Query 015120
Match_columns 413
No_of_seqs 113 out of 1302
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 07:03:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015120.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015120hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1we3_A CPN60(groel); chaperoni 100.0 5.4E-89 1.8E-93 714.4 41.0 409 1-411 133-543 (543)
2 3rtk_A 60 kDa chaperonin 2; he 100.0 1.2E-89 4.2E-94 717.3 33.5 405 1-410 133-539 (546)
3 1kp8_A Groel protein; chaperon 100.0 5.7E-89 2E-93 713.6 35.6 394 1-397 133-527 (547)
4 1iok_A Chaperonin 60; chaperon 100.0 6.3E-89 2.1E-93 713.6 27.0 396 1-398 134-530 (545)
5 3p9d_C T-complex protein 1 sub 100.0 2.1E-72 7.1E-77 592.7 25.3 365 1-395 139-588 (590)
6 3aq1_B Thermosome subunit; gro 100.0 3.1E-70 1.1E-74 568.8 32.9 351 1-411 92-496 (500)
7 3ruv_A Chaperonin, CPN; double 100.0 3.4E-70 1.2E-74 573.3 32.3 339 1-399 138-525 (543)
8 3ko1_A Chaperonin; 9-fold symm 100.0 7.6E-70 2.6E-74 571.1 32.5 345 1-405 149-545 (553)
9 1q3q_A Thermosome alpha subuni 100.0 1.1E-69 3.9E-74 569.9 30.9 352 1-412 142-547 (548)
10 1a6d_B Thermosome (beta subuni 100.0 2.5E-69 8.4E-74 567.2 31.3 342 1-402 140-532 (543)
11 3iyg_B T-complex protein 1 sub 100.0 3.7E-68 1.3E-72 554.8 36.6 334 1-395 131-513 (513)
12 1a6d_A Thermosome (alpha subun 100.0 7.5E-69 2.6E-73 563.4 30.7 334 2-396 142-525 (545)
13 3iyg_H T-complex protein 1 sub 100.0 3.8E-68 1.3E-72 554.6 35.3 336 1-393 130-514 (515)
14 3iyg_A T-complex protein 1 sub 100.0 5.5E-68 1.9E-72 555.4 36.1 338 1-393 130-528 (529)
15 3p9d_A T-complex protein 1 sub 100.0 6.7E-69 2.3E-73 564.9 27.9 342 1-397 144-552 (559)
16 3p9d_G T-complex protein 1 sub 100.0 1.2E-68 4E-73 562.2 25.0 341 1-399 143-533 (550)
17 3iyg_D T-complex protein 1 sub 100.0 1.1E-66 3.8E-71 544.2 34.4 333 1-393 130-518 (518)
18 3p9d_D T-complex protein 1 sub 100.0 4.1E-68 1.4E-72 555.9 22.7 337 1-393 138-528 (528)
19 3iyg_E T-complex protein 1 sub 100.0 3.1E-66 1E-70 540.8 36.0 332 1-392 129-514 (515)
20 3p9d_B T-complex protein 1 sub 100.0 5.4E-68 1.8E-72 555.5 21.8 338 1-399 138-524 (527)
21 3iyg_G T-complex protein 1 sub 100.0 4.1E-66 1.4E-70 539.6 35.0 333 1-393 128-514 (515)
22 3iyg_Q T-complex protein 1 sub 100.0 5E-66 1.7E-70 538.8 34.7 331 2-393 135-512 (512)
23 3p9d_E T-complex protein 1 sub 100.0 9.2E-66 3.2E-70 541.4 30.6 341 1-395 164-560 (562)
24 3iyg_Z T-complex protein 1 sub 100.0 3.9E-65 1.3E-69 532.1 33.7 331 1-392 129-516 (517)
25 3p9d_H T-complex protein 1 sub 100.0 5.9E-67 2E-71 551.1 15.6 336 6-401 154-556 (568)
26 3p9d_F T-complex protein 1 sub 100.0 2.3E-65 7.8E-70 537.4 21.4 335 2-396 137-540 (546)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 7.6E-49 2.6E-53 350.5 16.5 193 53-245 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 1.8E-47 6.2E-52 342.3 17.6 190 55-244 11-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 2.1E-36 7.3E-41 258.5 14.9 144 58-201 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 3.2E-25 1.1E-29 200.4 13.4 146 49-253 1-174 (178)
31 1ass_A Thermosome; chaperonin, 99.9 2.7E-21 9.3E-26 171.4 12.9 127 56-205 1-154 (159)
32 1s3l_A Hypothetical protein MJ 29.3 97 0.0033 26.6 6.2 52 76-127 17-70 (190)
33 2lnd_A De novo designed protei 29.2 1.8E+02 0.0062 21.8 7.6 33 94-126 35-67 (112)
34 3aon_B V-type sodium ATPase su 26.6 90 0.0031 25.0 5.0 74 93-168 27-104 (115)
35 3v7e_A Ribosome-associated pro 26.1 1.2E+02 0.0042 22.4 5.4 51 103-164 20-71 (82)
36 1gtz_A 3-dehydroquinate dehydr 23.2 2.6E+02 0.009 23.7 7.4 86 80-168 3-104 (156)
37 1sgw_A Putative ABC transporte 21.4 76 0.0026 28.1 4.0 42 81-122 149-195 (214)
38 1pq4_A Periplasmic binding pro 21.0 3.1E+02 0.01 25.2 8.3 36 94-129 221-256 (291)
39 3s6g_A N-acetylglutamate kinas 20.4 2.3E+02 0.0078 28.3 7.6 69 214-288 31-104 (460)
40 2wh0_Q Pkcev3, protein kinase 20.2 73 0.0025 18.7 2.3 19 249-267 9-27 (31)
No 1
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=5.4e-89 Score=714.41 Aligned_cols=409 Identities=52% Similarity=0.819 Sum_probs=382.8
Q ss_pred CccccCCh-hHHHHHHHhcCCchhHHHHHHHHHHHhccCCceeeecCCccccceeeeeceEEecccccCccccCcccCee
Q 015120 1 MSKEVEDS-ELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAV 79 (413)
Q Consensus 1 ~a~pv~~~-~L~~VA~ts~~~~~~la~lv~~Ai~~vg~~~~I~~~~g~s~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~ 79 (413)
+|+|++++ +|.+||+||++ +++|++++++|+.+++.+|+|+++.|++++|++++++|++|+++|+||||++++++|++
T Consensus 133 ~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~ 211 (543)
T 1we3_A 133 LAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEA 211 (543)
T ss_dssp TCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBC
T ss_pred hcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCce
Confidence 57899888 99999999998 99999999999999999999999999999999889999999999999999999999999
Q ss_pred eecCeeEEEecccCCCHHHHHHHHHHHHhcCCCEEEEeccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHH
Q 015120 80 EYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIA 159 (413)
Q Consensus 80 ~~~~~~Ili~d~~i~~~~~~~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la 159 (413)
+++||+||++|++|+++++++++++++.+.|+||||++++|+++++++|+.|+++|.++|+|||+|+||+.++.+|+|||
T Consensus 212 ~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia 291 (543)
T 1we3_A 212 VLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIA 291 (543)
T ss_dssp CEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHH
T ss_pred eecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeecCcCccccCCCCcccccceEEEEcCCeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhc
Q 015120 160 ILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLS 239 (413)
Q Consensus 160 ~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~ 239 (413)
++|||+++++++|++++++++++||+|+.|++++++++||++|++++.+..|+++|+.+++.++++|+|++|+||+++|+
T Consensus 292 ~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~ 371 (543)
T 1we3_A 292 AVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLA 371 (543)
T ss_dssp HHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHT
T ss_pred HHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhcc
Confidence 99999999998999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhhhcCccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHH
Q 015120 240 GGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPL 319 (413)
Q Consensus 240 g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip 319 (413)
|++|||+|||+|+.+++|+||+++||||++|+++++|+|||||++|++++.+|++++.+.++.+| +++++|++||+.||
T Consensus 372 ~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip 450 (543)
T 1we3_A 372 GGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEA-TGAKIVRRALEEPA 450 (543)
T ss_dssp TCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHH-HHHHHHHHHTTHHH
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHH-HHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999877778777 69999999999999
Q ss_pred HHHHHhcCCCchhhHHhhhcc-CCCceeeecCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCCCCC
Q 015120 320 KLIAKNAGVNGSVVSEKVLSS-DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEP 398 (413)
Q Consensus 320 ~~L~~NaG~d~~~i~~kl~~~-~~~~~G~d~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~ 398 (413)
++||+|||+|+.+++.+|++. ++.++|||+.+|+++||++.|||||+.||+++|++|+|+|++|||||++|...|++.|
T Consensus 451 ~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~ 530 (543)
T 1we3_A 451 RQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKKE 530 (543)
T ss_dssp HHHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSCC--
T ss_pred HHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCC
Confidence 999999999999999999973 3678999999999999999999999999999999999999999999999999887766
Q ss_pred CCCCCCCCCCCCC
Q 015120 399 AMPAGNPMDNSGY 411 (413)
Q Consensus 399 ~~~~~~~~~~~~~ 411 (413)
+||+..++..|+|
T Consensus 531 ~~~~~~~~~~~~~ 543 (543)
T 1we3_A 531 STPASAGAGDMDF 543 (543)
T ss_dssp -------------
T ss_pred CCCCCCCCCCCCC
Confidence 6555444555554
No 2
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.2e-89 Score=717.31 Aligned_cols=405 Identities=53% Similarity=0.790 Sum_probs=369.2
Q ss_pred CccccCCh-hHHHHHHHhcCCchhHHHHHHHHHHHhccCCceeeecCCccccceeeeeceEEecccccCccccCcccCee
Q 015120 1 MSKEVEDS-ELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAV 79 (413)
Q Consensus 1 ~a~pv~~~-~L~~VA~ts~~~~~~la~lv~~Ai~~vg~~~~I~~~~g~s~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~ 79 (413)
+|+|++++ +|.+||+||++ ++++++++++|+.+++.+|+|+++.+++..+.+++++|++|+++|.||||++++++|++
T Consensus 133 ~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~ 211 (546)
T 3rtk_A 133 GAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEA 211 (546)
T ss_dssp TCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBE
T ss_pred hcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCee
Confidence 57899988 99999999998 99999999999999999999998877676655589999999999999999999999999
Q ss_pred eecCeeEEEecccCCCHHHHHHHHHHHHhcCCCEEEEeccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHH
Q 015120 80 EYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIA 159 (413)
Q Consensus 80 ~~~~~~Ili~d~~i~~~~~~~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la 159 (413)
+++||+||++|++|+++++++++++++.++|+|||||+++|+++++++|+.|+++|+++++|||+|+||+.++++|+|||
T Consensus 212 ~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia 291 (546)
T 3rtk_A 212 VLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMA 291 (546)
T ss_dssp EEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHH
T ss_pred EecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeecCcCccccCCCCcccccceEEEEcCCeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhc
Q 015120 160 ILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLS 239 (413)
Q Consensus 160 ~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~ 239 (413)
++|||++++++++++++++++++||+|+.|++++++++||++|+++..++.|+++|+.++++++++|+|++|+||+++|+
T Consensus 292 ~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~ 371 (546)
T 3rtk_A 292 ILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLA 371 (546)
T ss_dssp HHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHH
T ss_pred HHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhhhcCccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHH
Q 015120 240 GGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPL 319 (413)
Q Consensus 240 g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip 319 (413)
|++|||+|||+|+.+++|+||+++||||++|+++++|+|||||++|+++|.+|++++ +++.+| +++++|++||+.||
T Consensus 372 g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e~~~s~~L~~~~--~~g~eq-~~i~~~a~ALe~ip 448 (546)
T 3rtk_A 372 GGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPTLDELK--LEGDEA-TGANIVKVALEAPL 448 (546)
T ss_dssp HCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHTTGGGSTTSC--CCTTHH-HHHHHHHHHTTHHH
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHHHHHHHHHHHhc--cccHHH-HHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999887 678888 69999999999999
Q ss_pred HHHHHhcCCCchhhHHhhhccCCCceeeecCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCCCCCC
Q 015120 320 KLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 399 (413)
Q Consensus 320 ~~L~~NaG~d~~~i~~kl~~~~~~~~G~d~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~ 399 (413)
++||+|||+|+.+++.+|++. ...+|||+.+|+++||++.|||||+.||+++|++|+|+|++|||||++|...|+++|+
T Consensus 449 ~~La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~~ 527 (546)
T 3rtk_A 449 KQIAFNSGLEPGVVAEKVRNL-PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKEKA 527 (546)
T ss_dssp HHHHTTTTCCHHHHHHHHHHS-CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC------------
T ss_pred HHHHHHcCCCHHHHHHHHHhh-cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999985 4558999999999999999999999999999999999999999999999999877655
Q ss_pred CC-CCCCCCCCC
Q 015120 400 MP-AGNPMDNSG 410 (413)
Q Consensus 400 ~~-~~~~~~~~~ 410 (413)
++ |+|.+..|.
T Consensus 528 ~~~~~~~~~~~~ 539 (546)
T 3rtk_A 528 SVPGGGDMGGMD 539 (546)
T ss_dssp ------------
T ss_pred CCCCCCCcCccc
Confidence 43 444444333
No 3
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=5.7e-89 Score=713.61 Aligned_cols=394 Identities=52% Similarity=0.820 Sum_probs=381.0
Q ss_pred CccccCCh-hHHHHHHHhcCCchhHHHHHHHHHHHhccCCceeeecCCccccceeeeeceEEecccccCccccCcccCee
Q 015120 1 MSKEVEDS-ELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAV 79 (413)
Q Consensus 1 ~a~pv~~~-~L~~VA~ts~~~~~~la~lv~~Ai~~vg~~~~I~~~~g~s~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~ 79 (413)
+|+|++++ +|.+||+||++++++|++++++|+.+++.+|+|+++.|++++|++++++|++|+++|.||||++++++|++
T Consensus 133 ~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~ 212 (547)
T 1kp8_A 133 LSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAV 212 (547)
T ss_dssp HCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBE
T ss_pred hCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCce
Confidence 47889888 99999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred eecCeeEEEecccCCCHHHHHHHHHHHHhcCCCEEEEeccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHH
Q 015120 80 EYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIA 159 (413)
Q Consensus 80 ~~~~~~Ili~d~~i~~~~~~~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la 159 (413)
+++||+||++|++|+++++++++++++.++|+||||++++|+++++++|+.|+++|.++|+|||+|+||+.++.+|+|||
T Consensus 213 ~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia 292 (547)
T 1kp8_A 213 ELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIA 292 (547)
T ss_dssp EEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHH
T ss_pred EecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeecCcCccccCCCCcccccceEEEEcCCeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhc
Q 015120 160 ILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLS 239 (413)
Q Consensus 160 ~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~ 239 (413)
++|||+++++++|++++++++++||+|+.|++++++|+||++|++++.++.|+++|+.+++.++++|+|++|+||+++|+
T Consensus 293 ~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~ 372 (547)
T 1kp8_A 293 TLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLA 372 (547)
T ss_dssp HHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHH
T ss_pred HHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhc
Confidence 99999999998999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhhhcCccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHH
Q 015120 240 GGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPL 319 (413)
Q Consensus 240 g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip 319 (413)
|++|||+|||+|+.+++|+||+++||||++|+++++|+|||||++|++++.+|++++. .++.+| +++++|++||+.||
T Consensus 373 ~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~~q-~~i~~~a~ALe~ip 450 (547)
T 1kp8_A 373 GGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG-QNADQN-VGIKVALRAMEAPL 450 (547)
T ss_dssp HCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHTTTCCC-SSHHHH-HHHHHHHHHTTHHH
T ss_pred CCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHHHHHHHhc-cCchHH-HHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998876 667776 69999999999999
Q ss_pred HHHHHhcCCCchhhHHhhhccCCCceeeecCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCCCC
Q 015120 320 KLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE 397 (413)
Q Consensus 320 ~~L~~NaG~d~~~i~~kl~~~~~~~~G~d~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~ 397 (413)
++||+|||+|+.+++.+|++. +.++|||+.+|+++||++.|||||+.||+++|++|+|+|++|||||++|...|+++
T Consensus 451 ~~la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~ 527 (547)
T 1kp8_A 451 RQIVLNCGEEPSVVANTVKGG-DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKND 527 (547)
T ss_dssp HHHHHHHTSCHHHHHHHHHHS-CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC--
T ss_pred HHHHHHcCCCHHHHHHHHHhc-CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCccC
Confidence 999999999999999999976 57899999999999999999999999999999999999999999999999988765
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=6.3e-89 Score=713.63 Aligned_cols=396 Identities=51% Similarity=0.818 Sum_probs=338.7
Q ss_pred CccccCCh-hHHHHHHHhcCCchhHHHHHHHHHHHhccCCceeeecCCccccceeeeeceEEecccccCccccCcccCee
Q 015120 1 MSKEVEDS-ELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAV 79 (413)
Q Consensus 1 ~a~pv~~~-~L~~VA~ts~~~~~~la~lv~~Ai~~vg~~~~I~~~~g~s~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~ 79 (413)
+|+|++++ +|.+||+||++++++|++++++|+.+++.+|+|+++.|++++|++++++|++|+++|.||||++++++|++
T Consensus 134 ~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~ 213 (545)
T 1iok_A 134 AARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIA 213 (545)
T ss_dssp TCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCE
T ss_pred hcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCce
Confidence 57899887 99999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred eecCeeEEEecccCCCHHHHHHHHHHHHhcCCCEEEEeccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHH
Q 015120 80 EYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIA 159 (413)
Q Consensus 80 ~~~~~~Ili~d~~i~~~~~~~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la 159 (413)
+++||+||++|++|+++++++++++++.+.|+||||++++|+++++++|+.|+++|.++|+|||+|+||+.++.+|+|||
T Consensus 214 ~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia 293 (545)
T 1iok_A 214 ELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIA 293 (545)
T ss_dssp EEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHH
T ss_pred eecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeecCcCccccCCCCcccccceEEEEcCCeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhc
Q 015120 160 ILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLS 239 (413)
Q Consensus 160 ~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~ 239 (413)
++|||+++++++|++++++++++||+|+.|++++++|+||++|+++..+++|+++++.+++.++++|+|++|+||+++|+
T Consensus 294 ~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~ 373 (545)
T 1iok_A 294 ILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLA 373 (545)
T ss_dssp HHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTS
T ss_pred HhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhcc
Confidence 99999999998999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhhhcCccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHH
Q 015120 240 GGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPL 319 (413)
Q Consensus 240 g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip 319 (413)
|++|||+|||+|+.+++|.||+++||||++|+++++|+|||||++|++++.+|++++. .++.+| +++++|++||+.||
T Consensus 374 ~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~~q-~~i~~~a~ALe~ip 451 (545)
T 1iok_A 374 GGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSG-ANSDQD-AGIAIIRRALEAPM 451 (545)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGGGGGSCCC-SSHHHH-HHHHHHHHHTTHHH
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhc-cCchHH-HHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998876 667777 69999999999999
Q ss_pred HHHHHhcCCCchhhHHhhhccCCCceeeecCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCCCCC
Q 015120 320 KLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEP 398 (413)
Q Consensus 320 ~~L~~NaG~d~~~i~~kl~~~~~~~~G~d~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~ 398 (413)
++||+|||+|+.+++.+|++..+.++|||+.+|+++||++.|||||+.||+++|++|+|+|++|||||++|...|++++
T Consensus 452 ~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~ 530 (545)
T 1iok_A 452 RQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPEPKA 530 (545)
T ss_dssp HHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC----
T ss_pred HHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCccCC
Confidence 9999999999999999999764678999999999999999999999999999999999999999999999999886554
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=2.1e-72 Score=592.65 Aligned_cols=365 Identities=18% Similarity=0.245 Sum_probs=300.8
Q ss_pred CccccC--Ch-hHHHHHHHh------cCCchhHHHHHHHHHHHhccCCc------------------eeeecCCccccce
Q 015120 1 MSKEVE--DS-ELADVAAVS------AGNNYEVGNMIAEAMSKVGRKGV------------------VTLEEGKSAENML 53 (413)
Q Consensus 1 ~a~pv~--~~-~L~~VA~ts------~~~~~~la~lv~~Ai~~vg~~~~------------------I~~~~g~s~~ds~ 53 (413)
+|+|++ ++ .|.+||+|| ++++++|++|+++|+.+++.++. |.+..|+++.|+
T Consensus 139 ~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds- 217 (590)
T 3p9d_C 139 VSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS- 217 (590)
T ss_dssp HCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC-
T ss_pred HhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc-
Confidence 367777 35 899999987 24689999999999999987542 233569999998
Q ss_pred eeeeceEEecccccCccccCcccCeeeecCeeEEEeccc-------------CCCHHHHHHHH-----------HHHHhc
Q 015120 54 YVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDLINVL-----------EDAIRG 109 (413)
Q Consensus 54 ~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~~~~~l-----------e~i~~~ 109 (413)
++++|++|++++.+|. |+++++||+||++|++ |++++++.+++ +++.+.
T Consensus 218 ~lv~Gmvfdk~~~~~~-------m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~ 290 (590)
T 3p9d_C 218 RVLKGVLLNKDVVHPK-------MSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAV 290 (590)
T ss_dssp BCCSSEEECCCCSCTT-------SCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eeeeEEEEecccCCCC-------CcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999988874 8999999999999994 56777877765 688889
Q ss_pred CCCEEEEeccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCccccc-ceE
Q 015120 110 AYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASK 188 (413)
Q Consensus 110 ~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~-~~~ 188 (413)
|++|||++++|+++++++|..+ +|+|++ +.++.+|+|||++|||++++ +++++++++||+ |+.
T Consensus 291 g~~vII~e~~I~d~Al~~L~k~------~I~av~-----~~~k~~le~ia~~TGa~iis-----~l~~~~~~~LG~~a~~ 354 (590)
T 3p9d_C 291 RPTLVITEKGVSDLAQHYLLKG------GCSVLR-----RVKKSDNNRIARVTGATIVN-----RVEDLKESDVGTNCGL 354 (590)
T ss_dssp CCSEECCSSCCCTHHHHHHHHT------TCCCCC-----CCCHHHHHHHHHHHTCCCCS-----CSTTCCTTSCBCCCSE
T ss_pred CCcEEEecCCcCHHHHHHHHhc------cceeec-----cCCHHHHHHHHHHhCCceee-----cccCCCHHHhCCcCCE
Confidence 9999999999999999997643 456554 77999999999999999999 899999999999 999
Q ss_pred EE---EcCCeEEEEcCCCChhh--------------------------HHHHHHHHHHHHHhhchHHHHHHHHHHHHHhc
Q 015120 189 VV---LTKDTTTIVGDGSTQDA--------------------------VSKRVAQIRTLIENAEQDYEREKLNERIAKLS 239 (413)
Q Consensus 189 v~---i~~~~~~~~~~~~~~~~--------------------------i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~ 239 (413)
|+ +++++|+||+||+++.. +++|+++|+.+++.++++|+++ +++|+
T Consensus 355 v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l~ 429 (590)
T 3p9d_C 355 FKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHGS 429 (590)
T ss_dssp EECCEETTEECEEECC--------------------------------------------------------------CC
T ss_pred EEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhhc
Confidence 97 57899999999999888 9999999999999999999866 47899
Q ss_pred CCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhhhcC-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHH
Q 015120 240 GGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYP 318 (413)
Q Consensus 240 g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~i 318 (413)
|++|||+|||+|+.+++|.||+++||||++|+++++| +|||||++|+++|.+|++++.++++.+| +|+++|++||+.|
T Consensus 430 ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~i 508 (590)
T 3p9d_C 430 GKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQ-WPYQAVADAMECI 508 (590)
T ss_dssp CSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTH-HHHHHHHHHTTHH
T ss_pred CCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHH-HHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999996 9999999999999999999888889998 6999999999999
Q ss_pred HHHHHHhcCCCchhhHHhhhcc---CCCceeeecCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCC
Q 015120 319 LKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 395 (413)
Q Consensus 319 p~~L~~NaG~d~~~i~~kl~~~---~~~~~G~d~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~ 395 (413)
|++||+|||+|+.+++.+|++. +++++|||+.+|+++||++.|||||+.||+++|++|+|+|++|||||++|...|+
T Consensus 509 p~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 588 (590)
T 3p9d_C 509 PRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRK 588 (590)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC-
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999873 5678999999999999999999999999999999999999999999999987764
No 6
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=3.1e-70 Score=568.82 Aligned_cols=351 Identities=22% Similarity=0.309 Sum_probs=294.3
Q ss_pred CccccC--Ch-hHHHHHHHh------cCCchhHHHHHHHHHHHhccC--Cc--------eee--ecCCccccceeeeece
Q 015120 1 MSKEVE--DS-ELADVAAVS------AGNNYEVGNMIAEAMSKVGRK--GV--------VTL--EEGKSAENMLYVVEGM 59 (413)
Q Consensus 1 ~a~pv~--~~-~L~~VA~ts------~~~~~~la~lv~~Ai~~vg~~--~~--------I~~--~~g~s~~ds~~~i~G~ 59 (413)
+|+|++ |+ +|.+||+|| ++++++|++++++|+.+++.+ |. |++ .+|++++|+ ++++|+
T Consensus 92 ~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~ds-~lv~G~ 170 (500)
T 3aq1_B 92 ITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSIDDS-ELIDGL 170 (500)
T ss_dssp HCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGGGC-EEESEE
T ss_pred hcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCccce-EEEeee
Confidence 367887 36 999999976 668999999999999999865 42 444 389999888 799999
Q ss_pred EEecccccCccccCcccCeeeecCeeEEEeccc-------------CCCHHHH-----------HHHHHHHHhcCCCEEE
Q 015120 60 QFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDL-----------INVLEDAIRGAYPILI 115 (413)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~~-----------~~~le~i~~~~~~lvI 115 (413)
+|+++|.||+ |+++++||+||+++++ |++++++ .++++++.++|+||||
T Consensus 171 v~dk~~~~~~-------m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi 243 (500)
T 3aq1_B 171 VIDKERSHPN-------MPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVVF 243 (500)
T ss_dssp EESCCCSSTT-------SCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCSEEE
T ss_pred EEeecCCCCC-------CcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEE
Confidence 9999999998 5889999999999998 7888886 7789999999999999
Q ss_pred EeccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEEc---
Q 015120 116 IAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT--- 192 (413)
Q Consensus 116 ~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i~--- 192 (413)
++++|+++++++|..+ +|+||+ +.++++|+|||++|||++++ +++++++++||+|+.|++.
T Consensus 244 ~~~~I~~~al~~L~~~------~I~av~-----~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig 307 (500)
T 3aq1_B 244 CQKGIDDMAQYYIEKA------GIYAVR-----RVKKSDLKRLSKVTGATIIQ-----DLDQITTEDVGTAGLVEEKEVR 307 (500)
T ss_dssp ESSCBCHHHHHHHHHT------TCEEEC-----SCCHHHHHHHHHHHCCCCBS-----CTTCCCSTTCEEEEEEEEEECS
T ss_pred ECCCcCHHHHHHHHHC------CEEEEE-----eCCHHHHHHHHHHhCCeEec-----ccccCCHhHCCCceEEEEEEec
Confidence 9999999999997753 478887 66999999999999999999 8999999999999999964
Q ss_pred CCeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHHHh
Q 015120 193 KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA 272 (413)
Q Consensus 193 ~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a 272 (413)
+++|+||++|+++ ++|||+|||+|+.+++|.||+++||||++|++
T Consensus 308 ~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~ 352 (500)
T 3aq1_B 308 GGKMTYVTGCQNS-----------------------------------KAVTVLLHGGTEHVVDSLDHALNDALHVVGVV 352 (500)
T ss_dssp SSEEEEEEEETTC-----------------------------------CCEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEECCCCC-----------------------------------ceEEEEecCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999998864 79999999999999999999999999999999
Q ss_pred hhcC-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc---CCCceeee
Q 015120 273 VEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYN 348 (413)
Q Consensus 273 l~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~---~~~~~G~d 348 (413)
+++| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.++|||
T Consensus 353 ~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d 431 (500)
T 3aq1_B 353 IEDGKVVVGGGSSEVELSLRLSEYASTLKGREQ-LAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLN 431 (500)
T ss_dssp HHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHH-HHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEEC
T ss_pred HHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEe
Confidence 9999 9999999999999999999988889888 69999999999999999999999999999999863 45689999
Q ss_pred cCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCC--CCCCCCCCCC
Q 015120 349 AATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP--AGNPMDNSGY 411 (413)
Q Consensus 349 ~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~~~--~~~~~~~~~~ 411 (413)
+.+|+++||++.|||||+.||+++|++|+|+|++|||||++|...|+++|+|+ +.++|+.|.|
T Consensus 432 ~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~g~~~~~~~~~~ 496 (500)
T 3aq1_B 432 VYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASKGSANQGMGPGGLPDMPDLDM 496 (500)
T ss_dssp TTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC---------------------------
T ss_pred CCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999887666542 1244555554
No 7
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=3.4e-70 Score=573.31 Aligned_cols=339 Identities=25% Similarity=0.356 Sum_probs=304.5
Q ss_pred CccccC--Ch-hHHHHHHHhcC------CchhHHHHHHHHHHHhccC-Cc-----eee--ecCCccccceeeeeceEEec
Q 015120 1 MSKEVE--DS-ELADVAAVSAG------NNYEVGNMIAEAMSKVGRK-GV-----VTL--EEGKSAENMLYVVEGMQFDR 63 (413)
Q Consensus 1 ~a~pv~--~~-~L~~VA~ts~~------~~~~la~lv~~Ai~~vg~~-~~-----I~~--~~g~s~~ds~~~i~G~~~~~ 63 (413)
+|+|++ |+ .|.+||+||.+ ++++|++++++|+.+++.+ |. |++ ..|+++.|+ ++++|++|++
T Consensus 138 ~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk 216 (543)
T 3ruv_A 138 IACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDK 216 (543)
T ss_dssp HCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESC
T ss_pred hhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEec
Confidence 367887 67 99999999965 4899999999999999986 64 554 478898888 7999999999
Q ss_pred ccccCccccCcccCeeeecCeeEEEeccc-------------CCCHHH-----------HHHHHHHHHhcCCCEEEEecc
Q 015120 64 GYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARD-----------LINVLEDAIRGAYPILIIAED 119 (413)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~-----------~~~~le~i~~~~~~lvI~~~~ 119 (413)
+|.||+ |+++++||||+++|++ |+++++ +.++++++.+.|+|||||+++
T Consensus 217 ~~~~~~-------m~~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~ 289 (543)
T 3ruv_A 217 ERVSAQ-------MPKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKG 289 (543)
T ss_dssp CCSCTT-------SCSEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSC
T ss_pred cccCcc-------ccccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 999998 6889999999999994 677777 445678999999999999999
Q ss_pred CchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEE---cCCeE
Q 015120 120 IEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTT 196 (413)
Q Consensus 120 i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~ 196 (413)
|+++++++|. + .++++|+ ++++++|+|||++|||++++ +++++++++||+|+.|++ ++++|
T Consensus 290 I~~~al~~L~--~----~gI~~v~-----~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~ 353 (543)
T 3ruv_A 290 IDDLAQHYLA--K----EGIVAAR-----RVKKSDMEKLAKATGANVIA-----AIAALSAQDLGDAGLVEERKISGDSM 353 (543)
T ss_dssp BCHHHHHHHH--H----TTCEEEC-----SCCHHHHHHHHHHHCCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEE
T ss_pred ccHHHHHHHH--H----cCcEEEe-----eCCHHHHHHHHHHhCCceec-----ccccCCHHHCCcccEEEEEEeCCceE
Confidence 9999999975 4 4577777 55899999999999999999 899999999999999986 48899
Q ss_pred EEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhhhcC
Q 015120 197 TIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 276 (413)
Q Consensus 197 ~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g 276 (413)
+||++|+++ ..+||+|||+|+++++|.||+++||||++|+++++|
T Consensus 354 ~~i~g~~~~-----------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g 398 (543)
T 3ruv_A 354 IFVEECKHP-----------------------------------KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDG 398 (543)
T ss_dssp EEEECCSSC-----------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEECCCCC-----------------------------------ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999876 589999999999999999999999999999999999
Q ss_pred -ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhc----cCCCceeeecCC
Q 015120 277 -IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLS----SDNHKYGYNAAT 351 (413)
Q Consensus 277 -vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~----~~~~~~G~d~~~ 351 (413)
+|||||++|+++|.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++ .++.++|||+.+
T Consensus 399 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~ 477 (543)
T 3ruv_A 399 RIVSGGGSTEVELSMKLREYAEGISGREQ-LAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFT 477 (543)
T ss_dssp EEEETTTHHHHHHHHHHHHHHHTCCTTHH-HHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTT
T ss_pred CeecCCcHHHHHHHHHHHHHhhcCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCC
Confidence 9999999999999999999988889998 6999999999999999999999999999999986 335789999999
Q ss_pred CcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCCCCCC
Q 015120 352 GNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 399 (413)
Q Consensus 352 g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~ 399 (413)
|++.||++.|||||+.||+++|++|+|+|++|||||++|...|+..|+
T Consensus 478 g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~ 525 (543)
T 3ruv_A 478 GAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLRGAP 525 (543)
T ss_dssp CSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEEC------
T ss_pred CccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheecCccCCCC
Confidence 999999999999999999999999999999999999999998876554
No 8
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=7.6e-70 Score=571.07 Aligned_cols=345 Identities=22% Similarity=0.344 Sum_probs=304.0
Q ss_pred CccccC--Ch-hHHHHHHHhcCC------chhHHHHHHHHHHHhccC--Cc-------eee--ecCCccccceeeeeceE
Q 015120 1 MSKEVE--DS-ELADVAAVSAGN------NYEVGNMIAEAMSKVGRK--GV-------VTL--EEGKSAENMLYVVEGMQ 60 (413)
Q Consensus 1 ~a~pv~--~~-~L~~VA~ts~~~------~~~la~lv~~Ai~~vg~~--~~-------I~~--~~g~s~~ds~~~i~G~~ 60 (413)
+|+|++ |+ .|.+||+||.+. +++|++|+++|+.+++.+ |. |++ ..|+++.|+ ++++|++
T Consensus 149 ~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v 227 (553)
T 3ko1_A 149 LAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIV 227 (553)
T ss_dssp TCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEE
T ss_pred hcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEE
Confidence 467887 67 999999999764 799999999999999975 65 655 378898888 7999999
Q ss_pred EecccccCccccCcccCeeeecCeeEEEeccc-------------CCCHHHHH-----------HHHHHHHhcCCCEEEE
Q 015120 61 FDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDLI-----------NVLEDAIRGAYPILII 116 (413)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~~~-----------~~le~i~~~~~~lvI~ 116 (413)
|+++|.||+ |+++++||||+++|++ |++++++. ++++++.+.|+||||+
T Consensus 228 ~dk~~~~~~-------m~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~ 300 (553)
T 3ko1_A 228 VDKEVVHPG-------MPKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIIC 300 (553)
T ss_dssp ECSCBSCTT-------SCSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEC
T ss_pred ecccccCCC-------CccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEe
Confidence 999999998 6888999999999994 78888854 4578999999999999
Q ss_pred eccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEEc---C
Q 015120 117 AEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---K 193 (413)
Q Consensus 117 ~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i~---~ 193 (413)
+++|+++++++|. + .++++|+ ++++++|+|||++|||++++ +++++++++||+|+.|++. +
T Consensus 301 ~~~I~~~al~~L~--~----~gI~~v~-----~v~k~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~ 364 (553)
T 3ko1_A 301 QKGIDEVAQSYLA--K----KGVLAVR-----RAKKSDLEKLARATGGRVVS-----NIDEISEQDLGYASLIEERKVGE 364 (553)
T ss_dssp SSCBCSHHHHHHH--H----HTCEEEC-----CCCHHHHHHHHTTTTCCEES-----CGGGCCSSSSEECSEEECCCCSS
T ss_pred ccChHHHHHHHHH--h----cchhhhh-----hhhhhhHHHHHHhhCCeeec-----ccccCChhhcchHHHHHHhhcCc
Confidence 9999999999975 3 3567777 55899999999999999999 8999999999999999964 8
Q ss_pred CeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhh
Q 015120 194 DTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAV 273 (413)
Q Consensus 194 ~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al 273 (413)
++|+||++|+++ ..+||+|||+|+++++|.||+++||||++|+++
T Consensus 365 d~~~~i~g~~~~-----------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av 409 (553)
T 3ko1_A 365 DKMVFVEGAKNP-----------------------------------KSISILIRGGLERLVDETERALRDALGTVADVI 409 (553)
T ss_dssp SCCEEEESCSSS-----------------------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEeccCCCC-----------------------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999876 589999999999999999999999999999999
Q ss_pred hcC-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc---CC-Cceeee
Q 015120 274 EEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DN-HKYGYN 348 (413)
Q Consensus 274 ~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~---~~-~~~G~d 348 (413)
++| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++ .++|||
T Consensus 410 ~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d 488 (553)
T 3ko1_A 410 KDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQ-LAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGID 488 (553)
T ss_dssp HHCEEEETTTHHHHHHHHHHHHHHHHHCSHHH-HHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEE
T ss_pred hcCceecCCceeEeHHHHHHHHhccccCChhH-hHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEE
Confidence 999 9999999999999999999888889998 69999999999999999999999999999999874 23 679999
Q ss_pred cCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCCCC
Q 015120 349 AATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 405 (413)
Q Consensus 349 ~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~ 405 (413)
+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|++.|.++++++
T Consensus 489 ~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~~~~~~ 545 (553)
T 3ko1_A 489 LYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSAGKKSGGESKTPGG 545 (553)
T ss_dssp TTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEECCC-------------
T ss_pred eecCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHHHhhhhccCCCCCCCc
Confidence 999999999999999999999999999999999999999999999887777554443
No 9
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.1e-69 Score=569.94 Aligned_cols=352 Identities=23% Similarity=0.343 Sum_probs=307.7
Q ss_pred CccccCC--h-hHHHHHHHh------cCCchhHHHHHHHHHHHhccC--C-------ceeee--cCCccccceeeeeceE
Q 015120 1 MSKEVED--S-ELADVAAVS------AGNNYEVGNMIAEAMSKVGRK--G-------VVTLE--EGKSAENMLYVVEGMQ 60 (413)
Q Consensus 1 ~a~pv~~--~-~L~~VA~ts------~~~~~~la~lv~~Ai~~vg~~--~-------~I~~~--~g~s~~ds~~~i~G~~ 60 (413)
+|+|++. + +|.+||+|| ++++++|++++++|+.+++.+ | .|+++ .|++++|+ ++++|++
T Consensus 142 ~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v 220 (548)
T 1q3q_A 142 IAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVRGVV 220 (548)
T ss_dssp HCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEE
T ss_pred hcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEEeeEE
Confidence 3678873 6 999999966 567899999999999999865 3 66665 89999999 7999999
Q ss_pred EecccccCccccCcccCeeeecCeeEEEeccc-------------CCCHHHH-----------HHHHHHHHhcCCCEEEE
Q 015120 61 FDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDL-----------INVLEDAIRGAYPILII 116 (413)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~~-----------~~~le~i~~~~~~lvI~ 116 (413)
|+++|.||+ |+++++||+||++|++ |++++++ .++++++.++|+||||+
T Consensus 221 ~dk~~~~~~-------m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~ 293 (548)
T 1q3q_A 221 IDKEVVHPR-------MPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFV 293 (548)
T ss_dssp ESCCCSSTT-------SCSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred EeccCCCCC-------CcceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEE
Confidence 999999998 5778999999999998 8889987 67789999999999999
Q ss_pred eccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEE---cC
Q 015120 117 AEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TK 193 (413)
Q Consensus 117 ~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i---~~ 193 (413)
+++|+++++++|..| +|+||+ +.++++|+|||++|||++++ +++++++++||+|+.|++ ++
T Consensus 294 ~~~I~~~al~~L~~~------~I~av~-----~~~k~~le~ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~ 357 (548)
T 1q3q_A 294 QKGIDDLAQHYLAKY------GIMAVR-----RVKKSDMEKLAKATGAKIVT-----NVKDLTPEDLGYAEVVEERKLAG 357 (548)
T ss_dssp SSCBCHHHHHHHHHT------TCEEEC-----SCCHHHHHHHHHHHCCCCBS-----SGGGCCGGGCEEESEEEEEEETT
T ss_pred cCCcCHHHHHHHHHC------CcEEEc-----cCCHHHHHHHHHHhCCeEec-----ccccCCHHHCCCceEEEEEEecC
Confidence 999999999998754 478887 66999999999999999999 899999999999999986 48
Q ss_pred CeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhh
Q 015120 194 DTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAV 273 (413)
Q Consensus 194 ~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al 273 (413)
++|+||++|+++ ++|||+|||+|+.+++|.||+++||||++|+++
T Consensus 358 ~~~~~~~g~~~~-----------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~ 402 (548)
T 1q3q_A 358 ENMIFVEGCKNP-----------------------------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVM 402 (548)
T ss_dssp EEEEEEECCSSC-----------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCC-----------------------------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999864 799999999999999999999999999999999
Q ss_pred hcC-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc---CCCceeeec
Q 015120 274 EEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNA 349 (413)
Q Consensus 274 ~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~---~~~~~G~d~ 349 (413)
++| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.++|||+
T Consensus 403 ~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~ 481 (548)
T 1q3q_A 403 EDGAVLPAGGAPEIELAIRLDEYAKQVGGKEA-LAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDV 481 (548)
T ss_dssp HSCEEEECTTHHHHHHHHHHHHHHHHHCHHHH-HHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEET
T ss_pred HCCCcccCCcHHHHHHHHHHHHHhhhcCCcHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeC
Confidence 999 9999999999999999999877788887 69999999999999999999999999999999863 356899999
Q ss_pred CCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCCCCCCC---CCCCCCCCCCCC
Q 015120 350 ATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAM---PAGNPMDNSGYG 412 (413)
Q Consensus 350 ~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~~---~~~~~~~~~~~~ 412 (413)
.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|+++++| .++|+|-.||.|
T Consensus 482 ~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~~g~~~~ 547 (548)
T 1q3q_A 482 FEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKATKPEGGQGGGMPGGMGGMDMG 547 (548)
T ss_dssp TTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECCC---------------------
T ss_pred CCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999988664432 234555555554
No 10
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=2.5e-69 Score=567.15 Aligned_cols=342 Identities=22% Similarity=0.346 Sum_probs=305.2
Q ss_pred CccccCC--h-hHHHHHHHh------cCCchhHHHHHHHHHHHhccC--Cc-------eeee--cCCccccceeeeeceE
Q 015120 1 MSKEVED--S-ELADVAAVS------AGNNYEVGNMIAEAMSKVGRK--GV-------VTLE--EGKSAENMLYVVEGMQ 60 (413)
Q Consensus 1 ~a~pv~~--~-~L~~VA~ts------~~~~~~la~lv~~Ai~~vg~~--~~-------I~~~--~g~s~~ds~~~i~G~~ 60 (413)
+|+|++. + +|.+||+|| ++++++|++++++|+.+++.+ |. |+++ .|++++|+ ++++|++
T Consensus 140 ~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v 218 (543)
T 1a6d_B 140 ISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGII 218 (543)
T ss_dssp HCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEE
T ss_pred hcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEE
Confidence 3678873 5 899999966 567899999999999999875 53 6654 89999999 7999999
Q ss_pred EecccccCccccCcccCeeeecCeeEEEeccc-------------CCCHHHH-----------HHHHHHHHhcCCCEEEE
Q 015120 61 FDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDL-----------INVLEDAIRGAYPILII 116 (413)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~~-----------~~~le~i~~~~~~lvI~ 116 (413)
|+++|.||+ |+++++||+||+++++ |++++++ .++++++.+.|+||||+
T Consensus 219 ~dk~~~~~~-------m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~ 291 (543)
T 1a6d_B 219 VDKEKVHPG-------MPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVIT 291 (543)
T ss_dssp ESCCCSSTT-------SCSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EecCCCCCC-------CcceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 999999998 5778999999999998 8888886 67789999999999999
Q ss_pred eccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEE---cC
Q 015120 117 AEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TK 193 (413)
Q Consensus 117 ~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i---~~ 193 (413)
+++|+++++++|..| +|+||+ +.++++|+|||++|||++++ +++++++++||+|+.|++ ++
T Consensus 292 ~~~I~~~al~~L~~~------~I~av~-----~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~ 355 (543)
T 1a6d_B 292 QKGIDDMAQHYLSRA------GIYAVR-----RVKKSDMDKLAKATGASIVS-----TIDEISSSDLGTAERVEQVKVGE 355 (543)
T ss_dssp SSCBCHHHHHHHHHT------TCEEEC-----SCCHHHHHHHHHHHTCCEES-----CGGGCCGGGCEEEEEEEEEEETT
T ss_pred CCCcCHHHHHHHHHC------CeeEec-----cCCHHHHHHHHHHhCCceec-----ccccCCHHHCCCceEEEEEEecC
Confidence 999999999998754 478887 66999999999999999999 899999999999999996 58
Q ss_pred CeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhh
Q 015120 194 DTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAV 273 (413)
Q Consensus 194 ~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al 273 (413)
++++||++|+++ ++|||+|||+|+.+++|.||+++||||++|+++
T Consensus 356 ~~~~~~~g~~~~-----------------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~ 400 (543)
T 1a6d_B 356 DYMTFVTGCKNP-----------------------------------KAVSILVRGETEHVVDEMERSITDSLHVVASAL 400 (543)
T ss_dssp EEEEEEEEESSS-----------------------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCC-----------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998864 799999999999999999999999999999999
Q ss_pred hcC-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc---CCCceeeec
Q 015120 274 EEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNA 349 (413)
Q Consensus 274 ~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~---~~~~~G~d~ 349 (413)
++| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.++|||+
T Consensus 401 ~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~ 479 (543)
T 1a6d_B 401 EDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQ-LAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINV 479 (543)
T ss_dssp HHCEEEETTTHHHHHHHHHHHHHHHHTCSSHH-HHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEET
T ss_pred HCCCccCCccHHHHHHHHHHHHHhhhcCChHH-HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeC
Confidence 999 9999999999999999999988889888 69999999999999999999999999999999863 456899999
Q ss_pred CCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCC
Q 015120 350 ATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 402 (413)
Q Consensus 350 ~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~~~~ 402 (413)
.+|+++||++.|||||+.||+++|+.|+|+|++|||||++|...|++.|+|+|
T Consensus 480 ~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~~ 532 (543)
T 1a6d_B 480 FTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIATKSSSSSSNPP 532 (543)
T ss_dssp TTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC-----------
T ss_pred CCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCCCC
Confidence 99999999999999999999999999999999999999999998876655443
No 11
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=3.7e-68 Score=554.77 Aligned_cols=334 Identities=18% Similarity=0.267 Sum_probs=304.9
Q ss_pred CccccC-----Ch-hHHHHHHHhc------CCchhHHHHHHHHHHHhccC---Cceee--ecCCccccceeeeeceEEec
Q 015120 1 MSKEVE-----DS-ELADVAAVSA------GNNYEVGNMIAEAMSKVGRK---GVVTL--EEGKSAENMLYVVEGMQFDR 63 (413)
Q Consensus 1 ~a~pv~-----~~-~L~~VA~ts~------~~~~~la~lv~~Ai~~vg~~---~~I~~--~~g~s~~ds~~~i~G~~~~~ 63 (413)
+|+|++ ++ .|.+||+||. +++++|++++++|+.+++.+ +.|++ ..|+++.|+ ++++|++|++
T Consensus 131 ~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk 209 (513)
T 3iyg_B 131 SAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDK 209 (513)
T ss_pred hCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEec
Confidence 467776 56 8999999774 36789999999999999987 66665 369999998 7999999999
Q ss_pred ccccCccccCcccCeeeecCeeEEEecc--------------cCCCHHHHHH-----------HHHHHHhcCCCEEEEec
Q 015120 64 GYISPYFVTDSEKMAVEYENCKLLLVDK--------------KITNARDLIN-----------VLEDAIRGAYPILIIAE 118 (413)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~Ili~d~--------------~i~~~~~~~~-----------~le~i~~~~~~lvI~~~ 118 (413)
+|.|| |+++++||+||++|+ .|++++++.+ +++++.+.|+||||+++
T Consensus 210 ~~~~~--------m~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~ 281 (513)
T 3iyg_B 210 KIGVN--------QPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQ 281 (513)
T ss_pred cccCC--------CceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 99886 788999999999998 4678888876 57889999999999999
Q ss_pred cCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEE---EcCCe
Q 015120 119 DIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDT 195 (413)
Q Consensus 119 ~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~---i~~~~ 195 (413)
+|+++++++|. + .+|+||++| ++.+|+|||++|||++++ +++++++++||+|+.|+ +++++
T Consensus 282 ~I~~~al~~L~--~----~~I~av~~~-----~~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~ 345 (513)
T 3iyg_B 282 LIYNYPEQLFG--A----AGVMAIEHA-----DFVGVERLALVTGGEIAS-----TFDHPELVKLGSCKLIEEVMIGEDK 345 (513)
T ss_pred CccHHHHHHHH--H----cCceEEecC-----CHHHHHHHHHHhCCEEec-----ccccCCHhHCCcccEEEEEEECCeE
Confidence 99999999965 4 679999988 467899999999999999 89999999999999998 68999
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhhhc
Q 015120 196 TTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEE 275 (413)
Q Consensus 196 ~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~ 275 (413)
++||++|+++ ++|||+|||+|+++++|.||+++||||++|+++++
T Consensus 346 ~~~~~g~~~~-----------------------------------~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~ 390 (513)
T 3iyg_B 346 LIHFSGVALG-----------------------------------EACTIVLRGATQQILDEAERSLHDALCVLAQTVKD 390 (513)
T ss_pred EEEEecCCCC-----------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999998854 69999999999999999999999999999999999
Q ss_pred C-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc---CCCceeeecCC
Q 015120 276 G-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAAT 351 (413)
Q Consensus 276 g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~---~~~~~G~d~~~ 351 (413)
+ +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.++|||+.+
T Consensus 391 ~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 469 (513)
T 3iyg_B 391 SRTVYGGGCSEMLMAHAVTQLASRTPGKEA-VAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKE 469 (513)
T ss_pred CcEEeCCcHHHHHHHHHHHHHhhccCcHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCC
Confidence 6 9999999999999999999888889888 69999999999999999999999999999999873 46789999999
Q ss_pred CcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCC
Q 015120 352 GNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 395 (413)
Q Consensus 352 g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~ 395 (413)
|++.||++.|||||+.||+++|++|+|+|++|||||++|...|+
T Consensus 470 g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 470 GTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPR 513 (513)
T ss_pred CCccchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999988653
No 12
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=7.5e-69 Score=563.39 Aligned_cols=334 Identities=21% Similarity=0.327 Sum_probs=303.0
Q ss_pred ccccC-Ch-hHHHHHHHh------cCCchhHHHHHHHHHHHhccC---------Cceeee--cCCccccceeeeeceEEe
Q 015120 2 SKEVE-DS-ELADVAAVS------AGNNYEVGNMIAEAMSKVGRK---------GVVTLE--EGKSAENMLYVVEGMQFD 62 (413)
Q Consensus 2 a~pv~-~~-~L~~VA~ts------~~~~~~la~lv~~Ai~~vg~~---------~~I~~~--~g~s~~ds~~~i~G~~~~ 62 (413)
|+| + ++ +|.+||+|| ++++++|++++++|+.+++.+ +.|+++ +|++++|+ ++++|++|+
T Consensus 142 s~~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~d 219 (545)
T 1a6d_A 142 AEK-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVID 219 (545)
T ss_dssp CEE-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEES
T ss_pred cCC-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEe
Confidence 566 6 66 999999977 567899999999999999865 367665 89999999 799999999
Q ss_pred cccccCccccCcccCeeeecCeeEEEeccc-------------CCCHHHH-----------HHHHHHHHhcCCCEEEEec
Q 015120 63 RGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAE 118 (413)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~~-----------~~~le~i~~~~~~lvI~~~ 118 (413)
++|.||+ |+++++||+||++|++ |++++++ .++++++.++|+||||+++
T Consensus 220 k~~~~~~-------m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~ 292 (545)
T 1a6d_A 220 KEKVHSK-------MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQK 292 (545)
T ss_dssp CCCSCTT-------SCSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESS
T ss_pred ccCCCCC-------CcceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECC
Confidence 9999998 5778999999999998 7888886 6778999999999999999
Q ss_pred cCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEE---cCCe
Q 015120 119 DIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDT 195 (413)
Q Consensus 119 ~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i---~~~~ 195 (413)
+|+++++++|+.| +|+||+ +.++++|+|||++|||++++ +++++++++||+|+.|++ ++++
T Consensus 293 ~I~~~al~~L~~~------~I~av~-----~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~ 356 (545)
T 1a6d_A 293 GIDDVAQHYLAKE------GIYAVR-----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEERKIGDDR 356 (545)
T ss_dssp CBCHHHHHHHHHH------TCEEEC-----SCCHHHHHHHHHHHCCCEES-----SGGGCCGGGCEEEEEEEEEEETTEE
T ss_pred CccHHHHHHHHHC------CeeEec-----cCCHHHHHHHHHHhCCeeec-----ccccCCHHHCCCceEEEEEEecCce
Confidence 9999999998764 478887 66999999999999999999 899999999999999996 4799
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhhhc
Q 015120 196 TTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEE 275 (413)
Q Consensus 196 ~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~ 275 (413)
|+||++|+++ ++|||+|||+|+.+++|.||+++||||++|+++++
T Consensus 357 ~~~~~g~~~~-----------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~ 401 (545)
T 1a6d_A 357 MTFVMGCKNP-----------------------------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKED 401 (545)
T ss_dssp EEEEEEESCS-----------------------------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCC-----------------------------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999998864 79999999999999999999999999999999999
Q ss_pred C-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc---CCCceeeecCC
Q 015120 276 G-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAAT 351 (413)
Q Consensus 276 g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~---~~~~~G~d~~~ 351 (413)
| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.++|||+.+
T Consensus 402 g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 480 (545)
T 1a6d_A 402 GKFLWGGGAVEAELAMRLAKYANSVGGREQ-LAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDN 480 (545)
T ss_dssp CEEEETTTHHHHHHHHHHHHHHHTSCHHHH-HHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTT
T ss_pred CCEEeCcCHHHHHHHHHHHHHhhccCccHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeccc
Confidence 9 9999999999999999999988888888 69999999999999999999999999999999863 45689999999
Q ss_pred CcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCCC
Q 015120 352 GNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEP 396 (413)
Q Consensus 352 g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~ 396 (413)
|++.||++.|||||+.||+++|++|+|+|++|||||++|...|++
T Consensus 481 g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 481 NGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKST 525 (545)
T ss_dssp TEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC------
T ss_pred CccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 999999999999999999999999999999999999999998866
No 13
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.8e-68 Score=554.65 Aligned_cols=336 Identities=17% Similarity=0.235 Sum_probs=302.1
Q ss_pred CccccC--C----h-hHHHHHHHhc------CCchhHHHHHHHHHHHhccC---Cceee--ecCCccccceeeeeceEEe
Q 015120 1 MSKEVE--D----S-ELADVAAVSA------GNNYEVGNMIAEAMSKVGRK---GVVTL--EEGKSAENMLYVVEGMQFD 62 (413)
Q Consensus 1 ~a~pv~--~----~-~L~~VA~ts~------~~~~~la~lv~~Ai~~vg~~---~~I~~--~~g~s~~ds~~~i~G~~~~ 62 (413)
+|+|++ + + .|.+||+||. +++++|++++++|+.+++.+ +.|++ ..|+++.|+ ++++|++|+
T Consensus 130 ~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~d 208 (515)
T 3iyg_H 130 IAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFK 208 (515)
T ss_pred hhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEe
Confidence 467774 5 5 7799999875 47899999999999999876 66655 468899998 799999999
Q ss_pred cccccCccccCcccCeeeecCeeEEEeccc-------------CCCHHHHH-----------HHHHHHHhcCCCEEEEec
Q 015120 63 RGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDLI-----------NVLEDAIRGAYPILIIAE 118 (413)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~~~-----------~~le~i~~~~~~lvI~~~ 118 (413)
++|.||+|.+ +|++++||+||++|++ |++++++. ++++++.+.|+||||+++
T Consensus 209 k~~~~p~~~~----~p~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~ 284 (515)
T 3iyg_H 209 KTFSYAGFEM----QPKKYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKL 284 (515)
T ss_pred cCccCccccc----CCccccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECC
Confidence 9999999864 5678999999999994 78888874 458899999999999999
Q ss_pred cCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEE---cCCe
Q 015120 119 DIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDT 195 (413)
Q Consensus 119 ~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i---~~~~ 195 (413)
+|++.++++ +++ .++++++ +.++++|+|||++|||++++ +++++++++||+|+.|++ ++++
T Consensus 285 ~I~dla~~~--l~~----~gI~~v~-----~~~k~~leria~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~ 348 (515)
T 3iyg_H 285 PIGDVATQY--FAD----RDMFCAG-----RVPEEDLKRTMMACGGSIQT-----SVNALSSDVLGRCQVFEETQIGGER 348 (515)
T ss_pred cccHHHHHH--HHH----cCCcccc-----cccHHHHHHHHHHhCCEEee-----ccccCCHHHCCcccEEEEEEEcCeE
Confidence 999977776 455 4456665 66899999999999999999 899999999999999985 4789
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhhhc
Q 015120 196 TTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEE 275 (413)
Q Consensus 196 ~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~ 275 (413)
++||++|+++ +.|||+|||+|+++++|.||+++||||++|+++++
T Consensus 349 ~~~i~g~~~~-----------------------------------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~ 393 (515)
T 3iyg_H 349 YNFFTGCPKA-----------------------------------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKN 393 (515)
T ss_pred EEEEecCCCC-----------------------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999875 58999999999999999999999999999999999
Q ss_pred C-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc---CCCceeeecCC
Q 015120 276 G-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAAT 351 (413)
Q Consensus 276 g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~---~~~~~G~d~~~ 351 (413)
+ +|||||++|+++|.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.++|||+.+
T Consensus 394 ~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 472 (515)
T 3iyg_H 394 DSVVAGGGAIEMELSKYLRDYSRTIPGKQQ-LLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINT 472 (515)
T ss_pred CCeecCCcHHHHHHHHHHHHHHhcCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCC
Confidence 6 9999999999999999999988889998 69999999999999999999999999999999874 45679999999
Q ss_pred CcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhcc
Q 015120 352 GNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI 393 (413)
Q Consensus 352 g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~ 393 (413)
|+++||++.|||||+.||+++|++|+|+|++|||||++|++.
T Consensus 473 g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 473 EDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred CcccccHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999754
No 14
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.5e-68 Score=555.36 Aligned_cols=338 Identities=21% Similarity=0.255 Sum_probs=301.3
Q ss_pred CccccC--Ch-hHHHHHHHhc------CCchhHHHHHHHHHHHhc---cCC-----c--ee--eecCCccccceeeeece
Q 015120 1 MSKEVE--DS-ELADVAAVSA------GNNYEVGNMIAEAMSKVG---RKG-----V--VT--LEEGKSAENMLYVVEGM 59 (413)
Q Consensus 1 ~a~pv~--~~-~L~~VA~ts~------~~~~~la~lv~~Ai~~vg---~~~-----~--I~--~~~g~s~~ds~~~i~G~ 59 (413)
+|+|++ |+ .|.+||+||. +++++|++++++|+.+++ .+| + |+ +..|+++.|+ ++++|+
T Consensus 130 ~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~ 208 (529)
T 3iyg_A 130 LIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGY 208 (529)
T ss_pred cccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeee
Confidence 467887 66 9999999995 468999999999999997 333 2 43 3689999998 799999
Q ss_pred EEecccccCccccCcccCeeeecCeeEEEeccc-------------CCCHHHHH-----------HHHHHHHhcCCCEEE
Q 015120 60 QFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDLI-----------NVLEDAIRGAYPILI 115 (413)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~~~-----------~~le~i~~~~~~lvI 115 (413)
+|+++|.||+ |+++++||||++++++ |++++++. ++++++.+.|+||||
T Consensus 209 v~dk~~~~~~-------m~~~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi 281 (529)
T 3iyg_A 209 ALNCVVGSQG-------MPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVIL 281 (529)
T ss_pred EEecCccccc-------CCcccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999998 6889999999999996 45555544 457889999999999
Q ss_pred EeccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCcc-ccCCCCcccccceEEE---E
Q 015120 116 IAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLA-LDKVGKEVLGNASKVV---L 191 (413)
Q Consensus 116 ~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~-l~~~~~~~lG~~~~v~---i 191 (413)
++++|+++++++|..| +|+||+ +.++++|+|||++|||+++++..+++ .+++++++||+|+.|+ +
T Consensus 282 ~~~~I~d~al~~L~~~------gI~av~-----~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~i 350 (529)
T 3iyg_A 282 TTGGIDDMCLKYFVEA------GAMAVR-----RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERI 350 (529)
T ss_pred ECCCCCHHHHHHHHHc------CCceec-----cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEe
Confidence 9999999999997654 578888 56899999999999999999544443 2456678999999998 7
Q ss_pred cCCeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHHH
Q 015120 192 TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKA 271 (413)
Q Consensus 192 ~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~ 271 (413)
++++++||++|+++ ++|||+|||+|+++++|.||+++||||++|+
T Consensus 351 g~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~ 395 (529)
T 3iyg_A 351 CDDELILIKNTKAR-----------------------------------TSASVILRGANDFMCDEMERSLHDALCVVKR 395 (529)
T ss_pred CCceEEEEEcCCCC-----------------------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999875 6999999999999999999999999999999
Q ss_pred hhhcC-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc---CC-----
Q 015120 272 AVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DN----- 342 (413)
Q Consensus 272 al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~---~~----- 342 (413)
++++| +|||||++|+++|.+|++++.++++++| +++++|++||+.||++||+|||+|+.+++.+|++. ++
T Consensus 396 ~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq-~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~ 474 (529)
T 3iyg_A 396 VLESKSVVPGGGAVEAALSIYLENYATSMGSREQ-LAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPER 474 (529)
T ss_pred HhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccccccc
Confidence 99999 9999999999999999999988899998 69999999999999999999999999999999863 22
Q ss_pred ---CceeeecCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhcc
Q 015120 343 ---HKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI 393 (413)
Q Consensus 343 ---~~~G~d~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~ 393 (413)
.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...
T Consensus 475 ~~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (529)
T 3iyg_A 475 KNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLH 528 (529)
T ss_pred ccCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Confidence 579999999999999999999999999999999999999999999999874
No 15
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=6.7e-69 Score=564.93 Aligned_cols=342 Identities=24% Similarity=0.335 Sum_probs=307.5
Q ss_pred CccccCC--h-hHHHHHHHhcCC------chhHHHHHHHHHHHhcc-----CCc-----eee--ecCCccccceeeeece
Q 015120 1 MSKEVED--S-ELADVAAVSAGN------NYEVGNMIAEAMSKVGR-----KGV-----VTL--EEGKSAENMLYVVEGM 59 (413)
Q Consensus 1 ~a~pv~~--~-~L~~VA~ts~~~------~~~la~lv~~Ai~~vg~-----~~~-----I~~--~~g~s~~ds~~~i~G~ 59 (413)
+|+|++. + .|.+||+||.+. +++|++|+++|+.++++ ++. |++ ..|++++|+ ++++|+
T Consensus 144 ~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~ 222 (559)
T 3p9d_A 144 LSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGY 222 (559)
T ss_dssp TGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEE
T ss_pred cccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccE
Confidence 5788884 5 899999999764 89999999999999983 233 332 459999998 799999
Q ss_pred EEecccccCccccCcccCeeeec--CeeEEEecccC-------------CCHHH-----------HHHHHHHHHhcCCCE
Q 015120 60 QFDRGYISPYFVTDSEKMAVEYE--NCKLLLVDKKI-------------TNARD-----------LINVLEDAIRGAYPI 113 (413)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~--~~~Ili~d~~i-------------~~~~~-----------~~~~le~i~~~~~~l 113 (413)
+|+++|.||+ |+++++ ||+|++++++| +++++ +.++++++.+.|+||
T Consensus 223 v~dk~~~~~~-------m~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~l 295 (559)
T 3p9d_A 223 ALNCTVASQA-------MPKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQV 295 (559)
T ss_dssp CCCCCCSSTT-------SCSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred EEeecccCCC-------cceeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCE
Confidence 9999999998 678899 99999999985 45555 567799999999999
Q ss_pred EEEeccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccc-cCCCCcccccceEEE--
Q 015120 114 LIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLAL-DKVGKEVLGNASKVV-- 190 (413)
Q Consensus 114 vI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l-~~~~~~~lG~~~~v~-- 190 (413)
||++++|+++++++|+.|+ |+||+ +.++.+|+|||++|||+++++..++.+ +++++++||+|+.|+
T Consensus 296 vI~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~ 364 (559)
T 3p9d_A 296 VLTTKGIDDLCLKEFVEAK------IMGVR-----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQA 364 (559)
T ss_dssp EEESSCCCGGGTHHHHHTT------CEEES-----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEE
T ss_pred EEEcCCCCHHHHHHHHHcC------CceEc-----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEE
Confidence 9999999999999987654 68887 668999999999999999996666655 889999999999999
Q ss_pred -EcCCeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHH
Q 015120 191 -LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNAT 269 (413)
Q Consensus 191 -i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~ 269 (413)
+++++|+||+||+++ ++|||+|||+|+.+++|+||+++||||++
T Consensus 365 ~ig~~~~~~~~g~~~~-----------------------------------~~~tI~lrG~te~~l~E~kr~l~DAL~~~ 409 (559)
T 3p9d_A 365 KFSDDECILIKGTSKH-----------------------------------SSSSIILRGANDYSLDEMERSLHDSLSVV 409 (559)
T ss_dssp ECSSCEEECEEEESSS-----------------------------------CCCCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred EEcCceEEEEEcCCCC-----------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 689999999998864 79999999999999999999999999999
Q ss_pred HHhhhcC-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc---CCC--
Q 015120 270 KAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNH-- 343 (413)
Q Consensus 270 k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~---~~~-- 343 (413)
|+++++| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.
T Consensus 410 r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~ 488 (559)
T 3p9d_A 410 KRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQ-LAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAK 488 (559)
T ss_dssp HHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHH-HHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC
T ss_pred HHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhcccccc
Confidence 9999999 9999999999999999999988889888 69999999999999999999999999999999863 333
Q ss_pred ----------ceeeecCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCCCC
Q 015120 344 ----------KYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE 397 (413)
Q Consensus 344 ----------~~G~d~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~ 397 (413)
++|||+.+|+++||++.|||||+.||+++|++|+|+|++|||||++|...|+++
T Consensus 489 ~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~ 552 (559)
T 3p9d_A 489 PEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPEPP 552 (559)
T ss_dssp ----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCCC
T ss_pred ccccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCccc
Confidence 789999999999999999999999999999999999999999999999877654
No 16
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1.2e-68 Score=562.15 Aligned_cols=341 Identities=17% Similarity=0.226 Sum_probs=305.5
Q ss_pred CccccC--C---h-hHHHHHHHhc------CCchhHHHHHHHHHHHhc-cC------CceeeecCCccccceeeeeceEE
Q 015120 1 MSKEVE--D---S-ELADVAAVSA------GNNYEVGNMIAEAMSKVG-RK------GVVTLEEGKSAENMLYVVEGMQF 61 (413)
Q Consensus 1 ~a~pv~--~---~-~L~~VA~ts~------~~~~~la~lv~~Ai~~vg-~~------~~I~~~~g~s~~ds~~~i~G~~~ 61 (413)
+|+|++ | + +|.+||+||. .++++|++++++|+.+++ .+ +++++ +|++++|| ++++|++|
T Consensus 143 ~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~ds-~lv~G~~~ 220 (550)
T 3p9d_G 143 LAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEES-LFINGVAF 220 (550)
T ss_dssp SEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGGC-CCCSSEEE
T ss_pred hcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccce-eEEeeEEE
Confidence 467775 3 6 8999999984 468999999999999999 44 66664 69999999 79999999
Q ss_pred ecccccCccccCcccCeeeecCeeEEEeccc-------------CCCHHHHHH-----------HHHHHHhcCCCEEEEe
Q 015120 62 DRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDLIN-----------VLEDAIRGAYPILIIA 117 (413)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~~~~-----------~le~i~~~~~~lvI~~ 117 (413)
+++|.||||.+ |+++++||+||++|++ |++++++.+ +++++.++|++|||++
T Consensus 221 dk~~~s~yf~~----~~~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~ 296 (550)
T 3p9d_G 221 KKTFSYAGFEQ----QPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSK 296 (550)
T ss_dssp CCCSSCTTCSC----SCSCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEES
T ss_pred ecccccccccc----CcccccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEC
Confidence 99999999864 6777999999999997 567777766 4678889999999999
Q ss_pred ccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEE---cCC
Q 015120 118 EDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKD 194 (413)
Q Consensus 118 ~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i---~~~ 194 (413)
++|++.++++ +++ .++.+++ +.++++|+|||++|||++++ +++++++++||+|+.|++ +++
T Consensus 297 ~~I~dla~~~--L~~----~gI~~v~-----~v~k~~lerIa~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~e 360 (550)
T 3p9d_G 297 LPIGDLATQF--FAD----RNIFCAG-----RVSADDMNRVIQAVGGSIQS-----TTSDIKPEHLGTCALFEEMQIGSE 360 (550)
T ss_dssp SCCCHHHHHT--TGG----GTCEEEE-----CCCTTHHHHHHHHTCCCCBS-----SGGGCCGGGCCCCSBCCCCCCSSS
T ss_pred CCccHHHHHH--HHH----cCCcccc-----CcCHHHHHHHHHHhCCceec-----chhhCCHHHcCCceEEEEEEeCCe
Confidence 9999988777 555 4567766 66899999999999999999 899999999999999985 688
Q ss_pred eEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhhh
Q 015120 195 TTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVE 274 (413)
Q Consensus 195 ~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~ 274 (413)
+++||+||+++ ++|||+|||+|+.+++|.||+++||||++|++++
T Consensus 361 ~~~~~~g~~~~-----------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~ 405 (550)
T 3p9d_G 361 RYNLFQGCPQA-----------------------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQ 405 (550)
T ss_dssp CCEEEBCCTTC-----------------------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCC-----------------------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHh
Confidence 99999999865 6999999999999999999999999999999999
Q ss_pred cC-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc---CCCceeeecC
Q 015120 275 EG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAA 350 (413)
Q Consensus 275 ~g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~---~~~~~G~d~~ 350 (413)
+| +|||||++|+++|.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. +++++|||+.
T Consensus 406 ~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~ 484 (550)
T 3p9d_G 406 NKLIVAGGGATEMEVSKCLRDYSKTIAGKQQ-MIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFE 484 (550)
T ss_dssp SCCEEETTTHHHHHHHHHHHHHHHTCCSTTH-HHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSS
T ss_pred cCCcccCCCHHHHHHHHHHHHHhhcCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCC
Confidence 99 9999999999999999999888899998 69999999999999999999999999999999863 4678999999
Q ss_pred CCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCCCCCC
Q 015120 351 TGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 399 (413)
Q Consensus 351 ~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~ 399 (413)
+|+++||++.|||||+.||+++|++|+|+|++|||||++|...|+++++
T Consensus 485 ~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~ 533 (550)
T 3p9d_G 485 TENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNKGSESAN 533 (550)
T ss_dssp SSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEECCCCCC---
T ss_pred CCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhhCCCccccc
Confidence 9999999999999999999999999999999999999999998866544
No 17
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-66 Score=544.19 Aligned_cols=333 Identities=20% Similarity=0.276 Sum_probs=299.8
Q ss_pred CccccC--Ch-hHHHHHHHhcCCc------hhHHHHHHHHHHHhcc---CCc-----eee--ecCCccccceeeeeceEE
Q 015120 1 MSKEVE--DS-ELADVAAVSAGNN------YEVGNMIAEAMSKVGR---KGV-----VTL--EEGKSAENMLYVVEGMQF 61 (413)
Q Consensus 1 ~a~pv~--~~-~L~~VA~ts~~~~------~~la~lv~~Ai~~vg~---~~~-----I~~--~~g~s~~ds~~~i~G~~~ 61 (413)
+|+|++ |+ +|.+||+||++.+ ++|++++++|+.+++. +|. |++ ..|+++.|+ ++++|++|
T Consensus 130 ~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~ 208 (518)
T 3iyg_D 130 MSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVL 208 (518)
T ss_pred heeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEE
Confidence 467888 66 9999999998865 8999999999999985 443 554 368898888 79999999
Q ss_pred ecccccCccccCcccCeeeecCeeEEEeccc-------------CCCHHH-----------HHHHHHHHHhcCCCEEEE-
Q 015120 62 DRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARD-----------LINVLEDAIRGAYPILII- 116 (413)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~-----------~~~~le~i~~~~~~lvI~- 116 (413)
+++|.| . ||+.++||+|++++++ |+++++ +.++++++.+.|+||||+
T Consensus 209 dk~~~~-~-------mp~~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~ 280 (518)
T 3iyg_D 209 TQKVAN-S-------GITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQ 280 (518)
T ss_pred eccccc-C-------CCccccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999988 3 6778999999999996 355654 566788999999999999
Q ss_pred ----eccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEE-
Q 015120 117 ----AEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL- 191 (413)
Q Consensus 117 ----~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i- 191 (413)
+++|+++++++|.. .+|+||++| ++.+|+|||++|||++++ +++++++++||+|+.|++
T Consensus 281 k~i~~~~I~~~Al~~L~~------~~I~av~~~-----~~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~ 344 (518)
T 3iyg_D 281 KSILRDALSDLALHFLNK------MKIMVVKDI-----EREDIEFICKTIGTKPVA-----HVDQFTADMLGSAELAEEV 344 (518)
T ss_pred ccccccCcCHHHHHHHHH------cCcEEEecC-----CHHHHHHHHHHhCCEEec-----ccccCCHHHCCcCcEEEEE
Confidence 89999999999764 468999988 567899999999999999 899999999999999985
Q ss_pred --cC-CeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHH
Q 015120 192 --TK-DTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNA 268 (413)
Q Consensus 192 --~~-~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a 268 (413)
++ ++++||++|++ ++++|||+|||+|+++++|+||+++||||+
T Consensus 345 ~~g~~~~~~~~~g~~~----------------------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~ 390 (518)
T 3iyg_D 345 SLNGSGKLIKITGCAS----------------------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCV 390 (518)
T ss_pred EeCCCceEEEEECCCC----------------------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 45 68899999875 147999999999999999999999999999
Q ss_pred HHHhhhcC-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc---CCCc
Q 015120 269 TKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHK 344 (413)
Q Consensus 269 ~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~---~~~~ 344 (413)
+|+++++| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.+
T Consensus 391 ~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~ 469 (518)
T 3iyg_D 391 IRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMES-YCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT 469 (518)
T ss_pred HHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCc
Confidence 99999999 9999999999999999999888889888 69999999999999999999999999999999872 5678
Q ss_pred eeeecCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhcc
Q 015120 345 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI 393 (413)
Q Consensus 345 ~G~d~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~ 393 (413)
+|||+.+|+++||++.|||||+.||+++|++|+|+|++|||||+||+++
T Consensus 470 ~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 470 TGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR 518 (518)
T ss_pred eeEeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceEecC
Confidence 9999999999999999999999999999999999999999999999763
No 18
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=4.1e-68 Score=555.89 Aligned_cols=337 Identities=18% Similarity=0.240 Sum_probs=302.7
Q ss_pred CccccC--Ch-hHHHHHHHhcC------CchhHHHHHHHHHHHhcc--CCcee-------eecCCccccceeeeeceEEe
Q 015120 1 MSKEVE--DS-ELADVAAVSAG------NNYEVGNMIAEAMSKVGR--KGVVT-------LEEGKSAENMLYVVEGMQFD 62 (413)
Q Consensus 1 ~a~pv~--~~-~L~~VA~ts~~------~~~~la~lv~~Ai~~vg~--~~~I~-------~~~g~s~~ds~~~i~G~~~~ 62 (413)
+|+|++ |+ .|.+||+||++ ++++|++|+++|+.+++. +|.|. +..|++++|+ ++++|++|+
T Consensus 138 ~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~d 216 (528)
T 3p9d_D 138 MCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLT 216 (528)
T ss_dssp TCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCC
T ss_pred hhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEe
Confidence 578888 67 99999999976 379999999999999986 34322 2359999998 799999999
Q ss_pred cccccCccccCcccCeeeecCeeEEEecccCC-------------CHHH-----------HHHHHHHHHhcCCCEEEEec
Q 015120 63 RGYISPYFVTDSEKMAVEYENCKLLLVDKKIT-------------NARD-----------LINVLEDAIRGAYPILIIAE 118 (413)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~i~-------------~~~~-----------~~~~le~i~~~~~~lvI~~~ 118 (413)
++|.||+| |+++++||+|+++++++. ++++ +.++++++.+.|+||||+++
T Consensus 217 k~~~~~~~------m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~ 290 (528)
T 3p9d_D 217 QTAIKSAG------GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQK 290 (528)
T ss_dssp CCCCCSSS------CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESS
T ss_pred ecccCccc------CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99999987 889999999999999754 5554 56779999999999999999
Q ss_pred cC-----chHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEE--
Q 015120 119 DI-----EQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL-- 191 (413)
Q Consensus 119 ~i-----~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i-- 191 (413)
+| +++++++|. + .+|+||+ +.++++|+|||++|||++++ +++++++++||+|+.|++
T Consensus 291 ~I~~~a~~~~al~~L~--~----~~I~av~-----~~~k~~le~ia~~tGa~ii~-----~~~~l~~~~LG~a~~v~~~~ 354 (528)
T 3p9d_D 291 SILRDAVNDLALHFLS--K----LNIMVVK-----DIEREEIEFLSKGLGCKPIA-----DIELFTEDRLDSADLVEEID 354 (528)
T ss_dssp CSCTTSCSCHHHHHHT--T----TSCCEEE-----CCCTHHHHHHHHHHTCCCCS-----CSTTCCSSSEEEESCEECCE
T ss_pred CcccccCCHHHHHHHH--H----cCcEEEE-----eCCHHHHHHHHHHHCCEEec-----ccccCCHHHCCcccEEEEEE
Confidence 99 999999975 3 4589998 45899999999999999999 889999999999999984
Q ss_pred -cCCeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHH
Q 015120 192 -TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATK 270 (413)
Q Consensus 192 -~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k 270 (413)
++++++||++|.... .+++|||+|||+|+.+++|.||+++||||++|
T Consensus 355 ig~~~~~~i~g~~~~~--------------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r 402 (528)
T 3p9d_D 355 SDGSKIVRVTGIRNNN--------------------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIR 402 (528)
T ss_dssp ETTEECCBCTTBCCGG--------------------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHH
T ss_pred ECCEEEEEEEcccccC--------------------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHH
Confidence 577899999887310 15799999999999999999999999999999
Q ss_pred HhhhcC-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc---CCCcee
Q 015120 271 AAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYG 346 (413)
Q Consensus 271 ~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~---~~~~~G 346 (413)
+++++| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.++|
T Consensus 403 ~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G 481 (528)
T 3p9d_D 403 CLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQA-FIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDG 481 (528)
T ss_dssp HHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHH-TTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCC
T ss_pred HHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccc
Confidence 999999 9999999999999999999887888888 69999999999999999999999999999999874 457899
Q ss_pred eecCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhcc
Q 015120 347 YNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI 393 (413)
Q Consensus 347 ~d~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~ 393 (413)
||+.+|+++||++.|||||+.||+++|+.|+|+|++|||||+||+++
T Consensus 482 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 482 ISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp CCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCCBCC
T ss_pred eecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhHheecC
Confidence 99999999999999999999999999999999999999999998763
No 19
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.1e-66 Score=540.80 Aligned_cols=332 Identities=19% Similarity=0.256 Sum_probs=298.5
Q ss_pred CccccC----Ch-hHHHHHHHhcCC------chhHHHHHHHHHHHhccC-------Ccee--eecCCccccceeeeeceE
Q 015120 1 MSKEVE----DS-ELADVAAVSAGN------NYEVGNMIAEAMSKVGRK-------GVVT--LEEGKSAENMLYVVEGMQ 60 (413)
Q Consensus 1 ~a~pv~----~~-~L~~VA~ts~~~------~~~la~lv~~Ai~~vg~~-------~~I~--~~~g~s~~ds~~~i~G~~ 60 (413)
+|+|++ |+ +|.+||+||++. .+.|++++++|+..+... +.|+ +..|+++.|+ ++++|++
T Consensus 129 ~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~ 207 (515)
T 3iyg_E 129 ISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVI 207 (515)
T ss_pred hceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEE
Confidence 466764 35 899999999763 468999999999988642 2233 3579999998 7999999
Q ss_pred EecccccCccccCcccCeeeecCeeEEEeccc-------------CCCHHHH-----------HHHHHHHHhcCCCEEEE
Q 015120 61 FDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDL-----------INVLEDAIRGAYPILII 116 (413)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~~-----------~~~le~i~~~~~~lvI~ 116 (413)
|+++|.||+ |++.++||+|++++++ |++++++ .++++++.+.|+||||+
T Consensus 208 ~dk~~~~~~-------m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~ 280 (515)
T 3iyg_E 208 VDKDFSHPQ-------MPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVC 280 (515)
T ss_pred Eeccccccc-------ccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999998 5777899999998885 5677887 55788999999999999
Q ss_pred eccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEE-----
Q 015120 117 AEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL----- 191 (413)
Q Consensus 117 ~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i----- 191 (413)
+++|+++++++|+.|+ +++++++ ++++|+|||++|||++++ +++++++++||+|+.|++
T Consensus 281 ~~~I~~~al~~L~~~~------I~~v~~v-----~k~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~ 344 (515)
T 3iyg_E 281 QWGFDDEANHLLLQND------LPAVRWV-----GGPEIELIAIATGGRIVP-----RFSELTAEKLGFAGLVKEISFGT 344 (515)
T ss_pred eCCCCHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEec-----ccccCCHHHCCcceEEEEEEecc
Confidence 9999999999987644 6777754 799999999999999999 899999999999999996
Q ss_pred cCCeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHHH
Q 015120 192 TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKA 271 (413)
Q Consensus 192 ~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~ 271 (413)
++++++||++|+++ +.|||+|||+|+++++|+||+++||||++|+
T Consensus 345 ~k~~~~~~~g~~~~-----------------------------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~ 389 (515)
T 3iyg_E 345 TKDKMLVIEQCKNS-----------------------------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRN 389 (515)
T ss_pred ccceEEEEEcCCCC-----------------------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHH
Confidence 45899999999876 5899999999999999999999999999999
Q ss_pred hhhcC-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc----CCCcee
Q 015120 272 AVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS----DNHKYG 346 (413)
Q Consensus 272 al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~----~~~~~G 346 (413)
++++| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.++|
T Consensus 390 a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G 468 (515)
T 3iyg_E 390 LIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQ-YAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALG 468 (515)
T ss_pred HHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHH-HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeee
Confidence 99999 9999999999999999999988889998 69999999999999999999999999999999862 457899
Q ss_pred eecCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhc
Q 015120 347 YNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE 392 (413)
Q Consensus 347 ~d~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~ 392 (413)
||+.+|+++||++.|||||+.||+++|++|+|+|++|||||++|++
T Consensus 469 ~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 469 IDCLHKGTNDMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred EecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 9999999999999999999999999999999999999999999975
No 20
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=5.4e-68 Score=555.47 Aligned_cols=338 Identities=20% Similarity=0.299 Sum_probs=303.1
Q ss_pred CccccCC-----h-hHHHHHHHhcCC------chhHHHHHHHHHHHhccCC---ceeee--cCCccccceeeeeceEEec
Q 015120 1 MSKEVED-----S-ELADVAAVSAGN------NYEVGNMIAEAMSKVGRKG---VVTLE--EGKSAENMLYVVEGMQFDR 63 (413)
Q Consensus 1 ~a~pv~~-----~-~L~~VA~ts~~~------~~~la~lv~~Ai~~vg~~~---~I~~~--~g~s~~ds~~~i~G~~~~~ 63 (413)
+|+|+++ + +|.+||+||++. +++|++|+++|+.+++.++ +|+++ .|+++.|+ ++++|++|++
T Consensus 138 ~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk 216 (527)
T 3p9d_B 138 AAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAK 216 (527)
T ss_dssp TCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSC
T ss_pred hCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEec
Confidence 4678874 6 899999999875 7899999999999999886 66654 69999998 7999999999
Q ss_pred ccccCccccCcccCeeeecCeeEEEeccc--------------CCCHHHH-----------HHHHHHHHhcCCCEEEEec
Q 015120 64 GYISPYFVTDSEKMAVEYENCKLLLVDKK--------------ITNARDL-----------INVLEDAIRGAYPILIIAE 118 (413)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~Ili~d~~--------------i~~~~~~-----------~~~le~i~~~~~~lvI~~~ 118 (413)
+|.||+ |++++||+|++++++ |++++++ .+.++++.++|+||||+++
T Consensus 217 ~~~~~~--------p~~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~ 288 (527)
T 3p9d_B 217 KFGNNQ--------PKRIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQ 288 (527)
T ss_dssp CCSSSC--------CSCCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSC
T ss_pred ccCCCC--------CeeeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECC
Confidence 999985 456899999999875 4567776 4568889999999999999
Q ss_pred cCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEE---EcCCe
Q 015120 119 DIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDT 195 (413)
Q Consensus 119 ~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~---i~~~~ 195 (413)
+|+++++++|.. .++++|++| ++.+|+|||++|||++++ +++++++++||+|+.|+ +++++
T Consensus 289 ~I~~~al~~L~~------~~i~av~~~-----~~~dle~ia~~tGa~iv~-----~~~~~~~~~LG~a~~v~~~~ig~~~ 352 (527)
T 3p9d_B 289 LIYDYPEQLFTD------LGINSIEHA-----DFEGVERLALVTGGEVVS-----TFDEPSKCKLGECDVIEEIMLGEQP 352 (527)
T ss_dssp CCTTTHHHHHHH------TCBCCCCCC-----HHHHHHHHHHHTCCCCCS-----TTSCCTTSCEECSBCCBCCCSSSCC
T ss_pred CCCHHHHHHHHH------CCCEEEecC-----CHHHHHHHHHHhCCEEec-----chhhCCHHHCCCCcEEEEEEecceE
Confidence 999999999764 358999966 678899999999999999 89999999999999998 57899
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhhhc
Q 015120 196 TTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEE 275 (413)
Q Consensus 196 ~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~ 275 (413)
++||.||+++ ++|||+|||+|+.+++|+||+++||||++|+++++
T Consensus 353 ~~~~~g~~~~-----------------------------------~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~ 397 (527)
T 3p9d_B 353 FLKFSGCKAG-----------------------------------EACTIVLRGATDQTLDEAERSLHDALSVLSQTTKE 397 (527)
T ss_dssp BCCBCSSCCS-----------------------------------CCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCC-----------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998864 79999999999999999999999999999999999
Q ss_pred C-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc---CCCceeeecCC
Q 015120 276 G-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAAT 351 (413)
Q Consensus 276 g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~---~~~~~G~d~~~ 351 (413)
| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.++|||+.+
T Consensus 398 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~ 476 (527)
T 3p9d_B 398 TRTVLGGGCAEMVMSKAVDTEAQNIDGKKS-LAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNN 476 (527)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHHHCSHHH-HHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSS
T ss_pred CCcccCCcHHHHHHHHHHHHHHhccCcHHH-HHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCC
Confidence 9 9999999999999999999887889888 69999999999999999999999999999999864 56789999999
Q ss_pred CcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCCCCCC
Q 015120 352 GNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 399 (413)
Q Consensus 352 g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~ 399 (413)
|+++||++.|||||+.||+++|++|+|+|++|||||++|...|+++.+
T Consensus 477 g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 524 (527)
T 3p9d_B 477 GTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRARPRTANR 524 (527)
T ss_dssp TTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEEEC------
T ss_pred CCCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcccCC
Confidence 999999999999999999999999999999999999999998765443
No 21
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.1e-66 Score=539.61 Aligned_cols=333 Identities=20% Similarity=0.274 Sum_probs=300.1
Q ss_pred CccccC--Ch-hHHHHHHHhcC------CchhHHHHHHHHHHHhccC--C--------c--eeeecCCccccceeeeece
Q 015120 1 MSKEVE--DS-ELADVAAVSAG------NNYEVGNMIAEAMSKVGRK--G--------V--VTLEEGKSAENMLYVVEGM 59 (413)
Q Consensus 1 ~a~pv~--~~-~L~~VA~ts~~------~~~~la~lv~~Ai~~vg~~--~--------~--I~~~~g~s~~ds~~~i~G~ 59 (413)
+|.|++ |+ .|.+||+||.+ +.+.+++++++|+..+..+ + + |++.+|++++|+ ++++|+
T Consensus 128 ~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~ 206 (515)
T 3iyg_G 128 ISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGV 206 (515)
T ss_pred hhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeE
Confidence 467877 35 89999999965 3457788999999988621 2 1 344589999998 799999
Q ss_pred EEecccccCccccCcccCeeeecCeeEEEecc-------------cCCCHHHHHHHHH-----------HHHhcCCCEEE
Q 015120 60 QFDRGYISPYFVTDSEKMAVEYENCKLLLVDK-------------KITNARDLINVLE-----------DAIRGAYPILI 115 (413)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~-------------~i~~~~~~~~~le-----------~i~~~~~~lvI 115 (413)
+|+++|.||. |+++++||||+++++ .|++++++.++++ ++.+.|++|||
T Consensus 207 v~dk~~~~~~-------m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi 279 (515)
T 3iyg_G 207 MINKDVTHPR-------MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVI 279 (515)
T ss_pred EEeCCCCCCC-------CcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 9999999986 789999999999999 5789999999877 88899999999
Q ss_pred EeccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCccccc-ceEEEE---
Q 015120 116 IAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVVL--- 191 (413)
Q Consensus 116 ~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~-~~~v~i--- 191 (413)
++++|++.++++|. + .+|+||+ +.++++|+|||++|||++++ +++++++++||+ |+.|++
T Consensus 280 ~~~~I~~~al~~L~--~----~~I~av~-----~~~k~~leria~~tGa~ii~-----~l~~l~~~~LG~~a~~v~~~~~ 343 (515)
T 3iyg_G 280 TEKGISDLAQHYLM--R----ANITAIR-----RVRKTDNNRIARACGARIVS-----RPEELREEDVGTGAGLLEIKKI 343 (515)
T ss_pred ECCccCHHHHHHHH--H----CCceeec-----cCCHHHHHHHHHHhCCeeec-----cccccChhhcCCcccEEEEEEE
Confidence 99999999999964 4 5678876 67999999999999999999 899999999999 999985
Q ss_pred cCCeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHHH
Q 015120 192 TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKA 271 (413)
Q Consensus 192 ~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~ 271 (413)
++++++||+||+++ +.|||+|||+|+++++|.||+++||||++|+
T Consensus 344 g~~~~~~i~g~~~~-----------------------------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~ 388 (515)
T 3iyg_G 344 GDEYFTFITECKDP-----------------------------------KACTILLRGASKEILSEVERNLQDAMQVCRN 388 (515)
T ss_pred CCceEEEEeCCCCC-----------------------------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 56799999999876 5899999999999999999999999999999
Q ss_pred hhhcC-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc----CCCcee
Q 015120 272 AVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS----DNHKYG 346 (413)
Q Consensus 272 al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~----~~~~~G 346 (413)
+++++ +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.++|
T Consensus 389 ~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq-~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G 467 (515)
T 3iyg_G 389 VLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQ-WPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWG 467 (515)
T ss_pred HhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcee
Confidence 99776 9999999999999999999988899998 69999999999999999999999999999999863 245789
Q ss_pred eecCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhcc
Q 015120 347 YNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI 393 (413)
Q Consensus 347 ~d~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~ 393 (413)
||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...
T Consensus 468 ~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 468 VNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred eeCCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 99999999999999999999999999999999999999999999753
No 22
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5e-66 Score=538.83 Aligned_cols=331 Identities=20% Similarity=0.283 Sum_probs=297.7
Q ss_pred ccccCCh-hHHHHHHHhcCC-----chhHHHHHHHHHHHhccC-Ccee-------eecCCccccceeeeeceEEeccccc
Q 015120 2 SKEVEDS-ELADVAAVSAGN-----NYEVGNMIAEAMSKVGRK-GVVT-------LEEGKSAENMLYVVEGMQFDRGYIS 67 (413)
Q Consensus 2 a~pv~~~-~L~~VA~ts~~~-----~~~la~lv~~Ai~~vg~~-~~I~-------~~~g~s~~ds~~~i~G~~~~~~~~~ 67 (413)
++|++|+ +|.+||+||++. +++|++++++|+.+++++ +.|. +..|+++.|+ ++++|++|+++|.|
T Consensus 135 ~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~ 213 (512)
T 3iyg_Q 135 AKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG 213 (512)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC
Confidence 4567778 999999999875 789999999999999875 4332 2459999888 79999999999866
Q ss_pred CccccCcccCeeeecCeeEEEeccc-------------CCCHHHHHHH-------HH----HHHhcCCCEEEEeccCchH
Q 015120 68 PYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDLINV-------LE----DAIRGAYPILIIAEDIEQE 123 (413)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~~~~~-------le----~i~~~~~~lvI~~~~i~~~ 123 (413)
|++.++||+|++++++ |++++++.++ ++ ++.++|+||||++++|++.
T Consensus 214 ---------~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~l 284 (512)
T 3iyg_Q 214 ---------DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADM 284 (512)
T ss_pred ---------CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHH
Confidence 5677899999999985 6778898887 55 8889999999999999999
Q ss_pred HHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEE---cCCeEEEEc
Q 015120 124 ALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVG 200 (413)
Q Consensus 124 al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~~~ 200 (413)
++++ +++ .+|+||++| ++.+|+|||++|||++++ +++++++++||+|+.|++ ++++++||+
T Consensus 285 a~~~--l~k----~~I~av~~~-----~~~dle~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~ 348 (512)
T 3iyg_Q 285 ALHY--ANK----YNIMLVRLN-----SKWDLRRLCKTVGATALP-----RLNPPVLEEMGHCDSVYLSEVGDTQVVVFK 348 (512)
T ss_pred HHHH--HHH----CCeEEEEeC-----CHHHHHHHHHHhCCEEec-----ccccCCHHHCCcccEEEEEEeCCeEEEEEE
Confidence 8887 455 689999977 567899999999999999 899999999999999985 467899999
Q ss_pred CCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhhhcC-ccc
Q 015120 201 DGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVV 279 (413)
Q Consensus 201 ~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vVp 279 (413)
+|+. ++++|||+|||+|+++++|.||+++||||++|+++++| +||
T Consensus 349 ~~~~----------------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVp 394 (512)
T 3iyg_Q 349 HEKE----------------------------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVP 394 (512)
T ss_pred cccC----------------------------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEec
Confidence 8763 25799999999999999999999999999999999999 999
Q ss_pred cCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc---CCCceeeecCCC--cc
Q 015120 280 GGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATG--NY 354 (413)
Q Consensus 280 GGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~---~~~~~G~d~~~g--~i 354 (413)
|||++|+++|.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.++|||+.+| ++
T Consensus 395 GGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~ 473 (512)
T 3iyg_Q 395 GGGATEIELAKQITSYGETCPGLEQ-YAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAV 473 (512)
T ss_pred CCcHHHHHHHHHHHHHhccCCcHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcc
Confidence 9999999999999999988889998 69999999999999999999999999999999863 567899999965 99
Q ss_pred cccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhcc
Q 015120 355 EDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI 393 (413)
Q Consensus 355 ~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~ 393 (413)
+||++.|||||+.||+++|++|+|+|++|||||++|+++
T Consensus 474 ~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~k 512 (512)
T 3iyg_Q 474 KDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMAK 512 (512)
T ss_pred cchHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHheecC
Confidence 999999999999999999999999999999999999753
No 23
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=9.2e-66 Score=541.38 Aligned_cols=341 Identities=19% Similarity=0.251 Sum_probs=298.5
Q ss_pred CccccCC-------hhHHHHHHHhcC------CchhHHHHHHHHHHHhccC-------Cce--eeecCCccccceeeeec
Q 015120 1 MSKEVED-------SELADVAAVSAG------NNYEVGNMIAEAMSKVGRK-------GVV--TLEEGKSAENMLYVVEG 58 (413)
Q Consensus 1 ~a~pv~~-------~~L~~VA~ts~~------~~~~la~lv~~Ai~~vg~~-------~~I--~~~~g~s~~ds~~~i~G 58 (413)
+|+|+++ ..|.+||+||++ +.+.|++++++|+..+... +.| .+..|++++|+ ++++|
T Consensus 164 ~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveG 242 (562)
T 3p9d_E 164 TCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLING 242 (562)
T ss_dssp TTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESS
T ss_pred hccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeee
Confidence 4567753 269999999976 3578999999999988652 233 33579999999 79999
Q ss_pred eEEecccccCccccCcccCeeeecCeeEEEeccc-------------CCCHHH-----------HHHHHHHHHhcCCCEE
Q 015120 59 MQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARD-----------LINVLEDAIRGAYPIL 114 (413)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~-----------~~~~le~i~~~~~~lv 114 (413)
++|+++|.||+|.+..+ .+..++||+|++++++ |+++++ +.++++++.+.|+|||
T Consensus 243 mv~dk~~~sp~m~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vv 321 (562)
T 3p9d_E 243 VILDKDFSHPQMPKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVV 321 (562)
T ss_dssp EEESSCCCTTSCCC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCC
T ss_pred EEEecCCCCCCcCcccc-cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 99999999998643321 1112389999999985 556666 5677999999999999
Q ss_pred EEeccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEE---
Q 015120 115 IIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL--- 191 (413)
Q Consensus 115 I~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i--- 191 (413)
||+++|+++++++|..|+ +++|+++ ++++|+|||++|||++++ +++++++++||+|+.|++
T Consensus 322 I~~~~I~~~Al~~L~~~~------I~~v~~v-----~k~~le~ia~~TGa~iis-----~l~~l~~~~LG~a~~v~~~~i 385 (562)
T 3p9d_E 322 ICQWGFDDEANHLLLQND------LPAVRWV-----GGQELEHIAISTNGRIVP-----RFQDLSKDKLGTCSRIYEQEF 385 (562)
T ss_dssp EECSSCCSHHHHHHHTTT------CCCEECC-----CTTTHHHHHHHHCCCEEE-----SSSCCCTTSCEECSCEEEECC
T ss_pred EEeCCCCHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEe
Confidence 999999999999986544 5677755 789999999999999999 899999999999999997
Q ss_pred --cCCeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHH
Q 015120 192 --TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNAT 269 (413)
Q Consensus 192 --~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~ 269 (413)
++++++||++|+++ +.|||+|||+|+.+++|.||+++||||++
T Consensus 386 g~~~~~~~~i~g~~~~-----------------------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~ 430 (562)
T 3p9d_E 386 GTTKDRMLIIEQSKET-----------------------------------KTVTCFVRGSNKMIVDEAERALHDSLCVV 430 (562)
T ss_dssp SSSSCCEEEECCCSCC-----------------------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHH
T ss_pred ccCCceEEEEecCCCC-----------------------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 36899999999875 68999999999999999999999999999
Q ss_pred HHhhhcC-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc----CCCc
Q 015120 270 KAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS----DNHK 344 (413)
Q Consensus 270 k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~----~~~~ 344 (413)
|+++++| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.+
T Consensus 431 r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~ 509 (562)
T 3p9d_E 431 RNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQ-YAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISN 509 (562)
T ss_dssp HHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHH-HHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSS
T ss_pred HHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCc
Confidence 9999999 9999999999999999999988889998 69999999999999999999999999999999862 4578
Q ss_pred eeeecCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCC
Q 015120 345 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 395 (413)
Q Consensus 345 ~G~d~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~ 395 (413)
+|||+.+|+++||++.|||||+.||+++|++|+|+|++|||||++|.+.+.
T Consensus 510 ~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 510 IGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp BCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC-
T ss_pred eeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999999999999999999999999999999988654
No 24
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.9e-65 Score=532.11 Aligned_cols=331 Identities=21% Similarity=0.317 Sum_probs=291.6
Q ss_pred CccccC-Ch-hHHHHHHHhcCC------chhHHHHHHHHHHHhccCC------c--eeeecCCccccceeeeeceEEecc
Q 015120 1 MSKEVE-DS-ELADVAAVSAGN------NYEVGNMIAEAMSKVGRKG------V--VTLEEGKSAENMLYVVEGMQFDRG 64 (413)
Q Consensus 1 ~a~pv~-~~-~L~~VA~ts~~~------~~~la~lv~~Ai~~vg~~~------~--I~~~~g~s~~ds~~~i~G~~~~~~ 64 (413)
+|+|++ ++ .|.+||+||.+. .+.|++++++|+..+...+ . |.+..|++..|+ ++++|++|+++
T Consensus 129 ~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~ 207 (517)
T 3iyg_Z 129 VKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHG 207 (517)
T ss_pred hCcCCCCCHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEecc
Confidence 467887 66 999999999763 4789999999999886432 1 344689999998 79999999999
Q ss_pred cccCccccCcccCeeeecCeeEEEecccC-------------CCHHHHHHH-----------HHHHHhcC--------CC
Q 015120 65 YISPYFVTDSEKMAVEYENCKLLLVDKKI-------------TNARDLINV-----------LEDAIRGA--------YP 112 (413)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~Ili~d~~i-------------~~~~~~~~~-----------le~i~~~~--------~~ 112 (413)
|.||+ |+++++||+||++++++ ++++++.++ ++++...+ +|
T Consensus 208 ~~~p~-------m~~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~ 280 (517)
T 3iyg_Z 208 ARHPD-------MKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKG 280 (517)
T ss_pred CCCCC-------ccccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCc
Confidence 99997 78999999999999864 566666553 44554444 34
Q ss_pred E-EEEeccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcc-cccceEE-
Q 015120 113 I-LIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEV-LGNASKV- 189 (413)
Q Consensus 113 l-vI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~-lG~~~~v- 189 (413)
+ ||++++|+++++++|. + .+|++|+ +.++++|+|||++|||++++ +++++++++ ||+|+ |
T Consensus 281 lvIi~~~~I~d~al~~L~--~----~gI~~v~-----~v~~~~leria~~tGa~iv~-----~l~~l~~~~~LG~a~-v~ 343 (517)
T 3iyg_Z 281 FVVINQKGIDPFSLDALA--K----EGIIALR-----RAKRRNMERLTLACGGIALN-----SLDDLNPDCLLGHAG-VY 343 (517)
T ss_pred eEEEecccCCHHHHHHHH--H----CCCEEEE-----ecCHHHHHHHHHHhCCEEec-----chhhCcccccCCcce-EE
Confidence 4 6667999999999975 3 3578887 44789999999999999999 999999999 99999 9
Q ss_pred --EEcCCeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHH
Q 015120 190 --VLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALN 267 (413)
Q Consensus 190 --~i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~ 267 (413)
.+++++++||++|+++ +.|||+|||+|+++++|.||+++||||
T Consensus 344 e~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~t~~~l~E~kr~l~DAl~ 388 (517)
T 3iyg_Z 344 EYTLGEEKFTFIEKCNNP-----------------------------------RSVTLLIKGPNKHTLTQIKDAIRDGLR 388 (517)
T ss_pred EEEEcCceEEEEeCCCCc-----------------------------------hhheeeecCCcHHHHHHHHHHHHHHHH
Confidence 4689999999999876 478999999999999999999999999
Q ss_pred HHHHhhhcC-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc---CCC
Q 015120 268 ATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNH 343 (413)
Q Consensus 268 a~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~---~~~ 343 (413)
++|+++++| +|||||++|+++|.+|++++.++++.+| +++++|++||+.+|++||+|||+|+.+++.+|++. ++.
T Consensus 389 ~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~ 467 (517)
T 3iyg_Z 389 AVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQ-LGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQ 467 (517)
T ss_pred HHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 999999999 9999999999999999999988888888 69999999999999999999999999999999863 467
Q ss_pred ceeeecCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhc
Q 015120 344 KYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE 392 (413)
Q Consensus 344 ~~G~d~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~ 392 (413)
++|||+.+|+++||++.|||||+.||+++|++|+|+|++|||||++|.+
T Consensus 468 ~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 468 LVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRA 516 (517)
T ss_pred cEEEeCCCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 8999999999999999999999999999999999999999999999975
No 25
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=5.9e-67 Score=551.07 Aligned_cols=336 Identities=20% Similarity=0.258 Sum_probs=286.2
Q ss_pred CCh-hHHHHHHHhc-----CCchhHHHHHHHHHHHhccC-----C-------ceee--ecCCccccceeeeeceEEeccc
Q 015120 6 EDS-ELADVAAVSA-----GNNYEVGNMIAEAMSKVGRK-----G-------VVTL--EEGKSAENMLYVVEGMQFDRGY 65 (413)
Q Consensus 6 ~~~-~L~~VA~ts~-----~~~~~la~lv~~Ai~~vg~~-----~-------~I~~--~~g~s~~ds~~~i~G~~~~~~~ 65 (413)
+++ .|.+||+||. +++++|++|+++|+.+++.+ + .|++ ..|++++|| ++++|++|+++|
T Consensus 154 ~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~ 232 (568)
T 3p9d_H 154 NDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGMVFNREP 232 (568)
T ss_dssp CTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSCCBSSCB
T ss_pred CCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccEEEeecc
Confidence 466 8999999995 34699999999999999863 3 4544 469999999 799999999987
Q ss_pred ccCccccCcccCeeeec---CeeEEEeccc-------------CCCHHHHHH-----------HHHHHHhcCCCEEEEec
Q 015120 66 ISPYFVTDSEKMAVEYE---NCKLLLVDKK-------------ITNARDLIN-----------VLEDAIRGAYPILIIAE 118 (413)
Q Consensus 66 ~~~~~~~~~~~~~~~~~---~~~Ili~d~~-------------i~~~~~~~~-----------~le~i~~~~~~lvI~~~ 118 (413)
. +|+++++ ||+|++++++ |++++++.+ +++++.+.|+||||+++
T Consensus 233 ~---------~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~ 303 (568)
T 3p9d_H 233 E---------GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGA 303 (568)
T ss_dssp S---------SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred c---------CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECC
Confidence 4 2788899 9999999997 788888876 57789999999999999
Q ss_pred cCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEE---cCCe
Q 015120 119 DIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDT 195 (413)
Q Consensus 119 ~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i---~~~~ 195 (413)
+|++.++++|.. .+|+||++| ++.+|+|||++|||++++ +++++++++||+|+.|++ ++++
T Consensus 304 ~I~~~al~~L~~------~gI~av~~v-----~~~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~~~ 367 (568)
T 3p9d_H 304 GVGELALHYLNR------YGILVLKVP-----SKFELRRLCRVCGATPLP-----RLGAPTPEELGLVETVKTMEIGGDR 367 (568)
T ss_dssp CCCHHHHHHHHH------HTCEEECCC-----CHHHHHHHHHHHSCCCCS-----SSSCCCGGGCEECSCCCCCEETTEE
T ss_pred CcChHHHHHHHH------CCeEEEecC-----CHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEecCce
Confidence 999999999754 358999977 688999999999999999 899999999999999974 5689
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHHHHHHHHHhhh-
Q 015120 196 TTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVE- 274 (413)
Q Consensus 196 ~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~- 274 (413)
++||++|+. |++++|||+|||+|+++++|.||+++||||++|++++
T Consensus 368 ~~~~~g~~~---------------------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~ 414 (568)
T 3p9d_H 368 VTVFKQEQG---------------------------------EISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKP 414 (568)
T ss_dssp CBCCCCCSS---------------------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred EEEEecCCC---------------------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999872 2347999999999999999999999999999999999
Q ss_pred -cC-ccccCchHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc-----------C
Q 015120 275 -EG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS-----------D 341 (413)
Q Consensus 275 -~g-vVpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~-----------~ 341 (413)
++ +|||||++|+++|.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. +
T Consensus 415 ~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq-~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~ 493 (568)
T 3p9d_H 415 SGGKLLPGAGATEIELISRITKYGERTPGLLQ-LAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTD 493 (568)
T ss_dssp TCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHH-HHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCT
T ss_pred cCCeEEeCCcHHHHHHHHHHHHHhccCCcHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccC
Confidence 66 9999999999999999999988899998 69999999999999999999999999999999874 3
Q ss_pred CCceeeecCCCc---ccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCC
Q 015120 342 NHKYGYNAATGN---YEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 401 (413)
Q Consensus 342 ~~~~G~d~~~g~---i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~~~~~~ 401 (413)
+.++|||+.+|+ +.||++.|||||+.||+++|++|+|+|++|||||++|..+|...|+||
T Consensus 494 ~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~~ 556 (568)
T 3p9d_H 494 HLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAGGPRAP 556 (568)
T ss_dssp TSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC------------------
T ss_pred CCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccCCCCCC
Confidence 467899999997 999999999999999999999999999999999999999998877755
No 26
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=2.3e-65 Score=537.36 Aligned_cols=335 Identities=21% Similarity=0.282 Sum_probs=289.5
Q ss_pred ccccC----Ch-hHHHHHHHhcCC------chhHHHHHHHHHHHhccC-------Cce--eeecCCccccceeeeeceEE
Q 015120 2 SKEVE----DS-ELADVAAVSAGN------NYEVGNMIAEAMSKVGRK-------GVV--TLEEGKSAENMLYVVEGMQF 61 (413)
Q Consensus 2 a~pv~----~~-~L~~VA~ts~~~------~~~la~lv~~Ai~~vg~~-------~~I--~~~~g~s~~ds~~~i~G~~~ 61 (413)
|+|++ |+ .|.+||+||++. .+.|++++++|+..+... ..| .+..|++..|+ ++++|++|
T Consensus 137 a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~ 215 (546)
T 3p9d_F 137 KISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVL 215 (546)
T ss_dssp CCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEE
T ss_pred hccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEE
Confidence 56774 56 899999999763 478999999999988631 123 33579999999 79999999
Q ss_pred ecccccCccccCcccCeeeecCeeEEEecccC-------------CCHHHHHH-----------HHHHHHh---------
Q 015120 62 DRGYISPYFVTDSEKMAVEYENCKLLLVDKKI-------------TNARDLIN-----------VLEDAIR--------- 108 (413)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~i-------------~~~~~~~~-----------~le~i~~--------- 108 (413)
+++|.||+ |+++++||+||++++++ ++++++.+ .++++..
T Consensus 216 dk~~~~~~-------m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~ 288 (546)
T 3p9d_F 216 DHGGRHPD-------MPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMD 288 (546)
T ss_dssp SCCCCSSS-------SCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred eccccccc-------CcceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999986 88999999999999863 33333332 3445544
Q ss_pred cCCC-EEEEeccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccce
Q 015120 109 GAYP-ILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNAS 187 (413)
Q Consensus 109 ~~~~-lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~ 187 (413)
.|+| |||++++|+++++++|..| ++++|+ +.++++|+|||++|||++++ +++++++++||+|+
T Consensus 289 ~g~~~vIi~~k~I~~~Al~~L~~~------gI~~vr-----~v~~~~leria~~tGa~ii~-----~l~~l~~~~LG~a~ 352 (546)
T 3p9d_F 289 PDKGFVIINQKGIDPMSLDVFAKH------NILALR-----RAKRRNMERLQLVTGGEAQN-----SVEDLSPQILGFSG 352 (546)
T ss_dssp ----CEEEESSCCCHHHHHHHTTT------TCEEEC-----CCCHHHHHHHHHTTTBCCCC-----CCSSCSTTCCBCCC
T ss_pred cCCceEEEecCcCcHHHHHHHHHC------CCeeEe-----cCCHHHHHHHHHHhCCEEec-----chhhCCHhHCCccc
Confidence 3454 7777889999999997643 468888 45789999999999999999 89999999999999
Q ss_pred EEE---EcCCeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChhhHHHHHHHHHH
Q 015120 188 KVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVED 264 (413)
Q Consensus 188 ~v~---i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~D 264 (413)
.|+ +++++|+||+||+++ ..|||+|||+|+++++|.||+++|
T Consensus 353 ~v~~~~ig~~~~~~i~g~~~~-----------------------------------~~~tI~lrG~te~~l~E~kr~l~D 397 (546)
T 3p9d_F 353 LVYQETIGEEKFTYVTENTDP-----------------------------------KSCTILIKGSTHYALAQTKDAVRD 397 (546)
T ss_dssp CBCBCCCSSCCCEECSSCSCC-----------------------------------SCEEEECCCSCHHHHHHHHHHHHH
T ss_pred EEEEEEecCceEEEEecCCCC-----------------------------------ceEEEEECCCCHHHHHHHHHHHHH
Confidence 994 688999999999876 589999999999999999999999
Q ss_pred HHHHHHHhhhcC-ccccCchHHHHHHHHHHH---HhccCCChHHHHHHHHHHHHHhHHHHHHHHhcCCCchhhHHhhhcc
Q 015120 265 ALNATKAAVEEG-IVVGGGCTLLRLSSKVDA---IKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS 340 (413)
Q Consensus 265 Al~a~k~al~~g-vVpGGGa~e~~ls~~L~~---~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~i~~kl~~~ 340 (413)
|||++|+++++| +|||||++|+++|.+|++ ++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 398 Al~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~ 476 (546)
T 3p9d_F 398 GLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTK-TGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDE 476 (546)
T ss_dssp HHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHH-HHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHH
T ss_pred HHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 999999999999 999999999999999998 5777889888 69999999999999999999999999999999863
Q ss_pred --------CCCceeeecCCCcccccccCCccccchhHHHHHHHHHHHHHHHhchhHHhhccCCC
Q 015120 341 --------DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEP 396 (413)
Q Consensus 341 --------~~~~~G~d~~~g~i~dm~~~gI~Dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~~~ 396 (413)
++.++|||+.+|+++||++.|||||+.||+++|++|+|+|++|||||+||++.+..
T Consensus 477 h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~ 540 (546)
T 3p9d_F 477 LDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRST 540 (546)
T ss_dssp HHHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSS
T ss_pred hhhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 45689999999999999999999999999999999999999999999999887653
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.6e-49 Score=350.52 Aligned_cols=193 Identities=48% Similarity=0.801 Sum_probs=189.6
Q ss_pred eeeeeceEEecccccCccccCcccCeeeecCeeEEEecccCCCHHHHHHHHHHHHhcCCCEEEEeccCchHHHHHHHHHh
Q 015120 53 LYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNK 132 (413)
Q Consensus 53 ~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~i~~~~~~~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~ 132 (413)
+++++||.||+||+||||++++++|..+++||+||++|.+|+++++++|+||++.+.++||||++++|+.+||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEEcCCeEEEEcCCCChhhHHHHH
Q 015120 133 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRV 212 (413)
Q Consensus 133 ~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~ri 212 (413)
++|.++++|||+||||+.++..|+|||++|||+++++++|+++++++.++||+|++|.+++|.|+++.|.++++.|++|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEE
Q 015120 213 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVI 245 (413)
Q Consensus 213 ~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI 245 (413)
++|+.+|++++|+|+|++|+||||+|+|++|.|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999998864
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=1.8e-47 Score=342.30 Aligned_cols=190 Identities=56% Similarity=0.881 Sum_probs=185.6
Q ss_pred eeeceEEecccccCccccCcccCeeeecCeeEEEecccCCCHHHHHHHHHHHHhcCCCEEEEeccCchHHHHHHHHHhhc
Q 015120 55 VVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLR 134 (413)
Q Consensus 55 ~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~i~~~~~~~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~ 134 (413)
=.+|+.||+||+||||++++++|..+++||+||++|.+|+++++++|+||++.+.++||||++++|+.+||++|+.|+++
T Consensus 11 ~~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklr 90 (201)
T 3osx_A 11 GSEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMR 90 (201)
T ss_dssp -CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHH
T ss_pred CccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhcc
Confidence 34799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEEcCCeEEEEcCCCChhhHHHHHHH
Q 015120 135 GALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQ 214 (413)
Q Consensus 135 ~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~ri~~ 214 (413)
|.+++||||+||||+.++..|+|||++|||+++++++|+++++++.++||+|++|.+++|.|+++.|.++++.|++|+++
T Consensus 91 g~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~q 170 (201)
T 3osx_A 91 GIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQ 170 (201)
T ss_dssp TSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhchHHHHHHHHHHHHHhcCCeEE
Q 015120 215 IRTLIENAEQDYEREKLNERIAKLSGGVAV 244 (413)
Q Consensus 215 l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~t 244 (413)
|+.+|++++|+|+|++|+||||+|+|++|.
T Consensus 171 Ir~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 171 IRQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 999999999999999999999999999863
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=2.1e-36 Score=258.45 Aligned_cols=144 Identities=56% Similarity=0.922 Sum_probs=141.8
Q ss_pred ceEEecccccCccccCcccCeeeecCeeEEEecccCCCHHHHHHHHHHHHhcCCCEEEEeccCchHHHHHHHHHhhcccc
Q 015120 58 GMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGAL 137 (413)
Q Consensus 58 G~~~~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~i~~~~~~~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~ 137 (413)
||.||+||+||||+++.++|..+++||+||++|.+|+++++++|+||++.+.++||+|++++++.++|++|+.||++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEEEcCCeEEEEcC
Q 015120 138 KIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGD 201 (413)
Q Consensus 138 ~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~~~~ 201 (413)
+++|||+||||+.|+..|+|||++|||+++++++|+++++.+.++||+|++|.+++|.|++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999875
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.92 E-value=3.2e-25 Score=200.44 Aligned_cols=146 Identities=18% Similarity=0.299 Sum_probs=120.8
Q ss_pred cccceeeeeceEEecccccCccccCcccCeeeecCeeEEEeccc-------------CCCHHHHHH-----------HHH
Q 015120 49 AENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDLIN-----------VLE 104 (413)
Q Consensus 49 ~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~~~~-----------~le 104 (413)
++|| ++++|++|++.+.+|. ||++++||||++++++ |++++++.+ .++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSSTT-------SCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCCC-------CCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 3678 6999999999998874 8999999999999996 344444443 467
Q ss_pred HHHhcCCCEEEEeccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccc
Q 015120 105 DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLG 184 (413)
Q Consensus 105 ~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG 184 (413)
+|.++|++|||++++|+|.++++|. + .+|+||+ ++++++|+|||++|||++++ ++++++++.||
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~--k----~gI~~vr-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG 136 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLM--R----ANVTAIR-----RVRKTDNNRIARACGARIVS-----RPEELREDDVG 136 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHH--H----TTCEEEC-----CCCHHHHHHHHHHHCCCEES-----CGGGCCGGGSB
T ss_pred HHhhcCCcEEEECCcccHHHHHHHH--H----CCCEEEe-----cCCHHHHHHHHHHhCCeEeC-----ChhhCChhhhC
Confidence 8999999999999999999999964 4 5689988 56899999999999999999 99999999999
Q ss_pred c-ceEEE---EcCCeEEEEcCCCChhhHHHHHHHHHHHHHhhchHHHHHHHHHHHHHhcCCeEEEEecCCChh
Q 015120 185 N-ASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTET 253 (413)
Q Consensus 185 ~-~~~v~---i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~Rl~~l~g~~~tI~v~G~t~~ 253 (413)
+ |+.|+ +++++++||+||+++ +.|||+|||+|.+
T Consensus 137 ~~~~~v~~~~ig~~~~~~~~gc~~~-----------------------------------~~~TIllRG~~~~ 174 (178)
T 1gml_A 137 TGAGLLEIKKIGDEYFTFITDCKDP-----------------------------------KACTILLRGASHH 174 (178)
T ss_dssp CCEEEEEEEEETTEEEEEEEEESST-----------------------------------TSCEEEEEC----
T ss_pred CcccEEEEEEECCeEEEEEECCCCC-----------------------------------CEEEEEEECCCcc
Confidence 9 99998 478899999999875 6999999999864
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.86 E-value=2.7e-21 Score=171.43 Aligned_cols=127 Identities=23% Similarity=0.361 Sum_probs=110.6
Q ss_pred eeceEEecccccCccccCcccCeeeecCeeEEEeccc-------------CCCHHHHHH-----------HHHHHHhcCC
Q 015120 56 VEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDLIN-----------VLEDAIRGAY 111 (413)
Q Consensus 56 i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Ili~d~~-------------i~~~~~~~~-----------~le~i~~~~~ 111 (413)
++|++|++++.+|. ||++++||+|++++++ |++++++.+ .+++|.++|+
T Consensus 1 i~Gvv~~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSK-------MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTT-------SCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCC-------CCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 57999999998875 8999999999999996 455555544 4778999999
Q ss_pred CEEEEeccCchHHHHHHHHHhhcccceeeEeeCCCCCccchhhHHHHHHHhCCeEeecCcCccccCCCCcccccceEEE-
Q 015120 112 PILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV- 190 (413)
Q Consensus 112 ~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~~~~~~~~~~~l~~~~~~~lG~~~~v~- 190 (413)
+|||++++|++.++++|. + .+|+||+ ++++++|+|||++|||++++ ++++++++.||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~--k----~gI~~v~-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLA--K----EGIYAVR-----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHH--H----TTCEEEC-----SCCHHHHHHHHHHHTCCCBS-----STTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHH--H----CCCEEEc-----cCCHHHHHHHHHHhCCeeeC-----ccccCCcccCccceEEEE
Confidence 999999999999999854 4 5689988 56899999999999999999 99999999999999998
Q ss_pred --EcCCeEEEEcCCCCh
Q 015120 191 --LTKDTTTIVGDGSTQ 205 (413)
Q Consensus 191 --i~~~~~~~~~~~~~~ 205 (413)
+++++++||++|++.
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 478999999999874
No 32
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=29.35 E-value=97 Score=26.60 Aligned_cols=52 Identities=8% Similarity=0.071 Sum_probs=32.2
Q ss_pred cCeeeecC-eeEEEecccCCCHHHHHHHHHHHHhcCCCEEEEeccC-chHHHHH
Q 015120 76 KMAVEYEN-CKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDI-EQEALAT 127 (413)
Q Consensus 76 ~~~~~~~~-~~Ili~d~~i~~~~~~~~~le~i~~~~~~lvI~~~~i-~~~al~~ 127 (413)
+.|..++. .+|+++...=.+.+.+..+++.+...++++||+.+|+ +++++..
T Consensus 17 ~~~~~~~g~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~~~~~~ 70 (190)
T 1s3l_A 17 TENLYFQGHMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSLFVIKE 70 (190)
T ss_dssp ---------CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCSTHHHHH
T ss_pred ccChhhcCCeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCHHHHHH
Confidence 35666776 7777655433566777788888777889999999997 4555554
No 33
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=29.22 E-value=1.8e+02 Score=21.82 Aligned_cols=33 Identities=12% Similarity=0.387 Sum_probs=26.4
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccCchHHHH
Q 015120 94 TNARDLINVLEDAIRGAYPILIIAEDIEQEALA 126 (413)
Q Consensus 94 ~~~~~~~~~le~i~~~~~~lvI~~~~i~~~al~ 126 (413)
++.+++..+++..++.|+|||++-.+-+..-..
T Consensus 35 tssqdirdiiksmkdngkplvvfvngasqndvn 67 (112)
T 2lnd_A 35 TSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVN 67 (112)
T ss_dssp CSHHHHHHHHHHHTTCCSCEEEEECSCCHHHHH
T ss_pred cchhhHHHHHHHHHhcCCeEEEEecCcccccHH
Confidence 578899999999999999998777777654333
No 34
>3aon_B V-type sodium ATPase subunit G; V-ATPase, coiled-coil, alpha/beta fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central AXIS; HET: MSE; 2.00A {Enterococcus hirae}
Probab=26.64 E-value=90 Score=25.00 Aligned_cols=74 Identities=14% Similarity=0.284 Sum_probs=45.3
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEeccCchHHHHHHHHHhhcccceeeEeeCCCCCccc----hhhHHHHHHHhCCeEee
Q 015120 93 ITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERK----SQYLDDIAILTGGTVIR 168 (413)
Q Consensus 93 i~~~~~~~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~~~~g~~~----~~~le~la~~tG~~~~~ 168 (413)
+++.+++...++++.+.+.-++++.+.+-+..-..+- +.+....-..|..|+-.... ....+++.++.|..++-
T Consensus 27 v~~~ee~~~~~~~l~~~digIIlIte~ia~~i~~~i~--~~~~~~~P~IveIPs~~g~~~~~~~~i~~~V~~aiG~di~~ 104 (115)
T 3aon_B 27 GTTKTEIRKTIDEMAKNEYGVIYITEQCANLVPETIE--RYKGQLTPAIILIPSHQGTLGIGLEEIQNSVEKAVGQNILS 104 (115)
T ss_dssp CCSHHHHHHHHHHHHHTTEEEEEEEHHHHTTCHHHHH--HHHTSSSCEEEEECBTTBCCSHHHHHHHHHHHHHTTCC---
T ss_pred eCCHHHHHHHHHHHHhcCceEEEEeHHHHHHhHHHHH--HHhCCCCCEEEEECCCCCCCCccHHHHHHHHHHHhCcceEe
Confidence 5788999998888776677788888877655544432 22222223445566543322 25677788899987765
No 35
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=26.09 E-value=1.2e+02 Score=22.39 Aligned_cols=51 Identities=14% Similarity=0.268 Sum_probs=30.1
Q ss_pred HHHHHhcCCCEEEEeccCchHHHHHHHH-HhhcccceeeEeeCCCCCccchhhHHHHHHHhCC
Q 015120 103 LEDAIRGAYPILIIAEDIEQEALATLVV-NKLRGALKIAALKAPGFGERKSQYLDDIAILTGG 164 (413)
Q Consensus 103 le~i~~~~~~lvI~~~~i~~~al~~L~~-n~~~~~~~i~av~~~~~g~~~~~~le~la~~tG~ 164 (413)
++.+.+....+||++.|++++....+.. -+..+ ..++ ..+ ..++|..++|-
T Consensus 20 ~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~-Ip~~--~v~--------sk~eLG~a~Gk 71 (82)
T 3v7e_A 20 VKALKRGSVKEVVVAKDADPILTSSVVSLAEDQG-ISVS--MVE--------SMKKLGKACGI 71 (82)
T ss_dssp HHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHT-CCEE--EES--------CHHHHHHHHTC
T ss_pred HHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcC-CCEE--EEC--------CHHHHHHHhCC
Confidence 4444455568999999999976665431 12122 2222 211 34678888885
No 36
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=23.17 E-value=2.6e+02 Score=23.65 Aligned_cols=86 Identities=9% Similarity=0.027 Sum_probs=57.4
Q ss_pred eecCeeEEEeccc--------------CCCHHHHHHHHHH-HHhcCCCEEEEeccCchHHHHHHHHHhhcccceeeEeeC
Q 015120 80 EYENCKLLLVDKK--------------ITNARDLINVLED-AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 144 (413)
Q Consensus 80 ~~~~~~Ili~d~~--------------i~~~~~~~~~le~-i~~~~~~lvI~~~~i~~~al~~L~~n~~~~~~~i~av~~ 144 (413)
.+++.+||+++.+ =.+.+++...++. ....|..+-+.|..-..+.++.+-.. .+....+.+.+
T Consensus 3 ~~~~m~IlvlNGPNLNlLG~REP~iYG~~Tl~di~~~l~~~a~~~g~~v~~~QSN~EGeLId~Ih~a--~~~~dgiIINp 80 (156)
T 1gtz_A 3 SLANAPIMILNGPNLNLLGQAQPEIYGSDTLADVEALCVKAAAAHGGTVDFRQSNHEGELVDWIHEA--RLNHCGIVINP 80 (156)
T ss_dssp CTTTSCEEEEECTTGGGTTTSCHHHHCSCCHHHHHHHHHHHHHTTTCCEEEEECSCHHHHHHHHHHH--HHHCSEEEEEC
T ss_pred CccCceEEEEeCCCccccCCCCCCcCCCCCHHHHHHHHHHHHHHcCCEEEEEeeCCHHHHHHHHHHh--hhcCcEEEECc
Confidence 4566779999996 2356777766654 44678999999999999988875432 23355566777
Q ss_pred CCCCccchhhHHHHHHHhC-CeEee
Q 015120 145 PGFGERKSQYLDDIAILTG-GTVIR 168 (413)
Q Consensus 145 ~~~g~~~~~~le~la~~tG-~~~~~ 168 (413)
.+|-+.+- -+.|--...+ ..++.
T Consensus 81 gA~THtSv-AlrDAl~~v~~~P~VE 104 (156)
T 1gtz_A 81 AAYSHTSV-AILDALNTCDGLPVVE 104 (156)
T ss_dssp TTHHHHCH-HHHHHHHTSTTCCEEE
T ss_pred hhhccccH-HHHHHHHhcCCCCEEE
Confidence 66666554 3445444555 66665
No 37
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=21.45 E-value=76 Score=28.05 Aligned_cols=42 Identities=7% Similarity=0.196 Sum_probs=31.7
Q ss_pred ecCeeEEEeccc-----CCCHHHHHHHHHHHHhcCCCEEEEeccCch
Q 015120 81 YENCKLLLVDKK-----ITNARDLINVLEDAIRGAYPILIIAEDIEQ 122 (413)
Q Consensus 81 ~~~~~Ili~d~~-----i~~~~~~~~~le~i~~~~~~lvI~~~~i~~ 122 (413)
+.+|+++++|.+ ..+.+++..++..+.+.|..++++.-+.+.
T Consensus 149 ~~~p~lllLDEPts~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~ 195 (214)
T 1sgw_A 149 LVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEKGIVIISSREELS 195 (214)
T ss_dssp TSCCSEEEEESTTTTSCTTTHHHHHHHHHHHHHHHSEEEEEESSCCT
T ss_pred HhCCCEEEEECCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 568999999997 345677888888776667778888776654
No 38
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=20.96 E-value=3.1e+02 Score=25.23 Aligned_cols=36 Identities=8% Similarity=0.232 Sum_probs=32.4
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccCchHHHHHHH
Q 015120 94 TNARDLINVLEDAIRGAYPILIIAEDIEQEALATLV 129 (413)
Q Consensus 94 ~~~~~~~~~le~i~~~~~~lvI~~~~i~~~al~~L~ 129 (413)
.+++++..+++.+++.++++||+...+++.....+.
T Consensus 221 ps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia 256 (291)
T 1pq4_A 221 PSAQELKQLIDTAKENNLTMVFGETQFSTKSSEAIA 256 (291)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEETTSCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHH
Confidence 578999999999999999999999999998887763
No 39
>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*
Probab=20.43 E-value=2.3e+02 Score=28.30 Aligned_cols=69 Identities=25% Similarity=0.323 Sum_probs=39.6
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHHhcC----CeEEEEecCCChhhHHHHHHHHHHHHHHHHHhhhcC-ccccCchHHHHH
Q 015120 214 QIRTLIENAEQDYEREKLNERIAKLSG----GVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRL 288 (413)
Q Consensus 214 ~l~~~l~~~~~~~~~~~l~~Rl~~l~g----~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vVpGGGa~e~~l 288 (413)
.+.+.|.+..+.-|-.-+ |.+++| ++..|.+||. .+++.-+.+-.-+..++..=-.. +|.|||..--.+
T Consensus 31 ~~~~~l~~~~~~re~~py---i~~f~~~~~~~~iViK~GGs---v~~~~l~~~a~dI~~l~~~G~~~VvVHGgG~~i~~~ 104 (460)
T 3s6g_A 31 TIVQLLSHMRDGKEIREY---LHRFSGIDQERFAVIKVGGA---VIQDDLPGLASALAFLQTVGLTPVVVHGGGPQLDAA 104 (460)
T ss_dssp HHHHHHHTSTTHHHHHHH---HHHTSSSCGGGSEEEEECHH---HHHHCHHHHHHHHHHHHHHTCCCEEEECCHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHH---HHHHhCCCCCCEEEEEEChH---HhhhHHHHHHHHHHHHHHCCCcEEEEECCChHHHHH
Confidence 455566666544433333 556777 7999999995 44443344444444444332234 889998754443
No 40
>2wh0_Q Pkcev3, protein kinase C epsilon type, NPKC-epsilon; tandem binding, phosphoprotein, signaling protein, 14-3-3, cytoplasm, acetylation; HET: SEP; 2.25A {Homo sapiens}
Probab=20.21 E-value=73 Score=18.73 Aligned_cols=19 Identities=26% Similarity=0.422 Sum_probs=15.8
Q ss_pred CCChhhHHHHHHHHHHHHH
Q 015120 249 AQTETELKEKKLRVEDALN 267 (413)
Q Consensus 249 G~t~~~l~E~~~~~~DAl~ 267 (413)
.|.++++.|.+..++.||.
T Consensus 9 spcdqeikelennirkals 27 (31)
T 2wh0_Q 9 SPCDQEIKELENNIRKALS 27 (31)
T ss_pred CchHHHHHHHHHHHHHHhc
Confidence 4678899999999988874
Done!