Query 015124
Match_columns 413
No_of_seqs 142 out of 1130
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 03:20:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015124.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015124hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0473 LeuB Isocitrate/isopro 100.0 2E-110 5E-115 821.6 31.2 336 8-407 2-347 (348)
2 PLN03065 isocitrate dehydrogen 100.0 1E-107 3E-112 835.1 39.5 408 2-412 70-480 (483)
3 PTZ00435 isocitrate dehydrogen 100.0 7E-106 1E-110 814.1 38.5 406 2-411 2-412 (413)
4 TIGR00127 nadp_idh_euk isocitr 100.0 2E-105 3E-110 810.7 38.0 400 4-410 1-408 (409)
5 PRK08299 isocitrate dehydrogen 100.0 1E-105 3E-110 810.4 36.0 390 3-409 1-402 (402)
6 PRK08997 isocitrate dehydrogen 100.0 8E-105 2E-109 792.5 35.4 328 8-405 1-334 (334)
7 PRK08194 tartrate dehydrogenas 100.0 2E-104 5E-109 794.8 34.8 337 10-406 4-350 (352)
8 PLN02329 3-isopropylmalate deh 100.0 2E-104 4E-109 803.7 33.4 353 8-412 45-408 (409)
9 PLN00118 isocitrate dehydrogen 100.0 3E-104 7E-109 795.5 34.1 332 3-405 35-372 (372)
10 PRK14025 multifunctional 3-iso 100.0 1E-103 2E-108 783.0 34.9 320 10-405 2-330 (330)
11 TIGR02089 TTC tartrate dehydro 100.0 7E-104 2E-108 791.6 33.2 338 10-405 4-352 (352)
12 PLN00103 isocitrate dehydrogen 100.0 2E-103 5E-108 795.8 36.2 391 1-409 1-410 (410)
13 PRK09222 isocitrate dehydrogen 100.0 6E-102 1E-106 797.8 35.1 335 8-408 3-344 (482)
14 PRK00772 3-isopropylmalate deh 100.0 1E-101 2E-106 777.0 34.3 341 9-406 2-356 (358)
15 PRK03437 3-isopropylmalate deh 100.0 1E-101 2E-106 773.0 33.6 330 10-405 5-344 (344)
16 PLN00123 isocitrate dehydrogen 100.0 2E-101 5E-106 771.3 35.4 319 10-405 31-359 (360)
17 TIGR00169 leuB 3-isopropylmala 100.0 2E-101 5E-106 772.6 34.4 338 11-405 1-349 (349)
18 TIGR02924 ICDH_alpha isocitrat 100.0 2E-101 4E-106 792.1 33.9 331 11-407 2-339 (473)
19 PRK06451 isocitrate dehydrogen 100.0 6E-101 1E-105 781.3 34.7 348 12-405 26-408 (412)
20 TIGR00175 mito_nad_idh isocitr 100.0 3E-100 6E-105 761.9 34.3 323 10-405 4-333 (333)
21 PRK07006 isocitrate dehydrogen 100.0 2.1E-99 5E-104 771.0 33.3 348 12-405 22-409 (409)
22 TIGR02088 LEU3_arch isopropylm 100.0 5.1E-99 1E-103 748.7 34.5 318 12-402 1-322 (322)
23 KOG0785 Isocitrate dehydrogena 100.0 3E-100 7E-105 732.9 23.6 324 10-405 36-365 (365)
24 TIGR00183 prok_nadp_idh isocit 100.0 9.7E-99 2E-103 768.9 33.4 349 12-405 29-416 (416)
25 PRK07362 isocitrate dehydrogen 100.0 7.7E-98 2E-102 757.4 32.2 348 12-404 31-473 (474)
26 PF00180 Iso_dh: Isocitrate/is 100.0 1.9E-96 4E-101 740.9 23.0 336 11-401 1-348 (348)
27 PLN00096 isocitrate dehydrogen 100.0 1.5E-92 3.2E-97 708.3 32.1 377 12-405 1-393 (393)
28 KOG0784 Isocitrate dehydrogena 100.0 4.9E-84 1.1E-88 628.2 25.9 324 9-406 42-373 (375)
29 COG0538 Icd Isocitrate dehydro 100.0 2.3E-81 5.1E-86 618.4 30.2 351 12-406 21-407 (407)
30 KOG0786 3-isopropylmalate dehy 100.0 9.5E-82 2.1E-86 592.0 22.6 341 9-409 4-362 (363)
31 KOG1526 NADP-dependent isocitr 100.0 6.8E-76 1.5E-80 563.6 27.2 407 1-411 10-419 (422)
32 PF03971 IDH: Monomeric isocit 97.3 0.0063 1.4E-07 65.0 15.2 189 178-377 450-647 (735)
33 TIGR00178 monomer_idh isocitra 96.9 0.017 3.7E-07 61.9 14.1 189 179-378 455-652 (741)
34 COG2838 Icd Monomeric isocitra 95.8 0.19 4.2E-06 53.1 13.9 180 183-371 461-646 (744)
35 PF04166 PdxA: Pyridoxal phosp 93.2 0.064 1.4E-06 53.8 2.9 134 183-339 150-296 (298)
36 PRK03371 pdxA 4-hydroxythreoni 92.1 0.11 2.5E-06 52.6 3.0 140 183-342 176-324 (326)
37 PRK00232 pdxA 4-hydroxythreoni 92.1 0.11 2.4E-06 52.8 2.9 137 183-343 177-326 (332)
38 PRK03743 pdxA 4-hydroxythreoni 91.9 0.12 2.6E-06 52.5 2.9 136 183-343 177-326 (332)
39 PRK03946 pdxA 4-hydroxythreoni 91.6 0.14 2.9E-06 51.6 2.9 136 183-343 157-303 (307)
40 PRK01909 pdxA 4-hydroxythreoni 91.5 0.14 3E-06 52.0 2.9 142 183-343 172-322 (329)
41 PRK05312 pdxA 4-hydroxythreoni 91.5 0.14 3.1E-06 52.1 2.9 142 183-343 181-331 (336)
42 PRK02746 pdxA 4-hydroxythreoni 91.4 0.15 3.2E-06 52.1 2.9 141 183-343 179-339 (345)
43 TIGR00557 pdxA 4-hydroxythreon 91.2 0.16 3.4E-06 51.5 3.0 135 183-342 169-318 (320)
44 COG1995 PdxA Pyridoxal phospha 89.5 0.36 7.8E-06 48.8 3.8 59 279-343 267-325 (332)
45 PRK03371 pdxA 4-hydroxythreoni 56.8 8.5 0.00018 39.3 2.7 22 8-29 1-24 (326)
46 COG1618 Predicted nucleotide k 49.8 2.2E+02 0.0048 26.6 11.3 101 179-286 74-176 (179)
47 KOG1671 Ubiquinol cytochrome c 48.9 9.6 0.00021 36.1 1.5 47 259-326 140-186 (210)
48 PRK05312 pdxA 4-hydroxythreoni 44.8 17 0.00037 37.2 2.7 22 8-29 2-25 (336)
49 PRK00232 pdxA 4-hydroxythreoni 44.5 18 0.0004 36.9 2.8 22 8-29 3-26 (332)
50 PRK03743 pdxA 4-hydroxythreoni 40.5 22 0.00048 36.4 2.7 20 10-29 4-25 (332)
51 PRK02746 pdxA 4-hydroxythreoni 39.5 27 0.00059 35.9 3.2 23 7-29 7-31 (345)
52 PRK07232 bifunctional malic en 38.3 1.6E+02 0.0036 33.5 9.3 98 185-289 601-714 (752)
53 PRK12861 malic enzyme; Reviewe 37.9 2.1E+02 0.0046 32.7 10.0 97 185-288 610-722 (764)
54 PRK03946 pdxA 4-hydroxythreoni 34.5 24 0.00052 35.7 1.9 19 10-28 2-22 (307)
55 COG0655 WrbA Multimeric flavod 33.3 2.1E+02 0.0046 26.6 8.0 82 11-106 5-99 (207)
56 COG1995 PdxA Pyridoxal phospha 31.8 35 0.00075 34.9 2.5 16 10-25 4-21 (332)
57 PRK12862 malic enzyme; Reviewe 31.5 3E+02 0.0065 31.5 10.0 112 182-300 606-733 (763)
58 TIGR00651 pta phosphate acetyl 30.1 2.6E+02 0.0057 28.1 8.4 102 180-288 151-269 (303)
59 COG0391 Uncharacterized conser 29.1 1.3E+02 0.0028 30.8 6.0 52 58-114 179-230 (323)
60 PRK01909 pdxA 4-hydroxythreoni 29.0 43 0.00094 34.2 2.6 20 10-29 6-27 (329)
61 TIGR00557 pdxA 4-hydroxythreon 27.2 48 0.001 33.8 2.6 20 11-30 1-22 (320)
62 PF14542 Acetyltransf_CG: GCN5 27.2 1.3E+02 0.0029 23.7 4.7 32 190-230 40-71 (78)
63 PF00582 Usp: Universal stress 26.2 72 0.0016 25.8 3.1 26 187-212 12-37 (140)
64 KOG1014 17 beta-hydroxysteroid 25.9 1.1E+02 0.0024 31.1 4.9 44 195-253 64-107 (312)
65 KOG2666 UDP-glucose/GDP-mannos 24.9 2.9E+02 0.0062 28.6 7.5 110 144-285 77-221 (481)
66 COG4992 ArgD Ornithine/acetylo 24.6 89 0.0019 32.9 4.0 76 276-367 247-323 (404)
67 COG0538 Icd Isocitrate dehydro 24.4 23 0.00049 36.9 -0.3 26 123-150 131-157 (407)
68 PRK09653 eutD phosphotransacet 22.6 4.5E+02 0.0098 26.5 8.6 106 186-300 173-295 (324)
69 cd01988 Na_H_Antiporter_C The 22.3 1.1E+02 0.0023 25.2 3.5 28 188-215 10-37 (132)
No 1
>COG0473 LeuB Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-110 Score=821.64 Aligned_cols=336 Identities=21% Similarity=0.234 Sum_probs=310.8
Q ss_pred ccccEEEECCCCccHHHHHHHHHHHhcCC---CceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchh
Q 015124 8 VANPIVEMDGDEMTRVFWKSIKDKLIFPF---LELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR 84 (413)
Q Consensus 8 m~~~I~vi~GDGIGpEv~~~~~~v~~~~~---~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~ 84 (413)
|.++|++|||||||||||+++++||.+.. ++|+|+++++|+++++++|.++|++++++|+++|++||||+++|.+..
T Consensus 2 ~~~~IavipGDGIGpEv~~~a~kVl~a~~~~~~~~e~~~~~~G~~~~~~~G~~lpeetl~~~~~~DaiL~Gavg~P~~~~ 81 (348)
T COG0473 2 KTYTIAVIPGDGIGPEVMAAALKVLEAAAEFGLDFEFEEAEVGGEAYDKHGEPLPEETLESLKKADAILFGAVGGPKWDP 81 (348)
T ss_pred CceEEEEeCCCCCCHHHHHHHHHHHHHhhhcCCceEEEEehhhHHHHHHcCCCCCHHHHHHHHhCCEEEEcccCCCCCCC
Confidence 56899999999999999999999987654 899999999999999999999999999999999999999999997763
Q ss_pred hHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCC
Q 015124 85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGK 162 (413)
Q Consensus 85 ~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~ 162 (413)
.+ +++.|++++|||+||||||+||+ +.+||+++|+. +++|+||| ||||+|+|.++
T Consensus 82 ~~-----~~~~~~ll~lRk~l~lyANlRP~------k~~~~~k~~~~------------~~~D~viVREnTeG~Y~G~~~ 138 (348)
T COG0473 82 LP-----RPERGLLLALRKELDLYANLRPA------KSLPGLKSPLV------------KGVDIVIVRENTEGLYFGEEG 138 (348)
T ss_pred CC-----CcccchHHHHHHhcCceeeeeec------ccCCCCCCccC------------CCccEEEEeeCCCccccCCCc
Confidence 32 47888899999999999999999 88999988753 58999999 79999999875
Q ss_pred CcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhC-CCCEEEEeCCCccccccHHHHHHHHHHHHhhccCcc
Q 015124 163 DEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKF 240 (413)
Q Consensus 163 ~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~ 240 (413)
+. ..+ .+++++ ++|||+++|||+|+|||+|++| ++|||+|||+|||+.+++|||++|+||++ +||
T Consensus 139 ~~--------~~~-~eva~~~~~~Tr~~~eRI~r~AFe~A~~R~~kkvTsv~KaNVl~~s~~lwrev~~eva~-~yP--- 205 (348)
T COG0473 139 RI--------LGG-GEVAIDTKVITRKGSERIARFAFELARKRGRKKVTSVHKANVLKLSDGLWREVVEEVAK-EYP--- 205 (348)
T ss_pred cc--------cCC-CeEEEEEEeccHHHHHHHHHHHHHHHHhhCCCceEEEehhhhhhhhhHHHHHHHHHHhh-cCC---
Confidence 21 112 248999 9999999999999999999999 68999999999999999999999999995 899
Q ss_pred ccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCC-CceEEEcccccccccccc
Q 015124 241 EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPD-GKTIEAEAAHGTVTRHYR 318 (413)
Q Consensus 241 ~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~-~~~a~FEp~HGSAp~~~~ 318 (413)
+|+++|+|||+++||||++|++| ||||+|||||||||+||+|+|||||+||||+|++ + ++||||+|||||
T Consensus 206 ---dv~~~~~~VD~aam~lV~~P~~FDViVt~NlFGDILSD~aa~l~GslGl~PSAnig~~~~-~~lfEPvHGSAP---- 277 (348)
T COG0473 206 ---DVELDHMYVDAAAMQLVRNPEQFDVIVTSNLFGDILSDEAAALTGSLGLAPSANLGDERG-PALFEPVHGSAP---- 277 (348)
T ss_pred ---CcchhHHhHHHHHHHHhhCccccCEEEEccchhHHHHhHHHHhcCccccCccCccCCCCC-CceeecCCCCcc----
Confidence 99999999999999999999999 9999999999999999999999999999999984 5 799999999999
Q ss_pred ccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhc-CCCCcchhhhhcCCcCCCccccCHHHH
Q 015124 319 VHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVES-GKMTKDLALIIHGSKMTREHYLNTEEF 397 (413)
Q Consensus 319 ~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~-G~~T~Dlg~~~~G~~~~~~~~~sT~e~ 397 (413)
||||||| |||+|+|||++|||+|+|. .++|++|++||.+++++ |++|+||| | ..+|.||
T Consensus 278 -DIAGkgi-ANPiA~IlS~aMML~~~g~-------~~~A~~Ie~Av~~vl~~~g~~T~Dlg----g-------~~~T~e~ 337 (348)
T COG0473 278 -DIAGKGI-ANPIATILSAAMMLRHLGE-------KEAADAIENAVEKVLAEGGIRTPDLG----G-------NATTSEV 337 (348)
T ss_pred -cccCCCc-cChHHHHHHHHHHHHHhCC-------chHHHHHHHHHHHHHHcCCCCCcccC----C-------CccHHHH
Confidence 9999999 9999999999999999997 46999999999999995 69999998 6 6889999
Q ss_pred HHHHHHHHHH
Q 015124 398 IDAVADDLRA 407 (413)
Q Consensus 398 ~daV~~~l~~ 407 (413)
+|+|+++|.+
T Consensus 338 ~d~I~~~l~~ 347 (348)
T COG0473 338 GDAIAKALAS 347 (348)
T ss_pred HHHHHHHHhc
Confidence 9999999863
No 2
>PLN03065 isocitrate dehydrogenase (NADP+); Provisional
Probab=100.00 E-value=1.5e-107 Score=835.06 Aligned_cols=408 Identities=76% Similarity=1.181 Sum_probs=372.4
Q ss_pred CccceeccccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCc
Q 015124 2 AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPD 81 (413)
Q Consensus 2 ~~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~ 81 (413)
.|+||||+.||++|+|||||+|||+.++++|+.++++++|+++|+|.+++++||+++|++++++|++++|+||||++||+
T Consensus 70 ~~~ki~~~~piv~~~GDem~r~i~~~i~~~li~p~~di~~~~~dlG~e~rd~Tgd~v~~da~~aikk~~v~lKgAt~TP~ 149 (483)
T PLN03065 70 AADRIKVQNPIVEMDGDEMTRVIWQMIKDKLIFPYLDLDIKYFDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPD 149 (483)
T ss_pred hhccccccCCeEEecCCcchHHHHHHHHHHHhcCCCCceEEEEeCcHHHHHhhCCcCCHHHHHHHHHcCEEEECcccCCc
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe---eeceeee
Q 015124 82 EARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI---SLSVFDV 158 (413)
Q Consensus 82 ~~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv---nteG~Y~ 158 (413)
..+++++++++.|+|||++||+.||||+|+|||.|+|+|+++|||++|+.+.| |+++|.|+++|++|+ ..|-.|.
T Consensus 150 ~~rv~e~~lk~~w~SpN~tiR~~Ldl~v~rrPi~~~ni~r~vpg~~~pI~i~R--ha~gd~Y~~iD~vi~~~g~~~~~~~ 227 (483)
T PLN03065 150 EARVKEFGLKSMWRSPNGTIRNILNGTVFREPILCKNIPRLVPGWKKPICIGR--HAFGDQYRATDTVIKGPGKLKMVFV 227 (483)
T ss_pred cccccccccccccCCccHHHHHHcCCeEEeeeeeccccCccCCCCCCCeEEee--cccCCCcCceEEEEecCCeeEEEee
Confidence 87777888888999999999999999999999999999999999999999999 999999999999998 4677787
Q ss_pred cCCCCcccceeeecccCCCceEEEeecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccC
Q 015124 159 PEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKS 238 (413)
Q Consensus 159 g~~~~~~~~~~~~~~~~~~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~ 238 (413)
...+..+.+++++++.+ +++++++++|+++++||+|+||+||++|+++||++||+||||.+||+|+++|+||++++|+.
T Consensus 228 rEnte~~~e~~v~~f~~-~gva~~~~nT~~sieriAr~AF~yA~~rk~~Vt~v~KaNILK~~DGlF~dif~eVa~~eyk~ 306 (483)
T PLN03065 228 PEDGNAPVELDVYDFKG-PGVALAMYNVDESIRAFAESSMAMALQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEEQWKQ 306 (483)
T ss_pred cCCCCCcceeEeeccCC-CCeEEEEEECHHHHHHHHHHHHHHHHHcCCCEEEEeCCCcccchHHHHHHHHHHHHHHhhhh
Confidence 76543334445555554 67888888999999999999999999999999999999999999999999999999767777
Q ss_pred ccccCCeEEeeeeHHHHHHHHHhCCCceEEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccccccccccc
Q 015124 239 KFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYR 318 (413)
Q Consensus 239 ~~~~~~I~~~~~~VD~~a~~Lv~~P~~FViv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~ 318 (413)
+|.+++|+++|++||+||||||++|++|||||+|||||||||++|+++|||||+||+|+|+++.+++|||+||||||||+
T Consensus 307 ~yp~~~I~~e~~lIDa~~~~lvk~P~~FViv~~NlfGDIlSDl~A~l~GsLGl~pSanig~dg~~~~fEa~HGSapd~~~ 386 (483)
T PLN03065 307 KFEEHSIWYEHRLIDDMVAYAVKSEGGYVWACKNYDGDVQSDLLAQGFGSLGLMTSVLLSSDGKTLEAEAAHGTVTRHFR 386 (483)
T ss_pred cCCCCCceEEeeeHHHHHHHHHhCCCCcEEEeeccchhhhhHHHHHhcCchhhcccceeCCCCceEEEecCcCcCccccc
Confidence 77677899999999999999999999999999999999999999999999999999999999734799999999999998
Q ss_pred ccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHH
Q 015124 319 VHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFI 398 (413)
Q Consensus 319 ~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~ 398 (413)
.+|+||+++|||+|+|+|++|||+|+|.++.++.|.++|++|++||.+|+++|++|+|||.+.+|+..++...++|+||+
T Consensus 387 ~~iaGk~t~ANPiA~IlA~ammL~hlg~ld~~~~l~~~A~~Le~Av~~tie~G~~T~DLg~~~~G~~~~~~~~~~T~ef~ 466 (483)
T PLN03065 387 LHQKGQETSTNSIASIFAWTRGLEHRAKLDKNEELLDFVHKLESACIETVESGKMTKDLAILIHGPKVSREFYLNTEEFI 466 (483)
T ss_pred hhccCCCCCcChHHHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHHHHcCCcccccccccCCCcccCCCCcCHHHHH
Confidence 88999996699999999999999999999999999999999999999999999999999633224211233469999999
Q ss_pred HHHHHHHHHHhhcC
Q 015124 399 DAVADDLRARLSGK 412 (413)
Q Consensus 399 daV~~~l~~~~~~~ 412 (413)
|+|+++|+.+|.+.
T Consensus 467 daV~~~L~~~~~~~ 480 (483)
T PLN03065 467 DAVAQTLATKRGEP 480 (483)
T ss_pred HHHHHHHHHHhccC
Confidence 99999999887654
No 3
>PTZ00435 isocitrate dehydrogenase; Provisional
Probab=100.00 E-value=6.7e-106 Score=814.10 Aligned_cols=406 Identities=67% Similarity=1.084 Sum_probs=366.5
Q ss_pred CccceeccccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCc
Q 015124 2 AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPD 81 (413)
Q Consensus 2 ~~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~ 81 (413)
.|+||||..|++.|.||+|.+.+|+-+++.|+.+.++|+|+++++|.++++++|+++|++++++|+++|++||||++||.
T Consensus 2 ~~~~~~~~~~~v~~~~~em~~~~~~~~~~~~~~~~~~i~~~~~d~g~~~~~~tg~~lp~ea~eaik~~~v~LkGa~~TP~ 81 (413)
T PTZ00435 2 TGGKIKVKNPVVELDGDEMTRIIWKMIKEKLILPYLDVPIKYYDLSIENRDKTDDKVTVDAAEAIKKHKVGIKCATITPD 81 (413)
T ss_pred CcccccccCCeEEecccHHHHHHHHHHHHhhccCCCCceEEEEeCcHHHHHhcCCcCCHHHHHHHHHcCEEEECcccCCc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred chhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--ee-ceeee
Q 015124 82 EARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SL-SVFDV 158 (413)
Q Consensus 82 ~~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nt-eG~Y~ 158 (413)
..++.++++++.|+|||++||+.||||+|+|||.++++++++|||++|+.+.| |+++|.|+++|++++ || ||+|+
T Consensus 82 ~~~~~~~~l~~~~~S~n~~LR~~ldlyanvRPi~~k~i~~~~pg~~~~i~i~R--en~e~~y~~id~vi~rent~e~~y~ 159 (413)
T PTZ00435 82 EARVKEFNLKKMWKSPNGTIRNILDGTVFREPIIIKNIPRLVPGWKKPIVIGR--HAFGDQYKATDFVVDGPGKLELVFT 159 (413)
T ss_pred cccccccccccccCCchHHHHHHcCCeEEEeeeeccccCccCCCCCCCeeeec--cccCCCcCceEEEEecCCEEEEEEe
Confidence 64333555667799999999999999999999989999999999999998899 999999999999999 78 99999
Q ss_pred cCCCCcccceeeecccCCCceEEEeecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccC
Q 015124 159 PEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKS 238 (413)
Q Consensus 159 g~~~~~~~~~~~~~~~~~~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~ 238 (413)
+..+..|.+..++++.. ++++.+.+|||++++||+|+||+||++|+++||+|||+|||+.|||||+++|+||++++||+
T Consensus 160 ~~~g~~~~~~~~~~~~~-~~v~~~~~~Tr~~~eRIar~AF~~A~~r~~~Vt~v~KaNVlk~~dglf~~~~~eva~~eYpe 238 (413)
T PTZ00435 160 PADGSEPQRVDVFDFKG-GGVAMGMYNTDESIEGFARSCFQYALDRKMPLYLSTKNTILKKYDGRFKDIFQEIYDEEYKA 238 (413)
T ss_pred cCCCCcceeeeeeccCC-CCeeEEEEeCHHHHHHHHHHHHHHHHHcCCCEEEECCCCcchhhHHHHHHHHHHHHHHhCcc
Confidence 99554444444444444 56766689999999999999999999999899999999999999999999999999657999
Q ss_pred ccccCCeEEeeeeHHHHHHHHHhCCCceEEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccccccccccc
Q 015124 239 KFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYR 318 (413)
Q Consensus 239 ~~~~~~I~~~~~~VD~~a~~Lv~~P~~FViv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~ 318 (413)
+|.+++|++++++||+||||||++|++|||||+|||||||||++|+++|||||+||+|+|+++.+++|||+|||||++++
T Consensus 239 ~~~~~~I~~~~~lVDa~~m~lv~~P~~fViV~~NlfGDIlSDlaA~l~GglGlapSanig~d~~~a~FEp~HGSApdi~~ 318 (413)
T PTZ00435 239 KFEKAGLWYEHRLIDDMVAQAIKSEGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVCPDGKTVEAEAAHGTVTRHYR 318 (413)
T ss_pred ccccCCEEEEEeeHHHHHHHHhhCCCCeEEEeecccchhhhHHHHHhcCcccccccceeCCCCCeEEEEcCcCCccccch
Confidence 99999999999999999999999999999999999999999999999999999999999988512999999999998888
Q ss_pred ccccCC-CCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCC-cCCCccccCHHH
Q 015124 319 VHQKGG-ETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGS-KMTREHYLNTEE 396 (413)
Q Consensus 319 ~diaGk-~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~-~~~~~~~~sT~e 396 (413)
+||+|| ++ |||+|||||++|||+|||+++.++.+.++|++|++||.+|+++|++|+|||...+|+ ++++++.++|+|
T Consensus 319 ~~iaGk~~~-ANP~A~Ils~ammL~~lg~~~~~~~~~~~A~~ie~Av~~~i~~g~~T~Dlg~~~~G~~~~~~~~~~~T~e 397 (413)
T PTZ00435 319 QHQKGKETS-TNSIASIFAWTRGLAHRAKLDNNQELVKFCQALERSCIETIEAGFMTKDLAICVHGSSKVTRSDYLNTEE 397 (413)
T ss_pred hhhcCCCCc-cChHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHHcCCCccccccccCCCccccCCCCcCHHH
Confidence 888996 67 999999999999999999988888889999999999999999999999996110131 122344699999
Q ss_pred HHHHHHHHHHHHhhc
Q 015124 397 FIDAVADDLRARLSG 411 (413)
Q Consensus 397 ~~daV~~~l~~~~~~ 411 (413)
|+|+|+++|.++|-+
T Consensus 398 ~~daV~~~L~~~~~~ 412 (413)
T PTZ00435 398 FIDKVAEKLKKKLGA 412 (413)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999888753
No 4
>TIGR00127 nadp_idh_euk isocitrate dehydrogenase, NADP-dependent, eukaryotic type. This model does not discriminate cytosolic, mitochondrial, and chloroplast proteins. However, the model starts very near the amino end of the cytosolic form; the finding of additional amino-terminal sequence may indicate a transit peptide.
Probab=100.00 E-value=1.5e-105 Score=810.68 Aligned_cols=400 Identities=71% Similarity=1.126 Sum_probs=360.3
Q ss_pred cceeccccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcch
Q 015124 4 QKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEA 83 (413)
Q Consensus 4 ~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~ 83 (413)
+||||++|++++.||+|...+|+.+++.|+.+.++|+|+++|+|.+++++||+++|++++++|+++|++||||++||...
T Consensus 1 ~~~~~~~p~v~~~g~em~~~~~~~~~~~~~~~~~~i~~~~~d~g~~~~~~tg~~lp~ea~eaik~~dv~LkGa~~TP~~~ 80 (409)
T TIGR00127 1 SKIKVANPVVEMDGDEMTRIIWELIKDKLILPYVELDLKYYDLGVEYRDATNDQVTVDAAEAIKKYNVGVKCATITPDEA 80 (409)
T ss_pred CCccccCCeEEecCcHHHHHHHHHHHHhhccCCcCceEEEEeCcHHHHHhhCCcCCHHHHHHHHHcCEEEECcccCCccc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred hhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--ee-ceeeecC
Q 015124 84 RVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SL-SVFDVPE 160 (413)
Q Consensus 84 ~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nt-eG~Y~g~ 160 (413)
++.++.+++.|+|||++||+.||||+|+|||.++|+.+++|||++|+.+.| |++++.|+++|++++ || ||+|+|.
T Consensus 81 ~~~~~~l~k~~~S~n~~lR~~ldlyanvRPi~~~~~~~~~pg~~~~i~i~R--~~~~~~y~~iD~vivREnt~Eg~Y~g~ 158 (409)
T TIGR00127 81 RVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWEKPIIIGR--HAFGDQYRATDFVVPGPGKLELVYKPK 158 (409)
T ss_pred cccccccccccCCccHHHHHHcCCeEEeeeccccccCccCCCCCCCeeeec--cccCCCcCceEEEEecCCeeeEEEECC
Confidence 333444556789999999999999999999989999999999999999999 999999999999999 89 9999999
Q ss_pred CCCcccceeeecccCCCceEEEeecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCcc
Q 015124 161 GKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKF 240 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~ 240 (413)
++..+.+.++..+...++++.+.+|||++++||+|+||+||++|+++||+|||+|||+.|||+|+++|+||++++||++|
T Consensus 159 e~~~~~~~~~~~~~~~~~v~~~~~~T~~~~eRIar~AF~~A~~~~~~Vt~v~KaNVlk~~dglf~~~~~eva~~eYp~~~ 238 (409)
T TIGR00127 159 DGTQKVTLKVYDFEEGGGVAMAMYNTDESIEGFAHSSFQLALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAQYKSKF 238 (409)
T ss_pred CCCcccceeeeeccCCCCeEEEEEECHHHHHHHHHHHHHHHHHcCCCEEEEcCcchhhhhhHHHHHHHHHHHHHhCcccc
Confidence 87443222222222114577777799999999999999999999999999999999999999999999999744899999
Q ss_pred ccCCeEEeeeeHHHHHHHHHhCCCceEEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccccccccccccc
Q 015124 241 EAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVH 320 (413)
Q Consensus 241 ~~~~I~~~~~~VD~~a~~Lv~~P~~FViv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~d 320 (413)
.+.+|++++++||++|||||++|++|||||+|||||||||++|+++|||||+||+|+|+++...+|||+|||||++++++
T Consensus 239 ~~~~I~~~~~lVDa~~m~lv~~P~~fViv~~NlfGDIlSDlaA~l~GslGl~pSanig~~~~~~~fEp~HGSApdi~~~~ 318 (409)
T TIGR00127 239 EALGIWYEHRLIDDMVAQALKSEGGFIWACKNYDGDVQSDIVAQGFGSLGLMTSVLICPDGKTFEAEAAHGTVTRHYRMY 318 (409)
T ss_pred cCCCEEEEEeeHHHHHHHHhhCCCCcEEEecccchHHHHHHHHHhcCchhhhheeeeCCCCceEEeccccCCCcccchhh
Confidence 99999999999999999999999999999999999999999999999999999999998862357799999999877777
Q ss_pred ccCC-CCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcch----hhhhcCCcCCCccccCHH
Q 015124 321 QKGG-ETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDL----ALIIHGSKMTREHYLNTE 395 (413)
Q Consensus 321 iaGk-~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dl----g~~~~G~~~~~~~~~sT~ 395 (413)
|||| ++ |||+|+|||++|||+|+|+++.++.+.++|++|++||.+|+++|++|+|| | |+..++++.++|+
T Consensus 319 iaGk~~~-ANP~A~IlS~ammL~~lg~~~~~~g~~~~A~~Ie~Av~~~i~~g~~T~Dl~~~~G----G~~~~~~~~~~T~ 393 (409)
T TIGR00127 319 QKGQETS-TNSIASIFAWSRGLAHRAKLDNNPELSKFANILESACINTVEAGIMTKDLALILG----GSPVERSAYLNTE 393 (409)
T ss_pred hCCCCCc-cChHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHHHHhcCCcccccccccC----CCcccCCCCcCHH
Confidence 8997 67 99999999999999999988766778999999999999999999999999 5 5323344559999
Q ss_pred HHHHHHHHHHHHHhh
Q 015124 396 EFIDAVADDLRARLS 410 (413)
Q Consensus 396 e~~daV~~~l~~~~~ 410 (413)
||+|+|+++|+++|.
T Consensus 394 e~~daV~~~L~~~~~ 408 (409)
T TIGR00127 394 EFIDAVEERLKKKIA 408 (409)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999987764
No 5
>PRK08299 isocitrate dehydrogenase; Validated
Probab=100.00 E-value=1.4e-105 Score=810.44 Aligned_cols=390 Identities=68% Similarity=1.065 Sum_probs=331.9
Q ss_pred ccceeccccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcc
Q 015124 3 FQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (413)
Q Consensus 3 ~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~ 82 (413)
|+|||+++||++||||||||||+++++.+|++++++|+|+++++|+++++++|+++|++++++|+++|++||||++||..
T Consensus 1 ~~~~~~~~~~~~~~gd~i~~~~~~~~~~~~~~~~~~i~~~~~d~G~~~~~~~G~~lp~~tl~~ik~~da~LkGav~tp~~ 80 (402)
T PRK08299 1 MAKIKVKNPVVELDGDEMTRIIWKFIKDKLILPYLDIDLEYYDLGIENRDATDDQVTIDAANAIKKYGVGVKCATITPDE 80 (402)
T ss_pred CCccccCCceEEecCCCchHHHHHHHHHHHhccCCCeEEEEEcCCHHHHHHhCCcCCHHHHHHHHHCCEEEECCccCCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999963
Q ss_pred hhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe----------e
Q 015124 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI----------S 152 (413)
Q Consensus 83 ~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv----------n 152 (413)
.++.+.+++++++|+|+.|||+||||+|+|||+++++++++||+++|+.+.| +++++.|.++|++++ |
T Consensus 81 ~~~~~~~~~~~~~s~n~~LRk~ldLyaNiRPv~~k~i~~~~pg~~~~ivivR--EnTEg~Y~gi~~~~~r~~~~~~~~~~ 158 (402)
T PRK08299 81 ARVKEFNLKKMWKSPNGTIRNILGGTVFREPIICKNVPRLVPGWTKPIVIGR--HAYGDQYRATDFKVPGKGKLTLVFTG 158 (402)
T ss_pred ccccccCccccccCchHHHHHHcCCeEEEEeeecccccccCCCCCCCEEEEe--cccCCcccceeEEeccCccceeeeec
Confidence 2111111224689999999999999999999999999999999876654445 444444444444432 1
Q ss_pred eceeeecCCCCcccceeeecccCCCceEEE-e-ecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHH
Q 015124 153 LSVFDVPEGKDEKTELEVYNFTGEGGVALS-M-YNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQE 230 (413)
Q Consensus 153 teG~Y~g~~~~~~~~~~~~~~~~~~~va~~-~-~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~e 230 (413)
++| .+.+ +++.++ .+.+++ + ++||++++||+|+||+||++|++|||+|||+|||+.||||||++|+|
T Consensus 159 ~~g--~~~e------~~~~~~---~~~~~~~~~~~Tr~~~eRIa~~AF~~A~~r~~kVt~v~KaNVlk~t~glf~~~~~e 227 (402)
T PRK08299 159 EDG--EPIE------HEVHDF---PGAGVAMGMYNLDESIRDFARASFNYGLDRKYPVYLSTKNTILKAYDGRFKDIFQE 227 (402)
T ss_pred CCC--cccc------ceeccc---ccCceeEEEeecHHHHHHHHHHHHHHHHHcCCCEEEECCCCcchhhhHHHHHHHHH
Confidence 222 1111 111111 112334 4 49999999999999999999998999999999999999999999999
Q ss_pred HHHhhccCccccCCeEEeeeeHHHHHHHHHhCCCceEEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccc
Q 015124 231 VYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAH 310 (413)
Q Consensus 231 va~~eYp~~~~~~~I~~~~~~VD~~a~~Lv~~P~~FViv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~H 310 (413)
||+++||++|.+++|++++++||++|||||++|++|||||+|||||||||++|+|+||+|++||+|+|+++.++||||+|
T Consensus 228 vA~~~yp~~~~~~~i~~~~~~vDa~~~~lv~~P~~fVivt~NlfGDIlSDlaa~l~GglG~apSanig~~~~~a~FEp~H 307 (402)
T PRK08299 228 VYEAEFKEKFEAAGITYEHRLIDDMVASALKWEGGYVWACKNYDGDVQSDTVAQGFGSLGLMTSVLMTPDGKTVEAEAAH 307 (402)
T ss_pred HHHHhCccccccCcEEEEEeeHHHHHHHHHhCcCCcEEEEeccccchhhhHHHhhcCCcccccceeeCCCCCcEEEecCC
Confidence 99547999999999999999999999999999999999999999999999999999999999999999886128999999
Q ss_pred ccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCcc
Q 015124 311 GTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREH 390 (413)
Q Consensus 311 GSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~ 390 (413)
||||++++++|||||++|||+|||||++|||+|||+++.++++.++|++|++||.+++++|.+|+|||...+|. ..
T Consensus 308 GSAPD~~~~~IaGk~~~ANP~A~IlS~amML~~LG~~~~~~~l~~~a~~I~~Av~~~l~~g~~T~Dlg~~~g~~----~g 383 (402)
T PRK08299 308 GTVTRHYRQHQKGEETSTNPIASIFAWTRGLAHRGKLDGNPELVKFADTLEKVCIETVESGFMTKDLALLVGPD----QK 383 (402)
T ss_pred CCCcccccccccCCCCccCHHHHHHHHHHHHHHhCCccccchHHHHHHHHHHHHHHHHHcCCcCccchhccCCC----CC
Confidence 99997777779999944999999999999999999988888899999999999999999999999995110020 12
Q ss_pred ccCHHHHHHHHHHHHHHHh
Q 015124 391 YLNTEEFIDAVADDLRARL 409 (413)
Q Consensus 391 ~~sT~e~~daV~~~l~~~~ 409 (413)
.+||+||+|+|+++|.++|
T Consensus 384 ~~tT~e~~daIi~~l~~~~ 402 (402)
T PRK08299 384 WLTTEEFLDAIDENLEKAL 402 (402)
T ss_pred CcCHHHHHHHHHHHHHhhC
Confidence 5999999999999997764
No 6
>PRK08997 isocitrate dehydrogenase; Provisional
Probab=100.00 E-value=7.6e-105 Score=792.46 Aligned_cols=328 Identities=22% Similarity=0.251 Sum_probs=305.1
Q ss_pred ccccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhhHH
Q 015124 8 VANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKE 87 (413)
Q Consensus 8 m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~~ 87 (413)
|.++|++|||||||||||++++++|.+.+++|+|+++++|.++++++|+++|++++++|+++|++||||+++|.+.
T Consensus 1 ~~~~I~vipGDGIGpEV~~~a~~vl~~~~~~~~~~~~~~G~~~~~~~G~~lp~~~l~~~~~~da~L~Gavg~p~~~---- 76 (334)
T PRK08997 1 MKQTITVIPGDGIGPSIIDATLKILDKLGCDFEYEFADAGLTALEKHGELLPQRTLDLIEKNKIALKGPLTTPVGE---- 76 (334)
T ss_pred CCcEEEEECCCcccHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHhhCCCCCHHHHHHHHHCCEEEECcccCCCCc----
Confidence 5689999999999999999999999877889999999999999999999999999999999999999999999643
Q ss_pred HHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCCcc
Q 015124 88 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKDEK 165 (413)
Q Consensus 88 ~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~~~ 165 (413)
+..|+++.|||+||||+|+||| |++||+++|+ +++|+||| ||||+|+|.++.
T Consensus 77 -----~~~~~~~~LR~~ldlyanvRP~------k~~~g~~~~~-------------~~iD~vivREnteG~Y~g~~~~-- 130 (334)
T PRK08997 77 -----GFTSINVTLRKKFDLYANVRPV------LSFPGTKARY-------------DNIDIITVRENTEGMYSGEGQT-- 130 (334)
T ss_pred -----CccchHHHHHHHcCCeEEEeec------ccCCCCCCcc-------------CCcCEEEEEeccCceecCccce--
Confidence 4568899999999999999999 8899998763 59999999 899999998641
Q ss_pred cceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCC-CEEEEeCCCccccccHHHHHHHHHHHHhhccCccccC
Q 015124 166 TELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAA 243 (413)
Q Consensus 166 ~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~ 243 (413)
. ..+ ..++++ ++|||++++||+|+||+||++|++ +||+|||+|||+.|+|||+++|+|||+ +||
T Consensus 131 ----~--~~~-~~~a~~~~~~Tr~~~eRi~r~Af~~A~~r~~~~Vt~v~KaNvl~~t~glf~~~~~eva~-~yP------ 196 (334)
T PRK08997 131 ----V--SED-GETAEATSIITRKGAERIVRFAYELARKEGRKKVTAVHKANIMKSTSGLFLKVAREVAL-RYP------ 196 (334)
T ss_pred ----e--cCC-CceEEEEEEeeHHHHHHHHHHHHHHHHhcCCCeEEEEeCCCcchhhhHHHHHHHHHHHh-hCC------
Confidence 0 011 238899 999999999999999999999964 699999999999999999999999997 799
Q ss_pred CeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccccccccccccccc
Q 015124 244 GIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQK 322 (413)
Q Consensus 244 ~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~dia 322 (413)
+|+++|+|||++|||||++|++| ||||+|||||||||++|+++||+||+||+|+|++ ++||||+||||| |||
T Consensus 197 ~V~~~~~~vDa~~~~lv~~P~~fdVivt~NlfGDILSDlaa~l~GglGl~psanig~~--~a~FEp~HGSAP-----dIA 269 (334)
T PRK08997 197 DIEFEEMIVDATCMQLVMNPEQFDVIVTTNLFGDILSDLCAGLVGGLGMAPGANIGRD--AAIFEAVHGSAP-----DIA 269 (334)
T ss_pred CeEEEeeeHHHHHHHHhhCcccCcEEEEcCcccchhhHHHHHhcCCCCcCcceeECCC--ceEEECCCCchh-----hhC
Confidence 99999999999999999999999 9999999999999999999999999999999988 599999999999 999
Q ss_pred CCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC-CCCcchhhhhcCCcCCCccccCHHHHHHHH
Q 015124 323 GGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKMTREHYLNTEEFIDAV 401 (413)
Q Consensus 323 Gk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV 401 (413)
|||+ |||+|+|||++|||+|||+ .++|++|++||.+++++| .+|+||| | .+||+||+|+|
T Consensus 270 Gk~i-ANP~a~IlS~amML~~lG~-------~~~A~~i~~AV~~vl~~G~~~T~DlG----G-------~a~T~e~~~av 330 (334)
T PRK08997 270 GKNL-ANPTSVILAAIQMLEYLGM-------PDKAERIRKAIVAVIEAGDRTTRDLG----G-------THGTTDFTQAV 330 (334)
T ss_pred CCCc-cCcHHHHHHHHHHHHHcCC-------hhHHHHHHHHHHHHHHcCCccCcccC----C-------CcCHHHHHHHH
Confidence 9999 9999999999999999996 689999999999999999 5799997 6 69999999999
Q ss_pred HHHH
Q 015124 402 ADDL 405 (413)
Q Consensus 402 ~~~l 405 (413)
+++|
T Consensus 331 ~~~l 334 (334)
T PRK08997 331 IDRL 334 (334)
T ss_pred HhhC
Confidence 9875
No 7
>PRK08194 tartrate dehydrogenase; Provisional
Probab=100.00 E-value=2.1e-104 Score=794.84 Aligned_cols=337 Identities=18% Similarity=0.188 Sum_probs=306.8
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcC-----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchh
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFP-----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR 84 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~-----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~ 84 (413)
++|++|||||||||||++++++|.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+.
T Consensus 4 ~~I~vipGDGIGpEV~~~a~~vl~a~~~~~~~~~~e~~~~~~G~~~~~~~G~~lp~~tl~~~k~~dail~G~vg~p~~~- 82 (352)
T PRK08194 4 FKIAVIPGDGVGKEVVPAAVRVLKAVAEVHGGLKFEFTEFPWSCEYYLEHGEMMPEDGLEQLKQFDAIFLGAVGNPKLV- 82 (352)
T ss_pred eEEEEECCCCchHHHHHHHHHHHHHHHhhccCCceEEEEEcCcHHHHHHhCCCCCHHHHHHHHhCCEEEEcccCCCCcC-
Confidence 78999999999999999999988643 689999999999999999999999999999999999999999999632
Q ss_pred hHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCC
Q 015124 85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGK 162 (413)
Q Consensus 85 ~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~ 162 (413)
+. .++..++++.|||+||||+|+||| +++||+++|++ + .+++|+||| ||||+|+|.++
T Consensus 83 -~~---~~~~~~~~l~LR~~ldLyaNvRP~------k~~pg~~splk--~--------~~~iD~vivREnteG~Y~g~~~ 142 (352)
T PRK08194 83 -PD---HISLWGLLIKIRREFEQVINIRPA------KQLRGIKSPLA--N--------PKDFDLLVVRENSEGEYSEVGG 142 (352)
T ss_pred -CC---CCCchhhHHHHHHHcCCEEEEEee------ecCCCCCCCCC--C--------CCCCCEEEEEeCCCccccCCCc
Confidence 10 013345589999999999999999 88999998875 1 369999999 89999999864
Q ss_pred CcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCccc
Q 015124 163 DEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFE 241 (413)
Q Consensus 163 ~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~ 241 (413)
.. ..+..++|++ ++|||+++|||+|+||+||++|++|||+|||+|||+.|++||+++|+||++ +||
T Consensus 143 ~~--------~~g~~~~a~~~~~~Tr~~~eRI~r~Af~~A~~r~~~Vt~v~KaNvl~~t~~lf~~~~~eva~-~yp---- 209 (352)
T PRK08194 143 RI--------HRGEDEIAIQNAVFTRKGTERAMRYAFELAAKRRKHVTSATKSNGIVHSMPFWDEVFQEVGK-DYP---- 209 (352)
T ss_pred cc--------cCCccceEEEEEEeeHHHHHHHHHHHHHHHHHcCCcEEEEeCcchhhhhHHHHHHHHHHHHh-hCC----
Confidence 21 0122457899 999999999999999999999978899999999999999999999999997 899
Q ss_pred cCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCc-eEEEccccccccccccc
Q 015124 242 AAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGK-TIEAEAAHGTVTRHYRV 319 (413)
Q Consensus 242 ~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~-~a~FEp~HGSAp~~~~~ 319 (413)
+|+++++|||++|||||++|++| ||||+|||||||||++|+++||+||+||+|||+++. ++||||+|||||
T Consensus 210 --~V~~~~~~vDa~~~~Lv~~P~~fDVIVt~NlfGDILSDlaa~l~GslGl~pSanig~~~~~~alFEp~HGSAP----- 282 (352)
T PRK08194 210 --EIETDSQHIDALAAFFVTRPEEFDVIVASNLFGDILTDIGAAIMGSIGIAPAANINVNGKYPSMFEPVHGSAP----- 282 (352)
T ss_pred --CceeeehhHHHHHHHHhhChhhCcEEEEccchHHHHhHHHHHhcCCccccceeeecCCCCcceEEECCCCCch-----
Confidence 99999999999999999999999 999999999999999999999999999999997642 499999999999
Q ss_pred cccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHHH
Q 015124 320 HQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFID 399 (413)
Q Consensus 320 diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~d 399 (413)
||||||+ |||+|+|||++|||+|||. .++|++|++||.+++++|++|+||| | ++||+||+|
T Consensus 283 diAGk~i-ANP~a~IlS~amML~~lg~-------~~~A~~i~~Av~~~l~~g~~T~DlG----G-------~~~T~e~~~ 343 (352)
T PRK08194 283 DIAGKGI-ANPIGQIWTAKLMLDHFGE-------EELGSHLLDVIEDVTEDGIKTPDIG----G-------RATTDEVTD 343 (352)
T ss_pred hhCCCCc-CCcHHHHHHHHHHHHHcCC-------hhHHHHHHHHHHHHHHcCCCcCcCC----C-------CcCHHHHHH
Confidence 9999999 9999999999999999996 6899999999999999999999997 6 689999999
Q ss_pred HHHHHHH
Q 015124 400 AVADDLR 406 (413)
Q Consensus 400 aV~~~l~ 406 (413)
+|+++|+
T Consensus 344 ai~~~l~ 350 (352)
T PRK08194 344 EIISRLK 350 (352)
T ss_pred HHHHHHh
Confidence 9999983
No 8
>PLN02329 3-isopropylmalate dehydrogenase
Probab=100.00 E-value=1.9e-104 Score=803.70 Aligned_cols=353 Identities=16% Similarity=0.158 Sum_probs=311.8
Q ss_pred ccccEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcch
Q 015124 8 VANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEA 83 (413)
Q Consensus 8 m~~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~ 83 (413)
|.++|++|||||||||||++++++|.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+.
T Consensus 45 ~~~~IavipGDGIGPEV~~aa~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lP~~tl~~~~~~DaiL~Gavg~p~~~ 124 (409)
T PLN02329 45 KRYNIALLPGDGIGPEVISVAKNVLQKAGSLEGLEFDFQEMPVGGAALDLVGVPLPEETFTAAKQSDAILLGAIGGYKWD 124 (409)
T ss_pred ceEEEEEECCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcCCHHHHHHhCCcCCHHHHHHHHHCCEEEECcccCCCCC
Confidence 4588999999999999999999988643 689999999999999999999999999999999999999999999643
Q ss_pred hhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcc--hhhhHHHHHhhhcccCCcceEEe--eeceeeec
Q 015124 84 RVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLL--VINIEQLIQLFKDLANLNWCLVI--SLSVFDVP 159 (413)
Q Consensus 84 ~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~--pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g 159 (413)
..+. ..+++ +++++|||+||||+|+||| +++||+++ |++-. .++++|+||| ||||+|+|
T Consensus 125 ~~~~--~~~~e-~~ll~LRk~ldLyaNvRPv------r~~pg~~~~splk~~--------~~~~iD~vIVREnTEG~Y~G 187 (409)
T PLN02329 125 KNEK--HLRPE-MALFYLRRDLKVFANLRPA------TVLPQLVDASTLKKE--------VAEGVDMMIVRELTGGIYFG 187 (409)
T ss_pred CCcc--ccccc-ccHHHHHHHcCCeEeeeee------eccCCCCCcCccccc--------ccCCceEEEEEECCCCeecC
Confidence 1000 01122 4589999999999999999 88899874 76411 1468999999 89999999
Q ss_pred CCCCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccC
Q 015124 160 EGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKS 238 (413)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~ 238 (413)
.++.. .... .+ .+++++ ++|||+++|||+|+||+||++|++|||+|||+|||+ +++||+++|+|||+ +||
T Consensus 188 ~~~~~----~~~~-~~-~~~a~~~~~iTr~~~eRI~r~AFe~A~~r~~kVT~v~KaNVl~-t~~lf~~~~~evA~-eyP- 258 (409)
T PLN02329 188 EPRGI----TINE-NG-EEVGVSTEIYAAHEIDRIARVAFETARKRRGKLCSVDKANVLD-ASILWRKRVTALAS-EYP- 258 (409)
T ss_pred CCcce----eccc-CC-ceeEEEeEEecHHHHHHHHHHHHHHHHHcCCeEEEEECCCCcc-chHHHHHHHHHHHh-hCC-
Confidence 86421 1000 12 468999 999999999999999999999988999999999999 99999999999997 899
Q ss_pred ccccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccc
Q 015124 239 KFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHY 317 (413)
Q Consensus 239 ~~~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~ 317 (413)
+|+++++|||++|||||++|++| ||||+|||||||||++|+|+|||||+||+|||+++ ++||||+|||||
T Consensus 259 -----dV~~~~~~VDa~a~~LV~~P~~FDVIVt~NLfGDILSDlaa~l~GglGlaPSanig~~~-~a~FEpvHGSAP--- 329 (409)
T PLN02329 259 -----DVELSHMYVDNAAMQLIRDPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESG-PGLFEPIHGSAP--- 329 (409)
T ss_pred -----CcccchhHHHHHHHHHhcCchhCCEEEEcCcccccccHHHHHhcCCcccCceeecCCCC-ceeeeccCCCch---
Confidence 99999999999999999999999 99999999999999999999999999999999886 699999999999
Q ss_pred cccccCCCCccChHHHHHHHHHHHHH-hcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHH
Q 015124 318 RVHQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEE 396 (413)
Q Consensus 318 ~~diaGk~i~ANP~A~IlS~ammL~~-lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e 396 (413)
||||||+ |||+|+|||++|||+| ||. .++|++|++||.+++++|.+|+||+.. +| +.++|+|
T Consensus 330 --dIAGk~i-ANP~A~ILS~amML~~~Lg~-------~~~A~~I~~AV~~vl~~g~~T~Dl~~~-Gg------~~~~T~e 392 (409)
T PLN02329 330 --DIAGQDK-ANPLATILSAAMLLKYGLGE-------EKAAKRIEDAVVDALNKGFRTGDIYSP-GN------KLVGCKE 392 (409)
T ss_pred --hhcCCcc-cChHHHHHHHHHHHhhhCCC-------HHHHHHHHHHHHHHHHcCCcCcccccC-CC------CccCHHH
Confidence 9999999 9999999999999999 996 789999999999999999999999310 04 1389999
Q ss_pred HHHHHHHHHHHHhhcC
Q 015124 397 FIDAVADDLRARLSGK 412 (413)
Q Consensus 397 ~~daV~~~l~~~~~~~ 412 (413)
|+|+|+++|++++++.
T Consensus 393 ~~daIi~~l~~~~~~~ 408 (409)
T PLN02329 393 MGEEVLKSVDSKVPAT 408 (409)
T ss_pred HHHHHHHHHHhhCCCC
Confidence 9999999999988763
No 9
>PLN00118 isocitrate dehydrogenase (NAD+)
Probab=100.00 E-value=3.1e-104 Score=795.52 Aligned_cols=332 Identities=25% Similarity=0.237 Sum_probs=308.5
Q ss_pred ccceeccccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcc
Q 015124 3 FQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (413)
Q Consensus 3 ~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~ 82 (413)
|+.-...++|++|||||||||||++++++|.+.+++|+|+++++|+++++++|+++|++++++|+++|++||||+++|..
T Consensus 35 ~~~~~~~~~I~vipGDGIGpEV~~aa~~Vl~a~~~~ie~~~~~~G~~~~~~~G~~lp~~~l~~~~~~da~L~G~i~~p~~ 114 (372)
T PLN00118 35 FSSSSTPITATLFPGDGIGPEIAESVKQVFTAAGVPIEWEEHYVGTTVDPRTGSFLTWESLESVRRNKVGLKGPMATPIG 114 (372)
T ss_pred hccCCCCeEEEEECCCcccHHHHHHHHHHHHhcCCCeEEEEEeCcHHHHHhcCCcCCHHHHHHHHHCCEEEECCccCCcc
Confidence 33334458999999999999999999999988899999999999999999999999999999999999999999999953
Q ss_pred hhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecC
Q 015124 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPE 160 (413)
Q Consensus 83 ~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~ 160 (413)
. .+.|+|++|||+||||+|+||| |++||+++| ++++|+||| ||||+|+|.
T Consensus 115 ~---------~~~s~~~~LRk~ldLyaNvRPv------r~~pg~~~~-------------~~~iD~vIVREnteG~Y~g~ 166 (372)
T PLN00118 115 K---------GHRSLNLTLRKELGLYANVRPC------YSLPGYKTR-------------YDDVDLVTIRENTEGEYSGL 166 (372)
T ss_pred c---------cccCchHHHHHHcCCeeeeccc------ccCCCccCc-------------ccCceEEEEEecCCCcccce
Confidence 2 4678899999999999999999 889999876 368999999 899999998
Q ss_pred CCCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCC-CEEEEeCCCccccccHHHHHHHHHHHHhhccC
Q 015124 161 GKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIFQEVYEANWKS 238 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~ 238 (413)
++. .. ++++++ ++|||+++|||+|+||+||++|++ |||+|||+|||+.|||||+++|+||++ +||
T Consensus 167 ~~~----------~~-~gv~~~~~v~Tr~~~eRIar~AF~~A~~r~~k~Vt~v~KaNvlk~tdglf~e~~~eva~-eyP- 233 (372)
T PLN00118 167 EHQ----------VV-RGVVESLKIITRQASLRVAEYAFHYAKTHGRKRVSAIHKANIMKKTDGLFLKCCREVAE-KYP- 233 (372)
T ss_pred eee----------cc-CCeEEEEEecCHHHHHHHHHHHHHHHHHcCCCeEEEEECCccchhhhHHHHHHHHHHHh-hCC-
Confidence 541 11 468899 999999999999999999999964 699999999999999999999999998 799
Q ss_pred ccccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccc
Q 015124 239 KFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHY 317 (413)
Q Consensus 239 ~~~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~ 317 (413)
+|++++++||++|||||++|++| ||||+|||||||||++|+++||+||+||+|||+++ ++||||+|||||
T Consensus 234 -----dI~~~~~~VDa~a~~Lv~~P~~fDViVt~NLfGDILSDlaa~l~GglGlapSanig~~~-~a~FEpvHGSAP--- 304 (372)
T PLN00118 234 -----EIVYEEVIIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGENG-LALAEAVHGSAP--- 304 (372)
T ss_pred -----CceEEeeeHHHHHHHhccCcccCcEEEEcCcccchhhHHHHHhcCCcccCcceeecCCC-CeEEECCCCChh---
Confidence 99999999999999999999999 99999999999999999999999999999999987 699999999999
Q ss_pred cccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC-CCCcchhhhhcCCcCCCccccCHHH
Q 015124 318 RVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKMTREHYLNTEE 396 (413)
Q Consensus 318 ~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg~~~~G~~~~~~~~~sT~e 396 (413)
||||||+ |||+|||||++|||+|||+ .++|++|++||.+++++| ++|+||| | .+||+|
T Consensus 305 --dIAGk~i-ANP~A~IlS~amML~~lG~-------~~~A~~I~~Av~~~l~~G~~~T~DlG----G-------~~sT~e 363 (372)
T PLN00118 305 --DIAGKNL-ANPTALLLSAVMMLRHLKL-------NEQAEQIHNAILNTIAEGKYRTADLG----G-------SSTTTD 363 (372)
T ss_pred --hhCCCCC-cCcHHHHHHHHHHHHHcCC-------hHHHHHHHHHHHHHHHcCCccCcccC----C-------CcCHHH
Confidence 9999999 9999999999999999996 689999999999999999 8999998 6 689999
Q ss_pred HHHHHHHHH
Q 015124 397 FIDAVADDL 405 (413)
Q Consensus 397 ~~daV~~~l 405 (413)
|+|+|+++|
T Consensus 364 ~~dav~~~l 372 (372)
T PLN00118 364 FTKAICDHL 372 (372)
T ss_pred HHHHHHhhC
Confidence 999999875
No 10
>PRK14025 multifunctional 3-isopropylmalate dehydrogenase/D-malate dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-103 Score=783.01 Aligned_cols=320 Identities=23% Similarity=0.226 Sum_probs=300.9
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhhHHHH
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFV 89 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~~~~ 89 (413)
++|++|||||||||||++++++|.+.+++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.
T Consensus 2 ~~I~vipGDGIGpEv~~~~~~vl~~~~~~~~~~~~~~G~~~~~~~G~~lp~~~l~~~~~~da~l~G~vg~p~-------- 73 (330)
T PRK14025 2 HKICVIEGDGIGKEVVPAALHVLEATGLPFEFVYAEAGDEVFEKTGKALPEETIEAAKEADAVLFGAAGETA-------- 73 (330)
T ss_pred eEEEEECCCcccHHHHHHHHHHHHhcCCcEEEEEEcCCHHHHHHhCCCCCHHHHHHHHHCCEEEEccCCCCc--------
Confidence 689999999999999999999998888999999999999999999999999999999999999999999873
Q ss_pred hhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCCcccc
Q 015124 90 LKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKDEKTE 167 (413)
Q Consensus 90 ~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~~~~~ 167 (413)
.++++.|||+||||+|+||| |++||+++| ++++|+||| ||||+|+|.++.
T Consensus 74 -----~~~~~~LR~~ldlyanvRP~------r~~pg~~~~-------------~~~iD~vivREnteG~Y~g~~~~---- 125 (330)
T PRK14025 74 -----ADVIVKLRRILDTYANVRPV------KSYKGVKCL-------------YPDIDYVIVRENTEGLYKGIEAE---- 125 (330)
T ss_pred -----cchHHHHHHHcCCeEEEEEe------ecCCCCCCc-------------cCCcCEEEEEECCCceecCcccc----
Confidence 24589999999999999999 889999876 358999999 899999998642
Q ss_pred eeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhC----CC-CEEEEeCCCccccccHHHHHHHHHHHHhhccCccc
Q 015124 168 LEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK----KW-PLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFE 241 (413)
Q Consensus 168 ~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r----~~-~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~ 241 (413)
.. ++++++ ++|||++++||+|+||+||++| ++ +||++||+|||+.|||||+++|+||++ +||
T Consensus 126 ------~~-~~~~~~~~~~Tr~~~~Ri~r~Af~~A~~r~~~~~~k~Vt~v~KaNvl~~t~glf~e~~~eva~-~yp---- 193 (330)
T PRK14025 126 ------IA-DGVTVATRVITRKASERIFRFAFEMAKRRKKMGKEGKVTCAHKANVLKKTDGLFKKTFYEVAK-EYP---- 193 (330)
T ss_pred ------cC-CCceEEeEeccHHHHHHHHHHHHHHHHhccccCCCCeEEEEECCCchhhhhHHHHHHHHHHHh-hCC----
Confidence 11 467899 9999999999999999999999 44 699999999999999999999999997 899
Q ss_pred cCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccccccccccccc
Q 015124 242 AAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVH 320 (413)
Q Consensus 242 ~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~d 320 (413)
+|++++++||++|||||++|++| ||||+|||||||||++|+++||+||+||+|+|++ ++||||+||||| |
T Consensus 194 --~i~~~~~~vDa~~~~lv~~P~~fDVivt~NlfGDILSDlaa~l~GglGl~psanig~~--~a~FEp~HGSAP-----d 264 (330)
T PRK14025 194 --DIKAEDYYVDAMNMYIITRPQTFDVVVTSNLFGDILSDGAAGLVGGLGLAPSANIGDK--YGLFEPVHGSAP-----D 264 (330)
T ss_pred --CeEEEeeeHHHHHHHHhcCcccCcEEEEcCcccchhhHHHHHhcCCCCcccceeeCCC--cceeEcCCCCch-----h
Confidence 99999999999999999999999 9999999999999999999999999999999988 599999999999 9
Q ss_pred ccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHHHH
Q 015124 321 QKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDA 400 (413)
Q Consensus 321 iaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~da 400 (413)
|||||+ |||+|||||++|||+|||+ .++|++|++||.+++++|++|+||| | .+||+||+|+
T Consensus 265 iAGk~i-ANP~a~IlS~ammL~~lG~-------~~~A~~I~~Av~~vl~~g~~T~DlG----G-------~~~T~e~~~a 325 (330)
T PRK14025 265 IAGKGI-ANPTATILTAVLMLRHLGE-------NEEADKVEKALEEVLALGLTTPDLG----G-------NLSTMEMAEE 325 (330)
T ss_pred hCCCCC-cCcHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHcCCCCcccC----C-------CcCHHHHHHH
Confidence 999999 9999999999999999996 6899999999999999999999997 6 6999999999
Q ss_pred HHHHH
Q 015124 401 VADDL 405 (413)
Q Consensus 401 V~~~l 405 (413)
|+++|
T Consensus 326 v~~~~ 330 (330)
T PRK14025 326 VAKRV 330 (330)
T ss_pred HHHhC
Confidence 99874
No 11
>TIGR02089 TTC tartrate dehydrogenase. Tartrate dehydrogenase catalyzes the oxidation of both meso- and (+)-tartrate as well as a D-malate. These enzymes are closely related to the 3-isopropylmalate and isohomocitrate dehydrogenases found in TIGR00169 and TIGR02088, respectively.
Probab=100.00 E-value=7.2e-104 Score=791.61 Aligned_cols=338 Identities=20% Similarity=0.201 Sum_probs=305.2
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcC-----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchh
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFP-----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR 84 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~-----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~ 84 (413)
++|++||||||||||+++++++|.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+.
T Consensus 4 ~~I~vipGDGIGpEV~~aa~~Vl~a~~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~k~~da~L~G~vg~p~~~- 82 (352)
T TIGR02089 4 YRIAAIPGDGIGKEVVAAALQVLEAAAKRHGGFSLHFTEFPWSCDYYKEHGKMMPEDGLEKLKKFDAIFLGAVGWPALV- 82 (352)
T ss_pred eEEEEECCCcccHHHHHHHHHHHHHHHhhcCCcceEEEEECCcHHHHHHhCCCCCHHHHHHHHhCCEEEEecccCCCCC-
Confidence 78999999999999999999988643 589999999999999999999999999999999999999999999532
Q ss_pred hHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCC
Q 015124 85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGK 162 (413)
Q Consensus 85 ~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~ 162 (413)
|. .....+++++|||+||||+|+||| +++||+++|++..+ .+++|+||| ||||+|+|.++
T Consensus 83 -~~---~~~~~~~~l~LRk~ldLyaNvRP~------~~~~g~~sp~k~~~--------~~~iD~vivREnteG~Y~G~~~ 144 (352)
T TIGR02089 83 -PD---HISLWGLLLKIRREFDQYANVRPA------KLLPGVTSPLRNCG--------PGDFDFVVVRENSEGEYSGVGG 144 (352)
T ss_pred -CC---ccCchhhHHHHHHHcCCeEEEEEe------ecCCCCCCcccccc--------CCCCCEEEEEecCCcccccccc
Confidence 11 012345689999999999999999 88899998875211 368999999 89999999854
Q ss_pred CcccceeeecccCC-CceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCcc
Q 015124 163 DEKTELEVYNFTGE-GGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKF 240 (413)
Q Consensus 163 ~~~~~~~~~~~~~~-~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~ 240 (413)
.. ..+. .+.|++ ++|||++++||+|+||+||++|++|||+|||+|||+.|+|||+++|+||++ +||
T Consensus 145 ~~--------~~~~~~~~a~~~~~~tr~~~eRi~r~Af~~A~~rr~kVt~v~KaNvl~~t~~lf~~~~~eva~-~yp--- 212 (352)
T TIGR02089 145 RI--------HRGTDEEVATQNAIFTRKGVERIMRFAFELAQKRRKHLTSATKSNGIRHSMPFWDEVFAEVAA-EYP--- 212 (352)
T ss_pred cc--------cCCccceeEEEeEEecHHHHHHHHHHHHHHHHHcCCCEEEEeCCcchhhhhHHHHHHHHHHHh-hCC---
Confidence 10 0111 357899 999999999999999999999977899999999999999999999999997 899
Q ss_pred ccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCc-eEEEcccccccccccc
Q 015124 241 EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGK-TIEAEAAHGTVTRHYR 318 (413)
Q Consensus 241 ~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~-~a~FEp~HGSAp~~~~ 318 (413)
+|+++|+|||++|||||++|++| ||||+|||||||||++|+++||+||+||+|||+++. ++||||+|||||
T Consensus 213 ---~v~~~~~~vD~~~~~lv~~P~~fDVivt~NlfGDILSD~aa~l~GglGl~psanig~~~~~~a~fEp~HGSAP---- 285 (352)
T TIGR02089 213 ---DVEWDSYHIDALAARFVLKPETFDVIVASNLFGDILSDLGAALMGSLGVAPSANINPEGKFPSMFEPVHGSAP---- 285 (352)
T ss_pred ---CceEeeehHHHHHHHHhcChhhCcEEEecccchhhhhHHHHHhcCCccccceEEecCCCCcceeeecCCCCch----
Confidence 99999999999999999999999 999999999999999999999999999999997642 489999999999
Q ss_pred ccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHH
Q 015124 319 VHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFI 398 (413)
Q Consensus 319 ~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~ 398 (413)
||||||+ |||+|||||++|||+|||. .++|++|++||.+++++|++|+||| | .+||+||+
T Consensus 286 -diAGk~i-ANP~a~Ils~amML~~lg~-------~~~A~~I~~Av~~~l~~g~~T~DlG----G-------~~sT~e~~ 345 (352)
T TIGR02089 286 -DIAGKGI-ANPIGAIWTAAMMLEHLGE-------KEAGAKIMDAIERVTAAGILTPDVG----G-------KATTSEVT 345 (352)
T ss_pred -hhcCCCc-cCcHHHHHHHHHHHHHcCC-------hhHHHHHHHHHHHHHHcCCccCCCC----C-------CcCHHHHH
Confidence 9999999 9999999999999999996 6899999999999999999999997 6 68999999
Q ss_pred HHHHHHH
Q 015124 399 DAVADDL 405 (413)
Q Consensus 399 daV~~~l 405 (413)
|+|+++|
T Consensus 346 ~ai~~~l 352 (352)
T TIGR02089 346 EAVCNAL 352 (352)
T ss_pred HHHHhhC
Confidence 9999875
No 12
>PLN00103 isocitrate dehydrogenase (NADP+); Provisional
Probab=100.00 E-value=2.4e-103 Score=795.83 Aligned_cols=391 Identities=84% Similarity=1.268 Sum_probs=336.0
Q ss_pred CCccceeccccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCC
Q 015124 1 MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITP 80 (413)
Q Consensus 1 ~~~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p 80 (413)
||++||||+.||++|||||||+|++++++++|++++++|+|+++++|++++++||+++|++++++|+++|++||||++||
T Consensus 1 ~~~~~~~~~~p~~~~~Gd~~~~~~~~~~~~~~~~~~~~i~~~~~d~G~~~~~~tg~~lp~e~le~~k~~da~lkGav~tp 80 (410)
T PLN00103 1 MAFEKIKVANPIVEMDGDEMTRVIWKSIKDKLIFPFLDLDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITP 80 (410)
T ss_pred CCcccccccCCeEEecCCcchHHHHHHHHHHHhcCCCCeEEEEEcCCHHHHHHhCCcCCHHHHHHHHHCCEEEECCccCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhccc----------CCcceEE
Q 015124 81 DEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLA----------NLNWCLV 150 (413)
Q Consensus 81 ~~~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~----------~~iD~vi 150 (413)
...++.+.+++++++|+|++||++||||+|+||+.++++++++||+++|+.++| |++++.| +++|+||
T Consensus 81 ~~~~~~~~~~~~~~~s~n~~lRk~ldlyanvRP~~vk~~~~~~~g~~~~i~~~~--~~~~~~~~~~d~v~~~~~~id~vi 158 (410)
T PLN00103 81 DEARVKEFGLKQMWKSPNGTIRNILNGTVFREPIICKNIPRLVPGWTKPICIGR--HAFGDQYRATDAVIKGPGKLKLVF 158 (410)
T ss_pred ccccccccCccccccCchHHHHHHcCCeEEecchhccccCccCCCCCCceeecc--cccccccccceeccCCCCceEEEE
Confidence 533111112234589999999999999999999666777778889999998888 8888887 4566678
Q ss_pred e--eeceeeecCCCCcccceeeecccCCCceEEE-eec-ChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHH
Q 015124 151 I--SLSVFDVPEGKDEKTELEVYNFTGEGGVALS-MYN-TDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKD 226 (413)
Q Consensus 151 v--nteG~Y~g~~~~~~~~~~~~~~~~~~~va~~-~~~-Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~ 226 (413)
| ||||+| +. ++..+.+ ..+++ +++ |+++++||+|+||+||++|+++||+|||+|||+.++|+||+
T Consensus 159 vRENTEg~y-e~--------~~~~~~g--~~~v~~~~~~T~~~~~Riar~AFe~A~~r~~~vt~v~KaNVlk~~dglf~~ 227 (410)
T PLN00103 159 VPEGKDEKT-EL--------EVYNFTG--AGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKD 227 (410)
T ss_pred EecCCCcee-EE--------EeeccCC--CcceEEEEEcCHHHHHHHHHHHHHHHHhcCCcEEEECCCCCchhhHHHHHH
Confidence 8 799999 21 1111122 23445 665 99999999999999999999899999999999999999999
Q ss_pred HHHHHHHh----hccCccccCCeEEeeeeHHHHHHHHHhCCCceEEEecCCchhhhhhhHhhhcCCcccccccccCCCCc
Q 015124 227 IFQEVYEA----NWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGK 302 (413)
Q Consensus 227 ~~~eva~~----eYp~~~~~~~I~~~~~~VD~~a~~Lv~~P~~FViv~~NlfGDILSDlaa~l~GslGlapSanig~~~~ 302 (413)
+|+||+++ +|| +.+|++++++||++||+||++|++|||||+|||||||||++|+++|||||+||+|+|+++.
T Consensus 228 ~~~eva~~~~~~eyp----~~~I~~~~~lVDa~a~~lv~~P~~fViv~~NLfGDIlSDlaA~l~GslGlapSanig~~~~ 303 (410)
T PLN00103 228 IFQEVYEAQWKSKFE----AAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGK 303 (410)
T ss_pred HHHHHHHhhhhhhCC----CCceEEEEeEHHHHHHHHhcCCCCCEEEEcccchHHHHHHHHHhcCchhhhhccccCCCCC
Confidence 99999974 576 2369999999999999999999999999999999999999999999999999999998852
Q ss_pred eEEEccccccccccccc-cccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhh
Q 015124 303 TIEAEAAHGTVTRHYRV-HQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALII 381 (413)
Q Consensus 303 ~a~FEp~HGSAp~~~~~-diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~ 381 (413)
++||||+|||||++|+. ||||||+ |||+|+|||++|||+|||.++.++.+.++|++|++||.+|+++|.+|+||+...
T Consensus 304 ~~~FEp~HGSApd~~~~~diaGk~i-ANP~A~IlS~ammL~~l~~~~~~~g~~~~a~~i~~Av~~~l~~G~~T~Dl~~~~ 382 (410)
T PLN00103 304 TIEAEAAHGTVTRHYRVHQKGGETS-TNSIASIFAWSRGLAHRAKLDGNARLLDFTEKLEAACVGTVESGKMTKDLALLI 382 (410)
T ss_pred cEEEeCCCCcCcccchhhhhcCCCc-cChHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHcCCCCccccccc
Confidence 37999999999943333 4999999 999999999999999999887777789999999999999999999999994110
Q ss_pred cCCcCCCccccCHHHHHHHHHHHHHHHh
Q 015124 382 HGSKMTREHYLNTEEFIDAVADDLRARL 409 (413)
Q Consensus 382 ~G~~~~~~~~~sT~e~~daV~~~l~~~~ 409 (413)
+|+...+++.++|+||+|+|+++|+++|
T Consensus 383 ~gg~~~~~~~~~T~e~~daV~~~l~~~~ 410 (410)
T PLN00103 383 HGPKVSRDQYLNTEEFIDAVAEELKARL 410 (410)
T ss_pred CCCcccCCCCcCHHHHHHHHHHHHHhhC
Confidence 1221112234899999999999997654
No 13
>PRK09222 isocitrate dehydrogenase; Validated
Probab=100.00 E-value=6.3e-102 Score=797.81 Aligned_cols=335 Identities=22% Similarity=0.216 Sum_probs=308.4
Q ss_pred ccccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccC-CCCCHHHHHHHHhCCeeEEcccCCCcchhhH
Q 015124 8 VANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATD-DKVTVESAEATLKYNVAIKCATITPDEARVK 86 (413)
Q Consensus 8 m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g-~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~ 86 (413)
+.++|++|||||||||||++++++|.+.+++|+|+++++|.++|+++| +++|++++++|+++|++||||++||.+.
T Consensus 3 ~~~~I~vipGDGIGPEV~~a~~~VL~a~~~~i~~~~~~~G~~~~~~~g~~~lp~~~~~~i~~~da~LkG~i~tP~~~--- 79 (482)
T PRK09222 3 EKTPITVAYGDGIGPEIMEAVLKILEAAGAPLEIETIEIGEKVYKKGWTSGISPSAWESIRRTKVLLKAPITTPQGG--- 79 (482)
T ss_pred CcceEEEECCCcccHHHHHHHHHHHHhcCCceEEEEEcCCHHHHHhcCCCCCCHHHHHHHHHCCEEEEccccCCCcc---
Confidence 448999999999999999999999988899999999999999999987 6999999999999999999999999643
Q ss_pred HHHhhccCCCcchhhhhhcCceEEeeeeeccCCcccc-CCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCC
Q 015124 87 EFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLI-PGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKD 163 (413)
Q Consensus 87 ~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~-pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~ 163 (413)
+++|+|++|||+||||||+||| +++ ||+++| ++++|+||| ||||+|+|.++.
T Consensus 80 ------~~~s~~~~LRk~ldLYaNvRP~------r~~~pgv~~~-------------~~~iD~vIVRENtEG~Y~G~e~~ 134 (482)
T PRK09222 80 ------GYKSLNVTLRKTLGLYANVRPC------VSYHPFVETK-------------HPNLDVVIIRENEEDLYAGIEHR 134 (482)
T ss_pred ------CccchHHHHHHHcCCeEEeeeE------EecCCCCCCC-------------CCCcCEEEEEeccCCeeccceee
Confidence 5678899999999999999999 788 998876 369999999 899999998641
Q ss_pred cccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCC-CEEEEeCCCccccccHHHHHHHHHHHHhhccCccc
Q 015124 164 EKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFE 241 (413)
Q Consensus 164 ~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~ 241 (413)
..++++++ ++|||+++|||+|+||+||++|++ |||++||+|||+.|||||+++|+|||+ +||
T Consensus 135 -----------~~~~~~~~~k~iTr~~~eRI~r~AFe~A~~r~rkkVt~v~KaNVmk~tdglf~~v~~eva~-eyP---- 198 (482)
T PRK09222 135 -----------QTPDVYQCLKLISRPGSEKIIRYAFEYARANGRKKVTCLTKDNIMKLTDGLFHKVFDEIAK-EYP---- 198 (482)
T ss_pred -----------cCCCeeeEeeccCHHHHHHHHHHHHHHHHhcCCCeEEEEECCCcccccchHHHHHHHHHHh-hCC----
Confidence 11468899 999999999999999999999975 799999999999999999999999997 899
Q ss_pred cCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccccccccccccc
Q 015124 242 AAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVH 320 (413)
Q Consensus 242 ~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~d 320 (413)
+|+++|++||++||+||++|++| ||||+|||||||||++|+++||+||+||+|||++ ++||||+||||| |
T Consensus 199 --dI~~~~~~VDa~a~~Lv~~P~~FDVIVt~NLfGDILSDlaa~l~GslGlapSanig~~--~amFEpvHGSAP-----d 269 (482)
T PRK09222 199 --DIEAEHYIVDIGAARLATNPENFDVIVTPNLYGDILSDIAAEISGSVGLAGSANIGEE--YAMFEAVHGSAP-----D 269 (482)
T ss_pred --CceEeeeeHHHHHHHHhcCcccceEEEEcccccchhhHHHHHhcCCcccccceecCCC--ceeeECCCCCch-----h
Confidence 99999999999999999999999 9999999999999999999999999999999988 599999999999 9
Q ss_pred ccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHHHH
Q 015124 321 QKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDA 400 (413)
Q Consensus 321 iaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~da 400 (413)
|||||+ |||+|||||++|||+|||+ .++|++|++||.+|+++|++|+||+ |.. .....++|+||+|+
T Consensus 270 IAGk~i-ANP~a~IlSaamML~hlG~-------~~~A~~I~~Av~~tl~~G~~T~Dl~----g~~-~~~~~~~T~e~~~a 336 (482)
T PRK09222 270 IAGKNI-ANPSGLLNAAVMMLVHIGQ-------FDIAELIENAWLKTLEDGIHTADIY----NEG-VSKKKVGTKEFAEA 336 (482)
T ss_pred hcCCCc-cCcHHHHHHHHHHHHHcCC-------hHHHHHHHHHHHHHHHcCCCCcccC----CCC-CCCCCcCHHHHHHH
Confidence 999999 9999999999999999997 6899999999999999999999996 310 00125899999999
Q ss_pred HHHHHHHH
Q 015124 401 VADDLRAR 408 (413)
Q Consensus 401 V~~~l~~~ 408 (413)
|+++|.++
T Consensus 337 Vi~~l~~~ 344 (482)
T PRK09222 337 VIENLGQK 344 (482)
T ss_pred HHHHHhcC
Confidence 99999654
No 14
>PRK00772 3-isopropylmalate dehydrogenase; Provisional
Probab=100.00 E-value=1e-101 Score=776.96 Aligned_cols=341 Identities=20% Similarity=0.199 Sum_probs=307.3
Q ss_pred cccEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchh
Q 015124 9 ANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR 84 (413)
Q Consensus 9 ~~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~ 84 (413)
.++|++|||||||||||++++++|.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+..
T Consensus 2 ~~~I~vipGDGIGpEV~~aa~~vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~da~L~Gav~~p~~~~ 81 (358)
T PRK00772 2 TYKIAVLPGDGIGPEVMAEAVKVLDAVAEKFGFDFEFEEALVGGAAIDAHGVPLPEETLEACRAADAVLLGAVGGPKWDN 81 (358)
T ss_pred ceEEEEECCCcccHHHHHHHHHHHHHHHhhcCCceEEEEecCcHHHHHHHCCCCCHHHHHHHHHCCEEEECccCCCCCCC
Confidence 478999999999999999999988643 7899999999999999999999999999999999999999999996431
Q ss_pred hHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcc--hhhhHHHHHhhhcccCCcceEEe--eeceeeecC
Q 015124 85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLL--VINIEQLIQLFKDLANLNWCLVI--SLSVFDVPE 160 (413)
Q Consensus 85 ~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~--pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~ 160 (413)
++. ..+++.| |++||++||||+|+||| |++||+++ |++.. .++++|+||| ||||+|+|.
T Consensus 82 ~~~--~~~~~~~-~~~LR~~ldlyanvRP~------r~~pg~~~~~plk~~--------~~~~iD~vivREntEG~Y~g~ 144 (358)
T PRK00772 82 LPP--DVRPERG-LLALRKELGLFANLRPA------KLYPGLADASPLKPE--------IVAGLDILIVRELTGGIYFGE 144 (358)
T ss_pred CCc--cCCChhh-HHHHHHHcCCeEEEeEe------ecCCCCCCcCCCccc--------ccCCccEEEEecccCCeecCC
Confidence 110 0123456 89999999999999999 88999885 76411 1358999999 899999998
Q ss_pred CCCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCc
Q 015124 161 GKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 239 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~ 239 (413)
++... ...+ .++|++ ++|||++++||+|+||+||++|+++||++||+|||+ ++|||+++|+||++ +||
T Consensus 145 ~~~~~------~~~~-~~~a~~~~~iTr~~~~Ri~r~Af~~A~~r~~~Vt~v~KaNvl~-~~glf~~~~~eva~-eyp-- 213 (358)
T PRK00772 145 PRGRE------GLGG-EERAFDTMVYTREEIERIARVAFELARKRRKKVTSVDKANVLE-SSRLWREVVTEVAK-EYP-- 213 (358)
T ss_pred ccccc------CCCC-ceeEEEEEEeeHHHHHHHHHHHHHHHHHcCCcEEEEECccccc-cchHHHHHHHHHHh-HCC--
Confidence 64210 0012 468999 999999999999999999999988999999999999 99999999999998 899
Q ss_pred cccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccccccccccc
Q 015124 240 FEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYR 318 (413)
Q Consensus 240 ~~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~ 318 (413)
+|++++++||++||+||++|++| ||||+|||||||||++|+++||+||+||+|||+++ ++||||+|||||
T Consensus 214 ----~i~~~~~~vDa~~~~lv~~P~~fDViv~~NlfGDIlSDlaa~l~GglGl~psanig~~~-~a~FEp~HGSAp---- 284 (358)
T PRK00772 214 ----DVELSHMYVDNAAMQLVRNPKQFDVIVTENLFGDILSDEAAMLTGSLGMLPSASLGESG-PGLYEPIHGSAP---- 284 (358)
T ss_pred ----CceEEEEeHHHHHHHHhhCcccCeEEeecCcccccccHHHHHhcCCCCCCcceEeCCCC-ceeeecCCCchh----
Confidence 99999999999999999999999 99999999999999999999999999999999886 699999999999
Q ss_pred ccccCCCCccChHHHHHHHHHHHHH-hcccCCchhhHHHHHHHHHHHHHHHhcCCCCcch---hhhhcCCcCCCccccCH
Q 015124 319 VHQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDL---ALIIHGSKMTREHYLNT 394 (413)
Q Consensus 319 ~diaGk~i~ANP~A~IlS~ammL~~-lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dl---g~~~~G~~~~~~~~~sT 394 (413)
||||||+ |||+|+|||++|||+| ||+ .++|++|++||.+++++|++|+|| | | .+||
T Consensus 285 -diAGk~~-aNP~a~Ils~ammL~~~lg~-------~~~a~~i~~Av~~~l~~g~~T~Dl~~~g----g-------~~~T 344 (358)
T PRK00772 285 -DIAGKGI-ANPIATILSAAMMLRYSLGL-------EEAADAIEAAVEKVLAQGYRTADIAEGG----G-------KVST 344 (358)
T ss_pred -hhcCCCC-cCCHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHcCCcCcccccCC----C-------CcCH
Confidence 9999999 9999999999999999 996 689999999999999999999999 5 5 7999
Q ss_pred HHHHHHHHHHHH
Q 015124 395 EEFIDAVADDLR 406 (413)
Q Consensus 395 ~e~~daV~~~l~ 406 (413)
+||+|+|+++|.
T Consensus 345 ~e~~~av~~~l~ 356 (358)
T PRK00772 345 SEMGDAILAALA 356 (358)
T ss_pred HHHHHHHHHHhh
Confidence 999999999985
No 15
>PRK03437 3-isopropylmalate dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-101 Score=773.04 Aligned_cols=330 Identities=18% Similarity=0.158 Sum_probs=300.4
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcC---CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhhH
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFP---FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVK 86 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~---~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~ 86 (413)
++|++|||||||||||+++++++.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|....
T Consensus 5 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~da~L~Gavg~p~~~~-- 82 (344)
T PRK03437 5 MKLAVIPGDGIGPEVVAEALKVLDAVAAGGPGVETTEYDLGARRYLRTGETLPDSVLAELRQHDAILLGAIGDPSVPS-- 82 (344)
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHHhcCCceEEEEEeCCHHHHHHHCCcCCHHHHHHHHHCCEEEEeecCCCCCCC--
Confidence 68999999999999999999998744 8999999999999999999999999999999999999999999995320
Q ss_pred HHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCCc
Q 015124 87 EFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKDE 164 (413)
Q Consensus 87 ~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~~ 164 (413)
..++.|+++.|||+||||+|+||+ +++||+++|++ + ++++|++|| ||||+|+|.++..
T Consensus 83 ----~~~~~~~~~~LRk~ldLyaNvRP~------r~~pg~~sp~k--~--------~~~iD~vivREnteG~Y~g~~~~~ 142 (344)
T PRK03437 83 ----GVLERGLLLKLRFALDHYVNLRPS------KLYPGVTSPLA--G--------PGDIDFVVVREGTEGPYTGNGGAL 142 (344)
T ss_pred ----CCcccchHHHHHHHcCCeEEEEEe------ecCCCCCCcCC--C--------CCCCCEEEEEECCCccccCCcccc
Confidence 124677789999999999999999 88999998874 1 368999999 8999999986421
Q ss_pred ccceeeecccC-CCceEEE-eecChHHHHHHHHHHHHHHHhCC-CCEEEEeCCCccccccHHHHHHHHHHHHhhccCccc
Q 015124 165 KTELEVYNFTG-EGGVALS-MYNTDESIRAFAEASMNTAYQKK-WPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFE 241 (413)
Q Consensus 165 ~~~~~~~~~~~-~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~-~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~ 241 (413)
. .+ .+++|++ ++|||++++||+|+||+||++|+ ++||+|||+|||+.|+|||+++|+||++ +||
T Consensus 143 ------~--~~~~~~~a~~~~~~Tr~~~~RIa~~AF~~A~~r~~k~Vt~v~KaNvl~~t~glf~~~~~eva~-~yp---- 209 (344)
T PRK03437 143 ------R--VGTPHEVATEVSVNTAFGVERVVRDAFERAQKRPRKHLTLVHKTNVLTFAGDLWQRTVDEVAA-EYP---- 209 (344)
T ss_pred ------c--CCCcceeEEEEEEecHHHHHHHHHHHHHHHHhCCCCeEEEEECCccccccchHHHHHHHHHHh-hCC----
Confidence 0 11 1468999 99999999999999999999995 5699999999999999999999999997 899
Q ss_pred cCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCc-eEEEccccccccccccc
Q 015124 242 AAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGK-TIEAEAAHGTVTRHYRV 319 (413)
Q Consensus 242 ~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~-~a~FEp~HGSAp~~~~~ 319 (413)
+|+++++|||++|||||++|++| ||||+|||||||||++|+++||+|++||+|+|+++. ++||||+|||||
T Consensus 210 --dV~~~~~~vDa~~~~Lv~~P~~fDVIVt~NlfGDILSDlaa~l~GglGl~pSanig~~g~~~a~FEp~HGSAP----- 282 (344)
T PRK03437 210 --DVTVDYQHVDAATIFMVTDPSRFDVIVTDNLFGDIITDLAAAVTGGIGLAASGNINPTGTNPSMFEPVHGSAP----- 282 (344)
T ss_pred --CceEeehhHHHHHHHHhcCcccCcEEEEcccchhhhhHHHHHhcCCccccceeeecCCCCcceeEecCCCCch-----
Confidence 99999999999999999999999 999999999999999999999999999999997652 499999999999
Q ss_pred cccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHHH
Q 015124 320 HQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFID 399 (413)
Q Consensus 320 diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~d 399 (413)
||||||+ |||+|||||++|||+|||. .++|++|++||.+++++| +| | .+||+||+|
T Consensus 283 diAGk~i-ANP~a~IlS~amML~~lg~-------~~~a~~I~~Av~~~l~~g-----~g----g-------~~~T~e~~~ 338 (344)
T PRK03437 283 DIAGQGI-ADPTAAILSVALLLDHLGE-------EDAAARIEAAVEADLAER-----GK----M-------GRSTAEVGD 338 (344)
T ss_pred hhcCCCc-cChHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHhc-----CC----C-------CcCHHHHHH
Confidence 9999999 9999999999999999996 689999999999999998 45 5 689999999
Q ss_pred HHHHHH
Q 015124 400 AVADDL 405 (413)
Q Consensus 400 aV~~~l 405 (413)
+|+++|
T Consensus 339 ai~~~l 344 (344)
T PRK03437 339 RIAARL 344 (344)
T ss_pred HHHhhC
Confidence 999875
No 16
>PLN00123 isocitrate dehydrogenase (NAD+)
Probab=100.00 E-value=2.1e-101 Score=771.35 Aligned_cols=319 Identities=22% Similarity=0.202 Sum_probs=297.5
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhhHHHH
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFV 89 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~~~~ 89 (413)
++|++|||||||||||++++++|.+.+++|+|+++++|++ |.++|++++++|+++|++||||+++|.+.
T Consensus 31 ~~I~vipGDGIGpEV~~~a~~vl~a~~~~i~~~~~~~G~~-----~~~lp~~~l~~~~~~da~L~Gavg~p~~~------ 99 (360)
T PLN00123 31 RAVTLIPGDGIGPLVTGAVEQVMEAMHAPVYFERYEVHGD-----MKKVPEEVLESIRRNKVCLKGGLATPVGG------ 99 (360)
T ss_pred eEEEEECCCCccHHHHHHHHHHHHhCCCceEEEEEccCCC-----CccCCHHHHHHHHHCCEEEEccccCCCCc------
Confidence 6899999999999999999999988899999999999886 57899999999999999999999999643
Q ss_pred hhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCCcccc
Q 015124 90 LKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKDEKTE 167 (413)
Q Consensus 90 ~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~~~~~ 167 (413)
...|+++.||++||||+|+||| |++||+++| ++++|+||| ||||+|+|.++.
T Consensus 100 ---~~~s~~l~LR~~ldLyaNvRP~------k~~pg~~~~-------------~~~iD~viVREnteG~Y~g~~~~---- 153 (360)
T PLN00123 100 ---GVSSLNVQLRKELDLFASLVNC------FNLPGLPTR-------------HENVDIVVIRENTEGEYSGLEHE---- 153 (360)
T ss_pred ---CccchHHHHHHHcCCEEEEEEe------ecCCCCCCc-------------cCCCCEEEEEeCCCceeccceee----
Confidence 3567799999999999999999 889998876 368999999 899999998641
Q ss_pred eeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCC-CCEEEEeCCCccccccHHHHHHHHHHHHhhccCccccCCe
Q 015124 168 LEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKK-WPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGI 245 (413)
Q Consensus 168 ~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~-~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~I 245 (413)
.. ++++++ ++|||+++|||+|+||+||++|+ +|||++||+|||+.|+|||+++|+||++ +|| +|
T Consensus 154 ------~~-~g~~~~~~v~Tr~~~eRIar~AF~~A~~r~rkkVt~v~KaNvl~~t~glf~~~~~eva~-eyP------dV 219 (360)
T PLN00123 154 ------VV-PGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAK-KYP------GI 219 (360)
T ss_pred ------cC-CCceEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECCccccchhhHHHHHHHHHHh-hCC------Cc
Confidence 11 467899 99999999999999999999985 4799999999999999999999999998 899 99
Q ss_pred EEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccc--ccc--ccccccc
Q 015124 246 WYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAH--GTV--TRHYRVH 320 (413)
Q Consensus 246 ~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~H--GSA--p~~~~~d 320 (413)
+++|+|||++|||||++|++| ||||+|||||||||+||+|+||+||+||+|||++ ++||||+| ||| | |
T Consensus 220 ~~~~~~VDa~~~~Lv~~P~~fDViVt~NlfGDILSDlaa~l~GglGl~pSanig~~--~a~FEpvh~hGSA~~P-----d 292 (360)
T PLN00123 220 KYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAD--HAVFEQGASAGNVGNE-----K 292 (360)
T ss_pred eEeeeeHHHHHHHHhhCcccCcEEEEcCcccchhhhHHHHhcCCcCccceEeeCCC--ceEEEecccCCCcCCc-----c
Confidence 999999999999999999999 9999999999999999999999999999999988 59999976 999 9 9
Q ss_pred ccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC-CCCcchhhhhcCCcCCCccccCHHHHHH
Q 015124 321 QKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKMTREHYLNTEEFID 399 (413)
Q Consensus 321 iaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg~~~~G~~~~~~~~~sT~e~~d 399 (413)
|||||+ |||+|||||++|||+|||+ .++|++|++||.+++++| .+|+||| | .+||+||+|
T Consensus 293 IAGk~i-ANP~a~IlS~amML~~lG~-------~~~A~~I~~AV~~~l~~G~~~T~DlG----G-------~~sT~e~~~ 353 (360)
T PLN00123 293 LVEQKK-ANPVALLLSSAMMLRHLQF-------PSFADRLETAVKRVIAEGKYRTKDLG----G-------SSTTQEVVD 353 (360)
T ss_pred ccCCCc-cChHHHHHHHHHHHHHcCC-------hHHHHHHHHHHHHHHHcCCccCcccC----C-------CcCHHHHHH
Confidence 999999 9999999999999999996 689999999999999999 8999998 6 699999999
Q ss_pred HHHHHH
Q 015124 400 AVADDL 405 (413)
Q Consensus 400 aV~~~l 405 (413)
+|+++|
T Consensus 354 ai~~~l 359 (360)
T PLN00123 354 AVIANL 359 (360)
T ss_pred HHHHhh
Confidence 999987
No 17
>TIGR00169 leuB 3-isopropylmalate dehydrogenase. This model will not find all isopropylmalate dehydrogenases; the enzyme from Sulfolobus sp. strain 7 is more similar to mitochondrial NAD-dependent isocitrate dehydrogenases than to other known isopropylmalate dehydrogenases and was omitted to improve the specificity of the model. It scores below the cutoff and below some enzymes known not to be isopropylmalate dehydrogenase.
Probab=100.00 E-value=2.4e-101 Score=772.56 Aligned_cols=338 Identities=21% Similarity=0.180 Sum_probs=302.2
Q ss_pred cEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhhH
Q 015124 11 PIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVK 86 (413)
Q Consensus 11 ~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~ 86 (413)
+|++|||||||||||++++++|.+. +++|+|.++++|+++++++|+++|++++++|+++|++||||+++|.+...+
T Consensus 1 ~i~vipGDGIGpEV~~aa~~vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~da~l~G~v~~p~~~~~~ 80 (349)
T TIGR00169 1 KIAVLPGDGIGPEITAEALKVLKAVAERFGLKFEFEEHLIGGAAIDATGQPLPEETLKACKEADAVLLGAVGGPKWDNLP 80 (349)
T ss_pred CEEEECCCCccHHHHHHHHHHHHHHHhhcCCceEEEEEeCCHHHHHHHCCCCCHHHHHHHHHCCEEEECcccCCCCCCCC
Confidence 5899999999999999999988643 689999999999999999999999999999999999999999999643100
Q ss_pred HHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcc--hhhhHHHHHhhhcccCCcceEEe--eeceeeecCCC
Q 015124 87 EFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLL--VINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGK 162 (413)
Q Consensus 87 ~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~--pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~ 162 (413)
. ..+++.+ +++|||+||||+|+||| |++||+++ |++.. .++++|+||| ||||+|+|.++
T Consensus 81 ~--~~~~~~~-~~~LR~~ldlyanvRP~------r~~~g~~~~~p~~~~--------~~~~iD~vivREntEG~Y~g~~~ 143 (349)
T TIGR00169 81 R--DQRPEQG-LLKLRKSLDLFANLRPA------KVFPSLEDLSPLKEE--------IAKGVDFVVVRELTGGIYFGEPK 143 (349)
T ss_pred c--cccchhh-HHHHHHHcCCeEEEEEe------eccCCCCccCCCccc--------ccCCceEEEEeeccCCeecCCCc
Confidence 0 0012444 89999999999999999 88899874 65411 1368999999 89999999864
Q ss_pred CcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCccc
Q 015124 163 DEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFE 241 (413)
Q Consensus 163 ~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~ 241 (413)
... ..+.++++++ ++|||+++|||+|+||+||++|+++||+|||+|||+ ++|||+++|+||++ +||
T Consensus 144 ~~~-------~~~~~~~a~~~~~~Tr~~~eRI~r~AF~~A~~r~~~Vt~v~KaNvlk-t~glf~~~~~eva~-~yP---- 210 (349)
T TIGR00169 144 GRF-------GAGGEGEAWDTEVYTKPEIERIARVAFEMARKRRKKVTSVDKANVLE-SSRLWRKTVEEIAK-EYP---- 210 (349)
T ss_pred ccc-------CCCCcceEEEEEEeeHHHHHHHHHHHHHHHHHcCCcEEEEECCcccc-hhHHHHHHHHHHHh-hCC----
Confidence 210 0111468999 999999999999999999999988999999999999 99999999999998 899
Q ss_pred cCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccccccccccccc
Q 015124 242 AAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVH 320 (413)
Q Consensus 242 ~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~d 320 (413)
+|++++++||++||+||++|++| ||||+|||||||||++|+++||+||+||+|||+++ ++||||+||||| |
T Consensus 211 --~I~~~~~~vDa~~~~Lv~~P~~fDViv~~NlfGDILSDlaa~l~GglGlapSanig~~~-~a~FEp~HGSAP-----d 282 (349)
T TIGR00169 211 --DVELEHQYIDNAAMQLVKSPTQFDVVVTGNIFGDILSDEASVIPGSLGMLPSASLGSDG-FGLFEPVHGSAP-----D 282 (349)
T ss_pred --CceEEeeeHHHHHHHHHhCccCceEEEEcCcccchhhHHHHHhcCCCCCCceEEECCCC-CEEEECCCCChh-----H
Confidence 99999999999999999999999 99999999999999999999999999999999776 699999999999 9
Q ss_pred ccCCCCccChHHHHHHHHHHHHH-hcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHHH
Q 015124 321 QKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFID 399 (413)
Q Consensus 321 iaGk~i~ANP~A~IlS~ammL~~-lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~d 399 (413)
|||||+ |||+|||||++|||+| ||+ .++|++|++||.+|+++|++|+||| | .++|++|++
T Consensus 283 iAGk~i-ANP~a~IlS~amML~~~lg~-------~~~a~~i~~Av~~~l~~g~~T~Dlg----G-------~~~t~e~t~ 343 (349)
T TIGR00169 283 IAGKGI-ANPIAQILSAAMMLRYSFNL-------EEAADAIEAAVKKVLAEGYRTPDLG----S-------SATTEVGTA 343 (349)
T ss_pred hcCCCC-CChHHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHHHcCCCccccC----C-------CcchHHHHH
Confidence 999999 9999999999999999 786 7899999999999999999999997 6 689999999
Q ss_pred HHHHHH
Q 015124 400 AVADDL 405 (413)
Q Consensus 400 aV~~~l 405 (413)
+|++.|
T Consensus 344 av~~~~ 349 (349)
T TIGR00169 344 EMGEEL 349 (349)
T ss_pred HHHhcC
Confidence 999753
No 18
>TIGR02924 ICDH_alpha isocitrate dehydrogenase. This family of mainly alphaproteobacterial enzymes is a member of the isocitrate/isopropylmalate dehydrogenase superfamily described by pfam00180. Every member of the seed of this model appears to have a TCA cycle lacking only a determined isocitrate dehydrogenase. The precise identity of the cofactor (NADH -- 1.1.1.41 vs. NADPH -- 1.1.1.42) is unclear.
Probab=100.00 E-value=1.7e-101 Score=792.12 Aligned_cols=331 Identities=22% Similarity=0.196 Sum_probs=304.1
Q ss_pred cEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccC-CCCCHHHHHHHHhCCeeEEcccCCCcchhhHHHH
Q 015124 11 PIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATD-DKVTVESAEATLKYNVAIKCATITPDEARVKEFV 89 (413)
Q Consensus 11 ~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g-~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~~~~ 89 (413)
+|++|||||||||||++++++|.+.+++|+|+++++|+++|+++| +++|++++++|+++|++||||+++|.+.
T Consensus 2 ~I~vipGDGIGPEV~~aa~~VL~a~~~~i~~~~~~~G~~~~~~~gg~~lpdetl~~i~~~da~LkG~i~tp~~~------ 75 (473)
T TIGR02924 2 PITVAYGDGIGPEIMEAVLLILKEAEAPIDIETIEIGEKVYKKGWPSGISPSSWESIRRTKVLLKAPITTPQGG------ 75 (473)
T ss_pred eEEEEcCCcccHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHhhCCCCCCHHHHHHHHHCCEEEECcccCCCcc------
Confidence 699999999999999999999988889999999999999999995 8999999999999999999999999653
Q ss_pred hhccCCCcchhhhhhcCceEEeeeeeccCCcccc-CCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCCccc
Q 015124 90 LKQMWKSPNGTIRNILNGTVFREPIICKNVPRLI-PGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKDEKT 166 (413)
Q Consensus 90 ~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~-pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~~~~ 166 (413)
+.+|+|++|||.||||+|+||| +++ |++++| ++++|+||| ||||+|+|.++.
T Consensus 76 ---~~~s~~~~LRk~ldLYANvRPv------~~~~p~~~~~-------------~~~vDiVIVRENtEGlY~G~e~~--- 130 (473)
T TIGR02924 76 ---GHKSLNVTLRKTLGLYANIRPC------VSYHPFIETK-------------SPNLNIVIVRENEEDLYTGIEYR--- 130 (473)
T ss_pred ---CcccHHHHHHHHcCCeEEEEEe------eccCCCCCCc-------------cCCcCEEEEEeccCceecCceee---
Confidence 4678899999999999999999 777 777654 369999999 899999998642
Q ss_pred ceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCC-CEEEEeCCCccccccHHHHHHHHHHHHhhccCccccCC
Q 015124 167 ELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAG 244 (413)
Q Consensus 167 ~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~ 244 (413)
...+++++ ++|||+++|||+|+||+||++|++ |||++||+|||+.|||||+++|+|||+ +|| +
T Consensus 131 --------~~~~~~~~~kviTr~g~eRI~r~AFe~A~~r~rkkVT~v~KaNVmk~tdglf~e~~~eva~-eyP------d 195 (473)
T TIGR02924 131 --------QTPDTYECTKLITRSGSEKICRYAFEYARKHNRKKVTCLTKDNIMKMTDGIFHKIFDKIAA-EYP------D 195 (473)
T ss_pred --------ccCChheEeEecCHHHHHHHHHHHHHHHHhcCCCeEEEEECCccccccchhHHHHHHHHHh-hCC------C
Confidence 11457889 999999999999999999999964 799999999999999999999999997 899 9
Q ss_pred eEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccC
Q 015124 245 IWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKG 323 (413)
Q Consensus 245 I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaG 323 (413)
|+++|++||++||+||++|++| ||||+|||||||||++|+++||+||+||+|||++ ++||||+||||| ||||
T Consensus 196 I~~e~~~VDa~a~~Lv~~P~~FDVIVt~NLfGDILSDlaA~l~GslGlapSaNiG~~--~amFEpvHGSAP-----dIAG 268 (473)
T TIGR02924 196 IESEHYIVDIGMARLATNPENFDVIVTPNLYGDILSDVAAEISGSVGLAGSANIGEE--YAMFEAVHGSAP-----DIAG 268 (473)
T ss_pred cEEeeHHHHHHHHHHhhCcccceEEEEccccchhhhHHHHHhcCCcCcccceecCCC--cceeecCCCchh-----hhCC
Confidence 9999999999999999999999 9999999999999999999999999999999988 599999999999 9999
Q ss_pred CCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHHHHHHH
Q 015124 324 GETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVAD 403 (413)
Q Consensus 324 k~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~ 403 (413)
||+ |||+|||||++|||+|||+ .++|++|++||.+|+++|++|+||+.. | .+...++|+||+|+|++
T Consensus 269 k~i-ANP~a~IlSaamML~hLG~-------~~~A~~I~~AV~~vl~~G~~T~Dl~~~--~---~~gg~~sT~e~~daVi~ 335 (473)
T TIGR02924 269 QNI-ANPSGLLNAAIQMLVHIGQ-------SDIAQLIYNAWLKTLEDGVHTADIYNE--K---TSKQKVGTKEFAEAVTA 335 (473)
T ss_pred CCc-cChHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHcCCcCcccccc--c---cCCCCcCHHHHHHHHHH
Confidence 999 9999999999999999997 689999999999999999999999511 1 00026899999999999
Q ss_pred HHHH
Q 015124 404 DLRA 407 (413)
Q Consensus 404 ~l~~ 407 (413)
+|.+
T Consensus 336 ~l~~ 339 (473)
T TIGR02924 336 NLGK 339 (473)
T ss_pred Hhcc
Confidence 9965
No 19
>PRK06451 isocitrate dehydrogenase; Validated
Probab=100.00 E-value=6.1e-101 Score=781.30 Aligned_cols=348 Identities=20% Similarity=0.217 Sum_probs=307.4
Q ss_pred EEEECCCCccHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchh
Q 015124 12 IVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR 84 (413)
Q Consensus 12 I~vi~GDGIGpEv~~~~~~v~~~~-------~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~ 84 (413)
|++|||||||||||++++++|.+. +++|+|+++++|+++|+++|+++|++++++|+++|++||||++||...
T Consensus 26 I~vipGDGIGpEV~~aa~~Vl~a~~~~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~etl~~ik~~daiL~GavgtP~~~- 104 (412)
T PRK06451 26 ILYVEGDGIGPEITHAAMKVINKAVEKAYGSDREIKWVEVLAGDKAEKLTGNRFPKESEELIEKYRVLLKGPLETPIGK- 104 (412)
T ss_pred EEEecCCcccHHHHHHHHHHHHHHHHhccCCCCceEEEEEcCCHHHHHHhCCcCCHHHHHHHHHCCEEEECcccCCCCc-
Confidence 999999999999999999988632 258999999999999999999999999999999999999999999532
Q ss_pred hHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCC
Q 015124 85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGK 162 (413)
Q Consensus 85 ~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~ 162 (413)
.|.|+|+.||++||||+|+||| +++||+++|++ + .+++|+||| ||||+|+|.++
T Consensus 105 --------~~~s~~l~LRk~ldLyaNvRPv------k~~pgl~sp~~--~--------~~~iD~vIvREnTeG~Y~g~~~ 160 (412)
T PRK06451 105 --------GWKSINVAIRLMLDLYANIRPV------KYIPGIESPLK--N--------PEKIDLIIFRENTDDLYRGIEY 160 (412)
T ss_pred --------CCcChhHHHHHHcCCeEeecee------ecCCCCCCccc--C--------cCCccEEEEEeccCCeeecccc
Confidence 4788999999999999999999 88999998874 1 368999999 89999999864
Q ss_pred Cccc--ceeeecc-----c-C-CCceEEE-eecChHHHHHHHHHHHHHHHhCC-CCEEEEeCCCccccccHHHHHHHHHH
Q 015124 163 DEKT--ELEVYNF-----T-G-EGGVALS-MYNTDESIRAFAEASMNTAYQKK-WPLYLSTKNTILKKYDGRFKDIFQEV 231 (413)
Q Consensus 163 ~~~~--~~~~~~~-----~-~-~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~-~~Vt~v~KaNVl~~t~glf~~~~~ev 231 (413)
.... .+..+++ . + ..+++++ ++|||++++||+|+||+||++|+ +|||+|||+|||+.|+|+|+++|+||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~t~~~~eRIar~AF~~A~~r~~kkVt~v~KaNVlk~t~glf~~~~~ev 240 (412)
T PRK06451 161 PYDSEEAKKIRDFLRKELGVEVEDDTGIGIKLISKFKTQRIARMAIKYAIDHKRKKVTIMHKGNVMKYTEGAFREWAYEV 240 (412)
T ss_pred ccccccccccccccccccccccccceecceeeeeHHHHHHHHHHHHHHHHhcCCCcEEEEECCCccccchhhHHHHHHHH
Confidence 2100 0000000 0 1 1356889 99999999999999999999996 47999999999999999999999999
Q ss_pred HHhhccC--------------ccccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccc
Q 015124 232 YEANWKS--------------KFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVL 296 (413)
Q Consensus 232 a~~eYp~--------------~~~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSan 296 (413)
++++||+ +|...+|+++|+|||++|||||++|++| ||||+|||||||||++|+++||+||+||+|
T Consensus 241 a~~eypd~~~~~~~~~~~y~~~~~~~~I~~~~~~vDa~~~~Lv~~P~~FDVivt~NlfGDILSDlaa~l~GglGl~pSan 320 (412)
T PRK06451 241 ALKEFRDYVVTEEEVTKNYNGVPPSGKVIINDRIADNMFQQIIIRPDEYDIILAPNVNGDYISDAAGALVGNIGMLGGAN 320 (412)
T ss_pred HHHhCCcccccccchhhccccccccCceEEEeeeHHHHHHHHhcCcccCcEEEEcCcccchhhHHHHHhcCchhhcceee
Confidence 9757985 5666679999999999999999999999 999999999999999999999999999999
Q ss_pred cCCCCceEEEccccccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcc
Q 015124 297 VCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKD 376 (413)
Q Consensus 297 ig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~D 376 (413)
+|+++ +||||+||||| ||||||+ |||+|||||++|||+|||+ .++|++|++||.+++++|++|+|
T Consensus 321 ig~~~--alFEpvHGSAP-----diAGk~i-ANP~a~IlS~amML~~lg~-------~~~A~~I~~Av~~vl~~G~~T~D 385 (412)
T PRK06451 321 IGDTG--GMFEAIHGTAP-----KYAGKNV-ANPTGIIKGGELMLRFMGW-------DKAADLIDKAIMESIKQKKVTQD 385 (412)
T ss_pred eCCCC--ceeECCCCCcc-----ccCCCCC-cCcHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHcCCcCcc
Confidence 99884 99999999999 9999999 9999999999999999996 68999999999999999999999
Q ss_pred hhhhhcCCcCCCccccCHHHHHHHHHHHH
Q 015124 377 LALIIHGSKMTREHYLNTEEFIDAVADDL 405 (413)
Q Consensus 377 lg~~~~G~~~~~~~~~sT~e~~daV~~~l 405 (413)
|+...+| +.++|+||+|+|+++|
T Consensus 386 l~~~~gg------~~~~T~e~~daI~~~l 408 (412)
T PRK06451 386 LARFMGV------RALSTTEYTDELISII 408 (412)
T ss_pred ccccCCC------CccCHHHHHHHHHHHH
Confidence 9510003 2489999999999998
No 20
>TIGR00175 mito_nad_idh isocitrate dehydrogenase, NAD-dependent, mitochondrial type. The NADP-dependent IDH of Thermus aquaticus thermophilus strain HB8 resembles these NAD-dependent IDH, except for the residues involved in cofactor specificity, much more closely than it resembles other prokaryotic NADP-dependent IDH, including that of Thermus aquaticus strain YT1.
Probab=100.00 E-value=2.8e-100 Score=761.88 Aligned_cols=323 Identities=20% Similarity=0.215 Sum_probs=299.8
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhhHHHH
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFV 89 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~~~~ 89 (413)
++|++|||||||||||++++++|.+.+++|+|+++++|++ +.+|+++|++++++|+++|++||||+++|...
T Consensus 4 ~~i~vlpGDGIGpEv~~~a~~vl~~~~~~i~~~~~~~G~~--~~~g~~lp~~~l~~~~~~da~l~Gav~~p~~~------ 75 (333)
T TIGR00175 4 YTVTLIPGDGIGPEISGSVKKIFRAANVPIEFEEIDVSPQ--TDGKTEIPDEAVESIKRNKVALKGPLETPIGK------ 75 (333)
T ss_pred EEEEEECCCcccHHHHHHHHHHHHhCCCceEEEEEecChh--hccCCcCCHHHHHHHHHCCEEEEcccCCcccc------
Confidence 5799999999999999999999988899999999999986 56899999999999999999999999998532
Q ss_pred hhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCCcccc
Q 015124 90 LKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKDEKTE 167 (413)
Q Consensus 90 ~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~~~~~ 167 (413)
.+++|++++||++||||+|+||| |++||+++| ++++||+|| ||||+|+|.++.
T Consensus 76 --~~~~s~~~~lR~~ldlyanvRP~------k~~pg~~~~-------------~~~iD~vivREnteG~Y~g~~~~---- 130 (333)
T TIGR00175 76 --GGHRSLNVALRKELDLYANVVHC------KSLPGFKTR-------------HEDVDIVIIRENTEGEYSGLEHE---- 130 (333)
T ss_pred --ccccchhHHHHHHcCCEEEeEEe------cCCCCCCCC-------------CCCcCEEEEEEeCCCcccceeEe----
Confidence 13788899999999999999999 889998876 358999999 899999998531
Q ss_pred eeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCC-CEEEEeCCCccccccHHHHHHHHHHHHhhccCccccCCe
Q 015124 168 LEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGI 245 (413)
Q Consensus 168 ~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~I 245 (413)
.. ++++++ ++|||++++||+|+||+||++|++ |||++||+|||+.|||||+++|+||++ +|| +|
T Consensus 131 ------~~-~~~~~~~~~~Tr~~~eRi~r~Af~~A~~r~~k~Vt~v~KaNvl~~t~glf~~~~~eva~-~yp------~v 196 (333)
T TIGR00175 131 ------SV-PGVVESLKVITRDKSERIARYAFEYARKNGRKKVTAVHKANIMKLADGLFLNVCREVAK-EYP------DI 196 (333)
T ss_pred ------cc-CCeEEEEEecCHHHHHHHHHHHHHHHHhcCCCeEEEEECCccchhhHHHHHHHHHHHHH-HCC------CC
Confidence 11 468899 999999999999999999999975 599999999999999999999999998 799 99
Q ss_pred EEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccc-cccccccccccccC
Q 015124 246 WYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAA-HGTVTRHYRVHQKG 323 (413)
Q Consensus 246 ~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~-HGSAp~~~~~diaG 323 (413)
+++|+|||++||+||++|++| ||||+|||||||||++|+++||+||+||+|+|++ ++||||+ ||||| ||||
T Consensus 197 ~~~~~~vDa~~~~lv~~P~~fdViVt~NlfGDILSDlaa~l~GslGl~pSanig~~--~a~fEp~~hGSAp-----diaG 269 (333)
T TIGR00175 197 TFESMIVDNTCMQLVSRPSQFDVMVMPNLYGNILSNLGAGLVGGPGLVPGANIGRD--YAVFEPGVRHTGP-----DIAG 269 (333)
T ss_pred eeeeeeHHHHHHHHhcCcccccEEEEccccchhhhHHHHHhcCCcccCceeEEcCC--CceEeccCCCCch-----hhCC
Confidence 999999999999999999999 9999999999999999999999999999999987 4999995 59999 9999
Q ss_pred CCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC-CCCcchhhhhcCCcCCCccccCHHHHHHHHH
Q 015124 324 GETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKMTREHYLNTEEFIDAVA 402 (413)
Q Consensus 324 k~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~ 402 (413)
||+ |||+|+|||++|||+|||. .++|++|++||.+++++| .+|+||| | .+||+||+|+|+
T Consensus 270 k~i-aNP~a~Ils~ammL~~lG~-------~~~a~~i~~Av~~~l~~G~~~T~DlG----G-------~~~T~e~~~ai~ 330 (333)
T TIGR00175 270 QNI-ANPTALILSSVMMLNHLGL-------KEHADRIQKAVLSTIAEGKNRTKDLG----G-------TATTSDFTEAVI 330 (333)
T ss_pred CCc-cChHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHcCCccChhcC----C-------CcCHHHHHHHHH
Confidence 999 9999999999999999996 689999999999999999 8999997 6 699999999999
Q ss_pred HHH
Q 015124 403 DDL 405 (413)
Q Consensus 403 ~~l 405 (413)
++|
T Consensus 331 ~~l 333 (333)
T TIGR00175 331 KRL 333 (333)
T ss_pred hhC
Confidence 875
No 21
>PRK07006 isocitrate dehydrogenase; Reviewed
Probab=100.00 E-value=2.1e-99 Score=770.96 Aligned_cols=348 Identities=20% Similarity=0.208 Sum_probs=303.9
Q ss_pred EEEECCCCccHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhccCC--CCCHHHHHHHHhCCeeEEcccCCCcc
Q 015124 12 IVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDD--KVTVESAEATLKYNVAIKCATITPDE 82 (413)
Q Consensus 12 I~vi~GDGIGpEv~~~~~~v~~~~-------~~~i~~~~~~~g~~~~~~~g~--~lp~~~~~ai~~~~v~lkg~~~~p~~ 82 (413)
|++|||||||||||++++++|.+. +++|+|+++++|+++++++|+ ++|++++++|+++|++||||++||..
T Consensus 22 I~vipGDGIGpEV~~aa~~vl~a~~~~~~~~~~~i~~~~~~~G~~~~~~~G~~~~lp~~tl~~~~~~da~l~G~i~tp~~ 101 (409)
T PRK07006 22 IPFIEGDGIGPDITPAMLKVVDAAVEKAYKGERKISWMEIYAGEKATKVYGEDVWLPEETLDLIREYRVAIKGPLTTPVG 101 (409)
T ss_pred EEEeCCCcccHHHHHHHHHHHHHHHHhccCCCCceEEEEEecCHHHHHhhCCcCCCCHHHHHHHHHCCEEEECcccCCCC
Confidence 999999999999999999988632 258999999999999999999 99999999999999999999999953
Q ss_pred hhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecC
Q 015124 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPE 160 (413)
Q Consensus 83 ~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~ 160 (413)
. ++.|+|+.||++||||+|+||| +++||+++|++ + .+++|+||| ||||+|+|.
T Consensus 102 ~---------~~~s~~l~LR~~ldLyaNvRPv------k~~pgl~~plk--~--------~~~iD~vIvREnteG~Y~g~ 156 (409)
T PRK07006 102 G---------GIRSLNVALRQELDLYVCLRPV------RYFKGVPSPVK--R--------PEDTDMVIFRENSEDIYAGI 156 (409)
T ss_pred c---------CccChHHHHHHHcCCEEEEEEE------ecCCCCCCCCC--C--------CCCCCEEEEEeccCCeeccc
Confidence 2 4668899999999999999999 88899998874 1 368999999 899999998
Q ss_pred CCCccc--ceeeeccc----C------CCceEEE-eecChHHHHHHHHHHHHHHHhCCC-CEEEEeCCCccccccHHHHH
Q 015124 161 GKDEKT--ELEVYNFT----G------EGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKD 226 (413)
Q Consensus 161 ~~~~~~--~~~~~~~~----~------~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNVl~~t~glf~~ 226 (413)
++.... .+.+..+. + ..+.|++ ++|||+++|||+|+||+||++|++ |||+|||+|||+.|||||++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~Tr~~~eRi~r~AFe~A~~r~rkkVt~v~KaNVlk~tdglf~~ 236 (409)
T PRK07006 157 EWKAGSAEAKKVIKFLQEEMGVKKIRFPETSGIGIKPVSEEGTERLVRAAIEYAIDNDRKSVTLVHKGNIMKFTEGAFKD 236 (409)
T ss_pred ccccCCcccceeeeccccccCcccccccccceEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECCCccccchHHHHH
Confidence 631100 00100000 1 1357889 999999999999999999999964 79999999999999999999
Q ss_pred HHHHHHHhhccCcccc-------------CCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccc
Q 015124 227 IFQEVYEANWKSKFEA-------------AGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLM 292 (413)
Q Consensus 227 ~~~eva~~eYp~~~~~-------------~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGla 292 (413)
++.|||+++||++|.. -+|++++++||+||||||++|++| ||||+|||||||||++|+++|||||+
T Consensus 237 ~~~eva~~ey~~~~~~~~~~~~~~~~~~~p~v~~~~~~vDa~~~~lv~~P~~fDVIvt~NlfGDILSDlaa~l~GglGla 316 (409)
T PRK07006 237 WGYQLAEEEFGDELIDGGPWDKIKNPETGKEIIVKDSIADAFLQQILLRPAEYDVIATMNLNGDYISDALAAQVGGIGIA 316 (409)
T ss_pred HHHHHHHHHhhhhhhccccccccccccCCCCceeehHHHHHHHHHHhhCcccCcEEEEcCcccchhhHHHHHhcCchhhc
Confidence 8889998679544433 289999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCceEEEccccccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCC
Q 015124 293 TSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGK 372 (413)
Q Consensus 293 pSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~ 372 (413)
||+|+|++ ++||||+||||| ||||||+ |||+|+|||++|||+|||+ .++|++|++||.+++++|+
T Consensus 317 pSanig~~--~a~FEpvHGSAP-----diAGk~i-ANP~a~IlS~amML~~lG~-------~~~A~~Ie~Av~~~l~~G~ 381 (409)
T PRK07006 317 PGANINDG--HAIFEATHGTAP-----KYAGLDK-VNPGSVILSAEMMLRHMGW-------TEAADLIIKSMEKTIASKT 381 (409)
T ss_pred ccceeCCC--ceEEECCCCcch-----hhCCCCC-cChHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHhcCC
Confidence 99999966 699999999999 9999999 9999999999999999996 6899999999999999999
Q ss_pred CCcchhhhh-cCCcCCCccccCHHHHHHHHHHHH
Q 015124 373 MTKDLALII-HGSKMTREHYLNTEEFIDAVADDL 405 (413)
Q Consensus 373 ~T~Dlg~~~-~G~~~~~~~~~sT~e~~daV~~~l 405 (413)
+|+||+... +| +.++|+||+|+|+++|
T Consensus 382 ~T~Dl~~~~~gg------~~~~T~e~~daI~~~l 409 (409)
T PRK07006 382 VTYDFARLMEGA------TEVKCSEFGDALIKNM 409 (409)
T ss_pred ccccccccCCCC------cccCHHHHHHHHHhhC
Confidence 999995110 03 2489999999999875
No 22
>TIGR02088 LEU3_arch isopropylmalate/isohomocitrate dehydrogenases. This family is closely related to both the LeuB genes found in TIGR00169 and the mitochondrial eukaryotic isocitrate dehydratases found in TIGR00175. All of these are included within the broader subfamily model, pfam00180.
Probab=100.00 E-value=5.1e-99 Score=748.67 Aligned_cols=318 Identities=22% Similarity=0.210 Sum_probs=299.3
Q ss_pred EEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhhHHHHhh
Q 015124 12 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLK 91 (413)
Q Consensus 12 I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~~~~~~ 91 (413)
|++|||||||||||+++++++.+.+++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+.
T Consensus 1 i~~ipGDGIGpEv~~~a~~vl~~~~~~i~~~~~~~G~~~~~~~G~~lp~~~l~~~~~~da~l~Gavg~p~~~-------- 72 (322)
T TIGR02088 1 VAVIPGDGIGPEVIEAAIRILNKLGLEIEFIEFEAGDEALKKYGSALPEDTLEEIRKADAILFGAVTTPANP-------- 72 (322)
T ss_pred CEEeCCCCccHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHHhCCCCCHHHHHHHHHCCEEEECcccCCCCC--------
Confidence 689999999999999999999877999999999999999999999999999999999999999999999753
Q ss_pred ccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCCccccee
Q 015124 92 QMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKDEKTELE 169 (413)
Q Consensus 92 ~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~~~~~~~ 169 (413)
++.|+|++|||+||||+|+||| |++||+++|. ..++|+||| ||||+|+|.+..
T Consensus 73 -~~~s~~~~LR~~ldlyanvRP~------r~~~g~~~~~------------~~~iD~vivREnteG~Y~g~~~~------ 127 (322)
T TIGR02088 73 -GYKSVIVTLRKELDLYANVRPA------KSLPGIPDLY------------PNGKDIVIVRENTEGLYAGFEFG------ 127 (322)
T ss_pred -CccChHHHHHHHcCCEEEEEEe------eccCCCCCCC------------CCCCCEEEEEeCcCCeeeccccc------
Confidence 4678899999999999999999 8899988662 138999999 899999998531
Q ss_pred eecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCccccCCeEEe
Q 015124 170 VYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYE 248 (413)
Q Consensus 170 ~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~I~~~ 248 (413)
. .+++++ +++||+++|||+|+||+||++|++|||++||+|||+.|+|||+++|+||++ +|| |+++
T Consensus 128 -----~-~~~a~~~~~~tr~~~eRi~r~AF~~A~~r~~~Vt~v~KaNvl~~t~glf~~~~~eva~-~yp-------v~~~ 193 (322)
T TIGR02088 128 -----F-SDRAIAIRVITREGSERIARFAFNLAKERNRKVTCVHKANVLKGTDGLFREVCREIAK-RYG-------VEYR 193 (322)
T ss_pred -----c-CcceEEEEEecHHHHHHHHHHHHHHHHHcCCcEEEEeCCcchhhhHHHHHHHHHHHHH-hCC-------eeee
Confidence 1 357899 999999999999999999999988999999999999999999999999997 799 9999
Q ss_pred eeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCCCc
Q 015124 249 HRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETS 327 (413)
Q Consensus 249 ~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ 327 (413)
|++||++||+||++|++| ||||+|||||||||++|+++||+||+||+|+|++ ++||||.||||| |||||++
T Consensus 194 ~~~vDa~~~~lv~~P~~fdViv~~NlfGDIlSDlaa~l~GglGl~pSanig~~--~a~fep~hGsa~-----diaG~~~- 265 (322)
T TIGR02088 194 DMYVDSAAMNLVKDPWRFDVIVTTNMFGDILSDLASALAGSLGLAPSANIGDR--KALFEPVHGSAP-----DIAGKGI- 265 (322)
T ss_pred eeeHHHHHHHHhhCCcCceEEEecCcccchhhHHHHhhcCCCCCCceeEEcCC--ceEEecCCCChh-----HhCCCCC-
Confidence 999999999999999999 9999999999999999999999999999999987 599999999999 9999999
Q ss_pred cChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHHHHHH
Q 015124 328 TNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVA 402 (413)
Q Consensus 328 ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~ 402 (413)
|||+|||+|++|||+|+|+ .++|++|++||.+++++|++|+||| | .+||+||+|+|+
T Consensus 266 aNp~a~i~A~~~~l~~~g~-------~~~a~~i~~Av~~~l~~g~~T~Dlg----G-------~~~T~e~~~av~ 322 (322)
T TIGR02088 266 ANPTAAILSVAMMLDYLGE-------LEKGKLVWEAVEYYIIEGKKTPDLG----G-------TAKTKEVGDEIA 322 (322)
T ss_pred CChHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHcCCCCcccC----C-------CcCHHHHHHHhC
Confidence 9999999999999999996 6899999999999999999999998 6 689999999985
No 23
>KOG0785 consensus Isocitrate dehydrogenase, alpha subunit [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-100 Score=732.93 Aligned_cols=324 Identities=24% Similarity=0.266 Sum_probs=304.9
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhhHHHH
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFV 89 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~~~~ 89 (413)
+++++||||||||||++++.+++.++.++|+|+.+|++...-..++..+|+++++++++..++||||+.||.++
T Consensus 36 ~~vtLIpGDGIGpEi~~av~kvf~aak~pIewd~~dv~~~~~~~~~~~ip~~~~esl~~nkvgLkGp~~tPi~k------ 109 (365)
T KOG0785|consen 36 ITVTLIPGDGIGPEISPAVKKVFEAAKVPIEWDFIDVTPIKGPFGGKAIPDEAVESLRKNKVGLKGPVATPIGK------ 109 (365)
T ss_pred eEEEEecCCCCCHHHHHHHHHHHHhcCCCcceeeeeccccccCCCCccCCHHHHHHHHhhcccccCcccCcccc------
Confidence 57899999999999999999999999999999999997655444788999999999999999999999999876
Q ss_pred hhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCCcccc
Q 015124 90 LKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKDEKTE 167 (413)
Q Consensus 90 ~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~~~~~ 167 (413)
+..|+|++|||+|+||||+||| ++++|+++| |+++|+|+| ||||+|+|+|+
T Consensus 110 ---gh~S~nl~LRK~f~LyANVRPc------~SieG~Kt~-------------Y~~vD~V~IRENTEgeYsgiEh----- 162 (365)
T KOG0785|consen 110 ---GHRSLNLALRKEFGLYANVRPC------KSIEGYKTP-------------YDDVDLVIIRENTEGEYSGIEH----- 162 (365)
T ss_pred ---ccccHHHHHHHHhchhccceec------ccccCCcCC-------------CCCceEEEEecCCcccccccee-----
Confidence 6789999999999999999999 899999876 789999999 89999999975
Q ss_pred eeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCC-CEEEEeCCCccccccHHHHHHHHHHHHhhccCccccCCe
Q 015124 168 LEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGI 245 (413)
Q Consensus 168 ~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~I 245 (413)
++. ++|+.+ +.||+.+++||++|||+||++++| +||++||+|||+.|||||+++|+|+++ +|| +|
T Consensus 163 -~vv-----pGVvqsiK~IT~~AS~Ria~~AF~yAr~~~R~~vtvvHKaNImr~tDGLFle~cre~a~-~y~------dI 229 (365)
T KOG0785|consen 163 -QVV-----PGVVQSIKLITEAASRRIAEYAFEYARQNGRKRVTVVHKANIMRMTDGLFLECCREVAK-KYP------DI 229 (365)
T ss_pred -ecc-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEEehhhhhhhcchHHHHHHHHHhh-hCC------cc
Confidence 221 569999 999999999999999999999976 799999999999999999999999987 799 99
Q ss_pred EEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCC
Q 015124 246 WYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGG 324 (413)
Q Consensus 246 ~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk 324 (413)
.++++|+|+||++|+++|+.| |+|+||||||||||+||+|+||||++||+||| ++ .++||++||||| |||||
T Consensus 230 ~~eE~~lDt~~l~lv~~P~~~DVlV~PNLYGDIlSD~~agLvGgLGltPS~NiG-~g-~~~~e~vHGsAP-----DIAGk 302 (365)
T KOG0785|consen 230 KFEEQYLDTCCLKLVRNPSCFDVLVMPNLYGDILSDLCAGLVGGLGLTPSANIG-DG-IVIFEAVHGSAP-----DIAGK 302 (365)
T ss_pred chhHHHHHHHHHHHhcCchhceEEeccchhHHHHHHHHHHhccCcccCCCcccC-CC-eeeeecccCCCc-----ccccC
Confidence 999999999999999999999 99999999999999999999999999999999 55 799999999999 99999
Q ss_pred CCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC-CCCcchhhhhcCCcCCCccccCHHHHHHHHHH
Q 015124 325 ETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKMTREHYLNTEEFIDAVAD 403 (413)
Q Consensus 325 ~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~ 403 (413)
++ |||+|++||++|||+|+|. .+.|+.|+.||.+++++| ++|+||| | .++|+||+++|++
T Consensus 303 dl-ANPtAlllS~vmMLrhm~l-------~~~A~~I~~Av~~ti~eg~~rT~DLG----G-------ka~~seft~aVc~ 363 (365)
T KOG0785|consen 303 DL-ANPTALLLSAVMMLRHMGL-------NDQADQIESAVFKTIAEGKIRTPDLG----G-------KATTSEFTDAVCD 363 (365)
T ss_pred Cc-CCcHHHHHHHHHHHHHcCc-------hhHHHHHHHHHHHHHhccCccCcccC----C-------CccchHHHHHHHh
Confidence 99 9999999999999999984 789999999999999999 8999998 7 7999999999998
Q ss_pred HH
Q 015124 404 DL 405 (413)
Q Consensus 404 ~l 405 (413)
+|
T Consensus 364 ~l 365 (365)
T KOG0785|consen 364 RL 365 (365)
T ss_pred cC
Confidence 75
No 24
>TIGR00183 prok_nadp_idh isocitrate dehydrogenase, NADP-dependent, prokaryotic type. Prokaryotic NADP-dependent isocitrate dehydrogenases resemble their NAD-dependent counterparts and 3-isopropylmalate dehydrogenase (an NAD-dependent enzyme) more closely than they resemble eukaryotic NADP-dependent isocitrate dehydrogenases.
Probab=100.00 E-value=9.7e-99 Score=768.89 Aligned_cols=349 Identities=20% Similarity=0.218 Sum_probs=303.9
Q ss_pred EEEECCCCccHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhccC--CCCCHHHHHHHHhCCeeEEcccCCCcc
Q 015124 12 IVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATD--DKVTVESAEATLKYNVAIKCATITPDE 82 (413)
Q Consensus 12 I~vi~GDGIGpEv~~~~~~v~~~~-------~~~i~~~~~~~g~~~~~~~g--~~lp~~~~~ai~~~~v~lkg~~~~p~~ 82 (413)
|++|||||||||||++++++|.+. +++|+|+++++|+++++++| +++|++++++|+++|++||||++||..
T Consensus 29 I~vipGDGIGpEv~~~a~~vl~a~~~~~~~~~~~i~~~~~~~G~~~~~~~G~~~~lp~~tl~~~~~~da~l~Ga~~tp~~ 108 (416)
T TIGR00183 29 IPYIEGDGIGVDVTPAAIKVLDAAVEKAYKGEKKIVWFEVYAGEKAYQLYGQDQWLPADTLDAIKEYRVAIKGPLTTPVG 108 (416)
T ss_pred EEEeCCCcccHHHHHHHHHHHHHHHHhccCCCCceEEEEEecCHHHHHHhCCCCCCCHHHHHHHHHCCEEEECcccCCCC
Confidence 999999999999999999988532 15899999999999999999 999999999999999999999999953
Q ss_pred hhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecC
Q 015124 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPE 160 (413)
Q Consensus 83 ~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~ 160 (413)
. ++.|+|+.||++||||+|+||| +++||+++|++ + .+++|++|| ||||+|+|.
T Consensus 109 ~---------~~~s~~l~LR~~ldLyaNvRP~------k~~pgl~s~~~--~--------~~~vDivIvREnteG~Y~g~ 163 (416)
T TIGR00183 109 G---------GIRSLNVALRQELDLYVCLRPV------RYYKGVPSPVK--H--------PEKVDMVIFRENTEDIYAGI 163 (416)
T ss_pred c---------cccCcHHHHHHHcCCEEEEeEe------ecCCCCCCcCC--C--------CCCCCEEEEEeCCCCccccc
Confidence 2 4678899999999999999999 88899998875 1 469999999 899999998
Q ss_pred CCCccc--ceeeecc--c--C------CCceEEE-eecChHHHHHHHHHHHHHHHhCC-CCEEEEeCCCccccccHHHHH
Q 015124 161 GKDEKT--ELEVYNF--T--G------EGGVALS-MYNTDESIRAFAEASMNTAYQKK-WPLYLSTKNTILKKYDGRFKD 226 (413)
Q Consensus 161 ~~~~~~--~~~~~~~--~--~------~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~-~~Vt~v~KaNVl~~t~glf~~ 226 (413)
++.... .++++.+ . + ..+++++ ++|||++++||+|+||+||++|+ ++||+|||+|||+.|||||++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~tr~~~~Riar~AFe~A~~r~rk~Vt~v~KaNvlk~tdglf~e 243 (416)
T TIGR00183 164 EWAEGSEEAKKLIRFLQNELGVKKIRFPEDSGIGIKPISEEGTKRLVRAAIEYAIENDRKSVTLVHKGNIMKFTEGAFRD 243 (416)
T ss_pred ccccCcccceeeecccccccCccccccccccEEEEEEecHHHHHHHHHHHHHHHHhcCCCeEEEEECCCccccchhhHHH
Confidence 632110 0110000 0 1 1457899 99999999999999999999995 579999999999999999999
Q ss_pred HHHHHHHhhccCccccC-------------CeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccc
Q 015124 227 IFQEVYEANWKSKFEAA-------------GIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLM 292 (413)
Q Consensus 227 ~~~eva~~eYp~~~~~~-------------~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGla 292 (413)
+|.||++++||.+|.+. +|+++|++||+||||||++|++| ||||+|||||||||++|+++||+||+
T Consensus 244 ~~~eva~~ey~~~~~~~~lw~~~~~p~~~p~I~~~~~~vDa~~~~lv~~P~~fDVivt~NlfGDILSDlaa~l~GslGla 323 (416)
T TIGR00183 244 WGYELAKKEFGAECITWGLWDKYKNPNPGKEIVIKDRIADAFLQQILTRPDEYDVIATMNLNGDYISDALAAQVGGIGIA 323 (416)
T ss_pred HHHHHHHHHHhHhhhhccccccccCcccCCceeEeehhHHHHHHHHhhCcccCcEEEEcCcccchhhHHHHHhcCchhhc
Confidence 98899985684433221 89999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCceEEEccccccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCC
Q 015124 293 TSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGK 372 (413)
Q Consensus 293 pSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~ 372 (413)
||+|||++ ++||||+||||| ||||||+ |||+|+|||++|||+|||+ .++|++|++||.+++++|+
T Consensus 324 pSanig~~--~alFEp~HGSAP-----diAGk~i-ANP~a~IlS~amML~~lg~-------~~~A~~Ie~AV~~~l~~G~ 388 (416)
T TIGR00183 324 PGANIGDE--IGIFEATHGTAP-----KYAGQDK-VNPGSIILSGEMMLEHMGW-------KEAADLIKKAMEKAIASKI 388 (416)
T ss_pred ceeeeCCC--ceEEECCCCCch-----hhcCCCC-CCcHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHcCC
Confidence 99999987 599999999999 9999999 9999999999999999996 6899999999999999999
Q ss_pred CCcchhhhhcCCcCCCccccCHHHHHHHHHHHH
Q 015124 373 MTKDLALIIHGSKMTREHYLNTEEFIDAVADDL 405 (413)
Q Consensus 373 ~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l 405 (413)
+|+||+...+|. +.++|+||+|+|+++|
T Consensus 389 ~T~Dl~~~~gg~-----~~~~T~e~~daI~~~l 416 (416)
T TIGR00183 389 VTYDFARLMDGA-----KEVKCSEFAEAIIENM 416 (416)
T ss_pred cccccccccCCC-----cccCHHHHHHHHHhhC
Confidence 999994100031 1489999999999875
No 25
>PRK07362 isocitrate dehydrogenase; Validated
Probab=100.00 E-value=7.7e-98 Score=757.37 Aligned_cols=348 Identities=19% Similarity=0.162 Sum_probs=299.3
Q ss_pred EEEECCCCccHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhccCC--CCCHHHHHHHHhCCeeEEcccCCCcc
Q 015124 12 IVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDD--KVTVESAEATLKYNVAIKCATITPDE 82 (413)
Q Consensus 12 I~vi~GDGIGpEv~~~~~~v~~~~-------~~~i~~~~~~~g~~~~~~~g~--~lp~~~~~ai~~~~v~lkg~~~~p~~ 82 (413)
|++|||||||||||+++++||.+. +++|+|.++++|+++++++|+ .+|++++++|+++|++||||+++|.+
T Consensus 31 I~vIpGDGIGpEI~~aa~kVL~a~~~~~~~~~~~i~~~~~~~G~~a~~~~G~~~~lP~etle~i~~~da~L~Gpi~tP~~ 110 (474)
T PRK07362 31 IPFIRGDGTGVDIWPATQKVLDAAVAKAYGGERKINWFKVYAGDEACDLYGTYQYLPEDTLEAIREYGVAIKGPLTTPIG 110 (474)
T ss_pred EEEeCCCcccHHHHHHHHHHHHHHHHhccCCCCCeEEEEEccCHHHHHHhCCCCCCCHHHHHHHHHCCEEEECcccCCCC
Confidence 999999999999999999988632 258999999999999999996 79999999999999999999999964
Q ss_pred hhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecC
Q 015124 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPE 160 (413)
Q Consensus 83 ~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~ 160 (413)
. +..|+|++||+.||||+|+||| +++||+++|++ + .+++|+||| ||||+|+|.
T Consensus 111 ~---------g~~s~~l~LRk~ldLyaNvRPv------r~~pgl~sp~k--~--------~~~iD~vIvRENTEGlY~G~ 165 (474)
T PRK07362 111 G---------GIRSLNVALRQIFDLYSCVRPC------RYYAGTPSPHK--N--------PEKLDVIVYRENTEDIYMGI 165 (474)
T ss_pred c---------CccchHHHHHHHcCCceeeeEe------eccCCCCCccc--C--------CCCCCEEEEEECCCceeccc
Confidence 3 4568899999999999999999 88999999875 1 468999999 899999998
Q ss_pred CCCccc--ceee----e----cc------cC-CCceEEE-eecChHHHHHHHHHHHHHHHhC---CCCEEEEeCCCcccc
Q 015124 161 GKDEKT--ELEV----Y----NF------TG-EGGVALS-MYNTDESIRAFAEASMNTAYQK---KWPLYLSTKNTILKK 219 (413)
Q Consensus 161 ~~~~~~--~~~~----~----~~------~~-~~~va~~-~~~Tr~~~eRiar~AFe~A~~r---~~~Vt~v~KaNVl~~ 219 (413)
++.... .+.. . .. .+ ..++|++ ++|||++++||+|+||+||++| ++|||+|||+|||+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~k~iTr~g~eRI~r~AFe~A~~r~~~rkkVT~VhKaNVlk~ 245 (474)
T PRK07362 166 EWEAGDEIGDKLIKHLNEEVIPASPELGKRQIPLGSGIGIKPVSKTGSQRHIRRAIEHALRLPGDKRHVTLVHKGNIMKY 245 (474)
T ss_pred ccccccccchhcccccccccccccccccccccccceeeeeeeccHHHHHHHHHHHHHHHHhcCCCCCeEEEEECCccccc
Confidence 631100 0000 0 00 01 1347889 9999999999999999999999 357999999999999
Q ss_pred ccHHHHHHHHHHHHhhc-------------------cCc-----------------------------------------
Q 015124 220 YDGRFKDIFQEVYEANW-------------------KSK----------------------------------------- 239 (413)
Q Consensus 220 t~glf~~~~~eva~~eY-------------------p~~----------------------------------------- 239 (413)
|+|+|++++.|||+++| |+-
T Consensus 246 t~glf~~~~~evA~~~~~~~~v~~~~~~~~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (474)
T PRK07362 246 TEGAFRDWGYELATTEFRDECVTERESWILSNKEKNPNISIEDNARMIEPGYDSLTPEKKAAICAEVKEVLDSIWSSHGN 325 (474)
T ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccCccccccccccccccccccccccccccccccccccccchhhcccc
Confidence 99999998889986334 410
Q ss_pred c-ccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccc
Q 015124 240 F-EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHY 317 (413)
Q Consensus 240 ~-~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~ 317 (413)
. ...+|.+++++||++|||||++|++| ||||+|||||||||++|+|+|||||+||+|||++ .+||||+|||||
T Consensus 326 ~~~~~~v~~~~~~vDa~a~~lv~~P~~FDVIVt~NLfGDILSDlaA~lvGglGlaPSANiG~~--~a~FEpvHGSAP--- 400 (474)
T PRK07362 326 GKWKEKVLVDDRIADSIFQQIQTRPQEYSILATLNLNGDYISDAAAAIVGGLGMAPGANIGDN--AAIFEATHGTAP--- 400 (474)
T ss_pred ccCCCcceeehHHHHHHHHHHHhChhhCCEEEEccccchhhhHHHHHhcCCccccceeeeCCC--ceeeecCCCCch---
Confidence 0 00148889999999999999999999 9999999999999999999999999999999988 599999999999
Q ss_pred cccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCC-CccccCHHH
Q 015124 318 RVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMT-REHYLNTEE 396 (413)
Q Consensus 318 ~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~-~~~~~sT~e 396 (413)
||||||+ |||+|||||++|||+|||+ .++|++|++||.+++++|.+|+||| |. ++ ....+||+|
T Consensus 401 --dIAGk~i-ANP~A~ILS~aMML~~LG~-------~~~A~~I~~AV~~vl~~g~~T~Dlg----~~-~~~~~~~~sT~E 465 (474)
T PRK07362 401 --KHAGLDR-INPGSVILSGVMMLEYLGW-------QEAADLITKGLSAAIANKQVTYDLA----RL-MEPPVDPLSCSE 465 (474)
T ss_pred --hhcCCCC-cCcHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHcCCcccCCC----Cc-cccCCCCcCHHH
Confidence 9999999 9999999999999999996 7899999999999999999999997 30 00 001589999
Q ss_pred HHHHHHHH
Q 015124 397 FIDAVADD 404 (413)
Q Consensus 397 ~~daV~~~ 404 (413)
|+++|+++
T Consensus 466 ~~~aIi~~ 473 (474)
T PRK07362 466 FAEAIISH 473 (474)
T ss_pred HHHHHHhc
Confidence 99999986
No 26
>PF00180 Iso_dh: Isocitrate/isopropylmalate dehydrogenase; InterPro: IPR024084 Isocitrate dehydrogenase (IDH) [, ] is an important enzyme of carbohydrate metabolism which catalyses the oxidative decarboxylation of isocitrate into alpha-ketoglutarate. IDH is either dependent on NAD+ (1.1.1.41 from EC) or on NADP+ (1.1.1.42 from EC). In eukaryotes there are at least three isozymes of IDH: two are located in the mitochondrial matrix (one NAD+-dependent, the other NADP+-dependent), while the third one (also NADP+-dependent) is cytoplasmic. In Escherichia coli the activity of a NADP+-dependent form of the enzyme is controlled by the phosphorylation of a serine residue; the phosphorylated form of IDH is completely inactivated. 3-isopropylmalate dehydrogenase (1.1.1.85 from EC) (IMDH) [, ] catalyses the third step in the biosynthesis of leucine in bacteria and fungi, the oxidative decarboxylation of 3-isopropylmalate into 2-oxo-4-methylvalerate. Tartrate dehydrogenase (1.1.1.93 from EC) [] catalyses the reduction of tartrate to oxaloglycolate. These enzymes are evolutionary related. To this family also belongs the enzyme tartrate dehydrogenase, which shows strong homology to prokaryotic isopropylmalate dehydrogenases and, to a lesser extent, isocitrate dehydrogenase []. This entry represents a structural domain found in all types of isocitrate dehydrogenase, and in isopropylmalate dehydrogenase and tartrate dehydrogenase. The crystal structure of Escherichia coli isopropylmalate dehydrogenase has been described []. ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 1WAL_A 1CNZ_B 2D4V_C 1CM7_A 4AOY_D 3FMX_X 3FLK_C 1A05_A 1X0L_B 4F7I_D ....
Probab=100.00 E-value=1.9e-96 Score=740.90 Aligned_cols=336 Identities=26% Similarity=0.289 Sum_probs=294.9
Q ss_pred cEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhhH
Q 015124 11 PIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVK 86 (413)
Q Consensus 11 ~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~ 86 (413)
+|++|||||||||||+++++++.+. +++|+|+++++|..+++++|+++|++++++|+++|++||||+++|.....
T Consensus 1 kI~vipGDGIGpEv~~~~~~Vl~a~~~~~~~~~e~~~~~~G~~~~~~~g~~lp~et~~~i~~~daiL~Gai~~p~~~~~- 79 (348)
T PF00180_consen 1 KIAVIPGDGIGPEVMPAALRVLEAAAEKYGLDFEFEEFDIGGEAYDKTGEPLPDETLEAIKRADAILKGAIGTPKPPGI- 79 (348)
T ss_dssp EEEEEEESTTHHHHHHHHHHHHHHHHHHHTEEEEEEEEETSHHHHHHHSSSSHHHHHHHHHHCSEEEEEE--CGGSSSH-
T ss_pred CcceeccCcchHHHHHHHHHHHHHHHhhcccccccccccchhhhhhhccccccHHHHHHHhhcCcEEEccccccccccc-
Confidence 6899999999999999999988654 58999999999999999999999999999999999999999999983311
Q ss_pred HHHhhccCCCcchhhhhhcCceEEeeeeeccCCcccc--CCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCC
Q 015124 87 EFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLI--PGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGK 162 (413)
Q Consensus 87 ~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~--pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~ 162 (413)
+++. ++++||++||||+|+||+ +++ ++..+|++-.. .+++|++|| ||||+|+|.++
T Consensus 80 -----~~~~-~l~~lR~~ldl~anvRp~------~~~~~~~~~~~~~~~~--------~~~iDivivREnteG~Y~g~~~ 139 (348)
T PF00180_consen 80 -----RSEN-GLLKLRKELDLYANVRPV------RSFPGPGVPSPLKDEI--------PEGIDIVIVRENTEGLYSGIEH 139 (348)
T ss_dssp -----SHHH-HHHHHHHHTTHHEEEEEE------EEECETTGGSSBSHHH--------HTTSEEEEEEESSSGGGGEEEE
T ss_pred -----ccHH-HHHHHHHhcccceeeEEE------EEeccccccccccccc--------cCcceEEEecccccCcccCCCC
Confidence 1222 338999999999999999 777 56667775222 368999999 89999999865
Q ss_pred CcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhC-CCCEEEEeCCCccccccHHHHHHHHHHHHhhccCcc
Q 015124 163 DEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKF 240 (413)
Q Consensus 163 ~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~ 240 (413)
..... .. .++++++ ++|||++++||+|+||+||++| +++||+|||+|||+.++ ||+++|+||++++||
T Consensus 140 ~~~~~-----~~-~~~~a~~~~~~t~~~~eRi~r~AF~~A~~r~~k~Vt~v~KaNvl~~~~-lf~~~~~eva~~~yp--- 209 (348)
T PF00180_consen 140 EIGDG-----GT-PDEVAIDTKVITREGIERIARFAFEYARKRGRKKVTVVHKANVLKSTD-LFREVFQEVAKQEYP--- 209 (348)
T ss_dssp EECSE-----EE-GSSEEEEEEEEEHHHHHHHHHHHHHHHHHTTTSEEEEEESTTTSTTHH-HHHHHHHHHHHHTHT---
T ss_pred ceeec-----cC-CCceEEEeeccccchhhHHHHHHHHHHHHhCCceEEEEeccchhHHHH-HHHHHHHHHHHhhcc---
Confidence 21100 01 1568999 9999999999999999999999 67899999999999888 999999999976799
Q ss_pred ccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccc
Q 015124 241 EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRV 319 (413)
Q Consensus 241 ~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~ 319 (413)
+|++++++||+++|+||++|++| ||||+|||||||||++|+++||+||+||+|||+++ ++||||+|||||
T Consensus 210 ---~I~~~~~~vD~~~~~Lv~~P~~fdViv~~Nl~GDIlSDl~a~l~G~lGl~psanig~~~-~a~fEp~HGSAp----- 280 (348)
T PF00180_consen 210 ---DIEVEHMLVDAAAMQLVKNPEQFDVIVTPNLFGDILSDLAAGLVGGLGLAPSANIGPDG-HAMFEPVHGSAP----- 280 (348)
T ss_dssp ---TSEEEEEEHHHHHHHHHHSGGGESEEEEEHHHHHHHHHHHHHHHTSGGGEEEEEEETSS-EEEEEESSTTTG-----
T ss_pred ---eeEeeeeechhhhheeecCCcceeEEeecchhHHHHHHHhhhcCCChhhhhhhccCccc-cccccccccccc-----
Confidence 99999999999999999999999 99999999999999999999999999999999654 799999999999
Q ss_pred cccCCCCccChHHHHHHHHHHHHH-hcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHH
Q 015124 320 HQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFI 398 (413)
Q Consensus 320 diaGk~i~ANP~A~IlS~ammL~~-lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~ 398 (413)
||||||+ |||+|||||++|||+| ||. .+.|++|++||.+++++|++|+||| |.- .+.++|+||+
T Consensus 281 diaGk~~-aNP~a~Ils~a~mL~~~lg~-------~~~a~~i~~Av~~~l~~g~~T~Dlg----g~~---~~~~~T~e~~ 345 (348)
T PF00180_consen 281 DIAGKGI-ANPIAMILSAAMMLEHSLGL-------PEAADAIEKAVEKVLEEGIRTPDLG----GSA---TTAVSTEEFG 345 (348)
T ss_dssp GGTTSSH-S-THHHHHHHHHHHHHHHTH-------HHHHHHHHHHHHHHHHTTEEBGGGH----TTT---CEEBHHHHHH
T ss_pred cccCCcc-cCcHHHHHHHHHHHHHhcCC-------hHHHHHHHHHHHHHHHcCCCCcccc----CCC---CCCCCHHHHH
Confidence 9999999 9999999999999999 885 7899999999999999999999998 521 1246999999
Q ss_pred HHH
Q 015124 399 DAV 401 (413)
Q Consensus 399 daV 401 (413)
|+|
T Consensus 346 daV 348 (348)
T PF00180_consen 346 DAV 348 (348)
T ss_dssp HHH
T ss_pred hhC
Confidence 997
No 27
>PLN00096 isocitrate dehydrogenase (NADP+); Provisional
Probab=100.00 E-value=1.5e-92 Score=708.30 Aligned_cols=377 Identities=32% Similarity=0.407 Sum_probs=343.3
Q ss_pred EEEECCCCccHHHHHHHHHHHhcCCCceE-EEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhhHHHHh
Q 015124 12 IVEMDGDEMTRVFWKSIKDKLIFPFLELD-IKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVL 90 (413)
Q Consensus 12 I~vi~GDGIGpEv~~~~~~v~~~~~~~i~-~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~~~~~ 90 (413)
+|.|.||+|.+.+|+.+++.|+.+.++++ |+|+|+|.+++++|++++.-++++++++++|++|||+.||+..++++++|
T Consensus 1 ~v~~~gdemtr~~~~~i~~~li~p~~d~~~~~y~DL~~~~Rd~T~dqvt~daa~a~~~~~vgvKcatiTp~~~rv~e~~l 80 (393)
T PLN00096 1 MVYVAGEEMTRYTMDLILAKWIEPHVDTSAWEFFDLRAKNRDDTEDQVLRDVIEAGARLKAIFKEPTITPTADQVKRLGL 80 (393)
T ss_pred CeeecchHHHHHHHHHHHHhhccceeccccceeeccCCccccccCCcchHHHHHHHHHhCeeeeecccCCCHHHHHhhch
Confidence 47899999999999999999999999996 99999999999999999999999999999999999999999999999999
Q ss_pred hccCCCcchhhhhhcCc-eEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe---eeceeeecCCCCccc
Q 015124 91 KQMWKSPNGTIRNILNG-TVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI---SLSVFDVPEGKDEKT 166 (413)
Q Consensus 91 ~~~~~s~~~~LRk~ldl-~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv---nteG~Y~g~~~~~~~ 166 (413)
++.|+|||.+||+.||+ .+++.||.++|++ |||++|+.+.| |+++|.|+. |+++. ..+-.|.+.+|+.+.
T Consensus 81 k~~w~sPNgtiR~~l~G~tvfR~pi~~~~i~---~~w~kpi~i~R--ha~gd~y~a-~~~~~~~g~~~~~~~~~~g~~~~ 154 (393)
T PLN00096 81 KKAWGSPNGAMRRGWNGITISRDTIHIDGVE---LGYKKPVFFER--HAVGGEYSA-GYKIVGKGTLVTTFVPEEGGKPI 154 (393)
T ss_pred hhhcCCCcHHHHhhcCCceEeeCCEecCCCC---CCccCceEEEe--eccCCcccc-ceEecCCcEEEEEEEeCCCCCce
Confidence 99999999999999999 9999999999885 99999999999 999999999 98877 479999998876677
Q ss_pred ceeeecccCCCceEEEeecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCccccC---
Q 015124 167 ELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAA--- 243 (413)
Q Consensus 167 ~~~~~~~~~~~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~--- 243 (413)
+++++++.+.++++..+++|.+.++||||+||+||++|+++||++||+|||++++|||+ +|+||++++|+++|.++
T Consensus 155 ~~~~~~f~~~~gv~~~~~N~~~si~RiAr~AF~~A~~r~~~Vt~v~KaNILK~tdg~f~-if~eVa~~eyk~~f~~~~~~ 233 (393)
T PLN00096 155 VVDDRTITDDLNAVVTYHNPLDNVHHLARIFFGRCLDAGIVPYVVTKKTVFKWQEPFWE-IMKKVFDEEFKSKFVDKGVM 233 (393)
T ss_pred EEEEEecCCCCeEEEEeccCHHHHHHHHHHHHHHHHHhCCcEEEEeCccccccchHHHH-HHHHHHHHHHhhhhhhcccC
Confidence 77888887336788889999999999999999999999999999999999999999998 99999855898777663
Q ss_pred --CeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCC--Cc-eEEEccccccccccc
Q 015124 244 --GIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPD--GK-TIEAEAAHGTVTRHY 317 (413)
Q Consensus 244 --~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~--~~-~a~FEp~HGSAp~~~ 317 (413)
+|+++|+|||+||||||++|++| ||||+|||||||||++|+++|||||+||+|+|++ +. +++|||+|||||+++
T Consensus 234 ~p~V~~e~~lIDa~~~qlVk~P~~fdViv~~NlfGDIlSDlaA~l~GsLGl~pSanig~d~dg~~~a~fEp~HGSApdia 313 (393)
T PLN00096 234 KSGDELVHLLSDAATMKLVVWTDGGFGMAAHNYDGDVLTDELAQVHKSPGFITSNLVGVDENGTLIKEFEASHGTVTDMD 313 (393)
T ss_pred CCceEEEeeeHHHHHHHHHhCcccCCEEEECcccchHHHHHHHHhcCCcccccccccCCccCCccceEEEcCCCChHHhh
Confidence 57899999999999999999999 9999999999999999999999999999999954 62 389999999999544
Q ss_pred cccccCCC-CccChHHHHHHHHHHHHHhcccCCch-hhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHH
Q 015124 318 RVHQKGGE-TSTNSIASIFAWSRGLAHRAKLDNNA-RLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTE 395 (413)
Q Consensus 318 ~~diaGk~-i~ANP~A~IlS~ammL~~lG~~~~~~-~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~ 395 (413)
++++.||+ + |||+|+|||++|||+|+++++... +|.++|++|++||.+|+++|++|+||+ |. ..++|+
T Consensus 314 g~~~~Gk~~~-ANPiA~IlA~a~mL~~~~~l~g~~~~l~~~A~~Ie~Av~~tie~G~~T~DL~----g~-----~~~tT~ 383 (393)
T PLN00096 314 EARLRGEETS-LNPLGMVEGLIGAMNHAADVHGGKERVHPFTAKLRAVIHKLFREGRGTRDLC----GA-----GGLTTE 383 (393)
T ss_pred hhhhcCCCCc-cChHHHHHHHHHHHHhhcccCCCchhhHHHHHHHHHHHHHHHhcCCcCcCCC----CC-----CCCCHH
Confidence 44444996 8 999999999999999998765443 678899999999999999999999996 31 158999
Q ss_pred HHHHHHHHHH
Q 015124 396 EFIDAVADDL 405 (413)
Q Consensus 396 e~~daV~~~l 405 (413)
||+|+|+++|
T Consensus 384 ef~daI~~~L 393 (393)
T PLN00096 384 QFIDAVAEEL 393 (393)
T ss_pred HHHHHHHHhC
Confidence 9999999875
No 28
>KOG0784 consensus Isocitrate dehydrogenase, gamma subunit [Amino acid transport and metabolism]
Probab=100.00 E-value=4.9e-84 Score=628.25 Aligned_cols=324 Identities=20% Similarity=0.205 Sum_probs=297.3
Q ss_pred cccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhhHHH
Q 015124 9 ANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEF 88 (413)
Q Consensus 9 ~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~~~ 88 (413)
.+++++|||||||||++.++.+++.+..+|++|+++++++ -.+.+...+++++++++++++.|||.+.||...
T Consensus 42 ~~tVTlipGdGIGpe~~~~V~~v~~a~~~PV~fE~i~v~~--~~~~~~~~~~e~v~Si~rNkValkG~i~t~~~~----- 114 (375)
T KOG0784|consen 42 RHTVTLIPGDGIGPELTNAVREVFSAAHAPVEFEEIEVSG--SNKESSEDLDEAVESIKRNKVALKGNIETPDLP----- 114 (375)
T ss_pred cceEEEeCCCCcCHHHHHHHHHHHHhcCCCeeEEEEEccC--CccccchhHHHHHHHHHhcceeEeecccCCCCc-----
Confidence 3789999999999999999999999999999999999987 223444578999999999999999999999321
Q ss_pred HhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCCccc
Q 015124 89 VLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKDEKT 166 (413)
Q Consensus 89 ~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~~~~ 166 (413)
...+|.|++||++||||||+-.| +.+||+++ | ++++|++|| ||||+|+|.|+.
T Consensus 115 ---g~~~s~n~~LR~~LDLyanvv~~------~slpG~~t-----R--------h~~vDiviIRENTEGEYs~LEHE--- 169 (375)
T KOG0784|consen 115 ---GGAKSLNVKLRKELDLYANVVHC------KSLPGVKT-----R--------HENVDIVIIRENTEGEYSGLEHE--- 169 (375)
T ss_pred ---cchhhhHHHHHHhhhhhhheeee------eccCCccc-----c--------cCCccEEEEecCCcccccccccc---
Confidence 25689999999999999999988 88999985 4 479999999 899999999762
Q ss_pred ceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCC-CEEEEeCCCccccccHHHHHHHHHHHHhhccCccccCC
Q 015124 167 ELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAG 244 (413)
Q Consensus 167 ~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~ 244 (413)
. - ++|..+ +++|++.++|||||||+||.+.+| |||+|||||+||.+||||+++|+||++ .|| +
T Consensus 170 ---~----V-pGVVEsLKVvT~~kseRIaryAF~yA~k~gRKkVTaVHKAnimKL~DGlFle~~~eva~-~Yp------~ 234 (375)
T KOG0784|consen 170 ---S----V-PGVVESLKVVTRFKSERIARYAFEYAKKNGRKKVTAVHKANIMKLGDGLFLESCQEVAK-KYP------D 234 (375)
T ss_pred ---c----C-cchhheeeeehhhhhHHHHHHHHHHHHHhCCceEEEEeccCceecchhhHHHHHHHHHh-cCC------C
Confidence 1 1 679999 999999999999999999999975 799999999999999999999999998 599 9
Q ss_pred eEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcc--ccccccccccccc
Q 015124 245 IWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEA--AHGTVTRHYRVHQ 321 (413)
Q Consensus 245 I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp--~HGSAp~~~~~di 321 (413)
|+++.|+||++|||||.+|++| |+|+|||||.|+|.+||+|+||.|+.|++|+|++ +++||| .|+.. ++
T Consensus 235 I~~e~miVDN~~MQlvs~P~qFDvmv~pnlYgniisNiaaGlvGG~Glv~G~n~G~~--yAVFE~g~r~~~~------~~ 306 (375)
T KOG0784|consen 235 ITFEEMIVDNACMQLVSRPQQFDVMVMPNLYGNIISNIAAGLVGGAGLVSGANYGDD--YAVFEPGARHTGT------SI 306 (375)
T ss_pred ccHHHhhHHHhHHHhhcCchheeeEechHHHHHHHHHHHHHhcCCCCcccccccccc--eEEecccccccch------hh
Confidence 9999999999999999999999 9999999999999999999999999999999999 799999 36654 69
Q ss_pred cCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC-CCCcchhhhhcCCcCCCccccCHHHHHHH
Q 015124 322 KGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKMTREHYLNTEEFIDA 400 (413)
Q Consensus 322 aGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg~~~~G~~~~~~~~~sT~e~~da 400 (413)
+||++ |||+|||+|++|||+|||. +.+|++|+.||.+|+.+| ++|+||| | ..||++|+++
T Consensus 307 ~g~~~-aNPtA~llss~~MLrHL~l-------~~~Ad~i~~Av~~vi~egk~rT~DlG----G-------~~Tt~dvi~a 367 (375)
T KOG0784|consen 307 AGKNI-ANPTAMLLSSVDMLRHLGL-------PSHADRISTAVKRVIDEGKIRTKDLG----G-------QSTTQDVIDA 367 (375)
T ss_pred hcccc-cCcHHHHHHHHHHHHHcCC-------hHHHHHHHHHHHHHHhcCcccccccC----C-------CcchHHHHHH
Confidence 99999 9999999999999999984 799999999999999999 8999998 7 7999999999
Q ss_pred HHHHHH
Q 015124 401 VADDLR 406 (413)
Q Consensus 401 V~~~l~ 406 (413)
||.+|+
T Consensus 368 vI~~l~ 373 (375)
T KOG0784|consen 368 VIANLR 373 (375)
T ss_pred HHHHhc
Confidence 999985
No 29
>COG0538 Icd Isocitrate dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=2.3e-81 Score=618.39 Aligned_cols=351 Identities=34% Similarity=0.455 Sum_probs=310.4
Q ss_pred EEEECCCCccHHHHHHHHHHHhc----CC---CceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchh
Q 015124 12 IVEMDGDEMTRVFWKSIKDKLIF----PF---LELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR 84 (413)
Q Consensus 12 I~vi~GDGIGpEv~~~~~~v~~~----~~---~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~ 84 (413)
|-+|.||||||||++++.+++.+ ++ .+|+|.++++|.++++.||+.||+||+++|+++.|++|||++||.+.
T Consensus 21 iP~IegDgiG~eit~~~~kvi~aav~k~Y~g~~~I~w~e~~aG~ka~d~tg~~lp~etl~aikky~VaIKgpl~TPvg~- 99 (407)
T COG0538 21 IPFIEGDGIGDEITRAIWKVIDAAVEKAYGGERKIEWKEVDAGEKARDKTGDQLPIETLEAIKKYGVAIKGPLTTPVGK- 99 (407)
T ss_pred cceEecCCCcHHHHHHHHHHHHHHHHhhcCCcceeEEEEEecchHHHHhhcCcCCHHHHHHHHHhCEEeeccccCcccc-
Confidence 45999999999999999997643 45 89999999999999999999999999999999999999999999765
Q ss_pred hHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCC
Q 015124 85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGK 162 (413)
Q Consensus 85 ~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~ 162 (413)
+|+|||++||+.||||+|+||| +++||+|+|++ + ++.+|+||. |||+.|.|.++
T Consensus 100 --------g~rSlNvtlRq~Ldly~~~rPv------~y~~gvPspvk--~--------pe~~dmVIfRenteDiYagiE~ 155 (407)
T COG0538 100 --------GWRSLNVTLRQILDLYVFRRPV------RYFPGVPSPVK--R--------PEKVDMVIFRENTEDIYAGIEW 155 (407)
T ss_pred --------cccCchHHHHHHcCceEeeeeE------EecCCCCCCCC--C--------cccCCeEEEeccccchhheeee
Confidence 8999999999999999999999 77789999975 2 478999988 89999999876
Q ss_pred Cccc--ceeeecc----cC------CCceEEE-eecChHHHHHHHHHHHHHHHhCCC-CEEEEeCCCccccccHHHHHHH
Q 015124 163 DEKT--ELEVYNF----TG------EGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIF 228 (413)
Q Consensus 163 ~~~~--~~~~~~~----~~------~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNVl~~t~glf~~~~ 228 (413)
..+. .++++.+ .+ +++..+. +.+++++++|++|.||+||.+++| .||++||-|+||.|+|-|++++
T Consensus 156 ~~~s~~a~kl~~fl~~e~~~~~i~~pe~~GIgikp~s~~~s~Rlvr~ai~yAi~~~r~~VtlvhKgnImK~teGaFkdw~ 235 (407)
T COG0538 156 KAGSPEALKLIFFLEDEMGVKKIRFPEDSGIGIKPISKEGSIRLVRAAIEYAIENKRKSVTLVHKGNIMKFTEGAFKDWG 235 (407)
T ss_pred ccCCcchhhhhhhhhcccccceEecCCCCceEEEecCchhhHHHHHHHHHHHHHcCCceEEEEecCeeeecccchHHHHH
Confidence 2221 1111101 00 1357788 999999999999999999999984 7999999999999999999999
Q ss_pred HHHHHhh--------ccCccccCC----eEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCccccccc
Q 015124 229 QEVYEAN--------WKSKFEAAG----IWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSV 295 (413)
Q Consensus 229 ~eva~~e--------Yp~~~~~~~----I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSa 295 (413)
.|||+++ |..+|+..+ |.++|+++|+|.+|++++|+.| ||+|.||.||++||.+|+.+|||||+||+
T Consensus 236 yeva~~~ef~~~~~~~~~~~~~~~~~gkI~~~driaD~mlqQil~r~~eydViA~~NlnGDy~SDa~Aa~vGglGi~pga 315 (407)
T COG0538 236 YEVAEEEEFGDEVVTGKEKFELKGPKGKIVYKDRIADDMLQQILLRPGEYDVIATKNLNGDYISDALAAQVGGLGLAPGA 315 (407)
T ss_pred HHHHhhhcccccccccchhhhccCcCceEEEehhhHHHHHHHHhcCCCCceEEEeccCCccHHHHHHHHhcCCccccccc
Confidence 9999863 566777777 9999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCceEEEccccccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCc
Q 015124 296 LVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTK 375 (413)
Q Consensus 296 nig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~ 375 (413)
|||+. +++|||+||||| .+|||+. +||+|.|||+.|||+|+|+ .++|+.|+.||..++++|++|+
T Consensus 316 ni~~~--~~~fEA~HGTap-----k~aG~~~-~Np~a~Ils~~~ml~~~Gw-------~eaa~li~~a~~~ti~~~~vT~ 380 (407)
T COG0538 316 NIGDG--TAEFEATHGTAP-----KYAGKDS-TNPIASILSGTMMLRHRGW-------LEAADLIEKAVEDTIESGKVTY 380 (407)
T ss_pred eecCc--eEEEEeccCccc-----cccCcCC-CCcHHHHHHHHHHHHHhhh-------hhhHHHHHHHHHHHHHhCceeH
Confidence 99944 799999999999 7889998 9999999999999999998 4789999999999999999999
Q ss_pred chhhhhcCCcCCCccccCHHHHHHHHHHHHH
Q 015124 376 DLALIIHGSKMTREHYLNTEEFIDAVADDLR 406 (413)
Q Consensus 376 Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l~ 406 (413)
||+...+|. ...++|+||+|+|+++|+
T Consensus 381 DlArl~~~~----~~~v~tsEF~d~ii~~l~ 407 (407)
T COG0538 381 DLARLMGGA----KRYLSTSEFADAIIENLK 407 (407)
T ss_pred HHHHhhCCC----ccceeHHHHHHHHHHhcC
Confidence 998654331 126999999999999873
No 30
>KOG0786 consensus 3-isopropylmalate dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.5e-82 Score=592.00 Aligned_cols=341 Identities=21% Similarity=0.187 Sum_probs=305.5
Q ss_pred cccEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchh
Q 015124 9 ANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR 84 (413)
Q Consensus 9 ~~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~ 84 (413)
-|+|+++|||||||||+..+.++|.+. ++.|+|++..+|+.+.+.+|.|+|+|++++.|++|++|+|+++.+.|+.
T Consensus 4 ~~~i~llpgd~ig~ev~s~a~~vlq~~~~l~~vefdf~~~~iggaald~~gvplpeet~~aak~sdavllgaigg~kw~~ 83 (363)
T KOG0786|consen 4 RYNITLLPGDGIGPEVISVAKNVLQKAGSLEGVEFDFEEMPIGGAALDLVGVPLPEETLTAAKKSDAVLLGAIGGYKWDK 83 (363)
T ss_pred cceEEEcCCCCcCHHHHHHHHHHHHHhccccceeeccccCcccccchhccCCCCCHHHHhhhhhcceeEeecccCcccCc
Confidence 389999999999999999999998765 7899999999999999999999999999999999999999999998873
Q ss_pred hHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCc--chhhhHHHHHhhhcccCCcceEEe--eeceeeecC
Q 015124 85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGML--LVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPE 160 (413)
Q Consensus 85 ~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~--~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~ 160 (413)
.+.+|+.++ +.||+.|.+|||+||+ .++|.+- +|++.. ..+++|++|| -|+|+|+|.
T Consensus 84 ----~~lrpe~gl-l~ir~~lkvfanlrp~------~~~~qlvd~s~lk~e--------~aeg~d~mvvrel~ggiyfge 144 (363)
T KOG0786|consen 84 ----NHLRPEMGL-LKIRRDLKVFANLRPA------TVLPQLVDASTLKKE--------VAEGVDMMVVRELTGGIYFGE 144 (363)
T ss_pred ----CCcChhhhH-HHHHHHHHHHhcCCcc------hhhHhhhccccccHH--------HhcCcceEEeeeecCceeecC
Confidence 245678886 9999999999999999 4444432 666532 2589999999 399999997
Q ss_pred CCCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCC--CCEEEEeCCCccccccHHHHHHHHHHHHhhcc
Q 015124 161 GKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKK--WPLYLSTKNTILKKYDGRFKDIFQEVYEANWK 237 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~--~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp 237 (413)
.. +..| ++++++ ..|+-+++.||+|.||+.|++|+ .++|++||+||+. ++.|||+.+.+..++|||
T Consensus 145 ~r---------~eng-~gva~dte~Ya~~Ev~RIaR~Aa~~A~~~~pp~pl~slDKANVLa-aSrLWRKtV~~~~k~EyP 213 (363)
T KOG0786|consen 145 PR---------NENG-EGVAFDTEIYAAHEVDRIARVAAETARKRRPPGPLCSLDKANVLA-ASRLWRKTVTKALKSEYP 213 (363)
T ss_pred cc---------cCCC-cceeeccccccHHHHHHHHHHHHHHHHhhCCCCCccccchhhHHH-HHHHHHHHHHHHHHhhCC
Confidence 32 1235 789999 99999999999999999999998 6899999999999 999999999988777999
Q ss_pred CccccCCeEEeeeeHHHHHHHHHhCCCce--EEEecCCchhhhhhhHhhhcCCcccccccccC-----CCCceEEEcccc
Q 015124 238 SKFEAAGIWYEHRLIDDMVAYALKSEGGY--VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVC-----PDGKTIEAEAAH 310 (413)
Q Consensus 238 ~~~~~~~I~~~~~~VD~~a~~Lv~~P~~F--Viv~~NlfGDILSDlaa~l~GslGlapSanig-----~~~~~a~FEp~H 310 (413)
++++.|+|||+++|+||++|.+| +|||.|+|||||||.++.+.||+||.||++++ +.+ +++|||+|
T Consensus 214 ------~l~l~hqliDsAAM~Lvk~P~~lng~ivT~NiFGDIiSDEASvIpGSlGlLPSASLs~v~~~es~-~gL~EPiH 286 (363)
T KOG0786|consen 214 ------DLELSHQLIDSAAMQLVKDPKQLNGTIVTNNIFGDIISDEASVIPGSLGLLPSASLSGVVSEESG-PGLFEPIH 286 (363)
T ss_pred ------CcchhhhhhhHHHHHHhcCchhcCceEEeccchhhhhccccccccCccccccchhhcCCcccccC-CcccccCC
Confidence 99999999999999999999999 99999999999999999999999999999998 555 79999999
Q ss_pred ccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCcc
Q 015124 311 GTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREH 390 (413)
Q Consensus 311 GSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~ 390 (413)
|||| ||+||++ +||+|+|||++|||.| .++ .+++|++||+||..++..|++|.||| |
T Consensus 287 GSAP-----Diagk~k-vNPlaTILSAamlLky--gLn----~pkeakaIEdAV~kvLd~G~rTgDlg----g------- 343 (363)
T KOG0786|consen 287 GSAP-----DIAGKDK-VNPLATILSAAMLLKY--GLN----EPKEAKAIEDAVVKVLDKGFRTGDLG----G------- 343 (363)
T ss_pred CCCC-----CcCCCCc-cChHHHHHHHHHHHHh--cCC----ChhhHHHHHHHHHHHHhccccccccC----C-------
Confidence 9999 9999999 9999999999999999 454 37999999999999999999999998 5
Q ss_pred ccCHHHHHHHHHHHHHHHh
Q 015124 391 YLNTEEFIDAVADDLRARL 409 (413)
Q Consensus 391 ~~sT~e~~daV~~~l~~~~ 409 (413)
..||.+.+++|.+.+...+
T Consensus 344 ~~st~~~~kav~EEv~Kil 362 (363)
T KOG0786|consen 344 PGSTLVGCKAVGEEVLKIL 362 (363)
T ss_pred CCcchhhHHHHHHHHHHhc
Confidence 5777788888877776554
No 31
>KOG1526 consensus NADP-dependent isocitrate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=6.8e-76 Score=563.63 Aligned_cols=407 Identities=73% Similarity=1.153 Sum_probs=387.1
Q ss_pred CCccceeccccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCC
Q 015124 1 MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITP 80 (413)
Q Consensus 1 ~~~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p 80 (413)
++|+||++.+||+.+.||+|...||+.+.+.|+-+.+++++.++|+|.+.+++|+++++.++.+++++++|++||++.||
T Consensus 10 ~~~~kikv~~pvVemdGDEmTRiIW~~Ik~KLIlPyldldlkyyDLgie~RD~T~DqVTid~A~A~lky~V~iKCATITP 89 (422)
T KOG1526|consen 10 SGMSKIKVANPVVEMDGDEMTRIIWKLIKEKLILPYLDLDLKYYDLGIENRDATNDQVTIDAAEAILKYNVGIKCATITP 89 (422)
T ss_pred chhceeeccCCeEEecccHHHHHHHHHHHhhcccceeeeceeeeecCCcccccccceeeHHHHHHHHHhCceeEEeecCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe---eeceee
Q 015124 81 DEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI---SLSVFD 157 (413)
Q Consensus 81 ~~~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv---nteG~Y 157 (413)
+..+++++.+++.|+|||.+||..|++.+++.||.|+|+||+.|||.+|++++| |+++|.|+..|+||- ..+-.|
T Consensus 90 DEaRv~Ef~LkkMWkSPNGTIRNILgGTVFREpIi~kniPrlVpgW~kPI~IGR--HAfgDQYkatD~vv~~~gkl~l~f 167 (422)
T KOG1526|consen 90 DEARVEEFNLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPIIIGR--HAFGDQYKATDFVVPGPGKLELVF 167 (422)
T ss_pred cHHHHHHhhhHHHhcCCCcchhhhcCceeeccceecCCcccccCCCccceEEee--ccccccceeeeEeecCCCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999 999999999997766 578999
Q ss_pred ecCCCCcccceeeecccCCCceEEEeecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcc
Q 015124 158 VPEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWK 237 (413)
Q Consensus 158 ~g~~~~~~~~~~~~~~~~~~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp 237 (413)
.+.++..+.++.|+++.+ ++++..+.+|.+.++-+|+.+|+||.+++.++++.+|-++|+.+||-|.++|+|+++.+|+
T Consensus 168 ~~~dg~~~~~~~V~~f~~-~G~~~~m~~~dds~~~FAhssf~~Al~kk~pLylsTKNTILKkYDgrFKdiFqeiye~~yk 246 (422)
T KOG1526|consen 168 TPSDGTQKVTLKVYDFKG-SGVAAMMYNTDDSIRGFAHSSFQYALQKKWPLYLSTKNTILKKYDGRFKDIFQEIYEKQYK 246 (422)
T ss_pred ecCCCCcceeEEEEecCC-CceeEEEeeccchhhHHHHHHHHHHHHhcCceeeeccchHHHHhCChHHHHHHHHHHHHHH
Confidence 988776666778888877 7888888889999999999999999999999999999999999999999999999987999
Q ss_pred CccccCCeEEeeeeHHHHHHHHHhCCCceEEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccc
Q 015124 238 SKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHY 317 (413)
Q Consensus 238 ~~~~~~~I~~~~~~VD~~a~~Lv~~P~~FViv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~ 317 (413)
.+|++.+|+|||.+||+|.+|++++-++|||.|.|++||+-||..|+-.|||||+.|..+++||++-.-|++|||..|||
T Consensus 247 ~kfe~~~IwYEHRLIDDmVAqa~KS~GGfvwAcKNYDGDVqSD~vAQg~GSLGlMTSVLv~pdGKT~EaEAAHGTVtRHy 326 (422)
T KOG1526|consen 247 SKFEALGIWYEHRLIDDMVAQAMKSEGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVCPDGKTVEAEAAHGTVTRHY 326 (422)
T ss_pred HHHHhhcchhhhhhHHHHHHHHHhcCCceEEEeecCCCchhhhHHHhcccchhhheeEEEcCCCCeeeeeccccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999997778899999999999
Q ss_pred cccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHH
Q 015124 318 RVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEF 397 (413)
Q Consensus 318 ~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~ 397 (413)
+.+..|+..|.||||.|++|.--|.|.|.+|.|++|..+++.||+|+..|+++|..|.||..+++| ..+|...++|+||
T Consensus 327 r~hqkG~eTSTN~IASIFAWtRgl~hR~kLD~n~~l~~F~~~LE~aci~tve~G~MTKDLal~i~g-~~~r~~y~~T~eF 405 (422)
T KOG1526|consen 327 RMHQKGQETSTNSIASIFAWTRGLAHRAKLDNNEALAKFANALEKACIETVESGKMTKDLALCIHG-KVERSDYLNTEEF 405 (422)
T ss_pred HHHhcCCCccCcchHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhccchHhHHHHhcC-CccccccccHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999877766 3455667999999
Q ss_pred HHHHHHHHHHHhhc
Q 015124 398 IDAVADDLRARLSG 411 (413)
Q Consensus 398 ~daV~~~l~~~~~~ 411 (413)
.|+|.++|+..|.+
T Consensus 406 idav~~~L~~~~~~ 419 (422)
T KOG1526|consen 406 IDAVASNLKKKLAQ 419 (422)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999887754
No 32
>PF03971 IDH: Monomeric isocitrate dehydrogenase; InterPro: IPR004436 This family of enzymes catalyses the NADP(+)-dependent oxidative decarboxylation of isocitrate to form 2-oxoglutarate, CO2, and NADPH within the Krebs cycle (1.1.1.42 from EC). Thus this enzyme supplies the cell with a key intermediate in energy metabolism, and precursors for biosynthetic pathways. The activity of this enzyme, which is controlled by phosphorylation, helps regulate carbon flux between the Krebs cycle and the glyoxylate bypass, which is an alternate route that accumulates carbon for biosynthesis when acetate is the sole carbon source for growth []. The phosphorylation state of this enzyme is controlled by isocitrate dehydrogenase kinase/phosphatase. This family has been found in a number of bacterial species including Azotobacter vinelandii, Corynebacterium glutamicum, Rhodomicrobium vannielii, and Neisseria meningitidis. The structure of isocitrate dehydrogenase from Azotobacter vinelandii (P16100 from SWISSPROT) has been determined []. This molecule consists of two distinct domains, a small domain and a large domain, with a folding topology similar to that of dimeric isocitrate dehydrogenase from Escherichia coli (P08200 from SWISSPROT). The structure of the large domain repeats a motif observed in the dimeric enzyme. Such a fusional structure by domain duplication enables a single polypeptide chain to form a structure at the catalytic site that is homologous to the dimeric enzyme, the catalytic site of which is located at the interface of two identical subunits.; GO: 0004450 isocitrate dehydrogenase (NADP+) activity, 0006099 tricarboxylic acid cycle, 0055114 oxidation-reduction process; PDB: 1ITW_D 1J1W_A 3MBC_A 2B0T_A.
Probab=97.30 E-value=0.0063 Score=65.02 Aligned_cols=189 Identities=15% Similarity=0.174 Sum_probs=113.9
Q ss_pred ceEEEeecChHHHHHHHHHHHHHHHhCCCC-EEEEeCCCccccccHHHHHHHHHHHHhhccCccccCCeEEeeee-HHHH
Q 015124 178 GVALSMYNTDESIRAFAEASMNTAYQKKWP-LYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRL-IDDM 255 (413)
Q Consensus 178 ~va~~~~~Tr~~~eRiar~AFe~A~~r~~~-Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~I~~~~~~-VD~~ 255 (413)
+++..|.--..-++-+++.|.++||..+.+ |.-.|+.- .-=++....|- .|=...+..++.+.-+- +|++
T Consensus 450 DIwRmcq~KD~pI~DWVkLAV~Rar~tg~paiFWLD~~R------AHDa~lI~kV~--~yL~~hdt~gldi~Im~P~~A~ 521 (735)
T PF03971_consen 450 DIWRMCQTKDAPIRDWVKLAVNRARATGTPAIFWLDENR------AHDAELIKKVE--KYLKDHDTSGLDIRIMSPVEAT 521 (735)
T ss_dssp -EEEEEEE-HHHHHHHHHHHHHHHHHHT--EEEE--TTS------HHHHHHHHHHH--HHHTTS--TT--EEEE-HHHHH
T ss_pred cchhhhcccCchHHHHHHHHHHHHHhhCCCeEEecCCCC------ccHHHHHHHHH--HHHHhcCCCCCceEeeCHHHHH
Confidence 455446666778999999999999999876 55555431 12234555552 35445566678888775 4444
Q ss_pred HHHH--HhCCCceEEEecCCchhhhhhhHhhh--cCCcccccccccCCCCceEEEcc-ccccccccccccc-cCCCCccC
Q 015124 256 VAYA--LKSEGGYVWACKNYDGDVQSDFLAQG--FGSLGLMTSVLVCPDGKTIEAEA-AHGTVTRHYRVHQ-KGGETSTN 329 (413)
Q Consensus 256 a~~L--v~~P~~FViv~~NlfGDILSDlaa~l--~GslGlapSanig~~~~~a~FEp-~HGSAp~~~~~di-aGk~i~AN 329 (413)
-.-| ++.-..-+-||.|..=|+|+||.--| .-|.=|+.=.=+=..| ++||. +.||||+|..+=+ .|.=. =+
T Consensus 522 ~~sler~r~G~dTISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLm~GG--GLFETGAGGSAPKHVqQf~eEnhLR-WD 598 (735)
T PF03971_consen 522 RFSLERIRAGKDTISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGG--GLFETGAGGSAPKHVQQFVEENHLR-WD 598 (735)
T ss_dssp HHHHHHHHTT---EEEE-HHHHHHHHHHHHHHHHS-STTSEEEEEBTTS---EEEES-SS---HHHHHHHCCCS------
T ss_pred HHHHHHHHcCCCeEEeechHHHhhhcchhhhhhhccchhhhhhhhcccCC--ceeccCCCCCccHHHHHHHHcCccc-cc
Confidence 3333 33444448899999999999998654 2332232221121233 89999 6899998885533 23333 78
Q ss_pred hHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC-CCCcch
Q 015124 330 SIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDL 377 (413)
Q Consensus 330 P~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dl 377 (413)
.+|-+|+.+--|+||+...+|++..-.|+.|.+|+.+.|+++ -..+-.
T Consensus 599 SLGEFlALa~Sle~l~~~~~n~ka~vLa~tLd~At~~~L~n~ksPsRkv 647 (735)
T PF03971_consen 599 SLGEFLALAVSLEHLAQKTGNPKAKVLADTLDAATGKFLENNKSPSRKV 647 (735)
T ss_dssp THHHHHHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHHHHTT-S--SST
T ss_pred chhhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhCCCCCCccC
Confidence 999999999999999998888888889999999999999886 334444
No 33
>TIGR00178 monomer_idh isocitrate dehydrogenase, NADP-dependent, monomeric type. The monomeric type of isocitrate dehydrogenase has been found so far in a small number of species, including Azotobacter vinelandii, Corynebacterium glutamicum, Rhodomicrobium vannielii, and Neisseria meningitidis. It is NADP-specific.
Probab=96.94 E-value=0.017 Score=61.94 Aligned_cols=189 Identities=13% Similarity=0.150 Sum_probs=124.6
Q ss_pred eEEEeecChHHHHHHHHHHHHHHHhCCCC-EEEEeCCCccccccHHHHHHHHHHHHhhccCccccCCeEEeeee-HHHHH
Q 015124 179 VALSMYNTDESIRAFAEASMNTAYQKKWP-LYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRL-IDDMV 256 (413)
Q Consensus 179 va~~~~~Tr~~~eRiar~AFe~A~~r~~~-Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~I~~~~~~-VD~~a 256 (413)
++..|---..-++-+++.|.++||..+-+ |.-.|+.-. - =++....|- .|=...+..++.+.-+- ++++-
T Consensus 455 IwRmcq~KD~pI~DWVkLAV~Rar~sg~pavFWLD~~Ra---H---Da~lI~kV~--~yL~~hdt~gldi~Im~p~~A~~ 526 (741)
T TIGR00178 455 IWRMCQVKDAPIQDWVKLAVTRARATGTPAVFWLDPARA---H---DAQLIKKVE--TYLKDHDTEGLDIQILSPVEATR 526 (741)
T ss_pred chhhhhccCchHHHHHHHHHHHHHhcCCCeEEEeCCCch---h---HHHHHHHHH--HHHHhcCCCCCceEeeCHHHHHH
Confidence 33334444567899999999999999876 444444311 1 133444442 23323344577777664 44443
Q ss_pred --HHHHhCCCceEEEecCCchhhhhhhHhhhc--CCcccccccccCCCCceEEEcc-ccccccccccccc-cCCCCccCh
Q 015124 257 --AYALKSEGGYVWACKNYDGDVQSDFLAQGF--GSLGLMTSVLVCPDGKTIEAEA-AHGTVTRHYRVHQ-KGGETSTNS 330 (413)
Q Consensus 257 --~~Lv~~P~~FViv~~NlfGDILSDlaa~l~--GslGlapSanig~~~~~a~FEp-~HGSAp~~~~~di-aGk~i~ANP 330 (413)
+.-+++-..-+-||.|..=|+|+||.--|- -|.=|+.=.=+=..| ++||. +.||||+|..+=+ .|.=. =+.
T Consensus 527 ~slerir~G~dTISVTGNVLRDYLTDLFPILElGTSAKMLSIVPLm~GG--GLFETGAGGSAPKHVqQf~eEnhLR-WDS 603 (741)
T TIGR00178 527 FSLARIRRGEDTISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMAGG--GLFETGAGGSAPKHVQQFLEENHLR-WDS 603 (741)
T ss_pred HHHHHHHcCCCeEEEechhHHhhhcchhhhhhhccchhhhhhhhcccCC--ceecCCCCCCccHHHHHHHHcCccc-ccc
Confidence 333445555588999999999999986553 221121111111133 79999 6899998875533 33334 789
Q ss_pred HHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC-CCCcchh
Q 015124 331 IASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLA 378 (413)
Q Consensus 331 ~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg 378 (413)
+|-+|+.+--|+||+...+|++..-.|+.|++|+.+.|+++ ...+-.|
T Consensus 604 LGEFlALa~Sle~la~~~~n~ka~vLa~tLd~At~k~L~n~ksPsRkvg 652 (741)
T TIGR00178 604 LGEFLALAASLEHLGNATGNPKALVLADTLDAATGKLLDNNKSPSRKVG 652 (741)
T ss_pred hhhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhCCCCCCcccC
Confidence 99999999999999998888888888999999999999876 3444443
No 34
>COG2838 Icd Monomeric isocitrate dehydrogenase [Energy production and conversion]
Probab=95.84 E-value=0.19 Score=53.10 Aligned_cols=180 Identities=17% Similarity=0.178 Sum_probs=114.5
Q ss_pred eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCccccCCeEEeee-eHHHHHH--HH
Q 015124 183 MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHR-LIDDMVA--YA 259 (413)
Q Consensus 183 ~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~I~~~~~-~VD~~a~--~L 259 (413)
|.....-++.+++.|.++||..+-++..---.+ +-.+. +....| + .|=..-+..++.+.-+ .+.+|-. ..
T Consensus 461 cq~kdapi~dWVkLaV~RarlS~~pavFWLDp~--Rahd~---~li~kV-~-~yLkdhdt~GldI~Ilsp~ea~~~sl~r 533 (744)
T COG2838 461 CQVKDAPIRDWVKLAVTRARLSGMPAVFWLDPY--RAHDK---ELIKKV-E-AYLKDHDTNGLDIQILSPVEAMRYSLER 533 (744)
T ss_pred HhcccchHHHHHHHHHHHHhhcCCceEEEeCcC--ccchH---HHHHHH-H-HHhhhcCCCCcceEEecHHHHHHHHHHH
Confidence 666677889999999999999887644322111 11222 333333 2 2322222235555444 3445433 33
Q ss_pred HhCCCceEEEecCCchhhhhhhHhhhc--CCcccccccccCCCCceEEEcc-ccccccccccccccCCCCccChHHHHHH
Q 015124 260 LKSEGGYVWACKNYDGDVQSDFLAQGF--GSLGLMTSVLVCPDGKTIEAEA-AHGTVTRHYRVHQKGGETSTNSIASIFA 336 (413)
Q Consensus 260 v~~P~~FViv~~NlfGDILSDlaa~l~--GslGlapSanig~~~~~a~FEp-~HGSAp~~~~~diaGk~i~ANP~A~IlS 336 (413)
+++-++-+-||.|..-|+|+||.--|- -|.-|..-.-+=..| +|||. +.||||+|..+=..---+-=+.+|-+|+
T Consensus 534 l~~G~DtIsvTGNvLRDYlTDLFPIlELGTSAKMLSiVPlmaGG--gmfETGAGGSAPKhVqQ~~eENhLRWDSLGEFLA 611 (744)
T COG2838 534 LRRGEDTISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMAGG--GMFETGAGGSAPKHVQQLVEENHLRWDSLGEFLA 611 (744)
T ss_pred HHcCCceeEecchHHHHHHhhhhhHhhcccccchheeeeeccCC--ceeecCCCCCCcHHHHHHHHhcccchhhHHHHHH
Confidence 445555588999999999999986653 111111111111233 79999 6799998774422211112678999999
Q ss_pred HHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC
Q 015124 337 WSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG 371 (413)
Q Consensus 337 ~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G 371 (413)
.+--|+|+|..-+|.+..-.|++|..|..+.+...
T Consensus 612 La~sle~~~~k~gn~kAkvLa~~LD~AtgklLdn~ 646 (744)
T COG2838 612 LAASLEHLGNKTGNAKAKVLAKALDAATGKLLDNN 646 (744)
T ss_pred HHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999988778777888999999999998764
No 35
>PF04166 PdxA: Pyridoxal phosphate biosynthetic protein PdxA; InterPro: IPR005255 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. In Escherichia coli, the pdx genes involved in vitamin B6 have been characterised [, , ]. This entry represents 4-hydroxythreonine-4-phosphate dehydrogenase (PdxA, 1.1.1.262 from EC). PdxA takes part in vitamin B6 biosynthesis, forming pyridoxine 5'-phosphate from 4-(phosphohydroxy)-L-threonine and 1-deoxy-D-xylulose-5-phosphate.; GO: 0050570 4-hydroxythreonine-4-phosphate dehydrogenase activity, 0051287 NAD binding, 0008615 pyridoxine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1YXO_A 1PS6_A 1PS7_C 1PTM_B 1R8K_B 2HI1_A 3LXY_A 3TSN_B.
Probab=93.17 E-value=0.064 Score=53.76 Aligned_cols=134 Identities=19% Similarity=0.081 Sum_probs=74.9
Q ss_pred eecChHHHHHHHHHHHHHHHhC-C--CCEEEEeCCCccccccHHHH-H-------HHHHHHHhhccCccccCCeEEe-ee
Q 015124 183 MYNTDESIRAFAEASMNTAYQK-K--WPLYLSTKNTILKKYDGRFK-D-------IFQEVYEANWKSKFEAAGIWYE-HR 250 (413)
Q Consensus 183 ~~~Tr~~~eRiar~AFe~A~~r-~--~~Vt~v~KaNVl~~t~glf~-~-------~~~eva~~eYp~~~~~~~I~~~-~~ 250 (413)
..+|.+.+.+.++...+.-++. + ++-..|-==|==..-.|+|= | .+++..+ . +|.+. ..
T Consensus 150 ~~it~~~i~~~i~~~~~~l~~~~gi~~PrIaV~gLNPHaGe~G~~G~EE~~~I~PAI~~~~~---~------gi~v~GP~ 220 (298)
T PF04166_consen 150 KLITKERILEKIRLLHKSLKRDFGIENPRIAVAGLNPHAGEGGLFGREEIEIIIPAIEEARA---E------GIDVFGPY 220 (298)
T ss_dssp HH--HHHHHHHHHHHHHHHHHTTT-SS-EEEEE-SSGGGGTTTTTBSHHHHTHHHHHHHHHH---T------THEEEEEE
T ss_pred HhcCHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCCCCCCcHhHHHHHHHHHHHHHh---C------CCceECCC
Confidence 6788888888888877666652 2 22222222232222234443 2 2332221 2 66655 56
Q ss_pred eHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCCCccC
Q 015124 251 LIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTN 329 (413)
Q Consensus 251 ~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~AN 329 (413)
--|++-.+- +-++| ++|+ || -|++-.=.-.+++--+.|+--.-..----|.||||- ||||||+ ||
T Consensus 221 paDt~F~~~--~~~~fD~vva--MY----HDQGlip~K~l~f~~gVnvTlGLP~iRTS~DHGTAf-----DIAGkg~-A~ 286 (298)
T PF04166_consen 221 PADTVFGKA--NRGKFDAVVA--MY----HDQGLIPFKLLGFDEGVNVTLGLPIIRTSPDHGTAF-----DIAGKGI-AD 286 (298)
T ss_dssp -HHHHTSHH--HHTT-SEEEE--SS----HHHHHHHHHHHCTTTSEEEEESSSSEEEEESS-S-C-----CGTTTTT-S-
T ss_pred ccHHhhhcc--hhccCCEEEE--ee----cccCccceeecccccceEEecCCCeeeecCCCCchh-----hhhCCCC-CC
Confidence 667764443 34566 5555 33 677766667777777788632210234468999999 9999999 99
Q ss_pred hHHHHHHHHH
Q 015124 330 SIASIFAWSR 339 (413)
Q Consensus 330 P~A~IlS~am 339 (413)
|.+|+.|.-+
T Consensus 287 ~~s~~~Ai~~ 296 (298)
T PF04166_consen 287 PSSMIEAIKL 296 (298)
T ss_dssp THHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 9999988754
No 36
>PRK03371 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase 2; Provisional
Probab=92.10 E-value=0.11 Score=52.60 Aligned_cols=140 Identities=14% Similarity=0.050 Sum_probs=83.1
Q ss_pred eecChHHHHHHHHHHHHHHHhCC--C-CE-EEEeCCCccccccHHH-HHHHHHHHH--hhccCccccCCeEEe-eeeHHH
Q 015124 183 MYNTDESIRAFAEASMNTAYQKK--W-PL-YLSTKNTILKKYDGRF-KDIFQEVYE--ANWKSKFEAAGIWYE-HRLIDD 254 (413)
Q Consensus 183 ~~~Tr~~~eRiar~AFe~A~~r~--~-~V-t~v~KaNVl~~t~glf-~~~~~eva~--~eYp~~~~~~~I~~~-~~~VD~ 254 (413)
..+|.+.+.+.++.+.+.-++-+ + |+ .+.-..+ ..-.|+| +|..+.+.- ++.. +.++.++ ..--|+
T Consensus 176 ~~it~e~i~~~i~~~~~~l~~~gi~~PrIaV~gLNPH--AGE~G~~G~EE~~iI~PAi~~~~----~~G~~v~GP~paDt 249 (326)
T PRK03371 176 DTLNTARVETVIGIADTFLKRVGYVKPRIAVAGVNPH--AGENGLFGDEEIRIVTPAIEAMR----AKGMDVYGPCPPDT 249 (326)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeeCCC--CCCCCCCcHHHHHHHHHHHHHHH----HCCCcccCCCCchh
Confidence 57888989888888777666333 2 32 2222222 2224666 443333210 0111 0133333 555566
Q ss_pred HHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCCCccChHHH
Q 015124 255 MVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIAS 333 (413)
Q Consensus 255 ~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~A~ 333 (413)
+-.+-.+ ++| ++|| | --|++--=.-.+++-.+.|+--.--.----|-||||- ||||||+ |||.+|
T Consensus 250 ~F~~~~~--~~~D~vva--M----YHDQGliP~K~l~F~~gVNvTlGLP~iRTS~DHGTAf-----DIAGkG~-A~~~S~ 315 (326)
T PRK03371 250 VFLQAYE--GQYDMVVA--M----YHDQGHIPLKLLGFYDGVNITAGLPFIRTSADHGTAF-----DIAWTGK-AKSESM 315 (326)
T ss_pred hcccccc--cCCCEEEE--c----cccccchhheecccccceEEecCCCeeEecCCCCchh-----hhhcCCc-CCHHHH
Confidence 5444333 567 6665 2 3577777777888888888742210223367899999 9999999 999999
Q ss_pred HHHHHHHHH
Q 015124 334 IFAWSRGLA 342 (413)
Q Consensus 334 IlS~ammL~ 342 (413)
+-|.-+..+
T Consensus 316 ~~Ai~lA~~ 324 (326)
T PRK03371 316 AVSIKLAMQ 324 (326)
T ss_pred HHHHHHHHH
Confidence 998766544
No 37
>PRK00232 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed
Probab=92.10 E-value=0.11 Score=52.81 Aligned_cols=137 Identities=16% Similarity=0.058 Sum_probs=83.4
Q ss_pred eecChHHHHHHHHHHHHHHHhCC--C-CEEEEeCCCccccccHHH-HHH-------HHHHHHhhccCccccCCeEEe-ee
Q 015124 183 MYNTDESIRAFAEASMNTAYQKK--W-PLYLSTKNTILKKYDGRF-KDI-------FQEVYEANWKSKFEAAGIWYE-HR 250 (413)
Q Consensus 183 ~~~Tr~~~eRiar~AFe~A~~r~--~-~Vt~v~KaNVl~~t~glf-~~~-------~~eva~~eYp~~~~~~~I~~~-~~ 250 (413)
..+|.+.+.+.++.+-+.-++.+ + |+-+ -==|==..-.|+| +|. .++..++ ++.++ ..
T Consensus 177 ~~it~e~i~~~i~~~~~~l~~~gi~~PrIaV-~gLNPHAGE~G~~G~EE~~iI~PAI~~~~~~---------G~~v~GP~ 246 (332)
T PRK00232 177 DAITPERLEEVIRILHADLRRKGIAEPRIAV-CGLNPHAGEGGHFGREEIDIIIPALEELRAE---------GINLVGPL 246 (332)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhCCCCCcEEE-EeeCCCCCCCCCCCHHHHHHHHHHHHHHHhC---------CCCcCCCC
Confidence 67889999988888888666333 2 3322 1122222223455 332 2222211 33333 55
Q ss_pred eHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCCCccC
Q 015124 251 LIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTN 329 (413)
Q Consensus 251 ~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~AN 329 (413)
--|++-.+-.+ ++| ++|| | --|++--=.-.+++-.+.|+--.--.----|-||||- ||||||+ ||
T Consensus 247 paDt~F~~~~~--~~~D~vva--M----YHDQGliP~K~l~F~~gVNvTlGLPiiRTS~DHGTAf-----DIAGkg~-A~ 312 (332)
T PRK00232 247 PADTLFQPAYL--GDADAVLA--M----YHDQGLPVLKYLGFGRGVNITLGLPFIRTSVDHGTAL-----DLAGKGI-AD 312 (332)
T ss_pred Cchhhcccccc--CCCCEEEE--C----cccccchhheecccCcceEEecCCCeeEeCCCCcchh-----hhhcCCC-CC
Confidence 55665444433 467 6665 2 3577766777778888888742210223367899999 9999999 99
Q ss_pred hHHHHHHHHHHHHH
Q 015124 330 SIASIFAWSRGLAH 343 (413)
Q Consensus 330 P~A~IlS~ammL~~ 343 (413)
|.+|+-|.-+..+.
T Consensus 313 ~~S~~~Ai~lA~~~ 326 (332)
T PRK00232 313 VGSFITALNLAIRM 326 (332)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998776654
No 38
>PRK03743 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Validated
Probab=91.90 E-value=0.12 Score=52.55 Aligned_cols=136 Identities=16% Similarity=0.128 Sum_probs=85.6
Q ss_pred eecChHHHHHHHHHHHHHHHhCCC---CE-EEEeCCCccccccHHH-HHH-------HHHHHHhhccCccccCCeEEe-e
Q 015124 183 MYNTDESIRAFAEASMNTAYQKKW---PL-YLSTKNTILKKYDGRF-KDI-------FQEVYEANWKSKFEAAGIWYE-H 249 (413)
Q Consensus 183 ~~~Tr~~~eRiar~AFe~A~~r~~---~V-t~v~KaNVl~~t~glf-~~~-------~~eva~~eYp~~~~~~~I~~~-~ 249 (413)
..+|.+.+.+.++.+.+.-++-+. |+ .+.-..+ ..-.|+| +|. +++..+ . ++.++ .
T Consensus 177 ~~it~e~i~~~i~~~~~~l~~~gi~~PrIaV~GLNPH--AGE~G~~G~EE~~iI~PAI~~~~~---~------g~~v~GP 245 (332)
T PRK03743 177 DYVTKERVLDYIQRCTKALEKLGIKNPKIAVAGLNPH--SGEHGLFGDEEVDEIIPAVEAAQE---M------GINVEGP 245 (332)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeeCCC--CCCCCCCcHHHHHHHHHHHHHHHH---C------CCcccCC
Confidence 678999999999998887774332 33 2222222 2223555 332 222221 1 34333 5
Q ss_pred eeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCCCcc
Q 015124 250 RLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETST 328 (413)
Q Consensus 250 ~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~A 328 (413)
+--|++-.+-.+ ++| ++|| | .-|++---.-.+++-.+.|+--.--.----|-||||- ||||||+ |
T Consensus 246 ~paDt~F~~~~~--~~~D~vva--M----YHDQGliP~K~l~F~~gVNvTlGLP~iRTS~DHGTAf-----DIAGkg~-A 311 (332)
T PRK03743 246 VPADSVFHLALQ--GRYDAVLS--L----YHDQGHIATKTLDFERTIAITNGLPFLRTSVDHGTAF-----DIAGTGK-A 311 (332)
T ss_pred CCchhhcccccc--cCCCEEEE--c----ccccCChhheecccCCceEEecCCCeeEeCCCCcchh-----hhhcCCC-C
Confidence 556665444433 457 6655 2 3577777777888888888742210223468899999 9999999 9
Q ss_pred ChHHHHHHHHHHHHH
Q 015124 329 NSIASIFAWSRGLAH 343 (413)
Q Consensus 329 NP~A~IlS~ammL~~ 343 (413)
||.+|+-|.-+..+.
T Consensus 312 ~~~S~~~Ai~lA~~~ 326 (332)
T PRK03743 312 SSVSMEEAILLAAKY 326 (332)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999998776655
No 39
>PRK03946 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional
Probab=91.63 E-value=0.14 Score=51.62 Aligned_cols=136 Identities=11% Similarity=0.005 Sum_probs=80.4
Q ss_pred eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHH-HH------HHHHHHHhhccCccccCCeEEe--eeeHH
Q 015124 183 MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRF-KD------IFQEVYEANWKSKFEAAGIWYE--HRLID 253 (413)
Q Consensus 183 ~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf-~~------~~~eva~~eYp~~~~~~~I~~~--~~~VD 253 (413)
..+|.+.+.+-++.+.+.-+ ..|=..+.-..+. .-.|+| +| ..++..++ . ++.+. ..--|
T Consensus 157 ~~it~~~i~~~i~~~~~~l~-~PrIaV~gLNPHA--GE~G~~G~EE~iI~PAi~~~~~~--~------g~~~~~GP~paD 225 (307)
T PRK03946 157 QLIKVKKLVKFLLDFYKSTK-FKKIGVLGLNPHA--GDNGVIGGEEEEIKKAIKKANQF--L------GFEIFFGPLVPD 225 (307)
T ss_pred HHhCHHHHHHHHHHHHHHhc-CCCEEEEeeCCCC--CCCCCCCcchHHHHHHHHHHHHh--c------CCCcccCCcCch
Confidence 67888888887777766543 2221222222222 122444 22 23332211 1 34444 66667
Q ss_pred HHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCC-CccChH
Q 015124 254 DMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGE-TSTNSI 331 (413)
Q Consensus 254 ~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~-i~ANP~ 331 (413)
++-.+-.+ ++| ++|| | --|++--=.-.+++-.+.|+--.--.----|-||||- |||||| + |||.
T Consensus 226 t~F~~~~~--~~~D~vla--M----YHDQGlip~K~l~F~~gVnvTlGLP~iRTSpDHGTAf-----DIAGkg~~-A~~~ 291 (307)
T PRK03946 226 SAFTPNKR--KKFNYYVA--M----YHDQGLAPLKALYFDESINVSLNLPILRTSVDHGTAF-----DIAYKNAK-ANTK 291 (307)
T ss_pred hhcccccc--cCCCEEEE--C----ccccCchhheeeccCcceEEecCCCEeEecCCCCchh-----hhcCCCCc-CCHH
Confidence 76544333 577 6666 3 3567766677778878888642210223368899999 999999 9 9999
Q ss_pred HHHHHHHHHHHH
Q 015124 332 ASIFAWSRGLAH 343 (413)
Q Consensus 332 A~IlS~ammL~~ 343 (413)
+|+-|.-+..+.
T Consensus 292 S~~~Ai~lA~~~ 303 (307)
T PRK03946 292 SYLNAIKYAINL 303 (307)
T ss_pred HHHHHHHHHHHH
Confidence 999988766554
No 40
>PRK01909 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Validated
Probab=91.55 E-value=0.14 Score=52.04 Aligned_cols=142 Identities=12% Similarity=-0.020 Sum_probs=86.0
Q ss_pred eecChHHHHHHHHHHHHHHHhC-C--C-CEEEEeCCCccccccHHH-HHHHHHHHH--hhccCccccCCeEE-eeeeHHH
Q 015124 183 MYNTDESIRAFAEASMNTAYQK-K--W-PLYLSTKNTILKKYDGRF-KDIFQEVYE--ANWKSKFEAAGIWY-EHRLIDD 254 (413)
Q Consensus 183 ~~~Tr~~~eRiar~AFe~A~~r-~--~-~Vt~v~KaNVl~~t~glf-~~~~~eva~--~eYp~~~~~~~I~~-~~~~VD~ 254 (413)
..+|.+.+.+.++.+.+.-++. + + |+-+. ==|==..-.|+| +|..+-+.- ++.. +.++.+ -..--|+
T Consensus 172 ~~it~e~i~~~i~l~~~~l~~~~gi~~PrIaV~-GLNPHAGE~G~~G~EE~~iI~PAi~~~~----~~Gi~v~GP~paDt 246 (329)
T PRK01909 172 AALTIDGLVETLAIIDRDLRRDFGLAAPRILVT-GLNPHAGENGYLGREEIDVIEPALARAR----AAGIDARGPYPADT 246 (329)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHhCCCCCCEEEE-eeCCCCCCCCCCcHHHHHHHHHHHHHHH----HCCCCccCCCCchh
Confidence 6789999999999988877633 3 2 33221 112222224566 443322210 0000 113433 2556666
Q ss_pred HHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCCCccChHHH
Q 015124 255 MVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIAS 333 (413)
Q Consensus 255 ~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~A~ 333 (413)
+-.+-.+ +.| ++|| | --|++---.-.+++-.+.|+--.--.----|-||||- ||||||+ |||.+|
T Consensus 247 ~F~~~~~--~~~D~vva--M----YHDQGliP~K~l~F~~gVNvTlGLP~iRTSvDHGTAf-----DIAGkg~-A~~~S~ 312 (329)
T PRK01909 247 LFQPRYL--EDADCVLA--M----FHDQGLPVLKYATFGEGINVTLGLPIIRTSVDHGTAL-----DLAGTGR-ADPGSM 312 (329)
T ss_pred hcccccc--cCCCEEEE--c----cccccchhheecccCcceEEecCCCeeEeCCCCcchh-----hhhcCCC-CCHHHH
Confidence 6554444 457 6665 2 3578777778888888888742210223467899999 9999999 999999
Q ss_pred HHHHHHHHHH
Q 015124 334 IFAWSRGLAH 343 (413)
Q Consensus 334 IlS~ammL~~ 343 (413)
+-|.-+..+.
T Consensus 313 ~~Ai~lA~~~ 322 (329)
T PRK01909 313 IAAIDTAVTM 322 (329)
T ss_pred HHHHHHHHHH
Confidence 9988766554
No 41
>PRK05312 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional
Probab=91.48 E-value=0.14 Score=52.11 Aligned_cols=142 Identities=18% Similarity=0.079 Sum_probs=83.5
Q ss_pred eecChHHHHHHHHHHHHHHHhC-C--C-CEEEEeCCCccccccHHH-HHHHHHHHH--hhccCccccCCeEE-eeeeHHH
Q 015124 183 MYNTDESIRAFAEASMNTAYQK-K--W-PLYLSTKNTILKKYDGRF-KDIFQEVYE--ANWKSKFEAAGIWY-EHRLIDD 254 (413)
Q Consensus 183 ~~~Tr~~~eRiar~AFe~A~~r-~--~-~Vt~v~KaNVl~~t~glf-~~~~~eva~--~eYp~~~~~~~I~~-~~~~VD~ 254 (413)
..+|.+.+.+.++.+.+.-++. + + |+-+. ==|==..-.|+| +|..+.+.- ++.. +.++.+ -..--|+
T Consensus 181 ~~it~e~i~~~i~l~~~~l~~~~gi~~PrIaV~-GLNPHAGE~G~~G~EE~~iI~PAI~~~~----~~Gi~v~GP~paDt 255 (336)
T PRK05312 181 AALTPELIVATARITAADLRRRFGIASPRLAVA-GLNPHAGEGGALGREDIDIIAPAIEQLR----AEGIDARGPLPADT 255 (336)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHcCCCCCCEEEE-eeCCCCCCCCCCcHHHHHHHHHHHHHHH----HCCCCccCCCCchh
Confidence 6789999999999988876633 3 1 33221 112222223555 332222210 0110 013432 2445566
Q ss_pred HHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCCCccChHHH
Q 015124 255 MVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIAS 333 (413)
Q Consensus 255 ~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~A~ 333 (413)
+-.+-.+ ++| ++|+ | --|++-.-.-.+++-.+.|+--.--.----|-||||- ||||||+ |||.+|
T Consensus 256 ~F~~~~~--~~~D~vva--M----YHDQGliP~K~l~F~~gVNvTlGLP~iRTSvDHGTAf-----DIAGkg~-A~~~S~ 321 (336)
T PRK05312 256 MFHAAAR--ATYDAAIC--M----YHDQALIPIKTLDFDGGVNVTLGLPFIRTSPDHGTAF-----DIAGKGI-ARPDSL 321 (336)
T ss_pred hcccccc--cCCCEEEE--c----ccccCChhheecccCcceEEecCCCeeEeCCCCcchh-----hhhcCCC-CCHHHH
Confidence 5444322 467 5555 2 3577777777788888888742210223367899999 9999999 999999
Q ss_pred HHHHHHHHHH
Q 015124 334 IFAWSRGLAH 343 (413)
Q Consensus 334 IlS~ammL~~ 343 (413)
+-|.-+..+.
T Consensus 322 ~~Ai~lA~~~ 331 (336)
T PRK05312 322 IAALRLAAQM 331 (336)
T ss_pred HHHHHHHHHH
Confidence 9998776654
No 42
>PRK02746 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional
Probab=91.35 E-value=0.15 Score=52.08 Aligned_cols=141 Identities=10% Similarity=-0.063 Sum_probs=85.8
Q ss_pred eecChHHHHHHHHHHHHHHHh-CC--C-CEEEEeCCCccccccHHH-HH-------HHHHHHHhhccCccccCCeEEe-e
Q 015124 183 MYNTDESIRAFAEASMNTAYQ-KK--W-PLYLSTKNTILKKYDGRF-KD-------IFQEVYEANWKSKFEAAGIWYE-H 249 (413)
Q Consensus 183 ~~~Tr~~~eRiar~AFe~A~~-r~--~-~Vt~v~KaNVl~~t~glf-~~-------~~~eva~~eYp~~~~~~~I~~~-~ 249 (413)
..+|.+.+.+-++.+.+.-++ -+ + ||-+. ==|==..-.|+| +| ++++..+ +-+ ++.+. .
T Consensus 179 ~~it~~~I~~~i~~~~~~l~~~~gi~~PrIaV~-GLNPHAGE~G~~G~EE~~iI~PAIe~~r~-~g~------g~~v~GP 250 (345)
T PRK02746 179 KTLTPELITSKLDLLIDFLQRDFGIEKPRIAIA-GLNPHAGEQGQLGTEEKDWLIPWLESWRQ-KNP------DIQLLGP 250 (345)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHcCCCCCcEEEE-eeCCCCCCCCCCcHHHHHHHHHHHHHHHh-cCC------CceeeCC
Confidence 678888888888887775553 22 2 33221 122222223455 33 2333222 222 34443 5
Q ss_pred eeHHHHHHHHHhC------CCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccccccccccccccc
Q 015124 250 RLIDDMVAYALKS------EGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQK 322 (413)
Q Consensus 250 ~~VD~~a~~Lv~~------P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~dia 322 (413)
.--|++-.+-.+. .+.| ++|| | --|++-.=.--+++-.+.|+--.--.----|-||||- |||
T Consensus 251 ~paDt~F~~~~~~~~~~~~~~~~D~vva--M----YHDQGliP~K~l~F~~gVNvTlGLP~iRTS~DHGTAf-----DIA 319 (345)
T PRK02746 251 IPPDTCWVSPAQAWYGKGVAEAPDGYLA--L----YHDQGLIPVKLMAFDRAVNTTIGLPFIRTSPDHGTAF-----DIA 319 (345)
T ss_pred CCchhhccccccccccccccCCCCEEEE--C----cccCCChhheeeccCcceEEecCCCeeEeCCCCcchh-----hhh
Confidence 5667765555442 2468 6666 3 3577777777888888888742210223367899999 999
Q ss_pred CCCCccChHHHHHHHHHHHHH
Q 015124 323 GGETSTNSIASIFAWSRGLAH 343 (413)
Q Consensus 323 Gk~i~ANP~A~IlS~ammL~~ 343 (413)
|||+ |||.+|+-|.-+..+.
T Consensus 320 Gkg~-A~~~S~~~Ai~lA~~l 339 (345)
T PRK02746 320 GKGI-ARPQSMKAAIKLAWEL 339 (345)
T ss_pred cCCC-CCHHHHHHHHHHHHHH
Confidence 9999 9999999998776554
No 43
>TIGR00557 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase. This model represents PdxA, an NAD+-dependent 4-hydroxythreonine 4-phosphate dehydrogenase (EC 1.1.1.262) active in pyridoxal phosphate biosynthesis.
Probab=91.21 E-value=0.16 Score=51.47 Aligned_cols=135 Identities=15% Similarity=0.038 Sum_probs=81.6
Q ss_pred eecChHHHHHHHHHHHHHHHhC-C--C-CE-EEEeCCCccccccHHH-HHH-------HHHHHHhhccCccccCCeEEe-
Q 015124 183 MYNTDESIRAFAEASMNTAYQK-K--W-PL-YLSTKNTILKKYDGRF-KDI-------FQEVYEANWKSKFEAAGIWYE- 248 (413)
Q Consensus 183 ~~~Tr~~~eRiar~AFe~A~~r-~--~-~V-t~v~KaNVl~~t~glf-~~~-------~~eva~~eYp~~~~~~~I~~~- 248 (413)
..+|.+.+.+-++.+.+.-++. + + |+ .+.-..+. .-.|+| +|. .++..++ ++.++
T Consensus 169 ~~it~~~i~~~i~~~~~~l~~~~gi~~PrIaV~gLNPHA--GE~G~~G~EE~~iI~PAI~~~~~~---------G~~v~G 237 (320)
T TIGR00557 169 AALTPELLVEKLRILHADLRRDFGIARPRIAVAGLNPHA--GEGGHLGREEIDIIIPALEALRAE---------GIDLIG 237 (320)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCC--CCCCCCcHHHHHHHHHHHHHHHHC---------CCcccC
Confidence 5588999999888888877643 3 2 33 22222222 123455 332 2222211 33332
Q ss_pred eeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCCCc
Q 015124 249 HRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETS 327 (413)
Q Consensus 249 ~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ 327 (413)
..--|++-.+-.+ ++| ++|| | .-|++-.=.-.+++-.+.|+--.--.----|-||||- ||||||+
T Consensus 238 P~paDt~F~~~~~--~~~D~vva--M----YHDQGliP~K~l~F~~gVNvTlGLPiiRTS~DHGTAf-----DIAGkg~- 303 (320)
T TIGR00557 238 PLPADTLFHPAAL--AKYDAVLA--M----YHDQGLIPLKYLGFDEGVNVTLGLPFIRTSPDHGTAF-----DIAGKGK- 303 (320)
T ss_pred CCCchhhcccccc--cCCCEEEE--C----cccccchhheecccCcceEEecCCCeeEeCCCCcchh-----hhhcCCC-
Confidence 4455655444322 567 6665 3 3577777777888888888742210223367899999 9999999
Q ss_pred cChHHHHHHHHHHHH
Q 015124 328 TNSIASIFAWSRGLA 342 (413)
Q Consensus 328 ANP~A~IlS~ammL~ 342 (413)
|||.+|+.|.-+..+
T Consensus 304 A~~~S~~~Ai~~A~~ 318 (320)
T TIGR00557 304 ADPGSLIAAIKLAIE 318 (320)
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999988766543
No 44
>COG1995 PdxA Pyridoxal phosphate biosynthesis protein [Coenzyme metabolism]
Probab=89.53 E-value=0.36 Score=48.81 Aligned_cols=59 Identities=20% Similarity=0.062 Sum_probs=43.9
Q ss_pred hhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCCCccChHHHHHHHHHHHHH
Q 015124 279 SDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAH 343 (413)
Q Consensus 279 SDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~ 343 (413)
-|++-.-.-=+|+--|.|+.-.--+----|-||||- ||||||+ |||.+++-|..+.-+.
T Consensus 267 HDQgliplK~l~Fd~~VNvtlGLPfiRTS~DHGTAf-----DiAgkGi-A~~~S~~~Ai~lA~~l 325 (332)
T COG1995 267 HDQGLIPLKYLGFDRGVNVTLGLPFIRTSVDHGTAF-----DIAGKGI-ADPGSLIAAIKLAAKL 325 (332)
T ss_pred ccccchhhhhhccccceEEecCCCeeeecCCccchh-----hhhcCCc-CCchHHHHHHHHHHHH
Confidence 466666667778888888753311234467899999 9999999 9999999887665544
No 45
>PRK03371 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase 2; Provisional
Probab=56.81 E-value=8.5 Score=39.25 Aligned_cols=22 Identities=14% Similarity=0.024 Sum_probs=19.1
Q ss_pred ccccEEEECCC--CccHHHHHHHH
Q 015124 8 VANPIVEMDGD--EMTRVFWKSIK 29 (413)
Q Consensus 8 m~~~I~vi~GD--GIGpEv~~~~~ 29 (413)
|.++|++-.|| ||||||+-.++
T Consensus 1 ~~~~iaIT~GDpaGIGpEii~ka~ 24 (326)
T PRK03371 1 MTKIIAVTMGDPAGIGPEIIIKSL 24 (326)
T ss_pred CCCcEEEeCCCCcchHHHHHHHHh
Confidence 67889999999 99999987664
No 46
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=49.80 E-value=2.2e+02 Score=26.58 Aligned_cols=101 Identities=15% Similarity=0.127 Sum_probs=70.0
Q ss_pred eEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCccccCCeEEee-eeHHHHH
Q 015124 179 VALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEH-RLIDDMV 256 (413)
Q Consensus 179 va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~I~~~~-~~VD~~a 256 (413)
+-.+ ....-+..+|++--|.+.|++. ..|.++|---=|+..+.-|++.++++.+.+=| =|..-| ...|-..
T Consensus 74 ~rvGkY~V~v~~le~i~~~al~rA~~~-aDvIIIDEIGpMElks~~f~~~ve~vl~~~kp------liatlHrrsr~P~v 146 (179)
T COG1618 74 PRVGKYGVNVEGLEEIAIPALRRALEE-ADVIIIDEIGPMELKSKKFREAVEEVLKSGKP------LIATLHRRSRHPLV 146 (179)
T ss_pred cccceEEeeHHHHHHHhHHHHHHHhhc-CCEEEEecccchhhccHHHHHHHHHHhcCCCc------EEEEEecccCChHH
Confidence 3455 5666788999999999999886 68999999999999999999999999874444 344444 3233333
Q ss_pred HHHHhCCCceEEEecCCchhhhhhhHhhhc
Q 015124 257 AYALKSEGGYVWACKNYDGDVQSDFLAQGF 286 (413)
Q Consensus 257 ~~Lv~~P~~FViv~~NlfGDILSDlaa~l~ 286 (413)
.++=+.+.-+|++++-=-+-|+..+.+.|-
T Consensus 147 ~~ik~~~~v~v~lt~~NR~~i~~~Il~~L~ 176 (179)
T COG1618 147 QRIKKLGGVYVFLTPENRNRILNEILSVLK 176 (179)
T ss_pred HHhhhcCCEEEEEccchhhHHHHHHHHHhc
Confidence 333233333354776555577777776654
No 47
>KOG1671 consensus Ubiquinol cytochrome c reductase, subunit RIP1 [Energy production and conversion]
Probab=48.86 E-value=9.6 Score=36.14 Aligned_cols=47 Identities=17% Similarity=0.015 Sum_probs=34.5
Q ss_pred HHhCCCceEEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCCC
Q 015124 259 ALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGET 326 (413)
Q Consensus 259 Lv~~P~~FViv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i 326 (413)
=|++|+.+|++ +++=-||..|-+|-|+.| +.|-|+|||-- |+.|+=.
T Consensus 140 rvk~~ewl~~i--------------gVCThLGCVp~~~AGd~g--g~~CPCHGSHY-----dasGRIr 186 (210)
T KOG1671|consen 140 RVKKPEWLVVI--------------GVCTHLGCVPIANAGDYG--GYYCPCHGSHY-----DASGRIR 186 (210)
T ss_pred hccCcceEEEE--------------eeeccccccccccccccC--ceecccccccc-----cccCcee
Confidence 35778888331 223346888999999887 79999999977 8888643
No 48
>PRK05312 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional
Probab=44.83 E-value=17 Score=37.19 Aligned_cols=22 Identities=14% Similarity=0.059 Sum_probs=18.2
Q ss_pred ccccEEEECCC--CccHHHHHHHH
Q 015124 8 VANPIVEMDGD--EMTRVFWKSIK 29 (413)
Q Consensus 8 m~~~I~vi~GD--GIGpEv~~~~~ 29 (413)
|..+|++-.|| ||||||+-.++
T Consensus 2 ~~p~iaIT~GDpaGIGpEii~ka~ 25 (336)
T PRK05312 2 MMRPLALSLGDPAGIGPEIALKAW 25 (336)
T ss_pred CCCeEEEeCCCCcchHHHHHHHHH
Confidence 34689999999 99999987664
No 49
>PRK00232 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed
Probab=44.51 E-value=18 Score=36.94 Aligned_cols=22 Identities=14% Similarity=0.129 Sum_probs=18.3
Q ss_pred ccccEEEECCC--CccHHHHHHHH
Q 015124 8 VANPIVEMDGD--EMTRVFWKSIK 29 (413)
Q Consensus 8 m~~~I~vi~GD--GIGpEv~~~~~ 29 (413)
|..+|++--|| ||||||+-.++
T Consensus 3 ~~p~iaIT~GDpaGIGpEIi~ka~ 26 (332)
T PRK00232 3 MKPRIAITPGDPAGIGPELVAKLL 26 (332)
T ss_pred CCCcEEEeCCCCcccHHHHHHHHH
Confidence 34679999999 99999987765
No 50
>PRK03743 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Validated
Probab=40.47 E-value=22 Score=36.38 Aligned_cols=20 Identities=15% Similarity=-0.082 Sum_probs=17.3
Q ss_pred ccEEEECCC--CccHHHHHHHH
Q 015124 10 NPIVEMDGD--EMTRVFWKSIK 29 (413)
Q Consensus 10 ~~I~vi~GD--GIGpEv~~~~~ 29 (413)
.+|++-.|| ||||||+-.++
T Consensus 4 p~iaIT~GDpaGIGpEii~ka~ 25 (332)
T PRK03743 4 PIIAIPIGDPAGIGPEIVVKTL 25 (332)
T ss_pred CeEEEeCCCCcchHHHHHHHHH
Confidence 579999999 99999987764
No 51
>PRK02746 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional
Probab=39.53 E-value=27 Score=35.90 Aligned_cols=23 Identities=9% Similarity=-0.078 Sum_probs=19.0
Q ss_pred eccccEEEECCC--CccHHHHHHHH
Q 015124 7 KVANPIVEMDGD--EMTRVFWKSIK 29 (413)
Q Consensus 7 ~m~~~I~vi~GD--GIGpEv~~~~~ 29 (413)
.|..+|++-.|| ||||||+-.++
T Consensus 7 ~~~p~IaIT~GDpaGIGPEii~ka~ 31 (345)
T PRK02746 7 DPRPRLAITLGDPAGIGPEVILKAL 31 (345)
T ss_pred CCCCcEEEeCCCCcchHHHHHHHHH
Confidence 344689999999 99999987765
No 52
>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed
Probab=38.27 E-value=1.6e+02 Score=33.47 Aligned_cols=98 Identities=10% Similarity=0.033 Sum_probs=64.6
Q ss_pred cChHHHHHHHHHHHHHHHhCCC--CEEEE---eCCCccccccHHHHHHHHHHHHhhccCccccCCeEEe-eeeHHHHHHH
Q 015124 185 NTDESIRAFAEASMNTAYQKKW--PLYLS---TKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYE-HRLIDDMVAY 258 (413)
Q Consensus 185 ~Tr~~~eRiar~AFe~A~~r~~--~Vt~v---~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~I~~~-~~~VD~~a~~ 258 (413)
-|-+..-.|+..|-++|+.-+. ||-+. ++-|.--.+...-++..+-+.+ .+| ++.++ ++.+|++.-.
T Consensus 601 PtaeqLa~IA~~aa~~ar~lGiePRVALLS~Sn~Gse~~k~~~~vreA~~llk~-~~~------~l~~dGemq~D~Al~~ 673 (752)
T PRK07232 601 PTAEELAEIALMAAEEVRRFGIEPRVALLSHSNFGSSDSPSARKMREAVELLRE-RAP------DLEVDGEMHGDAALNE 673 (752)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCeEEEEeccccCCCCCCcHHHHHHHHHHHHh-hCC------CcEEEEechHHHhCCH
Confidence 3556667788888899987664 67777 5555433344456666665543 688 77777 6677877432
Q ss_pred HH---hCCCc-e-----EEEecCCc-hhhhhhhHhhhcCCc
Q 015124 259 AL---KSEGG-Y-----VWACKNYD-GDVQSDFLAQGFGSL 289 (413)
Q Consensus 259 Lv---~~P~~-F-----Viv~~Nlf-GDILSDlaa~l~Gsl 289 (413)
-+ +-|.. . |+|.||+. |+|+--+.-.+.|+-
T Consensus 674 ~va~~K~p~s~vaG~ANVLIfPdLeaGNI~yKllq~l~g~~ 714 (752)
T PRK07232 674 EIRKDLYPFSRLKGPANVLVMPNLEAANISYNLLKELGGGV 714 (752)
T ss_pred HHHHhhCCCCccCCcCCEEEeCCchhhHHHHHHHHHhcCCe
Confidence 22 33322 1 99999996 999998887776653
No 53
>PRK12861 malic enzyme; Reviewed
Probab=37.86 E-value=2.1e+02 Score=32.70 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=62.5
Q ss_pred cChHHHHHHHHHHHHHHHhCCC--CEEEEeCCCc---cccccHHHHHHHHHHHHhhccCccccCCeEEe-eeeHHHHHHH
Q 015124 185 NTDESIRAFAEASMNTAYQKKW--PLYLSTKNTI---LKKYDGRFKDIFQEVYEANWKSKFEAAGIWYE-HRLIDDMVAY 258 (413)
Q Consensus 185 ~Tr~~~eRiar~AFe~A~~r~~--~Vt~v~KaNV---l~~t~glf~~~~~eva~~eYp~~~~~~~I~~~-~~~VD~~a~~ 258 (413)
-|-+....|+..|.++|+.-+. ||-+..=+|. -..+....+++.+-+ +..+| ++.++ ++..|++.-.
T Consensus 610 P~aeqla~Ia~~aa~~ak~lGiePkVAlLS~St~GS~~~~~~~km~eA~~l~-~~~~p------d~~vdGemq~DaAl~~ 682 (764)
T PRK12861 610 PDAEQIAEFTIAAARQMEWLNLTPKVALLSRSNFGSGSAASGVKMRRALEIV-REQAP------DLEADGEMHGDCALDE 682 (764)
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCCeEEEEeccccCCCCCCchhHHHHHHHHH-HhhCC------CcEEEecCcHHHhCCH
Confidence 3455566677788888887664 5655542332 222335677777754 44689 77776 6677866432
Q ss_pred HH---hCCCc-e-----EEEecCC-chhhhhhhHhhhcCC
Q 015124 259 AL---KSEGG-Y-----VWACKNY-DGDVQSDFLAQGFGS 288 (413)
Q Consensus 259 Lv---~~P~~-F-----Viv~~Nl-fGDILSDlaa~l~Gs 288 (413)
-+ +-|.. + |+|+||+ =|+|+-.+.-.+.|+
T Consensus 683 e~a~~K~p~s~vaG~ANVLVfPnLeAGNI~yKll~~l~g~ 722 (764)
T PRK12861 683 GLRARLLPMSPLKGAANLLVCPNVDAGNIAYNLLKTEAGS 722 (764)
T ss_pred HHHHhcCCCCcCCCcCCEEEECCcchhhHHHHHHHHHcCC
Confidence 22 23332 2 9999999 899999988887764
No 54
>PRK03946 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional
Probab=34.54 E-value=24 Score=35.70 Aligned_cols=19 Identities=16% Similarity=-0.036 Sum_probs=16.3
Q ss_pred ccEEEECCC--CccHHHHHHH
Q 015124 10 NPIVEMDGD--EMTRVFWKSI 28 (413)
Q Consensus 10 ~~I~vi~GD--GIGpEv~~~~ 28 (413)
.+|++-.|| ||||||+-.+
T Consensus 2 p~iaiT~GDpaGIGpEii~ka 22 (307)
T PRK03946 2 KKIAISIGDINGIGLEIALKS 22 (307)
T ss_pred CeEEEcCCCCcccHHHHHHHh
Confidence 478999999 9999998766
No 55
>COG0655 WrbA Multimeric flavodoxin WrbA [General function prediction only]
Probab=33.31 E-value=2.1e+02 Score=26.55 Aligned_cols=82 Identities=10% Similarity=0.003 Sum_probs=52.1
Q ss_pred cEEEECC-CCccHHHHHHHHHHHhcCCCceEEEEEe-c---Cchhh----hccCCCCCHH----HHHHHHhCCeeEEccc
Q 015124 11 PIVEMDG-DEMTRVFWKSIKDKLIFPFLELDIKYFD-L---GLPNR----DATDDKVTVE----SAEATLKYNVAIKCAT 77 (413)
Q Consensus 11 ~I~vi~G-DGIGpEv~~~~~~v~~~~~~~i~~~~~~-~---g~~~~----~~~g~~lp~~----~~~ai~~~~v~lkg~~ 77 (413)
.|...|= +|-.-.+.+++++-+.+.|..++..... . ++... .+....++++ ..+.++++|++++|.
T Consensus 5 ~I~gs~r~~G~t~~l~~~~~~g~~~~G~E~~~i~v~~~~i~~c~~c~~c~~~~~c~~~dD~~~~i~~~l~~aD~iI~gs- 83 (207)
T COG0655 5 GINGSPRSNGNTAKLAEAVLEGAEEAGAEVEIIRLPEKNIKPCTGCFACWKKKPCVIKDDDMNEIYEKLLEADGIIFGS- 83 (207)
T ss_pred EEEecCCCCCcHHHHHHHHHHHHHHcCCEEEEEEecCCCcccchHHHhhhccCCCCCCcccHHHHHHHHHHCCEEEEeC-
Confidence 3444444 8999999999999887778877766543 2 22222 2122555544 555699999999865
Q ss_pred CCCcchhhHHHHhhccCCCcchhhhhhcC
Q 015124 78 ITPDEARVKEFVLKQMWKSPNGTIRNILN 106 (413)
Q Consensus 78 ~~p~~~~~~~~~~~~~~~s~~~~LRk~ld 106 (413)
|.+ +..+..+|+.-+|
T Consensus 84 --Pvy-----------~g~vsa~~K~fiD 99 (207)
T COG0655 84 --PVY-----------FGNVSAQMKAFID 99 (207)
T ss_pred --Cee-----------cCCchHHHHHHHh
Confidence 553 2233456777777
No 56
>COG1995 PdxA Pyridoxal phosphate biosynthesis protein [Coenzyme metabolism]
Probab=31.75 E-value=35 Score=34.85 Aligned_cols=16 Identities=19% Similarity=0.096 Sum_probs=14.3
Q ss_pred ccEEEECCC--CccHHHH
Q 015124 10 NPIVEMDGD--EMTRVFW 25 (413)
Q Consensus 10 ~~I~vi~GD--GIGpEv~ 25 (413)
.+|++-.|| ||||||+
T Consensus 4 ~~iAit~GDPaGIGPEi~ 21 (332)
T COG1995 4 PRIAITMGDPAGIGPELV 21 (332)
T ss_pred CceEecCCCcccCCHHHH
Confidence 579999999 9999993
No 57
>PRK12862 malic enzyme; Reviewed
Probab=31.46 E-value=3e+02 Score=31.46 Aligned_cols=112 Identities=11% Similarity=0.086 Sum_probs=69.7
Q ss_pred EeecChHHHHHHHHHHHHHHHhCCC--CEEEEeCCCcc---ccccHHHHHHHHHHHHhhccCccccCCeEEe-eeeHHHH
Q 015124 182 SMYNTDESIRAFAEASMNTAYQKKW--PLYLSTKNTIL---KKYDGRFKDIFQEVYEANWKSKFEAAGIWYE-HRLIDDM 255 (413)
Q Consensus 182 ~~~~Tr~~~eRiar~AFe~A~~r~~--~Vt~v~KaNVl---~~t~glf~~~~~eva~~eYp~~~~~~~I~~~-~~~VD~~ 255 (413)
....|.+...+|++.+.+++++-+. ||-+..-+|.- ......-++.++.+.+ ++| ++.++ ++-.|++
T Consensus 606 n~~pt~e~La~ia~~aa~~ar~~GIePRVAvLshs~~Gs~~~ee~~~i~pAiellr~-~~~------g~~VdGPl~aDtA 678 (763)
T PRK12862 606 NEDPTAEELAEITILAAEEVRRFGIEPKVALLSHSNFGSSDSPSARKMREALEILRE-RAP------DLEVDGEMHGDAA 678 (763)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcccccCCCCCchHHHHHHHHHHHHh-cCC------CcEEEcCCCHHHH
Confidence 3456788899999999999997653 56666333332 2233456666766644 788 77776 6777887
Q ss_pred HHHHHh---CC-----Cce-EEEecCCc-hhhhhhhHhhhcCCcccccccccCCC
Q 015124 256 VAYALK---SE-----GGY-VWACKNYD-GDVQSDFLAQGFGSLGLMTSVLVCPD 300 (413)
Q Consensus 256 a~~Lv~---~P-----~~F-Viv~~Nlf-GDILSDlaa~l~GslGlapSanig~~ 300 (413)
.-.-+. -| +.| |+|++|+. |+|.--+...+.|+--.+.+..+|-+
T Consensus 679 f~~~~~~~K~~~s~vaG~aDvLV~P~~DqGNI~~Kll~f~~gvn~tlGpil~G~~ 733 (763)
T PRK12862 679 LDEELRDRIFPDSRLEGEANLLVFPNLDAANIAYNLLKTAAGNGLAVGPILLGAA 733 (763)
T ss_pred cCHHHHhhcCCCCccCCCCCEEEecChhHhhHHHHHHHHhccCceEecceeccCC
Confidence 544222 22 235 99999997 78877776665543212333444433
No 58
>TIGR00651 pta phosphate acetyltransferase. Model contains a gene from E.coli coding for ethanolamine utilization protein (euti) and also contains similarity to malate oxidoreductases
Probab=30.10 E-value=2.6e+02 Score=28.12 Aligned_cols=102 Identities=13% Similarity=0.075 Sum_probs=61.6
Q ss_pred EEEeecChHHHHHHHHHHHHHHHhCC-C--CEEEE---eCCCccccccHHHHHHHHHHHHhhccCccccCCeEEe-eeeH
Q 015124 180 ALSMYNTDESIRAFAEASMNTAYQKK-W--PLYLS---TKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYE-HRLI 252 (413)
Q Consensus 180 a~~~~~Tr~~~eRiar~AFe~A~~r~-~--~Vt~v---~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~I~~~-~~~V 252 (413)
+..-.-|-+..-.|+..|-++|+.-+ . ||-+. +|-|---.+....++.+.-+ ++++| ++.++ ++-+
T Consensus 151 ~vn~~P~~e~l~~ia~~a~~~a~~lg~~~PkVAlLs~S~~gs~~~~~~~kv~eA~~l~-~~~~~------~~~vdG~l~~ 223 (303)
T TIGR00651 151 AVNPDPNAEQLAEIAIQSAKSAKSFGEIEPKVALLSYSTKGSGSGEDVEKVREATRIA-KEKRP------DLTIDGELQF 223 (303)
T ss_pred eeeCCCCHHHHHHHHHHHHHHHHHhCCCCCEEEEEeccCCCCCCCCccHHHHHHHHHH-hccCC------CeEEEecCch
Confidence 33323355666778889999998765 2 44443 33343222344566666544 44688 77776 5566
Q ss_pred HHHHHHH---HhCCCc-e-----EEEecCCc-hhhhhhhHhhhcCC
Q 015124 253 DDMVAYA---LKSEGG-Y-----VWACKNYD-GDVQSDFLAQGFGS 288 (413)
Q Consensus 253 D~~a~~L---v~~P~~-F-----Viv~~Nlf-GDILSDlaa~l~Gs 288 (413)
|++.-.= .+-|.. + |+|+||++ |+|+--+.-.+.|+
T Consensus 224 D~Al~~~~a~~K~~~s~v~G~AdvLV~Pnl~aGNi~~K~~~~~~~~ 269 (303)
T TIGR00651 224 DAAFVEKVAEKKAPNSPVAGSANVFVFPDLDAGNIGYKIVQRLGDA 269 (303)
T ss_pred hhhCCHHHHHhhCCCCccCCcCCEEEeCCchHHHHHHHHHHHhcCC
Confidence 7763221 233432 2 99999998 78877776666444
No 59
>COG0391 Uncharacterized conserved protein [Function unknown]
Probab=29.09 E-value=1.3e+02 Score=30.79 Aligned_cols=52 Identities=10% Similarity=0.082 Sum_probs=29.6
Q ss_pred CCHHHHHHHHhCCeeEEcccCCCcchhhHHHHhhccCCCcchhhhhhcCceEEeeee
Q 015124 58 VTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPI 114 (413)
Q Consensus 58 lp~~~~~ai~~~~v~lkg~~~~p~~~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv 114 (413)
-+++++++|+++|.++.||- +|----.|.+ ....+--+||+.---.+.+.|+
T Consensus 179 a~~eaveAI~~AD~IviGPg-Sl~TSIlP~L----llp~I~eaLr~~~ap~i~v~n~ 230 (323)
T COG0391 179 AAPEAVEAIKEADLIVIGPG-SLFTSILPIL----LLPGIAEALRETVAPIVYVCNL 230 (323)
T ss_pred CCHHHHHHHHhCCEEEEcCC-ccHhhhchhh----chhHHHHHHHhCCCCEEEeccC
Confidence 34589999999999999994 2210001111 0111224677755555566665
No 60
>PRK01909 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Validated
Probab=29.00 E-value=43 Score=34.23 Aligned_cols=20 Identities=10% Similarity=-0.039 Sum_probs=17.3
Q ss_pred ccEEEECCC--CccHHHHHHHH
Q 015124 10 NPIVEMDGD--EMTRVFWKSIK 29 (413)
Q Consensus 10 ~~I~vi~GD--GIGpEv~~~~~ 29 (413)
.+|++-.|| ||||||+-.++
T Consensus 6 p~iaIT~GDpaGIGpEii~kal 27 (329)
T PRK01909 6 LQIAITTGEPAGVGPELTVRAL 27 (329)
T ss_pred CeEEEeCCCCcchHHHHHHHHH
Confidence 478999999 99999987775
No 61
>TIGR00557 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase. This model represents PdxA, an NAD+-dependent 4-hydroxythreonine 4-phosphate dehydrogenase (EC 1.1.1.262) active in pyridoxal phosphate biosynthesis.
Probab=27.23 E-value=48 Score=33.76 Aligned_cols=20 Identities=15% Similarity=-0.014 Sum_probs=16.2
Q ss_pred cEEEECCC--CccHHHHHHHHH
Q 015124 11 PIVEMDGD--EMTRVFWKSIKD 30 (413)
Q Consensus 11 ~I~vi~GD--GIGpEv~~~~~~ 30 (413)
+|++-.|| ||||||+-.++.
T Consensus 1 ~iaIT~GDp~GIGpEii~ka~~ 22 (320)
T TIGR00557 1 RIAITLGDPAGIGPEIILKALA 22 (320)
T ss_pred CEEEecCCCcchHHHHHHHHHh
Confidence 57888899 999999876653
No 62
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=27.21 E-value=1.3e+02 Score=23.75 Aligned_cols=32 Identities=13% Similarity=0.156 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHH
Q 015124 190 IRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQE 230 (413)
Q Consensus 190 ~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~e 230 (413)
..++++.|+++|++++.||.. ++.+-...+++
T Consensus 40 a~~L~~~~l~~a~~~~~kv~p---------~C~y~~~~~~~ 71 (78)
T PF14542_consen 40 AKKLVEAALDYARENGLKVVP---------TCSYVAKYFRR 71 (78)
T ss_dssp HHHHHHHHHHHHHHTT-EEEE---------TSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEE---------ECHHHHHHHHh
Confidence 578999999999999988874 56566655544
No 63
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA [] reveals an alpha/beta fold similar to that of the Methanocaldococcus jannaschii (Methanococcus jannaschii) MJ0577 protein, which binds ATP [], though UspA lacks ATP-binding activity.; GO: 0006950 response to stress; PDB: 3DLO_C 3QTB_A 2PFS_A 3TNJ_A 1JMV_D 3FH0_B 3FDX_B 3AB7_A 3AB8_A 2GM3_F ....
Probab=26.16 E-value=72 Score=25.79 Aligned_cols=26 Identities=15% Similarity=0.052 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEe
Q 015124 187 DESIRAFAEASMNTAYQKKWPLYLST 212 (413)
Q Consensus 187 r~~~eRiar~AFe~A~~r~~~Vt~v~ 212 (413)
.+.+++.+++|+++|+..+-+|+++|
T Consensus 12 ~~~~~~al~~a~~la~~~~~~i~~l~ 37 (140)
T PF00582_consen 12 SEESRRALRFALELAKRSGAEITLLH 37 (140)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHHHHHHHHHHHHHHHhhCCeEEEEE
Confidence 45677999999999999887766654
No 64
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=25.89 E-value=1.1e+02 Score=31.05 Aligned_cols=44 Identities=16% Similarity=0.239 Sum_probs=31.1
Q ss_pred HHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCccccCCeEEeeeeHH
Q 015124 195 EASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLID 253 (413)
Q Consensus 195 r~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~I~~~~~~VD 253 (413)
.||+|+|+ ||.+|.++- + |..-..++..|+.+ +|+ +++....+|
T Consensus 64 ayA~eLAk-rG~nvvLIs-----R-t~~KL~~v~kEI~~-~~~-------vev~~i~~D 107 (312)
T KOG1014|consen 64 AYARELAK-RGFNVVLIS-----R-TQEKLEAVAKEIEE-KYK-------VEVRIIAID 107 (312)
T ss_pred HHHHHHHH-cCCEEEEEe-----C-CHHHHHHHHHHHHH-HhC-------cEEEEEEEe
Confidence 37899998 787888765 2 55667778888876 676 555555555
No 65
>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=24.87 E-value=2.9e+02 Score=28.64 Aligned_cols=110 Identities=18% Similarity=0.096 Sum_probs=67.8
Q ss_pred CCcceEEe--eeceeeecCCCCcccceeeecccCCCceEEEeecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccc
Q 015124 144 NLNWCLVI--SLSVFDVPEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYD 221 (413)
Q Consensus 144 ~~iD~viv--nteG~Y~g~~~~~~~~~~~~~~~~~~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~ 221 (413)
..-|+++| ||-..-.|.+ .+.|-+-.|-+...++|+..+ +..=.+|.|++|--.+-
T Consensus 77 ~eadlvfisvntptkt~g~g---------------kg~aadlky~es~ar~ia~~s-------~~~kivvekstvpv~aa 134 (481)
T KOG2666|consen 77 KEADLVFISVNTPTKTYGLG---------------KGKAADLKYWESAARMIADVS-------VSDKIVVEKSTVPVKAA 134 (481)
T ss_pred hhcceEEEEecCCcccccCC---------------CCcccchhHHHHHHHHHHHhc-------cCCeEEEeeccccchHH
Confidence 46788877 7644444432 234455444466667777664 33345689999865343
Q ss_pred HHHHHHHHHHHHhhccCccccCCeEEe-----eeeHHHHHHHHHhCCCce----------------------------EE
Q 015124 222 GRFKDIFQEVYEANWKSKFEAAGIWYE-----HRLIDDMVAYALKSEGGY----------------------------VW 268 (413)
Q Consensus 222 glf~~~~~eva~~eYp~~~~~~~I~~~-----~~~VD~~a~~Lv~~P~~F----------------------------Vi 268 (413)
.--..++ ..+-| +|++. +.+..-.+++=+.||.+. -|
T Consensus 135 esi~~il----~~n~~------~i~fqilsnpeflaegtaikdl~npdrvligg~etpeg~~av~~l~~vyehwvp~~~i 204 (481)
T KOG2666|consen 135 ESIEKIL----NHNSK------GIKFQILSNPEFLAEGTAIKDLFNPDRVLIGGRETPEGFQAVQALKDVYEHWVPREQI 204 (481)
T ss_pred HHHHHHH----hcCCC------CceeEeccChHHhcccchhhhhcCCceEEECCCCChhHHHHHHHHHHHHHhhCcccce
Confidence 3333333 32356 77776 345555566666777653 28
Q ss_pred EecCCchhhhhhhHhhh
Q 015124 269 ACKNYDGDVQSDFLAQG 285 (413)
Q Consensus 269 v~~NlfGDILSDlaa~l 285 (413)
+|+|++-.=||-|+|.-
T Consensus 205 ittntwsselsklaana 221 (481)
T KOG2666|consen 205 ITTNTWSSELSKLAANA 221 (481)
T ss_pred eeccccHHHHHHHHHHH
Confidence 99999999999998653
No 66
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=24.57 E-value=89 Score=32.88 Aligned_cols=76 Identities=14% Similarity=0.077 Sum_probs=43.1
Q ss_pred hhhhhhHhhhcCCcccccccccCCCCceEEEcc-ccccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhH
Q 015124 276 DVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEA-AHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLL 354 (413)
Q Consensus 276 DILSDlaa~l~GslGlapSanig~~~~~a~FEp-~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~ 354 (413)
||++ ++=+|.|| +-=||-+..+..-..|+| .|||.. | -||+||--+.+ -|+.+-+-+..++..
T Consensus 247 DI~t-laK~LgGG--~PigA~la~~~~~~~~~~G~HgSTf--------G----GNpLacAv~~a-~l~~l~~e~ll~~v~ 310 (404)
T COG4992 247 DILT-LAKALGGG--FPIGAMLATEEIASAFTPGDHGSTF--------G----GNPLACAVALA-VLEVLLEEGLLENVR 310 (404)
T ss_pred CEEE-eeccccCC--ccceeeEEchhhhhcCCCCcccCCC--------C----cCHHHHHHHHH-HHHHHcchhHHHHHH
Confidence 6665 67788888 444666664311246888 799976 5 69999865543 455554322222233
Q ss_pred HHHHHHHHHHHHH
Q 015124 355 DFTEKLEAACIGT 367 (413)
Q Consensus 355 ~~A~~i~~Av~~~ 367 (413)
+.++.+.+.+.+.
T Consensus 311 ~~g~~~~~~L~~l 323 (404)
T COG4992 311 EKGEYLLQRLREL 323 (404)
T ss_pred HHHHHHHHHHHHH
Confidence 3344444444443
No 67
>COG0538 Icd Isocitrate dehydrogenases [Energy production and conversion]
Probab=24.38 E-value=23 Score=36.85 Aligned_cols=26 Identities=8% Similarity=-0.171 Sum_probs=18.4
Q ss_pred cCC-CcchhhhHHHHHhhhcccCCcceEE
Q 015124 123 IPG-MLLVINIEQLIQLFKDLANLNWCLV 150 (413)
Q Consensus 123 ~pg-~~~pl~~~r~~~~~~~~~~~iD~vi 150 (413)
.|+ +..|+++.| ||++|.|.++|+..
T Consensus 131 vk~pe~~dmVIfR--enteDiYagiE~~~ 157 (407)
T COG0538 131 VKRPEKVDMVIFR--ENTEDIYAGIEWKA 157 (407)
T ss_pred CCCcccCCeEEEe--ccccchhheeeecc
Confidence 345 557777777 88888888877653
No 68
>PRK09653 eutD phosphotransacetylase; Reviewed
Probab=22.61 E-value=4.5e+02 Score=26.54 Aligned_cols=106 Identities=14% Similarity=0.073 Sum_probs=63.9
Q ss_pred ChHHHHHHHHHHHHHHHhCCC--CEEEE---eCCCc-cccccHHHHHHHHHHHHhhccCccccCCeEEe-eeeHHHHHHH
Q 015124 186 TDESIRAFAEASMNTAYQKKW--PLYLS---TKNTI-LKKYDGRFKDIFQEVYEANWKSKFEAAGIWYE-HRLIDDMVAY 258 (413)
Q Consensus 186 Tr~~~eRiar~AFe~A~~r~~--~Vt~v---~KaNV-l~~t~glf~~~~~eva~~eYp~~~~~~~I~~~-~~~VD~~a~~ 258 (413)
|-+..-.|+..|-++|+.-+. ||-+. +|-|- .+ +...-++.++-+ ++.+| ++.++ ++..|++.-.
T Consensus 173 ~~e~l~~ia~~a~~~ar~lG~~PkVAlLs~s~~Gs~~~~-~~~~~~ea~~ll-~~~~~------~~~vdGel~~D~A~~~ 244 (324)
T PRK09653 173 TAEQLAEIAINSAETAKAFGIDPKVAMLSFSTKGSAKGP-EVDKVQEATEIA-KELAP------DLKIDGELQFDAAFVP 244 (324)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEeccccCCCCCC-cHHHHHHHHHHH-HhhCC------CCeEEecchHHHhCCH
Confidence 456677788888999987653 44444 33332 33 444667777655 44689 77776 6777877322
Q ss_pred -H--HhCCCc-e-----EEEecCCc-hhhhhhhHhhhcCCcccccccccCCC
Q 015124 259 -A--LKSEGG-Y-----VWACKNYD-GDVQSDFLAQGFGSLGLMTSVLVCPD 300 (413)
Q Consensus 259 -L--v~~P~~-F-----Viv~~Nlf-GDILSDlaa~l~GslGlapSanig~~ 300 (413)
+ .+-|.. . |+|.||+. |+|+--+.-.+.|+. .+...-+|-+
T Consensus 245 ~~~~~k~~~s~v~G~AnvLi~P~l~agNi~yK~l~~~~~~~-~~Gpil~G~~ 295 (324)
T PRK09653 245 EVAAKKAPGSPVAGKANVFVFPSLEAGNIGYKIAQRLGGFE-AVGPILQGLN 295 (324)
T ss_pred HHHHhhCCCCccCCcCCEEEcCChHHhHHHHHHHHHhcCCe-EechHHhCCC
Confidence 1 233422 2 99999997 788777766665442 2233344544
No 69
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea . Na+/H+ exchange proteins eject protons from cells, effectively eliminating excess acid from actively metabolising cells. Na+ /H+ exchange activity is also crucial for the regulation of cell volume, and for the reabsorption of NaCl across renal, intestinal, and other epithelia. These antiports exchange Na+ for H+ in an electroneutral manner, and this activity is carried out by a family of Na+ /H+ exchangers, or NHEs, which are known to be present in both prokaryotic and eukaryotic cells. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N-terminus and a large cytoplasmic region at the C-terminus. The transmembrane regions M3-M12 share identity wit h other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the regio
Probab=22.31 E-value=1.1e+02 Score=25.18 Aligned_cols=28 Identities=11% Similarity=0.000 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEeCCC
Q 015124 188 ESIRAFAEASMNTAYQKKWPLYLSTKNT 215 (413)
Q Consensus 188 ~~~eRiar~AFe~A~~r~~~Vt~v~KaN 215 (413)
+.+++++++|+.+|++.+-+|+++|=.+
T Consensus 10 ~~~~~~l~~a~~la~~~~~~v~ll~v~~ 37 (132)
T cd01988 10 NTARDLLELAAALARAQNGEIIPLNVIE 37 (132)
T ss_pred hhHHHHHHHHHHHhhcCCCeEEEEEEEe
Confidence 4688999999999998777777666433
Done!