Query 015118
Match_columns 413
No_of_seqs 114 out of 581
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 07:01:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015118.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015118hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4epl_A Jasmonic acid-amido syn 100.0 3E-103 1E-107 825.8 23.6 405 1-412 7-415 (581)
2 4eql_A 4-substituted benzoates 100.0 2.8E-99 9E-104 797.5 21.3 400 1-412 7-408 (581)
3 4b2g_A GH3-1 auxin conjugating 100.0 2.1E-99 7E-104 799.8 19.5 404 2-412 11-420 (609)
4 2y27_A Phenylacetate-coenzyme 99.5 3.4E-14 1.2E-18 144.4 13.4 91 21-119 20-118 (437)
5 2y4o_A Phenylacetate-coenzyme 99.5 3.5E-14 1.2E-18 144.6 12.9 92 21-119 22-120 (443)
6 3qov_A Phenylacetate-coenzyme 99.5 7.1E-14 2.4E-18 142.0 12.4 92 22-119 17-114 (436)
7 3hgu_A EHPF; phenazine, antibi 99.4 2.4E-12 8.1E-17 127.9 15.2 85 27-118 22-118 (369)
8 3ivr_A Putative long-chain-fat 98.3 1.3E-06 4.3E-11 90.1 9.3 97 293-412 272-385 (509)
9 3e7w_A D-alanine--poly(phospho 98.2 8.1E-06 2.8E-10 84.2 13.4 40 290-333 257-299 (511)
10 3etc_A AMP-binding protein; ad 98.2 3.6E-06 1.2E-10 88.6 10.3 97 292-412 340-462 (580)
11 2d1s_A Luciferase, luciferin 4 98.2 6.4E-06 2.2E-10 85.9 11.9 99 292-412 308-428 (548)
12 3l8c_A D-alanine--poly(phospho 98.1 3.2E-06 1.1E-10 87.3 8.0 30 88-118 143-172 (521)
13 3fce_A D-alanine--poly(phospho 98.1 1.2E-05 4.2E-10 82.8 12.0 40 291-334 259-301 (512)
14 4fuq_A Malonyl COA synthetase; 98.1 1.5E-05 5.2E-10 82.1 12.0 30 89-119 154-183 (503)
15 1t5h_X 4-chlorobenzoyl COA lig 98.1 1.3E-05 4.5E-10 82.4 10.5 29 89-118 152-180 (504)
16 3rix_A Luciferase, luciferin 4 98.0 2.4E-05 8.1E-10 81.5 11.2 99 292-412 306-426 (550)
17 3ni2_A 4-coumarate:COA ligase; 98.0 2.1E-05 7E-10 81.7 10.6 99 292-412 296-421 (536)
18 3g7s_A Long-chain-fatty-acid-- 98.0 2.1E-05 7.2E-10 81.9 10.7 29 90-119 180-208 (549)
19 1mdb_A 2,3-dihydroxybenzoate-A 97.9 2.3E-05 7.9E-10 81.4 9.5 30 89-119 181-210 (539)
20 3nyq_A Malonyl-COA ligase; A/B 97.9 4E-05 1.4E-09 79.1 10.3 32 89-121 154-185 (505)
21 3o83_A Peptide arylation enzym 97.8 3.5E-05 1.2E-09 80.2 8.3 32 89-121 190-221 (544)
22 3ite_A SIDN siderophore synthe 97.8 0.00011 3.9E-09 76.4 12.0 32 90-122 175-206 (562)
23 3kxw_A Saframycin MX1 syntheta 97.8 6.1E-05 2.1E-09 78.7 9.7 30 89-119 166-195 (590)
24 2v7b_A Benzoate-coenzyme A lig 97.8 5.9E-05 2E-09 78.0 9.1 95 294-412 301-416 (529)
25 3r44_A Fatty acyl COA syntheta 97.7 9.1E-05 3.1E-09 76.5 9.8 30 89-119 169-198 (517)
26 3c5e_A Acyl-coenzyme A synthet 97.7 9.8E-05 3.3E-09 77.4 10.0 27 89-116 205-231 (570)
27 3tsy_A Fusion protein 4-coumar 97.7 0.00013 4.3E-09 81.4 11.2 99 292-412 343-468 (979)
28 3rg2_A Enterobactin synthase c 97.7 0.00011 3.6E-09 77.8 9.7 30 89-119 183-212 (617)
29 3gqw_A Fatty acid AMP ligase; 97.7 0.00014 4.9E-09 75.4 10.2 29 89-118 175-203 (576)
30 1ry2_A Acetyl-coenzyme A synth 97.6 0.00023 7.9E-09 76.1 11.2 27 89-116 261-287 (663)
31 1amu_A GRSA, gramicidin synthe 97.6 0.00019 6.5E-09 75.1 10.3 29 89-118 181-209 (563)
32 4gr5_A Non-ribosomal peptide s 97.6 8.6E-05 2.9E-09 77.7 7.5 27 89-116 213-239 (570)
33 1pg4_A Acetyl-COA synthetase; 97.6 0.0003 1E-08 74.9 11.4 27 89-116 255-281 (652)
34 4gs5_A Acyl-COA synthetase (AM 97.4 0.00019 6.4E-09 70.9 7.2 26 93-119 40-65 (358)
35 3t5a_A Long-chain-fatty-acid-- 97.4 0.00079 2.7E-08 68.1 12.1 30 89-119 182-211 (480)
36 4dg8_A PA1221; ANL superfamily 97.4 0.00033 1.1E-08 74.3 9.4 27 89-116 163-189 (620)
37 3ipl_A 2-succinylbenzoate--COA 97.4 0.00034 1.2E-08 71.6 8.8 29 89-118 162-190 (501)
38 1v25_A Long-chain-fatty-acid-C 97.1 0.0019 6.5E-08 66.9 10.6 27 89-116 175-201 (541)
39 2vsq_A Surfactin synthetase su 96.6 0.0057 1.9E-07 70.3 10.3 28 88-116 605-632 (1304)
40 3isy_A Bsupi, intracellular pr 30.6 21 0.00072 29.4 1.8 26 384-409 37-64 (120)
41 2m0n_A Putative uncharacterize 29.1 88 0.003 25.4 5.2 53 231-284 42-100 (112)
42 3ol3_A Putative uncharacterize 27.0 79 0.0027 25.4 4.6 53 231-284 45-100 (107)
No 1
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=100.00 E-value=3.3e-103 Score=825.77 Aligned_cols=405 Identities=65% Similarity=1.096 Sum_probs=374.2
Q ss_pred CcccccccChHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHHHHhcCCCCC-CCcc-cccccccceecCCchhhHhhh
Q 015118 1 MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGR-TDPE-SFKSCVPLVTHEDLQPYIQRI 78 (413)
Q Consensus 1 ~~~~~~~~~~~~~~~~f~~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~I-~t~e-dFr~~vPi~~Yed~~pyi~r~ 78 (413)
|+|||+..++++.++.|++.|+||.++|+++|++||++|++|+|||+|||++| +|++ |||++|||++|||++||||||
T Consensus 7 ~~~~~~~~~~~~~~~~~e~~~~~~~~vQ~~vL~~iL~~n~~Teygk~~gf~~i~~~~e~dF~~~VPi~~Yedl~pyIeRi 86 (581)
T 4epl_A 7 MLEKVETFDMNRVIDEFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNATDPEEAFKSMVPLVTDVELEPYIKRM 86 (581)
T ss_dssp ------CCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCHHHHTTTCC----CHHHHHHHHSCCBCHHHHHHHHHHH
T ss_pred hhhcccccccHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCHHHHhcCCCcccCCHHHHHHHhCCCccHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999 9999 999999999999999999999
Q ss_pred ccCCCCCcccCCCcceeecccccCCCCcccccCchHHHHHHHHHHHHhhhhcccccc-cC-CCceeEEEeccceeeecCC
Q 015118 79 IDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IG-KGKALQFIYGSKQSKTKGG 156 (413)
Q Consensus 79 ~~Ge~~~vl~~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~~~~~~~~~~~~~~~~~p-~~-~gk~l~~~~~~~~~~t~~G 156 (413)
++||.++|||++||.+|++|||||+|++|+||+|+++++.+++++..|..++++ +| +. .||+|+|++++++.+|++|
T Consensus 87 ~~Ge~~~iL~~~pi~~f~~SSGTT~gk~K~IP~T~~~l~~~~~~~~~~~~~~~~-~p~l~~~Gk~L~l~~~s~~~~t~~G 165 (581)
T 4epl_A 87 VDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNR-DFPIDDNGKALQFIFSSKQYISTGG 165 (581)
T ss_dssp HTTCCSSSSSSSCCSEEEEEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHH-HSCCCTTCEEEEECCCCCCEECTTS
T ss_pred HCCCCCCccCCCCcceEEecCCCCCCCccccccCHHHHHHHHHHHHHHHHHHhh-CCccccCCcEEEEeecCCcccCCCC
Confidence 999978999999999999999999999999999999999987777777777766 66 87 8999998889999999999
Q ss_pred cceeccccceecChhhHHHHHHHhcCCCCCCeeEeCCchhhhHHHHHhhhccccccchhhhhhhhhHHHHHHHhHHHHHH
Q 015118 157 LNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWE 236 (413)
Q Consensus 157 ip~g~~S~~~~~~~~f~~~p~~~~~~~~~P~~v~~~~d~~~~~Y~~ll~aL~~~~~l~~i~~~~~~~l~~~~~~le~~w~ 236 (413)
+|+|++|++.+++.+|+.+|.++...|++|.+++.++|..+++||||||||+++++|.+|+++||++|+.+++.|+++|+
T Consensus 166 i~~G~~S~~~~~s~~f~~~p~~~~~~~t~P~e~i~~~D~~~~~Y~~Ll~~L~~~~~v~~i~a~fas~ll~~~~~l~~~We 245 (581)
T 4epl_A 166 VPVGTATTNVYRNPNFKAGMKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWE 245 (581)
T ss_dssp CEEECHHHHHHTSTTHHHHHGGGSCCBSSCHHHHTCSCHHHHHHHHHHHHHHTGGGEEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred ceeeechhhhhhcchhhcCchhhhhcccCCHHHhcCCCHHHHHHHHHHHhhhccccccEEeeccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccccccchhHHHHHHHhhcCCChHhHHHHHHHhccCccccccccccCCCcceeeeeccchhhHHHHHhhhh
Q 015118 237 ELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316 (413)
Q Consensus 237 ~l~~dI~~Gt~~~~~~~~~~r~~l~~~l~~~p~rA~~L~~~~~~~~g~~gi~~~lWP~L~~i~~~~~g~~~~y~~~l~~~ 316 (413)
++|+||++|+++++++++++|++|+++|+|+|++|++|+++|++.+.|+|++++|||||++|.||++|+|++|+++|++|
T Consensus 246 ~l~~dI~~gtl~~~it~~~~R~~l~~v~~p~~~~a~~l~~~~~~~~~~~g~i~~lWPnl~~i~~~~~G~~~~Y~~~l~~~ 325 (581)
T 4epl_A 246 EIVTDIKDGVLSNRITVPSVRTAMSKLLTPNPELAETIRTKCMSLSNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHY 325 (581)
T ss_dssp HHHHHHHHTCCCTTCCCHHHHHHHHTTCCCCHHHHHHHHHHHHHSSTTTTHHHHHCTTCCCEEEECSGGGGGGHHHHHHH
T ss_pred HHHHHHHhcCCCcCCCCHHHHHHHhCCCCCCHHHHHHHHHHhCCCCccccCHHHhCCCCceEEEEeCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987213889999999999999999999999999999999
Q ss_pred cCCCCceecccCCCccccccccCCCCCCcceeeeeecCCceeeeeeccccCCCCcccccCCccccceeeeecceEEEEEe
Q 015118 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396 (413)
Q Consensus 317 ~~~vpi~~~~Y~aSEg~i~i~~~~~~~~~~~~~~l~p~~~ffEFip~~~~e~~~~~~~~~~~~l~~~ele~G~~YelVvT 396 (413)
+|++|+++.+|+||||+||||+++.++++..+|+|+|+.+||||||++ +.++ +++++++++|||+|++||||||
T Consensus 326 ~g~~p~~~~~Y~ASEg~~gi~~~p~~~~~~~~~~L~p~~~ffEFiP~~--~~~~----~~~~~v~l~eve~G~~YelviT 399 (581)
T 4epl_A 326 AGDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEFLPVS--ETGE----GEEKPVGLTQVKIGEEYEVVIT 399 (581)
T ss_dssp HTTSCEEECCEEETTEEEEECCCTTSCTTTCCEEECTTSCEEEEEEC-------------CCCEEGGGCCTTCEEEEEEE
T ss_pred cCCCccccCceeccceeeeeecCCCCCccccceeecCCcEEEEEEecc--cccC----CCCceeeHHHcCCCCeEEEEEe
Confidence 999999999999999999999999998877889999999999999988 6554 5789999999999999999999
Q ss_pred eccceeeeeeccceec
Q 015118 397 NVAGMKMSYTNNFLIA 412 (413)
Q Consensus 397 t~~GLyRY~~gDvv~~ 412 (413)
|.+|||||++||+|++
T Consensus 400 t~~GL~RYr~GD~v~v 415 (581)
T 4epl_A 400 NYAGLYRYRLGDVVKV 415 (581)
T ss_dssp STTSCSSEEEEEEEEE
T ss_pred eccceeeEEcCCEEEE
Confidence 9999999999999986
No 2
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=100.00 E-value=2.8e-99 Score=797.55 Aligned_cols=400 Identities=36% Similarity=0.653 Sum_probs=374.1
Q ss_pred CcccccccChHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHHHHhcCCCCCCCcccccccccceecCCchhhHhhhcc
Q 015118 1 MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIID 80 (413)
Q Consensus 1 ~~~~~~~~~~~~~~~~f~~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~I~t~edFr~~vPi~~Yed~~pyi~r~~~ 80 (413)
|+|+++. +++.++.|++.|+||.++|+++|++||++|++|+|||+| |++|++++|||++|||++|||++|||||+++
T Consensus 7 ~~~~~~~--~~~~~~~~e~~~~~~~~vQ~~vL~~iL~~n~~Teygk~~-f~~i~~~~~F~~~VPi~~Yedl~pyIeRi~~ 83 (581)
T 4eql_A 7 MKPIFDI--NETFEKQLKDLTSNVKSIQDNLLEEIITPNTKTEYLQRF-LIDRFDKELFKKNVPIVSYEDIKPYLDRVVN 83 (581)
T ss_dssp ---------CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHTTSHHHHHT-TCCSCCHHHHHHHSCCBCHHHHHHHHHHHHT
T ss_pred cccccCC--cHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccCHHHHHH-hhcCCCHHHHHHhCCCccHHHHHHHHHHHHc
Confidence 5665543 467889999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCCCcccCCCcceeecccccCCCCcccccCchHHHHHHHHHHHHhhhhcccccc-cCCCceeEEEeccceeeecCCcce
Q 015118 81 GDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNA 159 (413)
Q Consensus 81 Ge~~~vl~~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~~~~~~~~~~~~~~~~~p-~~~gk~l~~~~~~~~~~t~~Gip~ 159 (413)
||.++|||++||.+|++|||||+|++|+||+|+++++.+++++..|..++++++| +..||.|++.+.+....|++|+|+
T Consensus 84 Ge~~~iL~~~pi~~F~~SSGTT~g~~K~IP~T~e~l~~~~~~~~~~~~~~~~~~p~~~~Gk~l~l~~~~~~~~t~~G~~~ 163 (581)
T 4eql_A 84 GESSDVISARTITGFLLSSGTSGGAQKMMPWNNKYLDNLTFIYDLRMQVITKHVKGVEEGKGMMFLFTKQESMTPSGLPA 163 (581)
T ss_dssp TCCGGGTCSSCCCEEEEEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCSCTTSEEEECCCCCCCEECTTSCEE
T ss_pred CCCCcccCCCCCCeEEeCCCCCCCCccccccCHHHHHHHHHHHHHHHHHHHhcCCccccCCEEEEeccCCcccCCCCeee
Confidence 9966999999999999999999899999999999999988888999999999999 888999998887778899999999
Q ss_pred eccccceecChhhHHHHHHHhcCCCCCCeeEeCCchhhhHHHHHhhhccccccchhhhhhhhhHHHHHHHhHHHHHHHHH
Q 015118 160 GTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239 (413)
Q Consensus 160 g~~S~~~~~~~~f~~~p~~~~~~~~~P~~v~~~~d~~~~~Y~~ll~aL~~~~~l~~i~~~~~~~l~~~~~~le~~w~~l~ 239 (413)
|++|++++++.+|+.+|......|++|.+++.++|..+++||||||||.++++|+.|+++|+++++++++.|+++|+++|
T Consensus 164 g~~s~~~~~~~~f~~~p~~~~~~~~~P~~~i~~~d~~~~~Y~~ll~~L~~~~~v~~isa~fa~~ll~~~~~L~~~weel~ 243 (581)
T 4eql_A 164 RVATSSYFKSDYFKNRPSNWYYSYTSPDEVILCPNNTESLYCHLLCGLVQRDEVVRTGSIFASVMVRAIEVLKNSWEELC 243 (581)
T ss_dssp ECHHHHHHTSHHHHTCCCSGGGCBSSCHHHHHCSCHHHHHHHHHHHHHHTGGGEEEEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhhcchhhcccchhhhcccCchHhhcCCCHHHHHHHHHHHHhhcccccceeeehhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988877555678999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCccccccchhHHHHHHHhhcC-CChHhHHHHHHHhccCccccccccccCCCcceeeeeccchhhHHHHHhhhhcC
Q 015118 240 DDIREGVLSSRITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG 318 (413)
Q Consensus 240 ~dI~~Gt~~~~~~~~~~r~~l~~~l~-~~p~rA~~L~~~~~~~~g~~gi~~~lWP~L~~i~~~~~g~~~~y~~~l~~~~~ 318 (413)
+||++|+++++++++++|.++...++ |||+||++|+++|++. +|.|++++|||||++|.||++|+|++|+++|++|+|
T Consensus 244 ~dI~~gtl~~~it~~~~r~~~~~~L~~P~p~~A~~l~~~~~~~-~~~g~i~~lWPnl~~l~~~~~G~~~~Y~~~l~~~~g 322 (581)
T 4eql_A 244 SNIRSGHLSNWVTDLGCQNSVSLVLGGPRPELADTIEEICNQN-SWKGIVKRLWPNTKYIETVVTGSMGQYVPMLNYYCN 322 (581)
T ss_dssp HHHHHTCCCTTCCCHHHHHHHHHHHCSCCHHHHHHHHHHHTSS-CCTTHHHHHSTTCCEEEEECSGGGGGGHHHHHHHHT
T ss_pred HHHHhCCCcccCcChHHHHHHHHHhcCCCHHHHHHHHHHhcCC-CccCCHHHhCCCCcEEEEEcCCChHHHHHHHHHHcC
Confidence 99999999999999999999999997 9999999999999984 588999999999999999999999999999999999
Q ss_pred CCCceecccCCCccccccccCCCCCCcceeeeeecCCceeeeeeccccCCCCcccccCCccccceeeeecceEEEEEeec
Q 015118 319 DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV 398 (413)
Q Consensus 319 ~vpi~~~~Y~aSEg~i~i~~~~~~~~~~~~~~l~p~~~ffEFip~~~~e~~~~~~~~~~~~l~~~ele~G~~YelVvTt~ 398 (413)
++|+++++|+||||+||||+++.|+++..+|+|+|+.+||||||++ +. ++|+++.++|||+|++|||||||.
T Consensus 323 ~~p~~~~~Y~ASEg~~gi~~~p~~~~~~~~~~L~~~~~ffEFip~~--~~------~~~~~v~l~eVe~G~~YelViTt~ 394 (581)
T 4eql_A 323 DLPLVSTTYGSSETTFGINLDPLCKPEDVSYTFMPNMSYFEFIPMD--GG------DKNDVVDLEDVKLGCTYEPVVTNF 394 (581)
T ss_dssp TCCEECCEEECSSCEEEECSCTTSCGGGCCEEECTTSSEEEEEECS--TT------CCSSCEEGGGCCTTCEEEEEEECS
T ss_pred CCccccCccccccceeeeccCCCCCcccCceeecCCcEEEEEEecc--cc------CCCcEeCHHHcCCCceEEEEEeec
Confidence 9999999999999999999999998877789999999999999988 54 367899999999999999999999
Q ss_pred cceeeeeeccceec
Q 015118 399 AGMKMSYTNNFLIA 412 (413)
Q Consensus 399 ~GLyRY~~gDvv~~ 412 (413)
+|||||++||+|++
T Consensus 395 ~GL~RYr~GD~v~v 408 (581)
T 4eql_A 395 AGLYRMRVGDIVLV 408 (581)
T ss_dssp SSCCSEECCEEEEE
T ss_pred cceeeEEcCCEEEE
Confidence 99999999999986
No 3
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=100.00 E-value=2.1e-99 Score=799.78 Aligned_cols=404 Identities=38% Similarity=0.662 Sum_probs=380.8
Q ss_pred cccccccChHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHHHHhcCCCCCCCcccccccccceecCCchhhHhhhccC
Q 015118 2 LEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81 (413)
Q Consensus 2 ~~~~~~~~~~~~~~~f~~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~I~t~edFr~~vPi~~Yed~~pyi~r~~~G 81 (413)
++++...++++.++.|++.|+||.++|+++|++||++|++|+|||+|||++|+|++||+++|||++|||++||||||++|
T Consensus 11 ~~~~~~~~~~~~l~~~e~~~~~~~~~Q~~~L~~lL~~~~~T~~gr~~gf~~i~~~~dF~~~VPv~~Yedl~p~ieRi~~G 90 (609)
T 4b2g_A 11 LGPAASEKDAKALQFIEEMTRNADSVQERVLAEILSRNGETEYLKRFKLEGSTVRETFKSKIPVIKYEDLQPEIQRIANG 90 (609)
T ss_dssp -----CHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHSTTSHHHHTTCCTTCCSHHHHHHHSCCBCHHHHHHHHHHHHTT
T ss_pred hhhhcccchHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCChHHHhcCCCCCCCHHHHHHhCCCccHHHHHHHHHHHhcC
Confidence 45667778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCcceeecccccCCCCcccccCchHHHHHHHHHHHHhhhhcccccc-cCCCceeEEEeccceeeecCCccee
Q 015118 82 DISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAG 160 (413)
Q Consensus 82 e~~~vl~~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~~~~~~~~~~~~~~~~~p-~~~gk~l~~~~~~~~~~t~~Gip~g 160 (413)
|.++|||++||.+|++|||||+|++|+||+|+++++.+++++..|..++++++| +..||.|+|.+++....|++|+|+|
T Consensus 91 e~~~il~~~~i~~f~~SSGTT~gk~K~IP~t~~~l~~~~~~~~~~~~~~~~~~p~~~~Gk~l~l~~~~~~~~t~~Gi~~g 170 (609)
T 4b2g_A 91 DRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQMLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETRTPGGLLAR 170 (609)
T ss_dssp CCSSSSCSSCCCEEEEEEEEETTEEEEEEECTTHHHHHHHHHHHHHHHHHHHSCCGGGSEEEECCCCCCCEECTTSCEEE
T ss_pred CCCCccCCCCCCeEEeCCCCCCCCceeeecCHHHHHHHHHHHHHHHHHHHhcCCcccCCCeEEEcccCCcccCCCCcccc
Confidence 966999999999999999999999999999999999988888999999999999 7889999987888888999999999
Q ss_pred ccccceecChhhHHHHHHHhcCCCCCCeeEeCCchhhhHHHHHhhhccccccchhhhhhhhhHHHHHHHhHHHHHHHHHH
Q 015118 161 TATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCD 240 (413)
Q Consensus 161 ~~S~~~~~~~~f~~~p~~~~~~~~~P~~v~~~~d~~~~~Y~~ll~aL~~~~~l~~i~~~~~~~l~~~~~~le~~w~~l~~ 240 (413)
++|++++++.+|+.+|......|++|.+++.++|..+++||||||||+++++|+.|+++|+++++++++.|+++|++||+
T Consensus 171 ~~s~~~~~s~~f~~~p~~~~~~~~sP~~~i~~~D~~~~~Y~~Ll~~L~~~~~v~~lsa~fa~~ll~~~~~L~~~Weel~~ 250 (609)
T 4b2g_A 171 PVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYTQMLCGIYERKQVLRLGAVFASGLLRAIRFLQLNWHQLTH 250 (609)
T ss_dssp CHHHHHHTSHHHHTCCCCTTCCBSSCHHHHHCSCHHHHHHHHHHHHHHTGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhccchhhccccchhhcccCcHHHhcCcCHHHHHHHHHHHHhhcccccceeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988887765456789999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCccccccchhHHHHHHHhhcCCChHhHHHHHHHhccCccccccccccCCCcceeeeeccchhhHHHHHhhhhcCCC
Q 015118 241 DIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDL 320 (413)
Q Consensus 241 dI~~Gt~~~~~~~~~~r~~l~~~l~~~p~rA~~L~~~~~~~~g~~gi~~~lWP~L~~i~~~~~g~~~~y~~~l~~~~~~v 320 (413)
||++|+++++++++++|.+|+++|+|+|++|++|+++|++. +|.|++++|||||++|.||++|+|++|+++|++|+|++
T Consensus 251 dI~~gtl~~~it~~~~r~a~~~~lsp~~~la~~l~~~~~~~-~~~g~i~~lWPnlk~l~~~~tG~~~~Y~~~l~~~~g~~ 329 (609)
T 4b2g_A 251 DIRTGTLSPKITDPSVRNCVAGVLKPDPELADLVAGECSKD-NWEGIITRIWPNTKYLDVIVTGAMAQYIPTLDYYSGGL 329 (609)
T ss_dssp HHHHTCCCTTCCCHHHHHHTTTTCCCCHHHHHHHHHHHTSS-CCTTTHHHHSTTCCEEEEECSGGGGGGHHHHHHHHTSC
T ss_pred HHHhccCCcCCCCHHHHHHHhcCCCcCHHHHHHHHHHhCCC-ccccCHHHhCCCCcEEEEEccCChHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999985 68999999999999999999999999999999999999
Q ss_pred CceecccCCCccccccccCCCCCCcceeeeeecCCceeeeeeccccCC-----CCcccccCCccccceeeeecceEEEEE
Q 015118 321 PLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL-----ESQVLCIEPKPVGLTEVKVGEEYEIIV 395 (413)
Q Consensus 321 pi~~~~Y~aSEg~i~i~~~~~~~~~~~~~~l~p~~~ffEFip~~~~e~-----~~~~~~~~~~~l~~~ele~G~~YelVv 395 (413)
|+++.+|+||||+||+|+++.|+++..+|+|+|+.+||||||++ +. +. ++|++|+++|||+|++|||||
T Consensus 330 p~~~~~Y~ASEg~~gi~~~p~~~p~~~~~~L~p~~~ffEFIP~~--~~~~~~~~~----~~~~~v~l~eVe~G~~YelVi 403 (609)
T 4b2g_A 330 PLACTMYASSECYFGLNLNPMSKPSEVSYTIMPNMAYFEFLPHE--HSSIPLSRD----SPPRLVDLAHVEVGKEYELVI 403 (609)
T ss_dssp CEECCEEECSSCEEEECSCTTSCGGGCCEEECTTSCEEEEEEGG--GTTSCCCSS----SCCCCEEGGGCCTTCEEEEEE
T ss_pred ccccCcccccceeeeeecCCCCCcccCceeecCCcEEEEEEecc--ccccccccC----CCCccccHhHcCCCCeEEEeh
Confidence 99999999999999999999998887899999999999999998 64 33 578999999999999999999
Q ss_pred eeccceeeeeeccceec
Q 015118 396 TNVAGMKMSYTNNFLIA 412 (413)
Q Consensus 396 Tt~~GLyRY~~gDvv~~ 412 (413)
||.+|||||++||+|++
T Consensus 404 Tt~~GL~RYr~GD~v~v 420 (609)
T 4b2g_A 404 TTYAGLYRYRVGDILRV 420 (609)
T ss_dssp ECTTSCCSEEEEEEEEE
T ss_pred hhhhhhhheecCCEEEE
Confidence 99999999999999986
No 4
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=99.54 E-value=3.4e-14 Score=144.39 Aligned_cols=91 Identities=22% Similarity=0.319 Sum_probs=68.9
Q ss_pred hhhHHHHHHHHHHHHHHh-cccHHHHHhc----CC--CCCCCcccccccccceecCCchhhHh-hhccCCCCCcccCCCc
Q 015118 21 TKDAERIQRETLRKILEE-NASAEYLQNL----GL--NGRTDPESFKSCVPLVTHEDLQPYIQ-RIIDGDISPILTGKPI 92 (413)
Q Consensus 21 ~~~~~~~Q~~~L~~iL~~-~~~T~ygr~~----gf--~~I~t~edFr~~vPi~~Yed~~pyi~-r~~~Ge~~~vl~~~pv 92 (413)
.++.++.|.+.|+.+|+. .+++.|++++ |+ ..|.+++||+ ++|+++|+++..... .+. -..++.+
T Consensus 20 ~~~~~~~~~~~l~~~l~~a~~~~~~y~~~~~~~~~~~~~i~~~~dl~-~lP~~~~~~l~~~~~~~~~------~~~~~~~ 92 (437)
T 2y27_A 20 RDELTALQLERLKWSLRHAYDHSPVYRRKFDEAGVHPDDLKTLADLS-RFPFTTKGDLRDSYPFGMF------AVPQDRI 92 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTCCGGGCSSGGGGG-GSCCBCHHHHHHTTTTTTC------SSCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCCHHHHHhcCCCccc------cCChhHe
Confidence 345778999999999986 6788998886 44 3588999999 699999999864321 111 1123445
Q ss_pred ceeecccccCCCCcccccCchHHHHHH
Q 015118 93 TTISRSSGTTQGKPKFLPFNDELMETT 119 (413)
Q Consensus 93 ~~f~~TSGTT~G~~K~IP~T~~~~~~~ 119 (413)
.+...||||| |+||-+++|.+.+...
T Consensus 93 ~~i~~TSGTT-G~PK~v~~t~~~~~~~ 118 (437)
T 2y27_A 93 SRIHASSGTT-GKPTVVGYTAADIDTW 118 (437)
T ss_dssp CEEEECCCTT-SSCCEEEECHHHHHHH
T ss_pred EEEEECCCCC-CCceEEecCHHHHHHH
Confidence 6788999999 9999999999986543
No 5
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=99.53 E-value=3.5e-14 Score=144.57 Aligned_cols=92 Identities=21% Similarity=0.293 Sum_probs=69.2
Q ss_pred hhhHHHHHHHHHHHHHHh-cccHHHHHhc----CC--CCCCCcccccccccceecCCchhhHhhhccCCCCCcccCCCcc
Q 015118 21 TKDAERIQRETLRKILEE-NASAEYLQNL----GL--NGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPIT 93 (413)
Q Consensus 21 ~~~~~~~Q~~~L~~iL~~-~~~T~ygr~~----gf--~~I~t~edFr~~vPi~~Yed~~pyi~r~~~Ge~~~vl~~~pv~ 93 (413)
..+.++.|.+.|+.+|+. .+++.|++++ |+ ..|.+++||+ ++|+++|+++...... +- .-..++.+.
T Consensus 22 ~~~~~~~q~~~l~~~l~~a~~~~~~y~~~~~~~~~~~~~i~~~~dl~-~lP~~~~~~l~~~~p~---~~--~~~~~~~~~ 95 (443)
T 2y4o_A 22 RDELQALQLERLKWSLRHAYDNVPHYRRTFDAAGVHPDDLKSLADLA-KFPFSTKNDLRDNYPF---GL--FAVPREQVV 95 (443)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTCCGGGCCSGGGGG-GSCCBCHHHHHTTTTT---TT--CSSCGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCcHHHHHhhCCC---cc--cCCChhheE
Confidence 345678999999999996 5889999886 44 3688999998 7999999998643210 10 111234456
Q ss_pred eeecccccCCCCcccccCchHHHHHH
Q 015118 94 TISRSSGTTQGKPKFLPFNDELMETT 119 (413)
Q Consensus 94 ~f~~TSGTT~G~~K~IP~T~~~~~~~ 119 (413)
+...||||| |+||-+++|.+.+...
T Consensus 96 ~i~~TSGTT-G~PK~v~~t~~~~~~~ 120 (443)
T 2y4o_A 96 RVHASSGTT-GKPTVVGYTARDIDTW 120 (443)
T ss_dssp EEEEECCSS-SSCEEEEECHHHHHHH
T ss_pred EEEECCCCC-CCceEEecCHHHHHHH
Confidence 788999999 9999999999886543
No 6
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=99.50 E-value=7.1e-14 Score=142.00 Aligned_cols=92 Identities=20% Similarity=0.326 Sum_probs=69.1
Q ss_pred hhHHHHHHHHHHHHHHhcccHHHHHhc----CCC--CCCCcccccccccceecCCchhhHhhhccCCCCCcccCCCccee
Q 015118 22 KDAERIQRETLRKILEENASAEYLQNL----GLN--GRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTI 95 (413)
Q Consensus 22 ~~~~~~Q~~~L~~iL~~~~~T~ygr~~----gf~--~I~t~edFr~~vPi~~Yed~~pyi~r~~~Ge~~~vl~~~pv~~f 95 (413)
++.++.|.+.|+++++..++++|+|++ |+. .|.+.+|++ ++|++++++++..... +. ..+-.++.+.+.
T Consensus 17 ~~~~~~q~~~L~~~l~~~~~~p~y~~~~~~~g~~~~~i~~~~dl~-~lP~~~~~~l~~~~p~---~~-~~~~~~~~~a~i 91 (436)
T 3qov_A 17 EKLQELQLQRLKKTINIAANSPYYKEVFSKNGITGDSIQSLDDIR-KIPFTTKSDMRANYPF---GL-VAGDMKRDGVRI 91 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCCTTSCSSSGGGG-GSCCBCHHHHHHTTTT---TT-CCSCHHHHEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCCHHHHHhcCCC---cc-ccCCCcCCeEEE
Confidence 466889999999999877999999875 664 688999998 6999999999754321 11 011110335578
Q ss_pred ecccccCCCCcccccCchHHHHHH
Q 015118 96 SRSSGTTQGKPKFLPFNDELMETT 119 (413)
Q Consensus 96 ~~TSGTT~G~~K~IP~T~~~~~~~ 119 (413)
..||||| |+||-+++|.+.+...
T Consensus 92 ~~TSGTT-G~PK~v~~th~~~~~~ 114 (436)
T 3qov_A 92 HSSSGTT-GNPTVIVHSQHDLDSW 114 (436)
T ss_dssp EECSCSS-SCCCEEEEEHHHHHHH
T ss_pred EECCCcC-CCCeEEEECHHHHHHH
Confidence 8999999 9999999999876543
No 7
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.41 E-value=2.4e-12 Score=127.89 Aligned_cols=85 Identities=13% Similarity=0.250 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHh-cc---cHHHHHhc----CCC---CCCCcccccccccceecCCchh-hHhhhccCCCCCcccCCCcce
Q 015118 27 IQRETLRKILEE-NA---SAEYLQNL----GLN---GRTDPESFKSCVPLVTHEDLQP-YIQRIIDGDISPILTGKPITT 94 (413)
Q Consensus 27 ~Q~~~L~~iL~~-~~---~T~ygr~~----gf~---~I~t~edFr~~vPi~~Yed~~p-yi~r~~~Ge~~~vl~~~pv~~ 94 (413)
.+++.|+++++. .+ +++|+|++ |+. .|++.+|++ ++|+++ ++++. +.+.+..- . +.++.+.+
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~p~Yr~~~~~~g~~p~~~i~~~~dl~-~lP~~~-~~l~~~~~~~~~p~---~-~~~~~~a~ 95 (369)
T 3hgu_A 22 DTNNFVQALMRWHFSKETGSPFWLGMREQLNFDPIKDVKTINDLR-QFSDIS-HCLRQEPVANLVPQ---G-LPADSHPQ 95 (369)
T ss_dssp CHHHHHHHHHHHHHSTTTSCHHHHHHGGGSSSCHHHHCCSTGGGG-GSCCCG-GGGTTSCGGGGSCT---T-SCTTCCCE
T ss_pred CHHHHHHHHHHHHcCCCCCCHHHHHHHHhcCCChhHhCCCHHHHh-hCCCch-hhhhcCCHHHcCCc---c-CCccccEE
Confidence 466778888876 56 89999985 563 688999998 599999 98876 44433310 1 13455668
Q ss_pred eecccccCCCCcccccCchHHHHH
Q 015118 95 ISRSSGTTQGKPKFLPFNDELMET 118 (413)
Q Consensus 95 f~~TSGTT~G~~K~IP~T~~~~~~ 118 (413)
...||||| |+||-+.+|++.+..
T Consensus 96 i~~TSGTT-G~PKgv~~t~~~~~~ 118 (369)
T 3hgu_A 96 VYESGGTT-GAPKYVVAYDAWIEA 118 (369)
T ss_dssp EEEECC----CCEEEEECHHHHHH
T ss_pred EEECCCCC-CCCCEEEECHHHHHH
Confidence 89999999 999999999987643
No 8
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=98.31 E-value=1.3e-06 Score=90.14 Aligned_cols=97 Identities=13% Similarity=0.078 Sum_probs=58.9
Q ss_pred CCcceeeeeccchhhHHHHHhhhhcCCCCceecccCCCcccc-ccccCCCCCCcceeeeeecCCceeeeeeccccCCCCc
Q 015118 293 PNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ 371 (413)
Q Consensus 293 P~L~~i~~~~~g~~~~y~~~l~~~~~~vpi~~~~Y~aSEg~i-~i~~~~~~~~~~~~~~l~p~~~ffEFip~~~~e~~~~ 371 (413)
+.|+ .+.+|+...-++++++.+++++++ ..||.||+.. +........+...+. ..|+ .-++.++.+ +
T Consensus 272 ~~lr---~~~~~g~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~G~-p~~~-~~~~i~d~~----~-- 339 (509)
T 3ivr_A 272 ASLR---AVTGLDTPETIERFEATCPNATFW-ATFGQSETSGLSTFAPYRDRPKSAGR-PLFW-RTVAVVDAE----D-- 339 (509)
T ss_dssp TTCC---EEEEECCHHHHHHHHHHCTTCEEE-EEEEEGGGTEEEEEEEGGGSTTSCCE-ECTT-CEEEEECTT----S--
T ss_pred hhhh---eecccCChHHHHHHHHhcCCCeEE-cccCccccccccccCccccCCCcccc-cCCC-cEEEEECCC----C--
Confidence 4566 455566556777888889898988 9999999842 221111111111222 2222 233444322 1
Q ss_pred ccccCCccccceeeeecceEEEEEee---ccceee-------------eeeccceec
Q 015118 372 VLCIEPKPVGLTEVKVGEEYEIIVTN---VAGMKM-------------SYTNNFLIA 412 (413)
Q Consensus 372 ~~~~~~~~l~~~ele~G~~YelVvTt---~~GLyR-------------Y~~gDvv~~ 412 (413)
+ +|..|+.+||+|+. ..|.|+ |+|||+++.
T Consensus 340 ------~-----~~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f~~g~~~TGDl~~~ 385 (509)
T 3ivr_A 340 ------R-----PLPPGEVGEIVLRGPTVFKGYWNNAAATQHAFRNGWHHTGDMGRF 385 (509)
T ss_dssp ------C-----BCCTTCCEEEEEESTTSCCEETTCHHHHHHHTGGGSEEEEEEEEE
T ss_pred ------C-----CCCCCCceEEEEecCCccccccCCHHHhHHHhhcCCcccccEEEE
Confidence 1 25789999999986 345555 999999875
No 9
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=98.24 E-value=8.1e-06 Score=84.20 Aligned_cols=40 Identities=23% Similarity=0.277 Sum_probs=28.8
Q ss_pred ccCCCcceeeeeccch---hhHHHHHhhhhcCCCCceecccCCCccc
Q 015118 290 ELFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGW 333 (413)
Q Consensus 290 ~lWP~L~~i~~~~~g~---~~~y~~~l~~~~~~vpi~~~~Y~aSEg~ 333 (413)
...++++ .+.+|+ ...-.+++++.+++++++ .+||.||+.
T Consensus 257 ~~~~~l~---~~~~~G~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~ 299 (511)
T 3e7w_A 257 DLLPHAD---TFMFCGEVLPVSVAKALLERFPKAKIF-NTYGPTEAT 299 (511)
T ss_dssp TTCTTCC---EEEECSSCCCHHHHHHHHHHCTTCEEE-ECCCCGGGS
T ss_pred ccCCccc---EEEEecCCCCHHHHHHHHHHCCCcEEE-eCcccchhe
Confidence 3456777 444444 255667788888899998 999999984
No 10
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=98.21 E-value=3.6e-06 Score=88.62 Aligned_cols=97 Identities=19% Similarity=0.298 Sum_probs=56.6
Q ss_pred CCCcceeeeeccchh---hHHHHHhhhhcCCCCceecccCCCccccccccCC--CCCCcceeeeeecCCceeeeeecccc
Q 015118 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--SLPPELATFAVLPNIGYFEFIPQRLG 366 (413)
Q Consensus 292 WP~L~~i~~~~~g~~---~~y~~~l~~~~~~vpi~~~~Y~aSEg~i~i~~~~--~~~~~~~~~~l~p~~~ffEFip~~~~ 366 (413)
.++|+ .+.+|+. ..-++++++.+ +++++ .+||.||+.+.+...+ ...++..+. ..|+ .-++.++++
T Consensus 340 l~~lr---~i~~gGe~l~~~~~~~~~~~~-g~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~G~-p~~~-~~v~ivd~~-- 410 (580)
T 3etc_A 340 FSTLK---YAVVAGEPLNPEVFNRFLEFT-GIKLM-EGFGQTETVVTIATFPWMEPKPGSIGK-PTPG-YKIELMDRD-- 410 (580)
T ss_dssp CTTCC---EEEECSSCCCHHHHHHHHHHH-SCCCE-EEECCTTSSCCEECCTTSCCCTTCCBE-ECTT-CEEEEECTT--
T ss_pred Cccce---EEEEccCCCCHHHHHHHHHHh-CCeEe-cccccccccceeecCCCCCCCCCcccc-CCCC-CEEEEECCC--
Confidence 35777 5555553 44456666666 67888 9999999854332211 111222233 2233 223444322
Q ss_pred CCCCcccccCCccccceeeeecceEEEEEeec----cceee-----------------eeeccceec
Q 015118 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV----AGMKM-----------------SYTNNFLIA 412 (413)
Q Consensus 367 e~~~~~~~~~~~~l~~~ele~G~~YelVvTt~----~GLyR-----------------Y~~gDvv~~ 412 (413)
.+ ++.+|+..||+|+.. .|+.+ |+|||++..
T Consensus 411 ----------g~-----~~~~g~~GEl~v~~~~g~~~~~~~gY~~~p~~t~~~f~~gwy~TGDlg~~ 462 (580)
T 3etc_A 411 ----------GR-----LCEVGEEGEIVINTMEGKPVGLFVHYGKDPERTEETWHDGYYHTGDMAWM 462 (580)
T ss_dssp ----------SC-----BCCTTCCEEEEEECTTCCCTTCCCEETTCHHHHHHHEETTEEEEEEEEEE
T ss_pred ----------CC-----CCCCCCceEEEEecCCCCCCeeeccccCCHhHHHhhcCCCEEecCcEEEE
Confidence 12 257899999999864 23443 999999875
No 11
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=98.20 E-value=6.4e-06 Score=85.95 Aligned_cols=99 Identities=15% Similarity=0.054 Sum_probs=57.9
Q ss_pred CCCcceeeeeccchh---hHHHHHhhhhcCCCCceecccCCCccccc--cccCCCCCCcceeeeeecCCceeeeeecccc
Q 015118 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIG--ANVNPSLPPELATFAVLPNIGYFEFIPQRLG 366 (413)
Q Consensus 292 WP~L~~i~~~~~g~~---~~y~~~l~~~~~~vpi~~~~Y~aSEg~i~--i~~~~~~~~~~~~~~l~p~~~ffEFip~~~~ 366 (413)
+++|+ .+.+|+. ...++++++.+|+++++ .+||.||+... .+.......+..+. ..|+ .-.+.++.+
T Consensus 308 l~~lr---~i~~gG~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~-- 379 (548)
T 2d1s_A 308 LSNLV---EIASGGAPLSKEVGEAVARRFNLPGVR-QGYGLTETTSAIIITPEGDDKPGASGK-VVPL-FKAKVIDLD-- 379 (548)
T ss_dssp CTTCC---EEEECSSCCCHHHHHHHHHHTTCSCCE-EEEECGGGSSEEEECCTTCCCTTCCBE-ECTT-CEEEEECTT--
T ss_pred cccee---EEEEcCccCCHHHHHHHHHHcCCCcee-eccccccccceeeecCcccCCCCCCCc-cCCC-ceEEEEeCC--
Confidence 45777 4444553 55667788888888888 99999998422 22111111122222 2233 334445433
Q ss_pred CCCCcccccCCccccceeeeecceEEEEEeecc---cee--------------eeeeccceec
Q 015118 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA---GMK--------------MSYTNNFLIA 412 (413)
Q Consensus 367 e~~~~~~~~~~~~l~~~ele~G~~YelVvTt~~---GLy--------------RY~~gDvv~~ 412 (413)
+ .+. |..|+..||+|+..+ |.| .|+|||++..
T Consensus 380 ~---------~~~-----~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~ 428 (548)
T 2d1s_A 380 T---------KKS-----LGPNRRGEVCVKGPMLMKGYVNNPEATKELIDEEGWLHTGDIGYY 428 (548)
T ss_dssp T---------CCB-----CCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEE
T ss_pred c---------Ccc-----CCCCCCeEEEECCHHHhhhhcCChHHhhhcccCCcEEEccCEEEE
Confidence 1 112 578999999998632 222 4999999875
No 12
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=98.14 E-value=3.2e-06 Score=87.33 Aligned_cols=30 Identities=30% Similarity=0.368 Sum_probs=21.6
Q ss_pred cCCCcceeecccccCCCCcccccCchHHHHH
Q 015118 88 TGKPITTISRSSGTTQGKPKFLPFNDELMET 118 (413)
Q Consensus 88 ~~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~ 118 (413)
.++.+.+...||||| |+||-+.+|.+.+..
T Consensus 143 ~~~d~a~i~~TSGTT-G~PKgV~~sh~~l~~ 172 (521)
T 3l8c_A 143 KGDDNYYIIFTSGTT-GQPKGVQISHDNLLS 172 (521)
T ss_dssp CTTSEEEEEECCC----CCCEEEEEHHHHHH
T ss_pred CCCCcEEEEEcCCCC-CCCCEEEEehHHHHH
Confidence 344556889999999 999999999987643
No 13
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=98.13 E-value=1.2e-05 Score=82.75 Aligned_cols=40 Identities=23% Similarity=0.360 Sum_probs=28.8
Q ss_pred cCCCcceeeeeccchh---hHHHHHhhhhcCCCCceecccCCCcccc
Q 015118 291 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI 334 (413)
Q Consensus 291 lWP~L~~i~~~~~g~~---~~y~~~l~~~~~~vpi~~~~Y~aSEg~i 334 (413)
..|+|+ .+.+|+. ..-.+++++.+++++++ ..||+||+..
T Consensus 259 ~~~~lr---~~~~~G~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~ 301 (512)
T 3fce_A 259 MLPNMK---TFLFCGEVLPNEVARKLIERFPKATIM-NTYGPTEATV 301 (512)
T ss_dssp TSTTCC---EEEECSSCCCHHHHHHHHHHCTTCEEE-EEECCGGGSS
T ss_pred hCcccc---EEEEecCcCCHHHHHHHHHHCCCCEEE-eCcccChhhh
Confidence 456787 4444442 55567777888899998 9999999843
No 14
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=98.10 E-value=1.5e-05 Score=82.14 Aligned_cols=30 Identities=23% Similarity=0.352 Sum_probs=22.5
Q ss_pred CCCcceeecccccCCCCcccccCchHHHHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELMETT 119 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~~ 119 (413)
++.+.+...||||| |+||-+.+|.+.+...
T Consensus 154 ~~d~a~i~~TSGTT-G~PKgV~~sh~~l~~~ 183 (503)
T 4fuq_A 154 ADDLAAILYTSGTT-GRSKGAMLSHDNLASN 183 (503)
T ss_dssp TTSEEEEEECC--C-CSCCEEEEEHHHHHHH
T ss_pred CCCeEEEEECCCcc-cCCeEEEEeHHHHHHH
Confidence 34456889999999 9999999999876543
No 15
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=98.06 E-value=1.3e-05 Score=82.44 Aligned_cols=29 Identities=31% Similarity=0.256 Sum_probs=21.0
Q ss_pred CCCcceeecccccCCCCcccccCchHHHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELMET 118 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~ 118 (413)
++.+.+...||||| |+||-+.+|.+.+..
T Consensus 152 ~~~~a~i~~TSGTT-G~PKgV~~sh~~~~~ 180 (504)
T 1t5h_X 152 PAQPAFIFYTSGTT-GLPKAAIIPQRAAES 180 (504)
T ss_dssp TTSEEEEEECCC----CCCEEEEEGGGHHH
T ss_pred CCCeEEEEeCCCCC-CCCCEEEecHHHHHH
Confidence 34456889999999 999999999987644
No 16
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=98.00 E-value=2.4e-05 Score=81.51 Aligned_cols=99 Identities=15% Similarity=0.109 Sum_probs=56.5
Q ss_pred CCCcceeeeeccchh---hHHHHHhhhhcCCCCceecccCCCccccccccCC--CCCCcceeeeeecCCceeeeeecccc
Q 015118 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--SLPPELATFAVLPNIGYFEFIPQRLG 366 (413)
Q Consensus 292 WP~L~~i~~~~~g~~---~~y~~~l~~~~~~vpi~~~~Y~aSEg~i~i~~~~--~~~~~~~~~~l~p~~~ffEFip~~~~ 366 (413)
.++|+ .+.+|+. ...++++++.++...++ .+||.||+...+-..+ ...++..+. ..|+ .-.+.++.+
T Consensus 306 l~~lr---~i~~gG~~l~~~~~~~~~~~~~~~~v~-~~YG~TE~~~~~~~~~~~~~~~~~vG~-~~~~-~~~~i~d~~-- 377 (550)
T 3rix_A 306 LSNLH---EIASGGAPLSKEVGEAVAKRFHLPGIR-QGYGLTETTSAILITPEGDDKPGAVGK-VVPF-FEAKVVDLD-- 377 (550)
T ss_dssp CTTCC---EEEECSSCCCHHHHHHHHHHTTCSCCE-EEEECGGGSSEEEECCTTCCCTTEEEE-ECTT-CEEEEECTT--
T ss_pred ccccc---EEEEecCCCCHHHHHHHHHHcCCCccc-cccCcCccccceecCCCCCCCCCCccc-ccCC-cEEEEEeCC--
Confidence 46777 5555553 55567777778654466 8999999853322222 112222222 2233 334455433
Q ss_pred CCCCcccccCCccccceeeeecceEEEEEeec---ccee--------------eeeeccceec
Q 015118 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGMK--------------MSYTNNFLIA 412 (413)
Q Consensus 367 e~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RY~~gDvv~~ 412 (413)
+ .+. |..|+..||+|+.. .|.| .|+|||++..
T Consensus 378 ~---------~~~-----~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~g~~~TGDl~~~ 426 (550)
T 3rix_A 378 T---------GKT-----LGVNQRGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYW 426 (550)
T ss_dssp T---------CCB-----CCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEE
T ss_pred C---------CcC-----CCCCCCeEEEEeCCCcchhhcCChhhhhhhcCCCCCeecCcEEEE
Confidence 1 122 57899999999853 2222 2899999875
No 17
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=97.99 E-value=2.1e-05 Score=81.73 Aligned_cols=99 Identities=15% Similarity=0.167 Sum_probs=57.6
Q ss_pred CCCcceeeeeccchh---hHHHHHhhhhcCCCCceecccCCCcccc--cccc----CC-CCCCcceeeeeecCCceeeee
Q 015118 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI--GANV----NP-SLPPELATFAVLPNIGYFEFI 361 (413)
Q Consensus 292 WP~L~~i~~~~~g~~---~~y~~~l~~~~~~vpi~~~~Y~aSEg~i--~i~~----~~-~~~~~~~~~~l~p~~~ffEFi 361 (413)
.++|+ .+.+|+. ..-.+++++.+|+++++ ..||.||+.. +... .+ ...++..+. ..|+ .-++.+
T Consensus 296 l~~lr---~i~~gGe~l~~~~~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~ 369 (536)
T 3ni2_A 296 LSSLR---MIKSGGAPLGKELEDTVRAKFPQARLG-QGYGMTEAGPVLAMCLAFAKEPFDIKPGACGT-VVRN-AEMKIV 369 (536)
T ss_dssp CTTCC---EEEEESSCCCHHHHHHHHHHCTTSEEE-EEEECGGGSSEEEECGGGSSSCCCCCTTCCCE-ECSS-CEEEEE
T ss_pred Cccce---EEEECCCCCCHHHHHHHHHHCCCCCcc-ccccccccchhhhcccccCCccccCCCCCeeE-eCCC-cEEEEE
Confidence 46777 5555553 55567777888898988 9999999842 2221 11 111121222 2222 334455
Q ss_pred eccccCCCCcccccCCccccceeeeecceEEEEEeec---ccee--------------eeeeccceec
Q 015118 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGMK--------------MSYTNNFLIA 412 (413)
Q Consensus 362 p~~~~e~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RY~~gDvv~~ 412 (413)
+.+ +.+. |..|+..||+|+.. .|.| .|+|||++..
T Consensus 370 d~~-----------~~~~-----~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~~g~~~TGDl~~~ 421 (536)
T 3ni2_A 370 DPE-----------TGAS-----LPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHTGDIGYI 421 (536)
T ss_dssp CTT-----------TCCB-----CCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEE
T ss_pred eCC-----------CCcC-----CCCCCccEEEEeCcccchhhcCChhHHHhhccCCCceEcccEEEE
Confidence 433 1122 57899999999842 2222 2899999875
No 18
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=97.99 E-value=2.1e-05 Score=81.89 Aligned_cols=29 Identities=24% Similarity=0.336 Sum_probs=23.1
Q ss_pred CCcceeecccccCCCCcccccCchHHHHHH
Q 015118 90 KPITTISRSSGTTQGKPKFLPFNDELMETT 119 (413)
Q Consensus 90 ~pv~~f~~TSGTT~G~~K~IP~T~~~~~~~ 119 (413)
+.+.+...||||| |+||-+.+|.+.+...
T Consensus 180 ~d~a~i~~TSGTT-G~PKgV~~sh~~l~~~ 208 (549)
T 3g7s_A 180 EDVALIPYTGGTT-GMPKGVMLTHFNLAAN 208 (549)
T ss_dssp TSEEECCEECCCC-C-CEEEEEEHHHHHHH
T ss_pred CCEEEEEECCCcc-CCCceEEEcHHHHHHH
Confidence 4556888999999 9999999999876543
No 19
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=97.92 E-value=2.3e-05 Score=81.44 Aligned_cols=30 Identities=20% Similarity=0.323 Sum_probs=24.3
Q ss_pred CCCcceeecccccCCCCcccccCchHHHHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELMETT 119 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~~ 119 (413)
++.+.+...||||| |+||-+.+|.+.+-..
T Consensus 181 ~~d~a~i~~TSGTT-G~PKgV~~th~~~~~~ 210 (539)
T 1mdb_A 181 SSDVAFLQLSGGST-GLSKLIPRTHDDYIYS 210 (539)
T ss_dssp TTSEEEEEECCCSS-SSCCEEEEEHHHHHHH
T ss_pred cCceEEEEeCCCcC-CCCcEEEEehHHHHHH
Confidence 34456889999999 9999999999876443
No 20
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=97.88 E-value=4e-05 Score=79.09 Aligned_cols=32 Identities=31% Similarity=0.323 Sum_probs=25.3
Q ss_pred CCCcceeecccccCCCCcccccCchHHHHHHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELMETTLQ 121 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~~~~ 121 (413)
++.+.+...||||| |+||-+.+|.+.+.....
T Consensus 154 ~~d~a~i~~TSGTT-G~PKgV~~sh~~l~~~~~ 185 (505)
T 3nyq_A 154 DGDPALVVYTSGTT-GPPKGAVIPRRALATTLD 185 (505)
T ss_dssp TTSEEEEEEECCSS-SSCEEEEEEHHHHHHHHH
T ss_pred CCCeEEEEeCCCCc-CCCCeEEEeHHHHHHHHH
Confidence 34456889999999 999999999998755433
No 21
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=97.80 E-value=3.5e-05 Score=80.22 Aligned_cols=32 Identities=22% Similarity=0.460 Sum_probs=23.4
Q ss_pred CCCcceeecccccCCCCcccccCchHHHHHHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELMETTLQ 121 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~~~~ 121 (413)
++.+.+...||||| |+||-+..|.+.+.....
T Consensus 190 ~~d~a~i~~TSGTT-G~PKgv~~sh~~~~~~~~ 221 (544)
T 3o83_A 190 ADEVAFFQLSGGST-GTPKLIPRTHNDYDYSVR 221 (544)
T ss_dssp TTSEEEEEECCC---CCCCEEEEEHHHHHHHHH
T ss_pred ccceEEEEECCCcc-cCCceEEechHHHHHHHH
Confidence 44556888999999 999999999987654433
No 22
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=97.79 E-value=0.00011 Score=76.37 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=22.0
Q ss_pred CCcceeecccccCCCCcccccCchHHHHHHHHH
Q 015118 90 KPITTISRSSGTTQGKPKFLPFNDELMETTLQI 122 (413)
Q Consensus 90 ~pv~~f~~TSGTT~G~~K~IP~T~~~~~~~~~~ 122 (413)
+.+.+...||||| |+||-+.+|.+.+......
T Consensus 175 ~~~a~i~~TSGTT-G~PKgV~~th~~l~~~~~~ 206 (562)
T 3ite_A 175 NLDAYLLYTSGST-GTPKGVRVSRHNLSSFSDA 206 (562)
T ss_dssp TSEEEEEEECC----CCEEEEEEHHHHHHHHHH
T ss_pred CCcEEEEECCCCC-CCCcEEEECchhHHHHHHH
Confidence 3345788999999 9999999999877554333
No 23
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=97.78 E-value=6.1e-05 Score=78.70 Aligned_cols=30 Identities=20% Similarity=0.222 Sum_probs=24.6
Q ss_pred CCCcceeecccccCCCCcccccCchHHHHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELMETT 119 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~~ 119 (413)
++.+.+...||||| |+||-+.+|.+.+-..
T Consensus 166 ~~d~a~i~~TSGTT-G~PKgV~~th~~l~~~ 195 (590)
T 3kxw_A 166 SNDIAFLQYTSGST-MHPKGVMVSHHNLLDN 195 (590)
T ss_dssp TTSEEEEEECSSCS-SSCCEEEEEHHHHHHH
T ss_pred CCCeEEEEeCcCCC-CCceEEEeeHHHHHHH
Confidence 44456889999999 9999999999876544
No 24
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=97.75 E-value=5.9e-05 Score=77.97 Aligned_cols=95 Identities=9% Similarity=-0.014 Sum_probs=55.1
Q ss_pred Ccceeeeeccchh---hHHHHHhhhhcCCCCceecccCCCcc-cccccc-CCCCCCcceeeeeecCCceeeeeeccccCC
Q 015118 294 NAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEG-WIGANV-NPSLPPELATFAVLPNIGYFEFIPQRLGNL 368 (413)
Q Consensus 294 ~L~~i~~~~~g~~---~~y~~~l~~~~~~vpi~~~~Y~aSEg-~i~i~~-~~~~~~~~~~~~l~p~~~ffEFip~~~~e~ 368 (413)
+++ .+.+|+. ...++++++.+ +++++ .+||+||+ .+.+.. ......+..+. ..|+ .-++.++.+
T Consensus 301 ~lr---~~~~gGe~l~~~~~~~~~~~~-g~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~G~-p~~~-~~~~i~d~~---- 369 (529)
T 2v7b_A 301 AIR---ICTSAGEALPREIGERFTAHF-GCEIL-DGIGSTEMLHIFLSNRAGAVEYGTTGR-PVPG-YEIELRDEA---- 369 (529)
T ss_dssp CCC---EEEECSSCCCHHHHHHHHHHH-SCCEE-EEEECTTTSSEEEECCTTCCCTTSCCE-ECTT-CEEEEECTT----
T ss_pred ceE---EEEEcCCCCCHHHHHHHHHHh-CCcee-eeEchhhcCceeeccccCCCccCCccc-CCCC-CEEEEECCC----
Confidence 566 4444442 55566777767 67888 99999997 333221 11111222222 2233 334555422
Q ss_pred CCcccccCCccccceeeeecceEEEEEeec---cceee-------------eeeccceec
Q 015118 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGMKM-------------SYTNNFLIA 412 (413)
Q Consensus 369 ~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLyR-------------Y~~gDvv~~ 412 (413)
+ +. |..|+..||+|+.. .|.|+ |+|||++..
T Consensus 370 g--------~~-----~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f~~~~~~TGDl~~~ 416 (529)
T 2v7b_A 370 G--------HA-----VPDGEVGDLYIKGPSAAVMYWNNREKSRATFLGEWIRSGDKYCR 416 (529)
T ss_dssp S--------CB-----CCTTSCEEEEEECTTCCCCBTTCHHHHHHHEETTEEEEEEEEEE
T ss_pred C--------CC-----CCCCCccEEEEecCCcccccCCChHHHHHhhhcCCcccCceEEE
Confidence 1 12 57899999999873 35543 899999864
No 25
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=97.72 E-value=9.1e-05 Score=76.54 Aligned_cols=30 Identities=33% Similarity=0.395 Sum_probs=21.7
Q ss_pred CCCcceeecccccCCCCcccccCchHHHHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELMETT 119 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~~ 119 (413)
++.+.+...||||| |+||-+.+|.+.+...
T Consensus 169 ~~d~a~i~~TSGTT-G~PKgV~~sh~~l~~~ 198 (517)
T 3r44_A 169 GDDNLFIMYTSGTT-GHPKGVVHTHESVHSA 198 (517)
T ss_dssp TTSEEEEEEECC----CCEEEEEEHHHHHHH
T ss_pred CCCeEEEEECCccc-ccCceeeeeHHHHHHH
Confidence 44556889999999 9999999999876443
No 26
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=97.71 E-value=9.8e-05 Score=77.42 Aligned_cols=27 Identities=26% Similarity=0.372 Sum_probs=22.2
Q ss_pred CCCcceeecccccCCCCcccccCchHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELM 116 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~ 116 (413)
++.+.+...||||| |+||-+..|.+.+
T Consensus 205 ~~d~a~i~~TSGTT-G~PKgV~~sh~~~ 231 (570)
T 3c5e_A 205 SQEASAIYFTSGTS-GLPKMAEHSYSSL 231 (570)
T ss_dssp TTSEEEEEECCCSS-SSCCEEEEEHHHH
T ss_pred CCCcEEEEECCCCC-CCCCEEEechHHH
Confidence 34456788999999 9999999999843
No 27
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=97.70 E-value=0.00013 Score=81.40 Aligned_cols=99 Identities=12% Similarity=0.147 Sum_probs=56.7
Q ss_pred CCCcceeeeeccchh---hHHHHHhhhhcCCCCceecccCCCcccc--cccc----CCC-CCCcceeeeeecCCceeeee
Q 015118 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI--GANV----NPS-LPPELATFAVLPNIGYFEFI 361 (413)
Q Consensus 292 WP~L~~i~~~~~g~~---~~y~~~l~~~~~~vpi~~~~Y~aSEg~i--~i~~----~~~-~~~~~~~~~l~p~~~ffEFi 361 (413)
.++|+ .+.+|+. ..-.+++++.+|+++++ ..||.||+.. +... .+. ...+..+. ..|+ .-++.+
T Consensus 343 l~~lr---~~~~gg~~l~~~~~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~-p~~~-~~~~i~ 416 (979)
T 3tsy_A 343 LSSIR---VVKSGAAPLGKELEDAVNAKFPNAKLG-QGYGMTEAGPVLAMSLGFAKEPFPVKSGACGT-VVRN-AEMKIV 416 (979)
T ss_dssp CTTCC---EEEESSCCCCSSHHHHHHHHCTTCEEE-ECEECGGGCSEEEECGGGSSSCCCCCTTCCCE-ECSS-CEEEEE
T ss_pred ccceE---EEEEcCCCCCHHHHHHHHHHCCCCeEE-eeechhhhhHHHHhCCCCCCCccccCCCCcCc-ccCC-cEEEEE
Confidence 35677 5555553 45556777788899998 9999999842 2221 111 01111222 2223 233444
Q ss_pred eccccCCCCcccccCCccccceeeeecceEEEEEeec---ccee--------------eeeeccceec
Q 015118 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGMK--------------MSYTNNFLIA 412 (413)
Q Consensus 362 p~~~~e~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RY~~gDvv~~ 412 (413)
+.+ . .+. |..|+..||+|+.. .|.| -|+|||+++.
T Consensus 417 d~~--~---------~~~-----~~~g~~GEl~i~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDl~~~ 468 (979)
T 3tsy_A 417 DPD--T---------GDS-----LSRNQPGEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLI 468 (979)
T ss_dssp CTT--S---------CCB-----CCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEE
T ss_pred eCC--C---------CCC-----CCCCCccEEEEECCCccccccCChhhhhhhccCCCcEEcCCEEEE
Confidence 433 1 122 57799999999842 2332 2899999875
No 28
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=97.68 E-value=0.00011 Score=77.80 Aligned_cols=30 Identities=27% Similarity=0.409 Sum_probs=24.5
Q ss_pred CCCcceeecccccCCCCcccccCchHHHHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELMETT 119 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~~ 119 (413)
++.+.+...||||| |+||-+.+|.+.+...
T Consensus 183 ~~~~a~ii~TSGST-G~PKgV~~th~~~~~~ 212 (617)
T 3rg2_A 183 ADEVAYFQLSGGTT-GTPKLIPRTHNDYYYS 212 (617)
T ss_dssp TTSEEEEEECCCSS-SSCCEEEEEHHHHHHH
T ss_pred CCCeEEEEECCCcC-CCCCEeehhHHHHHHH
Confidence 44556889999999 9999999999876443
No 29
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=97.65 E-value=0.00014 Score=75.41 Aligned_cols=29 Identities=17% Similarity=0.190 Sum_probs=23.9
Q ss_pred CCCcceeecccccCCCCcccccCchHHHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELMET 118 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~ 118 (413)
++.+.+...||||| |+||-+.+|.+.+-.
T Consensus 175 ~~d~a~i~~TSGTT-G~PKgV~~sh~~~~~ 203 (576)
T 3gqw_A 175 PNDIAYLQYTSGST-RFPRGVIITHREVMA 203 (576)
T ss_dssp TTSEEEEECTTSCS-SSCCCEEEEHHHHHH
T ss_pred CCCeEEEEeCCCCC-CCCceEEeeHHHHHH
Confidence 34456889999999 999999999987643
No 30
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=97.60 E-value=0.00023 Score=76.12 Aligned_cols=27 Identities=22% Similarity=0.219 Sum_probs=22.3
Q ss_pred CCCcceeecccccCCCCcccccCchHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELM 116 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~ 116 (413)
++-+.+...||||| |+||-+..|...+
T Consensus 261 ~~d~a~ilyTSGTT-G~PKgV~~sh~~~ 287 (663)
T 1ry2_A 261 SEDPLFLLYTSGST-GAPKGVQHSTAGY 287 (663)
T ss_dssp TTSCCEEEEECCSS-SSCEEEEECSHHH
T ss_pred CCCceEEEeccCCC-CCCceEEEchhHH
Confidence 33445889999999 9999999998864
No 31
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=97.60 E-value=0.00019 Score=75.11 Aligned_cols=29 Identities=24% Similarity=0.331 Sum_probs=18.8
Q ss_pred CCCcceeecccccCCCCcccccCchHHHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELMET 118 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~ 118 (413)
++.+.+...||||| |+||-+..|.+.+..
T Consensus 181 ~~d~a~i~~TSGTT-G~PKgV~~th~~l~~ 209 (563)
T 1amu_A 181 STDLAYVIYTSGTT-GNPKGTMLEHKGISN 209 (563)
T ss_dssp TTSEEEEEEEC------CEEEEEESHHHHH
T ss_pred CCCeEEEEECCCCC-CCCcEEEEehHHHHH
Confidence 34456888999999 999999999987643
No 32
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=97.60 E-value=8.6e-05 Score=77.68 Aligned_cols=27 Identities=22% Similarity=0.346 Sum_probs=22.8
Q ss_pred CCCcceeecccccCCCCcccccCchHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELM 116 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~ 116 (413)
++.+.+...||||| |+||-+.+|.+.+
T Consensus 213 ~~d~a~i~~TSGTT-G~PKgV~~th~~l 239 (570)
T 4gr5_A 213 PEDVACVMFTSGST-GRPKGVMSPHRAL 239 (570)
T ss_dssp TTSEEEEECCSSCC-SSCCCEEEEHHHH
T ss_pred CCCeEEEEECCcCC-CCCeEEEEecHHH
Confidence 44556889999999 9999999999875
No 33
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=97.57 E-value=0.0003 Score=74.92 Aligned_cols=27 Identities=30% Similarity=0.239 Sum_probs=22.6
Q ss_pred CCCcceeecccccCCCCcccccCchHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELM 116 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~ 116 (413)
++-+.+...||||| |+||-+..|...+
T Consensus 255 ~~d~a~ilyTSGTT-G~PKgV~~sh~~~ 281 (652)
T 1pg4_A 255 AEDPLFILYTSGST-GKPKGVLHTTGGY 281 (652)
T ss_dssp TTSEEEEEEECCSS-SSCEEEEEESHHH
T ss_pred CCCCEEEEeccCCC-CCCceEEECchHH
Confidence 44456889999999 9999999999865
No 34
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=97.44 E-value=0.00019 Score=70.91 Aligned_cols=26 Identities=23% Similarity=0.415 Sum_probs=21.7
Q ss_pred ceeecccccCCCCcccccCchHHHHHH
Q 015118 93 TTISRSSGTTQGKPKFLPFNDELMETT 119 (413)
Q Consensus 93 ~~f~~TSGTT~G~~K~IP~T~~~~~~~ 119 (413)
.+...||||| |+||-+..|.+.+...
T Consensus 40 a~Il~TSGTT-G~PKgV~~th~~l~~~ 65 (358)
T 4gs5_A 40 EFVLHTSGST-GMPKPITVTRAQLAAS 65 (358)
T ss_dssp EEEEEEECTT-SSEEEEEEEHHHHHHH
T ss_pred EEEEECCccc-ccCcEEEEeHHHHHHH
Confidence 4677899999 9999999999876443
No 35
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=97.44 E-value=0.00079 Score=68.13 Aligned_cols=30 Identities=13% Similarity=0.164 Sum_probs=18.5
Q ss_pred CCCcceeecccccCCCCcccccCchHHHHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELMETT 119 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~~ 119 (413)
++.+.+...||||| |+||-+.+|.+.+...
T Consensus 182 ~~d~a~i~~TSGTT-G~PKgV~~th~~l~~~ 211 (480)
T 3t5a_A 182 YPSTAYLQYTSGST-RTPAGVVMSHQNVRVN 211 (480)
T ss_dssp CCSEEEEECC-------CCCEEEEHHHHHHH
T ss_pred CCceEEEEecCCCC-CCCcEEEEeHHHHHHH
Confidence 34456889999999 9999999999876443
No 36
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=97.43 E-value=0.00033 Score=74.29 Aligned_cols=27 Identities=37% Similarity=0.498 Sum_probs=23.1
Q ss_pred CCCcceeecccccCCCCcccccCchHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELM 116 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~ 116 (413)
++.+.+...||||| |+||-+.+|.+.+
T Consensus 163 ~~d~a~iiyTSGST-G~PKgV~~th~~l 189 (620)
T 4dg8_A 163 ADQIAYINFSSGTT-GRPKAIACTHAGI 189 (620)
T ss_dssp TTSEEEEEEEBSSS-SSCEEEEEEHHHH
T ss_pred CCCeEEEEECCCcc-ccCeEEEEchHHH
Confidence 45566889999999 9999999999875
No 37
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=97.40 E-value=0.00034 Score=71.62 Aligned_cols=29 Identities=31% Similarity=0.228 Sum_probs=23.9
Q ss_pred CCCcceeecccccCCCCcccccCchHHHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELMET 118 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~~~ 118 (413)
++.+.+...||||| |+||-+.+|.+.+..
T Consensus 162 ~~d~a~i~~TSGTT-G~PKgv~~th~~~~~ 190 (501)
T 3ipl_A 162 LDDIASIMFTSGTT-GPQKAVPQTFRNHYA 190 (501)
T ss_dssp TTSEEEEEECCTTT-SCCCEEEEEHHHHHH
T ss_pred CCCeEEEEECCCCC-CCCcEEEEeHHHHHH
Confidence 44556889999999 999999999887644
No 38
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=97.09 E-value=0.0019 Score=66.92 Aligned_cols=27 Identities=22% Similarity=0.429 Sum_probs=22.5
Q ss_pred CCCcceeecccccCCCCcccccCchHHH
Q 015118 89 GKPITTISRSSGTTQGKPKFLPFNDELM 116 (413)
Q Consensus 89 ~~pv~~f~~TSGTT~G~~K~IP~T~~~~ 116 (413)
++.+.+...||||| |+||-+.+|.+.+
T Consensus 175 ~~~~a~i~~TSGTT-G~PKgV~~sh~~l 201 (541)
T 1v25_A 175 ERAACGMAYTTGTT-GLPKGVVYSHRAL 201 (541)
T ss_dssp TTSEEEEEEECSSS-SSCEEEEEEHHHH
T ss_pred CCCcEEEEECCCCC-CCCcEeeeehHHH
Confidence 34456788899999 9999999999875
No 39
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=96.61 E-value=0.0057 Score=70.30 Aligned_cols=28 Identities=32% Similarity=0.224 Sum_probs=23.7
Q ss_pred cCCCcceeecccccCCCCcccccCchHHH
Q 015118 88 TGKPITTISRSSGTTQGKPKFLPFNDELM 116 (413)
Q Consensus 88 ~~~pv~~f~~TSGTT~G~~K~IP~T~~~~ 116 (413)
.++-+.+...||||| |+||-+.+|.+.+
T Consensus 605 ~~~~~ayiiyTSGST-G~PKgV~~~h~~l 632 (1304)
T 2vsq_A 605 DPNDPAYIMYTSGTT-GKPKGNITTHANI 632 (1304)
T ss_dssp CTTSEEEEEEECCSS-SSCEEEEEEHHHH
T ss_pred CCCCeEEEEeCCCCC-CCCCEEEEehHHH
Confidence 345567889999999 9999999999875
No 40
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=30.64 E-value=21 Score=29.40 Aligned_cols=26 Identities=12% Similarity=0.276 Sum_probs=21.8
Q ss_pred eeeecceEEEEEeeccc--eeeeeeccc
Q 015118 384 EVKVGEEYEIIVTNVAG--MKMSYTNNF 409 (413)
Q Consensus 384 ele~G~~YelVvTt~~G--LyRY~~gDv 409 (413)
+.-.|+.|+++|.+..| +|||.-++.
T Consensus 37 ~f~Sgq~~Df~v~d~~G~~VwrwS~~~~ 64 (120)
T 3isy_A 37 QFSTGQKFELVVYDSEHKERYRYSKEKM 64 (120)
T ss_dssp EESSSCCEEEEEECTTCCEEEETTTTCC
T ss_pred EeCCCCEEEEEEECCCCCEEEEccccch
Confidence 35679999999999888 999987663
No 41
>2m0n_A Putative uncharacterized protein; tuberculosis, structural genomics, seattle structural genomi for infectious disease, ssgcid; NMR {Mycobacterium abscessus}
Probab=29.11 E-value=88 Score=25.36 Aligned_cols=53 Identities=9% Similarity=0.194 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHhhcCcc----ccccchhHHHHHHHhhc--CCChHhHHHHHHHhccCccc
Q 015118 231 FELVWEELCDDIREGVL----SSRITVPSIRAAMSKIL--KPNPELADLIHKKCSGLSNW 284 (413)
Q Consensus 231 le~~w~~l~~dI~~Gt~----~~~~~~~~~r~~l~~~l--~~~p~rA~~L~~~~~~~~g~ 284 (413)
.++.=.+++..|.+... ...++..+|+..|.++. -|.|+-.+++++.+... ||
T Consensus 42 tdeEV~~Va~~L~~~~~~~~~~~~i~~~dI~v~It~VT~e~P~peDI~RV~arLaA~-GW 100 (112)
T 2m0n_A 42 TEEQVQEVVAKLTDPESSAQIDGVVSKDEIEKFIADVTKDEPTAQDISRVASRLAAG-GW 100 (112)
T ss_dssp CHHHHHHHHHHHTCTTTHHHHTSCCCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHHC-CT
T ss_pred CHHHHHHHHHHHHhccCcccCCCCCCHHHHHHHHHHHhccCcCHHHHHHHHHHHHhc-CC
Confidence 46666777777765443 23577789999999988 47777777776665543 55
No 42
>3ol3_A Putative uncharacterized protein; tuberculosis, RV0543C, ortholog, iodide ION S phasing, structural genomics; HET: PG4 PGE; 1.95A {Mycobacterium smegmatis} PDB: 3ol4_A
Probab=27.00 E-value=79 Score=25.45 Aligned_cols=53 Identities=21% Similarity=0.288 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhhcCcc-ccccchhHHHHHHHhhc--CCChHhHHHHHHHhccCccc
Q 015118 231 FELVWEELCDDIREGVL-SSRITVPSIRAAMSKIL--KPNPELADLIHKKCSGLSNW 284 (413)
Q Consensus 231 le~~w~~l~~dI~~Gt~-~~~~~~~~~r~~l~~~l--~~~p~rA~~L~~~~~~~~g~ 284 (413)
.+++-.+++..|.+... ...++..+|+..|.++. -|.|+-.+++++.+... ||
T Consensus 45 tddev~~Va~~L~~~~~~~~pi~~~dI~~~It~vT~~~P~~eDi~RV~arLaa~-GW 100 (107)
T 3ol3_A 45 TEDEVVRAAQAILRSTDGQSPVTDDDIRNAVHQIIEKEPTAEEINQVAARLASV-GW 100 (107)
T ss_dssp CHHHHHHHHHHHHHHCCSSSCBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHHTT-TC
T ss_pred CHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhc-CC
Confidence 45566666666654333 23477788999999888 47777777777766654 65
Done!