RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 015111
(413 letters)
>d1d9qa_ e.7.1.1 (A:) Fructose-1,6-bisphosphatase {Garden pea (Pisum
sativum) [TaxId: 3888]}
Length = 340
Score = 454 bits (1170), Expect = e-161
Identities = 303/338 (89%), Positives = 321/338 (94%), Gaps = 3/338 (0%)
Query: 79 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQK 138
TLT+WLL+QEQ G+IDAELTIVLSSIS ACKQIASLVQRA ISNLTG QGAVN+QGEDQK
Sbjct: 3 TLTSWLLQQEQKGIIDAELTIVLSSISMACKQIASLVQRANISNLTGTQGAVNIQGEDQK 62
Query: 139 KLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVS 198
KLDV+SNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSN+DAAVS
Sbjct: 63 KLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNLDAAVS 122
Query: 199 TGSIFGIYSPNDECLADIGDDP---TLGNTELRCVVNVCQPGSNLLAAGYCMYSSSVIFV 255
TGSIFGIYSPNDECL D GDD TLG E RC+VNVCQPGSNLLAAGYCMYSSSVIFV
Sbjct: 123 TGSIFGIYSPNDECLPDFGDDSDDNTLGTEEQRCIVNVCQPGSNLLAAGYCMYSSSVIFV 182
Query: 256 ITLGNGVFAFTLDPMYGEFVLTQENIQIPKTGKIYAFNEGNYQLWDDKLKKYIDDLKDPG 315
+T+G GVF FTLDP+YGEFVLTQEN+QIPK+GKIY+FNEGNY+LWD+ LKKYIDDLK+PG
Sbjct: 183 LTIGKGVFVFTLDPLYGEFVLTQENLQIPKSGKIYSFNEGNYKLWDENLKKYIDDLKEPG 242
Query: 316 PSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGK 375
PSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGK
Sbjct: 243 PSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGK 302
Query: 376 GSDGHQRVLDIQPTEIHQRIPLYIGSQEEVEKLEKYLA 413
GSDGHQRVLDIQPTEIHQR+PLYIGS EEVEK+EKYLA
Sbjct: 303 GSDGHQRVLDIQPTEIHQRVPLYIGSTEEVEKVEKYLA 340
>d1nuwa_ e.7.1.1 (A:) Fructose-1,6-bisphosphatase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 328
Score = 406 bits (1045), Expect = e-142
Identities = 154/336 (45%), Positives = 216/336 (64%), Gaps = 14/336 (4%)
Query: 76 EIETLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGE 135
I TLT +++++ + E+T +L+S+ TA K I++ V++AGI++L GI G+ NV G+
Sbjct: 2 NIVTLTRFVMEEGRKARGTGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGIAGSTNVTGD 61
Query: 136 DQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDA 195
KKLDV+SN++ N L+SS T ++ SEE+ + VE G Y+V FDPLDGSSNID
Sbjct: 62 QVKKLDVLSNDLVINVLKSSFATCVLVSEEDKNAIIVEPEKRGKYVVCFDPLDGSSNIDC 121
Query: 196 AVSTGSIFGIYSPNDECLADIGDDPTLGNTELRCVVNVCQPGSNLLAAGYCMYSSSVIFV 255
VS G+IFGIY N D QPG NL+AAGY +Y S+ + V
Sbjct: 122 LVSIGTIFGIYRKNSTDEPSEKD--------------ALQPGRNLVAAGYALYGSATMLV 167
Query: 256 ITLGNGVFAFTLDPMYGEFVLTQENIQIPKTGKIYAFNEGNYQLWDDKLKKYIDDLKDPG 315
+ + NGV F LDP GEF+L +++I K G IY+ NEG + +D + +YI K P
Sbjct: 168 LAMVNGVNCFMLDPAIGEFILVDRDVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFPP 227
Query: 316 PSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGK 375
+ PY ARY+GS+V D HRTL+YGGI+ YP +KKS GKLRLLYEC PM++++E+AGG
Sbjct: 228 DNSAPYGARYVGSMVADVHRTLVYGGIFMYPANKKSPKGKLRLLYECNPMAYVMEKAGGL 287
Query: 376 GSDGHQRVLDIQPTEIHQRIPLYIGSQEEVEKLEKY 411
+ G + VLDI PT+IHQR P+ +GS E+V +L +
Sbjct: 288 ATTGKEAVLDIVPTDIHQRAPIILGSPEDVTELLEI 323
>d1r9da_ c.7.1.1 (A:) Glycerol dehydratase DhaB1 {Clostridium
butyricum [TaxId: 1492]}
Length = 786
Score = 31.0 bits (70), Expect = 0.30
Identities = 14/89 (15%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
Query: 274 FVLTQENIQIPKTGKIYAFNEGN--YQLWDDKLKKYIDDLKDPGP-SGKPYSARYIGSLV 330
F +++E+ + K ++ + G +L + + + + + Y +G +
Sbjct: 108 FQISEESKEKLK--DVFEYWNGKTTSELATSYMTEETREAVNCDVFTVGNYYYNGVGHVS 165
Query: 331 GDFHRTLLYGGIYGYPRDKKSKNGKLRLL 359
D+ + L G G + K + K R +
Sbjct: 166 VDYGKVLRV-GFNGIINEAKEQLEKNRSI 193
>d1ka1a_ e.7.1.1 (A:) 3';5'-adenosine bisphosphatase, PAP
phosphatase {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 354
Score = 28.9 bits (63), Expect = 1.0
Identities = 30/208 (14%), Positives = 54/208 (25%), Gaps = 25/208 (12%)
Query: 171 AVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLADIGDDPTLGNTELRCV 230
E G + + DP+DG+ + L P L +
Sbjct: 128 NYEGGRKGRFWCL-DPIDGTKGFLRGEQFAVCLALIVDGVVQLG-CIGCPNLVLSSY--- 182
Query: 231 VNVCQPGSNLLAAGYCMYSSSVIFVITLGNGVFAFTLDPMYGEFVLTQENIQIPKTGKIY 290
G+ L IF G G F + +++ K
Sbjct: 183 ------GAQDLKGHESFG---YIFRAVRGLGAFYSPSSDAESWTKIHVRHLKDTKDMITL 233
Query: 291 AFNEGNYQLWDDKLKKYIDDLKDPGPSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKK 350
E + D++ + L G Y R
Sbjct: 234 EGVEKGHSSHDEQTAIKNKLNISKSLHLDSQ----------AKYCLLALGLADVYLRLPI 283
Query: 351 SKNGKLRLLYECAPMSFIVEQAGGKGSD 378
+ + ++ ++ A + IV +AGG +D
Sbjct: 284 KLSYQEKI-WDHAAGNVIVHEAGGIHTD 310
>d1lbva_ e.7.1.1 (A:) Archaeal inositol
monophosphatase/fructose-1,6-bisphosphatase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 252
Score = 28.9 bits (63), Expect = 1.0
Identities = 13/54 (24%), Positives = 29/54 (53%)
Query: 359 LYECAPMSFIVEQAGGKGSDGHQRVLDIQPTEIHQRIPLYIGSQEEVEKLEKYL 412
+Y+ A FI E+AGGK ++ L + ++ +R+ + +++ KL + +
Sbjct: 198 IYDAAAGVFIAEKAGGKVTELDGESLGNKKFDMQERLNIVAANEKLHPKLLELI 251
>d1zata2 d.335.1.1 (A:217-338) L,D-transpeptidase, pre-catalytic
domain {Enterococcus faecium [TaxId: 1352]}
Length = 122
Score = 27.0 bits (60), Expect = 2.1
Identities = 12/66 (18%), Positives = 22/66 (33%), Gaps = 16/66 (24%)
Query: 292 FNEGNYQLWDDKLKKYIDDLKDP-GPSGKPYSARYIGSLVGDFHRTL-----LYGGIYGY 345
+N+G L +++++Y+ DL S F T + G Y +
Sbjct: 37 YNDGKVDLDTEQVRQYVTDLGTKYNTSTNDT----------KFKSTKRGEVTVPVGTYSW 86
Query: 346 PRDKKS 351
S
Sbjct: 87 TIQTDS 92
>d1twfi2 g.41.3.1 (I:50-121) RBP9 subunit of RNA polymerase II
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 72
Score = 25.6 bits (56), Expect = 2.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 213 LADIGDDPTLGNTELRC 229
+ DIG DPTL ++ C
Sbjct: 10 VQDIGSDPTLPRSDREC 26
>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha
subunit {Cow (Bos taurus) [TaxId: 9913]}
Length = 107
Score = 25.8 bits (56), Expect = 4.6
Identities = 8/52 (15%), Positives = 13/52 (25%)
Query: 260 NGVFAFTLDPMYGEFVLTQENIQIPKTGKIYAFNEGNYQLWDDKLKKYIDDL 311
+G F G + + K I G L + +L
Sbjct: 30 DGTFLVRESSKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKEL 81
>d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal
domain {Micromonospora viridifaciens [TaxId: 1881]}
Length = 356
Score = 27.0 bits (58), Expect = 4.6
Identities = 7/29 (24%), Positives = 9/29 (31%)
Query: 334 HRTLLYGGIYGYPRDKKSKNGKLRLLYEC 362
+ G Y +G LLYE
Sbjct: 313 VSKVFQPGSMSYSTLTALPDGTYGLLYEP 341
>d1hxna_ b.66.1.1 (A:) Hemopexin {Rabbit (Oryctolagus cuniculus)
[TaxId: 9986]}
Length = 210
Score = 26.2 bits (57), Expect = 6.3
Identities = 9/60 (15%), Positives = 18/60 (30%)
Query: 284 PKTGKIYAFNEGNYQLWDDKLKKYIDDLKDPGPSGKPYSARYIGSLVGDFHRTLLYGGIY 343
P + +++ D K + P P K A + +G + +Y
Sbjct: 115 PGSSRLHIMAGRRLWWLDLKSGAQATWTELPWPHEKVDGALCMEKPLGPNSCSTSGPNLY 174
>d1r89a1 a.160.1.3 (A:143-257) tRNA nucleotidyltransferase, second
domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 115
Score = 25.1 bits (55), Expect = 8.7
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 181 IVVFDPLDGSSNIDAAVSTGSI 202
V DP+D N+ A +S ++
Sbjct: 72 FFVVDPVDEKRNVAANLSLDNL 93
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.134 0.386
Gapped
Lambda K H
0.267 0.0671 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,495,319
Number of extensions: 70830
Number of successful extensions: 160
Number of sequences better than 10.0: 1
Number of HSP's gapped: 157
Number of HSP's successfully gapped: 11
Length of query: 413
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 325
Effective length of database: 1,199,356
Effective search space: 389790700
Effective search space used: 389790700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (24.7 bits)