Your job contains 1 sequence.
>015113
MDKPIYIHRFRYHFSPAKLSFWAFLSLSLFYFFFFHHSTSSPSDSSPRVLWGGAGWEYRV
LRSSRPRSRAGGHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASL
LERAGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVN
LLEACKTANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNH
IYGLSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIV
KGCLAALDTAKKSTGSGGKKKGAAQLRVFNLGNKSPEPVGKLVSILEKLLKVKAKKIVLP
MPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDYYSDSGKKSAV
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015113
(413 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2025472 - symbol:GAE2 "UDP-D-glucuronate 4-epi... 1387 7.8e-142 1
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 1361 2.1e-141 2
TAIR|locus:2126846 - symbol:GAE3 "UDP-D-glucuronate 4-epi... 1380 4.3e-141 1
TAIR|locus:2139134 - symbol:GAE5 "UDP-D-glucuronate 4-epi... 1322 6.0e-135 1
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 1267 4.0e-129 1
TAIR|locus:2076066 - symbol:GAE6 "UDP-D-glucuronate 4-epi... 1228 5.5e-125 1
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 730 3.2e-72 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 725 1.1e-71 1
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 706 1.1e-69 1
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 706 1.1e-69 1
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 664 3.2e-65 1
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 664 3.2e-65 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 613 8.1e-60 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 282 2.0e-30 2
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 282 2.0e-30 2
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 252 2.5e-28 2
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 252 2.5e-28 2
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 256 1.9e-26 2
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 282 9.7e-25 1
WB|WBGene00008132 - symbol:gale-1 species:6239 "Caenorhab... 277 3.3e-24 1
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 235 9.8e-23 2
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 256 5.5e-22 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 251 1.9e-21 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 230 1.9e-21 2
UNIPROTKB|F1NWE5 - symbol:GALE "Uncharacterized protein" ... 251 7.3e-21 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 230 3.6e-20 2
TAIR|locus:2138121 - symbol:UGE2 "UDP-D-glucose/UDP-D-gal... 243 1.9e-19 1
ZFIN|ZDB-GENE-060421-6479 - symbol:gale "UDP-galactose-4-... 243 1.9e-19 1
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 237 2.7e-19 1
UNIPROTKB|Q6A1A4 - symbol:galE "UDP-galactose 4-epimerase... 239 4.4e-19 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 221 1.2e-18 2
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 236 1.3e-18 1
UNIPROTKB|Q4QRB0 - symbol:Gale "Gale protein" species:101... 237 1.4e-18 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 233 1.7e-18 2
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 230 3.5e-18 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 220 4.2e-18 2
TAIR|locus:2010371 - symbol:UGE1 "UDP-D-glucose/UDP-D-gal... 234 4.2e-18 1
UNIPROTKB|F1PI88 - symbol:GALE "Uncharacterized protein" ... 232 7.4e-18 1
UNIPROTKB|Q14376 - symbol:GALE "UDP-glucose 4-epimerase" ... 232 7.4e-18 1
MGI|MGI:1921496 - symbol:Gale "galactose-4-epimerase, UDP... 231 9.7e-18 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 222 1.2e-17 2
UNIPROTKB|I3LL84 - symbol:GALE "Uncharacterized protein" ... 230 1.4e-17 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 224 1.6e-17 2
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 212 2.0e-17 2
TAIR|locus:2015253 - symbol:UGE3 "UDP-D-glucose/UDP-D-gal... 229 2.1e-17 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 213 2.3e-17 2
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 209 2.3e-17 2
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 212 2.4e-17 2
TAIR|locus:2123466 - symbol:UGE5 "UDP-D-glucose/UDP-D-gal... 227 3.9e-17 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 188 4.2e-17 2
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 204 4.6e-17 2
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 205 6.6e-17 2
UNIPROTKB|Q3T105 - symbol:GALE "Uncharacterized protein" ... 225 6.7e-17 1
CGD|CAL0000448 - symbol:GAL10 species:5476 "Candida albic... 232 8.1e-17 1
UNIPROTKB|Q59VY6 - symbol:GAL10 "Putative uncharacterized... 232 8.1e-17 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 207 9.4e-17 2
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 221 1.4e-16 1
RGD|621493 - symbol:Gale "UDP-galactose-4-epimerase" spec... 222 1.6e-16 1
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 204 1.6e-16 2
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 205 2.5e-16 2
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 218 4.1e-16 1
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 191 4.1e-16 2
TAIR|locus:2014235 - symbol:RHD1 "ROOT HAIR DEFECTIVE 1" ... 218 5.3e-16 1
UNIPROTKB|Q9KLH0 - symbol:VC_A0774 "UDP-glucose 4-epimera... 217 5.7e-16 1
TIGR_CMR|VC_A0774 - symbol:VC_A0774 "UDP-glucose 4-epimer... 217 5.7e-16 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 203 6.3e-16 2
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 181 6.8e-16 2
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 206 1.0e-15 2
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 214 1.0e-15 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 175 4.1e-15 2
TIGR_CMR|SO_1664 - symbol:SO_1664 "UDP-glucose 4-epimeras... 207 1.0e-14 1
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 127 1.4e-14 3
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 125 1.5e-14 3
POMBASE|SPBPB2B2.12c - symbol:gal10 species:4896 "Schizos... 213 1.6e-14 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 212 1.9e-14 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 178 2.6e-14 2
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 203 2.9e-14 1
TIGR_CMR|CJE_1287 - symbol:CJE_1287 "ADP-L-glycero-D-mann... 202 3.0e-14 1
FB|FBgn0035147 - symbol:Gale "UDP-galactose 4'-epimerase"... 203 3.9e-14 1
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 205 6.0e-14 1
UNIPROTKB|Q5QPP1 - symbol:GALE "UDP-glucose 4-epimerase" ... 184 7.3e-14 1
UNIPROTKB|Q5QPP2 - symbol:GALE "UDP-glucose 4-epimerase" ... 184 7.3e-14 1
UNIPROTKB|Q6T1X6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 198 7.8e-14 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 197 1.1e-13 1
UNIPROTKB|G4MX57 - symbol:MGG_08012 "UDP-glucose 4-epimer... 153 1.9e-13 2
POMBASE|SPBC365.14c - symbol:uge1 "UDP-glucose 4-epimeras... 197 2.2e-13 1
TAIR|locus:2163401 - symbol:DUR "DEFECTIVE UGE IN ROOT" s... 199 2.5e-13 1
SGD|S000000223 - symbol:GAL10 "UDP-glucose-4-epimerase" s... 202 3.0e-13 1
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 198 3.0e-13 1
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 124 3.2e-13 3
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 164 5.1e-13 2
TAIR|locus:2081675 - symbol:AUD1 "AT3G62830" species:3702... 192 5.5e-13 2
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 193 7.3e-13 1
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 193 1.1e-12 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 193 1.1e-12 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 193 1.1e-12 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 193 1.1e-12 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 193 1.1e-12 1
DICTYBASE|DDB_G0275295 - symbol:galE "UDP-glucose 4-epime... 190 1.3e-12 1
TIGR_CMR|SO_3188 - symbol:SO_3188 "dTDP-glucose 4,6-dehyd... 124 1.6e-12 3
WARNING: Descriptions of 112 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 1387 (493.3 bits), Expect = 7.8e-142, P = 7.8e-142
Identities = 276/416 (66%), Positives = 305/416 (73%)
Query: 1 MDK-PIYIHRFRYHFSPAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVL---WGGAGW 56
MDK P ++HR R+ S AK + WGG W
Sbjct: 17 MDKSPFFLHRTRWQSSVAKLAFWSLVFFGLLFIFFYRSPISNPDSSRRSLRTYSWGGPAW 76
Query: 57 EYRVLRSSRPRSRAGGHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRG 116
E RV S+R R+R G VLVTGAAGFVGTHVSAAL+RRGDGV+GLDNFNDYYDTSLKR
Sbjct: 77 EKRVRSSARVRTR-NGVSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRS 135
Query: 117 RASLLERAGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIA 176
R +LLER+GVF+VEGDIND LL+KLF +V F+HVMHLAAQAGVRYAM+NP SYV+SNIA
Sbjct: 136 RQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIA 195
Query: 177 GFVNLLEACKTANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAH 236
GFVNLLE CK+ANPQPAI+WASSSSVYGLN K+PFSEKDRTDQP+SLYAATKKAGEEIAH
Sbjct: 196 GFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAH 255
Query: 237 TYNHIYGLSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYI 296
TYNHIYGLS+TGLRFFTVYGPWGRPDM YFFFT++ILK K + IFEG NH TVARDFTYI
Sbjct: 256 TYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEGANHGTVARDFTYI 315
Query: 297 DDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXX 356
DDIVKGCL ALD QLRVFNLGN SP PV LVS
Sbjct: 316 DDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILERLLKVKAKR 375
Query: 357 XXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDYYSDSGKKSA 412
+P NGDV FTHAN+S A+RE GYKP+T+LQTGLKKFVRWYL YY GKK A
Sbjct: 376 NMMKLPRNGDVPFTHANISSAQREFGYKPSTDLQTGLKKFVRWYLGYYKQGGKKVA 431
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 1361 (484.2 bits), Expect = 2.1e-141, Sum P(2) = 2.1e-141
Identities = 263/363 (72%), Positives = 288/363 (79%)
Query: 51 WGGAGWEYRVLRSSRPR-SRAGGHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYY 109
+GG WE R+ S+R R S G VLVTGAAGFVGTHVSAAL+RRGDGV+GLDNFNDYY
Sbjct: 74 YGGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYY 133
Query: 110 DTSLKRGRASLLERAGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMS 169
D SLKR R +LLER+G+F+VEGDIND LL KLF +V F+HVMHLAAQAGVRYAM+NP S
Sbjct: 134 DPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSS 193
Query: 170 YVNSNIAGFVNLLEACKTANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKK 229
YV+SNIAGFVNLLE CK+ NPQPAI+WASSSSVYGLN K+PFSEKD+TDQP+SLYAATKK
Sbjct: 194 YVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKDKTDQPASLYAATKK 253
Query: 230 AGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATV 289
AGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDM YFFFTK+ILK K + IFE NH TV
Sbjct: 254 AGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKSISIFESANHGTV 313
Query: 290 ARDFTYIDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXX 349
ARDFTYIDDIVKGCLAALD QLRVFNLGN SP PV LV
Sbjct: 314 ARDFTYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQ 373
Query: 350 XXXXXXXXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDYYSDSGK 409
MP NGDV FTHAN+SLA+RELGYKPTT+LQTGLKKFVRWYL YYS K
Sbjct: 374 LKVKAKKNLIKMPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYYSGDKK 433
Query: 410 KSA 412
+A
Sbjct: 434 AAA 436
Score = 43 (20.2 bits), Expect = 2.1e-141, Sum P(2) = 2.1e-141
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 1 MDKPIYIHRFRYHFSPAK 18
M+K Y+HR R+ S K
Sbjct: 16 MEKSSYLHRLRFQSSLTK 33
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 1380 (490.8 bits), Expect = 4.3e-141, P = 4.3e-141
Identities = 266/362 (73%), Positives = 293/362 (80%)
Query: 51 WGGAGWEYRVLRSSRPRSRAGGHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYD 110
WGG WE RV S+R R+R G VLVTGAAGFVGTHVSAAL+RRGDGV+GLDNFNDYYD
Sbjct: 70 WGGPAWEKRVRSSARLRTRRG-FSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYD 128
Query: 111 TSLKRGRASLLERAGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSY 170
SLKR R +LLER+GVFVVEGDIND+ LL+KLF +V F+HVMHLAAQAGVRYAM+NP SY
Sbjct: 129 PSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSY 188
Query: 171 VNSNIAGFVNLLEACKTANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKA 230
V+SNIAGFVNLLE CK+ANPQPAI+WASSSSVYGLN K+PFSEKDRTDQP+SLYAATKKA
Sbjct: 189 VHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKA 248
Query: 231 GEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVA 290
GEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDM YFFFT++ILK K + IFEG NH TVA
Sbjct: 249 GEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEGVNHGTVA 308
Query: 291 RDFTYIDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXX 350
RDFTYIDDIVKGCL ALD QLRVFNLGN SP PV LV+
Sbjct: 309 RDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILERLL 368
Query: 351 XXXXXXXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDYYSDSGKK 410
+P NGDV FTHAN+S A+RELGYKPTT+LQTGLKKF RWYL YY+ GKK
Sbjct: 369 KVKAKRNIMKLPRNGDVQFTHANISSAQRELGYKPTTDLQTGLKKFARWYLGYYN-GGKK 427
Query: 411 SA 412
+A
Sbjct: 428 AA 429
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 1322 (470.4 bits), Expect = 6.0e-135, P = 6.0e-135
Identities = 251/362 (69%), Positives = 289/362 (79%)
Query: 51 WGGAGWEYRVLRSSRPRSRAGGHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYD 110
+GG+ WE +V +S+RPRS GG VLVTGA+GFVGTHVS ALRRRGDGV+GLDNFN YYD
Sbjct: 75 YGGSHWEKQVRKSARPRSH-GGLTVLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYD 133
Query: 111 TSLKRGRASLLERAGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSY 170
LKR R LLER+GVFVVEGDIND++LL KLF++V F+HVMHLAAQAGVRYAM+NP SY
Sbjct: 134 PKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSY 193
Query: 171 VNSNIAGFVNLLEACKTANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKA 230
VNSNIAGFVNLLE K+ANPQPAI+WASSSSVYGLN K+PFSEKDRTDQP+SLYAATKKA
Sbjct: 194 VNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKA 253
Query: 231 GEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVA 290
GE IAHTYNHIYGLS+TGLRFFTVYGPWGRPDM YFFFTK+ILK K + +FE P+ +VA
Sbjct: 254 GEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKTITVFESPDKGSVA 313
Query: 291 RDFTYIDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXX 350
RDFTYIDDIVKGCL ALD R++NLGN SP PV KLV+
Sbjct: 314 RDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLVTILEKLL 373
Query: 351 XXXXXXXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDYYSDSGKK 410
P+P NGDV FTHAN++LA+ ELGYKP +L+TGLKKFV+WY+ +Y+ S KK
Sbjct: 374 KMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFVKWYMGFYTGSKKK 433
Query: 411 SA 412
S+
Sbjct: 434 SS 435
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 1267 (451.1 bits), Expect = 4.0e-129, P = 4.0e-129
Identities = 243/363 (66%), Positives = 274/363 (75%)
Query: 51 WGGAGWEYRVLRSSRPRSRAGGHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYD 110
WGG WE +V R+S R+GG VLVTGA GFVG+HVS ALR+RGDGVVGLDNFN+YYD
Sbjct: 67 WGGIQWEKQV-RTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYD 125
Query: 111 TSLKRGRASLLERAGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSY 170
SLKR R SLL G+FVVEGD+ND+ LL KLF++V F+HVMHLAAQAGVRYA++NP SY
Sbjct: 126 PSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSY 185
Query: 171 VNSNIAGFVNLLEACKTANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKA 230
V+SNIAG VNLLE CK ANPQPAI+WASSSSVYGLN+K+PFSE DRTDQP+SLYAATKKA
Sbjct: 186 VHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASLYAATKKA 245
Query: 231 GEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVA 290
GEEI HTYNHIYGL+ITGLRFFTVYGPWGRPDM YF FT+NIL+ KP+ I+ G N +A
Sbjct: 246 GEEITHTYNHIYGLAITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIYRGKNRVDLA 305
Query: 291 RDFTYIDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXX 350
RDFTYIDDIVKGCL +LD R+FNLGN SP V LV
Sbjct: 306 RDFTYIDDIVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVDILEKHL 365
Query: 351 XXXXXXXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDYYSDSGKK 410
MP NGDV FTHAN+S AR E GYKPTT+L+TGLKKFVRWYL YY + K
Sbjct: 366 KVKAKRNFVEMPGNGDVPFTHANISSARNEFGYKPTTDLETGLKKFVRWYLSYYGYNTKA 425
Query: 411 SAV 413
V
Sbjct: 426 KLV 428
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 1228 (437.3 bits), Expect = 5.5e-125, P = 5.5e-125
Identities = 236/353 (66%), Positives = 270/353 (76%)
Query: 52 GGAGWEYRVLRSSRPRSRAGGHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDT 111
GGA WE RV +SS + R G VLVTGAAGFVG+H S ALR+RGDGV+G DNFNDYYD
Sbjct: 92 GGAAWEKRVRQSSTAK-RPHGLSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDP 150
Query: 112 SLKRGRASLLERAGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYV 171
SLKR R LLE+ VF+VEGD+ND LL KLF++V F+H++HLAAQAGVRYAMKNP SY+
Sbjct: 151 SLKRARQELLEKQQVFIVEGDLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYI 210
Query: 172 NSNIAGFVNLLEACKTANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAG 231
SNIAGFVNLLE K ANPQPAI+WASSSSVYGLN + PFSE+ RTDQP+SLYAATKKAG
Sbjct: 211 ASNIAGFVNLLEVAKAANPQPAIVWASSSSVYGLNTENPFSEEHRTDQPASLYAATKKAG 270
Query: 232 EEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVAR 291
EEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDM YFFFTK+IL K + I+ ++ VAR
Sbjct: 271 EEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILHGKSIDIYRTQDNQEVAR 330
Query: 292 DFTYIDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXX 351
DFTYIDDIVKGC+ ALD QLRV+NLGN SP PVG+LVS
Sbjct: 331 DFTYIDDIVKGCVGALDTAEKSTGSGGKKRGQAQLRVYNLGNTSPVPVGRLVSILEGLLG 390
Query: 352 XXXXXXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDYY 404
MP NGDV +THANVSLA ++ GYKPTT+L GL+KFV+WY+ YY
Sbjct: 391 TKAKKHLIKMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVGYY 443
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 150/336 (44%), Positives = 204/336 (60%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG-DIN 134
LVTG AGF+G H++ L RGD ++GLDN NDYYD +LK R + L+ F D+
Sbjct: 9 LVTGCAGFIGFHLTKRLLARGDHILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHKLDLA 68
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
D + LF F V+HLAAQAGVRY++ NP +YV+SN+ GF ++LE C+ + + +
Sbjct: 69 DRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILEGCRHQSVKH-L 127
Query: 195 IWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTV 254
++ASSSSVYG N+K PFSE D D P +LYAA+KKA E +AH+Y H++ L TGLRFFTV
Sbjct: 128 VFASSSSVYGANEKYPFSESDNVDHPIALYAASKKANELMAHSYAHLFQLPCTGLRFFTV 187
Query: 255 YGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDX----- 309
YGPWGRPDM F FT+N+L KP+ ++ NH ++RDFTYIDDIV G L LD
Sbjct: 188 YGPWGRPDMALFKFTRNLLADKPIDVY---NHGKMSRDFTYIDDIVDGILLTLDHPPEPN 244
Query: 310 XXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLF 369
R++N+G+ +P + ++ P+ GDV
Sbjct: 245 SAYSANQPNPAKSNAPYRIYNIGSNNPILLTNFIAILEKTLNKKAIKNFLPLQP-GDVPE 303
Query: 370 THANVSLARRELGYKPTTNLQTGLKKFVRWYLDYYS 405
T+A+VS ++ Y+P T LQ G+K FV WYL Y+S
Sbjct: 304 TYADVSQLEKDFQYRPRTPLQKGVKNFVEWYLQYFS 339
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 152/336 (45%), Positives = 202/336 (60%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLE-RAGVFVVEGDI 133
+LVTGAAGF+G H++ L RGD VVGLDN NDYYD +LK R LE R G V +
Sbjct: 4 ILVTGAAGFIGFHLTKRLLDRGDRVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVRTSL 63
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
D LE LF +F V++LAAQAGVRY++ NP +YV+SN+ GF+N+LE C+ +
Sbjct: 64 ADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHHGVKH- 122
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
+++ASSSSVYG N +PFS D P SLYAATKKA E +AHTY+ +YGL TGLRFFT
Sbjct: 123 LVYASSSSVYGANTAMPFSIHHNVDHPVSLYAATKKANELMAHTYSSLYGLPTTGLRFFT 182
Query: 254 VYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXX--- 310
VYGPWGRPDM F FTK IL+ +P+ ++ N + RDFTY+DDIV+G +D
Sbjct: 183 VYGPWGRPDMALFLFTKAILEGRPIDVY---NFGKMQRDFTYVDDIVEGVTRVMDRTPEP 239
Query: 311 --XXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVL 368
R++N+GN +P + + P+ A GDV
Sbjct: 240 NPAWSGARPDPGTSYAPYRIYNIGNNNPVELLAFIEAIEQNLGITAQKNLLPLQA-GDVP 298
Query: 369 FTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDYY 404
T+A+V ++G+KP T + G+++FV WY YY
Sbjct: 299 ATYADVDDLMNDVGFKPATPIGEGIERFVEWYRGYY 334
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 151/336 (44%), Positives = 202/336 (60%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVF-VVEGDIN 134
LVTGAAGF+G +VS L G VVG+DN NDYYD +LK R + LE F ++ D+
Sbjct: 4 LVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKLDLA 63
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
D + KLF F V+HLAAQAGVRY++ NP++Y +SN+ G + +LE C+ + +
Sbjct: 64 DREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIEH-L 122
Query: 195 IWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTV 254
++ASSSSVYGLN+K+PFS +D D P SLYAATKKA E ++HTY+H+Y L TGLRFFTV
Sbjct: 123 VYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRFFTV 182
Query: 255 YGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXXXX 314
YGPWGRPDM F FTK IL + + ++ NH ++RDFTYIDDIV+G + D
Sbjct: 183 YGPWGRPDMALFKFTKAILAGETIDVY---NHGDLSRDFTYIDDIVEGIIRVQDKPPSPT 239
Query: 315 -----XXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLF 369
RVFN+GN SP + ++ PM GDV
Sbjct: 240 PDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKKQFLPMQP-GDVHA 298
Query: 370 THANVSLARRELGYKPTTNLQTGLKKFVRWYLDYYS 405
T A+ + +GYK ++ TG+ KFV WY ++Y+
Sbjct: 299 TWADTEDLFKAVGYKSQVDIDTGVAKFVDWYRNFYA 334
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 151/336 (44%), Positives = 202/336 (60%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVF-VVEGDIN 134
LVTGAAGF+G +VS L G VVG+DN NDYYD +LK R + LE F ++ D+
Sbjct: 4 LVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKLDLA 63
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
D + KLF F V+HLAAQAGVRY++ NP++Y +SN+ G + +LE C+ + +
Sbjct: 64 DREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIEH-L 122
Query: 195 IWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTV 254
++ASSSSVYGLN+K+PFS +D D P SLYAATKKA E ++HTY+H+Y L TGLRFFTV
Sbjct: 123 VYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRFFTV 182
Query: 255 YGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXXXX 314
YGPWGRPDM F FTK IL + + ++ NH ++RDFTYIDDIV+G + D
Sbjct: 183 YGPWGRPDMALFKFTKAILAGETIDVY---NHGDLSRDFTYIDDIVEGIIRVQDKPPSPT 239
Query: 315 -----XXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLF 369
RVFN+GN SP + ++ PM GDV
Sbjct: 240 PDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKKQFLPMQP-GDVHA 298
Query: 370 THANVSLARRELGYKPTTNLQTGLKKFVRWYLDYYS 405
T A+ + +GYK ++ TG+ KFV WY ++Y+
Sbjct: 299 TWADTEDLFKAVGYKSQVDIDTGVAKFVDWYRNFYA 334
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 141/334 (42%), Positives = 195/334 (58%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIND 135
LVTGAAGF+G+ V L G VVG+DN NDYYD +LK+ R + +E A ++ DI D
Sbjct: 4 LVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDIAD 63
Query: 136 SLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAII 195
++ +LF +F V+HLAAQAGVRY+++NPM+Y +SN+ G +N+LE C+ N +I
Sbjct: 64 RNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRN-NQVKHLI 122
Query: 196 WASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVY 255
+ASSSSVYGLN K+PFS KD D P SLYAATKK+ E +AH+Y+H+Y + TGLRFFTVY
Sbjct: 123 YASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMAHSYSHLYNIPTTGLRFFTVY 182
Query: 256 GPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXXXXX 315
G WGRPDM + FTK IL + I N+ + RDFT++DDIV+G + D
Sbjct: 183 GSWGRPDMAPYIFTKKILNGDTIDI---NNNGDMWRDFTHVDDIVEGVIRIADVIPERDA 239
Query: 316 -----XXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFT 370
V+N+G+ SP + V M GDV T
Sbjct: 240 EWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQP-GDVYQT 298
Query: 371 HANVSLARRELGYKPTTNLQTGLKKFVRWYLDYY 404
+A+ + Y P +++ G+ + V W+ D+Y
Sbjct: 299 YADTQDLFKATNYVPKISVKEGVAELVVWFKDFY 332
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 141/334 (42%), Positives = 195/334 (58%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIND 135
LVTGAAGF+G+ V L G VVG+DN NDYYD +LK+ R + +E A ++ DI D
Sbjct: 4 LVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDIAD 63
Query: 136 SLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAII 195
++ +LF +F V+HLAAQAGVRY+++NPM+Y +SN+ G +N+LE C+ N +I
Sbjct: 64 RNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRN-NQVKHLI 122
Query: 196 WASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVY 255
+ASSSSVYGLN K+PFS KD D P SLYAATKK+ E +AH+Y+H+Y + TGLRFFTVY
Sbjct: 123 YASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMAHSYSHLYNIPTTGLRFFTVY 182
Query: 256 GPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXXXXX 315
G WGRPDM + FTK IL + I N+ + RDFT++DDIV+G + D
Sbjct: 183 GSWGRPDMAPYIFTKKILNGDTIDI---NNNGDMWRDFTHVDDIVEGVIRIADVIPERDA 239
Query: 316 -----XXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFT 370
V+N+G+ SP + V M GDV T
Sbjct: 240 EWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQP-GDVYQT 298
Query: 371 HANVSLARRELGYKPTTNLQTGLKKFVRWYLDYY 404
+A+ + Y P +++ G+ + V W+ D+Y
Sbjct: 299 YADTQDLFKATNYVPKISVKEGVAELVVWFKDFY 332
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 132/334 (39%), Positives = 186/334 (55%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG-DI 133
+LVTGAAGF+G+ ++ L + G V G+D F YYD LK RA+ L F +E I
Sbjct: 3 ILVTGAAGFIGSEMALRLLKEGHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLERIRI 62
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
DS +E +F V+H AAQAGVRY++ +P ++++NI G N+++ + Q
Sbjct: 63 EDSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQH- 121
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
++ AS+SS YG N+K PF E+D P ++YAATK A E IAH++ H+YG+ T LRFF+
Sbjct: 122 LVMASTSSAYGANQKFPFEERDSAPYPLTIYAATKLASELIAHSHAHLYGVPTTVLRFFS 181
Query: 254 VYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXXX 313
VYGPWGRPDM +F FT I K +P+ +F NH + RDFTYIDD+V+ +D
Sbjct: 182 VYGPWGRPDMAFFLFTDKIFKGQPIDVF---NHGDLLRDFTYIDDLVEAIRRLMDTPPVV 238
Query: 314 XXXXXXXXXXXQL---RVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFT 370
+ R+ N+GN SP + + M GDV T
Sbjct: 239 GNHIIRGDSLSPVAPYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKNMIDMQP-GDVKQT 297
Query: 371 HANVSLARRELGYKPTTNLQTGLKKFVRWYLDYY 404
A+V L GY P T+ +TG+ +FV WY DY+
Sbjct: 298 FADVRLLDALTGYTPDTDYRTGIARFVDWYRDYF 331
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 282 (104.3 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 80/238 (33%), Positives = 126/238 (52%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGV-F-VVEGDI 133
L+TG AGF+G+++ L + V+GLDNF +L ++ + + F + GDI
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
D + E + N V + V+H AA V ++ +P++ +NI GF+N+L+A K A + +
Sbjct: 79 RDYAICEAVVNGVDY--VLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK-S 135
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
+A+SSS YG + +P E++ P S YA TK E A Y YG GLR+F
Sbjct: 136 FTYAASSSTYGDHPALPKVEQN-IGNPLSPYAVTKYVNELYASVYARTYGFETIGLRYFN 194
Query: 254 VYGPWGRPDMVYFF----FTKNILKRKPVMIFEGPNHATVARDFTYIDDIVK-GCLAA 306
V+G P+ Y +T +++K + V I G + RDF YID++V+ LAA
Sbjct: 195 VFGRRQDPNGAYAAVIPKWTSSMIKGEDVFI-NGDGETS--RDFCYIDNVVQMNILAA 249
Score = 69 (29.3 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 365 GDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDY 403
GDV + A+VS A LGY+ T + G+ + + WY ++
Sbjct: 300 GDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWYKEF 338
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 282 (104.3 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 80/238 (33%), Positives = 126/238 (52%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGV-F-VVEGDI 133
L+TG AGF+G+++ L + V+GLDNF +L ++ + + F + GDI
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
D + E + N V + V+H AA V ++ +P++ +NI GF+N+L+A K A + +
Sbjct: 79 RDYAICEAVVNGVDY--VLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK-S 135
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
+A+SSS YG + +P E++ P S YA TK E A Y YG GLR+F
Sbjct: 136 FTYAASSSTYGDHPALPKVEQN-IGNPLSPYAVTKYVNELYASVYARTYGFETIGLRYFN 194
Query: 254 VYGPWGRPDMVYFF----FTKNILKRKPVMIFEGPNHATVARDFTYIDDIVK-GCLAA 306
V+G P+ Y +T +++K + V I G + RDF YID++V+ LAA
Sbjct: 195 VFGRRQDPNGAYAAVIPKWTSSMIKGEDVFI-NGDGETS--RDFCYIDNVVQMNILAA 249
Score = 69 (29.3 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 365 GDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDY 403
GDV + A+VS A LGY+ T + G+ + + WY ++
Sbjct: 300 GDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWYKEF 338
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 252 (93.8 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 71/239 (29%), Positives = 122/239 (51%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLK--RGRASLLERAGVFVVEGDI 133
L+TG AGF+G+++ L VVGLDNF + + + + S + + V+GDI
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDI 78
Query: 134 NDSLLLEKLFNLVK--FSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
+ + K +++H AA V ++ +P+ ++NI GF+ +L A K +
Sbjct: 79 RQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVK 138
Query: 192 PAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRF 251
+ ++A+SSS YG + +P E D +P S YA TK E A ++ YGL+ TGLR+
Sbjct: 139 -SFVYAASSSTYGDHPALPKVE-DAIGKPLSPYAVTKYVNELYADVFHKTYGLNCTGLRY 196
Query: 252 FTVYGPWGRPDMVYFF----FTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAA 306
F V+G PD Y +T ++ + ++I G + RDF ++++ V+ + A
Sbjct: 197 FNVFGKRQDPDGAYAAVIPKWTVAMIANEELLI-NGDGETS--RDFCFVENAVQANILA 252
Score = 79 (32.9 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 365 GDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDY 403
GDV + A++S A+ +G++P +Q G+ K + WY+ +
Sbjct: 304 GDVRHSQADISKAKSLIGFEPEFKIQQGIDKAMPWYIKF 342
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 252 (93.8 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 71/239 (29%), Positives = 122/239 (51%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLK--RGRASLLERAGVFVVEGDI 133
L+TG AGF+G+++ L VVGLDNF + + + + S + + V+GDI
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDI 78
Query: 134 NDSLLLEKLFNLVK--FSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
+ + K +++H AA V ++ +P+ ++NI GF+ +L A K +
Sbjct: 79 RQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVK 138
Query: 192 PAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRF 251
+ ++A+SSS YG + +P E D +P S YA TK E A ++ YGL+ TGLR+
Sbjct: 139 -SFVYAASSSTYGDHPALPKVE-DAIGKPLSPYAVTKYVNELYADVFHKTYGLNCTGLRY 196
Query: 252 FTVYGPWGRPDMVYFF----FTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAA 306
F V+G PD Y +T ++ + ++I G + RDF ++++ V+ + A
Sbjct: 197 FNVFGKRQDPDGAYAAVIPKWTVAMIANEELLI-NGDGETS--RDFCFVENAVQANILA 252
Score = 79 (32.9 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 365 GDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDY 403
GDV + A++S A+ +G++P +Q G+ K + WY+ +
Sbjct: 304 GDVRHSQADISKAKSLIGFEPEFKIQQGIDKAMPWYIKF 342
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 256 (95.2 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 78/239 (32%), Positives = 118/239 (49%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
I +VTG AGF+G+H+ L G V +DN + +L+ RA+ + F ++ DI
Sbjct: 5 IAIVTGGAGFIGSHMVDLLLDCGFQVRVIDNLKGGHRRNLEH-RANNPDLT--FEIK-DI 60
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
+ LF V + V H A + +++NP+ Y+ +N+ G V +LE + AN +
Sbjct: 61 CELSAPHPLFENVDY--VFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVKK- 117
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
+++A+SSS YGL +P E D P YA +K GEE A + +YGL + +R F
Sbjct: 118 LVYAASSSCYGL-ADVPTRE-DHPIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIFN 175
Query: 254 VYGPWGRPDMVY--FF--FTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
YG R VY F F K L KP + T RDF Y+ D+ + L A +
Sbjct: 176 AYGTRVRTTGVYGAVFGVFFKQKLADKPFTVV---GDGTQRRDFLYVTDVARAFLKAAE 231
Score = 57 (25.1 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 329 FNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFTHANVSLARRELGYKPTTN 388
+NLG +P+ + +LV P D T A++S +R+LG++PT
Sbjct: 239 WNLGAGNPQSINRLVELIGGEVEYIPKR-----PGEPDC--TWADISKIKRDLGWEPTIT 291
Query: 389 LQTGLKKFV 397
G+ + +
Sbjct: 292 FADGVSRMM 300
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 81/229 (35%), Positives = 115/229 (50%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIND 135
LVTGAAGF+G+ + L G VVGLDNF T+L+ L + + VE DI
Sbjct: 4 LVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEH----LADNSAHVFVEADIVT 59
Query: 136 SLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAII 195
+ L + + V HLAAQ VR ++ +P N+ G V L EA + + +
Sbjct: 60 ADL-HAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVH 118
Query: 196 WASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVY 255
+S S+YG + P E TD P+S YAA K AGE +T+ H+YGL + + VY
Sbjct: 119 TSSGGSIYGTPPEYPTPETAPTD-PASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPANVY 177
Query: 256 GPWGRPDM---VYFFFTKNILKRKPVMIF-EGPNHATVARDFTYIDDIV 300
GP P V F + +L KP +F +G N RD+ ++DD+V
Sbjct: 178 GPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGTN----TRDYVFVDDVV 222
Score = 204 (76.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 82/299 (27%), Positives = 126/299 (42%)
Query: 116 GRASLLER----AGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYV 171
GRA+ LE + VE DI + L + + V HLAAQ VR ++ +P
Sbjct: 36 GRATNLEHLADNSAHVFVEADIVTADL-HAILEQHRPEVVFHLAAQIDVRRSVADPQFDA 94
Query: 172 NSNIAGFVNLLEACKTANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAG 231
N+ G V L EA + + + +S S+YG + P E TD P+S YAA K AG
Sbjct: 95 AVNVIGTVRLAEAARQTGVRKIVHTSSGGSIYGTPPEYPTPETAPTD-PASPYAAGKVAG 153
Query: 232 EEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHA---- 287
E +T+ H+YGL + + VYGP R D I + ++ P
Sbjct: 154 EIYLNTFRHLYGLDCSHIAPANVYGP--RQDPHGEAGVVAIFAQ--ALLSGKPTRVFGDG 209
Query: 288 TVARDFTYIDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXX 347
T RD+ ++DD+V + LR FN+G +L S
Sbjct: 210 TNTRDYVFVDDVVDAFVRV------------SADVGGGLR-FNIGTGKETSDRQLHSAVA 256
Query: 348 XXXXXXXXXXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDYYSD 406
P P GD+ + ++ LA R LG++P L G+++ V ++ ++D
Sbjct: 257 AAVGGPDDPEFHP-PRLGDLKRSCLDIGLAERVLGWRPQIELADGVRRTVEYFRHKHTD 314
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 91/347 (26%), Positives = 156/347 (44%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG--- 131
+LVTGAAGF+G+H L G V+ +DNF + + + G A L+R +
Sbjct: 3 ILVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKDVPF 62
Query: 132 ---DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTA 188
D+ D LEK+F+ KF ++HLAA V ++ P+ Y ++N+ +NL++ C
Sbjct: 63 QNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCLKY 122
Query: 189 NPQPAIIWASSSSVYGLNKKIPFSEKDRTDQP-SSLYAATKKAGEEIAHTYNHIYG-LSI 246
N + +++SS++VYG ++P +EK +T Q ++ Y TK E+I ++
Sbjct: 123 NVKN-FVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGKANPEWNV 181
Query: 247 TGLRFFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATV----ARD 292
LR+F G P G P+ + + ++ + + PV+ G TV RD
Sbjct: 182 VLLRYFNPVGAHKSGLIGEDPKGVPNNLMPYVSQVAIGKLPVLTIYGDQFDTVDGTGVRD 241
Query: 293 FTYIDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXX 352
+ ++ D+ KG + A D ++NLG V ++V
Sbjct: 242 YIHVVDLAKGHVKAFDRIKTVGNIGT--------EIYNLGTGVGYSVRQMVDALKKVSGR 293
Query: 353 XXXXXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
+P GDV + + SLA+ +LG++ T L+ W
Sbjct: 294 DIPVKIG-VPRPGDVASVYCDPSLAQEKLGWRAETGLEEMCADLWNW 339
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 235 (87.8 bits), Expect = 9.8e-23, Sum P(2) = 9.8e-23
Identities = 74/236 (31%), Positives = 116/236 (49%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+LVTG AGF+G+ + L + + VV L NF+ S A + + V+ DI
Sbjct: 3 ILVTGGAGFIGSALVRMLIEQTESVV-L-NFDKLTYASHPESLAGVADNERYHFVQADIC 60
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKT-----AN 189
D LE++ + +MHLAA++ V ++ P ++ +NI G LLEAC++
Sbjct: 61 DRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTLGQ 120
Query: 190 PQPA---IIWASSSSVYG-LNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLS 245
Q + S+ V+G L + FSE D PSS Y+A+K + + + ++ Y L
Sbjct: 121 AQQRRFRLHHISTDEVFGSLTETGLFSETSAYD-PSSPYSASKASADHLVRAWHRTYALP 179
Query: 246 ITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVK 301
I YGP+ P+ + N L+ KP+ I+ G N V RD+ Y+DD VK
Sbjct: 180 IVITNCSNNYGPFQYPEKLIPLMVSNALQSKPLPIY-G-NGQQV-RDWLYVDDHVK 232
Score = 69 (29.3 bits), Expect = 9.8e-23, Sum P(2) = 9.8e-23
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 366 DVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLD 402
DV + + S +RELG++P + ++GL+K V W ++
Sbjct: 300 DVRYA-IDASKIQRELGWRPQESFESGLRKTVEWIIN 335
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 74/235 (31%), Positives = 120/235 (51%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
VLVTG GF+G+H+ AL +G V +DN ++ +LK G+ LE ++ G++
Sbjct: 4 VLVTGGCGFIGSHLVDALLSQGFKVRVMDNLSNGSLENLKCGQRDKLE-----IINGNLT 58
Query: 135 DSLLLEKLFNLVKFSH-VMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
D LL+ + VK V HLAA A V+ + K+ + +N NLLEA + N
Sbjct: 59 DKFLLD---SAVKGCETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMRR-NRVDR 114
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
+++ASS++VYG + E P SLY A+K AGE + Y+H+YGL T RF
Sbjct: 115 LVFASSAAVYGESGLTVLDEDYGPLLPISLYGASKLAGEGLISAYSHLYGLKATMFRFAN 174
Query: 254 VYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
+ G ++Y F ++ L++ P + + ++ + ++ D V G L +
Sbjct: 175 IVGSRRHSGVIYDFVSR--LRQNPSSLLV-LGDGSQSKPYLHVSDCVAGMLLGFE 226
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 71/236 (30%), Positives = 122/236 (51%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDY-YDTSLKRGRASLLERAGVFVVEGDI 133
+LVTGA GF+G+H+ +L ++G V L +N + + L++ + L+ + VV GD+
Sbjct: 4 ILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHLEK--SPFLK--DMEVVSGDL 59
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
DS EK+ + + HL A + Y+ P SYV++N+ G +N+LEA K N
Sbjct: 60 RDSFFCEKITKNI--DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKK-NEISH 116
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
I S+S VYG +P EK QP S Y+A+K A + +A +Y + + L++ R F
Sbjct: 117 FIHTSTSEVYGTAFYVPIDEKHPL-QPQSPYSASKIAADMMALSYYNSFNLNVNIARPFN 175
Query: 254 VYGP-WGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
YGP ++ T+ + K + + + + RD ++ D +G ++ L+
Sbjct: 176 TYGPRQSARAIIPTIITQILSGAKEIKLGD----LSPKRDLNFVLDTCEGFISLLN 227
Score = 170 (64.9 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 59/254 (23%), Positives = 111/254 (43%)
Query: 151 VMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWASSSSVYGLNKKIP 210
+ HL A + Y+ P SYV++N+ G +N+LEA K N I S+S VYG +P
Sbjct: 75 IFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKK-NEISHFIHTSTSEVYGTAFYVP 133
Query: 211 FSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGP-WGRPDMVYFFFT 269
EK QP S Y+A+K A + +A +Y + + L++ R F YGP ++ T
Sbjct: 134 IDEKHPL-QPQSPYSASKIAADMMALSYYNSFNLNVNIARPFNTYGPRQSARAIIPTIIT 192
Query: 270 KNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVF 329
+ + K + + + + RD ++ D +G ++ L+ V+
Sbjct: 193 QILSGAKEIKLGD----LSPKRDLNFVLDTCEGFISLLNLKHFG-------------EVY 235
Query: 330 NLGNK---SPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFTHANVSLARRELGYKPT 386
N+G+ S + V L+ P N +V + + ++ ++
Sbjct: 236 NIGSGVEYSMQEVLNLIQKILDSKVKIIQDEQRLRPKNSEVFRLCCDANKLKKATNWQSK 295
Query: 387 TNLQTGLKKFVRWY 400
+L+ GL++ + ++
Sbjct: 296 ISLEEGLRQSIEYF 309
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 230 (86.0 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 65/231 (28%), Positives = 122/231 (52%)
Query: 75 VLVTGAAGFVGTHVSAALRRRG-DG-VVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
+LVTG AGF+G SA +R+ D ++ +D Y L+R + +R + + D
Sbjct: 3 ILVTGGAGFIG---SAFVRKYAYDHELIIVDKLT--YAGDLRRIE-EVRDRIKFY--KAD 54
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
+ D +E++F+ K V+H AA++ V ++++P ++ +N+ G +L+A + +
Sbjct: 55 VADKTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYGIEK 114
Query: 193 AIIWASSSSVYG-LNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRF 251
+ S+ VYG L K+ F+E+ +P+S Y+ +K A + +A Y+ YGL + R
Sbjct: 115 -FVHISTDEVYGELGKEGQFTEESPL-RPNSPYSVSKAAADMLARAYHRTYGLPVIVARP 172
Query: 252 FTVYGPWGRPDMVYFFFTKNILKRKPVMIF-EGPNHATVARDFTYIDDIVK 301
YGPW P+ + K L +P+ ++ +G N R++ Y+DD ++
Sbjct: 173 CNNYGPWQYPEKLIPVVIKKALNNEPIPVYGQGLN----VREWLYVDDCIE 219
Score = 37 (18.1 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 6/32 (18%), Positives = 13/32 (40%)
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWYLDYY 404
N + +K N G++ + WY ++
Sbjct: 278 NSKKIKMNYAWKHKVNFNEGIRFVIDWYKKHF 309
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 251 (93.4 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 93/346 (26%), Positives = 149/346 (43%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYY--DTSLKRG--RASLLERAGVFVVE 130
+LVTG AG++G+H L G V +DN + +L R + + + E
Sbjct: 9 ILVTGGAGYIGSHCVLQLAEAGYEPVVIDNLRNAARGPGALPESLQRVQRIAQTPIAFQE 68
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
DI D L KLF+ +FS VMH A V +++ P+ Y N N+ G + LLEA + +
Sbjct: 69 LDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRRPLEYYNVNLTGTIRLLEAMEAYSV 128
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEE-IAHTYNHIYGLSITGL 249
+ I+++SS++VYG + +P EK ++ Y +K EE I G + L
Sbjct: 129 RN-IVFSSSATVYGDPQYLPLDEKHPVGGCTNPYGKSKYFIEEMIQDLCKAEKGWNAILL 187
Query: 250 RFFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATV----ARDFTY 295
R+F G P G P+ + + + + R+ + G ++ T RD+ +
Sbjct: 188 RYFNPIGAHESGMIGEDPQGIPNNLMPYVAQVAVGRQEFLSVFGNDYETADGTGIRDYIH 247
Query: 296 IDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXX 355
+ D+ KG +AAL +++NLG + V ++V
Sbjct: 248 VVDLAKGHIAALKKLKENCG----------CKIYNLGTGTGYSVLQMVQAMEKASGREIK 297
Query: 356 XXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYL 401
GDV +AN LA RELG+K L + RW L
Sbjct: 298 YKITGR-REGDVAACYANPELAERELGWKAAFGLDKMCEDLWRWQL 342
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 230 (86.0 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 76/243 (31%), Positives = 113/243 (46%)
Query: 72 GHIVLVTGAAGFVGTH-VSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVE 130
G +V G AG +G+H V L+ V+ DNF T +A R ++ +
Sbjct: 6 GKKFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNF--VRGTRENLAQALRDPRTKIYDIG 63
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
GDIN + +L V V H AA + + P S +NI G N+LE C A
Sbjct: 64 GDINQTDILNTALKGV--DGVFHFAA-LWLLQCYEYPRSAFQTNIQGTFNVLETC-VAQG 119
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
++++SS+SVYG + P +E + + Y ATK AGE +A Y+H YGL GLR
Sbjct: 120 VKRLVFSSSASVYGDALEEPMTEAHPFNS-RTFYGATKIAGEAMATAYHHRYGLPFVGLR 178
Query: 251 FFTVYGPWGRPDM--VYFFFTKNIL----KRKPVMIFEGPNHATVARDFTYIDDIVKGCL 304
+ VYGP R D Y +L K +P+ ++ + A DF Y++D +
Sbjct: 179 YMNVYGP--RQDYRGAYIAVIMKMLDALDKGQPMTLY---GDGSQAYDFVYVEDCAAANI 233
Query: 305 AAL 307
A+
Sbjct: 234 CAM 236
Score = 49 (22.3 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 8/37 (21%), Positives = 19/37 (51%)
Query: 377 ARRELGYKPTTNLQTGLKKFVRWYLDYYSDSGKKSAV 413
A ++G+K L GL++ + W + ++ ++ V
Sbjct: 292 AAEQIGFKAEVGLTEGLQRLIEWRRSHIAEVEQRREV 328
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 243 (90.6 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 88/342 (25%), Positives = 150/342 (43%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAG-VFVVEGDI 133
VLVTG AG++G+H L G V +DN+++ SL+R + E + + D+
Sbjct: 5 VLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDL 64
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
D LEK+F+ KF V+H A V +++ P+ Y N+NI G V LLE +
Sbjct: 65 RDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKN- 123
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYG-LSITGLRFF 252
++++SS++VYG K++P +E+ + Y TK EEI + I LR+F
Sbjct: 124 LVFSSSATVYGWPKEVPCTEESPISATNP-YGRTKLFIEEICRDVHRSDSEWKIILLRYF 182
Query: 253 TVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATV----ARDFTYIDD 298
G P G P+ + + + + R+P + G ++ T RD+ ++ D
Sbjct: 183 NPVGAHPSGYIGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVRDYIHVMD 242
Query: 299 IVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXX-XXX 357
+ G +AAL V+NLG + V ++V+
Sbjct: 243 LADGHIAAL---------RKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGKKIPLVM 293
Query: 358 XXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
P + +V++ A+ A REL +K ++ + W
Sbjct: 294 AGRRPGDAEVVY--ASTEKAERELNWKAKNGIEEMCRDLWNW 333
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 243 (90.6 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 91/347 (26%), Positives = 156/347 (44%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYY----DTSLKRGRASLLERAGVFVVE 130
+LVTG G++G+H L G V +DNF++ D R + E
Sbjct: 5 ILVTGGGGYIGSHCVVELIEAGFHPVVIDNFSNAVRGEGDVPESLRRIEKFMDTQIEFHE 64
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
D+ D LEK+F + F VMH A V +++ P+ Y N+ G +NLLE ++
Sbjct: 65 LDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQSHGV 124
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAH---TYNHIYGLSIT 247
+ ++++SS++VYG +K+P E+ ++ Y TK EE+ T + +
Sbjct: 125 RN-LVFSSSATVYGDPQKLPIDEQHPVGGCTNPYGKTKYFIEEMIRDQCTAEKDWNAVL- 182
Query: 248 GLRFFTVYG----------PWGRPDMVYFFFTKNIL-KRKPVMIFEGPNHATV----ARD 292
LR+F G P G P+ + + + + +RK + +F G +++T RD
Sbjct: 183 -LRYFNPIGAHISGQIGEDPQGIPNNLLPYVAQVAIGRRKHLNVF-GNDYSTPDGTGVRD 240
Query: 293 FTYIDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXX 352
+ ++ D+ KG +AA+ +V+NLG + V ++VS
Sbjct: 241 YIHVVDLAKGHIAAVRKLKDSCG----------CKVYNLGTGTGYSVLQMVSAMEKASGR 290
Query: 353 XXXXXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
P +GDV +A+ SLA +ELG+K +L+ + RW
Sbjct: 291 KIAYQIAPR-RSGDVASCYADASLAEKELGWKAEFDLERMCEDLWRW 336
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 237 (88.5 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 67/248 (27%), Positives = 128/248 (51%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
++LVTG AG++G+H+ L + + V+ +DN L +G ++ +V GD
Sbjct: 1 MILVTGGAGYIGSHIVRQLCLKNEKVLVVDN--------LSKGHKKAVDTRAKLIV-GDF 51
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
D LL ++F V+H+AAQ+ V +M P Y NI+ ++LL+ AN +
Sbjct: 52 GDENLLLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKK- 110
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
++++S+++VYG +K P +E D +P+++Y +K E+ Y I+G + LR+F
Sbjct: 111 MVFSSTAAVYGEPEKWPITE-DFPQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYFN 169
Query: 254 VYG--PWG------RPD--MVYFFFTKNILKRKPVMIF--EGPN-HATVARDFTYIDDIV 300
G P G P+ ++ F + +++ + +F + P T RD+ +++D+
Sbjct: 170 AAGADPSGDIGEDHNPETHLIPLIFKVILGEQEELTVFGTDYPTPDGTCIRDYIHVNDLA 229
Query: 301 KGCLAALD 308
+ + AL+
Sbjct: 230 EAHILALN 237
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 239 (89.2 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 91/343 (26%), Positives = 150/343 (43%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLER-AGV--FVVEG 131
VLVTG +G++G+H L + G VV LDN + KR ++ER +G VEG
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQSGHDVVILDNL-----CNSKRSVLPVIERLSGKQPTFVEG 57
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
DI + L+ ++ + V+H A V ++ P+ Y ++N+ G + L+ A + AN +
Sbjct: 58 DIRNEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 192 PAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYG-LSITGLR 250
I++SS++VYG KIP+ E T P S Y +K E+I SI LR
Sbjct: 118 N-FIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLR 176
Query: 251 FFTVYG----------PWGRPD-MVYFFFTKNILKRKPVMIFEG---PNHATVARDFTYI 296
+F G P G P+ ++ + + +R + IF P AT RD+ ++
Sbjct: 177 YFNPVGAHPSGDMGEDPQGIPNNLIPYIAQVAVGRRDSLAIFGNDYPPEDATAVRDYIHV 236
Query: 297 DDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXX 356
D+ G +AA+ + ++NLG V +V+
Sbjct: 237 MDLADGHVAAMQQLADKPG----------VHIYNLGAGIGSSVLDVVNAFSKACGKPVKY 286
Query: 357 XXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
P +GD+ A+ + A +EL ++ T L + W
Sbjct: 287 HFAPR-RDGDLPAYWADATKADKELNWRVTRTLDEMAQDTWHW 328
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 221 (82.9 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 72/235 (30%), Positives = 106/235 (45%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDG--VVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
VLVTG AGF+ +HV +L +V LD + Y SLK ++ ++ ++GD
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLD--YCASLKN-LETISDKQNYKFIQGD 76
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
I DS ++ LF K V+H AAQ V + + N+ G LL A A +
Sbjct: 77 ICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSAAHEARVEK 136
Query: 193 AIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFF 252
I+ S+ VYG + F E QP++ YA++K A E +Y Y + R
Sbjct: 137 -FIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 194
Query: 253 TVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAAL 307
VYGP P+ V F ++L+ G T R+F Y D+V+ L L
Sbjct: 195 NVYGPHQYPEKVIPKFI-SLLQHNRKCCIHGSGLQT--RNFLYATDVVEAFLTVL 246
Score = 54 (24.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 381 LGYKPTTNLQTGLKKFVRWYLDYY 404
LG++P + G+KK + WY + +
Sbjct: 312 LGWRPKVPWKEGIKKTIEWYRENF 335
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 236 (88.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 89/344 (25%), Positives = 149/344 (43%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAG----VFVVE 130
VLVTG +G++G+H L + G V+ LDN + KR ++ER G FV E
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNL-----CNSKRSVLPVIERLGGKHPTFV-E 56
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
GDI + L+ ++ + V+H A V +++ P+ Y ++N+ G + L+ A + AN
Sbjct: 57 GDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANV 116
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIY-GLSITGL 249
+ I++SS++VYG KIP+ E T P S Y +K E+I SI L
Sbjct: 117 KN-FIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 250 RFFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATV----ARDFTY 295
R+F G P G P+ + + + + R+ + G ++ T RD+ +
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 296 IDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXX 355
+ D+ G + A++ + ++NLG V +V+
Sbjct: 236 VMDLADGHVVAMEKLANKPG----------VHIYNLGAGVGNSVLDVVNAFSKACGKPVN 285
Query: 356 XXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
P GD+ A+ S A REL ++ T L + W
Sbjct: 286 YHFAPR-REGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 237 (88.5 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 90/344 (26%), Positives = 147/344 (42%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYY--DTSLKRGRASLLERAG--VFVVE 130
VLVTG AG++G+H L G V +DNF++ + S+ + E G V E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFEE 64
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
DI D L+ LF F V+H A V +++ P+ Y N+ G + LLE + A+
Sbjct: 65 MDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR-AHG 123
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHI-YGLSITGL 249
+++++SS++VYG + +P E T ++ Y +K EE+ + L
Sbjct: 124 VKSLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIQDLCRADTAWNAVLL 183
Query: 250 RFFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATV----ARDFTY 295
R+F G P G P+ + + ++ + R+ + G ++AT RD+ +
Sbjct: 184 RYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRDYIH 243
Query: 296 IDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXX 355
+ D+ KG +AAL R++NLG + V ++V
Sbjct: 244 VVDLAKGHIAALKKLKEQCG----------CRIYNLGTGTGYSVLQMVQAMEKASGKKIP 293
Query: 356 XXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
GDV +AN SLA ELG+ L + RW
Sbjct: 294 YKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 336
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 233 (87.1 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 72/238 (30%), Positives = 112/238 (47%)
Query: 75 VLVTGAAGFVGTHVSAALRRR--GDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
+L+TG AGF+G+H++ L ++ ++ LD DY G +L+ +G+
Sbjct: 12 ILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKL-DYCSNINNLG--CVLKELNFKFYKGN 68
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
I DS LLE +F K V+HLAA V + K + + +NI G LLE CK +
Sbjct: 69 ILDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCKNYKLKK 128
Query: 193 AIIWASSSSVYGL---------NKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIY 242
I+ S+ VYG N I S +++ P++ Y+A+K E + +Y +
Sbjct: 129 -FIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSF 187
Query: 243 GLSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIV 300
L + R +YGP P+ + F +L K I G T R++ YIDDIV
Sbjct: 188 KLPVIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTI-HGTGKNT--RNYLYIDDIV 242
Score = 44 (20.5 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 373 NVSLAR-RELGYKPTTNLQTGLKKFVRWY 400
N++ ++ LG+K + + + G++K WY
Sbjct: 334 NINYSKLSNLGWKKSISWEEGIEKTFIWY 362
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 230 (86.0 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 77/245 (31%), Positives = 121/245 (49%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNF----NDYYDTSLKRGRASLLERAGVFVVEG 131
L+TG AGF+G+H++ L RG V +DNF N Y+D +K R V+
Sbjct: 6 LITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKNKYHDELMKEIR----------VIPI 55
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
+ D + +L N + V HLAA GV+ M+ + + +N G N+L+A +
Sbjct: 56 SVLDKNSIYELVN--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKK 113
Query: 192 PAIIWASSSSVYGLNKKIPFSEK-DR----TDQPSSLYAATKKAGEEIAHTYNHIYGLSI 246
+++AS+S VYG K PFSE+ DR T + YA K E + Y + GL +
Sbjct: 114 --VVFASTSEVYG-KAKPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYA-LEGLPV 169
Query: 247 TGLRFFTVYGPWGRPDM---VYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGC 303
T +R+F +YGP + V F L+ + ++++ G T R FTY+ D V+
Sbjct: 170 TIVRYFNIYGPRAKDGPYAGVIPRFISAALQGEDILVY-GDGEQT--RCFTYVSDAVEAT 226
Query: 304 LAALD 308
+ A+D
Sbjct: 227 IRAMD 231
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 220 (82.5 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 70/238 (29%), Positives = 114/238 (47%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDG--VVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
VLVTG AGF+G+H+ AL R ++ +DN Y ++LK R S+ + + GD
Sbjct: 9 VLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQ--YCSNLKNLR-SVQASSSYSFIPGD 65
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
+ D L ++ LF+ V H AA+ V + P ++ N+ G L+ A A+ Q
Sbjct: 66 VCDPLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASVQ- 124
Query: 193 AIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTY--NHIYGLSITGLR 250
I+ S+ VYG + PF E +P++ Y+ +K A E I +Y H + IT R
Sbjct: 125 RFIYISTDEVYGDSVDQPFDELS-PKRPTNPYSRSKAAAESIVTSYWLKHKFPAVIT--R 181
Query: 251 FFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
VYGP + V F ++L+++ +G +R F Y+ D+ L ++
Sbjct: 182 SSNVYGPRQHHEKVIPRFL-SLLQQQQKCTIQGSG--LQSRHFLYVSDVTDAFLTVME 236
Score = 49 (22.3 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 375 SLARRELGYKPTTNLQTGLKKFVRWY 400
S+ LG++P G+++ V+WY
Sbjct: 295 SVKLHRLGWRPKVAWTEGIRRTVQWY 320
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 234 (87.4 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 90/328 (27%), Positives = 147/328 (44%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASL---LERAGVFVVEG 131
+LVTG AGF+GTH L + G V +DNF++ ++ R R + L + F + G
Sbjct: 9 ILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNL-G 67
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
D+ + +EKLF+ +F V+H A V +++NP Y ++N+ G +NL E N +
Sbjct: 68 DLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 192 PAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYG-LSITGLR 250
++++SS++VYG +KIP E D + + Y TK EEIA I LR
Sbjct: 128 -MMVFSSSATVYGQPEKIPCME-DFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILLR 185
Query: 251 FFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHAT----VARDFTYI 296
+F G P G P+ + + + + R P + G ++ T RD+ ++
Sbjct: 186 YFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIHV 245
Query: 297 DDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXX 356
D+ G +AAL +NLG V ++V+
Sbjct: 246 MDLADGHIAALRKLFADPKIGCTA--------YNLGTGQGTSVLEMVAAFEKASGKKIPI 297
Query: 357 XXXPMPANGDVLFTHANVSLARRELGYK 384
P +GD +A+ A +ELG+K
Sbjct: 298 KLCPR-RSGDATAVYASTEKAEKELGWK 324
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 232 (86.7 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 90/344 (26%), Positives = 148/344 (43%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYY--DTSLKRGRASLLERAG--VFVVE 130
VLVTG AG++G+H L G V +DNF++ S+ + E G V E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGKGSMPESLQRVQELTGRSVEFEE 64
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
DI D L++LF F+ V+H A V +++ P+ Y N+ G + LLE + A+
Sbjct: 65 MDILDQAALQRLFEKHSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGSIQLLEIMR-AHG 123
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHI-YGLSITGL 249
++++SS++VYG + +P E T ++ Y +K EE+ + L
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKYFIEEMIRDLCQADKAWNAVLL 183
Query: 250 RFFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNH----ATVARDFTY 295
R+F G P G P+ + + ++ + R+ V+ G ++ T RD+ +
Sbjct: 184 RYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGVRDYIH 243
Query: 296 IDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXX 355
+ D+ KG +AAL R++NLG + V ++V
Sbjct: 244 VVDLAKGHIAALRKLKEQCG----------CRIYNLGTGTGYSVLQMVEAMKKASGQEIP 293
Query: 356 XXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
GDV +AN SLA +ELG+ L + RW
Sbjct: 294 YKVVAR-REGDVAACYANPSLALKELGWTAVLGLDRMCEDLWRW 336
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 232 (86.7 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 92/344 (26%), Positives = 149/344 (43%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYY--DTSLKRGRASLLERAG--VFVVE 130
VLVTG AG++G+H L G V +DNF++ + SL + E G V E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
DI D L++LF F V+H A V +++ P+ Y N+ G + LLE K A+
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHG 123
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAH-------TYNHIY- 242
++++SS++VYG + +P E T ++ Y +K EE+ T+N +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLL 183
Query: 243 -GLSITGLRFFTVYG--PWGRPDMVYFFFTKNILKRKPVMIFEGPNH----ATVARDFTY 295
+ TG G P G P+ + + ++ + R+ + G ++ T RD+ +
Sbjct: 184 RYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIH 243
Query: 296 IDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXX 355
+ D+ KG +AAL R++NLG + V ++V
Sbjct: 244 VVDLAKGHIAALRKLKEQCG----------CRIYNLGTGTGYSVLQMVQAMEKASGKKIP 293
Query: 356 XXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
GDV +AN SLA+ ELG+ L + RW
Sbjct: 294 YKVVAR-REGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRW 336
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 231 (86.4 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 90/344 (26%), Positives = 145/344 (42%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYY--DTSLKRGRASLLERAG--VFVVE 130
VLVTG AG++G+H L G V +DNF++ + S+ + E G V E
Sbjct: 4 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQELTGRSVEFEE 63
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
DI D L+ LF F V+H A V +++ P+ Y N+ G + LLE + A+
Sbjct: 64 MDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR-AHG 122
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHI-YGLSITGL 249
++++SS++VYG + +P E T ++ Y +K EE+ + L
Sbjct: 123 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAWNAVLL 182
Query: 250 RFFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATV----ARDFTY 295
R+F G P G P+ + + ++ + R+ + G ++AT RD+ +
Sbjct: 183 RYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRDYIH 242
Query: 296 IDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXX 355
+ D+ KG +AAL R +NLG + V ++V
Sbjct: 243 VVDLAKGHIAALKKLKEQCG----------CRTYNLGTGTGYSVLQMVQAMEKASGKKIP 292
Query: 356 XXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
GDV +AN SLA ELG+ L + RW
Sbjct: 293 YKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 222 (83.2 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 73/232 (31%), Positives = 103/232 (44%)
Query: 75 VLVTGAAGFVGTHVSAAL-RRRGD-GVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
+L+TGAAGF+ +HV+ L R D +V LD + Y + LK S FV +GD
Sbjct: 11 ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLD--YCSDLKNLDPSFSSPNFKFV-KGD 67
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
I L+ L +MH AAQ V + N + +NI G LLEACK
Sbjct: 68 IASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 127
Query: 193 AIIWASSSSVYGLNKKIPFSEKDRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
I S+ VYG + Q P++ Y+ATK E + Y YGL + R
Sbjct: 128 RFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 187
Query: 251 FFTVYGPWGRPDMVYFFFTKNILKRKPVMIF-EGPNHATVARDFTYIDDIVK 301
VYGP P+ + F + KP+ I +G N R + Y +D+ +
Sbjct: 188 GNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSN----VRSYLYCEDVAE 235
Score = 59 (25.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 379 RELGYKPTTNLQTGLKKFVRWY 400
++LG++ TN + GLKK + WY
Sbjct: 300 KKLGWQERTNWEDGLKKTMDWY 321
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 230 (86.0 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 90/344 (26%), Positives = 147/344 (42%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYY--DTSLKRGRASLLERAG--VFVVE 130
VLVTG AG++G+H L G V +DNF++ +S+ + E G V E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGGSSMPESLRRVQELTGRSVEFEE 64
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
DI D L++LF F V+H A V +++ P+ Y N+ G + LLE K A+
Sbjct: 65 MDILDQAALQRLFKKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHG 123
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHI-YGLSITGL 249
++++SS++VYG + +P E T ++ Y +K EE+ + L
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNAVLL 183
Query: 250 RFFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNH----ATVARDFTY 295
R+F G P G P+ + + ++ + R+ + G ++ T RD+ +
Sbjct: 184 RYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIH 243
Query: 296 IDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXX 355
+ D+ KG +AAL R++NLG + V ++V
Sbjct: 244 VVDLAKGHIAALRKLKEQCG----------CRIYNLGTGTGYSVLQMVRAMEKASGKKIP 293
Query: 356 XXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
GDV +AN SLA +ELG+ L + RW
Sbjct: 294 YKVVAR-REGDVAACYANPSLALKELGWTAALGLDRMCEDLWRW 336
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 224 (83.9 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 73/232 (31%), Positives = 106/232 (45%)
Query: 75 VLVTGAAGFVGTHVSAAL-RRRGD-GVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
+L+TGAAGF+ +HV+ L R D +V LD + Y ++LK S FV +GD
Sbjct: 9 ILITGAAGFIASHVANRLVRSYPDYKIVVLDKLD--YCSNLKNLNPSKSSPNFKFV-KGD 65
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
I + L+ L + +MH AAQ V + N + +NI G LLEACK
Sbjct: 66 IASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
Query: 193 AIIWASSSSVYGLNKKIPFSEKDRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
I S+ VYG + Q P++ Y+ATK E + Y YGL + R
Sbjct: 126 RFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
Query: 251 FFTVYGPWGRPDMVYFFFTKNILKRKPVMIF-EGPNHATVARDFTYIDDIVK 301
VYGP P+ + F + KP+ I +G N R + Y +D+ +
Sbjct: 186 GNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSN----VRSYLYCEDVAE 233
Score = 55 (24.4 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 379 RELGYKPTTNLQTGLKKFVRWYLD 402
++LG+ TN + GL+K + WY +
Sbjct: 298 KKLGWCERTNWEEGLRKTMEWYTE 321
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 212 (79.7 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 69/235 (29%), Positives = 105/235 (44%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDG--VVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
VLVTG AGF+ +H+ +L ++ LD + Y SLK ++ + ++GD
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLD--YCASLKN-LETISNKQNYKFIQGD 76
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
I DS ++ LF K V+H AAQ V + + N+ G L+ A A +
Sbjct: 77 ICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEK 136
Query: 193 AIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFF 252
I+ S+ VYG + F E QP++ YA++K A E +Y Y + R
Sbjct: 137 -FIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSS 194
Query: 253 TVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAAL 307
VYGP P+ V F ++L+ G T R+F Y D+V+ L L
Sbjct: 195 NVYGPHQYPEKVIPKFI-SLLQHNRKCCIHGSGLQT--RNFLYATDVVEAFLTVL 246
Score = 54 (24.1 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 381 LGYKPTTNLQTGLKKFVRWYLDYY 404
LG++P + G+KK + WY + +
Sbjct: 312 LGWRPKVPWKEGIKKTIEWYRENF 335
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 229 (85.7 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 90/328 (27%), Positives = 146/328 (44%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASL---LERAGVFVVEG 131
+LVTG AGF+GTH L +G V +DN ++ ++ R R + L F + G
Sbjct: 9 ILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNL-G 67
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
D+ + +EKLF+ +F V+H A V ++ NP Y ++N+ G +NL E N +
Sbjct: 68 DLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 192 PAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYG-LSITGLR 250
++++SS++VYG + +P E D Q + Y TK EEIA + I LR
Sbjct: 128 -MMVFSSSATVYGQPEIVPCVE-DFELQAMNPYGRTKLFLEEIARDIHAAEPEWKIILLR 185
Query: 251 FFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATV----ARDFTYI 296
+F G P G P+ + + + + R P + G ++ T+ RD+ ++
Sbjct: 186 YFNPVGAHESGRIGEDPKGIPNNLMPYIQQVAVGRLPELNVFGHDYPTMDGSAVRDYIHV 245
Query: 297 DDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXX 356
D+ G +AAL+ +NLG V ++VS
Sbjct: 246 MDLADGHVAALNKLFSDSKIGCTA--------YNLGTGQGTSVLEMVSSFEKASGKKIPI 297
Query: 357 XXXPMPANGDVLFTHANVSLARRELGYK 384
P A GD +A+ A +ELG+K
Sbjct: 298 KLCPRRA-GDATAVYASTQKAEKELGWK 324
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 213 (80.0 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 67/235 (28%), Positives = 109/235 (46%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDG--VVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
+LVTG AGF+ +HV +L R ++ LD + Y SLK ++ E+ ++GD
Sbjct: 25 LLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLD--YCASLKN-LETVSEKENYKFIQGD 81
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
I + +++LF K V+H AAQ V + + + + N+ G L+ A AN +
Sbjct: 82 ICEPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAAHEANVEK 141
Query: 193 AIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFF 252
++ S+ VYG + F E P++ YA++K A E +Y Y + R
Sbjct: 142 -FVYVSTDEVYGGSTDQEFDESS-PKCPTNPYASSKAAAECFVQSYWERYQFPVVITRSS 199
Query: 253 TVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAAL 307
VYGP P+ V F ++L++ G R+F Y D+V+ L L
Sbjct: 200 NVYGPHQYPEKVIPKFI-SLLQQNRKCCIHGSG--LQRRNFLYATDVVEAFLTVL 251
Score = 54 (24.1 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 381 LGYKPTTNLQTGLKKFVRWYLDYY 404
LG++P + G+KK + WY + +
Sbjct: 317 LGWRPKVPWKEGIKKTIEWYKENF 340
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 209 (78.6 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 75/248 (30%), Positives = 109/248 (43%)
Query: 62 RSSRPRSRAGGHIVLVTGAAGFVGTHVSAALRRRGDG--VVGLDNFNDYYDTSLKRGRAS 119
RS P S A VLVTG AGF+ +HV +L +V LD + Y SLK
Sbjct: 9 RSGPPGSFAKR--VLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLD--YCASLKN-LEP 63
Query: 120 LLERAGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFV 179
+ + ++GDI DS ++ LF + K V+H AAQ V + + N+ G
Sbjct: 64 VSNKQNYKFIQGDICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTH 123
Query: 180 NLLEACKTANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYN 239
L+ A A + I+ S+ VYG + F E QP++ YA++K A E +Y
Sbjct: 124 VLVNAAYEAGVEK-FIYVSTDEVYGGSLDQEFDESS-PKQPTNPYASSKAAAECFVQSYW 181
Query: 240 HIYGLSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDI 299
Y + R VYGP P+ V F ++L+ G R+F Y D+
Sbjct: 182 ERYKFPVVITRSSNVYGPHQYPEKVIPKFI-SLLQHNRKCCIHGSG--LQRRNFLYAADV 238
Query: 300 VKGCLAAL 307
V+ L L
Sbjct: 239 VEAFLTVL 246
Score = 58 (25.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 381 LGYKPTTNLQTGLKKFVRWY 400
LG+KP + G+KK V WY
Sbjct: 312 LGWKPKVPWEEGIKKTVEWY 331
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 212 (79.7 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 69/235 (29%), Positives = 105/235 (44%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDG--VVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
VLVTG AGF+ +H+ +L ++ LD + Y SLK ++ + ++GD
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLD--YCASLKN-LETISNKQNYKFIQGD 76
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
I DS ++ LF K V+H AAQ V + + N+ G L+ A A +
Sbjct: 77 ICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEK 136
Query: 193 AIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFF 252
I+ S+ VYG + F E QP++ YA++K A E +Y Y + R
Sbjct: 137 -FIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSS 194
Query: 253 TVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAAL 307
VYGP P+ V F ++L+ G T R+F Y D+V+ L L
Sbjct: 195 NVYGPHQYPEKVIPKFI-SLLQHNRKCCIHGTGLQT--RNFLYATDVVEAFLTVL 246
Score = 54 (24.1 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 381 LGYKPTTNLQTGLKKFVRWYLDYY 404
LG++P + G+KK + WY + +
Sbjct: 312 LGWRPKVPWKEGIKKTIEWYRENF 335
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 227 (85.0 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 73/249 (29%), Positives = 121/249 (48%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAG-VFVVEGDI 133
VLV+G AG++G+H L G VV +DN ++ SL+R + E + + D+
Sbjct: 6 VLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVDL 65
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
D LEK+F+ KF V+H A V +++ P+ Y N+N+ G + LLE +
Sbjct: 66 RDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKN- 124
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAH-TYNHIYGLSITGLRFF 252
++++SS++VYG K++P +E+ + Y TK EEI Y I LR+F
Sbjct: 125 LVFSSSATVYGSPKEVPCTEEFPISALNP-YGRTKLFIEEICRDVYGSDPEWKIILLRYF 183
Query: 253 TVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNH----ATVARDFTYIDD 298
G P G P+ + F + + R+P + G ++ T RD+ ++ D
Sbjct: 184 NPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVRDYIHVID 243
Query: 299 IVKGCLAAL 307
+ G +AAL
Sbjct: 244 LADGHIAAL 252
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 188 (71.2 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 64/234 (27%), Positives = 106/234 (45%)
Query: 75 VLVTGAAGFVGTHVSA-ALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+LVTG AGF+G+ V +R D VV LD Y +L+ + + + DI
Sbjct: 4 ILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLT--YAGNLE-SLTDIADNPRYAFEQVDI 60
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ-P 192
D L+++F + VMHLAA++ V ++ + ++ +NI G NLLEA + Q P
Sbjct: 61 CDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMP 120
Query: 193 A-------IIWASSSSVYG-LNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGL 244
+ S+ VYG L+ + PSS Y+A+K + + + + YGL
Sbjct: 121 SEKHEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGL 180
Query: 245 SITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDD 298
YGP+ P+ + N L KP+ ++ RD+ +++D
Sbjct: 181 PTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVY---GDGMQIRDWLFVED 231
Score = 81 (33.6 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 378 RRELGYKPTTNLQTGLKKFVRWYLD 402
RR+LG++P ++GL+K V+WYLD
Sbjct: 309 RRDLGWQPLETFESGLRKTVQWYLD 333
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 204 (76.9 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 64/232 (27%), Positives = 113/232 (48%)
Query: 75 VLVTGAAGFVGTH-VSAALRRR-GDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
VLVTG AGF+G++ ++ L G V+ LD Y +L R ++ + V+GD
Sbjct: 10 VLVTGGAGFIGSNFINHFLPANPGCRVINLDILT--YAGNL-RNLTAVEQNPAYRFVKGD 66
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
I D+ L+ ++ + V+H AA++ V ++ P +V +N+ G LLE +
Sbjct: 67 IGDADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWESG 126
Query: 193 AI-----IWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSIT 247
AI + S+ VYG + + ++ P+S Y+A+K + + YN +GL +
Sbjct: 127 AIERFRFLHVSTDEVYGTLGETGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLPVL 186
Query: 248 GLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIF-EGPNHATVARDFTYIDD 298
R YGP+ P+ + NI+ KP+ ++ +G N RD+ ++ D
Sbjct: 187 TTRCSNNYGPFQFPEKLIPLMIHNIVAGKPLPVYGDGRN----VRDWLHVKD 234
Score = 62 (26.9 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 378 RRELGYKPTTNLQTGLKKFVRWYL 401
+RELG++P+ + G+ + V WYL
Sbjct: 309 KRELGWEPSYTFERGIAETVDWYL 332
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 205 (77.2 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 73/248 (29%), Positives = 108/248 (43%)
Query: 62 RSSRPRSRAGGHIVLVTGAAGFVGTHVSAALRRRGDG--VVGLDNFNDYYDTSLKRGRAS 119
RS P S A VLVTG AGF+ +HV +L ++ LD + Y SLK
Sbjct: 9 RSGPPGSFAKR--VLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLD--YCASLKN-LEP 63
Query: 120 LLERAGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFV 179
+ + ++GDI DS +++LF K V+H AAQ V + + N+ G
Sbjct: 64 VSNKQNYKFIQGDICDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTH 123
Query: 180 NLLEACKTANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYN 239
L+ A + I+ S+ VYG + F E QP++ YA++K A E +Y
Sbjct: 124 VLVNTAYEARVEK-FIYVSTDEVYGGSLDQEFDESS-PKQPTNPYASSKAAAECFVQSYW 181
Query: 240 HIYGLSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDI 299
Y + R VYGP P+ V F ++L+ G R+F Y D+
Sbjct: 182 ERYKFPVVITRSSNVYGPHQYPEKVIPKFI-SLLQHDRKCCIHGSG--LQRRNFLYAADV 238
Query: 300 VKGCLAAL 307
V+ L L
Sbjct: 239 VEAFLTVL 246
Score = 59 (25.8 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 381 LGYKPTTNLQTGLKKFVRWYLDYY 404
LG+KP + G+KK V WY + +
Sbjct: 312 LGWKPKVPWEEGIKKTVEWYRENF 335
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 225 (84.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 91/346 (26%), Positives = 150/346 (43%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYY------DTSLKRGRASLLERAGVFV 128
VLVTG AG++G+H L G + +DNF++ SL+R + L R+ F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPMVIDNFHNAIRGGGSMPESLRRVQ-DLTGRSVEFE 63
Query: 129 VEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTA 188
E DI D L++LF F V+H A V +++ P+ Y N+ G + LLE + A
Sbjct: 64 -EMDILDQAALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR-A 121
Query: 189 NPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHI-YGLSIT 247
+ ++++SS++VYG + +P E T ++ Y +K EE+ +
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNAV 181
Query: 248 GLRFFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNH----ATVARDF 293
LR+F G P G P+ + + ++ + R+ V+ G ++ T RD+
Sbjct: 182 LLRYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGVRDY 241
Query: 294 TYIDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXX 353
++ D+ KG +AAL R++NLG + V ++V
Sbjct: 242 IHVVDLAKGHIAALRKLKEQCG----------CRIYNLGTGTGYSVLQMVQAMEKASGKK 291
Query: 354 XXXXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
GDV +AN SLA +ELG+ L + RW
Sbjct: 292 IPYKVVAR-REGDVAACYANPSLALKELGWSAALGLDRMCEDLWRW 336
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 232 (86.7 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 97/344 (28%), Positives = 143/344 (41%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNF-NDYYDTSLKRGRASLLERAGVFVVEGDI 133
+LVTG AG++G+H L G VV +DN N YD R + + V + DI
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAV---ARIEFIVKQHVPFYDVDI 62
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
+ L K+F K S V+H AA V + K P++Y ++N++G VNLLE CK AN
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCK-ANDVKT 121
Query: 194 IIWASSSSVYGL------NKKIPFSEKDRTDQPSSLYAATKKAGEEIAHT-YNHIYGLSI 246
I+++SS++VYG N IP E D P++ Y TK E I YN +
Sbjct: 122 IVFSSSATVYGDVTRFGDNSMIPIPEHCPMD-PTNPYGRTKFIIESILKDIYNSDDAWKV 180
Query: 247 TGLRFFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYI 296
LR+F G P G P+ + + + + R+ + G ++ + RD T I
Sbjct: 181 AILRYFNPIGAHPSGLLGEDPLGIPNNLLPYLAQVAIGRREKLSIFGNDYNS--RDGTPI 238
Query: 297 DDIVKGCLAALDXXXXXXXXXXXXXXXXQL-RVFNLGNKSPEPVGKLVSXXXXXXXXXXX 355
D + + L L R +NLG V ++
Sbjct: 239 RDYIH--VVDLAKGHIAALAYLKNLQSKGLYREWNLGTGKGSTVFEVYHAFSKVVGRELP 296
Query: 356 XXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
A GDVL A A +EL +K + K +W
Sbjct: 297 HEVVGRRA-GDVLDLTAKPDRANKELQWKTELTIDDACKDLWKW 339
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 232 (86.7 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 97/344 (28%), Positives = 143/344 (41%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNF-NDYYDTSLKRGRASLLERAGVFVVEGDI 133
+LVTG AG++G+H L G VV +DN N YD R + + V + DI
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAV---ARIEFIVKQHVPFYDVDI 62
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
+ L K+F K S V+H AA V + K P++Y ++N++G VNLLE CK AN
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCK-ANDVKT 121
Query: 194 IIWASSSSVYGL------NKKIPFSEKDRTDQPSSLYAATKKAGEEIAHT-YNHIYGLSI 246
I+++SS++VYG N IP E D P++ Y TK E I YN +
Sbjct: 122 IVFSSSATVYGDVTRFGDNSMIPIPEHCPMD-PTNPYGRTKFIIESILKDIYNSDDAWKV 180
Query: 247 TGLRFFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYI 296
LR+F G P G P+ + + + + R+ + G ++ + RD T I
Sbjct: 181 AILRYFNPIGAHPSGLLGEDPLGIPNNLLPYLAQVAIGRREKLSIFGNDYNS--RDGTPI 238
Query: 297 DDIVKGCLAALDXXXXXXXXXXXXXXXXQL-RVFNLGNKSPEPVGKLVSXXXXXXXXXXX 355
D + + L L R +NLG V ++
Sbjct: 239 RDYIH--VVDLAKGHIAALAYLKNLQSKGLYREWNLGTGKGSTVFEVYHAFSKVVGRELP 296
Query: 356 XXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
A GDVL A A +EL +K + K +W
Sbjct: 297 HEVVGRRA-GDVLDLTAKPDRANKELQWKTELTIDDACKDLWKW 339
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 207 (77.9 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 62/227 (27%), Positives = 116/227 (51%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDY-YDTSLKRGRASLLERAGVFVVEGDI 133
+LVTG AGF+G++ + + + + NF+ Y +L + S+ + + V+G+I
Sbjct: 3 ILVTGGAGFIGSNFVHYMLQSYE-TYKIINFDALTYSGNLNNVK-SIQDHPNYYFVKGEI 60
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
+ LLE + +++ AA++ V +++NP+ + ++N+ G V LLE K P
Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIK 119
Query: 194 IIWASSSSVYG-LNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFF 252
++ S+ VYG L K F+E+ P+S Y+++K + + IA Y Y L + R
Sbjct: 120 LVQVSTDEVYGSLGKTGRFTEETPL-APNSPYSSSKASADMIALAYYKTYQLPVIVTRCS 178
Query: 253 TVYGPWGRPDMVYFFFTKNILKRKPVMIF-EGPNHATVARDFTYIDD 298
YGP+ P+ + N L+ K + ++ +G N RD+ ++ D
Sbjct: 179 NNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLN----VRDWLHVTD 221
Score = 50 (22.7 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWY 400
N + E ++P + GL++ V+WY
Sbjct: 283 NAEKMKNEFDWEPKYTFEQGLQETVQWY 310
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 221 (82.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 86/341 (25%), Positives = 145/341 (42%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+L+ G AG++G+H L G VV +DN L+ G + F GD+
Sbjct: 4 ILICGGAGYIGSHAVKKLVDEGLSVVVVDN--------LQTGHEDAITEGAKFY-NGDLR 54
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
D L +F VMH AA + V +M+ P+ Y N+N+ G + LLE
Sbjct: 55 DKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDK-F 113
Query: 195 IWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTV 254
I++S+++ YG +E+ T+ P++ Y TK A E++ H Y+ L R+F V
Sbjct: 114 IFSSTAATYGEVDVDLITEETMTN-PTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNV 172
Query: 255 YG--PWG------RPD--MVYFFFTKNILKRKPVMIFEGPNH----ATVARDFTYIDDIV 300
G P G RP+ ++ + +R+ +M+F G ++ T RD+ +++D+V
Sbjct: 173 AGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMF-GDDYNTPDGTCIRDYIHVEDLV 231
Query: 301 KGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXP 360
L +NLGN + V ++V P
Sbjct: 232 AAHFLGLKDLQNGGESDF----------YNLGNGNGFSVKEIVDAVREVTNHEIPAEVAP 281
Query: 361 MPANGDVLFTHANVSLARRELGYKPT-TNLQTGLKKFVRWY 400
A GD A+ A+ +LG+ P N++T ++ W+
Sbjct: 282 RRA-GDPARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWH 321
>RGD|621493 [details] [associations]
symbol:Gale "UDP-galactose-4-epimerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;ISO]
[GO:0006012 "galactose metabolic process" evidence=IEA;ISO]
[GO:0019388 "galactose catabolic process" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 HOVERGEN:HBG001396
OrthoDB:EOG4B5P5D EMBL:X53949 IPI:IPI00193573 PIR:S11223
UniGene:Rn.29908 ProteinModelPortal:P18645 SMR:P18645 STRING:P18645
PRIDE:P18645 InParanoid:P18645 ArrayExpress:P18645
Genevestigator:P18645 GermOnline:ENSRNOG00000009712 Uniprot:P18645
Length = 347
Score = 222 (83.2 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 91/345 (26%), Positives = 150/345 (43%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYY--DTSLKRGRASLLERAG--VFVVE 130
VLVTG AG++G+H L G V +DNF++ + S+ + E G V E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFEE 64
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
DI D L+ LF F V+H A V +++ P+ Y N+ G + LLE +
Sbjct: 65 MDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAMGV 124
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSL-YAATKKAGEEI------AHT-YNHI- 241
+ +++++SS++VYG K +P S + + + Y +K EE+ A T +N +
Sbjct: 125 K-SLVFSSSATVYG--KPVPASGRGPPHRGCTKPYGKSKFFIEEMIQDLCRADTAWNAVL 181
Query: 242 --YGLSITGLRFFTV-YGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATV----ARDFT 294
Y + I R + P G P+ + + ++ + R+ + G ++AT RD+
Sbjct: 182 LRYFIPIGAHRSARIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRDYI 241
Query: 295 YIDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXX 354
++ D+ KG +AAL R++NLG + V ++V
Sbjct: 242 HVVDLAKGHIAALKKLKEQCG----------CRIYNLGTGTGYSVLQMVQAMEKASGKKI 291
Query: 355 XXXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
GDV +AN SLA ELG+ L + RW
Sbjct: 292 PYKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 204 (76.9 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 67/232 (28%), Positives = 110/232 (47%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIND 135
LVTG AGF+G + RG VV LD Y +L ASL A V+GDI D
Sbjct: 5 LVTGRAGFIGGNFVLEAVSRGIRVVNLDALT--YAGNLNT-LASLEGNADHIFVKGDIGD 61
Query: 136 SLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKT---ANPQP 192
L+ +L + V++ AA++ V +++ P +++ +N+ G + LLEA + A P
Sbjct: 62 GALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDT 121
Query: 193 A-----IIWASSSSVYG-LNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSI 246
+ S+ VYG L + F+E P+S Y+A+K A + + ++H YGL +
Sbjct: 122 RRDAFRFLHVSTDEVYGTLGETGKFTETTPY-APNSPYSASKAASDHLVRAFHHTYGLPV 180
Query: 247 TGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDD 298
YGP+ P+ + L +P+ ++ G RD+ ++ D
Sbjct: 181 LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVY-GDGKQV--RDWLFVSD 229
Score = 56 (24.8 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWYL 401
+ S + ELG++P + G+ + V WYL
Sbjct: 300 DASKLKDELGWEPAYTFEQGIAQTVDWYL 328
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 205 (77.2 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 67/232 (28%), Positives = 110/232 (47%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIND 135
LVTG AGF+G + RG VV LD Y +L ASL A V+GDI D
Sbjct: 5 LVTGGAGFIGGNFVLEAVSRGIRVVNLDALT--YAGNLNT-LASLEGNADHIFVKGDIGD 61
Query: 136 SLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKT---ANPQP 192
L+ +L + V++ AA++ V +++ P +++ +N+ G + LLEA + A P
Sbjct: 62 GALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDT 121
Query: 193 A-----IIWASSSSVYG-LNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSI 246
+ S+ VYG L + F+E P+S Y+A+K A + + ++H YGL +
Sbjct: 122 RRDAFRFLHVSTDEVYGTLGETGKFTETTPY-APNSPYSASKAASDHLVRAFHHTYGLPV 180
Query: 247 TGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDD 298
YGP+ P+ + L +P+ ++ G RD+ ++ D
Sbjct: 181 LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVY-GDGKQV--RDWLFVSD 229
Score = 53 (23.7 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWYL 401
+ S + ELG++P + G+ V WYL
Sbjct: 300 DASKLKDELGWEPAYTFEQGIALTVDWYL 328
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 218 (81.8 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 70/240 (29%), Positives = 113/240 (47%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS-LKRGRASLLERAGVFVVE 130
G +LVTGA GF+G+H++ AL RG +N + L LL+ VF
Sbjct: 5 GKKILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLKSLDVFA-- 62
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
GDI D + + V+HLAA + Y+ +P +YV++N+ G +N+++A +
Sbjct: 63 GDIRDPHGVREAMKGCDV--VLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARELGV 120
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
++ S+S VYG + +P +E+ Q S Y+A+K ++IA ++ + + +R
Sbjct: 121 AK-VVHTSTSEVYGTARFVPITEEHPL-QGQSPYSASKIGADQIAMSFYSSFDTPVAIIR 178
Query: 251 FFTVYGPWGRPDMVYFFFT--KNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
F YGP R F T I + G H T RD Y+ D V G +A +
Sbjct: 179 PFNTYGP--RQSARAFIPTVITQIASGARTLRL-GALHPT--RDLNYVADTVAGFIAVAE 233
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 191 (72.3 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 67/244 (27%), Positives = 111/244 (45%)
Query: 75 VLVTGAAGFVGTH-VSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG-D 132
+L+TG AGF+G+ V + D VV +D Y + + ER F E D
Sbjct: 4 ILITGGAGFIGSALVRYIINETSDAVVVVDKLT-YAGNLMSLAPVAQSER---FAFEKVD 59
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACK------ 186
I D L ++F + VMHLAA++ V ++ P +++ +NI G LLEA +
Sbjct: 60 ICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNAL 119
Query: 187 TANPQPAIIW--ASSSSVYG-LNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYG 243
T + + A + S+ VYG L+ F + PSS Y+A+K + + + + YG
Sbjct: 120 TEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 244 LSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKG- 302
L YGP+ P+ + N L K + ++ + RD+ Y++D +
Sbjct: 180 LPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVY---GNGQQIRDWLYVEDHARAL 236
Query: 303 -CLA 305
C+A
Sbjct: 237 YCVA 240
Score = 69 (29.3 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWYL 401
+ S RELG+ P ++G++K V+WYL
Sbjct: 304 DASKIARELGWLPQETFESGMRKTVQWYL 332
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 218 (81.8 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 84/341 (24%), Positives = 142/341 (41%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERA-GVFVVEGDI 133
+LVTG AG++G+H L G V +DN ++ S++R + + + V + D+
Sbjct: 5 ILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQVDL 64
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
D LEK+F+ KF VMH A V ++ P+ Y N+N+ + LLE A+
Sbjct: 65 RDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVM-AAHGCKK 123
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNH-IYGLSITGLRFF 252
++++SS++VYG K++P +E+ S Y TK E+I I LR+F
Sbjct: 124 LVFSSSATVYGWPKEVPCTEESPLSGMSP-YGRTKLFIEDICRDVQRGDPEWRIIMLRYF 182
Query: 253 TVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATV----ARDFTYIDD 298
G P G P+ + + + ++ R P + G ++ T RD+ ++ D
Sbjct: 183 NPVGAHPSGRIGEDPCGTPNNLMPYVQQVVVGRLPNLKIYGTDYTTKDGTGVRDYIHVVD 242
Query: 299 IVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXX 358
+ G + AL V+NLG V ++V
Sbjct: 243 LADGHICALQKLDDTEIG---------CEVYNLGTGKGTTVLEMVDAFEKASGMKIPLVK 293
Query: 359 XPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
GD +A+ A REL +K ++ + W
Sbjct: 294 VGRRP-GDAETVYASTEKAERELNWKANFGIEEMCRDQWNW 333
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 217 (81.4 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 87/332 (26%), Positives = 144/332 (43%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
VLVTG G++G+H + + G V LDN + T L R + R V+GDI
Sbjct: 3 VLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRPQF--VQGDIR 60
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
D LL L V+H A V +++ P+ Y ++N+ G + L+ A + A + ++
Sbjct: 61 DKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK-SL 119
Query: 195 IWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIY-GLSITGLRFFT 253
+++SS++VYG +P +E T + ++ Y +K EE + SIT LR+F
Sbjct: 120 VFSSSATVYGEPTSVPITESFPT-KAANPYGRSKLMVEECLTDFQKANPDWSITLLRYFN 178
Query: 254 VYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATV----ARDFTYIDDI 299
G P G P+ + F T+ + R+ + G ++ T RD+ ++ D+
Sbjct: 179 PVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIHVMDL 238
Query: 300 VKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXX 359
G +AAL L ++NLG V +V
Sbjct: 239 ADGHIAALKKVGTCAG----------LHIYNLGTGKGYSVLDVVKAFETASGRTVPYKLV 288
Query: 360 PMPANGDVLFTHANVSLARRELGYKPTTNLQT 391
GD+ A+ + A ++LG+K T NL T
Sbjct: 289 DRRP-GDIAEYWADPTKAAQDLGWKATRNLHT 319
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 217 (81.4 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 87/332 (26%), Positives = 144/332 (43%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
VLVTG G++G+H + + G V LDN + T L R + R V+GDI
Sbjct: 3 VLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRPQF--VQGDIR 60
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
D LL L V+H A V +++ P+ Y ++N+ G + L+ A + A + ++
Sbjct: 61 DKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK-SL 119
Query: 195 IWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIY-GLSITGLRFFT 253
+++SS++VYG +P +E T + ++ Y +K EE + SIT LR+F
Sbjct: 120 VFSSSATVYGEPTSVPITESFPT-KAANPYGRSKLMVEECLTDFQKANPDWSITLLRYFN 178
Query: 254 VYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATV----ARDFTYIDDI 299
G P G P+ + F T+ + R+ + G ++ T RD+ ++ D+
Sbjct: 179 PVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIHVMDL 238
Query: 300 VKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXX 359
G +AAL L ++NLG V +V
Sbjct: 239 ADGHIAALKKVGTCAG----------LHIYNLGTGKGYSVLDVVKAFETASGRTVPYKLV 288
Query: 360 PMPANGDVLFTHANVSLARRELGYKPTTNLQT 391
GD+ A+ + A ++LG+K T NL T
Sbjct: 289 DRRP-GDIAEYWADPTKAAQDLGWKATRNLHT 319
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 203 (76.5 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 68/235 (28%), Positives = 104/235 (44%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDG--VVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
+LVTG AGF+ +HV +L ++ LD + Y SLK ++ + ++GD
Sbjct: 20 LLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLD--YCASLKN-LETISNKQNYKFIQGD 76
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
I +S ++ LF K V+H AAQ V + + N+ G L+ A A +
Sbjct: 77 ICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEK 136
Query: 193 AIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFF 252
I+ S+ VYG + F E QP++ YA++K A E +Y Y R
Sbjct: 137 -FIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPAVITRSS 194
Query: 253 TVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAAL 307
VYGP P+ V F ++L+ G T R+F Y D+V+ L L
Sbjct: 195 NVYGPHQYPEKVIPKFI-SLLQHNRKCCIHGSGLQT--RNFLYATDVVEAFLTVL 246
Score = 52 (23.4 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 381 LGYKPTTNLQTGLKKFVRWYLDYY 404
LG++P + G+KK + WY + +
Sbjct: 312 LGWRPKVPWKEGIKKTIDWYRENF 335
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 181 (68.8 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 63/234 (26%), Positives = 105/234 (44%)
Query: 75 VLVTGAAGFVGTHVSA-ALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+LVTG AGF+G+ V +R D VV +D Y +L+ + + + DI
Sbjct: 4 ILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLT--YAGNLE-SLTEVADNPRYAFEQVDI 60
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ-P 192
D L+++F + VMHLAA++ V ++ + ++ +NI G NLLEA + Q P
Sbjct: 61 CDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMP 120
Query: 193 A-------IIWASSSSVYG-LNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGL 244
+ S+ VYG L + PSS Y+A+K + + + + YGL
Sbjct: 121 SEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGL 180
Query: 245 SITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDD 298
YGP+ P+ + N L KP+ ++ RD+ +++D
Sbjct: 181 PTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVY---GDGMQIRDWLFVED 231
Score = 79 (32.9 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 366 DVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLD 402
DV + + + RR+LG+ P ++GL+K V+WYLD
Sbjct: 298 DVRYA-VDAAKIRRDLGWLPLETFESGLRKTVQWYLD 333
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 206 (77.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 69/229 (30%), Positives = 117/229 (51%)
Query: 75 VLVTGAAGFVGTH-VSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+LVTG AGF+GT+ V +A+R D V + + Y +R + +E A + +V+GDI
Sbjct: 3 LLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAG---RRESLADVEDA-IRLVQGDI 58
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
D+ L+ +L + + V+H AA++ V A+ NP ++++N+ G +LEA + +
Sbjct: 59 TDAELVSQL--VAESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVRLH 116
Query: 194 IIWASSSSVYG---LNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
I S+ VYG L+ + F+E + PSS Y+ATK + + + YG+ T
Sbjct: 117 HI--STDEVYGDLELDDRARFTESTPYN-PSSPYSATKAGADMLVRAWVRSYGVRATISN 173
Query: 251 FFTVYGPWGRPDMVYFFFTKNILK-RKPVMIFEGPNHATVARDFTYIDD 298
YGP+ + N+L R+P + G N RD+ ++DD
Sbjct: 174 CSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGAGAN----VRDWIHVDD 218
Score = 43 (20.2 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 380 ELGYKPT-TNLQTGLKKFVRWYLD 402
EL + P T+ + GL+ + WY D
Sbjct: 287 ELCWAPKHTDFEEGLRTTIDWYRD 310
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 214 (80.4 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 93/339 (27%), Positives = 142/339 (41%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
VLVTG AG++G+HV L G VV DN + + +L G ER +V GD++
Sbjct: 3 VLVTGGAGYIGSHVVRQLSEAGYTVVVYDNLSTGFPDALVHG-----ER----LVTGDLS 53
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
D+ L+ LF FS V+H AA ++ P+ Y +N +NLL AC +
Sbjct: 54 DTARLDALFVEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHGVE-RF 112
Query: 195 IWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTV 254
I++S+++VYG+ +E+ T P + Y +K E + +G+ LR+F V
Sbjct: 113 IFSSTAAVYGIPDSGVAAEESAT-VPINPYGTSKLMSEWMLRDVCAAHGMRSVALRYFNV 171
Query: 255 YG--PWGR-----PDMVYFFFTK---NILKRKPVMIF--EGPN-HATVARDFTYIDDIVK 301
G P R P+ + + R V IF + P T RD+ +++D+
Sbjct: 172 AGADPQARMGQRTPEATHLIKVSCQAALGLRDKVCIFGTDYPTPDGTGIRDYIHVEDLAS 231
Query: 302 GCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPM 361
LAAL R+ N+G S V +++ P
Sbjct: 232 AHLAALSYLEKGGEST---------RI-NVGYGSGSSVREVIDMVRRVSGVHFLAEEAPR 281
Query: 362 PANGDVLFTHANVSLARRELGYKPT-TNLQTGLKKFVRW 399
GD A AR LG+ P NL+T + RW
Sbjct: 282 RP-GDPPSLVARADRARTLLGWTPRYDNLETIVADAWRW 319
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 175 (66.7 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 64/234 (27%), Positives = 108/234 (46%)
Query: 75 VLVTGAAGFVGTHVSA-ALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+LVTG AGF+G+ V ++ D VV LD Y +L+ + + + DI
Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLT--YAGNLE-SLTDIADNPRYAFEQVDI 65
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKT------ 187
D L+++F + VMHLAA++ V A+ + ++ +NI G +LLEA +
Sbjct: 66 CDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMP 125
Query: 188 ANPQPAIIW--ASSSSVYG-LNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGL 244
+ + A + S+ VYG L+ + PSS Y+A+K A + + + Y L
Sbjct: 126 SEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAAADHLVRAWQRTYRL 185
Query: 245 SITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDD 298
YGP P+ + N L KP+ ++ G A + RD+ +++D
Sbjct: 186 PSIVSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVY-GDG-AQI-RDWLFVED 236
Score = 78 (32.5 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 378 RRELGYKPTTNLQTGLKKFVRWYLD 402
RR+LG+ P ++GL+K V+WYLD
Sbjct: 314 RRDLGWLPLETFESGLRKTVQWYLD 338
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 207 (77.9 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 83/340 (24%), Positives = 143/340 (42%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+LVTG AG++GTH L G V+ LDN ++ +L R + V +GDI
Sbjct: 3 ILVTGGAGYIGTHTVVELLNAGSEVIVLDNLSNSSIEALDR--VERITGKSVTFYQGDIL 60
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+ LL+K+F+ V+H A V ++ P+ Y +N+ G + L + + +
Sbjct: 61 NKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKN-L 119
Query: 195 IWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIY-GLSITGLRFFT 253
+++SS++VYG +P +E D ++ Y +K E I +H +I LR+F
Sbjct: 120 VFSSSATVYGDPASLPITE-DFPTGATNPYGQSKLMVEHILADLHHSDPSWNIARLRYFN 178
Query: 254 VYG----------PWGRPDMVYFFFTKNIL-KRKPVMIF--EGPNH-ATVARDFTYIDDI 299
G P P+ + F + + KR+ + +F + P H T RD+ ++ D+
Sbjct: 179 PVGAHASGLIGEDPNDIPNNLMPFIAQVAVGKREALSVFGNDYPTHDGTGVRDYIHVVDL 238
Query: 300 VKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXX 359
G L AL+ L +NLG V +V
Sbjct: 239 AIGHLKALEKLATKPG----------LVTYNLGTGQGYSVLDMVKAFEKACGKSIAYLIA 288
Query: 360 PMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
P GD+ +A+ A+ +L ++ T +L+ W
Sbjct: 289 PRRP-GDIAACYADPDHAKTDLDWQATHSLEDMANSSWHW 327
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 127 (49.8 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 35/113 (30%), Positives = 59/113 (52%)
Query: 75 VLVTGAAGFVGTHVSA-ALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+LVTG AGF+G+ V + D VV +D Y +L+ A + + DI
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT--YAGNLE-SLADVSDSERYAFEHADI 59
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACK 186
D++ + ++F + VMHLAA++ V ++ P +++ +NI G LLEA +
Sbjct: 60 CDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
Score = 91 (37.1 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 206 NKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMVY 265
N+ +P + PSS Y+A+K + + + + YGL YGP+ P+ +
Sbjct: 149 NEALPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLI 208
Query: 266 FFFTKNILKRKPVMIFEGPNHATVARDFTYIDD 298
N L+ K + I+ G RD+ Y++D
Sbjct: 209 PLVILNALEGKALPIY-GKGDQI--RDWLYVED 238
Score = 74 (31.1 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 379 RELGYKPTTNLQTGLKKFVRWYL 401
RELG+KP ++G++K V WYL
Sbjct: 313 RELGWKPQETFESGIRKTVEWYL 335
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 125 (49.1 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 34/113 (30%), Positives = 58/113 (51%)
Query: 75 VLVTGAAGFVGTHVSA-ALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+L+TG AGF+G+ V ++ D VV +D Y +L+ + + E DI
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLT--YAGNLE-SLSDISESNRYNFEHADI 59
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACK 186
DS + ++F + VMHLAA++ V ++ P +++ +NI G LLE +
Sbjct: 60 CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVAR 112
Score = 93 (37.8 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 24/90 (26%), Positives = 41/90 (45%)
Query: 209 IPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMVYFFF 268
+P + PSS Y+A+K + + + + YGL YGP+ P+ +
Sbjct: 152 LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLV 211
Query: 269 TKNILKRKPVMIFEGPNHATVARDFTYIDD 298
N L+ KP+ I+ G RD+ Y++D
Sbjct: 212 ILNALEGKPLPIY-GKGDQI--RDWLYVED 238
Score = 74 (31.1 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 379 RELGYKPTTNLQTGLKKFVRWYL 401
RELG+KP ++G++K V WYL
Sbjct: 313 RELGWKPLETFESGIRKTVEWYL 335
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 213 (80.0 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 86/346 (24%), Positives = 143/346 (41%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNF-NDYYDTSLKRGRASLLERAGVFVVEGDI 133
+LVTG AG++G+H L G V+ +DN N YD R + R + + D+
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAV---ARVEFIVRKSIKFFKLDL 64
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
D L ++F+ K V+H AA V +MK P+ Y ++NI G + LL + +
Sbjct: 65 RDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVK-T 123
Query: 194 IIWASSSSVYG----LNKKIPFSEKDRTDQPSSLYAATKKAGEEIA---HTYNHIYGLSI 246
++++SS++VYG + IP E D P++ Y TK A E I HT ++ + +I
Sbjct: 124 VVFSSSATVYGDATRFDNMIPIPESCPND-PTNPYGKTKYAIENIIKDLHTSDNTWRGAI 182
Query: 247 TGLRFFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYI 296
LR+F G P G P+ + F + + R+ ++ G ++ + D T I
Sbjct: 183 --LRYFNPIGAHPSGLLGEDPLGIPNNLLPFLAQVAIGRREKLLVFGDDYDS--HDGTPI 238
Query: 297 DDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXX 356
D + A R +NLG V +
Sbjct: 239 RDYIHVVDLAKGHIAALNYLNKINNSEGMYREWNLGTGKGSSVFDIYHAFCKEVGKDLPY 298
Query: 357 XXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLD 402
GDVL A+ + A EL +K ++ + +W ++
Sbjct: 299 EVVGR-RTGDVLNLTASPNRANSELKWKAELSITDACRDLWKWTIE 343
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 212 (79.7 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 71/232 (30%), Positives = 105/232 (45%)
Query: 75 VLVTGAAGFVGTHVSAAL-RRRGD-GVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
+L+TGAAGF+ +HV+ L R D +V LD + Y ++LK S FV +GD
Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLD--YCSNLKNLNPSKHSPNFKFV-KGD 65
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
I + L+ L +MH AAQ V + N + +NI G LLEACK
Sbjct: 66 IASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
Query: 193 AIIWASSSSVYGLNKKIPFSEKDRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
I S+ VYG + Q P++ Y+ATK E + Y YGL + R
Sbjct: 126 RFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
Query: 251 FFTVYGPWGRPDMVYFFFTKNILKRKPVMIF-EGPNHATVARDFTYIDDIVK 301
VYGP P+ + F ++ + + I +G N R + Y +D+ +
Sbjct: 186 GNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSN----VRSYLYCEDVAE 233
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 178 (67.7 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 64/244 (26%), Positives = 107/244 (43%)
Query: 75 VLVTGAAGFVGTH-VSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG-D 132
+LVTG +GF+G+ + + D V+ +D + S R +E +V E D
Sbjct: 4 ILVTGGSGFIGSALIRYIINHTQDFVINIDKLTYAANQSALRE----VENNPRYVFEKVD 59
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACK----TA 188
I D ++E +F + VMHLAA++ V ++ +V +NI G LLE K T
Sbjct: 60 ICDLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHTL 119
Query: 189 NPQPAIIWA----SSSSVYG-LNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYG 243
+ + S+ VYG L+ P + PSS Y+A+K A + ++ YG
Sbjct: 120 DEAKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRTYG 179
Query: 244 LSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGC 303
L + YG + + + N + KP+ I+ G RD+ +++D V+
Sbjct: 180 LPVIITNSSNNYGAYQHAEKLIPLMISNAVMGKPLPIY-GDGQQI--RDWLFVEDHVQAS 236
Query: 304 LAAL 307
L
Sbjct: 237 YLVL 240
Score = 66 (28.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 366 DVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDYYSDS 407
DV ++ + S ELG++P + GL++ V+WYL S S
Sbjct: 298 DVRYS-LDCSKIHAELGWQPQITFEQGLRQTVKWYLFNSSSS 338
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 203 (76.5 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 70/229 (30%), Positives = 112/229 (48%)
Query: 75 VLVTGAAGFVGTH-VSAALRR-RGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
+LVTG AGF+G + V ALR R + LD Y S + A + +R + +V+GD
Sbjct: 3 LLVTGGAGFIGANFVHLALREARTSSITVLDALT--YAGS-RESLAPVADR--IRLVQGD 57
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
I D+ L+ L + + V+H AA+ V A+ +P +++SN+ G +LEA + N +
Sbjct: 58 ITDAALVGDL--VAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNVR- 114
Query: 193 AIIWASSSSVYG-LNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
+ S+ VYG L P + T PSS Y++TK A + + + YG+ T
Sbjct: 115 -LHHVSTDEVYGDLELDNPARFNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISN 173
Query: 251 FFTVYGPWGRPDMVYFFFTKNILK-RKPVMIFEGPNHATVARDFTYIDD 298
YGP+ + N+L R+P + G N RD+ ++DD
Sbjct: 174 CSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGAGAN----VRDWIHVDD 218
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 202 (76.2 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 73/244 (29%), Positives = 123/244 (50%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFND---YYDTSLKR-GR-ASLLERAGVFVV 129
V +TG AGF+G+ ++ L+ + + ++ +D + + +L+ G +LLE G
Sbjct: 3 VAITGGAGFIGSQLALNLQEKHEILI-IDKMRSSATFENGNLQSFGHFKNLLEFDGELFA 61
Query: 130 EGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTAN 189
GDIND +L+K+ + K + H AA + + + + +N+ F + +E N
Sbjct: 62 -GDINDEKVLKKIEDF-KPEIIFHQAAISDT--TVFDQTKVLQTNLNTFKDFIELSIDLN 117
Query: 190 PQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLS-ITG 248
+ +I+ASS+SVYG K KD ++P + YA +K +++A Y Y + + G
Sbjct: 118 AK--LIYASSASVYGDAKSPQTVGKD--EEPKNPYAFSKLMMDKLAKKY---YDKAHLVG 170
Query: 249 LRFFTVYGPW----GRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCL 304
LR+F VYG + + F IL K +FEG + + RDFTYI D++ L
Sbjct: 171 LRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQ--IYRDFTYIKDVINANL 228
Query: 305 AALD 308
ALD
Sbjct: 229 IALD 232
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 203 (76.5 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 85/340 (25%), Positives = 136/340 (40%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRA--SLLERAG--VFVVE 130
VLVTG AG++G+H + G V+ +DN + Y + K A + E G V
Sbjct: 6 VLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFYR 65
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
DI D + +F K V H AA V + + P+ Y ++N+ G LLEA N
Sbjct: 66 VDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNNV 125
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTY-NHIYGLSITGL 249
+++SS++VYG K +P +E+ T +S Y TK EEI ++ L
Sbjct: 126 FK-FVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVSL 184
Query: 250 RFFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDI 299
R+F G P G P+ + + + + R+P + G + T D T + D
Sbjct: 185 RYFNPVGAHISGRIGEDPNGEPNNLMPYIAQVAVGRRPSLSVYGSDFPT--HDGTGVRDY 242
Query: 300 VKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXX 359
+ + L +NLG V +V
Sbjct: 243 IH--IVDLAEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNYTLV 300
Query: 360 PMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
+GDV +A+ +LA ++LG+K + + RW
Sbjct: 301 DR-RSGDVATCYADATLADKKLGWKAERGIDKMCEDTWRW 339
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 205 (77.2 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 70/252 (27%), Positives = 110/252 (43%)
Query: 63 SSRPRSRAGGHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLE 122
S R R+ +L+TG AGFVG+H+ L G V+ LDN Y T K+ +
Sbjct: 127 SVRYRNEETRKRILITGGAGFVGSHLVDKLMLDGHEVIALDN----YFTGRKKNVEHWIG 182
Query: 123 RAGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLL 182
+V D+ + F V+ + HLA+ A + M NP+ + +N G +N+L
Sbjct: 183 HPNFEMVHHDV-----VNPYF--VEVDQIYHLASPASPPHYMYNPVKTIKTNTLGTINML 235
Query: 183 EACKTANPQPAIIWASSSSVYGLNKKIPFSEKD----RTDQPSSLYAATKKAGEEIAHTY 238
K + ++ AS+S VYG + P E T P + Y K+ E + Y
Sbjct: 236 GLAKRV--KATVLLASTSEVYGDPEVHPQPETYWGHVNTIGPRACYDEGKRVAESLMVAY 293
Query: 239 NHIYGLSITGLRFFTVYGPWGRPD--MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYI 296
N + I R F +GP + V F L+ KP+ I+ + T R F Y+
Sbjct: 294 NKQENIKIRIARIFNTFGPRMHMNDGRVVSNFIIQALQDKPITIY---GNGTQTRSFQYV 350
Query: 297 DDIVKGCLAALD 308
D+V G + ++
Sbjct: 351 TDLVDGLIKLMN 362
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 184 (69.8 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 53/164 (32%), Positives = 83/164 (50%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYY--DTSLKRGRASLLERAG--VFVVE 130
VLVTG AG++G+H L G V +DNF++ + SL + E G V E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
DI D L++LF F V+H A V +++ P+ Y N+ G + LLE K A+
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHG 123
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEI 234
++++SS++VYG + +P E T ++ Y +K EE+
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM 167
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 184 (69.8 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 53/164 (32%), Positives = 83/164 (50%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYY--DTSLKRGRASLLERAG--VFVVE 130
VLVTG AG++G+H L G V +DNF++ + SL + E G V E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
DI D L++LF F V+H A V +++ P+ Y N+ G + LLE K A+
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHG 123
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEI 234
++++SS++VYG + +P E T ++ Y +K EE+
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM 167
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 198 (74.8 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 70/233 (30%), Positives = 115/233 (49%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIND 135
L+TG AGFVG +++ L + V G N+ A L V ++ DI D
Sbjct: 4 LITGVAGFVGKYLANHLTEQNVEVFGTSRNNE----------AKL---PNVEMISLDIMD 50
Query: 136 SLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAII 195
S ++K+ + +K ++ HLAA++ V+ + N ++N+ G +++L+A + +N I+
Sbjct: 51 SQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRIL 110
Query: 196 WASSSSVYG--LNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
SS YG L ++ P SE+++ +P S Y +K + +A Y YG+ I R F
Sbjct: 111 TIGSSEEYGMILPEESPVSEENQL-RPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFN 169
Query: 254 VYGPWGRPDMVYFFFTKNIL-----KRKPVMIFEGPNHATVARDFTYIDDIVK 301
GP V F K I+ K++P+ I G A RDFT + DIV+
Sbjct: 170 HIGPGQSLGFVTQDFAKQIVDIEMEKQEPI-IKVGNLEAV--RDFTDVRDIVQ 219
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 197 (74.4 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 69/240 (28%), Positives = 109/240 (45%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+LVTG AGF+G+H+ L +G V+ LDNF T KR L++ V+ DI
Sbjct: 3 ILVTGGAGFIGSHLCERLLEQGHDVLCLDNFF----TGSKRNIDRLMDFHRFEVIRHDII 58
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+ +LLE + +LA A + NP+ + +++ G +N+L K + I
Sbjct: 59 EPILLE-------VDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRAR--I 109
Query: 195 IWASSSSVYGLNKKIPFSEKDRTD-QP---SSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
+ AS+S VYG P E + P S Y K+ E + Y+ G+ I R
Sbjct: 110 LQASTSEVYGDPTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIAR 169
Query: 251 FFTVYGP-WGRPD-MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
F YGP D V F L+ + + ++ G T R F Y+DD++ G + ++
Sbjct: 170 IFNTYGPRMAEHDGRVVSNFVVQALRGEDLTVY-GDGSQT--RSFCYVDDLLDGLVTLME 226
Score = 139 (54.0 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 59/262 (22%), Positives = 105/262 (40%)
Query: 145 LVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWASSSSVYG 204
L++ + +LA A + NP+ + +++ G +N+L K + I+ AS+S VYG
Sbjct: 62 LLEVDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRAR--ILQASTSEVYG 119
Query: 205 LNKKIPFSEKDRTD-QP---SSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGR 260
P E + P S Y K+ E + Y+ G+ I R F YGP
Sbjct: 120 DPTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGP-RM 178
Query: 261 PDMVYFFFTKNILK--RKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXXXXXXXX 318
+ + +++ R + G T R F Y+DD++ G + ++
Sbjct: 179 AEHDGRVVSNFVVQALRGEDLTVYGDGSQT--RSFCYVDDLLDGLVTLMEHDQFCGPV-- 234
Query: 319 XXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFTHANVSLAR 378
NLGN P+ + P+P++ D +++LAR
Sbjct: 235 -----------NLGNPEETPIIEFARRIIAMTGSSSQIIYRPLPSD-DPRQRQPDITLAR 282
Query: 379 RELGYKPTTNLQTGLKKFVRWY 400
LG++P +L GL K + ++
Sbjct: 283 TILGWEPRVSLDEGLAKTIEYF 304
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 153 (58.9 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 50/167 (29%), Positives = 83/167 (49%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLL--ERAGVFVVEGD 132
VL+TG G++G+ S AL VV +DN Y +++ R L+ +R V D
Sbjct: 6 VLITGGTGYIGSFTSLALLENDYDVVIVDNL--YNSSAVAIDRIELICGKRPAFHNV--D 61
Query: 133 INDSLLLEKLFNL-VKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
I D L+K+F+ + V+H AA V + + P+ Y N+ G ++LL + + N
Sbjct: 62 ITDEAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQKHNVC 121
Query: 192 PAIIWASSSSVYG----LNKKIPFSEKDRTDQPSSLYAATKKAGEEI 234
I+++SS++VYG + IP E P++ Y TK E++
Sbjct: 122 N-IVFSSSATVYGDATRVPNMIPIPEHCPIG-PTNTYGRTKSTIEDV 166
Score = 89 (36.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 31/130 (23%), Positives = 58/130 (44%)
Query: 274 KRKPVMIFEGPNHA----TVARDFTYIDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVF 329
+R+ +++F G +++ T RD+ ++ D+ KG LAAL+ ++ +
Sbjct: 229 QREKLLVF-GDDYSSRDGTAIRDYIHVLDLAKGHLAALNYLRDNKPG---------VKAW 278
Query: 330 NLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFTHANVSLARRELGYKPTTNL 389
NLG+ V +++ P GDVL AN +LA +ELG+K +
Sbjct: 279 NLGSGRGSTVFEMIKAFSSVVGRDLPYEVVPR-RQGDVLDLTANPALANKELGWKTELRM 337
Query: 390 QTGLKKFVRW 399
+ + +W
Sbjct: 338 EDACQDLWKW 347
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 197 (74.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 89/344 (25%), Positives = 143/344 (41%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
VLVTG AG++G+H L +G VV +DN + ++ R L V + D+
Sbjct: 9 VLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAVHR--IEKLTGKKVIFHQVDLL 66
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
D L+K+F S V+H A V +++ P+SY +NI+G +NL+E K N +
Sbjct: 67 DEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVRD-F 125
Query: 195 IWASSSSVYGLNKK----IPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIY-GLSITGL 249
+++SS++VYG + IP E + S Y TK E I + L+ L
Sbjct: 126 VFSSSATVYGDPTRPGGTIPIPESCPREGTSP-YGRTKLFIENIIEDETKVNKSLNAALL 184
Query: 250 RFFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDI 299
R+F G P G P+ + + + + R + G ++ T D T I D
Sbjct: 185 RYFNPGGAHPSGELGEDPLGIPNNLLPYIAQVAVGRLDHLNVFGDDYPT--SDGTPIRDY 242
Query: 300 VKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXX 359
+ C A R +NLG+ + V ++++
Sbjct: 243 IHVCDLA---EAHVAALDYLRQHFVSCRPWNLGSGTGSTVFQVLNAFSKAVGRDLPYKVT 299
Query: 360 PMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDY 403
P A GDV+ AN + A EL +K + ++ RW Y
Sbjct: 300 PRRA-GDVVNLTANPTRANEELKWKTSRSIYEICVDTWRWQQKY 342
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 199 (75.1 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 55/188 (29%), Positives = 96/188 (51%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
VLVTG AG++G+H + L R V +DN + ++K + + + + D+
Sbjct: 97 VLVTGGAGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLG 156
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
D L +EK+F+ F VMH AA A V + P+ Y ++ + + +LEA + +
Sbjct: 157 DPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAM-ARHKVKKL 215
Query: 195 IWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTV 254
I++S+ + YG +K+P +E D P + Y KK E++ ++ +++ LR+F V
Sbjct: 216 IYSSTCATYGEPEKMPITE-DTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILRYFNV 274
Query: 255 YG--PWGR 260
G P GR
Sbjct: 275 IGSDPGGR 282
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 202 (76.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 92/350 (26%), Positives = 141/350 (40%)
Query: 67 RSRAGGHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNF-NDYYDTSLKRGRASLLERAG 125
+S + IVLVTG AG++G+H L G V DN N YD+ R +L +
Sbjct: 6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSV---ARLEVLTKHH 62
Query: 126 VFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEAC 185
+ E D+ D LEK+F K V+H A V + + P+ Y ++NI G V LLE
Sbjct: 63 IPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELM 122
Query: 186 KTANPQPAIIWASSSSVYG----LNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHT-YNH 240
+ N +++SS++VYG IP E+ P++ Y TK A E I + YN
Sbjct: 123 QQYNVSK-FVFSSSATVYGDATRFPNMIPIPEECPLG-PTNPYGHTKYAIENILNDLYNS 180
Query: 241 IY-GLSITGLRFFTVYG----------PWGRPDMVYFFFTKNILKRKPVMIFEGPNHATV 289
LR+F G P G P+ + + + + R+ + G ++ +
Sbjct: 181 DKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDS- 239
Query: 290 ARDFTYIDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXX 349
RD T I D + A R +NLG+ V ++
Sbjct: 240 -RDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKA 298
Query: 350 XXXXXXXXXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
A GDVL A A+REL ++ ++ K +W
Sbjct: 299 SGIDLPYKVTGRRA-GDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKW 347
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 198 (74.8 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 65/240 (27%), Positives = 111/240 (46%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+L+TG AGFVG+H++ L G V +DNF T KR + ++ D+
Sbjct: 92 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 146
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+E L+ ++ + HLA+ A M NP+ + +N G +N+L K + +
Sbjct: 147 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 198
Query: 195 IWASSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
+ AS+S VYG + P +E + P + Y K+ E + + Y G+ + R
Sbjct: 199 LLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 258
Query: 251 FFTVYGPWGRPD--MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
F +GP + V F L+ +P+ ++ GP T R F Y+ D+V G +A ++
Sbjct: 259 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY-GPG--TQTRAFQYVSDLVNGLVALMN 315
Score = 123 (48.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 61/278 (21%), Positives = 108/278 (38%)
Query: 138 LLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWA 197
++E L+ ++ + HLA+ A M NP+ + +N G +N+L K + ++ A
Sbjct: 146 VVEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLA 201
Query: 198 SSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
S+S VYG + P +E + P + Y K+ E + + Y G+ + R F
Sbjct: 202 STSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 261
Query: 254 VYGPWGRPDMVYFFFTKN-ILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXX 312
+GP R M N IL+ T R F Y+ D+V G +A ++
Sbjct: 262 TFGP--RMHMNDGRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGLVALMNSNVS 319
Query: 313 XXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFTHA 372
NLGN + + A D
Sbjct: 320 SPV--------------NLGNPEEHTILEFAQLIKKLVGSGSEIQFLS-EAQDDPQKRKP 364
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWY---LDYYSDS 407
++ A+ LG++P L+ GL K + ++ L+Y +++
Sbjct: 365 DIRKAKLLLGWEPVVPLEEGLNKAIHYFRKELEYQANN 402
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 124 (48.7 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 38/114 (33%), Positives = 58/114 (50%)
Query: 75 VLVTGAAGFVGTHVSA-ALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVE-GD 132
+LVTG AGF+G+ V + D VV +D Y S ER +V E D
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT-YAGNRESLADVSDSER---YVFEHAD 58
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACK 186
I D+ + ++F + VMHLAA++ V ++ P +++ +NI G LLEA +
Sbjct: 59 ICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
Score = 87 (35.7 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 23/92 (25%), Positives = 42/92 (45%)
Query: 207 KKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMVYF 266
+++P + PSS Y+A+K + + + + YGL YGP+ P+ +
Sbjct: 150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIP 209
Query: 267 FFTKNILKRKPVMIFEGPNHATVARDFTYIDD 298
N L+ K + I+ G RD+ Y++D
Sbjct: 210 LVILNALEGKALPIY-GKGDQI--RDWLYVED 238
Score = 68 (29.0 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 379 RELGYKPTTNLQTGLKKFVRWYL 401
R LG+KP ++G++K V WYL
Sbjct: 313 RALGWKPQETFESGIRKTVEWYL 335
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 164 (62.8 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 75/249 (30%), Positives = 114/249 (45%)
Query: 75 VLVTGAAGFVGTH-VSAALRRRGD-GVVGLDNFNDYYDTSLKRGRASLLERAG--VFVVE 130
++VTG AGF+G++ V D V LD Y + RA+L E G V +V
Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLT--YAGN----RANLEEILGDRVELVV 60
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
GDI DS L++KL K ++H AA++ ++K+P ++ +N G LLEA + +
Sbjct: 61 GDIADSELVDKL--AAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDI 118
Query: 191 QPAIIWASSSSVYG---LNKKIPF-----SEKDRTD---QPSSLYAATKKAGEEIAHTYN 239
+ S+ VYG L + +P EK + PSS Y++TK A + I +
Sbjct: 119 R--FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWV 176
Query: 240 HIYGLSITGLRFFTVYGPWGRPDMVYFFFTKNILKR-KPVMIFEGPNHATVARDFTYIDD 298
+G+ T YGP+ + NIL KP + EG N RD+ + +D
Sbjct: 177 RSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKN----VRDWIHTND 232
Query: 299 IVKGCLAAL 307
G A L
Sbjct: 233 HSTGVWAIL 241
Score = 71 (30.1 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 363 ANGDVLFTHANVSLARRELGYKPT-TNLQTGLKKFVRWYLDY 403
A D+ + + L R ELG+KP TN + GL+ ++WY ++
Sbjct: 285 AGHDLRYAIDSTKL-REELGWKPQFTNFEEGLEDTIKWYTEH 325
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 192 (72.6 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 67/241 (27%), Positives = 107/241 (44%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
V+VTG AGFVG+H+ L RGD V+ +DNF T K ++ D+
Sbjct: 121 VVVTGGAGFVGSHLVDRLMARGDTVIVVDNFF----TGRKENVMHHFSNPNFEMIRHDVV 176
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAG-VRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
+ +LLE + HLA A V Y NP+ + +N+ G +N+L K +
Sbjct: 177 EPILLE-------VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR-- 226
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTD-QP---SSLYAATKKAGEEIAHTYNHIYGLSITGL 249
+ S+S VYG + P E + P S Y K+ E + Y+ + +
Sbjct: 227 FLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIA 286
Query: 250 RFFTVYGPWGRPD--MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAAL 307
R F YGP D V F L+++P+ ++ G T R F ++ D+V+G + +
Sbjct: 287 RIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY-GDGKQT--RSFQFVSDLVEGLMRLM 343
Query: 308 D 308
+
Sbjct: 344 E 344
Score = 43 (20.2 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVR 398
+++ A+ LG++P +L+ GL V+
Sbjct: 394 DITKAKELLGWEPKVSLRQGLPLMVK 419
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 193 (73.0 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 65/240 (27%), Positives = 110/240 (45%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+L+TG AGFVG+H++ L G V +DNF T KR + ++ D+
Sbjct: 34 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 88
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+E L+ ++ + HLA+ A M NP+ + +N G +N+L K + +
Sbjct: 89 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 140
Query: 195 IWASSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
+ AS+S VYG + P SE + P + Y K+ E + + Y G+ + R
Sbjct: 141 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 200
Query: 251 FFTVYGPWGRPD--MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
F +GP + V F L+ +P+ ++ G T R F Y+ D+V G +A ++
Sbjct: 201 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY-GSGSQT--RAFQYVSDLVNGLVALMN 257
Score = 125 (49.1 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 61/278 (21%), Positives = 108/278 (38%)
Query: 138 LLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWA 197
++E L+ ++ + HLA+ A M NP+ + +N G +N+L K + ++ A
Sbjct: 88 VVEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLA 143
Query: 198 SSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
S+S VYG + P SE + P + Y K+ E + + Y G+ + R F
Sbjct: 144 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 203
Query: 254 VYGPWGRPDMVYFFFTKN-ILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXX 312
+GP R M N IL+ + R F Y+ D+V G +A ++
Sbjct: 204 TFGP--RMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS 261
Query: 313 XXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFTHA 372
NLGN + + A D
Sbjct: 262 SPV--------------NLGNPEEHTILEFAQLIKNLVGSGSEIQFLS-EAQDDPQKRKP 306
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWY---LDYYSDS 407
++ A+ LG++P L+ GL K + ++ L+Y +++
Sbjct: 307 DIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANN 344
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 193 (73.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 65/240 (27%), Positives = 110/240 (45%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+L+TG AGFVG+H++ L G V +DNF T KR + ++ D+
Sbjct: 85 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 139
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+E L+ ++ + HLA+ A M NP+ + +N G +N+L K + +
Sbjct: 140 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 191
Query: 195 IWASSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
+ AS+S VYG + P SE + P + Y K+ E + + Y G+ + R
Sbjct: 192 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 251
Query: 251 FFTVYGPWGRPD--MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
F +GP + V F L+ +P+ ++ G T R F Y+ D+V G +A ++
Sbjct: 252 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY-GSGSQT--RAFQYVSDLVNGLVALMN 308
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 193 (73.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 65/240 (27%), Positives = 110/240 (45%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+L+TG AGFVG+H++ L G V +DNF T KR + ++ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 145
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+E L+ ++ + HLA+ A M NP+ + +N G +N+L K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 195 IWASSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
+ AS+S VYG + P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 251 FFTVYGPWGRPD--MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
F +GP + V F L+ +P+ ++ G T R F Y+ D+V G +A ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY-GSGSQT--RAFQYVSDLVNGLVALMN 314
Score = 125 (49.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 61/278 (21%), Positives = 108/278 (38%)
Query: 138 LLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWA 197
++E L+ ++ + HLA+ A M NP+ + +N G +N+L K + ++ A
Sbjct: 145 VVEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLA 200
Query: 198 SSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
S+S VYG + P SE + P + Y K+ E + + Y G+ + R F
Sbjct: 201 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 260
Query: 254 VYGPWGRPDMVYFFFTKN-ILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXX 312
+GP R M N IL+ + R F Y+ D+V G +A ++
Sbjct: 261 TFGP--RMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS 318
Query: 313 XXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFTHA 372
NLGN + + A D
Sbjct: 319 SPV--------------NLGNPEEHTILEFAQLIKNLVGSGSEIQFLS-EAQDDPQKRKP 363
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWY---LDYYSDS 407
++ A+ LG++P L+ GL K + ++ L+Y +++
Sbjct: 364 DIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANN 401
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 193 (73.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 65/240 (27%), Positives = 110/240 (45%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+L+TG AGFVG+H++ L G V +DNF T KR + ++ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 145
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+E L+ ++ + HLA+ A M NP+ + +N G +N+L K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 195 IWASSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
+ AS+S VYG + P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 251 FFTVYGPWGRPD--MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
F +GP + V F L+ +P+ ++ G T R F Y+ D+V G +A ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY-GSGSQT--RAFQYVSDLVNGLVALMN 314
Score = 125 (49.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 61/278 (21%), Positives = 108/278 (38%)
Query: 138 LLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWA 197
++E L+ ++ + HLA+ A M NP+ + +N G +N+L K + ++ A
Sbjct: 145 VVEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLA 200
Query: 198 SSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
S+S VYG + P SE + P + Y K+ E + + Y G+ + R F
Sbjct: 201 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 260
Query: 254 VYGPWGRPDMVYFFFTKN-ILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXX 312
+GP R M N IL+ + R F Y+ D+V G +A ++
Sbjct: 261 TFGP--RMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS 318
Query: 313 XXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFTHA 372
NLGN + + A D
Sbjct: 319 SPV--------------NLGNPEEHTILEFAQLIKNLVGSGSEIQFLS-EAQDDPQKRKP 363
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWY---LDYYSDS 407
++ A+ LG++P L+ GL K + ++ L+Y +++
Sbjct: 364 DIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANN 401
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 193 (73.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 65/240 (27%), Positives = 110/240 (45%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+L+TG AGFVG+H++ L G V +DNF T KR + ++ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 145
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+E L+ ++ + HLA+ A M NP+ + +N G +N+L K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 195 IWASSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
+ AS+S VYG + P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 251 FFTVYGPWGRPD--MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
F +GP + V F L+ +P+ ++ G T R F Y+ D+V G +A ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY-GSGSQT--RAFQYVSDLVNGLVALMN 314
Score = 125 (49.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 61/278 (21%), Positives = 108/278 (38%)
Query: 138 LLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWA 197
++E L+ ++ + HLA+ A M NP+ + +N G +N+L K + ++ A
Sbjct: 145 VVEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLA 200
Query: 198 SSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
S+S VYG + P SE + P + Y K+ E + + Y G+ + R F
Sbjct: 201 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 260
Query: 254 VYGPWGRPDMVYFFFTKN-ILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXX 312
+GP R M N IL+ + R F Y+ D+V G +A ++
Sbjct: 261 TFGP--RMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS 318
Query: 313 XXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFTHA 372
NLGN + + A D
Sbjct: 319 SPV--------------NLGNPEEHTILEFAQLIKNLVGSGSEIQFLS-EAQDDPQKRKP 363
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWY---LDYYSDS 407
++ A+ LG++P L+ GL K + ++ L+Y +++
Sbjct: 364 DIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANN 401
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 193 (73.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 65/240 (27%), Positives = 110/240 (45%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+L+TG AGFVG+H++ L G V +DNF T KR + ++ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 145
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+E L+ ++ + HLA+ A M NP+ + +N G +N+L K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 195 IWASSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
+ AS+S VYG + P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 251 FFTVYGPWGRPD--MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
F +GP + V F L+ +P+ ++ G T R F Y+ D+V G +A ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY-GSGSQT--RAFQYVSDLVNGLVALMN 314
Score = 125 (49.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 61/278 (21%), Positives = 108/278 (38%)
Query: 138 LLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWA 197
++E L+ ++ + HLA+ A M NP+ + +N G +N+L K + ++ A
Sbjct: 145 VVEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLA 200
Query: 198 SSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
S+S VYG + P SE + P + Y K+ E + + Y G+ + R F
Sbjct: 201 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 260
Query: 254 VYGPWGRPDMVYFFFTKN-ILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXX 312
+GP R M N IL+ + R F Y+ D+V G +A ++
Sbjct: 261 TFGP--RMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS 318
Query: 313 XXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFTHA 372
NLGN + + A D
Sbjct: 319 SPV--------------NLGNPEEHTILEFAQLIKNLVGSGSEIQFLS-EAQDDPQKRKP 363
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWY---LDYYSDS 407
++ A+ LG++P L+ GL K + ++ L+Y +++
Sbjct: 364 DIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANN 401
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 190 (71.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 87/351 (24%), Positives = 147/351 (41%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
++VTG AG++G+H L G V +DN ++ ++KR + + V DI
Sbjct: 8 IMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVESITGKEIEFHHV--DIM 65
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+ L+++F V+H A V + K P+ Y N+NIAG + LL + +
Sbjct: 66 NEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKK-L 124
Query: 195 IWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTY-NHIYGLSITGLRFFT 253
+++SS++VYG +P +E D ++ Y TK E I + LR+F
Sbjct: 125 VFSSSATVYGDPHTVPITE-DFPLSATNPYGRTKLYVEGILQDLCASDPEWNCIMLRYFN 183
Query: 254 VYG--PWGR--------PDMVYFFFTKNILKRKPVMIFEGPNH----ATVARDFTYIDDI 299
G P G P+ + + T+ + ++P++ G ++ T RDF ++ D+
Sbjct: 184 PVGAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRDFIHVVDL 243
Query: 300 VKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXX 359
KG ++AL +NLG V ++V
Sbjct: 244 AKGHISALSSLHSKKQGCVA---------YNLGTGRGYSVLEMVGALKQASHKEIPYQIV 294
Query: 360 PMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYL---DYYSDS 407
GDV + A+ S A +ELG+K T N + +W + YSDS
Sbjct: 295 SR-RKGDVASSFADPSKALKELGWKATHNQDDMCRDAWKWQSLNPNGYSDS 344
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 124 (48.7 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 37/113 (32%), Positives = 59/113 (52%)
Query: 75 VLVTGAAGFVGTHVSA-ALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+LVTG AGF+G+ V + D VV +D Y +L+ S+ + + DI
Sbjct: 3 ILVTGGAGFIGSAVVRHIIGNTQDCVVNVDKLT--YAGNLE-SLTSVADSPRYTFEKVDI 59
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACK 186
D LE++F+L + VMHLAA++ V ++ ++ +NI G LLEA +
Sbjct: 60 CDRTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAAR 112
Score = 85 (35.0 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 220 PSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVM 279
PSS Y+A+K + + + + YG YGP+ P+ + N L+ KP+
Sbjct: 181 PSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP 240
Query: 280 IFEGPNHATVARDFTYIDD 298
I+ G RD+ Y++D
Sbjct: 241 IY-GKGDQI--RDWLYVED 256
Score = 64 (27.6 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 380 ELGYKPTTNLQTGLKKFVRWYL 401
EL ++P +TGL+K V WYL
Sbjct: 332 ELDWQPQETFETGLRKTVEWYL 353
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 191 (72.3 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 65/240 (27%), Positives = 110/240 (45%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+LVTG AGFVG+H++ L G V +DNF T KR + ++ D+
Sbjct: 91 ILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 145
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+E L+ ++ + HLA+ A M NP+ + +N G +N+L K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 195 IWASSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
+ AS+S VYG + P +E + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 251 FFTVYGPWGRPD--MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
F +GP + V F L+ +P+ ++ G T R F Y+ D+V G +A ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY-GSGSQT--RAFQYVSDLVNGLVALMN 314
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 60/278 (21%), Positives = 108/278 (38%)
Query: 138 LLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWA 197
++E L+ ++ + HLA+ A M NP+ + +N G +N+L K + ++ A
Sbjct: 145 VVEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLA 200
Query: 198 SSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
S+S VYG + P +E + P + Y K+ E + + Y G+ + R F
Sbjct: 201 STSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 260
Query: 254 VYGPWGRPDMVYFFFTKN-ILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXX 312
+GP R M N IL+ + R F Y+ D+V G +A ++
Sbjct: 261 TFGP--RMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS 318
Query: 313 XXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFTHA 372
NLGN + + A D
Sbjct: 319 SPV--------------NLGNPEEHTILEFAQLIKNLVGSGSEIQFLS-EAQDDPQKRKP 363
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWY---LDYYSDS 407
++ A+ LG++P L+ GL K + ++ L+Y +++
Sbjct: 364 DIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANN 401
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 190 (71.9 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 64/240 (26%), Positives = 110/240 (45%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+L+TG AGFVG+H++ L G V +DNF T KR + ++ D+
Sbjct: 68 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 122
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+E L+ ++ + HLA+ A M NP+ + +N G +N+L K + +
Sbjct: 123 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 174
Query: 195 IWASSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
+ AS+S VYG + P +E + P + Y K+ E + + Y G+ + R
Sbjct: 175 LLASTSEVYGDPEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 234
Query: 251 FFTVYGPWGRPD--MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
F +GP + V F L+ +P+ ++ G T R F Y+ D+V G +A ++
Sbjct: 235 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY-GSGSQT--RAFQYVSDLVNGLVALMN 291
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 60/278 (21%), Positives = 108/278 (38%)
Query: 138 LLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWA 197
++E L+ ++ + HLA+ A M NP+ + +N G +N+L K + ++ A
Sbjct: 122 VVEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLA 177
Query: 198 SSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
S+S VYG + P +E + P + Y K+ E + + Y G+ + R F
Sbjct: 178 STSEVYGDPEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 237
Query: 254 VYGPWGRPDMVYFFFTKN-ILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXX 312
+GP R M N IL+ + R F Y+ D+V G +A ++
Sbjct: 238 TFGP--RMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS 295
Query: 313 XXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFTHA 372
NLGN + + A D
Sbjct: 296 SPV--------------NLGNPEEHTILEFAQLIKNLVGSGSEIQFLS-EAQDDPQKRKP 340
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWY---LDYYSDS 407
++ A+ LG++P L+ GL K + ++ L+Y +++
Sbjct: 341 DIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANN 378
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 188 (71.2 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 80/343 (23%), Positives = 149/343 (43%)
Query: 75 VLVTGAAGFVGTHVSAALRR--RGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
+L+TG G++G+H L + + +V +DN ++ L+R + + + F+ + D
Sbjct: 3 LLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSNSSTKVLERIK-QITNKTVTFI-KAD 60
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
+ D LE++FN K V+H A V + + P++Y +N++G + LL +
Sbjct: 61 VCDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMAKYQVKN 120
Query: 193 AIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTY-NHIYGLSITGLRF 251
++++SS++VYG N P +E T + Y TK E + SI LR+
Sbjct: 121 -LVFSSSATVYG-NNVSPLNETMATSATNP-YGQTKLMVEHVLFDLAKSDASWSIACLRY 177
Query: 252 FTVYG----------PWGRPDMVYFFFTKNILKR-KPVMIFEGPNH----ATVARDFTYI 296
F G P G P+ + + + + R + + IF G ++ T RD+ ++
Sbjct: 178 FNPIGAHQSGLIGENPNGIPNNLLPYVAQVAVGRLEQLQIF-GDDYDTQDGTGVRDYIHV 236
Query: 297 DDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXX 356
D+ +G + AL+ + NLG + V ++V+
Sbjct: 237 VDLAQGHVKALESLGHAKGTVKG------CQAINLGTGNGTSVLEIVNTFKDISKQDIPY 290
Query: 357 XXXPMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
P A GD+ +A+ SLA L ++ +L ++ RW
Sbjct: 291 QVVPRRA-GDLATVYADASLANELLDWQAKLDLTAMIQDTWRW 332
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 187 (70.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 84/343 (24%), Positives = 145/343 (42%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+L+TG AG++G+H L ++ +DN ++ SL R + + + F E +N
Sbjct: 3 ILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVK-EITGKQFEFYKENVLN 61
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+ E +F V+H A V + P++Y +NI + L + + N +
Sbjct: 62 REKMNE-IFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKN-F 119
Query: 195 IWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYG-LSITGLRFFT 253
I++SS++VYG+ K +P +E+ + Y TK E+I SI LR+F
Sbjct: 120 IFSSSATVYGIPKTLPITEEFPLSVTNP-YGQTKLMIEQIMRDVAKADDEWSIALLRYFN 178
Query: 254 VYG----------PWGRPDMVYFFFTKNIL-KRKPVMIF--EGPNH-ATVARDFTYIDDI 299
+G P G P+ + + T+ + K K + IF + P T RD+ ++ D+
Sbjct: 179 PFGAHQSGRIGEDPNGIPNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGVRDYIHVVDL 238
Query: 300 VKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXX 359
KG + AL+ + +NLG V ++V
Sbjct: 239 AKGHVKALEKVLKTKG----------IEAYNLGTGKGYSVLEMVKAFEKVSGKKIPYKVI 288
Query: 360 PMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLD 402
GDV A+VS A+RELG++ L+ RW ++
Sbjct: 289 GRRP-GDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVN 330
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 189 (71.6 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 65/239 (27%), Positives = 106/239 (44%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+L+TG AGFVG+H+ L +G V+ +DNF T KR L ++ DI
Sbjct: 118 ILITGGAGFVGSHLVDDLMVQGHEVIVVDNFF----TGRKRNVEHWLGHENFELIHHDIV 173
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+ L +E + HLA+ A + M NP+ + +N G +N+L K + +
Sbjct: 174 NPLFIE-------IDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRVMAK--V 224
Query: 195 IWASSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
+ AS+S VYG P E + P + Y K+ E +++ Y + + R
Sbjct: 225 LIASTSEVYGDPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVAR 284
Query: 251 FFTVYGPWGRPD--MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAAL 307
F YGP + V F L+ + + ++ G T R F Y+ D+V G +A +
Sbjct: 285 IFNTYGPRMHMNDGRVVSNFILQALRNETITVY-GNGKQT--RSFQYVSDLVDGMIALM 340
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 60/277 (21%), Positives = 107/277 (38%)
Query: 131 GDINDSLLLEKLFN--LVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTA 188
G N L+ + N ++ + HLA+ A + M NP+ + +N G +N+L K
Sbjct: 161 GHENFELIHHDIVNPLFIEIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRV 220
Query: 189 NPQPAIIWASSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGL 244
+ ++ AS+S VYG P E + P + Y K+ E +++ Y +
Sbjct: 221 MAK--VLIASTSEVYGDPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKV 278
Query: 245 SITGLRFFTVYGPWGRPDMVYFFFTKN-ILKRKPVMIFEGPNHATVARDFTYIDDIVKGC 303
+ R F YGP R M N IL+ + R F Y+ D+V G
Sbjct: 279 QVRVARIFNTYGP--RMHMNDGRVVSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGM 336
Query: 304 LAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPA 363
+A + + NLGN + +G+
Sbjct: 337 IALM--------------ASNYTQPVNLGNPVEQTIGEFAEIIKKLVGGPSVIKQSKAME 382
Query: 364 NGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWY 400
+ D +++ AR+ L ++P L+TGL++ + ++
Sbjct: 383 D-DPQRRKPDITRARQLLHWEPKVPLETGLQRTISYF 418
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 180 (68.4 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 65/241 (26%), Positives = 106/241 (43%)
Query: 75 VLVTGAAGFVGTH-VSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+LVTG AGF+G+H V ++ + V+ DN Y T K + ++ D+
Sbjct: 33 ILVTGGAGFIGSHLVDKLMQNEKNEVIVADN----YFTGSKDNLKKWIGHPRFELIRHDV 88
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
E LF V+ + HLA A + NP+ + +N+ G +N+L K +
Sbjct: 89 T-----EPLF--VEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-- 139
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTD-QP---SSLYAATKKAGEEIAHTYNHIYGLSITGL 249
I+ S+S VYG P +E + P S Y K+ E + Y+ +G+ I
Sbjct: 140 ILLTSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 199
Query: 250 RFFTVYGPWGRPD--MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAAL 307
R F YGP D V F L+ + + + + P T R F Y+ D+V+G + +
Sbjct: 200 RIFNTYGPRMNIDDGRVVSNFIAQALRGEALTV-QKPG--TQTRSFCYVSDMVEGLMRLM 256
Query: 308 D 308
+
Sbjct: 257 E 257
Score = 43 (20.2 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 373 NVSLARRELGYKPTTNLQTGL 393
++S A+ LG++P L+ GL
Sbjct: 307 DISKAKEVLGWEPKVKLREGL 327
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 184 (69.8 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 63/230 (27%), Positives = 113/230 (49%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGV--VGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
++V+G AGF+G H + ++ +D N Y + + +L + V D
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLN-YASNATEI--ENLKSFSNFEFVHLD 65
Query: 133 INDSLLLEKLFNLVK-FSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
++D+L E L + K + +++ AA++ V + K+P+ + +NI NLLE C NP
Sbjct: 66 LSDNL--EYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPS 122
Query: 192 PA-IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
+ S+ VYG + ++++ P++ Y+A+K A + I +Y + Y L IT LR
Sbjct: 123 IGYFLHISTDEVYG-DVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILR 181
Query: 251 FFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIV 300
VYGP P+ + + I ++KP+ + T R + Y+ DIV
Sbjct: 182 PNNVYGPLQYPEKIIPLTIQCINEKKPIPVH---GKGTNKRKYLYVLDIV 228
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 184 (69.8 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 63/230 (27%), Positives = 113/230 (49%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGV--VGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
++V+G AGF+G H + ++ +D N Y + + +L + V D
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLN-YASNATEI--ENLKSFSNFEFVHLD 65
Query: 133 INDSLLLEKLFNLVK-FSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
++D+L E L + K + +++ AA++ V + K+P+ + +NI NLLE C NP
Sbjct: 66 LSDNL--EYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPS 122
Query: 192 PA-IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
+ S+ VYG + ++++ P++ Y+A+K A + I +Y + Y L IT LR
Sbjct: 123 IGYFLHISTDEVYG-DVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILR 181
Query: 251 FFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIV 300
VYGP P+ + + I ++KP+ + T R + Y+ DIV
Sbjct: 182 PNNVYGPLQYPEKIIPLTIQCINEKKPIPVH---GKGTNKRKYLYVLDIV 228
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 178 (67.7 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 63/241 (26%), Positives = 103/241 (42%)
Query: 75 VLVTGAAGFVGTH-VSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+L++G AGF+G+H V + + VV DN Y T K + ++ D+
Sbjct: 47 ILISGGAGFIGSHLVDKLMENEKNEVVVADN----YFTGSKENLKKWIGHPRFELIRHDV 102
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
+ LL+E + HLA A + NP+ + +N+ G +N+L K +
Sbjct: 103 TEPLLIE-------VDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-- 153
Query: 194 IIWASSSSVYG--LNKKIPFSEKDRTDQPS--SLYAATKKAGEEIAHTYNHIYGLSITGL 249
I+ S+S VYG L P S + S Y K+ E + Y+ +G+ I
Sbjct: 154 ILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 213
Query: 250 RFFTVYGPWGRPD--MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAAL 307
R F YGP D V F L+ + + + + P T R F Y+ D+V G + +
Sbjct: 214 RIFNTYGPRMNIDDGRVVSNFIAQALRGEALTV-QKPG--TQTRSFCYVSDMVDGLIRLM 270
Query: 308 D 308
+
Sbjct: 271 E 271
Score = 43 (20.2 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 373 NVSLARRELGYKPTTNLQTGL 393
++S A+ LG++P L+ GL
Sbjct: 321 DISKAKEVLGWEPKVKLREGL 341
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 163 (62.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 69/243 (28%), Positives = 108/243 (44%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGD--------GVVGLDNFNDYYDTSLKR-GRASLLERAG 125
+LVTG AGF+G+H +L GD V +D Y +L+ AS R
Sbjct: 3 ILVTGGAGFIGSHFVTSLIS-GDIATPQPVTQVTVVDKLG--YGGNLRNLAEASADPRFS 59
Query: 126 VFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEAC 185
V GDI D L+E L + + V H AA+ V ++ +V SN+ G LL+A
Sbjct: 60 F--VRGDICDEGLIEGL--MARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAA 115
Query: 186 KTANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLS 245
+ + S+ VYG ++E P+S YAA+K + +A Y+ +G+
Sbjct: 116 -LRHHIGRFLHVSTDEVYGSIDTGSWAEGHPL-APNSPYAASKAGSDLLALAYHQTHGMD 173
Query: 246 ITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIF-EGPNHATVARDFTYIDDIVKGCL 304
+ R YGP P+ + F +L V ++ +G N RD+ ++ D +G
Sbjct: 174 VVVTRCSNNYGPRQFPEKMIPLFVTRLLDGLDVPVYGDGRN----IRDWLHVSDHCRGLA 229
Query: 305 AAL 307
AL
Sbjct: 230 LAL 232
Score = 56 (24.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 380 ELGYKPTTNLQTGLKKFVRWY 400
ELGY+P + G+ + V WY
Sbjct: 292 ELGYRPRVDFTDGIAETVAWY 312
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 177 (67.4 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 60/181 (33%), Positives = 89/181 (49%)
Query: 77 VTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRG--RASLLERAGVFVVEGDIN 134
+TG G G++++ L R+ V G+ + ++T E A +F+ GDI
Sbjct: 7 ITGITGQDGSYLAELLLRKDYEVHGMIRRSSSFNTERLSDIYEEKHKENARLFLHYGDIT 66
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIA-GFVNLLEACKTANPQPA 193
D L+L KL + +K V +LAAQ+ VR + P+ Y I G +N+LEA K A+
Sbjct: 67 DGLVLNKLIHEIKPHEVYNLAAQSHVRVSFDIPV-YTMETIGLGTLNILEAIKNADNAKE 125
Query: 194 IIW--ASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGL-SITGLR 250
I + ASSS +YG K +P +E + P S YA K Y YGL + TG+
Sbjct: 126 IRFYQASSSEMYGDVKSVPQTESTPFN-PRSPYACAKVFAHYQTINYRESYGLHASTGIL 184
Query: 251 F 251
F
Sbjct: 185 F 185
Score = 39 (18.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 362 PANGDVLFTHANVSLARRELGYKPTTNLQTGLK 394
PA D+L A+ +LG++P T+ +K
Sbjct: 287 PAEVDLLL--GEPKKAKEKLGWQPNTSFHKLIK 317
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 175 (66.7 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 62/241 (25%), Positives = 103/241 (42%)
Query: 75 VLVTGAAGFVGTH-VSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+L++G AGF+G+H V + + V+ DN Y T K + ++ D+
Sbjct: 31 ILISGGAGFIGSHLVDKLMENEKNEVIVADN----YFTGSKDNLKKWIGHPRFELIRHDV 86
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
+ LL+E + HLA A + NP+ + +N+ G +N+L K +
Sbjct: 87 TEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-- 137
Query: 194 IIWASSSSVYG--LNKKIPFSEKDRTDQPS--SLYAATKKAGEEIAHTYNHIYGLSITGL 249
I+ S+S VYG L P S + S Y K+ E + Y+ +G+ I
Sbjct: 138 ILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 197
Query: 250 RFFTVYGPWGRPD--MVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAAL 307
R F YGP D V F L+ + + + + P T R F Y+ D+V G + +
Sbjct: 198 RIFNTYGPRMNIDDGRVVSNFIAQALRGEALTV-QKPG--TQTRSFCYVSDMVDGLMRLM 254
Query: 308 D 308
+
Sbjct: 255 E 255
Score = 40 (19.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 373 NVSLARRELGYKPTTNLQTGL 393
+++ A+ LG++P L+ GL
Sbjct: 305 DITKAKEVLGWEPKVKLREGL 325
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 177 (67.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 83/321 (25%), Positives = 130/321 (40%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG 131
G +L+TGA GFVG ++ L G ++ + ++ SL R G
Sbjct: 3 GRRILITGANGFVGGYMIRELVAAGY------QHSELHTLTVSGAEQSL--RIGQ-AHRC 53
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
D+ DS + +L V+ + ++HLAA A A +P + N L EA +P
Sbjct: 54 DLRDSASIHRLLQEVQPTGIVHLAAIALPSQAKADPSAAWAVNFEAVRQLGEAVLACSPH 113
Query: 192 PAIIWASSSSVYGLN-KKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGLSITGL 249
+++A SS YG + + + + T +P + YAATK A + +A GL+
Sbjct: 114 AVLVFAGSSESYGASFNTVAGAVNEGTALRPLTPYAATKAAAD-VALGQMRNDGLNAVRF 172
Query: 250 RFFTVYGPWGRPDMVYFFFTKNILK----RKPVMIFEGPNHATVARDFTYIDDIVKGCLA 305
R F GP PD V F I + P +I G + RDF + D+V+G
Sbjct: 173 RAFNHTGPGQSPDYVVASFAAQIAQIIAGDHPPVIRVG--NLDAMRDFVDVRDVVRGYRL 230
Query: 306 ALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPAN- 364
AL+ VFNL + +P + +++ P
Sbjct: 231 ALETELDPVSEG----------VFNLASGTPRSIRSILNTLIDIAGVDIAIETDPAKLRK 280
Query: 365 GDVLFTHANVSLARRELGYKP 385
DV T + + AR ELG+ P
Sbjct: 281 NDVPRTWGDANRARTELGWVP 301
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 177 (67.4 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 55/197 (27%), Positives = 97/197 (49%)
Query: 67 RSRAGGHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGV 126
R G VLVTG AG++G+H + L + V +DN + +++ + E +
Sbjct: 65 RHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRL 124
Query: 127 FVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACK 186
+ D+ D+ + K+F F VMH AA A V + + P+ Y ++ + + +LE
Sbjct: 125 QFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETM- 183
Query: 187 TANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQ-PSSLYAATKKAGEEIAHTYNHIYGLS 245
A+ +I++S+ + YG +P +E+ T Q P + Y KK E+I ++ ++
Sbjct: 184 AAHGVKTLIYSSTCATYGEPDIMPITEE--TPQVPINPYGKAKKMAEDIILDFSKNSDMA 241
Query: 246 ITGLRFFTVYG--PWGR 260
+ LR+F V G P GR
Sbjct: 242 VMILRYFNVIGSDPEGR 258
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 140 (54.3 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 40/137 (29%), Positives = 65/137 (47%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
VLVTG G++G+ + AL G VV DN Y ++ R L+ + D+
Sbjct: 6 VLVTGGTGYIGSFTTLALLEAGYKVVVADNL--YNSSAEALNRIELISGKKAEFAQLDVT 63
Query: 135 DSLLLEKLFNL-VKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
D +K+F V+H AA V + + P+ Y + N+ G + LL + N
Sbjct: 64 DEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSMVRHNVTN- 122
Query: 194 IIWASSSSVYGLNKKIP 210
I+++SS++VYG + P
Sbjct: 123 IVFSSSATVYGDATRFP 139
Score = 78 (32.5 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 33/130 (25%), Positives = 53/130 (40%)
Query: 274 KRKPVMIFEGPNHA----TVARDFTYIDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVF 329
KR+ +++F G ++A T RD+ +I D+ G L AL+ +R +
Sbjct: 231 KREKLLVF-GDDYASHDGTAIRDYIHILDLADGHLKALNYLRANNPG---------VRAW 280
Query: 330 NLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFTHANVSLARRELGYKPTTNL 389
NLG V +++ P A GDVL +N + A ELG+K L
Sbjct: 281 NLGTGRGSTVYEMIRAFSKAVGRDLPYEVAPRRA-GDVLNLTSNPTRANTELGWKAQRTL 339
Query: 390 QTGLKKFVRW 399
+ + W
Sbjct: 340 EQACEDLWLW 349
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 172 (65.6 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 66/252 (26%), Positives = 111/252 (44%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVF-VVEGDI 133
+L++G AG++G+H + + LDN + +++ L++ F E D+
Sbjct: 3 ILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIED-----LQKIRAFKFFEQDL 57
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
+D ++ LF KF ++H AA V +M+NP+ Y +N NL+E C
Sbjct: 58 SDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNK- 116
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEI---AHTYNHIYGLSITGLR 250
I++S+++ YG + P + P + Y +K EE+ A N + I LR
Sbjct: 117 FIFSSTAATYG-EPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCI--LR 173
Query: 251 FFTVYGPWGRPDMVYFFFTKNIL----------KRKPVMIFEGPNH----ATVARDFTYI 296
+F V G + + +L KR + IF G ++ T RDF ++
Sbjct: 174 YFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIF-GDDYDTKDGTCIRDFIHV 232
Query: 297 DDIVKGCLAALD 308
DDI LA LD
Sbjct: 233 DDISSAHLATLD 244
>UNIPROTKB|Q5QPP4 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 EMBL:AL031295 UniGene:Hs.632380 HGNC:HGNC:4116
HOVERGEN:HBG001396 IPI:IPI00030229 SMR:Q5QPP4
Ensembl:ENST00000429356 Uniprot:Q5QPP4
Length = 239
Score = 148 (57.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 51/191 (26%), Positives = 91/191 (47%)
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
DI D L++LF F V+H A V +++ P+ Y N+ G + LLE K A+
Sbjct: 2 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHGV 60
Query: 192 PAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAH-------TYNHIY-- 242
++++SS++VYG + +P E T ++ Y +K EE+ T+N +
Sbjct: 61 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 120
Query: 243 GLSITGLRFFTVYG--PWGRPDMVYFFFTKNILKRKPVMIFEGPNH----ATVARDFTYI 296
+ TG G P G P+ + + ++ + R+ + G ++ T RD+ ++
Sbjct: 121 YFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHV 180
Query: 297 DDIVKGCLAAL 307
D+ KG +AAL
Sbjct: 181 VDLAKGHIAAL 191
Score = 53 (23.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 365 GDVLFTHANVSLARRELGYKPTTNL 389
GDV +AN SLA+ ELG+ L
Sbjct: 212 GDVAACYANPSLAQEELGWTAALGL 236
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 172 (65.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 63/242 (26%), Positives = 109/242 (45%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+L+TG AGFVG+H++ L G V +DNF T KR + ++ D+
Sbjct: 89 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 143
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+E L+ ++ + HLA+ A M NP+ + +N G +N+L K + +
Sbjct: 144 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 195
Query: 195 IWASSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
+ AS+S VYG + P +E + P + Y K+ E + + Y G+ + R
Sbjct: 196 LLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 255
Query: 251 FFTVYGPWGRPDM----VYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAA 306
F +G R M V F L+ + + ++ G T R F Y+ D+V G ++
Sbjct: 256 IFNTFG--SRMHMNDGRVVSNFILQALQGEALTVY-GSGSQT--RAFQYVSDLVNGLVSL 310
Query: 307 LD 308
++
Sbjct: 311 MN 312
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 57/268 (21%), Positives = 103/268 (38%)
Query: 138 LLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWA 197
++E L+ ++ + HLA+ A M NP+ + +N G +N+L K + ++ A
Sbjct: 143 VVEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLA 198
Query: 198 SSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
S+S VYG + P +E + P + Y K+ E + + Y G+ + R F
Sbjct: 199 STSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 258
Query: 254 VYGPWGRPDMVYFFFTKN-ILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALDXXXX 312
+G R M N IL+ + R F Y+ D+V G ++ ++
Sbjct: 259 TFG--SRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNIS 316
Query: 313 XXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMPANGDVLFTHA 372
NLGN + + P A D
Sbjct: 317 SPV--------------NLGNPEEHTILEFAQLIKSLVASRSHIQFLP-EAQDDPQRRRP 361
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWY 400
++ A+ LG++P L+ GL K ++++
Sbjct: 362 DIRKAKLLLGWEPVVPLEEGLNKTIQYF 389
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 161 (61.7 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 59/207 (28%), Positives = 94/207 (45%)
Query: 76 LVTGAAGFVGTHVSAALRRRGD-GVVGLDNFNDYYDTSLKRG-RASLLERAGVFVVEGDI 133
L+TG G VG+ ++ L D V+G+ + + D R + +R +F D+
Sbjct: 6 LITGFTGQVGSQMADFLLANTDYEVIGMMRWQEPMDNIYHLSDRINKKDRISIFYA--DL 63
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ-- 191
ND L+KLF + + HLAAQ+ + + P+ + +NI G N+LE + +
Sbjct: 64 NDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKDG 123
Query: 192 --PAIIWASSSSVYGLNKK-IPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITG 248
P + SSS VYG K I +E D T +S Y+ +K + + Y Y +
Sbjct: 124 YDPVVHVCSSSEVYGRAKVGIKLNE-DTTFHGASPYSISKIGTDYLGRFYGEAYNIRTFV 182
Query: 249 LRFFTVYGPWGRPDMVYFFFTKNILKR 275
R T GP R D+ FF + K+
Sbjct: 183 TRMGTHSGP-RRSDV---FFESTVAKQ 205
>UNIPROTKB|G4MZC9 [details] [associations]
symbol:MGG_11399 "Sterol-4-alpha-carboxylate
3-dehydrogenase" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006696 EMBL:CM001232
KO:K07748 GO:GO:0000252 RefSeq:XP_003713491.1
ProteinModelPortal:G4MZC9 EnsemblFungi:MGG_11399T0 GeneID:5051352
KEGG:mgr:MGG_11399 Uniprot:G4MZC9
Length = 371
Score = 128 (50.1 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 65/249 (26%), Positives = 110/249 (44%)
Query: 64 SRPRSRAGGHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLER 123
++P ++ VLV G GF+G+H+ L LD++ +++ R + R
Sbjct: 2 AKPETKFNLGSVLVVGGCGFLGSHIVRML---------LDDYKCSAVSAVDL-RCTRNRR 51
Query: 124 AGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLE 183
GV + DI ++ L +F+ V+ V+H A+ ++ + + N+ G ++E
Sbjct: 52 EGVQYHDADITNAERLVSVFDEVRPDVVIHTASPLAQGNSVVHRDIFYKVNVEGTRTVVE 111
Query: 184 ACKTANPQPAIIWASSSSVYGLNKK--IPFSEK---DRTDQPSSLYAATKKAGEEIAHTY 238
ACK A + A+++ SS+SV N I E+ R D+ + Y+ TK EEI
Sbjct: 112 ACKKAGVK-ALVFTSSASVISDNVSDLINADERWPMIRGDKQTEYYSDTKAEAEEIVLKA 170
Query: 239 NHIYGLSITGLRFFTVYGPWGRPDMVYFFFTKNILKRK-PVMIFEGPNHATVARDFTYID 297
N L +R ++G G MV K + K V + G N+ DFTY
Sbjct: 171 NEPGKLLTAAIRPSGIFGE-G-DSMVTANLVKTYREGKWKVQV--GDNNNLF--DFTYAG 224
Query: 298 DIVKGCLAA 306
++ L A
Sbjct: 225 NVAHAHLLA 233
Score = 76 (31.8 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 12/37 (32%), Positives = 26/37 (70%)
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWYLDYYSDSGK 409
N++ A++ LGY P +++ G+++ V++ LD ++GK
Sbjct: 332 NITKAKQRLGYAPIVSMEEGVRRGVQYILDQEKETGK 368
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 141 (54.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 47/168 (27%), Positives = 78/168 (46%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+L+TG AGFVG+H++ L G V +DNF T KR + ++ D+
Sbjct: 34 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 88
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
+E L+ ++ + HLA+ A M NP+ + +N G +N+L K + +
Sbjct: 89 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 140
Query: 195 IWASSSSVYGLNKKIPFSEK--DRTDQ--PSSLYAATKKAGEEIAHTY 238
+ AS+S VYG + P SE + P + Y K+ E + + Y
Sbjct: 141 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY 188
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 157 (60.3 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 63/243 (25%), Positives = 101/243 (41%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+ +TGA GF+ +H++ L+ G V+ D + + T +F E +
Sbjct: 30 ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------------DMFCDEFHLV 77
Query: 135 DSLLLEKLFNLVK-FSHVMHLAAQ-AGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
D ++E + + HV +LAA G+ + N + +N N++EA + N
Sbjct: 78 DLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARI-NGIK 136
Query: 193 AIIWASSSSVYGLNKK-----IPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGLSI 246
+ASS+ +Y K+ + E D +P Y K A EE+ YN +G+
Sbjct: 137 RFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIEC 196
Query: 247 TGLRFFTVYGP---W--GRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVK 301
RF +YGP W GR F K + FE R FT+ID+ V+
Sbjct: 197 RIGRFHNIYGPFGTWKGGREKAPAAFCRK---AQTSTDRFEMWGDGLQTRSFTFIDECVE 253
Query: 302 GCL 304
G L
Sbjct: 254 GVL 256
Score = 43 (20.2 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 361 MPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
+P V +++ +L + +LG+ P L+ GL+ W
Sbjct: 297 IPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFW 335
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 146 (56.5 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 51/197 (25%), Positives = 95/197 (48%)
Query: 76 LVTGAAGFVGTH-VSAALRRRGD-GVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
L+TG AGF+G++ + A+ + D +D + Y + +L + +E D+
Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLS-YVSNYTTVFLSKVLNQPNFRFLEMDL 71
Query: 134 --NDSLLLEKLFN---LVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTA 188
N L + + + K +H+++ AA++ V + +P+ + +NI NLLE +
Sbjct: 72 ATNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRIL 131
Query: 189 NPQPA-------IIWASSSSVYG-LNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNH 240
+ + S+ VYG ++ EK + + P+S YAA+K A + I +Y +
Sbjct: 132 LGKKEELRNRLNFVHVSTDEVYGEQDENASVDEKSKLN-PTSPYAASKAAVDLIIQSYRY 190
Query: 241 IYGLSITGLRFFTVYGP 257
Y +S+T +R VYGP
Sbjct: 191 SYKISVTVIRANNVYGP 207
Score = 52 (23.4 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 379 RELGYKPTTNLQTGLKKFVRWY 400
+ LG++P L+TGL+K + Y
Sbjct: 343 KSLGWRPQIPLETGLRKLIDEY 364
>TIGR_CMR|CPS_2156 [details] [associations]
symbol:CPS_2156 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:167879 "Colwellia
psychrerythraea 34H" [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=ISS] [GO:0006694 "steroid
biosynthetic process" evidence=ISS] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 HOGENOM:HOG000167989
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0016853 EMBL:CP000083 GenomeReviews:CP000083_GR OMA:KAYFLSN
RefSeq:YP_268881.1 ProteinModelPortal:Q482Y6 STRING:Q482Y6
GeneID:3521240 KEGG:cps:CPS_2156 PATRIC:21467431
ProtClustDB:CLSK906403 BioCyc:CPSY167879:GI48-2226-MONOMER
Uniprot:Q482Y6
Length = 400
Score = 143 (55.4 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 66/228 (28%), Positives = 102/228 (44%)
Query: 65 RPRSRAGGHI--VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLE 122
+P S G V VTGA GF+GT + LR L N T RG L
Sbjct: 35 QPLSELAGQTNHVFVTGAGGFLGTAICRLLR--------LANIKV---TGFARGHYPELS 83
Query: 123 RAGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLL 182
+ GV +V+GDI D LL++ + V H+AA+AGV + K+ Y N+ G N++
Sbjct: 84 QMGVNMVQGDITDFALLKETMHSCDL--VFHVAAKAGV-WGSKD--DYFKPNVQGAKNII 138
Query: 183 EACKTANPQPAIIWASSSSVY--GLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNH 240
+AC+ +++ S+ SV G+++ + D + Y +K E++ N
Sbjct: 139 QACQEL-AITRLVYTSTPSVTFAGVDEAGIDESQPYADNFLNFYGESKALAEQLV--LNA 195
Query: 241 IYGLSITGLRFFTVYGPWGRPDMVYFFFTKNILKR---KPVMIFEGPN 285
L +G + T G Y KN+LK +P +I+ GPN
Sbjct: 196 SQDLKKSGNQSTTQATLQGDNQNSY---QKNVLKTVALRPHLIW-GPN 239
Score = 56 (24.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 8/23 (34%), Positives = 18/23 (78%)
Query: 373 NVSLARRELGYKPTTNLQTGLKK 395
++S A+++LGY P +++ G+K+
Sbjct: 369 DISAAKKDLGYTPLISIEEGMKQ 391
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 154 (59.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 52/185 (28%), Positives = 83/185 (44%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
V +TGA G +G+H++ L G V + Y ++ S L+ G E DI
Sbjct: 3 VWITGAGGMMGSHLAEMLLAAGHDV-----YATYCRPTID---PSDLQFNGA---EVDIT 51
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
D + + V HLAAQ+ + P+ + +N+ G + EA + P I
Sbjct: 52 DWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHAKI 111
Query: 195 IWASSSSVYGL--NKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFF 252
I A SS+ YG ++P +E+ R +P Y +K A + +A+ Y+ YG+ R F
Sbjct: 112 IVAGSSAEYGFVDPSEVPINER-RELRPLHPYGVSKAATDMLAYQYHKSYGMHTVVARIF 170
Query: 253 TVYGP 257
GP
Sbjct: 171 NCTGP 175
>UNIPROTKB|Q5QPP3 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 TIGRFAMs:TIGR01179 EMBL:AL031295
UniGene:Hs.632380 HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644339
SMR:Q5QPP3 Ensembl:ENST00000418277 Uniprot:Q5QPP3
Length = 227
Score = 148 (57.2 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 51/191 (26%), Positives = 91/191 (47%)
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
DI D L++LF F V+H A V +++ P+ Y N+ G + LLE K A+
Sbjct: 2 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHGV 60
Query: 192 PAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAH-------TYNHIY-- 242
++++SS++VYG + +P E T ++ Y +K EE+ T+N +
Sbjct: 61 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 120
Query: 243 GLSITGLRFFTVYG--PWGRPDMVYFFFTKNILKRKPVMIFEGPNH----ATVARDFTYI 296
+ TG G P G P+ + + ++ + R+ + G ++ T RD+ ++
Sbjct: 121 YFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHV 180
Query: 297 DDIVKGCLAAL 307
D+ KG +AAL
Sbjct: 181 VDLAKGHIAAL 191
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 153 (58.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 60/230 (26%), Positives = 110/230 (47%)
Query: 75 VLVTGAAGFVGT-HVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+LVTGAAGF+G+ +V L G V + + A++ GDI
Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDI 64
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
D+ + V+HLAA++ V ++ + +V +N+ G LL+A T + +
Sbjct: 65 CDAPGRRVMAGQ---DQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAA-TRHGVAS 120
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
+ S+ VYG + ++E D +P+S Y+A+K +G+ +A ++ +GL + R
Sbjct: 121 FVQVSTDEVYGSLEHGSWTE-DEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSN 179
Query: 254 VYGPWGRPDMVYFFFTKNILKRKPVMIF-EGPNHATVARDFTYIDDIVKG 302
YGP P+ + F ++ V ++ +G N R++ ++DD V+G
Sbjct: 180 NYGPRQFPEKLIPRFITLLMDGHRVPLYGDGLN----VREWLHVDDHVRG 225
>UNIPROTKB|Q81V79 [details] [associations]
symbol:BA_0621 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000034276
OMA:DYAVEIF RefSeq:NP_843152.1 RefSeq:YP_017248.1
ProteinModelPortal:Q81V79 SMR:Q81V79 DNASU:1087994
EnsemblBacteria:EBBACT00000011110 EnsemblBacteria:EBBACT00000017957
GeneID:1087994 GeneID:2814938 KEGG:ban:BA_0621 KEGG:bar:GBAA_0621
PATRIC:18778842 ProtClustDB:CLSK865117
BioCyc:BANT261594:GJ7F-674-MONOMER Uniprot:Q81V79
Length = 317
Score = 152 (58.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+LVTG+ G +G+ + LR V G N T ++ + ++ +G F D+
Sbjct: 4 ILVTGSLGQIGSELVMKLR----DVYGASNV---IATDIRETDSEVVT-SGPFETL-DVT 54
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
D L + + ++HLAA A KNP+ N N+ G VN LEA + N +
Sbjct: 55 DGQKLHDIAKRNEVDTIIHLAALLSAT-AEKNPLFAWNLNMGGLVNALEAARELNCK--F 111
Query: 195 IWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRF 251
SS +G + + +D +P+++Y K AGE + Y+ +G+ G+RF
Sbjct: 112 FTPSSIGAFGPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRF 168
>TIGR_CMR|BA_0621 [details] [associations]
symbol:BA_0621 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
GO:GO:0044237 HOGENOM:HOG000034276 OMA:DYAVEIF RefSeq:NP_843152.1
RefSeq:YP_017248.1 ProteinModelPortal:Q81V79 SMR:Q81V79
DNASU:1087994 EnsemblBacteria:EBBACT00000011110
EnsemblBacteria:EBBACT00000017957 GeneID:1087994 GeneID:2814938
KEGG:ban:BA_0621 KEGG:bar:GBAA_0621 PATRIC:18778842
ProtClustDB:CLSK865117 BioCyc:BANT261594:GJ7F-674-MONOMER
Uniprot:Q81V79
Length = 317
Score = 152 (58.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+LVTG+ G +G+ + LR V G N T ++ + ++ +G F D+
Sbjct: 4 ILVTGSLGQIGSELVMKLR----DVYGASNV---IATDIRETDSEVVT-SGPFETL-DVT 54
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAI 194
D L + + ++HLAA A KNP+ N N+ G VN LEA + N +
Sbjct: 55 DGQKLHDIAKRNEVDTIIHLAALLSAT-AEKNPLFAWNLNMGGLVNALEAARELNCK--F 111
Query: 195 IWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRF 251
SS +G + + +D +P+++Y K AGE + Y+ +G+ G+RF
Sbjct: 112 FTPSSIGAFGPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRF 168
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 152 (58.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 59/231 (25%), Positives = 93/231 (40%)
Query: 75 VLVTGAAGFVGT-HVSAALRR-RGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
VL+TG GF+G+ +++ + + + D + S + E VE
Sbjct: 11 VLITGGCGFIGSNYINFTFNKWKNTKFINYDKLA--FGASPLHVEKEIRESPRYKFVEAA 68
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
+ D L K + V+H AA V + + + + NI LLE+ + P
Sbjct: 69 LEDQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTTTLLESIVNS-PYK 127
Query: 193 AI---IWASSSSVYG--LNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSIT 247
+ + S+ VYG P SE P++ YAA+K A E + +Y H Y L
Sbjct: 128 GVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYV 187
Query: 248 GLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDD 298
+R VYGP + FTK L KP + H R + Y++D
Sbjct: 188 MVRMNNVYGPRQIHTKLIPKFTKLALDGKPYPLMGDGLHT---RSWMYVED 235
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 53/186 (28%), Positives = 92/186 (49%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS-LKRGRASLLERAG--VFVVE 130
+ L+TG +G G++++ L +G V G+ + ++T+ ++ ++ + G F +
Sbjct: 52 VALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLH 111
Query: 131 -GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEA---CK 186
GD+ DS L KL + ++ + V HLAAQ+ V+ + P + G + LL+A C+
Sbjct: 112 YGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACR 171
Query: 187 TANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGL-S 245
+ AS+S +YG ++IP SEK P S YA K G I Y Y + +
Sbjct: 172 LTE-KVRFYQASTSELYGKVQEIPQSEKTPF-YPRSPYAVAKMYGYWIVVNYREAYNMFA 229
Query: 246 ITGLRF 251
G+ F
Sbjct: 230 CNGILF 235
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 53/186 (28%), Positives = 92/186 (49%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS-LKRGRASLLERAG--VFVVE 130
+ L+TG +G G++++ L +G V G+ + ++T+ ++ ++ + G F +
Sbjct: 52 VALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLH 111
Query: 131 -GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEA---CK 186
GD+ DS L KL + ++ + V HLAAQ+ V+ + P + G + LL+A C+
Sbjct: 112 YGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACR 171
Query: 187 TANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGL-S 245
+ AS+S +YG ++IP SEK P S YA K G I Y Y + +
Sbjct: 172 LTE-KVRFYQASTSELYGKVQEIPQSEKTPF-YPRSPYAVAKMYGYWIVVNYREAYNMFA 229
Query: 246 ITGLRF 251
G+ F
Sbjct: 230 CNGILF 235
>UNIPROTKB|O53454 [details] [associations]
symbol:MT1137 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:1773 "Mycobacterium tuberculosis"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0030283 "testosterone dehydrogenase
[NAD(P)] activity" evidence=IDA] [GO:0070403 "NAD+ binding"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886 EMBL:BX842575
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0030283 PIR:H70897
RefSeq:NP_215622.1 RefSeq:NP_335580.1 RefSeq:YP_006514475.1
ProteinModelPortal:O53454 SMR:O53454 PRIDE:O53454
EnsemblBacteria:EBMYCT00000002215 EnsemblBacteria:EBMYCT00000071008
GeneID:13319678 GeneID:886004 GeneID:924962 KEGG:mtc:MT1137
KEGG:mtu:Rv1106c KEGG:mtv:RVBD_1106c PATRIC:18124264
TubercuList:Rv1106c KO:K16045 OMA:IQLQPTF ProtClustDB:CLSK790953
BioCyc:MetaCyc:MONOMER-16889 BindingDB:O53454 ChEMBL:CHEMBL1744528
GO:GO:0070403 GO:GO:0016042 GO:GO:0008202 Uniprot:O53454
Length = 370
Score = 134 (52.2 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 63/239 (26%), Positives = 102/239 (42%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
VLVTG AGFVG ++ L RG V D R + L + V++GDI
Sbjct: 17 VLVTGGAGFVGANLVTTLLDRGHWVRSFD-----------RAPSLLPAHPQLEVLQGDIT 65
Query: 135 DS----LLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
D+ ++ + + + ++ L A V + VN + G NLL A + A
Sbjct: 66 DADVCAAAVDGIDTIFHTAAIIELMGGASVTDEYRQRSFAVN--VGGTENLLHAGQRAGV 123
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDR--TDQPSSLYAATKKAGEEIAHTYNHIYGLSITG 248
Q + +S+S V G + I ++ TD+ + LY TK E N + G+
Sbjct: 124 QRFVYTSSNSVVMG-GQNIAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCA 182
Query: 249 LRFFTVYGPWGRPDMVYFF-FTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAA 306
+R G WG D F +++LK V + G A + D +Y+ +++ G + A
Sbjct: 183 IR---PSGIWGNGDQTMFRKLFESVLKGH-VKVLVGRKSARL--DNSYVHNLIHGFILA 235
Score = 59 (25.8 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 360 PMPANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDYY 404
P+ L + +++ ARR+LGY+P Q L + + +Y+ +
Sbjct: 308 PLAVERLYLDNYFSIAKARRDLGYEPLFTTQQALTECLPYYVSLF 352
>ASPGD|ASPL0000035245 [details] [associations]
symbol:AN2951 species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=RCA] [GO:0005575
"cellular_component" evidence=ND] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
OMA:CEAILAD RefSeq:XP_660555.1 ProteinModelPortal:Q5B929
STRING:Q5B929 EnsemblFungi:CADANIAT00010133 GeneID:2873905
KEGG:ani:AN2951.2 OrthoDB:EOG4B8NNF Uniprot:Q5B929
Length = 428
Score = 93 (37.8 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 29/100 (29%), Positives = 47/100 (47%)
Query: 147 KFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWASSSSVYGL- 205
K S V+H AA V ++KNP+ Y +N++G ++ + I++SS++VYG
Sbjct: 140 KISGVIHFAAYKAVEESIKNPLKYYANNVSGLIDFASTLGKYGIK-TFIFSSSATVYGTL 198
Query: 206 -NKKIPFSE-----KDRTDQPSSLYAATKKAGEE-IAHTY 238
+P E KD + A T +AG I + Y
Sbjct: 199 ATSGLPLKEELCAHKDEIYHDADGVAQTIRAGSTGITNPY 238
Score = 75 (31.5 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKR 115
+LVTG GF+G+H + L + VV +DN ++ + + R
Sbjct: 49 ILVTGGLGFIGSHTTLELLKASYNVVVIDNLSNSFQSVFDR 89
Score = 68 (29.0 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 26/102 (25%), Positives = 39/102 (38%)
Query: 288 TVARDFTYIDDIVKGCLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXX 347
T RDF ++ D+ +G +AALD R FNLG V ++V
Sbjct: 317 TAVRDFIHVTDLARGHIAALDAANERKLAE-------NFRAFNLGTGRGHSVKEVVDAME 369
Query: 348 XXXXXXXXXXXXPMPANGDVLFTHANVSLARRELGYKPTTNL 389
P GDV A + +++EL +K +L
Sbjct: 370 SVSRKQIPVRAAPRRP-GDVGSCVAVATRSQQELRWKTEKSL 410
>MGI|MGI:96233 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 1" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=ISO]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96233 GO:GO:0016021 GO:GO:0005739
CTD:3283 eggNOG:COG0451 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 EMBL:M58567
EMBL:BC052659 IPI:IPI00229070 PIR:I49762 RefSeq:NP_032319.1
UniGene:Mm.140811 ProteinModelPortal:P24815 SMR:P24815
STRING:P24815 PhosphoSite:P24815 PaxDb:P24815 PRIDE:P24815
Ensembl:ENSMUST00000107016 GeneID:15492 KEGG:mmu:15492
InParanoid:P24815 OMA:MAGWSCL SABIO-RK:P24815 NextBio:288366
Bgee:P24815 Genevestigator:P24815 GermOnline:ENSMUSG00000027871
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 Uniprot:P24815
Length = 373
Score = 137 (53.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 65/222 (29%), Positives = 98/222 (44%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG 131
G LVTGA GFVG + L + + + + + + K + L + V V+EG
Sbjct: 3 GWSCLVTGAGGFVGQRIIKMLVQEKE-LQEVRALDKVFRPETKEEFSKLQTKTKVTVLEG 61
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
DI D+ L + + S V+H AA V + + ++ N+ G NLLEAC A+
Sbjct: 62 DILDAQCLRRACQGI--SVVIHTAAVIDVTGVIPR-QTILDVNLKGTQNLLEACVQASV- 117
Query: 192 PAIIWASSSSVYGLN--KKIPFS---EKDRTDQPSSLYAATKKAGEEIAHTYNHIY---G 243
PA I+ SS V G N KKI + E++ S Y +KK E+ N G
Sbjct: 118 PAFIFCSSVDVAGPNSYKKIVLNGHEEQNHESTWSDPYPYSKKMAEKAVLAANGSMLKNG 177
Query: 244 --LSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEG 283
L+ LR +YG R ++ + LK K ++ G
Sbjct: 178 GTLNTCALRPMYIYGE--RSPFIFNAIIR-ALKNKGILCVTG 216
Score = 52 (23.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 377 ARRELGYKPTTNLQTGLKKFVRW 399
A+R+LGY+P N + +K W
Sbjct: 334 AQRDLGYEPLVNWEEAKQKTSEW 356
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 139 (54.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 51/184 (27%), Positives = 83/184 (45%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLER------AGVFVV 129
L+TG +G G++++ L +G V G+ + ++T GR L R +F+
Sbjct: 5 LITGISGQDGSYLAELLLGKGYEVHGVIRRSSSFNT----GRIDHLYRDPHEPDVRLFLH 60
Query: 130 EGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTAN 189
GD+ND+ + ++ V+ + +L AQ+ VR + P + G V LLE +
Sbjct: 61 YGDLNDASSINRVLREVRPDEIYNLGAQSHVRVSFDVPEYTGEIDALGTVRLLEGIRETG 120
Query: 190 PQPAIIWASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-SIT 247
ASSS +YG K + +K+ T P S YA K I Y YG+ +
Sbjct: 121 LNTRFYQASSSELYG--KVVETPQKETTPFYPRSPYACAKAYAYYITVNYRESYGMYACN 178
Query: 248 GLRF 251
G+ F
Sbjct: 179 GILF 182
Score = 48 (22.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 362 PANGDVLFTHANVSLARRELGYKPTTNLQTGL 393
PA D+L + + ARR+LG++P + Q GL
Sbjct: 301 PAEVDLLL--GDPAKARRQLGWQPRVDFQ-GL 329
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 143 (55.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 57/242 (23%), Positives = 93/242 (38%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGD--GVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGD 132
V++TG GF+G++ + V +D DT + S+ +V D
Sbjct: 8 VVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDT--QNVAESVRNSPRYKLVLTD 65
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
I + + +F + V+H AA V +N+ F+ LE +T
Sbjct: 66 IKNEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKIK 125
Query: 193 AIIWASSSSVYGLNKKIPFSEKDRTD----QPSSLYAATKKAGEEIAHTYNHIYGLSITG 248
+ S+ VYG + + +E+ + + P + YAATK AGE Y Y L I
Sbjct: 126 RFVHISTDEVYG-DSDLSENEQGKVEFSRLVPGNPYAATKIAGEAYVRAYQTQYNLPIVT 184
Query: 249 LRFFTVYGP--WGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAA 306
R +YGP W + F I K + +G R + ++DD G A
Sbjct: 185 ARMNNIYGPNQWDVKVVPRFI---EIAKVRGEYTIQGSGKQL--RSWLFVDDASAGLKAV 239
Query: 307 LD 308
+
Sbjct: 240 CE 241
Score = 51 (23.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 373 NVSLARRELGYKPTTNLQTGLKKFV 397
++ A+ +LG++PTT+ G++ V
Sbjct: 299 SIEKAKNDLGWEPTTSFDDGMRHTV 323
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 131 (51.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 43/161 (26%), Positives = 67/161 (41%)
Query: 151 VMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWASSSSVYG--LNKK 208
V+HLA Q V A ++P + N+ G +NLL+A K ++ SS VYG
Sbjct: 57 VIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFSGTFLYISSGDVYGQVAEAA 116
Query: 209 IPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMVYFFF 268
+P E + P + YA +K A E + + G + R F GP + V
Sbjct: 117 LPIHE-ELIPHPRNPYAVSKLAAESLCLQWGITEGWRVLVARPFNHIGPGQKDSFVIASA 175
Query: 269 TKNILKRKPVMIFEG--PNHATVARDFTYIDDIVKGCLAAL 307
+ I + K + V+RDF + D++ L L
Sbjct: 176 ARQIARMKQGLQANRLEVGDIDVSRDFLDVQDVLSAYLRLL 216
Score = 52 (23.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 75 VLVTGAAGFVGTHVSAAL 92
+ VTG +GFVG H+ A L
Sbjct: 5 LFVTGLSGFVGKHLQAYL 22
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 144 (55.7 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 69/222 (31%), Positives = 106/222 (47%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIND 135
L+TG GF G +V+ LRR G + G + A E AG F V DI D
Sbjct: 11 LITGLEGFTGRYVADELRRSGYEIFGT-----------RHSGADERE-AGCFRV--DICD 56
Query: 136 SLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP-AI 194
L ++ V+ V+HLAA + V + + + Y +N+ G NLLEA + P A+
Sbjct: 57 LAALRRVVEEVEPEVVVHLAAISFVAHGEADAI-Y-RANVVGTRNLLEALAGLSRTPRAV 114
Query: 195 IWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTV 254
+ ASS++VYG N + ++ + P++ YA +K A E +A + H L I R F
Sbjct: 115 LLASSANVYG-NAPVELIDESVSLAPANDYAVSKLAMEYMARLWMH--RLPIVIARPFNY 171
Query: 255 YGPWGRPDMVYFFFTKNI--LKRKPVMIFEGPNHATVARDFT 294
G G+ +F K + +R+ +I G + V RDF+
Sbjct: 172 TGV-GQAS--HFLIPKIVSHFQRRASVIELG--NLDVERDFS 208
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 136 (52.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 62/237 (26%), Positives = 104/237 (43%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS-LKRGRASLLERAGVFVVE-G 131
+ L+TG G G++++ L +G V G+ + ++T + E F + G
Sbjct: 5 VALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLHYG 64
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTAN-- 189
D+ DS L ++ V+ V +L AQ+ V + ++P + + G + LLEA +
Sbjct: 65 DLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIRFLGLT 124
Query: 190 PQPAIIWASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-SIT 247
+ AS+S +YGL ++IP +K+ T P S YA K I Y YG+ +
Sbjct: 125 KKTKFYQASTSELYGLVQEIP--QKETTPFYPRSPYAVAKMYAYWITINYRESYGIYACN 182
Query: 248 GLRFFTVYGPWGRPDMVYFFFTK---NILKRKPVMIFEGPNHATVARDFTYIDDIVK 301
G+ F P V T+ NI + +F G + RD+ + D VK
Sbjct: 183 GI-LFNHESPRRGETFVTRKITRGMANIAQGLEKCLFMG--NLDALRDWGHAKDYVK 236
Score = 49 (22.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 362 PANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFV 397
PA + L + SLA++ELG+ P LQ + + V
Sbjct: 315 PAEVETLL--GDPSLAKKELGWVPEITLQQMVSEMV 348
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 136 (52.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 62/237 (26%), Positives = 104/237 (43%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS-LKRGRASLLERAGVFVVE-G 131
+ L+TG G G++++ L +G V G+ + ++T + E F + G
Sbjct: 5 VALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLHYG 64
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTAN-- 189
D+ DS L ++ V+ V +L AQ+ V + ++P + + G + LLEA +
Sbjct: 65 DLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIRFLGLT 124
Query: 190 PQPAIIWASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-SIT 247
+ AS+S +YGL ++IP +K+ T P S YA K I Y YG+ +
Sbjct: 125 KKTKFYQASTSELYGLVQEIP--QKETTPFYPRSPYAVAKMYAYWITINYRESYGIYACN 182
Query: 248 GLRFFTVYGPWGRPDMVYFFFTK---NILKRKPVMIFEGPNHATVARDFTYIDDIVK 301
G+ F P V T+ NI + +F G + RD+ + D VK
Sbjct: 183 GI-LFNHESPRRGETFVTRKITRGMANIAQGLEKCLFMG--NLDALRDWGHAKDYVK 236
Score = 49 (22.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 362 PANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFV 397
PA + L + SLA++ELG+ P LQ + + V
Sbjct: 315 PAEVETLL--GDPSLAKKELGWVPEITLQQMVSEMV 348
>WB|WBGene00022498 [details] [associations]
symbol:hsd-2 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
HOGENOM:HOG000266975 EMBL:FO081655 PIR:T30003 RefSeq:NP_508851.1
ProteinModelPortal:Q23086 SMR:Q23086 EnsemblMetazoa:ZC8.1
GeneID:191049 KEGG:cel:CELE_ZC8.1 CTD:191049 WormBase:ZC8.1
InParanoid:Q23086 OMA:FERANIT NextBio:947784 Uniprot:Q23086
Length = 374
Score = 131 (51.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 50/192 (26%), Positives = 88/192 (45%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRG--DGVVGLDNFNDYYDTSLKRGRASLLERAGVFVV 129
GH V+V G GF+G HV +AL++ G + ++ +D + T +K ++++ + +
Sbjct: 2 GHYVIV-GGGGFLGAHVISALQKIGCKERIIVVDPCPQEFKT-IK------IDKSNISYI 53
Query: 130 EGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTAN 189
+ D +LE + N S V+HLAA + S N N+ G L++ CK
Sbjct: 54 KASFLDDKVLENILNGA--SAVVHLAAVGHTGLIAGDRKSVHNFNVNGTKQLIKQCKALG 111
Query: 190 PQPAIIWASSSSVYGLNKKIP-FSEKDRTDQPSS---LYAATKKAGEEIAHTYNHIYGLS 245
+ ++ASS +V + + + +E D P Y+A+K E + +
Sbjct: 112 VK-RFLYASSVAVSFIGEPLDNVTEDDPLPDPKKYLDFYSASKAEAETYVLSQS-TPDFK 169
Query: 246 ITGLRFFTVYGP 257
LRF +YGP
Sbjct: 170 TVCLRFRGIYGP 181
Score = 54 (24.1 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 373 NVSLARRELGYKPTTNLQTGLKKF 396
++ ARRELGY+P + T + K+
Sbjct: 313 SIERARRELGYEPEPCVMTDVAKY 336
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 112 (44.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 75 VLVTGAAGFVGTHVSA-ALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+LVTG AGF+G+ V + D VV +D Y +L+ A + + DI
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT--YAGNLE-SLAEISDSERYSFENADI 59
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACK 186
D+ F + VMHLAA++ V ++ P +++ +NI G LLEA +
Sbjct: 60 CDAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
Score = 74 (31.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 379 RELGYKPTTNLQTGLKKFVRWYL 401
RELG+KP ++G++K V WYL
Sbjct: 313 RELGWKPQETFESGIRKTVEWYL 335
>UNIPROTKB|B5XE59 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:8030
"Salmo salar" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
EMBL:BT049328 RefSeq:NP_001134845.1 UniGene:Ssa.6439
ProteinModelPortal:B5XE59 GeneID:100196344 Uniprot:B5XE59
Length = 370
Score = 141 (54.7 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 51/186 (27%), Positives = 90/186 (48%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGL----DNFNDYYDTSLKRGRASLLERAGVFVV 129
+ ++TG G G++++ L +G V G+ +FN L + + E + +
Sbjct: 23 VAVITGITGQDGSYLAEFLLEKGYEVHGILRRSSSFNTGRIEHLYQNPQTHTE-GNMKLH 81
Query: 130 EGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTAN 189
GD+ DS L K+ N VK + + +L AQ+ V+ + + N + G + LL+A KT
Sbjct: 82 YGDLTDSTCLVKIINQVKPTEIYNLGAQSHVKISFELAEYTANVDGVGTLRLLDAIKTCG 141
Query: 190 PQPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-S 245
++ + AS+S +YG ++IP +K+ T P S Y A K I + Y L +
Sbjct: 142 LTNSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFA 199
Query: 246 ITGLRF 251
+ G+ F
Sbjct: 200 VNGILF 205
>UNIPROTKB|Q6P621 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
OrthoDB:EOG4FXR7M EMBL:AAMC01033108 EMBL:AAMC01033109
EMBL:AAMC01033110 EMBL:AAMC01033111 EMBL:AAMC01033112
EMBL:AAMC01033113 EMBL:AAMC01033114 EMBL:AAMC01033115
EMBL:AAMC01033116 EMBL:AAMC01033117 EMBL:AAMC01033118
EMBL:AAMC01033119 EMBL:AAMC01033120 EMBL:AAMC01033121
EMBL:AAMC01033122 EMBL:AAMC01033123 EMBL:AAMC01033124
EMBL:AAMC01033125 EMBL:AAMC01033126 EMBL:AAMC01033127
EMBL:AAMC01033128 EMBL:AAMC01033129 EMBL:AAMC01033130
EMBL:AAMC01033131 EMBL:AAMC01033132 EMBL:BC062513 UniGene:Str.7169
ProteinModelPortal:Q6P621 STRING:Q6P621 Ensembl:ENSXETT00000001321
Xenbase:XB-GENE-943015 InParanoid:Q6P621 Bgee:Q6P621 Uniprot:Q6P621
Length = 383
Score = 141 (54.7 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 63/250 (25%), Positives = 114/250 (45%)
Query: 63 SSRPRSRAGGH--IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS----LKRG 116
S P + AG + L+TG G G++++ L +G V G+ + ++T L +
Sbjct: 23 SGSPSNGAGKSRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN 82
Query: 117 RASLLERAGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIA 176
+ +E + + GD+ DS L K+ N VK + + +L AQ+ V+ + + +
Sbjct: 83 PHAHIE-GNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGL 141
Query: 177 GFVNLLEACKTANPQPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEE 233
G + LL+A KT ++ + AS+S +YG ++IP +K+ T P S Y A K
Sbjct: 142 GTLRLLDATKTCGLINSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYW 199
Query: 234 IAHTYNHIYGL-SITGLRFFTVYGPWGRPDMVYFFFTKNILK-RKPVMIFEGPNHATVAR 291
I + Y L ++ G+ F P + V ++++ K M F + R
Sbjct: 200 IVVNFREAYNLFAVNGI-LFNHESPRRGANFVTRKISRSVAKIHLGQMEFVSLGNLDAKR 258
Query: 292 DFTYIDDIVK 301
D+ + D V+
Sbjct: 259 DWGHAKDYVE 268
Score = 39 (18.8 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 366 DVLFTHANVSLARRELGYKPTTNLQTGLKKFV 397
+V F + S A+ +LG+ P + +K+ V
Sbjct: 339 EVEFLQGDCSKAKNKLGWIPKVSFNELVKEMV 370
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 142 (55.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 51/186 (27%), Positives = 88/186 (47%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS-LKR--GRASLLERAGVFVVE 130
+ L+TG G G++++ L +G V G+ + ++T+ ++ G + F +
Sbjct: 35 VALITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYGNPVTHNGSASFSLH 94
Query: 131 -GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEA---CK 186
GD+ DS L KL + ++ + + HLAAQ+ V+ + P + G + LL+A C+
Sbjct: 95 YGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACR 154
Query: 187 TANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGL-S 245
+ AS+S +YG ++IP SE P S YA K G I Y Y + +
Sbjct: 155 LTE-KVRFYQASTSELYGKVQEIPQSELTPF-YPRSPYAVAKMYGYWIVVNYREAYKMFA 212
Query: 246 ITGLRF 251
G+ F
Sbjct: 213 CNGILF 218
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 373 NVSLARRELGYKPTTNLQTGLKKFV 397
N + AR+ LG++P + +K+ V
Sbjct: 345 NPAKARKTLGWEPKITVPELVKEMV 369
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 142 (55.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 51/186 (27%), Positives = 88/186 (47%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS-LKR--GRASLLERAGVFVVE 130
+ L+TG G G++++ L +G V G+ + ++T+ ++ G + F +
Sbjct: 35 VALITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYGNPVTHNGSASFSLH 94
Query: 131 -GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEA---CK 186
GD+ DS L KL + ++ + + HLAAQ+ V+ + P + G + LL+A C+
Sbjct: 95 YGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACR 154
Query: 187 TANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGL-S 245
+ AS+S +YG ++IP SE P S YA K G I Y Y + +
Sbjct: 155 LTE-KVRFYQASTSELYGKVQEIPQSELTPF-YPRSPYAVAKMYGYWIVVNYREAYKMFA 212
Query: 246 ITGLRF 251
G+ F
Sbjct: 213 CNGILF 218
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 373 NVSLARRELGYKPTTNLQTGLKKFV 397
N + AR+ LG++P + +K+ V
Sbjct: 345 NPAKARKTLGWEPKITVPELVKEMV 369
>FB|FBgn0031661 [details] [associations]
symbol:Gmd "GDP-mannose 4,6-dehydratase" species:7227
"Drosophila melanogaster" [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=ISS;IDA] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=IMP] [GO:2000035 "regulation of
stem cell division" evidence=IMP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:AE014134 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0007219 GO:GO:0005622 GO:GO:2000035
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
GO:GO:0042350 CTD:33716 EMBL:AM231687 EMBL:AY089519
RefSeq:NP_608888.2 UniGene:Dm.4967 ProteinModelPortal:Q9VMW9
SMR:Q9VMW9 STRING:Q9VMW9 PaxDb:Q9VMW9 EnsemblMetazoa:FBtr0079049
GeneID:33716 KEGG:dme:Dmel_CG8890 FlyBase:FBgn0031661
InParanoid:Q9VMW9 OrthoDB:EOG40K6FB PhylomeDB:Q9VMW9
GenomeRNAi:33716 NextBio:784930 Bgee:Q9VMW9 GermOnline:CG8890
Uniprot:Q9VMW9
Length = 395
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 59/237 (24%), Positives = 110/237 (46%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS-LKRGRAS-LLERAGVFVVE- 130
+ L+TG G G++++ L ++ V G+ ++T+ ++ A + G +
Sbjct: 48 VALITGITGQDGSYLAEFLLKKDYEVHGIIRRASTFNTTRIEHLYADPKAHKGGRMKLHY 107
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
GD+ DS L K+ N+VK + + +LAAQ+ V+ + + G + +L+A +T
Sbjct: 108 GDMTDSSSLVKIINMVKPTEIYNLAAQSHVKVSFDLSEYTAEVDAVGTLRILDAIRTCGM 167
Query: 191 QPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-SI 246
+ + + AS+S +YG K + + ++T P S YA K G I Y Y + +
Sbjct: 168 EKNVRFYQASTSELYG--KVVETPQNEQTPFYPRSPYACAKMYGFWIVINYREAYNMYAC 225
Query: 247 TGLRFFTVYGPWGRPDMVYFFFTKNILK--RKPVMIFEGPNHATVARDFTYIDDIVK 301
G+ F P + V T+++ K K + FE N + RD+ + D V+
Sbjct: 226 NGI-LFNHESPRRGENFVTRKITRSVAKIYHKQMEYFELGNLDS-KRDWGHASDYVE 280
>RGD|1308676 [details] [associations]
symbol:Hsd3b2 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;ISO;IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISO;IDA] [GO:0005496 "steroid binding"
evidence=IPI] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006082 "organic
acid metabolic process" evidence=IEP] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISO] [GO:0006701 "progesterone
biosynthetic process" evidence=IEP;IDA] [GO:0006703 "estrogen
biosynthetic process" evidence=IEP] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0008207 "C21-steroid hormone metabolic
process" evidence=IDA] [GO:0008584 "male gonad development"
evidence=IEP] [GO:0008585 "female gonad development" evidence=IEP]
[GO:0009635 "response to herbicide" evidence=IEP] [GO:0010033
"response to organic substance" evidence=IEP] [GO:0010038 "response
to metal ion" evidence=IEP] [GO:0010226 "response to lithium ion"
evidence=IEP] [GO:0010288 "response to lead ion" evidence=IEP]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0014823 "response to activity" evidence=IEP] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016101 "diterpenoid
metabolic process" evidence=IEP] [GO:0017143 "insecticide metabolic
process" evidence=IEP] [GO:0018879 "biphenyl metabolic process"
evidence=IEP] [GO:0018894 "dibenzo-p-dioxin metabolic process"
evidence=IEP] [GO:0018958 "phenol-containing compound metabolic
process" evidence=IEP] [GO:0018970 "toluene metabolic process"
evidence=IEP] [GO:0021766 "hippocampus development" evidence=IEP]
[GO:0030061 "mitochondrial crista" evidence=IDA] [GO:0030325
"adrenal gland development" evidence=IEP] [GO:0030728 "ovulation"
evidence=IEP] [GO:0030851 "granulocyte differentiation"
evidence=IEP] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032355 "response to estradiol stimulus"
evidence=IEP] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEP] [GO:0033197 "response to vitamin E" evidence=IEP]
[GO:0033327 "Leydig cell differentiation" evidence=IEP] [GO:0033591
"response to L-ascorbic acid" evidence=IEP] [GO:0035410
"dihydrotestosterone 17-beta-dehydrogenase activity" evidence=IDA]
[GO:0042493 "response to drug" evidence=IEP] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0043279 "response to alkaloid" evidence=IEP] [GO:0044344
"cellular response to fibroblast growth factor stimulus"
evidence=IEP] [GO:0045471 "response to ethanol" evidence=IEP]
[GO:0046470 "phosphatidylcholine metabolic process" evidence=IEP]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0050756 "fractalkine metabolic process" evidence=IEP]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] [GO:0051592 "response to
calcium ion" evidence=IEP] [GO:0060135 "maternal process involved
in female pregnancy" evidence=IEP] [GO:0060992 "response to
fungicide" evidence=IEP] [GO:0061370 "testosterone biosynthetic
process" evidence=IEP] [GO:0070301 "cellular response to hydrogen
peroxide" evidence=IEP] [GO:0070542 "response to fatty acid"
evidence=IEP] [GO:0071236 "cellular response to antibiotic"
evidence=IEP] [GO:0071288 "cellular response to mercury ion"
evidence=IEP] [GO:0071320 "cellular response to cAMP" evidence=IEP]
[GO:0071333 "cellular response to glucose stimulus" evidence=IEP]
[GO:0071371 "cellular response to gonadotropin stimulus"
evidence=IEP] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IEP] [GO:0071373
"cellular response to luteinizing hormone stimulus" evidence=IEP]
[GO:0071406 "cellular response to methylmercury" evidence=IEP]
[GO:0071549 "cellular response to dexamethasone stimulus"
evidence=IEP] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=IEP] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 RGD:1308676 GO:GO:0016021
GO:GO:0046686 GO:GO:0021766 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0004769 GO:GO:0006703 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:M38178 EMBL:BC086578 EMBL:DQ515797 IPI:IPI00362470 PIR:A39051
RefSeq:NP_001007720.3 UniGene:Rn.128814 ProteinModelPortal:P22071
STRING:P22071 Ensembl:ENSRNOT00000026325 GeneID:360348
KEGG:rno:360348 UCSC:RGD:1308676 InParanoid:P22071 OMA:WVFPRIA
BRENDA:5.3.3.1 NextBio:672781 ArrayExpress:P22071
Genevestigator:P22071 GermOnline:ENSRNOG00000019454 GO:GO:0030061
GO:GO:0035410 GO:GO:0051287 GO:GO:0005496 GO:GO:0030325
GO:GO:0018879 GO:GO:0071236 GO:GO:0071320 GO:GO:0071549
GO:GO:0044344 GO:GO:0071372 GO:GO:0071333 GO:GO:0070301
GO:GO:0032869 GO:GO:0071373 GO:GO:0071288 GO:GO:0071406
GO:GO:0071560 GO:GO:0018894 GO:GO:0016101 GO:GO:0008585
GO:GO:0050756 GO:GO:0030851 GO:GO:0017143 GO:GO:0033327
GO:GO:0060135 GO:GO:0006082 GO:GO:0030728 GO:GO:0018958
GO:GO:0046470 GO:GO:0006701 GO:GO:0014823 GO:GO:0043279
GO:GO:0046685 GO:GO:0051592 GO:GO:0051412 GO:GO:0042493
GO:GO:0032355 GO:GO:0045471 GO:GO:0070542 GO:GO:0060992
GO:GO:0009635 GO:GO:0033591 GO:GO:0010288 GO:GO:0010226
GO:GO:0033197 GO:GO:0061370 GO:GO:0018970 Uniprot:P22071
Length = 373
Score = 135 (52.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 50/167 (29%), Positives = 82/167 (49%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG 131
G LVTGA GFVG + L + + + + + + K + L +A V ++EG
Sbjct: 3 GWSCLVTGAGGFVGQRIIRMLVQEKE-LQEVRALDKVFRPETKEEFSKLQTKAKVTMLEG 61
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
DI D+ L + + S V+H AA V + + + ++ N+ G N+LEAC A+
Sbjct: 62 DILDAQYLRRACQGI--SVVIHTAAVIDVSHVLPR-QTILDVNLKGTQNILEACVEASV- 117
Query: 192 PAIIWASSSSVYGLN--KKIPFS--EKDRTDQP-SSLYAATKKAGEE 233
PA I+ S+ V G N KKI + E++ + S Y +K+ E+
Sbjct: 118 PAFIYCSTVDVAGPNSYKKIILNGHEEEHHESTWSDAYPYSKRMAEK 164
Score = 44 (20.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 377 ARRELGYKPTTNLQTGLKKFVRW 399
A+R+LGY P + + +K W
Sbjct: 334 AQRDLGYVPLVSWEEAKQKTSEW 356
>UNIPROTKB|O60547 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IC]
[GO:0070401 "NADP+ binding" evidence=IDA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IGI;IDA] [GO:0019673
"GDP-mannose metabolic process" evidence=IGI;IDA] [GO:0007219
"Notch signaling pathway" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005737 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 EMBL:AL034344
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:IAYNLTD HOVERGEN:HBG000727 EMBL:AF042377
EMBL:CR541929 EMBL:CR541947 EMBL:AL033517 EMBL:AL035693
EMBL:AL137179 EMBL:AL158139 EMBL:BC000117 EMBL:AF040260
IPI:IPI00030207 RefSeq:NP_001240775.1 RefSeq:NP_001491.1
UniGene:Hs.144496 UniGene:Hs.660919 PDB:1T2A PDBsum:1T2A
ProteinModelPortal:O60547 SMR:O60547 IntAct:O60547 STRING:O60547
PhosphoSite:O60547 PaxDb:O60547 PeptideAtlas:O60547 PRIDE:O60547
DNASU:2762 Ensembl:ENST00000380815 GeneID:2762 KEGG:hsa:2762
UCSC:uc003mtq.3 CTD:2762 GeneCards:GC06M001624 HGNC:HGNC:4369
HPA:HPA031528 MIM:602884 neXtProt:NX_O60547 PharmGKB:PA28754
InParanoid:O60547 OrthoDB:EOG4FXR7M PhylomeDB:O60547 ChiTaRS:GMDS
EvolutionaryTrace:O60547 GenomeRNAi:2762 NextBio:10866
ArrayExpress:O60547 Bgee:O60547 CleanEx:HS_GMDS
Genevestigator:O60547 GermOnline:ENSG00000112699 Uniprot:O60547
Length = 372
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/187 (26%), Positives = 92/187 (49%)
Query: 73 HIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS----LKRGRASLLERAGVFV 128
++ L+TG G G++++ L +G V G+ + ++T L + + +E + +
Sbjct: 24 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKL 82
Query: 129 VEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTA 188
GD+ DS L K+ N VK + + +L AQ+ V+ + + + G + LL+A KT
Sbjct: 83 HYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC 142
Query: 189 NPQPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL- 244
++ + AS+S +YG ++IP +K+ T P S Y A K I + Y L
Sbjct: 143 GLINSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLF 200
Query: 245 SITGLRF 251
++ G+ F
Sbjct: 201 AVNGILF 207
>UNIPROTKB|F6W0W9 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase isoform 1"
species:9544 "Macaca mulatta" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:JU322217 EMBL:JV046790 RefSeq:NP_001253718.1
UniGene:Mmu.34300 Ensembl:ENSMMUT00000008111 GeneID:707051
KEGG:mcc:707051 NextBio:19971634 Uniprot:F6W0W9
Length = 372
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/187 (26%), Positives = 92/187 (49%)
Query: 73 HIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS----LKRGRASLLERAGVFV 128
++ L+TG G G++++ L +G V G+ + ++T L + + +E + +
Sbjct: 24 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKL 82
Query: 129 VEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTA 188
GD+ DS L K+ N VK + + +L AQ+ V+ + + + G + LL+A KT
Sbjct: 83 HYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC 142
Query: 189 NPQPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL- 244
++ + AS+S +YG ++IP +K+ T P S Y A K I + Y L
Sbjct: 143 GLINSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLF 200
Query: 245 SITGLRF 251
++ G+ F
Sbjct: 201 AVNGILF 207
>UNIPROTKB|F7EWI9 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD CTD:2762 EMBL:ACFV01112271 EMBL:ACFV01112272
EMBL:ACFV01112273 EMBL:ACFV01112274 EMBL:ACFV01112275
EMBL:ACFV01112276 EMBL:ACFV01112277 EMBL:ACFV01112278
EMBL:ACFV01112279 EMBL:ACFV01112280 EMBL:ACFV01112281
EMBL:ACFV01112282 EMBL:ACFV01112283 EMBL:ACFV01112284
EMBL:ACFV01112285 EMBL:ACFV01112286 EMBL:ACFV01112287
EMBL:ACFV01112288 EMBL:ACFV01112289 EMBL:ACFV01112290
EMBL:ACFV01112291 EMBL:ACFV01112292 EMBL:ACFV01112293
EMBL:ACFV01112294 EMBL:ACFV01112295 EMBL:ACFV01112296
EMBL:ACFV01112297 EMBL:ACFV01112298 EMBL:ACFV01112299
EMBL:ACFV01112300 EMBL:ACFV01112301 RefSeq:XP_002746325.1
ProteinModelPortal:F7EWI9 Ensembl:ENSCJAT00000038466
GeneID:100390839 Uniprot:F7EWI9
Length = 372
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/187 (26%), Positives = 92/187 (49%)
Query: 73 HIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS----LKRGRASLLERAGVFV 128
++ L+TG G G++++ L +G V G+ + ++T L + + +E + +
Sbjct: 24 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKL 82
Query: 129 VEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTA 188
GD+ DS L K+ N VK + + +L AQ+ V+ + + + G + LL+A KT
Sbjct: 83 HYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC 142
Query: 189 NPQPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL- 244
++ + AS+S +YG ++IP +K+ T P S Y A K I + Y L
Sbjct: 143 GLINSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLF 200
Query: 245 SITGLRF 251
++ G+ F
Sbjct: 201 AVNGILF 207
>MGI|MGI:109598 [details] [associations]
symbol:Hsd3b6 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 6" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006700 "C21-steroid
hormone biosynthetic process" evidence=ISO] [GO:0006702 "androgen
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0034757 "negative regulation of iron ion transport"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:109598 GO:GO:0016021
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
BRENDA:5.3.3.1 EMBL:AL606755 GeneTree:ENSGT00550000074557 CTD:15497
EMBL:AF031170 EMBL:AK142267 EMBL:CH466620 IPI:IPI00420666
RefSeq:NP_038849.2 UniGene:Mm.14435 ProteinModelPortal:O35469
SMR:O35469 STRING:O35469 PRIDE:O35469 Ensembl:ENSMUST00000029463
Ensembl:ENSMUST00000170847 GeneID:15497 KEGG:mmu:15497
InParanoid:Q3UQN7 OMA:FIHISST NextBio:288386 Bgee:O35469
Genevestigator:O35469 GermOnline:ENSMUSG00000027869 Uniprot:O35469
Length = 373
Score = 132 (51.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 65/215 (30%), Positives = 98/215 (45%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG 131
G LVTGA GF+G + L + D + + + ++ + +L V V+EG
Sbjct: 3 GWSCLVTGAGGFLGQRIVQLLMQEKD-LEEIRVLDKFFRPETREQFFNLDTNIKVTVLEG 61
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
DI D+ L K + S V+H AA V + + ++ N+ G NLLEAC A+
Sbjct: 62 DILDTQYLRKACQGI--SVVIHTAAVIDVTGVIPR-QTILDVNLKGTQNLLEACIQASV- 117
Query: 192 PAIIWASSSSVYGLN--KKIPFS--EKDRTDQP-SSLYAATKKAGEEIAHTYN----HIY 242
PA I++SS V G N K+I + E++ + S Y +KK E+ N I
Sbjct: 118 PAFIFSSSVDVAGPNSYKEIILNGNEEEHHESIWSDPYPYSKKMAEKAVLAANGSMLKIG 177
Query: 243 G-LSITGLRFFTVYG---PWGRPDMVYFFFTKNIL 273
G L LR +YG P+ ++ KNIL
Sbjct: 178 GTLHTCALRPMYIYGERSPFISNTIITALKNKNIL 212
Score = 47 (21.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 377 ARRELGYKPTTNLQTGLKKFVRW 399
A+R+LGY+P + + +K W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|F6Z8R0 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
Ensembl:ENSMODT00000010461 Uniprot:F6Z8R0
Length = 347
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 50/186 (26%), Positives = 91/186 (48%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS----LKRGRASLLERAGVFVV 129
+ L+TG G G++++ L +G V G+ + ++T L + + +E + +
Sbjct: 25 VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLH 83
Query: 130 EGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTAN 189
GD+ DS L K+ N VK + + +L AQ+ V+ + + + G + LL+A KT
Sbjct: 84 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCG 143
Query: 190 PQPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-S 245
++ + AS+S +YG ++IP +K+ T P S Y A K I + Y L +
Sbjct: 144 LINSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFA 201
Query: 246 ITGLRF 251
+ G+ F
Sbjct: 202 VNGILF 207
>UNIPROTKB|Q8K3X3 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:10029
"Cricetulus griseus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
GO:GO:0019673 GO:GO:0042351 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AF525364 RefSeq:NP_001233625.1 ProteinModelPortal:Q8K3X3
SMR:Q8K3X3 GeneID:100689436 CTD:33716 HOVERGEN:HBG000727
Uniprot:Q8K3X3
Length = 372
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 50/186 (26%), Positives = 91/186 (48%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS----LKRGRASLLERAGVFVV 129
+ L+TG G G++++ L +G V G+ + ++T L + + +E + +
Sbjct: 25 VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLH 83
Query: 130 EGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTAN 189
GD+ DS L K+ N VK + + +L AQ+ V+ + + + G + LL+A KT
Sbjct: 84 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCG 143
Query: 190 PQPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-S 245
++ + AS+S +YG ++IP +K+ T P S Y A K I + Y L +
Sbjct: 144 LINSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFA 201
Query: 246 ITGLRF 251
+ G+ F
Sbjct: 202 VNGILF 207
>MGI|MGI:1891112 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=ISO] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0070401 "NADP+ binding" evidence=ISO] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 MGI:MGI:1891112 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
HOVERGEN:HBG000727 CTD:2762 OrthoDB:EOG4FXR7M EMBL:AL645643
EMBL:AL645664 EMBL:AL645697 EMBL:AL645783 EMBL:AL645763
EMBL:BC031788 EMBL:BC093502 IPI:IPI00169546 RefSeq:NP_666153.1
UniGene:Mm.247143 ProteinModelPortal:Q8K0C9 SMR:Q8K0C9
STRING:Q8K0C9 PhosphoSite:Q8K0C9 PaxDb:Q8K0C9 PRIDE:Q8K0C9
Ensembl:ENSMUST00000041859 GeneID:218138 KEGG:mmu:218138
UCSC:uc007pzq.1 InParanoid:Q8K0C9 NextBio:376160 Bgee:Q8K0C9
CleanEx:MM_GMDS Genevestigator:Q8K0C9 GermOnline:ENSMUSG00000038372
Uniprot:Q8K0C9
Length = 372
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 50/186 (26%), Positives = 91/186 (48%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS----LKRGRASLLERAGVFVV 129
+ L+TG G G++++ L +G V G+ + ++T L + + +E + +
Sbjct: 25 VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLH 83
Query: 130 EGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTAN 189
GD+ DS L K+ N VK + + +L AQ+ V+ + + + G + LL+A KT
Sbjct: 84 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCG 143
Query: 190 PQPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-S 245
++ + AS+S +YG ++IP +K+ T P S Y A K I + Y L +
Sbjct: 144 LINSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFA 201
Query: 246 ITGLRF 251
+ G+ F
Sbjct: 202 VNGILF 207
>RGD|1311008 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISO;ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISO;ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISO;ISS]
[GO:0070401 "NADP+ binding" evidence=ISO;ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 RGD:1311008
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
EMBL:CH473977 GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
CTD:2762 OrthoDB:EOG4FXR7M EMBL:BC104708 IPI:IPI00362967
RefSeq:NP_001034695.1 UniGene:Rn.212995 SMR:Q3MHS7 STRING:Q3MHS7
Ensembl:ENSRNOT00000023691 GeneID:291095 KEGG:rno:291095
UCSC:RGD:1311008 InParanoid:Q3MHS7 NextBio:632111
Genevestigator:Q3MHS7 Uniprot:Q3MHS7
Length = 372
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 50/186 (26%), Positives = 91/186 (48%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS----LKRGRASLLERAGVFVV 129
+ L+TG G G++++ L +G V G+ + ++T L + + +E + +
Sbjct: 25 VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLH 83
Query: 130 EGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTAN 189
GD+ DS L K+ N VK + + +L AQ+ V+ + + + G + LL+A KT
Sbjct: 84 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCG 143
Query: 190 PQPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-S 245
++ + AS+S +YG ++IP +K+ T P S Y A K I + Y L +
Sbjct: 144 LINSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFA 201
Query: 246 ITGLRF 251
+ G+ F
Sbjct: 202 VNGILF 207
>WB|WBGene00022616 [details] [associations]
symbol:hsd-3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
EMBL:FO081547 RefSeq:NP_508852.3 ProteinModelPortal:A4UVJ7
EnsemblMetazoa:ZC449.6 GeneID:260026 KEGG:cel:CELE_ZC449.6
CTD:260026 WormBase:ZC449.6 HOGENOM:HOG000266975 InParanoid:A4UVJ7
OMA:IVVDPNP NextBio:952782 Uniprot:A4UVJ7
Length = 359
Score = 123 (48.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 53/193 (27%), Positives = 88/193 (45%)
Query: 73 HIVLVTGAAGFVGTHVSAALRRRGDGV--VGLDNFNDYYDTSLKRGRASLLERAGVFVVE 130
H V +TG GF+G H+ AAL++ GD + +D + L A +++ V +
Sbjct: 6 HYV-ITGGGGFLGAHLIAALQKNGDRTKCIVVDP-----NPRLSHFSAIDFDKSLVEYEK 59
Query: 131 GDINDSLLLEKLF-NLVKFSHVMHLAAQAGVRYAMKNPMSYVNS-NIAGFVNLLEACKTA 188
G D +LE++ N + H+ + G A K+ YV + N+ G L+E CK
Sbjct: 60 GSFLDRKVLERVLPNAITVFHLCAIG-HTGWFGAQKH-REYVYAFNVTGTKFLIEKCKFF 117
Query: 189 NPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSS----LYAATKKAGEEIAHTYNHIYGL 244
P I++SS +V + K I ++ S +Y+++K E + + I
Sbjct: 118 GV-PRFIYSSSIAVVFVGKPIYNCDESEPYPLKSEYLDIYSSSKAEAEAFVRSQSTIQ-F 175
Query: 245 SITGLRFFTVYGP 257
T LRF +YGP
Sbjct: 176 KTTCLRFRAIYGP 188
Score = 54 (24.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 366 DVLFTHANVSL--ARRELGYKPTTNL 389
+VL T S+ ARRELGY P NL
Sbjct: 325 EVLITDNTYSIEKARRELGYCPEQNL 350
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 60/232 (25%), Positives = 100/232 (43%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAG--VFVVEGDI 133
L+TG G G++++ L +G V GL ++TS + G +F+ GD+
Sbjct: 5 LITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGARLFLHYGDL 64
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
D L L + ++ V +LAAQ+ VR + P+ ++ G + LLEA + +
Sbjct: 65 IDGTRLVTLLSTIEPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSMRLLEAVRLSRVHCR 124
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-SITGLRF 251
ASSS ++G + P + + T P S Y A K Y YGL ++ G+
Sbjct: 125 FYQASSSEMFGAS---PPPQNELTPFYPRSPYGAAKVYSYWATRNYREAYGLFAVNGI-L 180
Query: 252 FTVYGPWGRPDMVYFFFTKNILKRKPVMIFEG-PNHATVARDFTYIDDIVKG 302
F P V T+ + + K + E + RD+ Y + V+G
Sbjct: 181 FNHESPRRGETFVTRKITRAVARIKAGIQSEVYMGNLDAVRDWGYAPEYVEG 232
>TAIR|locus:2155036 [details] [associations]
symbol:GMD1 ""GDP-D-mannose 4,6-dehydratase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA;ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AB022211 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 EMBL:AF195140
IPI:IPI00517362 RefSeq:NP_201429.1 UniGene:At.46822
ProteinModelPortal:Q9SNY3 SMR:Q9SNY3 IntAct:Q9SNY3 STRING:Q9SNY3
PaxDb:Q9SNY3 PRIDE:Q9SNY3 EnsemblPlants:AT5G66280.1 GeneID:836760
KEGG:ath:AT5G66280 TAIR:At5g66280 InParanoid:Q9SNY3
PhylomeDB:Q9SNY3 ProtClustDB:PLN02653 Genevestigator:Q9SNY3
GermOnline:AT5G66280 Uniprot:Q9SNY3
Length = 361
Score = 132 (51.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 57/189 (30%), Positives = 91/189 (48%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGL----DNFNDYYDTSLKRGRASLLERAGVFVV 129
I LVTG G G++++ L +G V GL NFN + ++ +A + +
Sbjct: 18 IALVTGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRLNHIYVDPHNV-NKALMKLH 76
Query: 130 EGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIA-GFVNLLEACKTA 188
GD++D+ L + +++K V +LAAQ+ V + + P Y +A G + LLEA ++
Sbjct: 77 YGDLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIP-DYTADVVATGALRLLEAVRSH 135
Query: 189 NPQP--AIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYG 243
N AI + A SS ++G P + + T P S YAA+K A Y YG
Sbjct: 136 NIDNGRAIKYYQAGSSEMFG---STPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYG 192
Query: 244 L-SITGLRF 251
L + G+ F
Sbjct: 193 LYACNGILF 201
Score = 43 (20.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWYLDYYSDSGKKSAV 413
+ S A+ LG+KP + G +K V+ +D + K+ V
Sbjct: 312 DASKAKEMLGWKP----KVGFEKLVKMMVDEDLELAKREKV 348
>UNIPROTKB|P14060 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006703 "estrogen biosynthetic process"
evidence=TAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=ISS] [GO:0006694 "steroid
biosynthetic process" evidence=ISS] [GO:0030868 "smooth endoplasmic
reticulum membrane" evidence=ISS] [GO:0005758 "mitochondrial
intermembrane space" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic
process" evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic
process" evidence=TAS] [GO:0008202 "steroid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 EMBL:M27137
EMBL:M28392 EMBL:M28162 EMBL:M28391 EMBL:X53321 EMBL:M35493
EMBL:M63397 EMBL:M63395 EMBL:M63396 EMBL:M38180 EMBL:X55997
EMBL:S45679 EMBL:AK291556 EMBL:BC031999 IPI:IPI00843838 PIR:A36551
RefSeq:NP_000853.1 UniGene:Hs.364941 ProteinModelPortal:P14060
SMR:P14060 STRING:P14060 PhosphoSite:P14060 DMDM:112767
PRIDE:P14060 DNASU:3283 Ensembl:ENST00000369413
Ensembl:ENST00000528909 GeneID:3283 KEGG:hsa:3283 UCSC:uc001ehv.1
CTD:3283 GeneCards:GC01P120049 H-InvDB:HIX0028579 HGNC:HGNC:5217
MIM:109715 neXtProt:NX_P14060 PharmGKB:PA29486 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 InParanoid:P14060 KO:K00070
OrthoDB:EOG4K3KWG PhylomeDB:P14060 BioCyc:MetaCyc:HS08829-MONOMER
BRENDA:1.1.1.145 Reactome:REACT_15493 SABIO-RK:P14060
BindingDB:P14060 ChEMBL:CHEMBL1958 DrugBank:DB00157
DrugBank:DB01108 GenomeRNAi:3283 NextBio:13031 ArrayExpress:P14060
Bgee:P14060 CleanEx:HS_HSD3B1 Genevestigator:P14060
GermOnline:ENSG00000203857 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006703 GO:GO:0006704 GO:GO:0006705
GO:GO:0044281 Gene3D:3.40.50.720 Uniprot:P14060
Length = 373
Score = 126 (49.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 55/199 (27%), Positives = 88/199 (44%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG 131
G LVTGA GF+G + L + + + + + + L+ + L + + V+EG
Sbjct: 3 GWSCLVTGAGGFLGQRIIRLLVKEKE-LKEIRVLDKAFGPELREEFSKLQNKTKLTVLEG 61
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
DI D L++ V S ++H A V + + + S +N N+ G LLEAC A+
Sbjct: 62 DILDEPFLKRACQDV--SVIIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 117
Query: 192 PAIIWASSSSVYGLNKKIPFSEKDRTDQP-----SSLYAATKKAGEEI---AHTYNHIYG 243
P I+ SS V G N + ++P + Y +KK E+ A+ +N G
Sbjct: 118 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLAANGWNLKNG 177
Query: 244 --LSITGLRFFTVYGPWGR 260
L LR +YG R
Sbjct: 178 GTLYTCALRPMYIYGEGSR 196
Score = 49 (22.3 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 377 ARRELGYKPTTNLQTGLKKFVRW 399
A+R+L YKP + + +K V W
Sbjct: 334 AQRDLAYKPLYSWEEAKQKTVEW 356
>UNIPROTKB|Q5TDG2 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
UniGene:Hs.364941 HGNC:HGNC:5217 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
OMA:MAGWSCL GO:GO:0006694 GO:GO:0016853 EMBL:AL121995
IPI:IPI00246994 ProteinModelPortal:Q5TDG2 SMR:Q5TDG2 STRING:Q5TDG2
PRIDE:Q5TDG2 Ensembl:ENST00000235547 ArrayExpress:Q5TDG2
Bgee:Q5TDG2 Uniprot:Q5TDG2
Length = 375
Score = 126 (49.4 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 55/199 (27%), Positives = 88/199 (44%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG 131
G LVTGA GF+G + L + + + + + + L+ + L + + V+EG
Sbjct: 5 GWSCLVTGAGGFLGQRIIRLLVKEKE-LKEIRVLDKAFGPELREEFSKLQNKTKLTVLEG 63
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
DI D L++ V S ++H A V + + + S +N N+ G LLEAC A+
Sbjct: 64 DILDEPFLKRACQDV--SVIIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 119
Query: 192 PAIIWASSSSVYGLNKKIPFSEKDRTDQP-----SSLYAATKKAGEEI---AHTYNHIYG 243
P I+ SS V G N + ++P + Y +KK E+ A+ +N G
Sbjct: 120 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLAANGWNLKNG 179
Query: 244 --LSITGLRFFTVYGPWGR 260
L LR +YG R
Sbjct: 180 GTLYTCALRPMYIYGEGSR 198
Score = 49 (22.3 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 377 ARRELGYKPTTNLQTGLKKFVRW 399
A+R+L YKP + + +K V W
Sbjct: 336 AQRDLAYKPLYSWEEAKQKTVEW 358
>UNIPROTKB|P67910 [details] [associations]
symbol:rfaD "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:83333 "Escherichia coli K-12" [GO:0097171
"ADP-L-glycero-beta-D-manno-heptose biosynthetic process"
evidence=IEA] [GO:0070401 "NADP+ binding" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008712 "ADP-glyceromanno-heptose
6-epimerase activity" evidence=IEA;IDA] [GO:0009244
"lipopolysaccharide core region biosynthetic process"
evidence=IEA;IMP] UniPathway:UPA00356 HAMAP:MF_01601
InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 GO:GO:0005829 GO:GO:0006950
GO:GO:0016020 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009244 GO:GO:0070401 GO:GO:0097171
EMBL:M33577 EMBL:X54492 PIR:JU0299 RefSeq:NP_418076.1
RefSeq:YP_491814.1 PDB:1EQ2 PDB:2X6T PDBsum:1EQ2 PDBsum:2X6T
ProteinModelPortal:P67910 SMR:P67910 DIP:DIP-35958N IntAct:P67910
SWISS-2DPAGE:P67910 PaxDb:P67910 PRIDE:P67910
EnsemblBacteria:EBESCT00000000716 EnsemblBacteria:EBESCT00000000717
EnsemblBacteria:EBESCT00000000718 EnsemblBacteria:EBESCT00000000719
EnsemblBacteria:EBESCT00000016472 GeneID:12934299 GeneID:948134
KEGG:ecj:Y75_p3555 KEGG:eco:b3619 PATRIC:32122725 EchoBASE:EB0831
EcoGene:EG10838 HOGENOM:HOG000167987 KO:K03274 OMA:AVNLWFW
ProtClustDB:PRK11150 BioCyc:EcoCyc:EG10838-MONOMER
BioCyc:ECOL316407:JW3594-MONOMER BioCyc:MetaCyc:EG10838-MONOMER
SABIO-RK:P67910 EvolutionaryTrace:P67910 Genevestigator:P67910
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
Uniprot:P67910
Length = 310
Score = 133 (51.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 78/341 (22%), Positives = 133/341 (39%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRG-DGVVGLDNFNDYYDTSLKRGRASLLE-RAGVFVVEG 131
+++VTG AGF+G+++ AL +G ++ +DN D T +L++ ++ +
Sbjct: 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD--GTKF----VNLVDLNIADYMDKE 54
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGV-----RYAMKNPMSYVNSNIAGFVNLLEACK 186
D ++ + F V+ + H A + +Y M N Y LL C
Sbjct: 55 DFLIQIMAGEEFGDVEA--IFHEGACSSTTEWDGKYMMDNNYQYSKE-------LLHYC- 104
Query: 187 TANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSI 246
+ ++ASS++ YG + F E ++P ++Y +K +E I
Sbjct: 105 -LEREIPFLYASSAATYG-GRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQI 162
Query: 247 TGLRFFTVYGPW----GRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKG 302
G R+F VYGP G V F + + +FEG + RDF Y+ D+
Sbjct: 163 VGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSEN--FKRDFVYVGDVADV 220
Query: 303 CLAALDXXXXXXXXXXXXXXXXQLRVFNLGNKSPEPVGKLVSXXXXXXXXXXXXXXXPMP 362
L L+ +FNLG E + V+ P P
Sbjct: 221 NLWFLENGVSG--------------IFNLGTGRAESF-QAVADATLAYHKKGQIEYIPFP 265
Query: 363 --ANGDV-LFTHANVSLARRELGY-KPTTNLQTGLKKFVRW 399
G FT A+++ R GY KP + G+ +++ W
Sbjct: 266 DKLKGRYQAFTQADLTNLRAA-GYDKPFKTVAEGVTEYMAW 305
>DICTYBASE|DDB_G0281487 [details] [associations]
symbol:DDB_G0281487 "3-beta-hydroxysteroid
dehydrogenase" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 dictyBase:DDB_G0281487 eggNOG:COG0451
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AAFI02000041 KO:K07748 RefSeq:XP_640712.1
ProteinModelPortal:Q54TU9 STRING:Q54TU9 PRIDE:Q54TU9
EnsemblProtists:DDB0233059 GeneID:8623099 KEGG:ddi:DDB_G0281487
InParanoid:Q54TU9 OMA:HIVWGPG ProtClustDB:CLSZ2729041
Uniprot:Q54TU9
Length = 349
Score = 91 (37.1 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 49/180 (27%), Positives = 76/180 (42%)
Query: 133 INDSLLLEKLFNLVK-FSHVMHLAAQA-GVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
I D E L + K + V H A+ G+ Y + Y + N+ G L+EAC
Sbjct: 48 IGDIRKTEDLESACKGITTVFHTASPTHGMGYDI-----YYSVNVIGTERLIEACIKCGV 102
Query: 191 QPAIIWASSSSVYGLNKKIPFSEKDR--TDQPSSLYAATKKAGEEIAHTYNHIYGLSITG 248
+ +++ SSSSV K I ++ D+ Y TK+ GE L +
Sbjct: 103 KQ-LVYTSSSSVVFNGKDIVNGDETLPYVDKHIDPYNKTKELGERAVLKAKGS-NLLVCA 160
Query: 249 LRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
LR ++GP R + F K + K +F N+ D+TYID++V + A D
Sbjct: 161 LRPAGIFGP--REVQGWPQFLKAAKEGKNKFMFGDGNNLC---DWTYIDNVVHAHILAAD 215
Score = 73 (30.8 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWYL 401
N+ A++EL YKP +L+ G++K W+L
Sbjct: 302 NIEKAKKELKYKPIVSLRDGMEKTKEWFL 330
Score = 49 (22.3 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 76 LVTGAAGFVGTHVSAALRRRGD 97
LV G GF+G ++ +L RG+
Sbjct: 6 LVVGGCGFLGRYIVESLLARGE 27
>UNIPROTKB|P72586 [details] [associations]
symbol:rfbD "GDP-D-mannose dehydratase" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:BA000022 GenomeReviews:BA000022_GR
GO:GO:0019673 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P32054 PIR:S74433
RefSeq:NP_439905.1 RefSeq:YP_005649960.1 ProteinModelPortal:P72586
SMR:P72586 IntAct:P72586 STRING:P72586 GeneID:12255298
GeneID:951882 KEGG:syn:sll1212 KEGG:syy:SYNGTS_0007 PATRIC:23836866
ProtClustDB:CLSK892430 Uniprot:P72586
Length = 362
Score = 134 (52.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 52/186 (27%), Positives = 86/186 (46%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS-LKRGRASLLE-RAGVFVVEG 131
+VL+TG G G+++S L +G V G+ ++T + + A + + G
Sbjct: 6 VVLLTGITGQDGSYLSELLLEKGYQVHGIIRRTSTFNTDRIDHLYVDPHDLEAKLRLHYG 65
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
D+ D L ++ VK + + +L AQ+ VR + +P V+S G + LLEA + +
Sbjct: 66 DLTDGTTLRRILEDVKPTEIYNLGAQSHVRVSFDSPEYTVDSVAMGTLRLLEAIRDYQHR 125
Query: 192 PAI----IWASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-S 245
I A SS ++G ++IP +K+ T P S YA K G Y Y L +
Sbjct: 126 TGIQVRFYQAGSSEMFGKVQEIP--QKETTPFYPRSPYACAKVYGHWQTVNYRESYDLFA 183
Query: 246 ITGLRF 251
G+ F
Sbjct: 184 CNGILF 189
>UNIPROTKB|Q8AVI1 [details] [associations]
symbol:gmds "Gmds-prov protein" species:8355 "Xenopus
laevis" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
HSSP:P32054 EMBL:BC042270 EMBL:BC111472 RefSeq:NP_001080352.1
UniGene:Xl.10260 SMR:Q8AVI1 GeneID:380044 KEGG:xla:380044
Xenbase:XB-GENE-943021 Uniprot:Q8AVI1
Length = 369
Score = 133 (51.9 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 53/197 (26%), Positives = 93/197 (47%)
Query: 63 SSRPRSRAGGHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS----LKRGRA 118
S +PR + L+TG G G++++ L +G V G+ + ++T L +
Sbjct: 16 SGKPRK-----VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPH 70
Query: 119 SLLERAGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGF 178
+ E + + GD+ DS L K+ N VK + + +L AQ+ V+ + + + G
Sbjct: 71 AHTE-GNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGLGT 129
Query: 179 VNLLEACKTANPQPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIA 235
+ LL+A KT + + AS+S +YG ++IP +K+ T P S Y A K I
Sbjct: 130 LRLLDATKTCGLINTVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIV 187
Query: 236 HTYNHIYGL-SITGLRF 251
+ Y L ++ G+ F
Sbjct: 188 VNFREAYNLFAVNGILF 204
Score = 40 (19.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 366 DVLFTHANVSLARRELGYKPTTNLQTGLKKFV 397
+V F + S A+ +LG+ P + +K+ V
Sbjct: 325 EVDFLQGDCSQAKNKLGWTPKVSFDELVKEMV 356
>UNIPROTKB|F1P299 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007219 "Notch signaling
pathway" evidence=ISS] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
EMBL:AADN02036511 EMBL:AADN02036512 EMBL:AADN02036513
EMBL:AADN02036514 EMBL:AADN02036515 EMBL:AADN02036516
EMBL:AADN02036517 EMBL:AADN02036518 IPI:IPI00578850
Ensembl:ENSGALT00000020945 Uniprot:F1P299
Length = 358
Score = 135 (52.6 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 49/186 (26%), Positives = 91/186 (48%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS----LKRGRASLLERAGVFVV 129
+ L+TG G G++++ L +G V G+ + ++T L + + +E + +
Sbjct: 11 VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNSQAHIE-GNMKLH 69
Query: 130 EGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTAN 189
GD+ DS L K+ N VK + + +L AQ+ V+ + + + G + LL+A KT
Sbjct: 70 YGDLTDSTCLVKIINEVKPNEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCG 129
Query: 190 PQPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-S 245
++ + AS+S ++G ++IP +K+ T P S Y A K I + Y L +
Sbjct: 130 LINSVKFYQASTSELFGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFA 187
Query: 246 ITGLRF 251
+ G+ F
Sbjct: 188 VNGILF 193
Score = 37 (18.1 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 366 DVLFTHANVSLARRELGYKPTTNLQTGLKKFV 397
+V F + + AR++L +KP +++ V
Sbjct: 314 EVDFLQGDCTKARQKLNWKPRVTFDELVREMV 345
>RGD|67377 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 1" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IDA]
[GO:0004769 "steroid delta-isomerase activity" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006700
"C21-steroid hormone biosynthetic process" evidence=IDA] [GO:0006702
"androgen biosynthetic process" evidence=IDA] [GO:0010288 "response
to lead ion" evidence=IEP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=TAS]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0030283
"testosterone dehydrogenase [NAD(P)] activity" evidence=TAS]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0033327
"Leydig cell differentiation" evidence=IEP] [GO:0034698 "response to
gonadotropin stimulus" evidence=IEP] [GO:0034757 "negative
regulation of iron ion transport" evidence=IMP] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:67377
GO:GO:0016021 GO:GO:0046686 GO:GO:0021766 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 GO:GO:0006702
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0005789 GO:GO:0031966
GO:GO:0033327 GO:GO:0051412 GO:GO:0010288
GeneTree:ENSGT00550000074557 EMBL:L17138 EMBL:BC089937
IPI:IPI00555268 PIR:A48769 RefSeq:NP_058961.4 RefSeq:XP_003749409.1
UniGene:Rn.109394 ProteinModelPortal:Q62878 STRING:Q62878
Ensembl:ENSRNOT00000026306 GeneID:100911154 GeneID:29632
KEGG:rno:100911154 KEGG:rno:29632 UCSC:RGD:67377 CTD:15497
InParanoid:Q62878 NextBio:609864 Genevestigator:Q62878
GermOnline:ENSRNOG00000019441 GO:GO:0030283 GO:GO:0006700
GO:GO:0034757 GO:GO:0034698 Uniprot:Q62878
Length = 373
Score = 123 (48.4 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 53/168 (31%), Positives = 81/168 (48%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG 131
G LVTGA GF+G + L + D + + + + + +L V V+EG
Sbjct: 3 GWSCLVTGAGGFLGQRIVQLLVQEKD-LKEVRVLDKVFRPETREEFFNLGTSIKVTVLEG 61
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNP-MSYVNSNIAGFVNLLEACKTANP 190
DI D+ L + + S V+H AA V NP + ++ N+ G NLLEAC A+
Sbjct: 62 DILDTQCLRRACQGI--SVVIHTAALIDVTGV--NPRQTILDVNLKGTQNLLEACVQASV 117
Query: 191 QPAIIWASSSSVYGLN--KKIPFS--EKDRTDQP-SSLYAATKKAGEE 233
PA I+ S+ V G N KKI + E++ + S+ Y +KK E+
Sbjct: 118 -PAFIYCSTVDVAGPNSYKKIILNGHEEEHHESTWSNPYPYSKKMAEK 164
Score = 51 (23.0 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 377 ARRELGYKPTTNLQTGLKKFVRW 399
A+R+LGYKP + + +K W
Sbjct: 334 AQRDLGYKPLVSWEEAKQKTSEW 356
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 57/212 (26%), Positives = 97/212 (45%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDIN 134
+LVTG AG+VG+ + L G V D + D L + E + +VEGDI
Sbjct: 8 ILVTGGAGYVGSALVPQLLELGYRVTVYDTLF-FGDDFLPK------ENPYLNIVEGDIR 60
Query: 135 DSLLLEKLFNLVKFSHVMHLAAQAG-VRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
D+ L++ F V+ LA + + + +S + N+ F +++A K A +
Sbjct: 61 DTERLKQCFK--DADAVISLACISNDASFELDETLS-TSINLEAFEPMVKAAKAAGVK-R 116
Query: 194 IIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 253
I+ASSSSVYG+++ +E+ P +LY K E + + + +T +R T
Sbjct: 117 FIYASSSSVYGVSETKDVTEEHPL-VPLTLYNKYKGMCEPLLFKHQSPEFVCVT-IRPAT 174
Query: 254 V--YGPWGRPDMVYFFFTKNILKRKPVMIFEG 283
+ Y P R D+ T + + + +F G
Sbjct: 175 LCGYAPRQRLDLSVNILTNHAVNNNKITVFGG 206
>UNIPROTKB|P26439 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IDA] [GO:0006694 "steroid
biosynthetic process" evidence=IDA] [GO:0004769 "steroid
delta-isomerase activity" evidence=IDA] [GO:0030868 "smooth
endoplasmic reticulum membrane" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0005758
"mitochondrial intermembrane space" evidence=ISS] [GO:0031966
"mitochondrial membrane" evidence=NAS] [GO:0005783 "endoplasmic
reticulum" evidence=NAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic process"
evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic process"
evidence=TAS] [GO:0008202 "steroid metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 eggNOG:COG0451
HOVERGEN:HBG000014 KO:K00070 BRENDA:1.1.1.145 Reactome:REACT_15493
DrugBank:DB00157 DrugBank:DB01108 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006704 GO:GO:0006705 GO:GO:0044281
Gene3D:3.40.50.720 OMA:WVFPRIA EMBL:M77144 EMBL:M67466
EMBL:CR627415 EMBL:AK222997 EMBL:AL359553 EMBL:CH471122
EMBL:BC038419 EMBL:BC131488 EMBL:S80140 EMBL:S60309 EMBL:S60310
IPI:IPI00218494 IPI:IPI00465001 PIR:A39488 RefSeq:NP_000189.1
RefSeq:NP_001159592.1 UniGene:Hs.654399 ProteinModelPortal:P26439
SMR:P26439 STRING:P26439 PhosphoSite:P26439 DMDM:112770
PRIDE:P26439 DNASU:3284 Ensembl:ENST00000369416
Ensembl:ENST00000543831 GeneID:3284 KEGG:hsa:3284 UCSC:uc001ehs.3
UCSC:uc001ehu.3 CTD:3284 GeneCards:GC01P119957 HGNC:HGNC:5218
MIM:201810 MIM:613890 neXtProt:NX_P26439 Orphanet:90791
Orphanet:1331 Orphanet:3185 PharmGKB:PA29487 InParanoid:P26439
PhylomeDB:P26439 BioCyc:MetaCyc:HS10943-MONOMER BindingDB:P26439
ChEMBL:CHEMBL3670 GenomeRNAi:3284 NextBio:13035 ArrayExpress:P26439
Bgee:P26439 CleanEx:HS_HSD3B2 Genevestigator:P26439
GermOnline:ENSG00000203859 Uniprot:P26439
Length = 372
Score = 121 (47.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 56/198 (28%), Positives = 86/198 (43%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG 131
G LVTGA G +G + L + + + + + L+ + L R + V+EG
Sbjct: 2 GWSCLVTGAGGLLGQRIVRLLVEEKE-LKEIRALDKAFRPELREEFSKLQNRTKLTVLEG 60
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
DI D L++ V S V+H A V + + + S +N N+ G LLEAC A+
Sbjct: 61 DILDEPFLKRACQDV--SVVIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 116
Query: 192 PAIIWASSSSVYGLNKKIPFSEKDRTDQP-----SSLYAATKKAGEEI---AHTYNHIYG 243
P I+ SS V G N + ++P + Y +KK E+ A+ +N G
Sbjct: 117 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWNLKNG 176
Query: 244 --LSITGLRFFTVYGPWG 259
L LR +YG G
Sbjct: 177 DTLYTCALRPTYIYGEGG 194
Score = 49 (22.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 377 ARRELGYKPTTNLQTGLKKFVRW 399
A+R+L YKP + + +K V W
Sbjct: 333 AQRDLAYKPLYSWEEAKQKTVEW 355
>TAIR|locus:2119161 [details] [associations]
symbol:FLDH "farnesol dehydrogenase" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006721 "terpenoid
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009788 "negative regulation of abscisic acid mediated
signaling pathway" evidence=IMP] [GO:0016487 "farnesol metabolic
process" evidence=IDA] [GO:0047886 "farnesol dehydrogenase
activity" evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005783 GO:GO:0005886 GO:GO:0005774 EMBL:CP002687
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AL035678
EMBL:AL161583 GO:GO:0009788 UniGene:At.46532 UniGene:At.66644
UniGene:At.68114 GO:GO:0016487 EMBL:AF370578 EMBL:BT002342
IPI:IPI00530523 PIR:T05987 RefSeq:NP_195062.1 HSSP:Q8T8E9
ProteinModelPortal:Q9SZB3 SMR:Q9SZB3 IntAct:Q9SZB3 STRING:Q9SZB3
PRIDE:Q9SZB3 EnsemblPlants:AT4G33360.1 GeneID:829473
KEGG:ath:AT4G33360 TAIR:At4g33360 HOGENOM:HOG000168005
InParanoid:Q9SZB3 KO:K15891 OMA:EVELAYG PhylomeDB:Q9SZB3
ProtClustDB:CLSN2685493 ArrayExpress:Q9SZB3 Genevestigator:Q9SZB3
GO:GO:0047886 Uniprot:Q9SZB3
Length = 344
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 82/352 (23%), Positives = 139/352 (39%)
Query: 66 PRSRAGGHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAG 125
P + +LVTG+ G++G + L RRG V +L R + L +
Sbjct: 6 PNTETENMKILVTGSTGYLGARLCHVLLRRGHSV-----------RALVRRTSDLSDLPP 54
Query: 126 -VFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEA 184
V + GD+ D L + V H AA V + +P +++ N+ G N+LEA
Sbjct: 55 EVELAYGDVTDYRSLTDACSGCDI--VFHAAAL--VEPWLPDPSRFISVNVGGLKNVLEA 110
Query: 185 CKTANPQPAIIWASSSSVYGLNKKIPFSEKDRTDQP--SSLYAATKKAGEEIAHTYNHIY 242
K II+ SS G +E ++ + Y +K +++A
Sbjct: 111 VKETKTVQKIIYTSSFFALGSTDGSVANENQVHNERFFCTEYERSKAVADKMALNAAS-E 169
Query: 243 GLSITGLRFFTVYGPWGR---PDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDI 299
G+ I L ++GP G+ +MV + R P I G + + F+++DD+
Sbjct: 170 GVPIILLYPGVIFGP-GKLTSANMVARMLIERFNGRLPGYIGSGTDRYS----FSHVDDV 224
Query: 300 VKGCLAALDXXXXXXXXXXXXXXXXQLRVFNL-----GNKSPE---PVGKLVSXXXXXXX 351
V+G +AA++ VF++ G K P P+ + +
Sbjct: 225 VEGHVAAMEKGRLGERYLLTGENASFKLVFDMAALITGTKKPNFSIPLWAINAYGWLSVL 284
Query: 352 XXXXXXXXPM--PANGDVLFTHANVSL--ARRELGYKPTTNLQTGLKKFVRW 399
P+ P VL + S A+ ELGY P + L+ GL++ + W
Sbjct: 285 ISRVTGKLPLISPPTVTVLRHQWSYSCDKAKLELGYNPRS-LKEGLEEMLPW 335
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 104 (41.7 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 46/181 (25%), Positives = 77/181 (42%)
Query: 131 GDI-NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTAN 189
GD+ N LL L ++ S H A+ A + N + N G ++EACK A
Sbjct: 55 GDLCNKEALLPALQDV---SVAFHCASPAP---SSDNKELFYKVNFMGTKAVIEACKEAG 108
Query: 190 PQPAIIWASSSSVY-GLNKKIPFSEKDRTDQPSSLYAATKKAGE-EIAHTYNHIYGLSIT 247
Q ++ +S+S V+ G + K + +P Y TK E E+ + T
Sbjct: 109 VQKLVLTSSASVVFEGTDIKNGTEDLPYAKKPIDYYTETKILQEKEVLSANDPDNNFFTT 168
Query: 248 GLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAAL 307
+R ++GP P +V + +I +G N DFTY++++V G + A
Sbjct: 169 AIRPHGIFGPRD-PQLVPILIQAAKSGKMKFIIGDGKNLV----DFTYVENVVHGHILAA 223
Query: 308 D 308
+
Sbjct: 224 E 224
Score = 53 (23.7 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 369 FTHANVSLARRELGYKPTTNLQTGLKKFVRWY 400
F + + A+R++GYKP +L + + ++ Y
Sbjct: 307 FHYYSCERAKRDMGYKPVVSLDEAIDRTLQSY 338
Score = 48 (22.0 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 69 RAGGHIVLVTGAAGFVGTHVSAALRRRGDGV 99
R+ G +V G +GF+G H+ L +G V
Sbjct: 6 RSTGKKCVVIGGSGFLGQHMVEKLLDKGYSV 36
>UNIPROTKB|Q5QP01 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AL359553 UniGene:Hs.654399 HGNC:HGNC:5218 GO:GO:0016853
IPI:IPI00642070 SMR:Q5QP01 STRING:Q5QP01 Ensembl:ENST00000433745
Uniprot:Q5QP01
Length = 195
Score = 121 (47.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 56/198 (28%), Positives = 86/198 (43%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG 131
G LVTGA G +G + L + + + + + L+ + L R + V+EG
Sbjct: 2 GWSCLVTGAGGLLGQRIVRLLVEEKE-LKEIRALDKAFRPELREEFSKLQNRTKLTVLEG 60
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
DI D L++ V S V+H A V + + + S +N N+ G LLEAC A+
Sbjct: 61 DILDEPFLKRACQDV--SVVIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 116
Query: 192 PAIIWASSSSVYGLNKKIPFSEKDRTDQP-----SSLYAATKKAGEEI---AHTYNHIYG 243
P I+ SS V G N + ++P + Y +KK E+ A+ +N G
Sbjct: 117 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWNLKNG 176
Query: 244 --LSITGLRFFTVYGPWG 259
L LR +YG G
Sbjct: 177 DTLYTCALRPTYIYGEGG 194
>TAIR|locus:2080933 [details] [associations]
symbol:MUR1 "MURUS 1" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS;IDA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005525
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009826 EMBL:AL132980
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 ProtClustDB:PLN02653
EMBL:U81805 EMBL:BT025710 EMBL:AY084574 IPI:IPI00519785 PIR:T45747
RefSeq:NP_190685.2 UniGene:At.23910 PDB:1N7G PDB:1N7H PDBsum:1N7G
PDBsum:1N7H ProteinModelPortal:P93031 SMR:P93031 STRING:P93031
PaxDb:P93031 PRIDE:P93031 EnsemblPlants:AT3G51160.1 GeneID:824280
KEGG:ath:AT3G51160 GeneFarm:4170 TAIR:At3g51160 InParanoid:P93031
OMA:DAIRDWG PhylomeDB:P93031 BioCyc:MetaCyc:AT3G51160-MONOMER
EvolutionaryTrace:P93031 Genevestigator:P93031 GermOnline:AT3G51160
Uniprot:P93031
Length = 373
Score = 118 (46.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGL----DNFNDYYDTSLKRGRASLLERAGVFVV 129
I L+TG G G++++ L +G V GL NFN + ++ +A + +
Sbjct: 30 IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV-NKALMKLH 88
Query: 130 EGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIA-GFVNLLEACK-- 186
D+ D+ L + +++K V +LAAQ+ V + + P Y +A G + LLEA +
Sbjct: 89 YADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIP-DYTADVVATGALRLLEAVRSH 147
Query: 187 TANPQPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYG 243
T + + + A SS ++G P + + T P S YAA+K A Y YG
Sbjct: 148 TIDSGRTVKYYQAGSSEMFG---STPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYG 204
Query: 244 L-SITGLRF 251
L + G+ F
Sbjct: 205 LFACNGILF 213
Score = 51 (23.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 362 PANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDYYSDSGKKSAV 413
PA D L + S A+ LG+KP Q G +K V+ +D + K+ V
Sbjct: 315 PAEVDNL--QGDASKAKEVLGWKP----QVGFEKLVKMMVDEDLELAKREKV 360
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 127 (49.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 49/183 (26%), Positives = 82/183 (44%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTS-LKRGRASLLERAGVFVVE-G 131
+ L+TG G G++++ L +G V G+ + +T + E+ F + G
Sbjct: 6 VALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSLNTERIDHIYQDNHEKNQKFFLHYG 65
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTAN-- 189
D+ DS L ++ V+ V +L AQ+ V + + P + + G + LLEA +
Sbjct: 66 DLTDSSNLTRILKDVQPDEVYNLGAQSHVAVSFECPEYTADVDAIGTLRLLEAIRFLGLE 125
Query: 190 PQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGL-SITG 248
+ AS+S +YG ++IP SE P S YA K I Y YG+ + G
Sbjct: 126 KKTKFYQASTSELYGEVQEIPQSETTPF-HPRSPYAVAKMYAYWIVVNYRESYGMYACNG 184
Query: 249 LRF 251
+ F
Sbjct: 185 ILF 187
>MGI|MGI:96234 [details] [associations]
symbol:Hsd3b2 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 2" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96234 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
BRENDA:5.3.3.1 CTD:3284 EMBL:AL606755 EMBL:BC026757 EMBL:BC040397
EMBL:M75886 IPI:IPI00230105 RefSeq:NP_694873.2 UniGene:Mm.482364
ProteinModelPortal:P26149 SMR:P26149 STRING:P26149
PhosphoSite:P26149 PaxDb:P26149 PRIDE:P26149
Ensembl:ENSMUST00000107021 Ensembl:ENSMUST00000107022
Ensembl:ENSMUST00000177651 GeneID:15493 KEGG:mmu:15493
GeneTree:ENSGT00550000074557 InParanoid:B1ARN7 OMA:HEEECHE
NextBio:288370 Bgee:P26149 Genevestigator:P26149
GermOnline:ENSMUSG00000063730 Uniprot:P26149
Length = 373
Score = 119 (46.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 51/167 (30%), Positives = 81/167 (48%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG 131
G LVTGA GF+G + L + D + + + + ++ +L V V+EG
Sbjct: 3 GWSCLVTGAGGFLGQRIIQLLVQEED-LEEIRVLDKVFRPETRKEFFNLETSIKVTVLEG 61
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
DI D+ L + + S V+H AA V + + ++ N+ G NLLEAC A+
Sbjct: 62 DILDTQYLRRACQGI--SVVIHTAAIIDVTGVIPR-QTILDVNLKGTQNLLEACIQASV- 117
Query: 192 PAIIWASSSSVYGLN--KKIPFS--EKDRTDQP-SSLYAATKKAGEE 233
PA I++SS V G N K+I + E++ + S Y +KK E+
Sbjct: 118 PAFIFSSSVDVAGPNSYKEIVLNGHEEECHESTWSDPYPYSKKMAEK 164
Score = 47 (21.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 377 ARRELGYKPTTNLQTGLKKFVRW 399
A+R+LGY+P + + +K W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>MGI|MGI:96235 [details] [associations]
symbol:Hsd3b3 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 3" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96235 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0005743 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694 OMA:WVFPRIA
GeneTree:ENSGT00550000074557 EMBL:M77015 IPI:IPI00111855
RefSeq:NP_001155214.1 RefSeq:NP_001155215.1 RefSeq:NP_001155216.1
RefSeq:NP_001155217.1 UniGene:Mm.158717 ProteinModelPortal:P26150
SMR:P26150 STRING:P26150 PaxDb:P26150 PRIDE:P26150
Ensembl:ENSMUST00000090743 Ensembl:ENSMUST00000107018
Ensembl:ENSMUST00000107019 GeneID:15494 KEGG:mmu:15494 CTD:15494
InParanoid:P26150 SABIO-RK:P26150 NextBio:288374 Bgee:P26150
Genevestigator:P26150 GermOnline:ENSMUSG00000062410 Uniprot:P26150
Length = 373
Score = 119 (46.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 51/167 (30%), Positives = 78/167 (46%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG 131
G LVTGA GF+G + L + D + + + + + +L V V+EG
Sbjct: 3 GWSCLVTGAGGFLGQRIIQLLVQEKD-LEEIRVLDKVFKPETREQFFNLGTSIKVTVLEG 61
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
DI D+ L + + S V+H AA V + + ++ N+ G NLLEAC A+
Sbjct: 62 DILDTQYLRRACQGI--SVVIHTAAIIDVTGVIPR-QTILDVNLKGTQNLLEACIQASV- 117
Query: 192 PAIIWASSSSVYGLN--KKIPFS---EKDRTDQPSSLYAATKKAGEE 233
PA I++SS V G N K I + ++ R S Y +KK E+
Sbjct: 118 PAFIFSSSVDVAGPNSYKDIVLNGHEDEHRESTWSDPYPYSKKMAEK 164
Score = 47 (21.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 377 ARRELGYKPTTNLQTGLKKFVRW 399
A+R+LGY+P + + +K W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>POMBASE|SPAC513.07 [details] [associations]
symbol:SPAC513.07 "flavonol reductase/cinnamoyl-CoA
reductase family" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 PomBase:SPAC513.07 GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 GO:GO:0033554 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016491 GO:GO:0044237
OrthoDB:EOG480N5D HOGENOM:HOG000167998 HSSP:Q9UUN9 PIR:T38902
RefSeq:NP_593981.1 ProteinModelPortal:Q9UT59 PRIDE:Q9UT59
EnsemblFungi:SPAC513.07.1 GeneID:2543471 KEGG:spo:SPAC513.07
OMA:YDICTIN NextBio:20804483 Uniprot:Q9UT59
Length = 336
Score = 125 (49.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 51/183 (27%), Positives = 79/183 (43%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG 131
G +VLVTG GF+G HV+ L + G V G + D L R L ++ FV+
Sbjct: 3 GKLVLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSMEKAD-ELIRLNPGLKDKIE-FVIVK 60
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
D++ S + + V+ + H+A+ V N ++ + G + +LEA +
Sbjct: 61 DVSASNAFDGVLKDVEL--ICHIASPFFVENVTDNKSQLLDPAVKGTLGILEAAQGVKSI 118
Query: 192 PAIIWASSSSVYGL------NKKIPFSEKD----------RTDQPSSLYAATKKAGEEIA 235
I+ SS + G N K+ ++EKD TD Y A+KK EE A
Sbjct: 119 KRIVITSSFAAVGNFQIDPHNNKV-YTEKDWNPITYEEALTTDNGIVAYCASKKLAEEAA 177
Query: 236 HTY 238
Y
Sbjct: 178 REY 180
>UNIPROTKB|Q4K8G6 [details] [associations]
symbol:PFL_4375 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0044237
HOGENOM:HOG000218208 RefSeq:YP_261467.1 ProteinModelPortal:Q4K8G6
STRING:Q4K8G6 GeneID:3478498 KEGG:pfl:PFL_4375 PATRIC:19878178
OMA:VFGAPFP ProtClustDB:CLSK2301589
BioCyc:PFLU220664:GIX8-4410-MONOMER Uniprot:Q4K8G6
Length = 324
Score = 124 (48.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 53/206 (25%), Positives = 85/206 (41%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYD-TSLKRGRASLLERAGVFVVEGDI 133
+LVTGAAGF+G + AL RG + T+ R L+ V V GDI
Sbjct: 3 ILVTGAAGFLGRRLIQALLERGSLTDRHGQLHPIQRITAFDRDPVQGLDDPRVQVKGGDI 62
Query: 134 NDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPA 193
D +L L + + HLAA + + + N + LLE + P
Sbjct: 63 TDPQVLANLID-ANTQGIFHLAAVVSSQAESDFDLG-MRVNFSATQGLLERARQLGTCPK 120
Query: 194 IIWASSSSVYGLNKKIPFSE-KDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSITGLRFF 252
+ SS +V+G ++P + D+ P S Y K + + Y+ + LR
Sbjct: 121 WVMTSSVAVFG--GQLPDTVGDDQVWSPQSSYGTQKAMNDLLLADYSRRGFVDGRSLRMP 178
Query: 253 TVYGPWGRPDMVYFFFTKNILKRKPV 278
T+ G+P++ F I+ R+P+
Sbjct: 179 TIVVRPGKPNLAASSFASGII-REPL 203
>MGI|MGI:2141879 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3
beta- and steroid delta-isomerase 7" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=ISO] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol
3-beta-dehydrogenase activity" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 MGI:MGI:2141879
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270
KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0047016 GO:GO:0001558
EMBL:AF277718 EMBL:BC132605 EMBL:BC138589 IPI:IPI00111009
RefSeq:NP_598704.2 UniGene:Mm.486340 ProteinModelPortal:Q9EQC1
SMR:Q9EQC1 STRING:Q9EQC1 PhosphoSite:Q9EQC1 PaxDb:Q9EQC1
PRIDE:Q9EQC1 Ensembl:ENSMUST00000046863 GeneID:101502
KEGG:mmu:101502 UCSC:uc009jwu.1 InParanoid:A2RTR5 ChiTaRS:HSD3B7
NextBio:354976 Bgee:Q9EQC1 Genevestigator:Q9EQC1
GermOnline:ENSMUSG00000042289 Uniprot:Q9EQC1
Length = 369
Score = 117 (46.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 54/207 (26%), Positives = 91/207 (43%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+ LVTG GF+G H+ L R + L F+ + + L+ +A ++ V ++GD+
Sbjct: 11 VYLVTGGCGFLGEHIVRMLLEREPRLRELRVFDLHLSSWLEELKAGPVQ---VTAIQGDV 67
Query: 134 NDSLLLEKLFNLVKFSHVM-HLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
+ ++ + SHV+ H A V + +P + N+ G N+++AC Q
Sbjct: 68 TQA---HEVAAAMSGSHVVIHTAGLVDV-FGKASPKTIHKVNVQGTQNVIDACVQTGTQ- 122
Query: 193 AIIWASSSSVYGLN-KKIPFSEKDRTDQP-----SSLYAATKKAGEEIAHTYN--HIYG- 243
+++ SS V G N K PF + D P S Y +K E++ N + G
Sbjct: 123 YLVYTSSMEVVGPNIKGHPFY-RGNEDTPYEAVHSHPYPCSKALAEQLVLEANGRKVNGG 181
Query: 244 --LSITGLRFFTVYGPWGRPDMVYFFF 268
L LR +YG G M F++
Sbjct: 182 LPLVTCALRPTGIYGE-GHQVMRDFYY 207
Score = 48 (22.0 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 363 ANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
A + FT + + A+R GYKP + + + ++W
Sbjct: 325 AMANTTFT-VSTNKAQRHFGYKPLFSWEESRTRTIQW 360
>DICTYBASE|DDB_G0284553 [details] [associations]
symbol:gmd "GDP-mannose dehydratase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;ISS] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0284553
GenomeReviews:CM000153_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AAFI02000066 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 RefSeq:XP_001134543.1 ProteinModelPortal:Q1ZXF7
SMR:Q1ZXF7 STRING:Q1ZXF7 EnsemblProtists:DDB0231676 GeneID:8624624
KEGG:ddi:DDB_G0284553 ProtClustDB:CLSZ2432853 Uniprot:Q1ZXF7
Length = 356
Score = 124 (48.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 47/187 (25%), Positives = 91/187 (48%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGL-DNFNDYYDTSLKRG--RASLL-ERAGVFVV 129
+ L+TG G G++++ L +G V G+ +++T +K + +L E+ + +
Sbjct: 7 VALITGITGQDGSYLTEFLISKGYYVHGIIQKIFHHFNTIVKNIYIKIDMLKEKESLTLH 66
Query: 130 EGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGF--VNLLEACKT 187
GD+ D+ L + + V + + +L AQ+ V+ + MS ++ G + LL+A ++
Sbjct: 67 YGDLTDASNLHSIVSKVNPTEIYNLGAQSHVKVSFD--MSEYTGDVDGLGCLRLLDAIRS 124
Query: 188 ANPQPAIIW--ASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGL- 244
+ + + AS+S +YG ++IP SE P S YA K+ I Y Y +
Sbjct: 125 CGMEKKVKYYQASTSELYGKVQEIPQSETTPF-YPRSPYAVAKQYAYWIVVNYREAYDMY 183
Query: 245 SITGLRF 251
+ G+ F
Sbjct: 184 ACNGILF 190
>UNIPROTKB|E2QS16 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270 KO:K12408
OMA:PCGLRLV EMBL:AAEX03004381 RefSeq:XP_547037.1
Ensembl:ENSCAFT00000026560 GeneID:489917 KEGG:cfa:489917
NextBio:20863025 Uniprot:E2QS16
Length = 369
Score = 110 (43.8 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+ LVTG GF+G HV L +R ++ L F+ + L+ + ++ V ++GD+
Sbjct: 11 VYLVTGGCGFLGEHVVRMLLQREPRLLELRVFDLHLGAWLEELKTGPVQ---VTAIQGDV 67
Query: 134 NDSLLLEKLFNLVKFSHVM-HLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
+ ++ V +HV+ H A V + +P + N+ G N++EAC +
Sbjct: 68 TQA---HEVAAAVAGAHVVIHTAGLVDV-FGRASPETIYEVNVQGTKNVIEACVQTGTR- 122
Query: 193 AIIWASSSSVYGLNKKIPFSEKDRTDQP 220
+++ SS V G N K + D P
Sbjct: 123 FLVYTSSMEVVGPNIKGHHFYRGNEDTP 150
Score = 55 (24.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 363 ANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
A + FT N ARR GY+P + + + +RW
Sbjct: 325 AVANTAFT-VNTDKARRHFGYEPLFSWEDSRTRTIRW 360
>ZFIN|ZDB-GENE-050419-45 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA;ISS] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0008417 "fucosyltransferase activity"
evidence=IMP] [GO:0007219 "Notch signaling pathway" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0036065
"fucosylation" evidence=IMP] [GO:0021744 "dorsal motor nucleus of
vagus nerve development" evidence=IMP] [GO:0021564 "vagus nerve
development" evidence=IMP] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 ZFIN:ZDB-GENE-050419-45 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0007219 GO:GO:0005622
GO:GO:0010842 GO:GO:0019673 GO:GO:0008417 EMBL:BX510653 KO:K01711
OMA:INPKYFR GO:GO:0008446 TIGRFAMs:TIGR01472
GeneTree:ENSGT00440000033640 CTD:2762 GO:GO:0021744 GO:GO:0021564
EMBL:BX678772 IPI:IPI00650926 RefSeq:NP_956783.3 UniGene:Dr.26662
Ensembl:ENSDART00000103234 GeneID:393461 KEGG:dre:393461
ArrayExpress:F1QPT3 Bgee:F1QPT3 Uniprot:F1QPT3
Length = 377
Score = 126 (49.4 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 50/192 (26%), Positives = 88/192 (45%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGL----DNFND-----YYDTSLKRGRASL-LER 123
+ ++TG G G++++ L +G V G+ +FN Y S+ +
Sbjct: 23 VAIITGITGQDGSYLAELLLAKGYEVHGILRRSSSFNTGRIEHLYHNPQTHTEGSIGATK 82
Query: 124 AGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLE 183
+ + GD+ DS L K+ N VK + + +L AQ+ V+ + + + G + LL+
Sbjct: 83 DHMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLD 142
Query: 184 ACKTANPQPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNH 240
A KT + + AS+S +YG ++IP +K+ T P S Y A K I +
Sbjct: 143 AVKTCGLTDTVRFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVINFRE 200
Query: 241 IYGL-SITGLRF 251
Y L ++ G+ F
Sbjct: 201 AYNLFAVNGILF 212
Score = 37 (18.1 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 366 DVLFTHANVSLARRELGYKPTTNLQTGLKKFV 397
+V + + S A + LG+KP + +K+ V
Sbjct: 333 EVDYLQGDSSKAFKVLGWKPRVTFEELVKEMV 364
>DICTYBASE|DDB_G0270184 [details] [associations]
symbol:ger "GDP-keto-6-deoxymannose 3,5-
epimerase/4-reductase" species:44689 "Dictyostelium discoideum"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0270184
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
RefSeq:XP_646604.1 HSSP:P32055 ProteinModelPortal:Q55C77
STRING:Q55C77 EnsemblProtists:DDB0305155 GeneID:8617576
KEGG:ddi:DDB_G0270184 InParanoid:Q55C77 ProtClustDB:CLSZ2431446
Uniprot:Q55C77
Length = 320
Score = 109 (43.4 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 42/167 (25%), Positives = 68/167 (40%)
Query: 96 GDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDINDSLLLEKLFNLVKFSHVMHLA 155
G G+VG Y + K + R+ + D+ F +K +HV+HLA
Sbjct: 15 GSGLVG-KGIEKYVKETDKSNDVWVFMRSS----DCDLKSRESTRSYFEKIKPTHVIHLA 69
Query: 156 AQAGVRYA-MKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWASSSSVYGLNKKIPFSEK 214
A+ G ++ MK + + NI N+L CK N + S+ ++ P E
Sbjct: 70 ARVGGLFSNMKYKVEFFRENIDINDNVLACCKEFNVVKCVS-CLSTCIFPDKTTYPIDET 128
Query: 215 ---DRTDQPSSL-YAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGP 257
+ PS+ YA K+ + + YN YG T + +YGP
Sbjct: 129 MIHNGPPHPSNEGYAYAKRMIDVLNRAYNEEYGCKFTSVIPTNIYGP 175
Score = 47 (21.6 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 363 ANGDVLFTHANVSLARR--ELGYKPTTNLQTGLKKFVRWYLDYYSDSGK 409
A+G T +N+ L +L + P +Q +K+ +W++D Y + K
Sbjct: 275 ADGQYKKTASNLKLKSLVPDLTFTP---IQQAIKESCQWFIDNYETARK 320
Score = 40 (19.1 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 75 VLVTGAAGFVG 85
VLVTG +G VG
Sbjct: 10 VLVTGGSGLVG 20
>TIGR_CMR|SO_1745 [details] [associations]
symbol:SO_1745 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0016229 "steroid dehydrogenase activity"
evidence=ISS] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GO:GO:0016853 EMBL:AE014299 GenomeReviews:AE014299_GR
OMA:PQVTRYR ProtClustDB:CLSK906403 RefSeq:NP_717355.1
ProteinModelPortal:Q8EG63 GeneID:1169523 KEGG:son:SO_1745
PATRIC:23523115 BioCyc:MetaCyc:MONOMER-17300 Uniprot:Q8EG63
Length = 387
Score = 118 (46.6 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 64/241 (26%), Positives = 103/241 (42%)
Query: 77 VTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDINDS 136
VTGA GF+G + L G V G RGR LE GV +V+GD+ +
Sbjct: 58 VTGAGGFLGKAICQRLIAAGIKVTGF-----------ARGRYLELEALGVTMVQGDLVNP 106
Query: 137 LLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQPAIIW 196
+++ V H+A++AGV + ++ SY N+ G N++ ACK +++
Sbjct: 107 EQVKQAMQGCDI--VFHVASKAGV-WGDRD--SYFCPNVKGAANVIAACKALKINK-LVY 160
Query: 197 ASSSSVY-------GLNKKIPFSEKDRTDQPSSLYAATKKAGE-EIAHTYNHIYGLSITG 248
S+ SV G+N+ P++ + S A K + + + N Y L
Sbjct: 161 TSTPSVTFAGEDESGINESTPYASRFLNYYAHSKAIAEKMMLDANQSSSTNAAYVLKTVA 220
Query: 249 LRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKG-CLAAL 307
LR ++GP P +V + L + ++ G V D YID+ LAAL
Sbjct: 221 LRPHLIWGP-NDPHLVPRVLARGRLGKLKLV---GREDKLV--DTIYIDNAAYAHVLAAL 274
Query: 308 D 308
+
Sbjct: 275 E 275
Score = 46 (21.3 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 373 NVSLARRELGYKPTTNLQTGLKK 395
++S A+++ GY +++ G+K+
Sbjct: 360 DISAAKQDFGYSALVSIEEGMKR 382
>TAIR|locus:2203771 [details] [associations]
symbol:3BETAHSD/D1
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISS] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0047012
"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
activity" evidence=IGI;IDA] [GO:0006084 "acetyl-CoA metabolic
process" evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic process"
evidence=RCA] [GO:0019745 "pentacyclic triterpenoid biosynthetic
process" evidence=RCA] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 PROSITE:PS50845 InterPro:IPR016040 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC015449
KO:K07748 GO:GO:0047012 EMBL:AY957470 EMBL:AK117478 EMBL:BT005166
EMBL:AY085272 IPI:IPI00543327 IPI:IPI00545978 PIR:F96513
RefSeq:NP_564502.1 RefSeq:NP_849779.1 UniGene:At.38654
ProteinModelPortal:Q9FX01 SMR:Q9FX01 IntAct:Q9FX01 PaxDb:Q9FX01
PRIDE:Q9FX01 EnsemblPlants:AT1G47290.2 GeneID:841132
KEGG:ath:AT1G47290 TAIR:At1g47290 InParanoid:Q9FX01 OMA:YLVELAY
PhylomeDB:Q9FX01 ProtClustDB:CLSN2688501 Genevestigator:Q9FX01
Uniprot:Q9FX01
Length = 439
Score = 114 (45.2 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 61/240 (25%), Positives = 103/240 (42%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNF------NDYYDTSLKRGRASLLERAG-VFV 128
+VTG GF H+ L R V + + N + +T + G A R+G V
Sbjct: 13 VVTGGRGFAARHLVEMLVRYQMFHVRIADLAPAIVLNPHEETGIL-GEAI---RSGRVQY 68
Query: 129 VEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTA 188
V D+ + + K F + V H+AA ++ N + N+ G N+++AC
Sbjct: 69 VSADLRNKTQVVKGFQGAEV--VFHMAAPDS---SINNHQLQYSVNVQGTTNVIDACIEV 123
Query: 189 NPQPAIIWASSSSVY-GLNKKIPFSEK-DRTDQPSSLYAATKKAGEEIAHTYNHIYGLSI 246
+ I +S S V+ G++ + E + + Y+ATK GE + N GL
Sbjct: 124 GVKRLIYTSSPSVVFDGVHGTLNADESLPYPPKHNDSYSATKAEGEALILKANGRSGLLT 183
Query: 247 TGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAA 306
+R +++GP G MV T + +I +G N DFTY++++V + A
Sbjct: 184 CCIRPSSIFGP-GDKLMVPSLVTAARAGKSKFIIGDGSNFY----DFTYVENVVHAHVCA 238
Score = 52 (23.4 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 375 SLARRELGYKPTTNLQTGLKKFV 397
S A+ LGY P LQ G+K+ +
Sbjct: 333 SKAKDRLGYSPVVPLQEGIKRTI 355
>ZFIN|ZDB-GENE-050417-163 [details] [associations]
symbol:nsdhl "NAD(P) dependent steroid
dehydrogenase-like" species:7955 "Danio rerio" [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 ZFIN:ZDB-GENE-050417-163 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 KO:K07748 CTD:50814 HOVERGEN:HBG054675 EMBL:BC093332
IPI:IPI00570211 RefSeq:NP_001017674.1 UniGene:Dr.84494
ProteinModelPortal:Q566U2 STRING:Q566U2 GeneID:550369
KEGG:dre:550369 InParanoid:Q566U2 NextBio:20879621
ArrayExpress:Q566U2 Uniprot:Q566U2
Length = 345
Score = 113 (44.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 48/189 (25%), Positives = 81/189 (42%)
Query: 122 ERAGVFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNL 181
E GV +GD+ D L L + L + S V H A+ A + + NI G +
Sbjct: 46 ELPGVTFYQGDLCDKLAL--VMALKEVSIVFHCASPAP---GSDDGALFQRVNIDGTRTV 100
Query: 182 LEACKTANPQPAIIWASSSSVY-GLNKKIPFSEKDRTDQPSSLYAATKKAGEEIA-HTYN 239
++AC A Q I+ +S+S V+ G + K + +P Y TK E++ +
Sbjct: 101 IQACHEAGVQKLILTSSASVVFEGTDIKNGKEDLPYAKKPIDYYTETKIKQEKLVLEACS 160
Query: 240 HIYGLSITGLRFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDI 299
G +R ++GP P +V + +I +G N DFTY++++
Sbjct: 161 KEKGFLTVAIRPHGIFGPRD-PQLVPILVDTARRGKMKFIIGDGSNLV----DFTYVENV 215
Query: 300 VKGCLAALD 308
V G + A +
Sbjct: 216 VHGHILAAE 224
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 370 THANVSLAR--RELGYKPTTNLQTGLKKFVRWY 400
TH S AR +++GY+P LQ + + V Y
Sbjct: 306 THHYYSCARAKQDMGYRPLVPLQEAVVRTVESY 338
>FB|FBgn0034794 [details] [associations]
symbol:Gmer "GDP-4-keto-6-deoxy-D-mannose
3,5-epimerase/4-reductase" species:7227 "Drosophila melanogaster"
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0042356 "GDP-4-dehydro-D-rhamnose reductase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0033227
"dsRNA transport" evidence=IMP] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:AE013599 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
GO:GO:0033227 KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
EMBL:AM231688 EMBL:AY060873 EMBL:AY119148 RefSeq:NP_611734.1
UniGene:Dm.739 ProteinModelPortal:Q9W1X8 SMR:Q9W1X8 STRING:Q9W1X8
PaxDb:Q9W1X8 PRIDE:Q9W1X8 EnsemblMetazoa:FBtr0071905 GeneID:37638
KEGG:dme:Dmel_CG3495 CTD:37638 FlyBase:FBgn0034794
GeneTree:ENSGT00390000004681 InParanoid:Q9W1X8 OrthoDB:EOG4XWDDK
PhylomeDB:Q9W1X8 GenomeRNAi:37638 NextBio:804682 Bgee:Q9W1X8
GermOnline:CG3495 Uniprot:Q9W1X8
Length = 321
Score = 94 (38.1 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 34/135 (25%), Positives = 63/135 (46%)
Query: 130 EGDINDSLLLEKLFNLVKFSHVMHLAAQAG-VRYAMKNPMSYVNSNIAGFVNLLEACKTA 188
+ D+ + + LF K +HV+HLAA G + + M N + ++ +N+ N+L+ TA
Sbjct: 38 DADLTNLAATQALFAREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQ---TA 94
Query: 189 NPQPAIIWAS--SSSVYGLNKKIPFSEK---DRTDQPSSL-YAATKKAGEEIAHTYNHIY 242
+ Q + S S+ ++ P E + PS+ Y+ K+ + H Y+ Y
Sbjct: 95 HEQGCVKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKY 154
Query: 243 GLSITGLRFFTVYGP 257
G T + ++GP
Sbjct: 155 GRVYTSVIPCNIFGP 169
Score = 55 (24.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 363 ANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRWYLDYYSDSGK 409
++G T +N L R L T+L+T + V+WY++ Y + K
Sbjct: 276 SDGQYKKTASNAKL-RSFLPDYAFTDLETAINASVKWYIENYDQARK 321
Score = 46 (21.3 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 75 VLVTGAAGFVGTHVSAALRRR 95
VLVTG G VG + A ++ +
Sbjct: 4 VLVTGGTGLVGKALEAVIKEQ 24
>TAIR|locus:2057786 [details] [associations]
symbol:3BETAHSD/D2
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;ISS] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IGI;IDA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0019745
"pentacyclic triterpenoid biosynthetic process" evidence=RCA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC004484
GO:GO:0047012 EMBL:DQ302749 EMBL:BX818951 EMBL:AK176177
IPI:IPI00540500 IPI:IPI00657508 IPI:IPI00929941 PIR:C84658
RefSeq:NP_001031422.1 RefSeq:NP_180194.2 UniGene:At.38921
ProteinModelPortal:Q67ZE1 SMR:Q67ZE1 PaxDb:Q67ZE1 PRIDE:Q67ZE1
EnsemblPlants:AT2G26260.1 GeneID:817166 KEGG:ath:AT2G26260
TAIR:At2g26260 InParanoid:Q67ZE1 OMA:DTLLWKD PhylomeDB:Q67ZE1
ProtClustDB:CLSN2716544 Genevestigator:Q67ZE1 Uniprot:Q67ZE1
Length = 564
Score = 119 (46.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 59/236 (25%), Positives = 100/236 (42%)
Query: 76 LVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLE--RAG-VFVVEGD 132
+VTG GF H+ L R V + + + G L E R+G V + D
Sbjct: 13 VVTGGRGFAARHLVEMLVRYEMFCVRIADLAPAIMLDPQEGNGVLDEGLRSGRVQYISAD 72
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
+ D + K F + V H+AA ++ N + N+ G N+++AC +
Sbjct: 73 LRDKSQVVKAFQGAEV--VFHMAAPDS---SINNHQLQYSVNVQGTQNVIDACVDVGVKR 127
Query: 193 AIIWASSSSVY-GLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
I +S S V+ G++ + +E + + Y+ATK GEE+ N GL +R
Sbjct: 128 LIYTSSPSVVFDGVHGILNGTESMAYPIKHNDSYSATKAEGEELIMKANGRNGLLTCCIR 187
Query: 251 FFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAA 306
+++GP R + K K +I +G N DFTY++++ + A
Sbjct: 188 PSSIFGPGDRLLVPSLVAAARAGKSK-FIIGDGNN----LYDFTYVENVAHAHVCA 238
Score = 46 (21.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 377 ARRELGYKPTTNLQTGLKKFV 397
A+ LGY P LQ G+++ +
Sbjct: 335 AKDRLGYAPVVPLQEGIRRTI 355
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 47/186 (25%), Positives = 86/186 (46%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGL----DNFNDYYDTSLKRGRASLLERAGVFVV 129
+ L+TG G G++++ L +G V G+ +FN + + + + +
Sbjct: 4 VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY- 62
Query: 130 EGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTAN 189
GD++D+ L ++ V+ V +L A + V + ++P + + G + LLEA +
Sbjct: 63 -GDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG 121
Query: 190 --PQPAIIWASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-S 245
+ AS+S +YGL ++IP +K+ T P S YA K I Y YG+ +
Sbjct: 122 LEKKTRFYQASTSELYGLVQEIP--QKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYA 179
Query: 246 ITGLRF 251
G+ F
Sbjct: 180 CNGILF 185
>DICTYBASE|DDB_G0291730 [details] [associations]
symbol:DDB_G0291730 species:44689 "Dictyostelium
discoideum" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
dictyBase:DDB_G0291730 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AAFI02000182 GO:GO:0044237
RefSeq:XP_629990.1 ProteinModelPortal:Q54E72
EnsemblProtists:DDB0184034 GeneID:8628320 KEGG:ddi:DDB_G0291730
InParanoid:Q54E72 OMA:NERIGYY Uniprot:Q54E72
Length = 457
Score = 85 (35.0 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 33/117 (28%), Positives = 51/117 (43%)
Query: 195 IWASSSSVYGLNKKI---PFSEKDRT-DQPSSLYAATKKAGEEIAHTYNHIYGLSITGLR 250
I+ S++ G K I P SE D PS Y TK+ E+ Y YGL LR
Sbjct: 200 IYCSTTETMGGKKPITGIPLSELDDPYSHPSYYYGETKRLAEDHVRRYEKKYGLDTIILR 259
Query: 251 FFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAAL 307
G +G+ D F + I ++F P+ A +T+IDD ++ + ++
Sbjct: 260 ---PTGIFGKDDQFSIF--ELIQSVSYGILFFIPSFANGNIMYTHIDDFIQSIMLSI 311
Score = 59 (25.8 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 377 ARRELGYKPTTNLQTGLKKFVRWYLD-----YYSDS 407
A+RELG+KP + GL + YL+ YYS S
Sbjct: 404 AKRELGFKPQYTFKQGLNVTIEEYLENERIGYYSVS 439
Score = 58 (25.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 32/133 (24%), Positives = 62/133 (46%)
Query: 75 VLVTGAAGFVGTHVSAALRR----RGDGVVGLDNFNDYYDTSLKRGRASLLERAGVF-VV 129
+L+TG G+VG+++ L + + V L + +K L+E+ F ++
Sbjct: 7 ILITGLTGYVGSNLIKVLLEDDSTKNNNVYALVREKSSHSEFIKE----LIEKYKNFNLI 62
Query: 130 EGDIND--------SLLLEKLFNLV---KFSHVMHLAAQAGVRYAMKNPMSYVN---SNI 175
GD D S +E L +++ + ++HLA+ + + +N + Y N +N+
Sbjct: 63 IGDFVDLQSSVTSQSKCIEFLKSIITNNQIKVIIHLASM--MDFYPRNSIDYSNIHKTNV 120
Query: 176 AGFVNLLEACKTA 188
G NLL+A T+
Sbjct: 121 IGTENLLKASCTS 133
>UNIPROTKB|E2RC02 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070401 "NADP+ binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0005622 GO:GO:0070401 GO:GO:0019673
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:DAIRDWG EMBL:AAEX03017462 Ensembl:ENSCAFT00000014648
Uniprot:E2RC02
Length = 300
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
GD+ DS L K+ N VK + + +L AQ+ V+ + + + G + LL+A KT
Sbjct: 56 GDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGL 115
Query: 191 QPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-SI 246
++ + AS+S +YG ++IP +K+ T P S Y A K I + Y L ++
Sbjct: 116 INSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAV 173
Query: 247 TGLRF 251
G+ F
Sbjct: 174 NGILF 178
>UNIPROTKB|E9PI88 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GO:GO:0019673 EMBL:AL034344 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AL033517 EMBL:AL035693 EMBL:AL137179
EMBL:AL158139 RefSeq:NP_001240775.1 UniGene:Hs.144496
UniGene:Hs.660919 GeneID:2762 KEGG:hsa:2762 CTD:2762 HGNC:HGNC:4369
ChiTaRS:GMDS GenomeRNAi:2762 EMBL:AL354670 EMBL:AL451141
EMBL:AL591048 IPI:IPI00642048 ProteinModelPortal:E9PI88 SMR:E9PI88
Ensembl:ENST00000530927 UCSC:uc021ykn.1 ArrayExpress:E9PI88
Bgee:E9PI88 Uniprot:E9PI88
Length = 342
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
GD+ DS L K+ N VK + + +L AQ+ V+ + + + G + LL+A KT
Sbjct: 55 GDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGL 114
Query: 191 QPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-SI 246
++ + AS+S +YG ++IP +K+ T P S Y A K I + Y L ++
Sbjct: 115 INSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAV 172
Query: 247 TGLRF 251
G+ F
Sbjct: 173 NGILF 177
>UNIPROTKB|F6W683 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD Ensembl:ENSECAT00000001963 Uniprot:F6W683
Length = 343
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
GD+ DS L K+ N VK + + +L AQ+ V+ + + + G + LL+A KT
Sbjct: 56 GDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGL 115
Query: 191 QPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-SI 246
++ + AS+S +YG ++IP +K+ T P S Y A K I + Y L ++
Sbjct: 116 INSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAV 173
Query: 247 TGLRF 251
G+ F
Sbjct: 174 NGILF 178
>RGD|2838 [details] [associations]
symbol:Hsd3b5 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 5" species:10116 "Rattus norvegicus"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0005496 "steroid binding" evidence=IDA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;IDA;TAS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016229 "steroid dehydrogenase activity"
evidence=TAS] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0042448 "progesterone metabolic process" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA]
[GO:0050810 "regulation of steroid biosynthetic process"
evidence=IDA] [GO:0051287 "NAD binding" evidence=IDA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 RGD:2838 GO:GO:0043231 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0003854 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0031966 GO:GO:0006694 GO:GO:0051287 GO:GO:0005496
GeneTree:ENSGT00550000074557 CTD:15496 EMBL:M67465 EMBL:BC092571
IPI:IPI00231782 PIR:A37404 RefSeq:NP_036716.1 RefSeq:XP_003749408.1
UniGene:Rn.34902 ProteinModelPortal:P27364 STRING:P27364
PhosphoSite:P27364 PRIDE:P27364 Ensembl:ENSRNOT00000026290
GeneID:100911116 GeneID:24470 KEGG:rno:100911116 KEGG:rno:24470
UCSC:RGD:2838 InParanoid:P27364 BindingDB:P27364 ChEMBL:CHEMBL4490
NextBio:603409 Genevestigator:P27364 GermOnline:ENSRNOG00000019417
GO:GO:0042448 GO:GO:0050810 Uniprot:P27364
Length = 373
Score = 111 (44.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 47/170 (27%), Positives = 79/170 (46%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDT---SLKRGRASLLERAGVFV 128
G LVTGA GF+G + L + + L Y T K + L +A V V
Sbjct: 3 GWSCLVTGAGGFLGQRIVQMLVQEKE----LQEVRVLYRTFSPKHKEELSKLQTKAKVTV 58
Query: 129 VEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTA 188
+ GDI D+ L + S ++H AA + + + ++ N+ G LL+AC A
Sbjct: 59 LRGDIVDAQFLRRACQ--GMSVIIHTAAALDIAGFLPR-QTILDVNVKGTQLLLDACVEA 115
Query: 189 NPQPAIIWASSSSVYGLN--KKIPFSEKDRTDQPSSL---YAATKKAGEE 233
+ PA I++SS+ V G N K+ ++++ + S+ Y +K+ E+
Sbjct: 116 SV-PAFIYSSSTGVAGPNSYKETILNDREEEHRESTWSNPYPYSKRMAEK 164
Score = 47 (21.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 377 ARRELGYKPTTNLQTGLKKFVRW 399
A+R+LGY+P + + +K W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|Q4KC82 [details] [associations]
symbol:arnA "Bifunctional polymyxin resistance protein
ArnA" species:220664 "Pseudomonas protegens Pf-5" [GO:0009245
"lipid A biosynthetic process" evidence=ISS] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=ISS] [GO:0016831 "carboxy-lyase activity" evidence=ISS]
[GO:0046398 "UDP-glucuronate metabolic process" evidence=ISS]
[GO:0046677 "response to antibiotic" evidence=ISS]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
SUPFAM:SSF50486 GO:GO:0016491 GO:GO:0046677 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0009245 GO:GO:0016742 GO:GO:0008168
Gene3D:3.10.25.10 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
RefSeq:YP_260151.1 ProteinModelPortal:Q4KC82 SMR:Q4KC82
STRING:Q4KC82 GeneID:3475938 KEGG:pfl:PFL_3045 PATRIC:19875401
BioCyc:PFLU220664:GIX8-3059-MONOMER GO:GO:0016831 GO:GO:0046398
Uniprot:Q4KC82
Length = 668
Score = 121 (47.7 bits), Expect = 0.00032, P = 0.00032
Identities = 65/251 (25%), Positives = 111/251 (44%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGD-GVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
VL+ G GF+G H+S L R V GLD +D +++R R+ VEGDI
Sbjct: 321 VLILGVNGFIGNHLSERLLRDDKYDVYGLDIGSD----AIERLRS----HPNFHFVEGDI 372
Query: 134 N-DSLLLEKLFNLVKFSHVMHLAAQAG-VRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
+ S +E +++ K V+ L A A + Y +NP+ + + L+ C N +
Sbjct: 373 SIHSEWIE--YHIKKCDVVLPLVAIATPIEYT-RNPLRVFELDFEENLKLVRYCVKYNKR 429
Query: 192 PAIIWASSSSVYGLNKKIPFSEKDRT------DQPSSLYAATKKAGEEIAHTYNHIYGLS 245
+I+ S+S VYG+ + F E ++ +Y+ +K+ + + Y GL+
Sbjct: 430 --VIFPSTSEVYGMCQDKNFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYG-AKGLN 486
Query: 246 ITGLRFFTVYGP-WGRPDMVYFFFTK-------NILKRKPVMIFEGPNHATVARDFTYID 297
T R F GP R D ++ N+++ P+ +F+G R FT I
Sbjct: 487 FTLFRPFNWMGPRLDRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQK---RCFTDIA 543
Query: 298 DIVKGCLAALD 308
D ++ +D
Sbjct: 544 DGIEALARIVD 554
>UNIPROTKB|I3L2H6 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 EMBL:AC135048 HGNC:HGNC:18324 GO:GO:0047016
GO:GO:0001558 Ensembl:ENST00000574447 Bgee:I3L2H6 Uniprot:I3L2H6
Length = 176
Score = 108 (43.1 bits), Expect = 0.00048, P = 0.00048
Identities = 40/149 (26%), Positives = 68/149 (45%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+ LVTG GF+G HV L +R + L F+ + L+ + + V ++GD+
Sbjct: 11 VYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVR---VTAIQGDV 67
Query: 134 NDSLLLEKLFNLVKFSHVM-HLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
+ ++ V +HV+ H A V + +P + N+ G N++EAC +
Sbjct: 68 TQA---HEVAAAVAGAHVVIHTAGLVDV-FGRASPKTIHEVNVQGTRNVIEACVQTGTR- 122
Query: 193 AIIWASSSSVYGLNKK-IPFSEKDRTDQP 220
+++ SS V G N K PF + D P
Sbjct: 123 FLVYTSSMEVVGPNTKGHPFY-RGNEDTP 150
>UNIPROTKB|Q4K6F9 [details] [associations]
symbol:rfbG "CDP-glucose-4,6-dehydratase" species:220664
"Pseudomonas protegens Pf-5" [GO:0009243 "O antigen biosynthetic
process" evidence=ISS] [GO:0047733 "CDP-glucose 4,6-dehydratase
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0009243
RefSeq:YP_262174.1 ProteinModelPortal:Q4K6F9 SMR:Q4K6F9
STRING:Q4K6F9 GeneID:3479503 KEGG:pfl:PFL_5095 PATRIC:19879659
HOGENOM:HOG000167999 KO:K01709 OMA:KCYENKE ProtClustDB:CLSK715086
BioCyc:PFLU220664:GIX8-5136-MONOMER GO:GO:0047733
InterPro:IPR013445 PANTHER:PTHR10366:SF33 TIGRFAMs:TIGR02622
Uniprot:Q4K6F9
Length = 361
Score = 93 (37.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 44/176 (25%), Positives = 83/176 (47%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG 131
G V +TG GF G+ ++ L+ G V G T A++++ G+ G
Sbjct: 12 GKKVFLTGHTGFKGSWLALWLQSMGAQVQGFALMPP--TTPALFDVANVVK--GMQSCIG 67
Query: 132 DINDSLLLEKLFNLVKFSH--VMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTAN 189
DI D L ++V F+ ++H+AAQ VR + + P+ +N+ G +++LEA +
Sbjct: 68 DIRD--LQAITHSMVGFNPDVLIHMAAQPLVRLSYREPLETYATNVMGTLHVLEAARLCP 125
Query: 190 PQPAIIWASSSSVYGLNKKIPFSEKDRTDQPSS---LYAATKKAGEEIAHTYNHIY 242
AI+ ++ Y N++ + ++ D+P Y+ +K E I +Y + +
Sbjct: 126 NLRAIVNVTTDKCYE-NREWEWGYRE--DEPMGGHDPYSNSKGCVELITASYRNSF 178
Score = 64 (27.6 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 373 NVSLARRELGYKPTTNLQTGLKKFVRWYLDYYS 405
++S AR L + PT NL+ L + V+W+ + S
Sbjct: 305 DISKARARLNWAPTWNLEKTLSRIVQWHRAFLS 337
>UNIPROTKB|Q3ZBE9 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9913 "Bos taurus" [GO:0060716
"labyrinthine layer blood vessel development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0006695 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224 KO:K07748
GO:GO:0047012 EMBL:BC103389 IPI:IPI00716133 RefSeq:NP_001030559.1
UniGene:Bt.49296 ProteinModelPortal:Q3ZBE9 STRING:Q3ZBE9
PRIDE:Q3ZBE9 Ensembl:ENSBTAT00000012167 GeneID:616694
KEGG:bta:616694 CTD:50814 HOVERGEN:HBG054675 InParanoid:Q3ZBE9
OrthoDB:EOG4NKBVW NextBio:20900265 Uniprot:Q3ZBE9
Length = 356
Score = 102 (41.0 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 42/179 (23%), Positives = 74/179 (41%)
Query: 133 INDSLLLEKLFNLVK-FSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
+ D + L+ +K S V H A+ N + N G N++E CK A Q
Sbjct: 65 LGDLCSQQDLYPALKGVSTVFHCASPPPFN---NNKELFYRVNYIGTKNVIETCKEAGVQ 121
Query: 192 PAIIWASSSSVY-GLNKKIPFSEKDRTDQPSSLYAATKKAGEE-IAHTYNHIYGLSITGL 249
I+ +S+S ++ G++ K + +P Y TK E + ++ T +
Sbjct: 122 KLILTSSASVIFEGVDIKNGTEDLPYATKPIDYYTETKILQERAVLGAHDPEKNFLTTAI 181
Query: 250 RFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
R ++GP P +V + MI G N DFT+++++V G + A +
Sbjct: 182 RPHGIFGPRD-PQLVPILIEAAKKGKMKFMIGNGKNLV----DFTFVENVVHGHILAAE 235
Score = 45 (20.9 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 77 VTGAAGFVGTHVSAALRRRGDGV 99
V G GF+G H+ L RG V
Sbjct: 25 VIGGCGFLGQHMVEQLLARGYAV 47
Score = 43 (20.2 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 369 FTHANVSLARRELGYKPTTNLQTGLKKFVR 398
F + + A++ +GY+P + + K VR
Sbjct: 318 FHYYSCEKAKKLMGYRPLVTMDDAVDKTVR 347
>RGD|1592771 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid
dehydrogenase/delta-5-delta-4 isomerase type II" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 RGD:1592771 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 108 (43.1 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 47/167 (28%), Positives = 77/167 (46%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG 131
G LVTGA GFVG + L + + + + + + K + L +A V ++EG
Sbjct: 3 GWSCLVTGAGGFVGQRIIRMLVQEKE-LQEVRALDKVFRPETKEEFSKLQTKAKVTMLEG 61
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
DI D+ L + + S V+H A+ + + ++ N+ G NLLEA A+
Sbjct: 62 DILDAQYLRRACQGI--SVVIHTASVMDFSRVLPR-QTILDVNLKGTQNLLEAGIHASV- 117
Query: 192 PAIIWASSSSVYGLN--KKIPFSEKDRTDQPSSL---YAATKKAGEE 233
PA I+ S+ V G N KK + ++ S+ Y +KK E+
Sbjct: 118 PAFIYCSTVDVAGPNSYKKTILNGREEEHHESTWSNPYPYSKKMAEK 164
Score = 47 (21.6 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 377 ARRELGYKPTTNLQTGLKKFVRW 399
A+R+LGY+P + + +K W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|P22072 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:1592771
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 108 (43.1 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 47/167 (28%), Positives = 77/167 (46%)
Query: 72 GHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEG 131
G LVTGA GFVG + L + + + + + + K + L +A V ++EG
Sbjct: 3 GWSCLVTGAGGFVGQRIIRMLVQEKE-LQEVRALDKVFRPETKEEFSKLQTKAKVTMLEG 61
Query: 132 DINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
DI D+ L + + S V+H A+ + + ++ N+ G NLLEA A+
Sbjct: 62 DILDAQYLRRACQGI--SVVIHTASVMDFSRVLPR-QTILDVNLKGTQNLLEAGIHASV- 117
Query: 192 PAIIWASSSSVYGLN--KKIPFSEKDRTDQPSSL---YAATKKAGEE 233
PA I+ S+ V G N KK + ++ S+ Y +KK E+
Sbjct: 118 PAFIYCSTVDVAGPNSYKKTILNGREEEHHESTWSNPYPYSKKMAEK 164
Score = 47 (21.6 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 377 ARRELGYKPTTNLQTGLKKFVRW 399
A+R+LGY+P + + +K W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|Q3MHF2 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016853 "isomerase activity" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
CTD:80270 KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0016853
EMBL:DAAA02057919 EMBL:BC105259 EMBL:BT030700 IPI:IPI00692623
RefSeq:NP_001029868.1 UniGene:Bt.7734 STRING:Q3MHF2
Ensembl:ENSBTAT00000003028 GeneID:540229 KEGG:bta:540229
InParanoid:Q3MHF2 NextBio:20878503 Uniprot:Q3MHF2
Length = 368
Score = 105 (42.0 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 39/140 (27%), Positives = 66/140 (47%)
Query: 74 IVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
+ LVTG GF+G HV L +R + L F+ + L+ + ++ V ++GD+
Sbjct: 11 VYLVTGGCGFLGEHVVRMLLQREPRLRELRIFDLHLGPWLEELKTGPVQ---VTAIQGDV 67
Query: 134 NDSLLLEKLFNLVKFSHVM-HLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
+ ++ V +HV+ H A V + +P + N+ G N++EAC +
Sbjct: 68 TQA---HEVAAAVAGAHVVIHTAGLVDV-FGKTSPETIHEVNVQGTQNVIEACVQTGTR- 122
Query: 193 AIIWASSSSVYGLN-KKIPF 211
+I+ SS V G N K PF
Sbjct: 123 FLIYTSSMEVVGPNIKGQPF 142
Score = 50 (22.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 363 ANGDVLFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
A + FT + ARR GY+P + + + +RW
Sbjct: 325 AVANTTFT-VSTDKARRHFGYEPLFSWEESRTRTIRW 360
>UNIPROTKB|F6XJP3 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 OMA:IQLQPTF
Ensembl:ENSCAFT00000030435 EMBL:AAEX03027066
ProteinModelPortal:F6XJP3 Uniprot:F6XJP3
Length = 361
Score = 101 (40.6 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 44/179 (24%), Positives = 74/179 (41%)
Query: 133 INDSLLLEKLFNLVK-FSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
+ D + L+ +K S V H A+ + N + N G N++E CK A Q
Sbjct: 70 LGDLCSQQDLYPALKGVSTVFHCASPPP---SSNNKELFYRVNYIGTKNVIETCKEAGVQ 126
Query: 192 PAIIWASSSSVY-GLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSIT-GL 249
I+ +S+S ++ G+N K + +P Y TK E N +T +
Sbjct: 127 KLILTSSASVIFEGVNIKNGTEDLPYAMKPIDYYTETKILQERAVLDANDPKRNFLTMAI 186
Query: 250 RFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
R ++GP P +V + MI G N DFT+++++V G + A +
Sbjct: 187 RPHGIFGPRD-PQLVPILIEAARKGKMKFMIGNGENLV----DFTFVENVVHGHILAAE 240
Score = 45 (20.9 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 77 VTGAAGFVGTHVSAALRRRG 96
V G +GF+G H+ L RG
Sbjct: 30 VIGGSGFLGQHMVEQLLARG 49
Score = 43 (20.2 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 369 FTHANVSLARRELGYKPTTNLQTGLKKFVR 398
F + + AR+ +GY+P + +++ V+
Sbjct: 323 FHYYSCERARKVMGYRPLVTMDDAIERTVQ 352
>UNIPROTKB|Q5HTB4 [details] [associations]
symbol:flmA "Polysaccharide biosynthesis protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1086
HOGENOM:HOG000257079 OMA:ICIHAAA InterPro:IPR020025
TIGRFAMs:TIGR03589 RefSeq:YP_179471.1 ProteinModelPortal:Q5HTB4
SMR:Q5HTB4 STRING:Q5HTB4 GeneID:3232117 KEGG:cjr:CJE1485
PATRIC:20044764 KO:K15894 ProtClustDB:CLSK879183
BioCyc:CJEJ195099:GJC0-1514-MONOMER Uniprot:Q5HTB4
Length = 334
Score = 113 (44.8 bits), Expect = 0.00084, P = 0.00084
Identities = 58/198 (29%), Positives = 84/198 (42%)
Query: 75 VLVTGAAGFVG-THVSAALRRRGDGVVGLDNFNDYYDTSLKRGR-ASLLERAGVFVVEGD 132
+L+TG G G T+ L + + Y LK+ AS+ + + GD
Sbjct: 7 ILITGGTGSFGKTYTKVLLENYKPNKIII-----YSRDELKQFEMASVFNASCMRYFIGD 61
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
+ D L V F V+H AA V A NPM + +NI G N+++AC N
Sbjct: 62 VRDKERLSTAMRDVDF--VIHAAAMKHVPIAEYNPMECIKTNIHGAQNVIDAC-FEN--- 115
Query: 193 AIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSIT--GL- 249
G+ K I S D+ P +LY ATK A +++ N+I G T G+
Sbjct: 116 -----------GVKKCIALST-DKACNPVNLYGATKLASDKLFVAANNIAGNKQTRFGVT 163
Query: 250 RFFTVYGPWGRPDMVYFF 267
R+ V G R +V FF
Sbjct: 164 RYGNVVG--SRGSVVPFF 179
>TIGR_CMR|CJE_1485 [details] [associations]
symbol:CJE_1485 "polysaccharide biosynthesis protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1086
HOGENOM:HOG000257079 OMA:ICIHAAA InterPro:IPR020025
TIGRFAMs:TIGR03589 RefSeq:YP_179471.1 ProteinModelPortal:Q5HTB4
SMR:Q5HTB4 STRING:Q5HTB4 GeneID:3232117 KEGG:cjr:CJE1485
PATRIC:20044764 KO:K15894 ProtClustDB:CLSK879183
BioCyc:CJEJ195099:GJC0-1514-MONOMER Uniprot:Q5HTB4
Length = 334
Score = 113 (44.8 bits), Expect = 0.00084, P = 0.00084
Identities = 58/198 (29%), Positives = 84/198 (42%)
Query: 75 VLVTGAAGFVG-THVSAALRRRGDGVVGLDNFNDYYDTSLKRGR-ASLLERAGVFVVEGD 132
+L+TG G G T+ L + + Y LK+ AS+ + + GD
Sbjct: 7 ILITGGTGSFGKTYTKVLLENYKPNKIII-----YSRDELKQFEMASVFNASCMRYFIGD 61
Query: 133 INDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQP 192
+ D L V F V+H AA V A NPM + +NI G N+++AC N
Sbjct: 62 VRDKERLSTAMRDVDF--VIHAAAMKHVPIAEYNPMECIKTNIHGAQNVIDAC-FEN--- 115
Query: 193 AIIWASSSSVYGLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSIT--GL- 249
G+ K I S D+ P +LY ATK A +++ N+I G T G+
Sbjct: 116 -----------GVKKCIALST-DKACNPVNLYGATKLASDKLFVAANNIAGNKQTRFGVT 163
Query: 250 RFFTVYGPWGRPDMVYFF 267
R+ V G R +V FF
Sbjct: 164 RYGNVVG--SRGSVVPFF 179
>UNIPROTKB|P77398 [details] [associations]
symbol:arnA "fused UDP-L-Ara4N formyltransferase and
UDP-GlcA C-4''-decarboxylase" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046677
"response to antibiotic" evidence=IEA;IDA] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA;IDA] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IDA]
[GO:0009245 "lipid A biosynthetic process" evidence=IEA;IDA]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR SUPFAM:SSF50486 GO:GO:0046677 GO:GO:0009245
GO:GO:0016616 GO:GO:0016742 GO:GO:0008168 Gene3D:3.10.25.10
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103 EMBL:AY057445
PIR:E64996 RefSeq:NP_416758.1 RefSeq:YP_490494.1 PDB:1U9J PDB:1YRW
PDB:1Z73 PDB:1Z74 PDB:1Z75 PDB:1Z7B PDB:1Z7E PDB:2BLL PDB:2BLN
PDBsum:1U9J PDBsum:1YRW PDBsum:1Z73 PDBsum:1Z74 PDBsum:1Z75
PDBsum:1Z7B PDBsum:1Z7E PDBsum:2BLL PDBsum:2BLN
ProteinModelPortal:P77398 SMR:P77398 DIP:DIP-11961N IntAct:P77398
MINT:MINT-1257581 PaxDb:P77398 PRIDE:P77398
EnsemblBacteria:EBESCT00000003653 EnsemblBacteria:EBESCT00000017866
GeneID:12931503 GeneID:947683 KEGG:ecj:Y75_p2218 KEGG:eco:b2255
PATRIC:32119875 EchoBASE:EB3844 EcoGene:EG14091
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
BioCyc:EcoCyc:G7168-MONOMER BioCyc:ECOL316407:JW2249-MONOMER
BioCyc:MetaCyc:G7168-MONOMER SABIO-RK:P77398
EvolutionaryTrace:P77398 Genevestigator:P77398 Uniprot:P77398
Length = 660
Score = 117 (46.2 bits), Expect = 0.00086, P = 0.00086
Identities = 52/192 (27%), Positives = 84/192 (43%)
Query: 75 VLVTGAAGFVGTHVSAALRRRGD-GVVGLDNFNDYYDTSLKRGRASLLERAGVFVVEGDI 133
VL+ G GF+G H++ L R V GLD +D ++ R L VEGDI
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSD----AISR----FLNHPHFHFVEGDI 369
Query: 134 N-DSLLLEKLFNLVKFSHVMHLAAQAG-VRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
+ S +E +++ K V+ L A A + Y +NP+ + + ++ C +
Sbjct: 370 SIHSEWIE--YHVKKCDVVLPLVAIATPIEYT-RNPLRVFELDFEENLRIIRYC--VKYR 424
Query: 192 PAIIWASSSSVYGLNKKIPFSEKDRT------DQPSSLYAATKKAGEEIAHTYNHIYGLS 245
II+ S+S VYG+ F E ++P +Y+ +K+ + + Y GL
Sbjct: 425 KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQ 484
Query: 246 ITGLRFFTVYGP 257
T R F GP
Sbjct: 485 FTLFRPFNWMGP 496
>UNIPROTKB|P96816 [details] [associations]
symbol:Rv0139 "Dihydroflavonol-4-reductase" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GO:GO:0005618 GO:GO:0003824 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
HOGENOM:HOG000168005 EMBL:CP003248 PIR:F70616 RefSeq:NP_214653.1
RefSeq:NP_334557.1 RefSeq:YP_006513458.1 SMR:P96816 DNASU:886860
EnsemblBacteria:EBMYCT00000002589 EnsemblBacteria:EBMYCT00000072636
GeneID:13316122 GeneID:886860 GeneID:923018 KEGG:mtc:MT0147
KEGG:mtu:Rv0139 KEGG:mtv:RVBD_0139 PATRIC:18122051
TubercuList:Rv0139 KO:K00091 OMA:QAENLVM ProtClustDB:CLSK790293
Uniprot:P96816
Length = 340
Score = 103 (41.3 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 164 MKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWASSSSVYGLNKKIPFSEKDRTD-QPSS 222
+++P +N+AG N+L+ A+ + ++ SS + G + +E+DR D + +
Sbjct: 85 LRDPSPLFRTNVAGLRNVLDVATDASLR-RFVFTSSYATVGRRRGHVATEEDRVDTRKVT 143
Query: 223 LYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYG--PWGR 260
Y ++ A E++ Y H GL + T YG WGR
Sbjct: 144 PYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGGGDWGR 183
Score = 50 (22.7 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 76 LVTGAAGFVGTHVSAAL 92
LV GA GF+G+HV+ L
Sbjct: 6 LVIGANGFLGSHVTRQL 22
>UNIPROTKB|C9JFU6 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00916816 ProteinModelPortal:C9JFU6 SMR:C9JFU6 STRING:C9JFU6
Ensembl:ENST00000444193 ArrayExpress:C9JFU6 Bgee:C9JFU6
Uniprot:C9JFU6
Length = 121
Score = 92 (37.4 bits), Expect = 0.00090, P = 0.00090
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 164 MKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWASSSSVYGLNKKIPFSEK--DRTDQ-- 219
M NP+ + +N G +N+L K + ++ AS+S VYG + P SE +
Sbjct: 1 MYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHPQSEDYWGHVNPIG 58
Query: 220 PSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGP 257
P + Y K+ E + + Y G+ + R F +GP
Sbjct: 59 PRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGP 96
>UNIPROTKB|F1RX12 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0070401 "NADP+ binding" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:CT961043 EMBL:CU302446 EMBL:CU682457
RefSeq:XP_003128195.3 Ensembl:ENSSSCT00000001084 GeneID:100520846
KEGG:ssc:100520846 Uniprot:F1RX12
Length = 350
Score = 113 (44.8 bits), Expect = 0.00092, P = 0.00092
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 131 GDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANP 190
GD+ DS L K+ N VK + + +L AQ+ V+ + + + G + LL+A KT
Sbjct: 63 GDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGL 122
Query: 191 QPAIIW--ASSSSVYGLNKKIPFSEKDRTD-QPSSLYAATKKAGEEIAHTYNHIYGL-SI 246
++ + AS+S +YG ++ P +K+ T P S Y A K I + Y L ++
Sbjct: 123 IGSVRFYQASTSELYGKVQETP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAV 180
Query: 247 TGLRF 251
G+ F
Sbjct: 181 NGILF 185
>UNIPROTKB|E2QVH4 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0005811 GO:GO:0008203 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 ProteinModelPortal:E2QVH4 Ensembl:ENSCAFT00000030435
Uniprot:E2QVH4
Length = 373
Score = 101 (40.6 bits), Expect = 0.00093, Sum P(3) = 0.00093
Identities = 44/179 (24%), Positives = 74/179 (41%)
Query: 133 INDSLLLEKLFNLVK-FSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEACKTANPQ 191
+ D + L+ +K S V H A+ + N + N G N++E CK A Q
Sbjct: 82 LGDLCSQQDLYPALKGVSTVFHCASPPP---SSNNKELFYRVNYIGTKNVIETCKEAGVQ 138
Query: 192 PAIIWASSSSVY-GLNKKIPFSEKDRTDQPSSLYAATKKAGEEIAHTYNHIYGLSIT-GL 249
I+ +S+S ++ G+N K + +P Y TK E N +T +
Sbjct: 139 KLILTSSASVIFEGVNIKNGTEDLPYAMKPIDYYTETKILQERAVLDANDPKRNFLTMAI 198
Query: 250 RFFTVYGPWGRPDMVYFFFTKNILKRKPVMIFEGPNHATVARDFTYIDDIVKGCLAALD 308
R ++GP P +V + MI G N DFT+++++V G + A +
Sbjct: 199 RPHGIFGPRD-PQLVPILIEAARKGKMKFMIGNGENLV----DFTFVENVVHGHILAAE 252
Score = 45 (20.9 bits), Expect = 0.00093, Sum P(3) = 0.00093
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 77 VTGAAGFVGTHVSAALRRRG 96
V G +GF+G H+ L RG
Sbjct: 42 VIGGSGFLGQHMVEQLLARG 61
Score = 43 (20.2 bits), Expect = 0.00093, Sum P(3) = 0.00093
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 369 FTHANVSLARRELGYKPTTNLQTGLKKFVR 398
F + + AR+ +GY+P + +++ V+
Sbjct: 335 FHYYSCERARKVMGYRPLVTMDDAIERTVQ 364
>UNIPROTKB|F1PED8 [details] [associations]
symbol:HSD3B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
OMA:MAGWSCL GO:GO:0006694 GeneTree:ENSGT00550000074557
EMBL:AAEX03011027 Ensembl:ENSCAFT00000015969 Uniprot:F1PED8
Length = 377
Score = 102 (41.0 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 40/141 (28%), Positives = 62/141 (43%)
Query: 66 PRSRAGGHIVLVTGAAGFVGTHVSAALRRRGDGVVGLDNFNDYYDTSLKRGRASLLERAG 125
P G LVTGA GF+G + L + + + + + L + L +
Sbjct: 1 PDLTMAGWSCLVTGAGGFLGQRIVHLLAEEKE-LQEIRALDKAFRPELLEEFSKLQSKTK 59
Query: 126 VFVVEGDINDSLLLEKLFNLVKFSHVMHLAAQAGVRYAMKNPMSYVNSNIAGFVNLLEAC 185
+ +VEGDI D L++ S V+H A+ V + + +N N+ G LLEAC
Sbjct: 60 LTMVEGDILDEQCLKRACQGT--SVVIHTASVIDVMNVIHRE-TIMNVNLKGTQLLLEAC 116
Query: 186 KTANPQPAIIWASSSSVYGLN 206
A+ P I+ S+ V G N
Sbjct: 117 AQASV-PIFIYTSTIEVAGPN 136
Score = 52 (23.4 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 368 LFTHANVSLARRELGYKPTTNLQTGLKKFVRW 399
+FT + A+R+LGYKP + + +K W
Sbjct: 330 IFTFS-YKKAQRDLGYKPLFSWEEAKQKTTEW 360
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 96 (38.9 bits), Expect = 0.00099, P = 0.00099
Identities = 36/139 (25%), Positives = 61/139 (43%)
Query: 164 MKNPMSYVNSNIAGFVNLLEACKTANPQPAIIWASSSSVYGLNKKIPFSEK--DRTDQ-- 219
M NP+ + +N G +N+L K + ++ AS+S VYG + P SE +
Sbjct: 1 MYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHPQSEDYWGHVNPIG 58
Query: 220 PSSLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPD--MVYFFFTKNILKRKP 277
P + Y K+ E + + Y G+ + R F +GP + V F L+ +P
Sbjct: 59 PRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEP 118
Query: 278 VMIFEGPNHATVARDFTYI 296
+ ++ G T R F Y+
Sbjct: 119 LTVY-GSGSQT--RAFQYV 134
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 413 354 0.00079 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 212
No. of states in DFA: 605 (64 KB)
Total size of DFA: 233 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.50u 0.19s 25.69t Elapsed: 00:00:02
Total cpu time: 25.54u 0.19s 25.73t Elapsed: 00:00:02
Start: Fri May 10 04:37:02 2013 End: Fri May 10 04:37:04 2013
WARNINGS ISSUED: 1