77 IETLTNWLL-KQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGE 135
++TL +L+ KQ++ AEL+ VLSSI+ A K+IA + +AG++ + G GA NVQG+
Sbjct: 1 MKTLGRFLVEKQKEFKAATAELSAVLSSIALAGKEIAREINKAGLAGVLGYSGAENVQGD 60
Query: 136 DQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDA 195
QKKLDV +NE+ L++ G IASEEED PV E+ +G+Y V +DPLDGSSNID
Sbjct: 61 TQKKLDVFANEILIEALKARGNVAGIASEEEDEPVTFPEN-NGSYAVAYDPLDGSSNIDV 119
Query: 196 AVSTGSIFGIYSPNDECLADIGDDPTLGNTELRCVVNVCQPGSNLLAAGYCMYSSSVIFV 255
VS G+IF IY D QPG+ +AAGY +Y S + V
Sbjct: 120 NVSVGTIFSIY-RRPGSPGTEED--------------FLQPGNKQVAAGYVVYGPSTMLV 164
Query: 256 ITLGNGVFAFTLDPMYGEFVLTQENIQIPKTGKIYAFNEGNYQLWDDKLKKYIDDLKDPG 315
TLG GV FTLDP GEF+LT ENI+IP+ GKIYA NEGN + W++ +KKYI D
Sbjct: 165 YTLGEGVHGFTLDPSLGEFILTHENIRIPEKGKIYAINEGNQRHWEEGVKKYIKDCFAED 224
Query: 316 PS-GKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGG 374
+PY+ RYIGS+V D HR LL GGI+ YP DK++ NGKLRLLYE PM+F+VEQAGG
Sbjct: 225 KGTRRPYNMRYIGSMVADVHRILLKGGIFLYPSDKRAPNGKLRLLYEANPMAFLVEQAGG 284
Query: 375 KGSDGHQRVLDIQPTEIHQRIPLYIGSQEEVEKLEKYLA 413
K +DG QR+LDI P ++HQR+PL++GS+EEVEKLE+++
Sbjct: 285 KATDGKQRILDIVPEKLHQRVPLFLGSKEEVEKLERFIK 323
>gnl|CDD|215147 PLN02262, PLN02262, fructose-1,6-bisphosphatase.
Length = 340
Score = 413 bits (1062), Expect = e-144
Identities = 178/337 (52%), Positives = 227/337 (67%), Gaps = 17/337 (5%)
Query: 79 TLTNWLLKQEQSGVIDAE--LTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGED 136
T+T ++L EQS +A LTI+LS I CK + S V +AG++ L G+ G NVQGE+
Sbjct: 14 TITRFVL-NEQSKHPEARGDLTILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEE 72
Query: 137 QKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAA 196
QKKLDV+SN+VF L SSGRT ++ SEE++ + VE S G Y VVFDPLDGSSNID
Sbjct: 73 QKKLDVLSNDVFIKALVSSGRTNVLVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSNIDCG 132
Query: 197 VSTGSIFGIYSPNDECLADIGDDPTLGNTELRCVVNVCQPGSNLLAAGYCMYSSSVIFVI 256
VS G+IFGIY D G + T+ + V QPG ++AAGYCMY SS V+
Sbjct: 133 VSIGTIFGIYMLKD------GGEGTVED--------VLQPGKEMVAAGYCMYGSSCTLVL 178
Query: 257 TLGNGVFAFTLDPMYGEFVLTQENIQIPKTGKIYAFNEGNYQLWDDKLKKYIDDLKDPGP 316
+ G GV FTLDP GEF+LT +I+IPK GKIY+ NEGN + WD KY++ K P
Sbjct: 179 STGGGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAKYVEKCKFPKD 238
Query: 317 SGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKG 376
P S RYIGS+V D HRTLLYGGI+ YP DKKS NGKLR+LYE PMSF+VEQAGG+
Sbjct: 239 GSSPKSLRYIGSMVADVHRTLLYGGIFLYPADKKSPNGKLRVLYEVFPMSFLVEQAGGQA 298
Query: 377 SDGHQRVLDIQPTEIHQRIPLYIGSQEEVEKLEKYLA 413
G QR LD+ PT+IH+R P+++GS ++VE+++ A
Sbjct: 299 FTGKQRALDLVPTKIHERSPIFLGSYDDVEEIKALYA 335
>gnl|CDD|215854 pfam00316, FBPase, Fructose-1-6-bisphosphatase.
Length = 325
Score = 399 bits (1028), Expect = e-139
Identities = 166/335 (49%), Positives = 225/335 (67%), Gaps = 15/335 (4%)
Query: 79 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQK 138
TLT ++++++ ELT +LSS++ A K IA ++RAG++NL G G NVQG++QK
Sbjct: 2 TLTRFIIEEQLEEFATGELTDLLSSLALAAKFIARAIRRAGLANLLGGAGGTNVQGDEQK 61
Query: 139 KLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVS 198
KLDV+++++F L++SG ++ASEE+D V +E + G Y V FDPLDGSSNID VS
Sbjct: 62 KLDVLADDLFRAALKASGAVAVLASEEQDELVVLEGNEEGKYAVAFDPLDGSSNIDTNVS 121
Query: 199 TGSIFGIYSPNDECLADIGDDPTLGNTELRCVVNVCQPGSNLLAAGYCMYSSSVIFVITL 258
G+IF IY GD PT ++ QPG +AAGY +Y S + V+TL
Sbjct: 122 VGTIFSIYP------RVSGDSPT--------TIDFLQPGREQVAAGYVIYGPSTMLVLTL 167
Query: 259 GNGVFAFTLDPMYGEFVLTQENIQIPKTGKIYAFNEGNYQLWDDKLKKYIDDLKDPGP-S 317
G GV FTLDP GEF+L E ++IP+ GKI++ NEGNY+ WD ++KYIDD K
Sbjct: 168 GCGVHGFTLDPDLGEFILVDETVKIPEEGKIFSINEGNYRHWDPPVRKYIDDCKAGDDGP 227
Query: 318 GKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKGS 377
+PY+ RYIGS+V D HR LL GGI+ YP DK+ NGKLRLLYECAPM+F++EQAGG +
Sbjct: 228 RRPYNMRYIGSMVADVHRILLKGGIFLYPGDKRYPNGKLRLLYECAPMAFLIEQAGGGAT 287
Query: 378 DGHQRVLDIQPTEIHQRIPLYIGSQEEVEKLEKYL 412
DG +R+LDI PT +HQR P +GS +EV + E+Y
Sbjct: 288 DGRKRILDIVPTRLHQRTPFILGSIDEVARFEEYH 322
>gnl|CDD|215337 PLN02628, PLN02628, fructose-1,6-bisphosphatase family protein.
Length = 351
Score = 333 bits (856), Expect = e-112
Identities = 159/338 (47%), Positives = 217/338 (64%), Gaps = 23/338 (6%)
Query: 79 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLT----GIQGAVNVQG 134
TL +L E S V +L ++++ I ACK+IA+L+ S L G GA
Sbjct: 19 TLMEFL-GTEGSNV-GDDLVVLMAHIQAACKRIAALLASPFNSELGKTSSGASGASGSGR 76
Query: 135 EDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNID 194
+ K LD+VSNE+ + LR+SG+ ++ASEE+D P+ + + G Y+VVFDPLDGS NID
Sbjct: 77 DAPKPLDIVSNEIILSSLRNSGKVAVMASEEDDAPIWIGDD--GPYVVVFDPLDGSRNID 134
Query: 195 AAVSTGSIFGIYSPNDECLADIGDDPTLGNTELRCVVNVCQPGSNLLAAGYCMYSSSVIF 254
A++ TG+IFGIY+ L + P E + +NV Q GS L+AAGY +YSS+ I
Sbjct: 135 ASIPTGTIFGIYNR----LVEADHLPV----EEKAQLNVLQRGSRLVAAGYVLYSSATIL 186
Query: 255 VITLGNGVFAFTLDPMYGEFVLTQENIQIPKTGKIYAFNEGNYQLWDDKLKKYIDDLKD- 313
I+ G+G FTLD GEFVLT +I+IP+ G+IY+ N+ Y W + L+KYID ++
Sbjct: 187 CISFGSGTHGFTLDHSTGEFVLTHPDIKIPERGQIYSVNDARYFDWPEGLRKYIDTVRQG 246
Query: 314 PGPSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAG 373
G K YSARYI SLV D HRT+LYGGI PR LRL+YE P+SF+VEQAG
Sbjct: 247 KGQYPKKYSARYICSLVADLHRTILYGGIAMNPRS------HLRLVYEANPLSFLVEQAG 300
Query: 374 GKGSDGHQRVLDIQPTEIHQRIPLYIGSQEEVEKLEKY 411
G+GSDG +R+L IQP ++HQR+PL++GS E+V +LE Y
Sbjct: 301 GRGSDGKRRILSIQPVKLHQRLPLFLGSSEDVLELESY 338
>gnl|CDD|215256 PLN02462, PLN02462, sedoheptulose-1,7-bisphosphatase.
Length = 304
Score = 154 bits (391), Expect = 9e-44
Identities = 98/331 (29%), Positives = 149/331 (45%), Gaps = 52/331 (15%)
Query: 94 DAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLR 153
D +L ++ + AC+ IA V+ A VN G++Q +D++++++ L+
Sbjct: 12 DKKLRRLIMCMGEACRTIAFKVRTA----SCTGTACVNSFGDEQLAVDMLADKLLFEALK 67
Query: 154 SSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECL 213
S SEE + G + V FDPLDGSS +D + G+IFG++
Sbjct: 68 YSHVCKYACSEEVPEVQDMGGPVEGGFSVAFDPLDGSSIVDTNFAVGTIFGVWP------ 121
Query: 214 ADIGDDPTLGNTELRCVVNVCQPGSNLLAAGYCMYSSSVIFVITL--GNGVFAFTLDPMY 271
D G T G + +AA +Y +V+ L G G F L
Sbjct: 122 ----GDKLTGVT-----------GRDQVAAAMGIYGPRTTYVVALKDGPGTHEFLLLDD- 165
Query: 272 GEFVLTQENIQIPKTGKIYA-------FNEGNYQLWDDKLKKYIDDLKDPGPSGKPYSAR 324
G++ +E +I GKI++ F+ Y +KL Y K Y+ R
Sbjct: 166 GKWQHVKETTEI-GEGKIFSPGNLRATFDNPGY----EKLINYYVSEK--------YTLR 212
Query: 325 YIGSLVGD-FHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQR- 382
Y G +V D + + G++ KSK KLRLL+E AP+ +VE+AGGK SDG Q
Sbjct: 213 YTGGMVPDVYQIIVKEKGVFTNVTSPKSK-AKLRLLFEVAPLGLLVEKAGGKSSDGVQGG 271
Query: 383 -VLDIQPTEIHQRIPLYIGSQEEVEKLEKYL 412
VLD Q + QR + GS+ EV + E+ L
Sbjct: 272 SVLDKQINNLDQRTQVAYGSKNEVIRFEETL 302
>gnl|CDD|238814 cd01636, FIG, FIG, FBPase/IMPase/glpX-like domain. A superfamily of
metal-dependent phosphatases with various substrates.
Fructose-1,6-bisphospatase (both the major and the
glpX-encoded variant) hydrolyze
fructose-1,6,-bisphosphate to fructose-6-phosphate in
gluconeogenesis. Inositol-monophosphatases and inositol
polyphosphatases play vital roles in eukaryotic
signalling, as they participate in metabolizing the
messenger molecule Inositol-1,4,5-triphosphate. Many of
these enzymes are inhibited by Li+.
Length = 184
Score = 58.2 bits (141), Expect = 5e-10
Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 2/108 (1%)
Query: 101 LSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGI 160
L + K+ + +A L+G + DV + + N L+SS
Sbjct: 1 LEELCRVAKEAGLAILKAFGRELSGKVKITKSDNDPVTTADVAAETLIRNMLKSSFPDVK 60
Query: 161 IASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAA-VSTGSIFGIYS 207
I EE Y V DP+DG+ N + +Y
Sbjct: 61 IVG-EESGVAEEVMGRRDEYTWVIDPIDGTKNFINGLPFVAVVIAVYV 107
Score = 38.9 bits (91), Expect = 0.001
Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 8/58 (13%)
Query: 318 GKPYSARYIGSLVGDFHRTLL-YGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGG 374
Y R +GS V L IY P K R ++ A + IV +AGG
Sbjct: 129 LAVYRIRIVGSAVAKMCLVALGLADIYYEPGGK-------RRAWDVAASAAIVREAGG 179
>gnl|CDD|238820 cd01642, Arch_FBPase_2, Putative fructose-1,6-bisphosphatase or
related enzymes of inositol monophosphatase family.
These are Mg++ dependent phosphatases. Members in this
family may have fructose-1,6-bisphosphatase and/or
inositol-monophosphatase activity.
Fructose-1,6-bisphosphatase catalyzes the hydrolysis of
fructose-1,6-biphosphate into fructose-6-phosphate and
is critical in gluconeogenesis pathway.
Length = 244
Score = 42.4 bits (100), Expect = 2e-04
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 107 ACKQIASLVQ---RAGISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIAS 163
K+I L+ R G+ + I+GA + D+ + E+ LR G G I S
Sbjct: 8 ITKEIILLLNEKNRQGL--VKLIRGAGGDVT---RVADLKAEEIILKLLREEGVFGQIIS 62
Query: 164 EEEDVPVAVEESYSGNYIVVFDPLDGSSN 192
EE SG YI V DPLDGS+N
Sbjct: 63 EES----GEIRKGSGEYIAVLDPLDGSTN 87
>gnl|CDD|183673 PRK12676, PRK12676, bifunctional inositol-1
monophosphatase/fructose-1,6-bisphosphatase; Reviewed.
Length = 263
Score = 41.8 bits (99), Expect = 3e-04
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 107 ACKQIASLVQRAGISNLTGIQGA-----VNVQGEDQKKLDVVSNEVFSNCLRSSGRTGII 161
C +A V++A I L G A + G K +D V+ ++ L+ GR I
Sbjct: 9 ICDDMAKEVEKA-IMPLFGTPDAGETVGMGADGTPTKLIDKVAEDIILEVLKPLGRCVNI 67
Query: 162 ASEEEDVPVAVEESYSGNYIVVFDPLDGSSN 192
SEE V Y VV DPLDG+ N
Sbjct: 68 ISEELGEIVGNGPEY----TVVLDPLDGTYN 94
>gnl|CDD|238773 cd01515, Arch_FBPase_1, Archaeal fructose-1,6-bisphosphatase and
related enzymes of inositol monophosphatase family
(FBPase class IV). These are Mg++ dependent
phosphatases. Members in this family may have both
fructose-1,6-bisphosphatase and inositol-monophosphatase
activity. In hyperthermophilic archaea, inositol
monophosphatase is thought to play a role in the
biosynthesis of di-myo-inositol-1,1'-phosphate, an
osmolyte unique to hyperthermophiles.
Length = 257
Score = 41.2 bits (97), Expect = 5e-04
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 108 CKQIASLVQRAGISNLTGIQGAVNV-----QGEDQKKLDVVSNEVFSNCLRSSGRTGIIA 162
+ IA +++A I L G + A V G K +D V+ + L+ G + I
Sbjct: 5 ARNIAKEIEKA-IKPLFGTEDASEVVKIGADGTPTKLIDKVAEDAAIEILKKLG-SVNIV 62
Query: 163 SEEEDVPVAVEESYSGNYIVVFDPLDGSSN 192
SEE + V Y VV DPLDG+ N
Sbjct: 63 SEE--IGVIDNGDEPE-YTVVLDPLDGTYN 89
>gnl|CDD|238815 cd01637, IMPase_like, Inositol-monophosphatase-like domains. This
family of phosphatases is dependent on bivalent metal
ions such as Mg++, and many members are inhibited by Li+
(which is thought to displace a bivalent ion in the
active site). Substrates include
fructose-1,6-bisphosphate, inositol poly- and
monophosphates, PAP and PAPS,
sedoheptulose-1,7-bisphosphate and probably others.
Length = 238
Score = 35.4 bits (82), Expect = 0.031
Identities = 26/155 (16%), Positives = 45/155 (29%), Gaps = 30/155 (19%)
Query: 237 GSNLLAAGYCMYSSSV-IFVITLGNGVFAFTLDPMYGEF---------VLTQENIQIPKT 286
G+ AG ++ S+ ++ G V DPM E L + + + K
Sbjct: 84 GTTNFVAGLPNFAVSIALYED--GKPVLGVIYDPMLDELYYAGRGKGAFLNGKKLPLSKD 141
Query: 287 GKIYAFNEGN--YQLWDDKLKKYIDDLKDPGPSGKPYSARYIGSLVGDFHRTLLY-GGIY 343
+ L ++ + + R GS D Y
Sbjct: 142 TPLNDALLSTNASMLRSNRAAVLASLVN------RALGIRIYGSAGLDLAYVAAGRLDAY 195
Query: 344 GYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKGSD 378
++ A + IVE+AGG +D
Sbjct: 196 LSSGLN---------PWDYAAGALIVEEAGGIVTD 221
>gnl|CDD|237601 PRK14076, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional.
Length = 569
Score = 34.7 bits (80), Expect = 0.084
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 134 GEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSN 192
G K++D+++ + N L GI+ SEE + YI V DP+DG+ N
Sbjct: 39 GTPTKRIDLIAENIAINSLEKFCS-GILISEEIGFKKIGKNK--PEYIFVLDPIDGTYN 94
>gnl|CDD|233046 TIGR00603, rad25, DNA repair helicase rad25. All proteins in this
family for which functions are known are DNA-DNA
helicases used for the initiation of nucleotide excision
repair and transacription as part of the TFIIH
complex.This family is based on the phylogenomic
analysis of JA Eisen (1999, Ph.D. Thesis, Stanford
University) [DNA metabolism, DNA replication,
recombination, and repair].
Length = 732
Score = 34.0 bits (78), Expect = 0.15
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 20 FSRLSPYQICVFDSKALVSSCPSNVLKRRHVGVAAGVRCMAVGTTSEVATKKRSSYEIET 79
+S + QIC F S A K R G A + V T S VA + SYE E
Sbjct: 321 WSTIDDSQICRFTSDA----------KERFHGEAG----VVVSTYSMVAHTGKRSYESEK 366
Query: 80 LTNWLLKQEQSGVIDAELTI--------VLSSISTACK 109
+ WL +E ++ E+ + VL+ + CK
Sbjct: 367 VMEWLTNREWGLILLDEVHVVPAAMFRRVLTIVQAHCK 404
>gnl|CDD|183738 PRK12775, PRK12775, putative trifunctional 2-polyprenylphenol
hydroxylase/glutamate synthase subunit beta/ferritin
domain-containing protein; Provisional.
Length = 1006
Score = 31.4 bits (71), Expect = 1.0
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 285 KTGKIYAFNEGNYQLWDDKLKKYIDDL---KDPGPSGKP 320
+T I F + W+DK KY DDL D G GKP
Sbjct: 127 RTTGIIGFRNKDLVFWEDKFGKYCDDLIVCTDDGSYGKP 165
>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase
(MDR)/zinc-dependent alcohol dehydrogenase-like family.
This group is a member of the medium chain
dehydrogenases/reductase (MDR)/zinc-dependent alcohol
dehydrogenase-like family, but lacks the zinc-binding
sites of the zinc-dependent alcohol dehydrogenases. The
medium chain dehydrogenases/reductase
(MDR)/zinc-dependent alcohol dehydrogenase-like family,
which contains the zinc-dependent alcohol dehydrogenase
(ADH-Zn) and related proteins, is a diverse group of
proteins related to the first identified member, class I
mammalian ADH. MDRs display a broad range of activities
and are distinguished from the smaller short chain
dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
acids of the MDR). The MDR proteins have 2 domains: a
C-terminal NAD(P)-binding Rossmann fold domain of a
beta-alpha form and an N-terminal catalytic domain with
distant homology to GroES. The MDR group contains a
host of activities, including the founding alcohol
dehydrogenase (ADH), quinone reductase, sorbitol
dehydrogenase, formaldehyde dehydrogenase, butanediol
DH, ketose reductase, cinnamyl reductase, and numerous
others. The zinc-dependent alcohol dehydrogenases (ADHs)
catalyze the NAD(P)(H)-dependent interconversion of
alcohols to aldehydes or ketones. Active site zinc has
a catalytic role, while structural zinc aids in
stability. ADH-like proteins typically form dimers
(typically higher plants, mammals) or tetramers (yeast,
bacteria), and generally have 2 tightly bound zinc atoms
per subunit. The active site zinc is coordinated by a
histidine, two cysteines, and a water molecule. The
second zinc seems to play a structural role, affects
subunit interactions, and is typically coordinated by 4
cysteines.
Length = 328
Score = 30.3 bits (69), Expect = 1.8
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 152 LRSSGRTGIIASEEEDVPVAVEESYSGNYI--VVFDPLDGS--SNIDAAVSTGSIFGIY 206
L + G +I ++EED+ V +G VVFDP+ G + + A++ G +Y
Sbjct: 185 LLALGAAHVIVTDEEDLVAEVLR-ITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVY 242
>gnl|CDD|220029 pfam08812, YtxC, YtxC-like family. This family includes proteins
similar to B. subtilis YtxC an uncharacterized protein.
Length = 220
Score = 29.8 bits (68), Expect = 2.3
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 13/56 (23%)
Query: 271 YGEFVLT---QENIQIPKTGKIYAF--NEGNYQLWDDK--------LKKYIDDLKD 313
Y EF+ IQ PK +++ +G++ L+D++ L++ ID+ +
Sbjct: 117 YQEFIKLLRYFVEIQEPKLEEVHIVIDPDGSFILYDEEGRDISNEELEELIDEEFE 172
>gnl|CDD|219371 pfam07313, DUF1460, Protein of unknown function (DUF1460). This
family consists of several hypothetical bacterial
proteins of around 260 residues in length. The function
of this family is unknown.
Length = 211
Score = 29.2 bits (66), Expect = 3.0
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 13/56 (23%)
Query: 161 IASEEEDVP--VAVEESYSGNYIVVFDPLDGSSNIDAAVS----TGSIFGIYSPND 210
A E +P VE YI P S +D AV TG GIY+P
Sbjct: 114 KADGGEYLPGLPVVERDIVVTYI----P---SDALDQAVLSRLRTGDYIGIYTPLT 162
>gnl|CDD|221397 pfam12054, DUF3535, Domain of unknown function (DUF3535). This
presumed domain is functionally uncharacterized. This
domain is found in eukaryotes. This domain is typically
between 439 to 459 amino acids in length. This domain is
found associated with pfam00271, pfam02985, pfam00176.
This domain has two completely conserved residues (P and
K) that may be functionally important.
Length = 442
Score = 29.2 bits (66), Expect = 4.0
Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 9/69 (13%)
Query: 95 AELTIVLSSISTACKQ-IASLVQRAGISNLTGIQGAVNVQGEDQKKLDV--------VSN 145
EL L + T C+Q + + V +S AV VQGE + + V
Sbjct: 186 DELVPSLKRLRTQCQQLLNTFVDVGKLSQSKLPSLAVVVQGEPEAGPEAFSIETAEKVVT 245
Query: 146 EVFSNCLRS 154
F +S
Sbjct: 246 TDFDKLKKS 254
>gnl|CDD|215930 pfam00459, Inositol_P, Inositol monophosphatase family.
Length = 269
Score = 28.1 bits (63), Expect = 7.4
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 161 IASEEEDVPVAVEESYSGNYIVVFDPLDGSSN 192
I EE E + G ++ DP+DG+ N
Sbjct: 65 IIGEETGAIGGTELTDDGPTWII-DPIDGTKN 95
>gnl|CDD|223559 COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related
enzymes of inositol monophosphatase family [Carbohydrate
transport and metabolism].
Length = 260
Score = 28.1 bits (63), Expect = 7.5
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 141 DVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSN 192
D + + LR++ I EE + + Y + V DP+DG++N
Sbjct: 45 DKAAERIIRARLRAAFPDHGILGEESGGALGGGDEY----VWVIDPIDGTTN 92
>gnl|CDD|235895 PRK06945, flgK, flagellar hook-associated protein FlgK; Validated.
Length = 651
Score = 28.4 bits (64), Expect = 8.5
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 85 LKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQG 128
L Q + V + +LT ++ I++ KQIA L + I+ QG
Sbjct: 151 LDQLRQSV-NTQLTSSVTQINSYTKQIAQLNDQ--IAKAESSQG 191
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.316 0.134 0.386
Gapped
Lambda K H
0.267 0.0724 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 20,812,067
Number of extensions: 2023003
Number of successful extensions: 1616
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1593
Number of HSP's successfully gapped: 29
Length of query: 413
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 314
Effective length of database: 6,546,556
Effective search space: 2055618584
Effective search space used: 2055618584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (26.9 bits)