Query 015117
Match_columns 413
No_of_seqs 230 out of 1171
Neff 7.1
Searched_HMMs 13730
Date Mon Mar 25 07:00:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015117.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015117hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2dlqa4 g.37.1.1 (A:8-34) GLI- 63.9 0.95 6.9E-05 25.1 0.6 11 2-12 1-11 (27)
2 d1pw4a_ f.38.1.1 (A:) Glycerol 39.5 1.1E+02 0.0081 26.2 15.6 18 179-196 19-36 (447)
3 d1rutx4 g.39.1.3 (X:114-146) L 29.3 7.1 0.00052 22.6 0.5 13 3-15 1-13 (33)
4 d1ibia2 g.39.1.3 (A:145-175) C 29.3 6.4 0.00047 22.4 0.3 18 3-20 2-19 (31)
5 d1x61a2 g.39.1.3 (A:35-66) Thy 29.2 7.2 0.00052 22.5 0.5 10 4-13 2-11 (32)
6 d2csha2 g.37.1.1 (A:61-104) Zi 27.4 7.8 0.00057 23.9 0.5 13 1-13 5-17 (44)
7 d1rwja_ a.138.1.1 (A:) Cytochr 26.8 11 0.00082 26.9 1.4 24 2-25 30-53 (81)
8 d2epqa1 g.37.1.1 (A:380-411) P 22.5 11 0.00077 21.6 0.4 10 2-11 4-13 (32)
9 d1t2ya_ g.46.1.1 (A:) Metallot 17.6 16 0.0012 19.6 0.4 8 3-10 18-25 (26)
10 d1x6ea2 g.37.1.1 (A:41-66) Zin 16.3 19 0.0014 20.0 0.5 10 2-11 3-12 (26)
No 1
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=63.94 E-value=0.95 Score=25.09 Aligned_cols=11 Identities=36% Similarity=1.075 Sum_probs=8.9
Q ss_pred ccccccccccc
Q 015117 2 IECSVCHSTLE 12 (413)
Q Consensus 2 ~~~~~~~~~~~ 12 (413)
++|+.||++..
T Consensus 1 vqcp~c~k~f~ 11 (27)
T d2dlqa4 1 VECPTCHKKFL 11 (27)
T ss_dssp CCCTTTCCCCS
T ss_pred CcCcchHHHHH
Confidence 58999998754
No 2
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=39.46 E-value=1.1e+02 Score=26.22 Aligned_cols=18 Identities=11% Similarity=0.578 Sum_probs=10.3
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 015117 179 FSIIQWEALALLLIGISV 196 (413)
Q Consensus 179 ls~~qw~al~Ll~~GV~l 196 (413)
+.+.||.-+.++++|..+
T Consensus 19 ~~~~~w~i~~~~~~~~~~ 36 (447)
T d1pw4a_ 19 YRRLRWQIFLGIFFGYAA 36 (447)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHH
Confidence 344567666666665444
No 3
>d1rutx4 g.39.1.3 (X:114-146) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.33 E-value=7.1 Score=22.60 Aligned_cols=13 Identities=31% Similarity=0.652 Sum_probs=10.3
Q ss_pred ccccccccccccc
Q 015117 3 ECSVCHSTLELET 15 (413)
Q Consensus 3 ~~~~~~~~~~~~~ 15 (413)
.|+.||.++|...
T Consensus 1 tC~tC~n~LVPGD 13 (33)
T d1rutx4 1 TCSTCRNRLVPGD 13 (33)
T ss_dssp BCTTTCCBCCTTC
T ss_pred CcccccccccCCc
Confidence 4999999988653
No 4
>d1ibia2 g.39.1.3 (A:145-175) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=29.31 E-value=6.4 Score=22.42 Aligned_cols=18 Identities=33% Similarity=0.628 Sum_probs=14.9
Q ss_pred cccccccccccccCCCcc
Q 015117 3 ECSVCHSTLELETVGGKT 20 (413)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~ 20 (413)
.|..|++.+++.++.+|+
T Consensus 2 rca~cgk~lestt~adkd 19 (31)
T d1ibia2 2 RCAKCGKSLESTTLTEKE 19 (31)
T ss_dssp ECSSSCCEECSSCSEEET
T ss_pred ccccccCccccceeeccC
Confidence 699999999998876654
No 5
>d1x61a2 g.39.1.3 (A:35-66) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.19 E-value=7.2 Score=22.51 Aligned_cols=10 Identities=40% Similarity=0.896 Sum_probs=8.3
Q ss_pred cccccccccc
Q 015117 4 CSVCHSTLEL 13 (413)
Q Consensus 4 ~~~~~~~~~~ 13 (413)
|.+||+|+.-
T Consensus 2 C~tC~~kLRG 11 (32)
T d1x61a2 2 CSTCRAQLRG 11 (32)
T ss_dssp CSSSCCBCTT
T ss_pred eeEeCceecC
Confidence 8999999754
No 6
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.44 E-value=7.8 Score=23.92 Aligned_cols=13 Identities=23% Similarity=0.664 Sum_probs=9.8
Q ss_pred Ccccccccccccc
Q 015117 1 MIECSVCHSTLEL 13 (413)
Q Consensus 1 ~~~~~~~~~~~~~ 13 (413)
..||+.|++|..-
T Consensus 5 PYeC~~C~KrFMW 17 (44)
T d2csha2 5 PYECNICAKRFMW 17 (44)
T ss_dssp CEECSSSCCEESC
T ss_pred ceeccchhhhhhh
Confidence 3689999988643
No 7
>d1rwja_ a.138.1.1 (A:) Cytochrome c7 (cytochrome c551.5, PpcA) {Geobacter sulfurreducens, GSU1996 [TaxId: 35554]}
Probab=26.76 E-value=11 Score=26.93 Aligned_cols=24 Identities=29% Similarity=0.502 Sum_probs=16.8
Q ss_pred ccccccccccccccCCCccccccc
Q 015117 2 IECSVCHSTLELETVGGKTVSRAY 25 (413)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~ 25 (413)
..|..||.+|-....+++.+.-|.
T Consensus 30 ~~C~~CH~~iF~~~~~~~~~tMa~ 53 (81)
T d1rwja_ 30 YKCNECHTKLFAYKAGAKRFTMAD 53 (81)
T ss_dssp CCGGGTBTTTBCSSTTSSCCCHHH
T ss_pred CCccccchhhcccCCCCCcccHHH
Confidence 579999999876655555555443
No 8
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.54 E-value=11 Score=21.56 Aligned_cols=10 Identities=30% Similarity=0.820 Sum_probs=8.2
Q ss_pred cccccccccc
Q 015117 2 IECSVCHSTL 11 (413)
Q Consensus 2 ~~~~~~~~~~ 11 (413)
.+|.+|+.+.
T Consensus 4 ~~cpic~qrf 13 (32)
T d2epqa1 4 YSCPVCGLRF 13 (32)
T ss_dssp SEETTTTEEC
T ss_pred cccchHHHHh
Confidence 5899999874
No 9
>d1t2ya_ g.46.1.1 (A:) Metallothionein {Neurospora crassa [TaxId: 5141]}
Probab=17.56 E-value=16 Score=19.59 Aligned_cols=8 Identities=50% Similarity=1.003 Sum_probs=6.2
Q ss_pred cccccccc
Q 015117 3 ECSVCHST 10 (413)
Q Consensus 3 ~~~~~~~~ 10 (413)
.||.|+||
T Consensus 18 scsncgsk 25 (26)
T d1t2ya_ 18 SCSNCGSK 25 (26)
T ss_dssp CSSTTSCC
T ss_pred cccccccC
Confidence 58888876
No 10
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.26 E-value=19 Score=19.99 Aligned_cols=10 Identities=20% Similarity=0.693 Sum_probs=7.7
Q ss_pred cccccccccc
Q 015117 2 IECSVCHSTL 11 (413)
Q Consensus 2 ~~~~~~~~~~ 11 (413)
.||+.|++..
T Consensus 3 y~C~eCgK~F 12 (26)
T d1x6ea2 3 YKCLECGKAF 12 (26)
T ss_dssp EECSSSCCEE
T ss_pred ccCCCCcCee
Confidence 5899998754
Done!