Query 015124
Match_columns 413
No_of_seqs 142 out of 1130
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 07:07:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015124.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015124hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3us8_A Isocitrate dehydrogenas 100.0 3E-111 1E-115 862.2 27.1 386 2-410 23-426 (427)
2 1lwd_A Isocitrate dehydrogenas 100.0 2E-110 6E-115 856.4 29.2 406 2-411 1-412 (413)
3 2qfy_A Isocitrate dehydrogenas 100.0 4E-110 1E-114 856.2 26.3 404 3-411 16-425 (427)
4 1zor_A Isocitrate dehydrogenas 100.0 2E-108 7E-113 838.3 29.4 392 3-409 1-399 (399)
5 2uxq_A Isocitrate dehydrogenas 100.0 9E-109 3E-113 841.3 25.1 378 5-406 2-398 (402)
6 3flk_A Tartrate dehydrogenase/ 100.0 4E-107 1E-111 817.7 29.5 347 8-406 4-361 (364)
7 4aoy_A Isocitrate dehydrogenas 100.0 2E-107 6E-112 829.6 27.1 380 3-406 1-399 (402)
8 3udu_A 3-isopropylmalate dehyd 100.0 2E-107 8E-112 817.2 27.6 340 10-407 7-357 (361)
9 3u1h_A 3-isopropylmalate dehyd 100.0 6E-107 2E-111 818.8 31.0 347 7-407 21-378 (390)
10 1x0l_A Homoisocitrate dehydrog 100.0 4E-106 1E-110 801.9 33.0 325 10-406 2-331 (333)
11 2y3z_A 3-isopropylmalate dehyd 100.0 2E-106 6E-111 810.9 30.2 337 10-409 4-351 (359)
12 3vmk_A 3-isopropylmalate dehyd 100.0 4E-106 2E-110 811.3 29.3 350 8-406 12-372 (375)
13 1cnz_A IPMDH, IMDH, protein (3 100.0 1E-105 4E-110 807.4 30.1 343 10-406 5-360 (363)
14 3r8w_A 3-isopropylmalate dehyd 100.0 4E-106 1E-110 816.8 27.1 352 7-412 40-404 (405)
15 3ty4_A Probable homoisocitrate 100.0 2E-104 5E-109 797.9 31.1 330 9-406 10-365 (366)
16 1a05_A IPMDH, IMDH, 3-isopropy 100.0 4E-105 1E-109 802.4 26.7 344 10-407 2-356 (358)
17 1wpw_A 3-isopropylmalate dehyd 100.0 2E-104 6E-109 791.0 30.3 325 10-405 2-335 (336)
18 1vlc_A 3-isopropylmalate dehyd 100.0 7E-105 2E-109 800.4 26.7 338 10-406 13-363 (366)
19 3dms_A Isocitrate dehydrogenas 100.0 5E-104 2E-108 809.1 30.1 353 8-405 35-426 (427)
20 3blx_B Isocitrate dehydrogenas 100.0 3E-104 9E-109 793.8 25.9 324 9-405 21-354 (354)
21 2e0c_A 409AA long hypothetical 100.0 2E-103 7E-108 801.7 32.5 351 10-406 25-407 (409)
22 2d1c_A Isocitrate dehydrogenas 100.0 1E-103 4E-108 812.6 30.6 341 2-409 8-359 (496)
23 2iv0_A Isocitrate dehydrogenas 100.0 1E-103 5E-108 803.1 29.5 351 10-406 28-410 (412)
24 3blx_A Isocitrate dehydrogenas 100.0 2E-103 6E-108 786.4 25.2 324 9-406 17-347 (349)
25 1w0d_A 3-isopropylmalate dehyd 100.0 1E-102 3E-107 779.2 27.4 330 10-405 2-337 (337)
26 2d4v_A Isocitrate dehydrogenas 100.0 2E-102 8E-107 796.9 30.7 349 10-405 27-429 (429)
27 1hqs_A Isocitrate dehydrogenas 100.0 1E-102 5E-107 798.0 28.7 350 10-405 20-422 (423)
28 1tyo_A Isocitrate dehydrogenas 100.0 5E-102 2E-106 795.8 30.5 351 10-406 36-422 (435)
29 1itw_A Isocitrate dehydrogenas 97.3 0.0033 1.1E-07 65.7 14.9 190 178-378 454-652 (741)
30 2b0t_A NADP isocitrate dehydro 97.3 0.0039 1.3E-07 65.1 14.9 191 177-378 449-648 (738)
31 1yxo_A 4-hydroxythreonine-4-ph 92.3 0.078 2.7E-06 52.4 3.6 138 183-343 173-323 (328)
32 4aty_A Terephthalate 1,2-CIS-d 92.3 0.073 2.5E-06 53.0 3.3 133 183-342 195-340 (349)
33 2hi1_A 4-hydroxythreonine-4-ph 92.3 0.077 2.6E-06 52.5 3.5 136 183-342 180-328 (330)
34 3lxy_A 4-hydroxythreonine-4-ph 92.2 0.079 2.7E-06 52.5 3.4 137 183-343 178-328 (334)
35 3tsn_A 4-hydroxythreonine-4-ph 90.7 0.13 4.6E-06 51.4 3.3 80 249-342 281-362 (367)
36 3us8_A Isocitrate dehydrogenas 76.7 0.47 1.6E-05 48.4 -0.2 30 127-158 148-179 (427)
37 2uxq_A Isocitrate dehydrogenas 64.0 1.2 4.2E-05 45.0 -0.4 36 123-160 120-165 (402)
38 1yxo_A 4-hydroxythreonine-4-ph 47.6 10 0.00034 37.3 2.9 21 8-28 1-23 (328)
39 2hi1_A 4-hydroxythreonine-4-ph 44.6 12 0.00043 36.7 3.1 20 10-29 7-28 (330)
40 3lxy_A 4-hydroxythreonine-4-ph 39.6 14 0.00048 36.4 2.5 25 2-28 3-29 (334)
41 1lwd_A Isocitrate dehydrogenas 36.5 9.8 0.00034 38.5 0.9 18 145-162 126-145 (413)
42 4aty_A Terephthalate 1,2-CIS-d 35.1 23 0.00079 34.8 3.3 21 10-30 9-31 (349)
43 3tsn_A 4-hydroxythreonine-4-ph 32.6 19 0.00066 35.9 2.3 19 10-28 5-25 (367)
44 1zor_A Isocitrate dehydrogenas 27.7 15 0.00052 36.9 0.6 17 145-161 125-143 (399)
45 1e2b_A Enzyme IIB-cellobiose; 23.1 2.4E+02 0.0083 22.3 7.0 55 10-77 4-59 (106)
46 3s3t_A Nucleotide-binding prot 21.4 62 0.0021 25.9 3.1 26 188-213 16-41 (146)
47 3u7r_A NADPH-dependent FMN red 21.1 2.3E+02 0.0077 24.9 7.0 83 8-107 1-92 (190)
48 2af4_C Phosphate acetyltransfe 20.5 2.8E+02 0.0096 26.6 8.1 95 184-285 177-288 (333)
49 3hgm_A Universal stress protei 20.2 69 0.0023 25.6 3.1 26 188-213 13-38 (147)
No 1
>3us8_A Isocitrate dehydrogenase [NADP]; PSI-biology, structural genomics; 2.25A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.5e-111 Score=862.19 Aligned_cols=386 Identities=65% Similarity=1.030 Sum_probs=338.1
Q ss_pred CccceeccccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCc
Q 015124 2 AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPD 81 (413)
Q Consensus 2 ~~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~ 81 (413)
.|+||||++||++|||||||||||++++++|.+++++|+|+++++|+++++++|+++|++++++|+++|++||||++||.
T Consensus 23 ~~~~i~~~~~I~vipGDGIGpEI~~~~~~vL~~~~~~i~~~~~~~G~~~~~~tg~~lp~etl~aik~~da~LkGav~tP~ 102 (427)
T 3us8_A 23 MMAKIKVANPVVELDGDEMTRIIWQFIKDKLIHPYLDLDLEYYDLGVENRDATDDQVTIDAANAIKKHGVGVKCATITPD 102 (427)
T ss_dssp --CCEECCSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCC
T ss_pred ccccccccceEEEEcCCcccHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeec
Q 015124 82 EARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVP 159 (413)
Q Consensus 82 ~~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g 159 (413)
+.+++++.++..|+|+|++||++||||+|+|||.++++ ++|+. ..++|+||| ||||+|+|
T Consensus 103 ~~~~~e~~l~~~~~s~n~~LRk~LdlyanvRPv~~~~i-------p~~~~-----------~~~~DivIvREnteg~Y~g 164 (427)
T 3us8_A 103 EGRVEEFKLKKMWKSPNGTIRNILGGVIFREPIICKNV-------PRLVP-----------GWTKPIIVGRHAFGDQYRA 164 (427)
T ss_dssp HHHHHHHTCSSCCCCHHHHHHHHHCSEEEEEECCCTTS-------CCSST-----------TCCSCEEEEEECSSGGGGC
T ss_pred ccccccccccccccCchHHHHHHhCCeEEecceeccCC-------CCCCC-----------CCCCCEEEEEeCCCCccCC
Confidence 87777766777899999999999999999999944433 33321 125898888 79999988
Q ss_pred CCCCccc----------------ceeeecccCCCceEEEeecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHH
Q 015124 160 EGKDEKT----------------ELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGR 223 (413)
Q Consensus 160 ~~~~~~~----------------~~~~~~~~~~~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~gl 223 (413)
.++.... +..+.++.+ .+++..++|||++++||+|+||+||++|++|||+|||+|||+.||||
T Consensus 165 ~e~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~-~~va~~~~~T~~~~eRiar~AFe~A~~r~kkVt~v~KaNIlk~tdgl 243 (427)
T 3us8_A 165 TDFKFPGKGKLSIKFVGEDGQTIEHDVYDAPG-AGVALAMYNLDESITEFARASFNYGLQRKVPVYLSTKNTILKAYDGR 243 (427)
T ss_dssp EEEEECSSEEEEEEEEETTSCEEEEEEEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHH
T ss_pred ceeEEecCCcceeeeeccccccccccccccCC-CcEEEEEeeCHHHHHHHHHHHHHHHHHcCCcEEEEECcccchhhhhH
Confidence 7542110 011111222 45664488999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCccccCCeEEeeeeHHHHHHHHHhCCCceEEEecCCchhhhhhhHhhhcCCcccccccccCCCCce
Q 015124 224 FKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKT 303 (413)
Q Consensus 224 f~~~~~eva~~eYp~~~~~~~I~~~~~~VD~~a~~Lv~~P~~FViv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~ 303 (413)
||++|+|||+++||++|.+.+|+++|+|||+||||||++|++|||||+|||||||||++|+++|||||+||+|||+++.+
T Consensus 244 fr~~~~eva~~eYp~~~~~~~I~~~~~~VD~~~mqlv~~P~~FVivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~~~ 323 (427)
T 3us8_A 244 FKDIFQKVFDEEFAAQFKAEKLWYEHRLIDDMVASALKWSGGYVWACKNYDGDVQSDIVAQGFGSLGLMTSVLMTPDGKT 323 (427)
T ss_dssp HHHHHHHHHHHHTHHHHHHTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHSCTTSEEEEEECTTSCC
T ss_pred HHHHHHHHHHHhCccccCCCCeEEEEEEHHHHHHHHhhCCCCcEEEeCCcCCcHHHHHHHHhcCChhhCceeEECCCCCe
Confidence 99999999976799888878999999999999999999999999999999999999999999999999999999988634
Q ss_pred EEEccccccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcC
Q 015124 304 IEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHG 383 (413)
Q Consensus 304 a~FEp~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G 383 (413)
+||||+|||||+|+++||||||++|||+|+|||++|||+|||+++.++++.++|++|++||.+|+++|++|+|||+.. +
T Consensus 324 a~fEp~HGSAPd~~~~~iAGk~i~ANP~A~IlS~ammL~hlG~~~~~~~l~~~A~~Ie~Av~~~l~~g~~T~Dlgg~~-~ 402 (427)
T 3us8_A 324 VEAEAAHGTVTRHYRQHQKGEETSTNSIASIFAWTRGLAHRAKLDGNAELAKFSETLERVCVDTVESGFMTKDLALLI-G 402 (427)
T ss_dssp EEEECCSCCCHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCBHHHHHHH-C
T ss_pred EEEeCCCCCcCCccchhcCCCCceeCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCCcCccccccc-c
Confidence 999999999998888889999988999999999999999999988888889999999999999999999999998311 0
Q ss_pred CcCCCccccCHHHHHHHHHHHHHHHhh
Q 015124 384 SKMTREHYLNTEEFIDAVADDLRARLS 410 (413)
Q Consensus 384 ~~~~~~~~~sT~e~~daV~~~l~~~~~ 410 (413)
+..+.++|+||+|+|+++|+++|.
T Consensus 403 ---~~~~~~~T~e~~daV~~~l~~~l~ 426 (427)
T 3us8_A 403 ---PDQPWLSTTGFLDKIDENLRKAMA 426 (427)
T ss_dssp ---TTCCCBCHHHHHHHHHHHHHHHC-
T ss_pred ---cCCcccCHHHHHHHHHHHHHHHhc
Confidence 012369999999999999988774
No 2
>1lwd_A Isocitrate dehydrogenase; tricarboxylic acid cycle, oxidoreductase, NADP; HET: ICT; 1.85A {Sus scrofa} SCOP: c.77.1.1 PDB: 1t0l_A* 1t09_A* 3mas_B* 3map_A* 3mar_A* 3mas_A* 3inm_A* 2cmj_A* 2cmv_A*
Probab=100.00 E-value=1.8e-110 Score=856.36 Aligned_cols=406 Identities=65% Similarity=1.050 Sum_probs=351.1
Q ss_pred CccceeccccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCc
Q 015124 2 AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPD 81 (413)
Q Consensus 2 ~~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~ 81 (413)
|.+||||++||++|||||||||||++++++|+.++++|+|+++++|+++++++|+++|++++++|+++|++||||++||.
T Consensus 1 ~~~~i~~~~~i~~l~GDgiGpei~~~~~~vl~~~~~~~~~~~~~~G~~~~~~~g~~lp~etl~~ik~~da~LkGav~tP~ 80 (413)
T 1lwd_A 1 ADQRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPD 80 (413)
T ss_dssp CCCCEECSSCEEEEECCHHHHHHHHHHHHHTTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCC
T ss_pred CCCcceecccEEEecCCChhHHHHHHHHHHHHhCCCCeEEEEEecCHHHHhccCCcCcHHHHHHHHHCCEEEECCccCCC
Confidence 45899999999999999999999999999999889999999999999999999999999999999999999999999998
Q ss_pred chhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--ee-ceeee
Q 015124 82 EARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SL-SVFDV 158 (413)
Q Consensus 82 ~~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nt-eG~Y~ 158 (413)
+..+|+..+.++|+|+|++||++||||+|+|||+++++++++|+++.|+.+.| |++++.|.++|++++ ++ ++.|.
T Consensus 81 ~~~~~~~~~~~~~~s~~l~LR~~ldlyan~RPv~~~~~~~~~~~~~~divIvR--e~t~g~Y~g~d~~~~~e~~~~~~~~ 158 (413)
T 1lwd_A 81 EARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGR--HAHGDQYKATDFVVDRAGTFKIVFT 158 (413)
T ss_dssp HHHHHHHTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCSCEEEEE--ECSSGGGGCEEEEECSSEEEEEEEE
T ss_pred cccCccccccccccCccHHHHHhcCCEEEEeeeeccCCCCCCCCCCCceEEEe--cccCCccCCceeEeccCCcceeeEe
Confidence 76666643445789999999999999999999988888877787777777777 888888888888877 44 56676
Q ss_pred cCCCCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcc
Q 015124 159 PEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWK 237 (413)
Q Consensus 159 g~~~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp 237 (413)
+.++....++.++++. .+.+.. .+||+++++||+|+||+||++|++|||+|||+|||+.|+|||+++|+|||+++||
T Consensus 159 ~~~g~~~~~~~~~~~~--~~~~~~~~~~T~~~~eRiar~AFe~A~~r~~kVt~v~KaNVlk~sdglf~~~~~eva~~eyp 236 (413)
T 1lwd_A 159 PKDGSSAKQWEVYNFP--AGGVGMGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYK 236 (413)
T ss_dssp ETTCCCCEEEEEEEES--SCEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTH
T ss_pred ccCCcccccccccccC--CCcEEEEEEEcHHHHHHHHHHHHHHHHHhCCceEEEECCcchhhHHHHHHHHHHHHHHHhCC
Confidence 5433111122222111 234555 9999999999999999999999889999999999999999999999999943899
Q ss_pred CccccCCeEEeeeeHHHHHHHHHhCCCceEEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccc
Q 015124 238 SKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHY 317 (413)
Q Consensus 238 ~~~~~~~I~~~~~~VD~~a~~Lv~~P~~FViv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~ 317 (413)
++|.+++|+++|+|||+||||||++|++|||||+|||||||||++|+++|||||+||+|||+++.++||||+|||||+++
T Consensus 237 d~~~~~~I~~~~~~VD~~~mqlv~~P~~FVivt~NlfGDILSD~aA~l~GslGl~pSanig~~~~~~~fEpvHGSAPdi~ 316 (413)
T 1lwd_A 237 TDFDKYKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHY 316 (413)
T ss_dssp HHHHHTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECCSCCCHHHH
T ss_pred CcccCCeEEEEEEEHHHHHHHHhcCCCceEEEecccccchHHHHHHhhcCCccccccceeCCCCCceEEeCCCCChhhhh
Confidence 88888889999999999999999999999999999999999999999999999999999999863389999999999777
Q ss_pred cccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCC-cCCC-ccccCHH
Q 015124 318 RVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGS-KMTR-EHYLNTE 395 (413)
Q Consensus 318 ~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~-~~~~-~~~~sT~ 395 (413)
+++|||||++|||+|+|||++|||+|||+.+.++++.++|++|++||.+|+++|++|+|||...+|. ...+ ++.+||+
T Consensus 317 ~~~~aGk~~~ANP~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~~~~T~ 396 (413)
T 1lwd_A 317 REHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTS 396 (413)
T ss_dssp HHHHTTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHCTTSCCBTTTBCCHH
T ss_pred hhhhcCCCCccChHHHHHHHHHHHHHcCCccccchhHHHHHHHHHHHHHHHHcCCcCcccccccCCcccccccCCCCCHH
Confidence 7777999966999999999999999999887777788999999999999999999999997311131 0011 1268999
Q ss_pred HHHHHHHHHHHHHhhc
Q 015124 396 EFIDAVADDLRARLSG 411 (413)
Q Consensus 396 e~~daV~~~l~~~~~~ 411 (413)
||+|+|+++|+++|.+
T Consensus 397 e~~daV~~~l~~~~~~ 412 (413)
T 1lwd_A 397 DFLDTIKSNLDRALGR 412 (413)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999887764
No 3
>2qfy_A Isocitrate dehydrogenase [NADP]; rossmann fold, oxidoreductase; HET: AKG; 2.10A {Saccharomyces cerevisiae} PDB: 2qfw_A* 2qfx_A* 2qfv_A*
Probab=100.00 E-value=4.1e-110 Score=856.23 Aligned_cols=404 Identities=62% Similarity=0.950 Sum_probs=354.0
Q ss_pred ccceeccccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcc
Q 015124 3 FQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (413)
Q Consensus 3 ~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~ 82 (413)
++||+|.+||++||||||||||++++.+.++.++++|+|+++++|+++++++|+++|++++++|+++|++||||++||..
T Consensus 16 ~~k~~~~~~I~~l~GDgig~evl~~~~~~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~et~~ai~~~da~lkGav~tP~~ 95 (427)
T 2qfy_A 16 FSKIKVKQPVVELDGDEMTRIIWDKIKKKLILPYLDVDLKYYDLSVESRDATSDKITQDAAEAIKKYGVGIKCATITPDE 95 (427)
T ss_dssp CCCEECSSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCH
T ss_pred cccccceeeEEEecCCCHHHHHHHHHHHHhccCCCceEEEEEecChHHHhccCCcCcHHHHHHHHHCCEEEECCcCCCCC
Confidence 57999999999999999999999999998888899999999999999999999999999999999999999999999986
Q ss_pred hhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecC
Q 015124 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPE 160 (413)
Q Consensus 83 ~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~ 160 (413)
..+++.++.++|+|+|++||+.||||+|+||+++.|+|+++|||++|+.+.| |++++.|.++|++|| ||||+|+..
T Consensus 96 ~~~~e~~l~~~~~s~~~~lR~~ldlyan~RP~~~~~~~~l~~g~~~pl~i~R--~~~g~~y~~~D~vivREnteg~Y~~~ 173 (427)
T 2qfy_A 96 ARVKEFNLHKMWKSPNGTIRNILGGTVFREPIVIPRIPRLVPRWEKPIIIGR--HAHGDQYKATDTLIPGPGSLELVYKP 173 (427)
T ss_dssp HHHHHTTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCEEEEEEE--ECSSGGGGCEEEEECSSEEEEEEEEE
T ss_pred cccchhhhcccccchHHHHHHhcCCEEEecccccccchhhccCCCCCeeEee--cccCCccCCeeEEEeccCccceeeec
Confidence 5444434455799999999999999999999999888899999999987778 888888999999999 899999932
Q ss_pred C---CCcccceeeecccCCCceEEEeecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcc
Q 015124 161 G---KDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWK 237 (413)
Q Consensus 161 ~---~~~~~~~~~~~~~~~~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp 237 (413)
+ |....++.+.++.+ .++++..++||++++||+|+||+||++|++|||+|||+|||+.|+||||++|+|||+++||
T Consensus 174 e~teG~~~~~~~~~~~~~-~~v~~~~~~T~~~ieRIar~AFe~A~~r~~kVt~v~KaNVlk~s~glfr~v~~eva~~eYp 252 (427)
T 2qfy_A 174 SDPTTAQPQTLKVYDYKG-SGVAMAMYNTDESIEGFAHSSFKLAIDKKLNLFLSTKNTILKKYDGRFKDIFQEVYEAQYK 252 (427)
T ss_dssp SCTTTSCCEEEEEEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTH
T ss_pred cccCCccccccccccCCC-ceEEEEEEEcHHHHHHHHHHHHHHHHHhCCceEEEECCccchhhhHHHHHHHHHHHHHhCC
Confidence 1 11111122111112 3455558899999999999999999999999999999999999999999999999833899
Q ss_pred CccccCCeEEeeeeHHHHHHHHHhCCCceEEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccc
Q 015124 238 SKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHY 317 (413)
Q Consensus 238 ~~~~~~~I~~~~~~VD~~a~~Lv~~P~~FViv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~ 317 (413)
++|++++|+++|+|||+||||||++|++|||||+|||||||||++|+++|||||+||+|||+++..++|||+||||||++
T Consensus 253 d~~~~~~I~~e~~~VD~~amqlV~~P~~FVivt~NlfGDILSD~aA~l~GslGl~pSanig~~~~~~~fEpvHGSAPdi~ 332 (427)
T 2qfy_A 253 SKFEQLGIHYEHRLIDDMVAQMIKSKGGFIMALKNYDGDVQSDIVAQGFGSLGLMTSILVTPDGKTFESEAAHGTVTRHY 332 (427)
T ss_dssp HHHHHHTCCEEEEEHHHHHHHHHHSCEEEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSCCEEEECCSCCCHHHH
T ss_pred CcccCCeEEEEEEEHHHHHHHHHhCCCceEEEECccchHHHHHHHHHhcCcccccceeEeCCCCceeEecCCCCCccccc
Confidence 77777779999999999999999999999999999999999999999999999999999998862389999999999999
Q ss_pred cccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHh-cCCCCcchhhhhcCCcCCCccccCHHH
Q 015124 318 RVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVE-SGKMTKDLALIIHGSKMTREHYLNTEE 396 (413)
Q Consensus 318 ~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~-~G~~T~Dlg~~~~G~~~~~~~~~sT~e 396 (413)
++||||||++|||+|+|||++|||+|||+++.++++.++|++|++||.+|++ +|++|+|||+.. |+ .++.+.+||+|
T Consensus 333 ~~diAGk~~~ANP~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~~G~~T~Dlgg~~-g~-~~~~~~~~T~e 410 (427)
T 2qfy_A 333 RKYQKGEETSTNSIASIFAWSRGLLKRGELDNTPALCKFANILESATLNTVQQDGIMTKDLALAC-GN-NERSAYVTTEE 410 (427)
T ss_dssp HHHHTTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHT-TC-CSGGGCCCHHH
T ss_pred chhhcCCCCccCcHHHHHHHHHHHHHhCcccCcchhHHHHHHHHHHHHHHHHhCCCccccccccC-Cc-cccCCCCCHHH
Confidence 9999999944999999999999999999987778888999999999999999 999999997311 21 01112479999
Q ss_pred HHHHHHHHHHHHhhc
Q 015124 397 FIDAVADDLRARLSG 411 (413)
Q Consensus 397 ~~daV~~~l~~~~~~ 411 (413)
|+|+|+++|+++|.+
T Consensus 411 ~~daV~~~l~~~l~~ 425 (427)
T 2qfy_A 411 FLDAVEKRLQKEIKS 425 (427)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999877754
No 4
>1zor_A Isocitrate dehydrogenase; wild type enzyme, CIS-proline, thermostable, oxidoreductase; 2.24A {Thermotoga maritima}
Probab=100.00 E-value=2.1e-108 Score=838.34 Aligned_cols=392 Identities=50% Similarity=0.798 Sum_probs=343.8
Q ss_pred ccceeccccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcc
Q 015124 3 FQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (413)
Q Consensus 3 ~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~ 82 (413)
|+||||++||++|||||||||||++++++|++++++|+|+++++|+++++++|+++|++++++|+++|++||||++||.+
T Consensus 1 ~~~~~~~~~I~~l~GDgiG~ei~~~v~~~l~~~~~~~~~~~~~~G~~~~~~~g~~lp~etl~~ik~~da~lkGav~tP~~ 80 (399)
T 1zor_A 1 MEKVKVKNPIVELDGDEMARVMWKMIKEKLILPYLDIQLVYFDLGIKKRDETDDQITIEAAKAIKKYGVGVKCATITPDA 80 (399)
T ss_dssp CCCEECCSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCH
T ss_pred CCcccccccEEEecCCcccHHHHHHHHHHHHhCCCCeEEEEEeCCHHHHhccCCcCcHHHHHHHHHCCEEEEcCccCCCc
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred hhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--ee-ceeeec
Q 015124 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SL-SVFDVP 159 (413)
Q Consensus 83 ~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nt-eG~Y~g 159 (413)
..+|+..+.++|+|+|++||++||||+|+|||+++++++.+|+++.|+.+.| |+++|.|.++|++++ || |+.|.+
T Consensus 81 ~~~~~~~~~~~~~s~~l~LR~~ldlyan~RPv~~~~~~~~~~~~~~divi~R--e~t~g~Y~g~d~~~~~e~t~~~~y~~ 158 (399)
T 1zor_A 81 ERVKEYNLKKAWKSPNATIRAYLDGTVFRKPIMVKNVPPLVKRWKKPIIIGR--HAYGDIYNAVEAKVEGPAEVELVVRN 158 (399)
T ss_dssp HHHHHHTCSSCCCCHHHHHHHHHTCEEEEEECCBTTBCCSBTTCCSCCEEEE--CCSSGGGGCEEEEECSSEEEEEEEES
T ss_pred ccCccccccccccCchHHHHHHhCCEEEEEEeecCCCCCcccCcCccceeee--cccCCCcCCceeEecCCCcceeeEec
Confidence 5556543445789999999999999999999988888888888888888888 999999999998888 55 678876
Q ss_pred CCCCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHh---h
Q 015124 160 EGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEA---N 235 (413)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~---e 235 (413)
.. ..++.++++. .+.+.. .++|+++++||+|+||+||++|++|||+|||+|||+.|+|||+++|+|||++ +
T Consensus 159 e~---~~~~~~~~~~--~~~~~~~~~~T~~~~eRiar~AFe~A~~r~~kVt~v~KaNvlk~sdglf~~~~~eva~~~~~~ 233 (399)
T 1zor_A 159 KE---NKTLLVHKFE--GNGVVMAMHNLEKSIRSFAQSCINYAISEKVDIWFATKDTISKVYHAYFKDIFQEEVDKRKEE 233 (399)
T ss_dssp SS---CEEEEEEEES--SCEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTCTTHHHHHHHHHHHHHHHTHHH
T ss_pred cc---cccceeeccC--CceEEEEEEecHHHHHHHHHHHHHHHHHhCCeEEEEECcccHHHHHHHHHHHHHHHHHhhccc
Confidence 31 1122322222 234445 8899999999999999999999889999999999999999999999999862 6
Q ss_pred ccCccccCCeEEeeeeHHHHHHHHHhCCCceEEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccc
Q 015124 236 WKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTR 315 (413)
Q Consensus 236 Yp~~~~~~~I~~~~~~VD~~a~~Lv~~P~~FViv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~ 315 (413)
||+ .+|+++|+|||+||||||++|++|||||+|||||||||++|+++|||||+||+|||+++ .+||||+|||||+
T Consensus 234 yp~----~~I~~~~~~vD~~~mqlv~~P~~fVivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~-~~~fEpvHGSAPd 308 (399)
T 1zor_A 234 LEK----AGVNYRYMLIDDAAAQILRSEGGMLWACMNYEGDIMSDMIASGFGSLGLMTSVLVSPDG-VYEFEAAHGTVRR 308 (399)
T ss_dssp HHH----TTCCEEEEEHHHHHHHHHHSCCCSEEEECHHHHHHHHHHHHHHHCCGGGEEEEEECTTC-CEEEEESSCCCHH
T ss_pred CCC----CcEEEEEEEHHHHHHHhccCCCceEEEEccchHHHHHHHHHHhcCCccccceeEecCCC-CeEEeCCCCcccc
Confidence 881 14999999999999999999999999999999999999999999999999999999986 4899999999998
Q ss_pred cccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHH
Q 015124 316 HYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTE 395 (413)
Q Consensus 316 ~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~ 395 (413)
+++++|||||++|||+|+|||++|||+|||+.+.++++.++|++|++||.+|+++|++|+|||+..+|. +.+.+||+
T Consensus 309 i~~~~iaGk~~~ANP~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~g~~T~Dlgg~~~g~---~~~~~~T~ 385 (399)
T 1zor_A 309 HYYRYLKGEKTSTNPTASIFAWTGAIRKRGELDGTPEVCEFADKLEKAVINTIESGVITKDLQPFTEPP---IDKYVTLE 385 (399)
T ss_dssp HHHHHTTTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCGGGGGGCSSC---CCCCCCHH
T ss_pred cchhhhcCCCCccCcHHHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHHHHHcCCcCccccccCCCC---CCCCCCHH
Confidence 877789999944999999999999999999887777788999999999999999999999997321120 00147999
Q ss_pred HHHHHHHHHHHHHh
Q 015124 396 EFIDAVADDLRARL 409 (413)
Q Consensus 396 e~~daV~~~l~~~~ 409 (413)
||+|+|+++|+++|
T Consensus 386 e~~daV~~~l~~~~ 399 (399)
T 1zor_A 386 EFIDEVKKNLEKLL 399 (399)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999996543
No 5
>2uxq_A Isocitrate dehydrogenase native; psychrophilic, cold adaptation, thermal stability, oxidoreductase; HET: SO4 PEG; 1.75A {Desulfotalea psychrophila} PDB: 2uxr_A*
Probab=100.00 E-value=8.9e-109 Score=841.25 Aligned_cols=378 Identities=46% Similarity=0.741 Sum_probs=327.3
Q ss_pred ceeccccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchh
Q 015124 5 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR 84 (413)
Q Consensus 5 ~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~ 84 (413)
||||++||++|||||||||||++++++|++++++|+|+++++|+++++++|+++|++++++|+++|++||||++||.+..
T Consensus 2 ~~~~~~~i~~i~GDgig~ei~~~~~~vl~~~~~~~~~~~~~~G~~~~~~~g~~lp~etl~~~k~~da~LkGav~tP~~~~ 81 (402)
T 2uxq_A 2 KIQMKTPLVELDGDEMTRVLWPLIKDKLLLPFIDLQTEYYDLGIEERDRTNDQITIDAAEAIKKYGVGVKNATITPNQDR 81 (402)
T ss_dssp CBCCSSCEEEEECCHHHHHHHHHHHHHHTTTTBCCCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCHHH
T ss_pred ceeeecceEEecCCCccHHHHHHHHHHHHhCCCCeEEEEEecCHHHHHhhCCcCCHHHHHHHHhCCEEEECCccCCCccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999998766
Q ss_pred hHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCC
Q 015124 85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGK 162 (413)
Q Consensus 85 ~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~ 162 (413)
+|+..+.++|+|+|++||++||||+|+|||++ |++++|++ ...+|+||| ||||+|+|.++
T Consensus 82 ~~~~~~~~~~~s~~l~LR~~ldlyan~RPv~~-------~~~~~~~~-----------~~~~divIvRE~teg~Y~g~e~ 143 (402)
T 2uxq_A 82 VEEYGLKEQWKSPNATVRAMLDGTVFRKPIMV-------KNIKPSVR-----------SWQKPIVVGRHAYGDFYKNAEI 143 (402)
T ss_dssp HHHHTCSSCCCCHHHHHHHHHCCEEEEEECCC-------TTCCCSBT-----------TCCSCCEEEEECSCGGGGCEEE
T ss_pred CccccccccccCchHHHHHHhCCeEEEEEEEc-------CCCCCCCC-----------CCCCCeEEEeccCCCcccCcce
Confidence 66644445789999999999999999999943 55554432 135888888 78999987643
Q ss_pred Ccc--c--------------ceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHH
Q 015124 163 DEK--T--------------ELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFK 225 (413)
Q Consensus 163 ~~~--~--------------~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~ 225 (413)
... . ++.++++. .+.+.. .+||+++++||+|+||+||++|++|||+|||+|||+.|+|||+
T Consensus 144 ~~~~~g~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~T~~~~eRiar~AFe~A~~r~~kVt~v~KaNVlk~sdglf~ 221 (402)
T 2uxq_A 144 FAEAGGKLEIVVTDKNGKETRQTIMEVD--EPAIVQGIHNTVASIGHFARACFEYSLDQKIDCWFATKDTISKQYDQRFK 221 (402)
T ss_dssp EETTCEEEEEEEECTTSCEEEEEEEEES--SCEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHH
T ss_pred eeccCCcceeeeeccCCccccccccccC--CCceEEEEEECHHHHHHHHHHHHHHHHHcCCcEEEEECCCcchhhHHHHH
Confidence 210 0 00000011 123444 7899999999999999999999889999999999999999999
Q ss_pred HHHHHHHHhhccCccccCCeEEeeeeHHHHHHHHHhCCCceEEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEE
Q 015124 226 DIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIE 305 (413)
Q Consensus 226 ~~~~eva~~eYp~~~~~~~I~~~~~~VD~~a~~Lv~~P~~FViv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~ 305 (413)
++|+|||+++||++|.+++|+++|+|||+||||||++|++|||||+|||||||||++|+++|||||+||+|||+++ .+|
T Consensus 222 ~~~~eva~~eypd~~~~~~I~~~~~~vD~~~mqlv~~P~~fVivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~-~~l 300 (402)
T 2uxq_A 222 IIFEEIFAQEYKEKFAAAGIEYFYTLIDDVVARMMKTEGGMLWACKNYDGDVMSDMVASAFGSLAMMSSVLVSPYG-YFE 300 (402)
T ss_dssp HHHHHHHHHHTHHHHHHHTCCEEEEEHHHHHHHHTTCCCCSEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTS-CEE
T ss_pred HHHHHHHHHhCCCcccCCeEEEEEEEHHHHHHHHccCCCceEEEEcccchHHHHHHHHHhcCCccccccceecCCC-CeE
Confidence 9999999448997777777999999999999999999999999999999999999999999999999999999986 489
Q ss_pred EccccccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCc
Q 015124 306 AEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSK 385 (413)
Q Consensus 306 FEp~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~ 385 (413)
|||+|||||++++++|||||++|||+|+|||++|||+|||+.+.++++.++|++|++||.+|+++|++|+|||+..+|.
T Consensus 301 fEpvHGSAPdi~~~~~aGk~~~ANP~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~G~~T~Dlgg~~~g~- 379 (402)
T 2uxq_A 301 YEAAHGTVQRHYYQHLKGERTSTNPVALIYAWTGALRKRGELDGTPDLCAFCDSLEAITIECIESGYMTGDLARICEPA- 379 (402)
T ss_dssp EECCSCCCHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTEECHHHHTTCSSC-
T ss_pred EeCCCCChhhhhhhhhcCCCcccCcHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHHcCCcCccccccCCCC-
Confidence 9999999997766777999955999999999999999999887777888999999999999999999999998311121
Q ss_pred CCCccccCHHHHHHHHHHHHH
Q 015124 386 MTREHYLNTEEFIDAVADDLR 406 (413)
Q Consensus 386 ~~~~~~~sT~e~~daV~~~l~ 406 (413)
+.+.+||+||+|+|+++|+
T Consensus 380 --~~~~~~T~e~~daI~~~l~ 398 (402)
T 2uxq_A 380 --AIKVLDSIEFIDELGKRLQ 398 (402)
T ss_dssp --CSEECCHHHHHHHHHHHHH
T ss_pred --CCCCcCHHHHHHHHHHHHh
Confidence 1125899999999999995
No 6
>3flk_A Tartrate dehydrogenase/decarboxylase; cytoplasm, lyase, magnesium, manganese, NAD, oxidoreductase; HET: NAD; 2.00A {Pseudomonas putida} PDB: 3fmx_X*
Probab=100.00 E-value=3.8e-107 Score=817.70 Aligned_cols=347 Identities=18% Similarity=0.169 Sum_probs=313.2
Q ss_pred ccccEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCc-hhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcc
Q 015124 8 VANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGL-PNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (413)
Q Consensus 8 m~~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~-~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~ 82 (413)
|.++|++|||||||||||+++++||.+. +++|+|+++++|+ ++++++|+++|++++++|+++|++||||+++|.+
T Consensus 4 ~~~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~~g~~lp~~tl~~~~~~da~L~Gavg~P~~ 83 (364)
T 3flk_A 4 HSFRIAAIPGDGIGLEVLPEGIRVLEAAALKHGLALEFDTFEWASCDYYLQHGKMMPDDWAEQLKQYDAIYFGAVGWPDK 83 (364)
T ss_dssp -CEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCSSHHHHHHHSSSSCTTHHHHHTTSSEEEEEECCBTTT
T ss_pred CceEEEEECCCcccHHHHHHHHHHHHHHHHhcCCCeEEEEEeCCcHHHHhccCCcCCHHHHHHHHHCCEEEECCccCccc
Confidence 5689999999999999999999988653 7999999999999 8999999999999999999999999999999974
Q ss_pred hhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecC
Q 015124 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPE 160 (413)
Q Consensus 83 ~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~ 160 (413)
++. . ..+.|+|++|||+||||+|+||| +++||+++|++-.+ .+++|+||| ||||+|+|.
T Consensus 84 --~~~--~-~~~~s~~l~LR~~ldlyanvRP~------~~~pg~~splk~~~--------~~~vD~vivREnteG~Y~g~ 144 (364)
T 3flk_A 84 --VPD--H-ISLWGSLLKFRREFDQYVNIRPV------RLFPGVPCALANRK--------VGDIDFVVVRENTEGEYSSL 144 (364)
T ss_dssp --BCH--H-HHHHTTHHHHHHHTTCCEEEEEE------ECCTTCCCSBTTCC--------TTSSEEEEEEECSSBTCCCC
T ss_pred --CCC--C-cCcccchHHHHHHhCCeEEEEEE------eccCCccccccccc--------CCCCCEEEEeeCCCceecCc
Confidence 121 0 11357899999999999999999 88999999986222 468999999 899999998
Q ss_pred CCCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCC-CEEEEeCCCccccccHHHHHHHHHHHHhhccC
Q 015124 161 GKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIFQEVYEANWKS 238 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~ 238 (413)
++. .....+ ++++++ ++|||+++|||+|+||+||++|++ |||+|||+|||+.|+|||+++|+|||+ +||
T Consensus 145 ~~~------~~~~~~-~~~a~~~~~~T~~~~eRIar~AFe~A~~r~~kkVt~v~KaNvlk~s~glf~~~~~eva~-eyp- 215 (364)
T 3flk_A 145 GGI------MFENTE-NEIVIQESIFTRRGVDRILKYAFDLAEKRERKHVTSATKSNGMAISMPYWDKRTEAMAA-HYP- 215 (364)
T ss_dssp EEE------ESTTST-TCEEEEEEEEEHHHHHHHHHHHHHHHHHSSSCEEEEEECTTTSTTHHHHHHHHHHHHHT-TCT-
T ss_pred Cce------eccCCC-CCEEEEEEEECHHHHHHHHHHHHHHHHhcCCCeEEEEECcchhhhHHHHHHHHHHHHHH-HCC-
Confidence 542 110112 579999 999999999999999999999976 699999999999999999999999997 899
Q ss_pred ccccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCc-eEEEcccccccccc
Q 015124 239 KFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGK-TIEAEAAHGTVTRH 316 (413)
Q Consensus 239 ~~~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~-~a~FEp~HGSAp~~ 316 (413)
+|+++|+|||+||||||++|++| ||||+|||||||||++|+++||+||+||+|||+++. ++||||+|||||
T Consensus 216 -----dv~~~~~~vD~~am~lv~~P~~FDVivt~NlfGDILSD~aa~l~GslGl~pSanig~~~~~~a~fEp~HGSAP-- 288 (364)
T 3flk_A 216 -----HVSWDKQHIDILCARFVLQPERFDVVVASNLFGDILSDLGPACAGTIGIAPSANLNPERNFPSLFEPVHGSAP-- 288 (364)
T ss_dssp -----TCEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCSTTCEEEEECTTCSSCEEEEESSCCCT--
T ss_pred -----CceEEeeEHHHHHHHHHhCcccCcEEEecccchHHHHHHHHHhcCCcccccccccCCCCCcceEEecCCCCch--
Confidence 99999999999999999999999 999999999999999999999999999999998752 399999999999
Q ss_pred ccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHH
Q 015124 317 YRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEE 396 (413)
Q Consensus 317 ~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e 396 (413)
||||||+ |||+|+|||++|||+|||.++ +++.++|++|++||.+++++|++|+||| | .+||+|
T Consensus 289 ---diAGk~i-ANP~A~IlS~ammL~~lg~~~--~~~~~~A~~Ie~Av~~~l~~G~~T~Dlg----g-------~~~T~e 351 (364)
T 3flk_A 289 ---DIFGKNI-ANPIAMIWSGALMLEFLGQGD--ERYQRAHDDMLNAIERVIADGSVTPDMG----G-------TLSTQQ 351 (364)
T ss_dssp ---TTTTSSC-CCCHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHTCCCGGGT----C-------CCCHHH
T ss_pred ---hhcCCCc-cCcHHHHHHHHHHHHHhCccc--chhHHHHHHHHHHHHHHHHcCCCCcccC----C-------CcCHHH
Confidence 9999999 999999999999999999655 4468999999999999999999999997 6 799999
Q ss_pred HHHHHHHHHH
Q 015124 397 FIDAVADDLR 406 (413)
Q Consensus 397 ~~daV~~~l~ 406 (413)
|+|+|+++|+
T Consensus 352 ~~~aV~~~l~ 361 (364)
T 3flk_A 352 VGAAISDTLA 361 (364)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999996
No 7
>4aoy_A Isocitrate dehydrogenase [NADP]; oxidoreductase, temperature adaptation, thermophilic, psychr NADP+ selectivity, domain movements; 2.35A {Clostridium thermocellum} PDB: 4aou_A
Probab=100.00 E-value=1.6e-107 Score=829.57 Aligned_cols=380 Identities=52% Similarity=0.832 Sum_probs=313.3
Q ss_pred ccceeccccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcc
Q 015124 3 FQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (413)
Q Consensus 3 ~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~ 82 (413)
|+||||++||++|||||||||+|+.++++++.++++|+|+++++|++++++||+++|++++++|+++||+||||++||.+
T Consensus 1 ~~~i~~~~~i~~i~GDei~~e~~~~i~~v~~~~~~~i~~~~~d~G~~~~~~tg~~lp~etl~aik~~~v~lkGa~~tP~~ 80 (402)
T 4aoy_A 1 MSKIKMKVPLVEMDGDEMTRIIWRLIKENLLEPYIELNTEYYDLGLENRDKTEDQVTIDAARAIQKYGVGVKCATITPNA 80 (402)
T ss_dssp -CCEECSSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHHTTHHHHHHHHHHHHHSEEEECCCCCCCH
T ss_pred CCcccccCcEEEECCCchHHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECcccCCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecC
Q 015124 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPE 160 (413)
Q Consensus 83 ~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~ 160 (413)
.+++++.+++.|+|+|++||+.||||+|+|||. +||+++|+. ..++|+||| ||||+|+|.
T Consensus 81 ~~~~~~~l~~~~~s~n~~LR~~Ldlyan~rPv~-------~~~i~~~~~-----------~~~~DivIvREnteg~Y~g~ 142 (402)
T 4aoy_A 81 QRVEEYNLKKMWKSPNGTIRAILDGTVFRAPIV-------VNSIKPFVK-----------GWKKPISIARHAYGDVYKNV 142 (402)
T ss_dssp HHHHHTTCSSCCCCHHHHHHHHHTCEEEEEECC-------CTTSCCSBT-----------TCCBCCEEEEC------CCE
T ss_pred cccccccccccccChHHHHHHHhCCeEEeeeEe-------ccCCCCcCC-----------CCCCCEEEEEeccCCeecCc
Confidence 777776666789999999999999999999994 355555542 136999999 899999998
Q ss_pred CCCccc----------------ceeeecccCCCceEEEeecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHH
Q 015124 161 GKDEKT----------------ELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRF 224 (413)
Q Consensus 161 ~~~~~~----------------~~~~~~~~~~~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf 224 (413)
++..+. ++++.++.+ .+++...++|+++++||+|+||+||++|++|||+|||+|||+.|||||
T Consensus 143 e~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~gv~~~~~~t~~~~eRiar~AF~~A~~~~~~vt~v~KaNilk~tdglf 221 (402)
T 4aoy_A 143 EYYVPSAGKAELVFTSENGEVSRQTIHEFDG-PGVIMGMHNTDKSIRSFARACFNYALDMNQDLWFSTKDTISKTYDHRF 221 (402)
T ss_dssp EEEECSCEEEEEEEEETTSCEEEEEEEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSHHHHHHH
T ss_pred eeeccCccceeeeeeccCCcccccccccccC-CeeEEEEEecHHHHHHHHHHHHHHHHHcCCcEEEEECCccchhhhhHH
Confidence 652110 001111111 233334888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCccccCCeEEeeeeHHHHHHHHHhCCCceEEEecCCchhhhhhhHhhhcCCcccccccccCCCCceE
Q 015124 225 KDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTI 304 (413)
Q Consensus 225 ~~~~~eva~~eYp~~~~~~~I~~~~~~VD~~a~~Lv~~P~~FViv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a 304 (413)
+++|+|||+++||++|.+.+|+++|++||+||||||++|++|||||+|||||||||++|+++||+||+||+|||+++ ++
T Consensus 222 ~~~~~eva~~eyp~~~~~~~i~~~~~~vD~~~~~lv~~P~~fVivt~Nl~GDIlSD~~A~l~GslGl~psanig~~~-~~ 300 (402)
T 4aoy_A 222 KDIFQEIYENEYKEKFEAKNLQYFYTLIDDAVARIIRSEGGMVWACKNYDGDVMSDMVASAFGSLAMMTSVLVSPDG-KY 300 (402)
T ss_dssp HHHHHHHHHHHTHHHHHHTTCCEEEEEHHHHHHHHHTSCBCSEEECCC-CHHHHHHHHHHHHSCTTSEEEEEECTTC-CE
T ss_pred HHHHHHHHHHhCcccccCCCeEEEEEEHHHHHHHHhhCCCCcEEEECCcchHHHHHHHHHhcCchhhccccccCCCC-ce
Confidence 99999999767999998889999999999999999999999999999999999999999999999999999999887 69
Q ss_pred EEccccccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCC
Q 015124 305 EAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGS 384 (413)
Q Consensus 305 ~FEp~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~ 384 (413)
+|||+|||||+|++++||||+++|||+|+|||++|||+|+|+++.++++.++|++|++||.+|+++|++|+||| |.
T Consensus 301 ~fEp~HGSApd~~~~~iaGk~~~aNP~A~Ils~a~mL~~~g~~~~~~~l~~~A~~ie~Av~~~l~~g~~T~Dlg----g~ 376 (402)
T 4aoy_A 301 EFEAAHGTVTRHYYKHLKGEETSTNSMATIFAWTGALKKRGELDGIKELVDFATKLEQASVQTIENGVMTKDLA----SL 376 (402)
T ss_dssp EEEC-----------------CCCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTEEEHHHH----TT
T ss_pred EEeeccCCccccchhhccCCCcCcCcHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHcCCCCcccc----cc
Confidence 99999999999999999999977999999999999999999988888889999999999999999999999998 41
Q ss_pred c-CCCccccCHHHHHHHHHHHHH
Q 015124 385 K-MTREHYLNTEEFIDAVADDLR 406 (413)
Q Consensus 385 ~-~~~~~~~sT~e~~daV~~~l~ 406 (413)
. ....+.++|+||+|+|+++|+
T Consensus 377 ~~~~~~~~~~T~ef~~av~~~l~ 399 (402)
T 4aoy_A 377 SEVPEKKIVNTEDFLKEIRKTFE 399 (402)
T ss_dssp CCCSCCEEECHHHHHHHHHHHHT
T ss_pred cccCCCCCcCHHHHHHHHHHHHh
Confidence 0 011235699999999999985
No 8
>3udu_A 3-isopropylmalate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.85A {Campylobacter jejuni} SCOP: c.77.1.1 PDB: 3udo_A
Probab=100.00 E-value=2.2e-107 Score=817.24 Aligned_cols=340 Identities=20% Similarity=0.191 Sum_probs=310.9
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhh
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARV 85 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~ 85 (413)
++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+..+
T Consensus 7 ~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~da~L~Gavg~P~~~~~ 86 (361)
T 3udu_A 7 YKVAVLAGDGIGPLVMKEALKILTFIAQKYNFSFELNEAKIGGASIDAYGVALSDETLKLCEQSDAILFGSVGGPKWDNL 86 (361)
T ss_dssp EEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCEEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGTTS
T ss_pred eeEEEECCCccCHHHHHHHHHHHHHHHHhcCCCEEEEEEeccHHHHHhhCCcCCHHHHHHHHHCCcEEECCcCCCCcCCC
Confidence 79999999999999999999988653 79999999999999999999999999999999999999999999987544
Q ss_pred HHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCc--chhhhHHHHHhhhcccCCcceEEe--eeceeeecCC
Q 015124 86 KEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGML--LVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEG 161 (413)
Q Consensus 86 ~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~--~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~ 161 (413)
|. ..++|.++|++|||+||||||+||| +++||++ +|++-++ .++++|+||| ||||+|+|.+
T Consensus 87 ~~--~~~~~~~~~l~LRk~ldLyaNvRP~------~~~pg~~~~splk~~~-------~~~~vD~vivREnTeG~Y~g~~ 151 (361)
T 3udu_A 87 PI--DQRPERASLLPLRKHFNLFANLRPC------KIYESLTHASPLKNEI-------IQKGVDILCVRELTGGIYFGKQ 151 (361)
T ss_dssp CG--GGSHHHHHHHHHHHHHTCCEEEEEE------ECCGGGGGGSSBCHHH-------HTTCCEEEEEEECSSGGGTSCE
T ss_pred CC--CcCccccchHHHHHHcCCEEEEEEe------eccCCccccCCCcccc-------ccCCCcEEEEcccCCCeecCcc
Confidence 32 2344555589999999999999999 8889996 8876322 1479999999 8999999974
Q ss_pred CCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCcc
Q 015124 162 KDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKF 240 (413)
Q Consensus 162 ~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~ 240 (413)
+. ..+++++ ++|||+++|||+|+||+||++|++|||+|||+|||+ |+|||+++|+||++ +||
T Consensus 152 ~~------------~~~~a~~~~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNvl~-t~glf~~~~~eva~-eyp--- 214 (361)
T 3udu_A 152 DL------------GKESAYDTEIYTKKEIERIARIAFESARIRKKKVHLIDKANVLA-SSILWREVVANVAK-DYQ--- 214 (361)
T ss_dssp EE------------CSSEEEEEEEEEHHHHHHHHHHHHHHHHHTTSEEEEEECTTTCH-HHHHHHHHHHHHGG-GCT---
T ss_pred CC------------cCceEEEEEeccHHHHHHHHHHHHHHHHHcCCcEEEEECchhhc-cchHHHHHHHHHHH-HCC---
Confidence 31 1468999 999999999999999999999999999999999997 99999999999998 899
Q ss_pred ccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccc
Q 015124 241 EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRV 319 (413)
Q Consensus 241 ~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~ 319 (413)
+|+++|+|||+||||||++|++| ||||+|||||||||++|+|+||+||+||+|||+++ ++||||+|||||
T Consensus 215 ---dV~~~~~~VD~~am~lv~~P~~FDViVt~NlfGDILSD~aa~l~GslGl~pSanig~~~-~a~fEpvHGSAP----- 285 (361)
T 3udu_A 215 ---DINLEYMYVDNAAMQIVKNPSIFDVMLCSNLFGDILSDELAAINGSLGLLSSASLNDKG-FGLYEPAGGSAP----- 285 (361)
T ss_dssp ---TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHCCGGGCEEEEECTTS-CEEEEESSCCCG-----
T ss_pred ---CCeEEeeeHHHHHHHHHhCcccCcEEEecchhHHHHHHHHHHhcCchhhcceeeeCCCC-CeeeecCCCChh-----
Confidence 99999999999999999999999 99999999999999999999999999999999876 699999999999
Q ss_pred cccCCCCccChHHHHHHHHHHHHH-hcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHH
Q 015124 320 HQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFI 398 (413)
Q Consensus 320 diaGk~i~ANP~A~IlS~ammL~~-lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~ 398 (413)
||||||+ |||+|+|||++|||+| ||. .++|++|++||.+|+++|++|+||| |+ +.+||+||+
T Consensus 286 dIAGk~i-ANP~A~IlS~amML~~~lg~-------~~~A~~Ie~Av~~~l~~g~~T~Dlg----G~-----~~~~T~e~~ 348 (361)
T 3udu_A 286 DIAHLNI-ANPIAQILSAALMLKYSFKE-------EQAAQDIENAISLALAQGKMTKDLN----AK-----SYLNTDEMG 348 (361)
T ss_dssp GGTTSSC-CCCHHHHHHHHHHHHHTSCC-------HHHHHHHHHHHHHHHHTTCCCTTTC----SS-----SCCCHHHHH
T ss_pred hhcCCCc-cCCHHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHHHHcCCcCcCCC----CC-----CccCHHHHH
Confidence 9999999 9999999999999999 885 7899999999999999999999997 42 379999999
Q ss_pred HHHHHHHHH
Q 015124 399 DAVADDLRA 407 (413)
Q Consensus 399 daV~~~l~~ 407 (413)
|+|+++|++
T Consensus 349 ~aV~~~l~~ 357 (361)
T 3udu_A 349 DCILEILKE 357 (361)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999964
No 9
>3u1h_A 3-isopropylmalate dehydrogenase; oxidored; 2.80A {Bacillus SP} PDB: 2ayq_A 1v53_A 1v5b_A
Probab=100.00 E-value=6.3e-107 Score=818.76 Aligned_cols=347 Identities=19% Similarity=0.193 Sum_probs=307.9
Q ss_pred eccccEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcc
Q 015124 7 KVANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (413)
Q Consensus 7 ~m~~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~ 82 (413)
+|.++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+
T Consensus 21 ~M~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~g~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~daiL~Gavg~P~~ 100 (390)
T 3u1h_A 21 AMKKKIAVLPGDGIGPEVMEAAIEVLKAVAERFGHEFEFEYGLIGGAAIDEAGTPLPEETLDVCRGSDAILLGAVGGPKW 100 (390)
T ss_dssp ---CEEEEEEESTTHHHHHHHHHHHHHHHHHHHSCCCEEEECCCTHHHHHSSSSSSCHHHHHHHHTSSEEEEEECCCSTT
T ss_pred CccceEEEECCCccCHHHHHHHHHHHHHHHHhcCCCeEEEEEEcCHHHHHhhCCcCCHHHHHHHHHCCEEEECCcCCCCc
Confidence 68899999999999999999999998765 89999999999999999999999999999999999999999999987
Q ss_pred hhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCc--chhhhHHHHHhhhcccCCcceEEe--eeceeee
Q 015124 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGML--LVINIEQLIQLFKDLANLNWCLVI--SLSVFDV 158 (413)
Q Consensus 83 ~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~--~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~ 158 (413)
..+|. ..++ .+.|++|||+||||||+||| +++||++ +|++-.+ .+++||||| ||||+|+
T Consensus 101 ~~~~~--~~~~-~~~ll~LRk~ldLyANvRP~------k~~pg~~~~splk~~~--------~~~vD~vIVREnTeG~Y~ 163 (390)
T 3u1h_A 101 DQNPS--ELRP-EKGLLGIRKGLDLFANLRPV------KVYDSLADASPLKKEV--------IEGVDLVIVRELTGGLYF 163 (390)
T ss_dssp TSSCC--SSSS-SCCHHHHHHHTTEEEEEEEE------ECCGGGTTSSSBCHHH--------HSSCEEEEEEECSSBSCC
T ss_pred CCCCc--ccCc-cchHHHHHHHhCCeEEEEEe------eccCCccccCCccccc--------ccCCcEEEEeeCCCCeec
Confidence 53332 1122 35689999999999999999 8899998 8886332 479999999 8999999
Q ss_pred cCCCCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcc
Q 015124 159 PEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWK 237 (413)
Q Consensus 159 g~~~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp 237 (413)
|.++... ..+ .++|++ ++|||+++|||+|+||+||++|++|||+|||+||| .|+||||++|+||++ +||
T Consensus 164 g~~~~~~-------~~g-~~~a~~~~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNVl-~t~glfr~~~~eva~-eYP 233 (390)
T 3u1h_A 164 GEPSERY-------EEG-EEAAVDTLLYTREEIERIIRKAFELALTRKKKVTSVDKANVL-ESSRLWREVAEEVAK-EYP 233 (390)
T ss_dssp --------------CTT-CSEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTC-HHHHHHHHHHHHHHT-TCT
T ss_pred Ccccccc-------CCC-CceEEEEEEecHHHHhHHHHHHHHHHHHcCCceEEEECCccc-ccchHHHHHHHHHHh-HCC
Confidence 9865210 012 468999 99999999999999999999999999999999999 599999999999997 899
Q ss_pred CccccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccccccccc
Q 015124 238 SKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRH 316 (413)
Q Consensus 238 ~~~~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~ 316 (413)
+|+++++|||+||||||++|++| ||||+|||||||||++|+|+||+||+||+|||+++ ++||||+|||||
T Consensus 234 ------dV~~~~~~VD~~amqLV~~P~~FDViVt~NlfGDILSD~aA~l~GslGl~pSanig~~~-~a~fEpvHGSAP-- 304 (390)
T 3u1h_A 234 ------DVELEHMLVDNAAMQLIRNPRQFDVIVTENMFGDILSDEASMITGSLGMLPSASLSTDG-LGLYEPVHGSAP-- 304 (390)
T ss_dssp ------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHSCTTTCEEEEEETTS-CEEEEESSCCCT--
T ss_pred ------CCeEEeeeHHHHHHHHHhCcccCcEEEecccchHHHHHHHHHhcCchhhcceeeecCCC-CeeEecCCCChh--
Confidence 99999999999999999999999 99999999999999999999999999999999876 699999999999
Q ss_pred ccccccCCCCccChHHHHHHHHHHHHH-hcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHH
Q 015124 317 YRVHQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTE 395 (413)
Q Consensus 317 ~~~diaGk~i~ANP~A~IlS~ammL~~-lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~ 395 (413)
||||||+ |||+|+|||++|||+| ||. .++|++|++||.+++++|++|+||+. +|+ +.+||+
T Consensus 305 ---DIAGk~i-ANP~A~IlS~amML~~~lg~-------~~~A~~Ie~AV~~vl~~G~~T~Dl~~--gG~-----~~~~T~ 366 (390)
T 3u1h_A 305 ---DIAGKGI-ANPLATILSAAMMLRYSFGL-------EEEAKAIEKAVEKVLAEGYRTADIAK--PGG-----KYVSTT 366 (390)
T ss_dssp ---TTTTSSC-SCTHHHHHHHHHHHHHHHCC-------HHHHHHHHHHHHHHHHHTCCBTTTSC--SSC-----CCBCHH
T ss_pred ---hhcCCCc-CCcHHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHHHHcCCcChhhcc--CCC-----CccCHH
Confidence 9999999 9999999999999999 885 78999999999999999999999931 031 269999
Q ss_pred HHHHHHHHHHHH
Q 015124 396 EFIDAVADDLRA 407 (413)
Q Consensus 396 e~~daV~~~l~~ 407 (413)
||+|+|+++|+.
T Consensus 367 e~~daV~~~l~~ 378 (390)
T 3u1h_A 367 EMTDEVKAAVVD 378 (390)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999999963
No 10
>1x0l_A Homoisocitrate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, lysine biosyn; 1.85A {Thermus thermophilus} PDB: 3asj_A* 3ah3_A
Probab=100.00 E-value=4e-106 Score=801.86 Aligned_cols=325 Identities=20% Similarity=0.205 Sum_probs=305.8
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhhHHHH
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFV 89 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~~~~ 89 (413)
++|++|||||||||||++++++|.+.+++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+..
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~vl~a~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~l~Gav~~P~~~~----- 76 (333)
T 1x0l_A 2 YRICLIEGDGIGHEVIPAARRVLEATGLPLEFVEAEAGWETFERRGTSVPEETVEKILSCHATLFGAATSPTRKV----- 76 (333)
T ss_dssp EEEEEEEESTTHHHHHHHHHHHHHTTTCCEEEEEECCSHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCCSSCC-----
T ss_pred cEEEEECCCCcCHHHHHHHHHHHHHcCCCeEEEEEecchHHHHhhCCcCcHHHHHHHHHCCEEEECCccCCCCCC-----
Confidence 689999999999999999999999999999999999999999999999999999999999999999999997431
Q ss_pred hhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCCcccc
Q 015124 90 LKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKDEKTE 167 (413)
Q Consensus 90 ~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~~~~~ 167 (413)
.+++|+|++|||+||||+|+||| +++| +++|+ +++|+||| ||||+|+|.++
T Consensus 77 --~~~~s~~l~lR~~ldlyan~RP~------~~~p-~~s~~-------------~~vD~vivREnteg~Y~g~~~----- 129 (333)
T 1x0l_A 77 --PGFFGAIRYLRRRLDLYANVRPA------KSRP-VPGSR-------------PGVDLVIVRENTEGLYVEQER----- 129 (333)
T ss_dssp --TTCCCHHHHHHHHTTCCEEEEEE------ECCS-STTCC-------------SSCEEEEEEECGGGTCCCCEE-----
T ss_pred --cCccChhHHHHHHcCCEEEEEEE------eecc-CCCCC-------------CCCCEEEEecCccceeccccc-----
Confidence 26789999999999999999999 7778 77663 58999999 89999998743
Q ss_pred eeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhC-CCCEEEEeCCCccccccHHHHHHHHHHHHhhccCccccCCe
Q 015124 168 LEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGI 245 (413)
Q Consensus 168 ~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~I 245 (413)
+ + ++++++ ++|||+++|||+|+||+||++| ++|||+|||+|||+.|+|||+++|+||++ +|| +|
T Consensus 130 -~-----~-~~~a~~~~~~T~~~~eRiar~AF~~A~~r~rkkvt~v~KaNvlk~t~glf~~~~~eva~-eyp------~I 195 (333)
T 1x0l_A 130 -R-----Y-LDVAIADAVISKKASERIGRAALRIAEGRPRKTLHIAHKANVLPLTQGLFLDTVKEVAK-DFP------LV 195 (333)
T ss_dssp -E-----E-TTEEEEEEEEEHHHHHHHHHHHHHHHHTSTTCEEEEEECTTTCTTHHHHHHHHHHHHHT-TCT------TS
T ss_pred -c-----C-CCeEEEEEEecHHHHHHHHHHHHHHHHhcCCCeEEEEecCccchhhhHHHHHHHHHHHH-HCC------Cc
Confidence 1 1 578999 9999999999999999999999 56899999999999999999999999997 899 99
Q ss_pred EEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCC
Q 015124 246 WYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGG 324 (413)
Q Consensus 246 ~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk 324 (413)
+++|++||+||||||++|++| ||||+|||||||||++|+++||+||+||+|||+++ +||||+||||| |||||
T Consensus 196 ~~~~~~vD~~~m~lv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~psanig~~~--a~fEp~HGSAP-----diaGk 268 (333)
T 1x0l_A 196 NVQDIIVDNCAMQLVMRPERFDVIVTTNLLGDILSDLAAGLVGGLGLAPSGNIGDTT--AVFEPVHGSAP-----DIAGK 268 (333)
T ss_dssp EEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCSTTCEEEEECSSC--EEEEESSCCCG-----GGTTS
T ss_pred eEEEEEHHHHHHHHhhCcccceEEEEcCccchhHhHHHHhhcCCcccceeeEECCCc--eEEeCCCCChh-----hhcCC
Confidence 999999999999999999999 99999999999999999999999999999999884 89999999999 99999
Q ss_pred CCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHHHHHHHH
Q 015124 325 ETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADD 404 (413)
Q Consensus 325 ~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~ 404 (413)
|+ |||+|+|||++|||+|||+ .++|++|++||.+++++|++|+||| | .+||+||+|+|+++
T Consensus 269 ~i-ANP~A~IlS~ammL~~lg~-------~~~A~~Ie~Av~~~l~~g~~T~Dlg----G-------~~~T~e~~daV~~~ 329 (333)
T 1x0l_A 269 GI-ANPTAAILSAAMMLDYLGE-------KEAAKRVEKAVDLVLERGPRTPDLG----G-------DATTEAFTEAVVEA 329 (333)
T ss_dssp SC-CCCHHHHHHHHHHHHHHTC-------HHHHHHHHHHHHHHHHHSCCCGGGT----C-------CCCHHHHHHHHHHH
T ss_pred CC-cCcHHHHHHHHHHHHhcCc-------HHHHHHHHHHHHHHHHcCCccCccC----C-------CCCHHHHHHHHHHH
Confidence 99 9999999999999999996 7899999999999999999999997 6 68999999999999
Q ss_pred HH
Q 015124 405 LR 406 (413)
Q Consensus 405 l~ 406 (413)
|+
T Consensus 330 l~ 331 (333)
T 1x0l_A 330 LK 331 (333)
T ss_dssp HH
T ss_pred Hh
Confidence 85
No 11
>2y3z_A 3-isopropylmalate dehydrogenase; oxidoreductase, LEUB, leucine biosynthesis; HET: 2PE; 1.83A {Thermus thermophilus} PDB: 2y40_A 2y41_A* 2y42_A* 1xaa_A 1osi_A 1hex_A 1xab_A 2ztw_A* 1g2u_A 1gc9_A 1osj_A 1ipd_A 1gc8_A 1wal_A 1dpz_A 1dr0_A 1dr8_A 1idm_A 1xac_A 1xad_A
Probab=100.00 E-value=1.7e-106 Score=810.93 Aligned_cols=337 Identities=19% Similarity=0.179 Sum_probs=311.2
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhh
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARV 85 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~ 85 (413)
++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+..+
T Consensus 4 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~l~Gavg~P~~~~~ 83 (359)
T 2y3z_A 4 MKVAVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEPFPEPTRKGVEEAEAVLLGSVGGPKWDGL 83 (359)
T ss_dssp EEEEEECCSTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHHSSEEEECCCCCGGGTTS
T ss_pred cEEEEECCCCcCHHHHHHHHHHHHHHHHhcCCCeEEEEEeccHHHHHhhCCcCCHHHHHHHHHCCEEEEccccCCccccC
Confidence 78999999999999999999998765 78999999999999999999999999999999999999999999987655
Q ss_pred HHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCc--chhhhHHHHHhhhcccCCcceEEe--eeceeeecCC
Q 015124 86 KEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGML--LVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEG 161 (413)
Q Consensus 86 ~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~--~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~ 161 (413)
|+ ..++++| |++|||+||||+|+||| +++||+. +|++-++ ++++|+||| ||||+|+|.+
T Consensus 84 ~~--~~~~~~~-~l~LR~~ldlyanvRP~------~~~pgl~~~splk~~~--------~~~iD~vivREnteg~Y~g~e 146 (359)
T 2y3z_A 84 PR--KIRPETG-LLSLRKSQDLFANLRPA------KVFPGLERLSPLKEEI--------ARGVDVLIVRELTGGIYFGEP 146 (359)
T ss_dssp CG--GGCHHHH-HHHHHHHTTEEEEEEEE------ECCTTCGGGSSSCHHH--------HTTCEEEEEEECSCSTTTCSS
T ss_pred Cc--ccccchh-HHHHHHHhCCEEEEEEe------eccCCCCCCCCccccc--------CCCceEEEEecCccceEecCC
Confidence 53 2235667 89999999999999999 7889983 7876333 578999999 8999999985
Q ss_pred CCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCcc
Q 015124 162 KDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKF 240 (413)
Q Consensus 162 ~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~ 240 (413)
+. .+ .++|++ ++|||+++|||+|+||+||++|++|||+|||+|||+ ++|||+++|+||++ +||
T Consensus 147 ~~----------~~-~~~a~~~~~~T~~~~eRIar~AFe~A~~rrkkVt~v~KaNvlk-~~~lf~~~~~eva~-eyp--- 210 (359)
T 2y3z_A 147 RG----------MS-EAEAWNTERYSKPEVERVARVAFEAARKRRKHVVSVDKANVLE-VGEFWRKTVEEVGR-GYP--- 210 (359)
T ss_dssp CE----------EC-SSCEECCCCCCHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHHT-TCT---
T ss_pred Cc----------CC-CceEEEEEEEcHHHHHHHHHHHHHHHHHcCCeEEEEECCcccc-ccHHHHHHHHHHHH-HCC---
Confidence 41 12 468999 999999999999999999999988999999999999 99999999999997 899
Q ss_pred ccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccc
Q 015124 241 EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRV 319 (413)
Q Consensus 241 ~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~ 319 (413)
+|+++|+|||+||||||++|++| ||||+|||||||||++|+++||+||+||+|||+++ +||||+|||||
T Consensus 211 ---dI~~~~~~VD~~~mqlv~~P~~FDVivt~NlfGDILSD~aa~l~GslGl~pSanig~~~--~~fEpvHGSAP----- 280 (359)
T 2y3z_A 211 ---DVALEHQYVDAMAMHLVRSPARFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLGRGT--PVFEPVHGSAP----- 280 (359)
T ss_dssp ---TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHTTTSCGGGCEEEEEESSC--CEEEESSCCCG-----
T ss_pred ---cEEEEeeEHHHHHHHHhhCcccccEEEEcCcchHHHHHHHHHhcCcccccceeEeCCCC--ceeecCCCChh-----
Confidence 99999999999999999999999 99999999999999999999999999999999986 69999999999
Q ss_pred cccCCCCccChHHHHHHHHHHHHH-hcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHH
Q 015124 320 HQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFI 398 (413)
Q Consensus 320 diaGk~i~ANP~A~IlS~ammL~~-lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~ 398 (413)
||||||+ |||+|+|||++|||+| ||+ .++|++|++||.+++++| +|+||| | .+||+||+
T Consensus 281 diAGk~i-ANP~A~IlS~ammL~~slg~-------~~~A~~Ie~Av~~~l~~g-~T~Dlg----g-------~~~T~e~~ 340 (359)
T 2y3z_A 281 DIAGKGI-ANPTAAILSAAMMLEHAFGL-------VELARKVEDAVAKALLET-PPPDLG----G-------SAGTEAFT 340 (359)
T ss_dssp GGTTSSC-SCTHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHS-CCGGGT----C-------CCCHHHHH
T ss_pred hhCCCCC-cCCHHHHHHHHHHHHHhcCC-------hHHHHHHHHHHHHHHHcC-CCCccC----C-------CCCHHHHH
Confidence 9999999 9999999999999999 996 789999999999999999 999997 6 68999999
Q ss_pred HHHHHHHHHHh
Q 015124 399 DAVADDLRARL 409 (413)
Q Consensus 399 daV~~~l~~~~ 409 (413)
|+|+++|++++
T Consensus 341 daV~~~l~~~~ 351 (359)
T 2y3z_A 341 ATVLRHLAAAA 351 (359)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhhhh
Confidence 99999997653
No 12
>3vmk_A 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase; HET: IPM; 1.48A {Shewanella benthica} PDB: 3vml_A* 3vmj_A* 3vl2_A* 3vkz_A* 3vl4_A* 3vl6_A* 3vl7_A* 3vl3_A*
Probab=100.00 E-value=4.5e-106 Score=811.29 Aligned_cols=350 Identities=19% Similarity=0.186 Sum_probs=312.4
Q ss_pred ccccEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcch
Q 015124 8 VANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEA 83 (413)
Q Consensus 8 m~~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~ 83 (413)
..++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+.
T Consensus 12 ~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~g~~~~~~~~~~G~~~~~~~G~~lp~etl~~~~~~da~L~Gavg~P~~~ 91 (375)
T 3vmk_A 12 SSYQIAVLAGDGIGPEVMAEARKVLAAVEKRFDLSIEYSEYDVGGAAIDNHGCPLPEATLKGCEAADAVLFGSVGGPKWE 91 (375)
T ss_dssp SCEEEEEEEESTTHHHHHHHHHHHHHHHHHHTTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGT
T ss_pred CcceEEEECCCcccHHHHHHHHHHHHHHHHhcCCCEEEEEEECCHHHHHhhCCcCCHHHHHHHHHCCeEEECCcCCCCcc
Confidence 3589999999999999999999988653 799999999999999999999999999999999999999999999875
Q ss_pred hhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCc--chhhhHHHHHhhhcccCCcceEEe--eeceeeec
Q 015124 84 RVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGML--LVINIEQLIQLFKDLANLNWCLVI--SLSVFDVP 159 (413)
Q Consensus 84 ~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~--~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g 159 (413)
.+|. ..++|.++|++|||+||||||+||| +++||++ +|++-.+ .++++||||| ||||+|+|
T Consensus 92 ~~~~--~~~~~~~~~l~LRk~ldLyaNvRP~------~~~pg~~~~splk~~~-------~~~~vD~vIvREnTeG~Y~g 156 (375)
T 3vmk_A 92 HLPP--NDQPERGALLPLRGHFELFCNMRPA------KLHPGLEHMSPLRSDI-------SEKGFDILCVRELTGGIYFG 156 (375)
T ss_dssp TSCS--TTSHHHHHHHHHHHHTTCCEEEEEE------ECCTTCGGGSSBCHHH-------HTTCCEEEEEEECSSBTTTC
T ss_pred CCCc--cccccccchHHHHHHcCCeEEEEEE------eccCCCcccCCCCccc-------ccCCCCEEEEeeCCCCEecC
Confidence 4332 2345667789999999999999999 8889996 7875221 0479999999 89999999
Q ss_pred CCCCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccC
Q 015124 160 EGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKS 238 (413)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~ 238 (413)
.++.. ....+ ++++++ ++|||+++|||+|+||+||++|++|||+|||+|||+ ++||||++|+|||+ +||
T Consensus 157 ~~~~~------~~~~~-~~~a~~~~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNvl~-~~glf~~~~~eva~-eyp- 226 (375)
T 3vmk_A 157 KPKGR------QGEGE-NEEAFDTMRYSRKEIRRIAKIAFESAQGRRKKVTSVDKANVLA-CSVLWREVVEEVAK-DYP- 226 (375)
T ss_dssp SSCEE------ECCGG-GCEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHHT-TCT-
T ss_pred Ccccc------ccCCC-CceEEEEEEEcHHHHHHHHHHHHHHHHHcCCcEEEEECchhhh-hhhHHHHHHHHHHH-HCC-
Confidence 85421 00012 568999 999999999999999999999999999999999999 77999999999998 899
Q ss_pred ccccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccc
Q 015124 239 KFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHY 317 (413)
Q Consensus 239 ~~~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~ 317 (413)
+|+++++|||+||||||++|++| ||||+|||||||||++|+++||+||+||+|||+++ ++||||+|||||
T Consensus 227 -----dV~~~~~~VD~~am~lv~~P~~FDViVt~NlfGDILSD~aa~l~GslGl~pSanig~~~-~a~fEpvHGSAP--- 297 (375)
T 3vmk_A 227 -----DVELEHIYIDNATMQLLRRPNEFDVMLCSNLFGDIVSDEIAMLTGSMGLLASISMNSQG-FGMYEPAGGSAP--- 297 (375)
T ss_dssp -----TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTS-CEEEEESSCCCT---
T ss_pred -----CceEeeeeHHHHHHHHHhCcccCcEEEECchhHHHHHHHHHHhcCCccccceeeeCCCC-ceEEecCCCCch---
Confidence 99999999999999999999999 99999999999999999999999999999999986 699999999999
Q ss_pred cccccCCCCccChHHHHHHHHHHHHH-hcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHH
Q 015124 318 RVHQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEE 396 (413)
Q Consensus 318 ~~diaGk~i~ANP~A~IlS~ammL~~-lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e 396 (413)
||||||+ |||+|+|||++|||+| ||+ .++|++|++||.+|+++|++|+||++..+|. +.+||+|
T Consensus 298 --dIAGk~i-ANP~A~IlS~amML~~~lg~-------~~~A~~Ie~AV~~~l~~G~~T~Dl~g~~~G~-----~~~~T~e 362 (375)
T 3vmk_A 298 --DIAGQGI-ANPVAQILSAALLLRHSLKL-------EDAALAIEAAVSKALSDGYLTCELLPASERS-----QAKSTSQ 362 (375)
T ss_dssp --TTTTSSC-SCCHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTTCCCGGGSCGGGGG-----GCCCHHH
T ss_pred --hccCCCc-cCcHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHcCCCCchhccCCCCC-----CccCHHH
Confidence 9999999 9999999999999999 885 7899999999999999999999994100021 3699999
Q ss_pred HHHHHHHHHH
Q 015124 397 FIDAVADDLR 406 (413)
Q Consensus 397 ~~daV~~~l~ 406 (413)
|+|+|+++|+
T Consensus 363 ~~~aV~~~l~ 372 (375)
T 3vmk_A 363 MGDYIAQAIA 372 (375)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999985
No 13
>1cnz_A IPMDH, IMDH, protein (3-isopropylmalate dehydrogenase); oxidoreductase, leucine biosynthetic pathway, NAD-dependant enzyme; 1.76A {Salmonella typhimurium} SCOP: c.77.1.1 PDB: 1cm7_A
Probab=100.00 E-value=1.1e-105 Score=807.37 Aligned_cols=343 Identities=19% Similarity=0.169 Sum_probs=311.3
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhh
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARV 85 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~ 85 (413)
++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+..+
T Consensus 5 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~L~Gavg~p~~~~~ 84 (363)
T 1cnz_A 5 YHIAVLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSHYDVGGIAIDNHGHPLPKATVEGCEQADAILFGSVGGPKWENL 84 (363)
T ss_dssp EEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGTTS
T ss_pred cEEEEeCCCCcCHHHHHHHHHHHHHHHHhcCCceEEEEEeCChHHHhhcCCcCcHHHHHHHHHCCEEEEccccCCccccC
Confidence 79999999999999999999998765 79999999999999999999999999999999999999999999987544
Q ss_pred HHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCc--chhhhHHHHHhhhccc-CCcceEEe--eeceeeecC
Q 015124 86 KEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGML--LVINIEQLIQLFKDLA-NLNWCLVI--SLSVFDVPE 160 (413)
Q Consensus 86 ~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~--~pl~~~r~~~~~~~~~-~~iD~viv--nteG~Y~g~ 160 (413)
|+ ..+++.|+|++|||+||||+|+||| +++||+. +|++-.+ + +++|+||| ||||+|+|.
T Consensus 85 ~~--~~~~e~~~~l~LR~~ldlyanvRP~------~~~pgl~~~splk~~~--------~~~~vDivivREnteg~Y~g~ 148 (363)
T 1cnz_A 85 PP--ESQPERGALLPLRKHFKLFSNLRPA------KLYQGLEAFCPLRADI--------AANGFDILCVRELTGGIYFGQ 148 (363)
T ss_dssp CG--GGSTTHHHHHHHHHHHTCCEEEEEE------ECCTTCGGGCSBCHHH--------HHHCCEEEEEEECSSGGGTCS
T ss_pred Cc--ccCcccchHHHHHHHcCCEEEEEEE------EecCCccCCCCCcccc--------cCCCCCEEEEecccCCeecCC
Confidence 43 2346778899999999999999999 7889983 7875332 2 58999999 899999998
Q ss_pred CCCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCc
Q 015124 161 GKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 239 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~ 239 (413)
++.. . ...+ .+++++ ++|||++++||+|+||+||++|++|||+|||+|||+ +++||+++|+||++ +||
T Consensus 149 ~~~~----~--~~~~-~~~a~~~~~~T~~~~eRiar~AFe~A~~rrkkVt~v~KaNvlk-~~~lf~~~~~eva~-eyp-- 217 (363)
T 1cnz_A 149 PKGR----E--GSGQ-YEKAFDTEVYHRFEIERIARIAFESARKRRRKVTSIDKANVLQ-SSILWREIVNDVAK-TYP-- 217 (363)
T ss_dssp SCEE----E--CCGG-GCEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHHT-TCT--
T ss_pred cCcc----c--cCCC-CceEEEEEEEcHHHHHHHHHHHHHHHHhcCCeEEEEECCcccc-cchhHHHHHHHHHH-HCC--
Confidence 5311 0 0012 468999 999999999999999999999988999999999999 99999999999997 899
Q ss_pred cccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccccccccccc
Q 015124 240 FEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYR 318 (413)
Q Consensus 240 ~~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~ 318 (413)
+|+++|+|||+||||||++|++| ||||+|||||||||++|+++||+||+||+|||+++ ++||||+|||||
T Consensus 218 ----dI~~~~~~vD~~~m~lv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig~~~-~a~fEpvHGSAP---- 288 (363)
T 1cnz_A 218 ----DVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG-FGLYEPAGGSAP---- 288 (363)
T ss_dssp ----TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTS-CEEEEESSCCCG----
T ss_pred ----CceEeeeeHHHHHHHHhhCcccceEEEECCcchHHHHHHHHHhcCCCcccccceeCCCC-CeEEEcCCCChh----
Confidence 99999999999999999999999 99999999999999999999999999999999987 699999999999
Q ss_pred ccccCCCCccChHHHHHHHHHHHHH-hcccCCchhhHHHHHHHHHHHHHHHhcCCCCcch-hhhhcCCcCCCccccCHHH
Q 015124 319 VHQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDL-ALIIHGSKMTREHYLNTEE 396 (413)
Q Consensus 319 ~diaGk~i~ANP~A~IlS~ammL~~-lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dl-g~~~~G~~~~~~~~~sT~e 396 (413)
||||||+ |||+|+|||++|||+| ||+ .++|++|++||.+++++|++|+|| | |. +.+||+|
T Consensus 289 -diAGk~i-ANP~A~IlS~ammL~~~lg~-------~~~A~~Ie~Av~~~l~~g~~T~Dl~g----G~-----~~~~T~e 350 (363)
T 1cnz_A 289 -DIAGKNI-ANPIAQILSLALLLRYSLDA-------NDAATAIEQAINRALEEGVRTGDLAR----GA-----AAVSTDE 350 (363)
T ss_dssp -GGTTTTC-SCCHHHHHHHHHHHHHHSSC-------HHHHHHHHHHHHHHHHTTCCCGGGTT----TT-----TCCCHHH
T ss_pred -hhcCCCc-cCcHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHhcCCcCcccCC----CC-----CCCCHHH
Confidence 9999999 9999999999999999 985 789999999999999999999999 5 42 1389999
Q ss_pred HHHHHHHHHH
Q 015124 397 FIDAVADDLR 406 (413)
Q Consensus 397 ~~daV~~~l~ 406 (413)
|+|+|+++|+
T Consensus 351 ~~daV~~~l~ 360 (363)
T 1cnz_A 351 MGDIIARYVA 360 (363)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999985
No 14
>3r8w_A 3-isopropylmalate dehydrogenase 2, chloroplastic; dimer, isocitrate and isopropylmalate dehydrogenases family, biosynthesis; 2.25A {Arabidopsis thaliana}
Probab=100.00 E-value=4.4e-106 Score=816.81 Aligned_cols=352 Identities=17% Similarity=0.172 Sum_probs=310.2
Q ss_pred eccccEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcc
Q 015124 7 KVANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (413)
Q Consensus 7 ~m~~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~ 82 (413)
+|.++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+
T Consensus 40 ~~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~k~~daiL~Gavg~P~~ 119 (405)
T 3r8w_A 40 KKRYTITLLPGDGIGPEVVSIAKNVLQQAGSLEGVEFNFREMPIGGAALDLVGVPLPEETISAAKESDAVLLGAIGGYKW 119 (405)
T ss_dssp -CEEEEEEEEESTTHHHHHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHSSSSCHHHHHHHHHSSEEEEEECCCGGG
T ss_pred CCCeEEEEECCCcccHHHHHHHHHHHHHHHHhcCCceEEEEEEcCHHHHHhhCCcCCHHHHHHHHHCCEEEEccccCCCc
Confidence 46789999999999999999999988654 79999999999999999999999999999999999999999999987
Q ss_pred hhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCC--cchhhhHHHHHhhhcccCCcceEEe--eeceeee
Q 015124 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGM--LLVINIEQLIQLFKDLANLNWCLVI--SLSVFDV 158 (413)
Q Consensus 83 ~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~--~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~ 158 (413)
..+|. ..+++ +.|++|||+||||+|+||| +++||+ ++|++-.+ ++++|+||| ||||+|+
T Consensus 120 ~~~~~--~~~p~-~~ll~LRk~ldLyaNlRP~------k~~~gl~~~splk~~~--------~~~vD~vIvREnTeG~Y~ 182 (405)
T 3r8w_A 120 DNNEK--HLRPE-KGLLQIRAALKVFANLRPA------TVLPQLVDASTLKREV--------AEGVDLMVVRELTGGIYF 182 (405)
T ss_dssp TTSCG--GGSHH-HHHHHHHHHHTCCEEEEEE------ECCGGGGGGSSBCHHH--------HTTCEEEEEEECSCSTTT
T ss_pred cCCcc--ccCcc-cchHHHHHHhCCeEEEEEe------eccCCccccCcccccc--------CCCceEEEEeeCCCCeec
Confidence 54332 11222 3489999999999999999 888998 58886443 579999999 8999999
Q ss_pred cCCCCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcc
Q 015124 159 PEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWK 237 (413)
Q Consensus 159 g~~~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp 237 (413)
|.++... ....+ ++++++ ++|||+++|||+|+|||||++|++|||+|||+|||+ ++|||+++|+||++ +||
T Consensus 183 G~e~~~~-----~~~~~-~~~a~~~~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNVlk-~sglf~~~~~eva~-eYP 254 (405)
T 3r8w_A 183 GEPRGIK-----TNENG-EEVGFNTEVYAAHEIDRIARVAFETARKRRGKLCSVDKANVLE-ASILWRKRVTALAS-EYP 254 (405)
T ss_dssp CSSCEEE-----ECSSS-CEEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHGG-GST
T ss_pred CCccccc-----cCCCC-ceEEEEEEEecHHHHHHHHHHHHHHHHHcCCeEEEEECchhhc-cccHHHHHHHHHHh-HCC
Confidence 9865210 00012 468899 999999999999999999999989999999999999 55999999999987 899
Q ss_pred CccccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccccccccc
Q 015124 238 SKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRH 316 (413)
Q Consensus 238 ~~~~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~ 316 (413)
+|+++|+|||+||||||++|++| ||||+|||||||||++|+++||+||+||+|||+++ ++||||+|||||
T Consensus 255 ------dV~~~~~~VD~~amqLV~~P~~FDViVt~NlfGDILSD~aA~l~GslGl~pSanig~~~-~a~fEpvHGSAP-- 325 (405)
T 3r8w_A 255 ------DVELSHMYVDNAAMQLVRDPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLSDSG-PGLFEPIHGSAP-- 325 (405)
T ss_dssp ------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHSCGGGCEEEEECSSS-CCEEEESSCCCG--
T ss_pred ------CCeEEeeeHHHHHHHHHhChhhCcEEeecchhhHHHHHHHHHhcCcccccceeeecCCC-CeEEecCCCChh--
Confidence 99999999999999999999999 99999999999999999999999999999999886 699999999999
Q ss_pred ccccccCCCCccChHHHHHHHHHHHHH-hcccCCchhhHHHHHHHHHHHHHHHhcCCCCcch--hhhhcCCcCCCccccC
Q 015124 317 YRVHQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDL--ALIIHGSKMTREHYLN 393 (413)
Q Consensus 317 ~~~diaGk~i~ANP~A~IlS~ammL~~-lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dl--g~~~~G~~~~~~~~~s 393 (413)
||||||+ |||+|+|||++|||+| ||+ .++|++|++||.+++++|++|+|| | |. +.++
T Consensus 326 ---DIAGk~i-ANP~A~IlS~amML~~slg~-------~~~A~~Ie~AV~~~l~~G~~T~Dl~~g----G~-----~~~~ 385 (405)
T 3r8w_A 326 ---DIAGQDK-ANPLATILSAAMLLKYGLGE-------EKAAKRIEDAVLVALNNGFRTGDIYSA----GT-----KLVG 385 (405)
T ss_dssp ---GGTTTTC-CCCHHHHHHHHHHHHHTTCC-------TTHHHHHHHHHHHHHHTTEECGGGCCT----TS-----EECC
T ss_pred ---hhCCCCC-CCcHHHHHHHHHHHHhhCcc-------HHHHHHHHHHHHHHHHcCCcCccccCC----CC-----cccC
Confidence 9999999 9999999999999999 885 579999999999999999999999 6 51 1399
Q ss_pred HHHHHHHHHHHHHHHhhcC
Q 015124 394 TEEFIDAVADDLRARLSGK 412 (413)
Q Consensus 394 T~e~~daV~~~l~~~~~~~ 412 (413)
|+||+|+|+++|++++.++
T Consensus 386 T~e~~~aV~~~l~~~~~~~ 404 (405)
T 3r8w_A 386 CKEMGEEVLKSVDSQVPAS 404 (405)
T ss_dssp HHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 9999999999998777553
No 15
>3ty4_A Probable homoisocitrate dehydrogenase; B-hydroxyacid oxidative decarboxylase, amino-acid biosynthes lysine biosynthesis; 1.55A {Schizosaccharomyces pombe} SCOP: c.77.1.0 PDB: 3ty3_A
Probab=100.00 E-value=1.5e-104 Score=797.92 Aligned_cols=330 Identities=20% Similarity=0.234 Sum_probs=303.4
Q ss_pred cccEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHh-CCeeEEcccCCCcch
Q 015124 9 ANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLK-YNVAIKCATITPDEA 83 (413)
Q Consensus 9 ~~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~-~~v~lkg~~~~p~~~ 83 (413)
.++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|++ +|++||||+++|.+.
T Consensus 10 ~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~~da~L~Gavg~P~~~ 89 (366)
T 3ty4_A 10 RIVLGLIPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHK 89 (366)
T ss_dssp EEEEEEEEESTTHHHHHHHHHHHHHTCCGGGCCEEEEEECCCSHHHHHHHSCSSCHHHHHHHHHHCSEEEEEECCCCSSC
T ss_pred ceEEEEECCCccCHHHHHHHHHHHHHHHHhcCCceEEEEecchHHHHHhhCCCCCHHHHHHHHHhCCEEEECCccCCCCC
Confidence 489999999999999999999998764 789999999999999999999999999999999 699999999999764
Q ss_pred hhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCC
Q 015124 84 RVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEG 161 (413)
Q Consensus 84 ~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~ 161 (413)
. .++.|+|++|||+||||+|+||| +++||+. .+++|+||| ||||+|+|.+
T Consensus 90 ~-------~~~~s~~l~LRk~ldlyaNvRP~------~~~~g~~---------------~~~vD~vivREnTeG~Y~g~e 141 (366)
T 3ty4_A 90 V-------AGYSSPIVALRKKMGLYANVRPV------KSLDGAK---------------GKPVDLVIVRENTECLYVKEE 141 (366)
T ss_dssp C-------TTCCCHHHHHHHHTTCCEEEEEE------ECCTTCS---------------SSCCEEEEEEECSCBGGGCCE
T ss_pred C-------cccccchHHHHHHhCCeEEEEEE------eccCCCC---------------CCCCcEEEEeeCCCCEeecCc
Confidence 2 15788999999999999999999 8889873 147999999 7999999986
Q ss_pred CCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhC-------------CCCEEEEeCCCccccccHHHHHH
Q 015124 162 KDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-------------KWPLYLSTKNTILKKYDGRFKDI 227 (413)
Q Consensus 162 ~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-------------~~~Vt~v~KaNVl~~t~glf~~~ 227 (413)
+. +....+ ++++++ ++|||+++|||+|+||+||++| ++|||+|||+|||+.|+||||++
T Consensus 142 ~~------~~~~~~-~~~a~~~~~~Tr~~~eRIar~AFe~A~~r~~~~~~~~~~~~~rkkVt~v~KaNVl~~s~glf~~~ 214 (366)
T 3ty4_A 142 RM------VQNTPG-KRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRES 214 (366)
T ss_dssp EE------EECCTT-CCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHTTCCCSCSSCEEEEEECTTTCTTHHHHHHHH
T ss_pred ce------eccCCC-CceEEEEEEecHHHHHHHHHHHHHHHHhcCccccccccccCCCCeEEEEECCcchHhHHHHHHHH
Confidence 41 110112 579999 9999999999999999999998 66899999999999999999999
Q ss_pred HHHH---HHhhccCccccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCce
Q 015124 228 FQEV---YEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKT 303 (413)
Q Consensus 228 ~~ev---a~~eYp~~~~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~ 303 (413)
|+|| ++ +|| +|+++|+|||+||||||++|++| ||||+|||||||||++|+++|||||+||+|||++ +
T Consensus 215 ~~ev~~~a~-eyp------dV~~~~~~VD~~am~lv~~P~~FDViVt~NlfGDILSD~aa~l~GslGl~pSanig~~--~ 285 (366)
T 3ty4_A 215 CRHAQSLDP-SYA------SINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANVGDN--F 285 (366)
T ss_dssp HHHHGGGCG-GGT------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHGGGSCGGGCCCEEECSS--C
T ss_pred HHHHHHhHh-hCC------CceEEeeeHHHHHHHHHhCcccCcEEEECccchHHHHHHHHHhcCchhhhcceeeCCC--c
Confidence 9999 66 899 99999999999999999999999 9999999999999999999999999999999976 6
Q ss_pred EEEccccccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC-CCCcchhhhhc
Q 015124 304 IEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIH 382 (413)
Q Consensus 304 a~FEp~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg~~~~ 382 (413)
+||||+||||| ||||||+ |||+|+|||++|||+|||. .++|++|++||.+++++| ++|+|||
T Consensus 286 a~fEpvHGSAP-----dIaGk~i-ANP~A~IlS~amML~~lg~-------~~~A~~Ie~Av~~~l~~G~~~T~Dlg---- 348 (366)
T 3ty4_A 286 VMSEPVHGSAP-----DIAGRGI-ANPVATFRSVALMLEFMGH-------QDAAADIYTAVDKVLTEGKVLTPDLG---- 348 (366)
T ss_dssp EEECCSSCCCT-----TTTTSSC-CCCHHHHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHHCSSCCGGGT----
T ss_pred eEEecCCCChh-----hcCCCCc-cCcHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHcCCccCcccC----
Confidence 99999999999 9999999 9999999999999999985 789999999999999999 9999997
Q ss_pred CCcCCCccccCHHHHHHHHHHHHH
Q 015124 383 GSKMTREHYLNTEEFIDAVADDLR 406 (413)
Q Consensus 383 G~~~~~~~~~sT~e~~daV~~~l~ 406 (413)
| .+||+||+|+|+++|+
T Consensus 349 g-------~~~T~e~~daV~~~l~ 365 (366)
T 3ty4_A 349 G-------KSGTNEITDAVLANIH 365 (366)
T ss_dssp S-------CCCHHHHHHHHHHHC-
T ss_pred C-------CcCHHHHHHHHHHHhh
Confidence 6 7999999999999874
No 16
>1a05_A IPMDH, IMDH, 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, leucine biosynthesis; HET: IPM; 2.00A {Acidithiobacillus ferrooxidans} SCOP: c.77.1.1
Probab=100.00 E-value=4.3e-105 Score=802.36 Aligned_cols=344 Identities=21% Similarity=0.243 Sum_probs=308.2
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhh
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARV 85 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~ 85 (413)
++|++|||||||||||++++++|.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+..+
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~l~Gavg~p~~~~~ 81 (358)
T 1a05_A 2 KKIAIFAGDGIGPEIVAAARQVLDAVDQAAHLGLRCTEGLVGGAALDASDDPLPAASLQLAMAADAVILGAVGGPRWDAY 81 (358)
T ss_dssp CEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCHHHHHHHHSSSSCHHHHHHHHHCSEEEEEECCCGGGTTS
T ss_pred cEEEEECCCCcCHHHHHHHHHHHHHHHHhcCCceEEEEEeCCcHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCCcccC
Confidence 68999999999999999999998765 79999999999999999999999999999999999999999999986544
Q ss_pred HHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCc--chhhhHHHHHhhhcccCCcceEEe--eeceeeecCC
Q 015124 86 KEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGML--LVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEG 161 (413)
Q Consensus 86 ~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~--~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~ 161 (413)
|. ..+++.+ |++|||+||||+|+||| +++||+. +|++-++ ++++|+||| ||||+|+|.+
T Consensus 82 ~~--~~~~e~~-ll~lRk~ldlyanvRP~------~~~pgl~~~splk~~~--------~~~vDivIvREnteg~Y~g~~ 144 (358)
T 1a05_A 82 PP--AKRPEQG-LLRLRKGLDLYANLRPA------QIFPQLLDASPLRPEL--------VRDVDILVVRELTGDIYFGQP 144 (358)
T ss_dssp CG--GGSHHHH-HHHHHHHHTCCEEEEEE------ECCTTSGGGCSBCHHH--------HTTCEEEEEEECSSSTTTCSS
T ss_pred Cc--cccchhh-HHHHHHHcCCEEEEEEE------EecCCccCCCCCcccc--------CCCceEEEEEecCCCcccCCc
Confidence 42 1234556 79999999999999999 7889983 7876433 468999999 8999999985
Q ss_pred CCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCcc
Q 015124 162 KDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKF 240 (413)
Q Consensus 162 ~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~ 240 (413)
+.. .. ..+ ++++++ ++|||++++||+|+||+||++|++|||+|||+|||+ +++||+++|+||++ +||
T Consensus 145 ~~~----~~--~~~-~~~a~~~~~~T~~~~eRiar~AFe~A~~rrkkVt~v~KaNvlk-~~~lf~~~~~eva~-eyp--- 212 (358)
T 1a05_A 145 RGL----EV--IDG-KRRGFNTMVYDEDEIRRIAHVAFRAAQGRRKQLCSVDKANVLE-TTRLWREVVTEVAR-DYP--- 212 (358)
T ss_dssp CEE----EE--ETT-EEEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHGG-GCT---
T ss_pred Ccc----cc--CCC-CceEEEEEEEcHHHHHHHHHHHHHHHHhcCCeEEEEECCcccc-cchhHHHHHHHHHH-HCC---
Confidence 411 10 112 468899 999999999999999999999988999999999999 99999999999997 899
Q ss_pred ccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccc
Q 015124 241 EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRV 319 (413)
Q Consensus 241 ~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~ 319 (413)
+|+++|+|||+||||||++|++| ||||+|||||||||++|+++||+||+||+||| ++ ++||||+|||||
T Consensus 213 ---dI~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig-~~-~~~fEpvHGSAP----- 282 (358)
T 1a05_A 213 ---DVRLSHMYVDNAAMQLIRAPAQFDVLLTGNMFGDILSDEASQLTGSIGMLPSASLG-EG-RAMYEPIHGSAP----- 282 (358)
T ss_dssp ---TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHTTSCGGGCEEEEEC-SS-CEEEEESSCCCG-----
T ss_pred ---CceEEeeeHHHHHHHHHhCCCcccEEEecCcccHhHHHHHHhhcCCccccceeeeC-CC-ceeeecCCCChh-----
Confidence 99999999999999999999999 99999999999999999999999999999999 54 699999999999
Q ss_pred cccCCCCccChHHHHHHHHHHHHH-hcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHH
Q 015124 320 HQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFI 398 (413)
Q Consensus 320 diaGk~i~ANP~A~IlS~ammL~~-lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~ 398 (413)
||||||+ |||+|+|||++|||+| ||. .++|++|++||.+++++|++|+||++. |+ +.+||+||+
T Consensus 283 diAGk~i-ANP~A~IlS~ammL~~~lg~-------~~~A~~Ie~Av~~~l~~g~~T~Dl~g~--g~-----~~~~T~e~~ 347 (358)
T 1a05_A 283 DIAGQDK-ANPLATILSVAMMLRHSLNA-------EPWAQRVEAAVQRVLDQGLRTADIAAP--GT-----PVIGTKAMG 347 (358)
T ss_dssp GGTTTTC-SCCHHHHHHHHHHHHHTSSC-------HHHHHHHHHHHHHHHHTTCCCGGGCCT--TS-----CCCCHHHHH
T ss_pred HhcCCCc-cCcHHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHcCCcCcccccC--CC-----CCcCHHHHH
Confidence 9999999 9999999999999999 985 789999999999999999999999620 21 128999999
Q ss_pred HHHHHHHHH
Q 015124 399 DAVADDLRA 407 (413)
Q Consensus 399 daV~~~l~~ 407 (413)
|+|+++|++
T Consensus 348 daV~~~l~~ 356 (358)
T 1a05_A 348 AAVVNALNL 356 (358)
T ss_dssp HHHHHTTTC
T ss_pred HHHHHHhhc
Confidence 999999843
No 17
>1wpw_A 3-isopropylmalate dehydrogenase; oxidoreductase; 2.80A {Sulfolobus tokodaii} SCOP: c.77.1.1
Probab=100.00 E-value=1.7e-104 Score=791.00 Aligned_cols=325 Identities=19% Similarity=0.195 Sum_probs=306.3
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhh
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARV 85 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~ 85 (413)
++|++|||||||||||++++++|.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+.
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~t~~~~~~~da~l~Gav~tP~~~-- 79 (336)
T 1wpw_A 2 FTVALIQGDGIGPEIVSKSKRILAKINELYSLPIEYIEVEAGDRALARYGEALPKDSLKIIDKADIILKGPVGESAAD-- 79 (336)
T ss_dssp EEEEEECCSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEECCSHHHHHHSSSSSCHHHHHHHHTCSEEEECCCCTTHHH--
T ss_pred cEEEEECCCCcCHHHHHHHHHHHHHHHHhhCCCeEEEEEecchHHHHhhCCcCCHHHHHHHHHCCEEEECCcCCCCcc--
Confidence 68999999999999999999998766 899999999999999999999999999999999999999999999531
Q ss_pred HHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCC
Q 015124 86 KEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKD 163 (413)
Q Consensus 86 ~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~ 163 (413)
+|++|||+||||+|+||| +++||+++|+ +++|+||| ||||+|+|.++
T Consensus 80 -----------~~l~lR~~ldlyan~RP~------~~~pg~~~~~-------------~~~D~vivREnteg~Y~g~~~- 128 (336)
T 1wpw_A 80 -----------VVVKLRQIYDMYANIRPA------KSIPGIDTKY-------------GNVDILIVRENTEDLYKGFEH- 128 (336)
T ss_dssp -----------HHHHHHHTTTCCEEEEEE------ECCTTTCCSC-------------SCCEEEEEEECSSBTTTCCEE-
T ss_pred -----------hHHHHHHHhCCEEEEEEE------eccCCCCCCC-------------CCCcEEEEecCccCeEcCCcc-
Confidence 689999999999999999 8899998773 58999999 79999998753
Q ss_pred cccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCcccc
Q 015124 164 EKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEA 242 (413)
Q Consensus 164 ~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~ 242 (413)
. .+ ++++++ ++|||++++||+|+||+||++|++|||+|||+|||+.|+|||+++|+||+++
T Consensus 129 -----~----~~-~~va~~~~~~T~~~~eRiar~AF~~A~~rrkkvt~v~KaNvlk~t~glf~~~~~eva~~-------- 190 (336)
T 1wpw_A 129 -----I----VS-DGVAVGMKIITRFASERIAKVGLNFALRRRKKVTCVHKANVMRITDGLFAEACRSVLKG-------- 190 (336)
T ss_dssp -----E----EE-TTEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCTTHHHHHHHHHHHHHTT--------
T ss_pred -----c----cC-CCeEEEEEEecHHHHHHHHHHHHHHHHHhCCeEEEEECCcchhhhhHHHHHHHHHHHHh--------
Confidence 1 12 579999 9999999999999999999999889999999999999999999999999973
Q ss_pred CCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccc
Q 015124 243 AGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQ 321 (413)
Q Consensus 243 ~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~di 321 (413)
+|+++|+|||+||||||++|++| ||||+|||||||||++|+++||+||+||+|+|+++ +||||+||||| ||
T Consensus 191 -~I~~~~~~vD~~~~~lv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig~~~--a~fEp~HGSAp-----di 262 (336)
T 1wpw_A 191 -KVEYSEMYVDAAAANLVRNPQMFDVIVTENVYGDILSDEASQIAGSLGIAPSANIGDKK--ALFEPVHGAAF-----DI 262 (336)
T ss_dssp -TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECSSC--EEEEESSCCCT-----TT
T ss_pred -CceeEEEeHHHHHHHHhhCcccceEEEEcCcchHHHHHHHHHhcCCccccceEEECCCC--ceEeCCCCCch-----hh
Confidence 69999999999999999999999 99999999999999999999999999999999884 89999999999 99
Q ss_pred cCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC-CCCcchhhhhcCCcCCCccccCHHHHHHH
Q 015124 322 KGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKMTREHYLNTEEFIDA 400 (413)
Q Consensus 322 aGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg~~~~G~~~~~~~~~sT~e~~da 400 (413)
|||++ |||+|+|||++|||+|||++|+|+++.++|++|++||.+++++| ++|+||| | .+||+||+|+
T Consensus 263 aGk~i-ANP~A~IlS~ammL~~lg~~d~~~~~~~~A~~Ie~Av~~~l~~g~~~T~Dlg----G-------~~~T~e~~da 330 (336)
T 1wpw_A 263 AGKNI-GNPTAFLLSVSMMYERMYELSNDDRYIKASRALENAIYLVYKERKALTPDVG----G-------NATTDDLINE 330 (336)
T ss_dssp TTSSC-CCTHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHHHHHHHCSSCCGGGT----C-------CCCHHHHHHH
T ss_pred CCCCC-cCcHHHHHHHHHHHHHcCccccccchHHHHHHHHHHHHHHHHcCCccCCccC----C-------CCCHHHHHHH
Confidence 99999 99999999999999999999999999999999999999999999 8999997 6 6899999999
Q ss_pred HHHHH
Q 015124 401 VADDL 405 (413)
Q Consensus 401 V~~~l 405 (413)
|+++|
T Consensus 331 v~~~l 335 (336)
T 1wpw_A 331 IYNKL 335 (336)
T ss_dssp HHHSC
T ss_pred HHHhh
Confidence 99875
No 18
>1vlc_A 3-isopropylmalate dehydrogenase; TM0556, structural genomics PSI, protein structure initiative, joint center for structu genomics; 1.90A {Thermotoga maritima} SCOP: c.77.1.1
Probab=100.00 E-value=7.1e-105 Score=800.36 Aligned_cols=338 Identities=17% Similarity=0.153 Sum_probs=305.8
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhh
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARV 85 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~ 85 (413)
.+|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+..+
T Consensus 13 ~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~L~Gavg~P~~~~~ 92 (366)
T 1vlc_A 13 MKIAVLPGDGIGPEVVREALKVLEVVEKKTGKTFEKVFGHIGGDAIDRFGEPLPEETKKICLEADAIFLGSVGGPKWDDL 92 (366)
T ss_dssp EEEEEEEESTHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCTHHHHHHHSSSSCHHHHHHHHHSSEEEEEECCCGGGTTS
T ss_pred eEEEEeCCCCccHHHHHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCccccC
Confidence 58999999999999999999998776 89999999999999999999999999999999999999999999976433
Q ss_pred HHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCc--chhhhHHHHHhhhccc-CCcceEEe--eeceeeecC
Q 015124 86 KEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGML--LVINIEQLIQLFKDLA-NLNWCLVI--SLSVFDVPE 160 (413)
Q Consensus 86 ~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~--~pl~~~r~~~~~~~~~-~~iD~viv--nteG~Y~g~ 160 (413)
|. ..+++.++|++|||+||||+|+||| +++||++ +|++-.. . +++|+||| ||||+|+|.
T Consensus 93 ~~--~~r~~~~~~l~LRk~ldlyaN~RP~------~~~pgl~~~splk~~~--------~~~~vDivIvREnteG~Y~g~ 156 (366)
T 1vlc_A 93 PP--EKRPEIGGLLALRKMLNLYANIRPI------KVYRSLVHVSPLKEKV--------IGSGVDLVTVRELSYGVYYGQ 156 (366)
T ss_dssp CS--TTSHHHHTHHHHHHHTTCCEEEEEE------ECCGGGGGGSSSCHHH--------HTTCCEEEEEEECSSGGGTEE
T ss_pred Cc--ccCcccchhHHHHHHhCCEEEEEEc------cccCCCCCcCCCcccc--------cCCCceEEEEEeCCCCeecCC
Confidence 31 1123344589999999999999999 7889986 6764221 2 57999999 899999987
Q ss_pred CCCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCc
Q 015124 161 GKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 239 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~ 239 (413)
++ . .+ ++++++ ++|||++++||+|+||+||++|++|||+|||+|||+ |+|||+++|+||++ +||
T Consensus 157 ~~------~----~~-~~~a~~~~~~Tr~~~eRIar~AFe~A~~rrkkVt~v~KaNvlk-t~glf~~~~~eva~-eyp-- 221 (366)
T 1vlc_A 157 PR------G----LD-EEKGFDTMIYDRKTVERIARTAFEIAKNRRKKVTSVDKANVLY-SSMLWRKVVNEVAR-EYP-- 221 (366)
T ss_dssp EE------E----EC-SSCEEEECCCCHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHHT-TCT--
T ss_pred cc------c----cC-CCeEEEEEEEcHHHHHHHHHHHHHHHHHcCCeEEEEECCcccc-cchHHHHHHHHHHH-HCC--
Confidence 53 1 12 568999 999999999999999999999988999999999999 99999999999998 899
Q ss_pred cccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccccccccccc
Q 015124 240 FEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYR 318 (413)
Q Consensus 240 ~~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~ 318 (413)
+|+++|+|||+||||||++|++| ||||+|||||||||++|+++||+||+||+||| + .+||||+|||||
T Consensus 222 ----dV~~~~~~VD~~~mqlv~~P~~FDVivt~NlfGDILSD~aa~l~GslGl~pSanig-~--~alfEpvHGSAP---- 290 (366)
T 1vlc_A 222 ----DVELTHIYVDNAAMQLILKPSQFDVILTTNMFGDILSDESAALPGSLGLLPSASFG-D--KNLYEPAGGSAP---- 290 (366)
T ss_dssp ----TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHTTSSSCGGGCEEEEES-S--SEEEEESSCCCT----
T ss_pred ----CceEEeeeHHHHHHHHhhCcccceEEEEcchhHHHHHHHHHHhcCccccccEeeeC-C--ceeeecCCCchh----
Confidence 99999999999999999999999 99999999999999999999999999999999 5 599999999999
Q ss_pred ccccCCCCccChHHHHHHHHHHHHH-hcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccc-cCHHH
Q 015124 319 VHQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHY-LNTEE 396 (413)
Q Consensus 319 ~diaGk~i~ANP~A~IlS~ammL~~-lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~-~sT~e 396 (413)
||||||+ |||+|+|||++|||+| ||. .++|++|++||.+++++|++|+|||. +|+ . +||+|
T Consensus 291 -dIAGk~i-ANP~A~IlS~ammL~~slg~-------~~~A~~Ie~Av~~~l~~g~~T~Dlg~--~gg------~~~~T~e 353 (366)
T 1vlc_A 291 -DIAGKNI-ANPIAQILSLAMMLEHSFGM-------VEEARKIERAVELVIEEGYRTRDIAE--DPE------KAVSTSQ 353 (366)
T ss_dssp -TTTTTTC-SCCHHHHHHHHHHHHHHHCC-------HHHHHHHHHHHHHHHHTTCCCGGGCS--SGG------GCCCHHH
T ss_pred -hcCCCCc-cCcHHHHHHHHHHHHHHcCC-------hhHHHHHHHHHHHHHHcCCccccccc--CCC------CCcCHHH
Confidence 9999999 9999999999999999 995 78999999999999999999999962 011 4 89999
Q ss_pred HHHHHHHHHH
Q 015124 397 FIDAVADDLR 406 (413)
Q Consensus 397 ~~daV~~~l~ 406 (413)
|+|+|+++|+
T Consensus 354 ~~daV~~~l~ 363 (366)
T 1vlc_A 354 MGDLICKKLE 363 (366)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999995
No 19
>3dms_A Isocitrate dehydrogenase [NADP]; struc genomics, seattle structural genomics center for infectious ssgcid, glyoxylate bypass, manganese; 1.65A {Burkholderia pseudomallei} SCOP: c.77.1.1 PDB: 1pb1_A* 1ai3_A* 1ika_A* 1ai2_A* 1p8f_A* 1pb3_A 1sjs_A 3icd_A 3lcb_C* 4aj3_A* 4aja_A* 4icd_A* 5icd_A* 9icd_A* 1bl5_A* 1cw7_A* 1idd_A 1ide_A* 1hj6_A* 7icd_A ...
Probab=100.00 E-value=5.3e-104 Score=809.11 Aligned_cols=353 Identities=18% Similarity=0.184 Sum_probs=308.3
Q ss_pred ccccEEEECCCCccHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhccCC--CCCHHHHHHHHhCCeeEEcccC
Q 015124 8 VANPIVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDD--KVTVESAEATLKYNVAIKCATI 78 (413)
Q Consensus 8 m~~~I~vi~GDGIGpEv~~~~~~v~~~~-------~~~i~~~~~~~g~~~~~~~g~--~lp~~~~~ai~~~~v~lkg~~~ 78 (413)
+.++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+ ++|++++++|+++|++||||++
T Consensus 35 ~~~~I~vipGDGIGpEV~~~a~~Vl~aa~~~~~~~~~~i~~~~~~~G~~a~~~~G~~~~lp~etl~~~k~~da~l~G~~~ 114 (427)
T 3dms_A 35 DQPIIPYIEGDGTGFDITPVMIKVVDAAVEKAYGGKKKIHWMEIYAGEKATKVYGPDVWLPEETLQVLKEYVVSIKGPLT 114 (427)
T ss_dssp SSBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEEECCTHHHHHHHCTTCSSCHHHHHHHHHTCEEEECCCC
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCHHHHHhcCCCCCCCHHHHHHHHhcCEEEECCCC
Confidence 4478999999999999999999988653 379999999999999999999 9999999999999999999999
Q ss_pred CCcchhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eecee
Q 015124 79 TPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVF 156 (413)
Q Consensus 79 ~p~~~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~ 156 (413)
||.+. .++|+|++|||+||||||+||| +++||+++|++. .+++||||| ||||+
T Consensus 115 tP~~~---------~~~s~~l~LRk~LdLyaNlRPv------~~~pg~~splk~----------~~~vDivIvREnTeG~ 169 (427)
T 3dms_A 115 TPVGG---------GIRSLNVALRQELDLYVCLRPI------QYFKGVPSPVRE----------PEKTNMVIFRENSEDI 169 (427)
T ss_dssp CCC-------------CCHHHHHHHHTTCCEEEEEE------CCCTTCCCSSSC----------GGGCCEEEEEECSSGG
T ss_pred CCCCc---------ccCChhHHHHHHhCCeEEEEEe------ecCCCCCCCCCC----------CCCceEEEEEECCCCE
Confidence 99754 5788999999999999999999 899999999851 258999999 89999
Q ss_pred eecCCCCcccc--eeeecc----cC------CCceEEE-eecChHHHHHHHHHHHHHHHhCC-CCEEEEeCCCccccccH
Q 015124 157 DVPEGKDEKTE--LEVYNF----TG------EGGVALS-MYNTDESIRAFAEASMNTAYQKK-WPLYLSTKNTILKKYDG 222 (413)
Q Consensus 157 Y~g~~~~~~~~--~~~~~~----~~------~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~-~~Vt~v~KaNVl~~t~g 222 (413)
|+|.++..... ..+.++ .+ .+++|++ ++|||++++||+|+||+||++|+ +|||+|||+|||+.|+|
T Consensus 170 Y~G~e~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~Tr~~~eRIar~AFe~A~~r~rkkVT~V~KaNVlk~tdg 249 (427)
T 3dms_A 170 YAGIEWAAESEQAKKVIKFLQEEMGVKKIRFPQTSGIGIKPVSKEGTERLVRKAIQYAIDNDRKSVTLVHKGNIMKFTEG 249 (427)
T ss_dssp GGCCEECTTCHHHHHHHHHHHHTSCCCCCSCGGGCCEECCCCCHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTSTTTHH
T ss_pred ecCcccccCCcccccccccccccccccccccCCcceEEEEEecHHHHHHHHHHHHHHHHhcCCCeEEEEECCccchhhhH
Confidence 99986421100 000000 00 1467999 99999999999999999999995 57999999999999999
Q ss_pred HHHHHHHHHHHhhccCc-------------cccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCC
Q 015124 223 RFKDIFQEVYEANWKSK-------------FEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGS 288 (413)
Q Consensus 223 lf~~~~~eva~~eYp~~-------------~~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~Gs 288 (413)
|||++|+|||+++||+. +...+|+++|+|||+||||||++|++| ||||+|||||||||++|+++||
T Consensus 250 lfr~~~~eva~~eypdv~~~~~~~~~~~~~~~~~~V~~~~~~VD~~amqlv~~P~~FDViVt~NlfGDILSD~aA~l~Gs 329 (427)
T 3dms_A 250 AFRDAGYALAQKEFGAELIDGGPWMKFKNPKTGNEIVVKDSIADAFLQQILLRPAEYDVIATLNLNGDYISDALAAQVGG 329 (427)
T ss_dssp HHHHHHHHHHHHHHCCEESTTSSCEEEECTTTCCEEEEEEEEHHHHHHHHHHCGGGCCEEEECHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCccccccccccccccccccCceEEEEeeHHHHHHHHhhCcccceEEEEcccccHHHHHHHHHhcCC
Confidence 99999999997579951 233469999999999999999999999 9999999999999999999999
Q ss_pred cccccccccCCCCceEEEccccccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHH
Q 015124 289 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTV 368 (413)
Q Consensus 289 lGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l 368 (413)
|||+||+|||++ .+||||+||||| ||||||+ |||+|+|||++|||+|||+ .++|++|++||.+|+
T Consensus 330 lGl~pSanig~~--~a~fEpvHGSAP-----dIAGk~i-ANP~A~IlS~amML~~lg~-------~~~A~~Ie~AV~~vl 394 (427)
T 3dms_A 330 IGIAPGANLSDS--VAMFEATHGTAP-----KYAGKDY-VNPGSEILSAEMMLRHLGW-------TEAADVIISAMEKSI 394 (427)
T ss_dssp TTTCEEEEECSS--CEEEEECSCCCG-----GGTTSSC-SCCHHHHHHHHHHHHHTTC-------HHHHHHHHHHHHHHH
T ss_pred ccccceeeeCCC--cceEEeccCChh-----hhcCCCc-CCcHHHHHHHHHHHHhcCC-------HHHHHHHHHHHHHHH
Confidence 999999999987 599999999999 9999999 9999999999999999995 789999999999999
Q ss_pred hcCCCCcchhhhhcCCcCCCccccCHHHHHHHHHHHH
Q 015124 369 ESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDL 405 (413)
Q Consensus 369 ~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l 405 (413)
++|++|+|||+..+| .+.+||+||+|+|+++|
T Consensus 395 ~~G~~T~Dlgg~~~g-----~~~~~T~e~~daV~~~l 426 (427)
T 3dms_A 395 KQKRVTYDFARLMEG-----ATQVSCSGFGQVLIENM 426 (427)
T ss_dssp HHTEECHHHHTTSSS-----CEECCHHHHHHHHHHTT
T ss_pred HcCCcchhhccccCC-----CCccCHHHHHHHHHHhh
Confidence 999999999831112 13689999999999876
No 20
>3blx_B Isocitrate dehydrogenase [NAD] subunit 2; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_B* 3blv_B
Probab=100.00 E-value=2.7e-104 Score=793.80 Aligned_cols=324 Identities=23% Similarity=0.224 Sum_probs=302.7
Q ss_pred cccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhhHHH
Q 015124 9 ANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEF 88 (413)
Q Consensus 9 ~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~~~ 88 (413)
.++|++||||||||||+++++++|.+.+++|+|+++++|+++ +++|+++|++++++|+++|++||||+++|.+.
T Consensus 21 ~~~I~vipGDGIGpEv~~~~~~Vl~a~~~~i~~~~~~~G~~~-~~~g~~lp~~tl~~~~~~da~l~Gav~~P~~~----- 94 (354)
T 3blx_B 21 KYTVSFIEGDGIGPEISKSVKKIFSAANVPIEWESCDVSPIF-VNGLTTIPDPAVQSITKNLVALKGPLATPIGK----- 94 (354)
T ss_dssp CEECBCCCCSTTHHHHHHHHHHHHHTTTCSEECCCCCCCCEE-ETTEEECCHHHHHHHHHHSEEEECCCCCC--------
T ss_pred ceEEEEECCCCcCHHHHHHHHHHHHHcCCCeEEEEEEechhh-hhhCCCCCHHHHHHHHHCCEEEECCccCCCCc-----
Confidence 378999999999999999999999988999999999999999 99999999999999999999999999999753
Q ss_pred HhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCCccc
Q 015124 89 VLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKDEKT 166 (413)
Q Consensus 89 ~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~~~~ 166 (413)
+++|+|++||++||||+|+||| +++||+++|+ +++|+||| ||||+|+|.++
T Consensus 95 ----~~~s~~l~lR~~ldlyan~RP~------~~~pg~~s~~-------------~~vD~vivREnteg~Y~g~e~---- 147 (354)
T 3blx_B 95 ----GHRSLNLTLRKTFGLFANVRPA------KSIEGFKTTY-------------ENVDLVLIRENTEGEYSGIEH---- 147 (354)
T ss_dssp -----CCCHHHHHHHHHTEEEEEEEE------ECCTTCCCSS-------------CSCEEEEEEECSSEEEEEEEE----
T ss_pred ----cccCchHHHHHHcCCEEEEEEe------cccCCCCCCC-------------CCccEEEEecCcCCcccCCcc----
Confidence 5789999999999999999999 8889998773 58999999 89999998753
Q ss_pred ceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhC-CCCEEEEeCCCccccccHHHHHHHHHHHHhhccCccccCC
Q 015124 167 ELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAG 244 (413)
Q Consensus 167 ~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~ 244 (413)
. .. ++++++ ++|||++++||+|+||+||++| ++|||+|||+|||+.|+|||+++|+||++ +|| +
T Consensus 148 --~----~~-~~~a~~~~~~T~~~~eRiar~AFe~A~~r~rkkVt~v~KaNvlk~sdglf~~~~~eva~-eyp------d 213 (354)
T 3blx_B 148 --I----VC-PGVVQSIKLITRDASERVIRYAFEYARAIGRPRVIVVHKSTIQRLADGLFVNVAKELSK-EYP------D 213 (354)
T ss_dssp --E----CS-TTEEEEEEEEEHHHHHHHHHHHHHHHHHTTCSEEEEEESCTTTCHHHHHHHHHHHHHGG-GCT------T
T ss_pred --c----cc-CCEEEEEEEEcHHHHHHHHHHHHHHHHhcCCCeEEEEECCcchHhHHHHHHHHHHHHHH-HCC------C
Confidence 1 11 568999 9999999999999999999999 56799999999999999999999999997 899 9
Q ss_pred eEEeeeeHHHHHHHHHhCCCce---EEEecCCchhhhhhhHhhh-cCCcccccccccCCCCceEEEcccccccccccccc
Q 015124 245 IWYEHRLIDDMVAYALKSEGGY---VWACKNYDGDVQSDFLAQG-FGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVH 320 (413)
Q Consensus 245 I~~~~~~VD~~a~~Lv~~P~~F---Viv~~NlfGDILSDlaa~l-~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~d 320 (413)
|+++|+|||+||||||++|++| ||||+|||||||||++|++ +||+||+||+|||+++ +||||+||||| |
T Consensus 214 I~~~~~~vD~~~m~lv~~P~~FD~~Vivt~NlfGDIlSD~aa~l~~GslGl~pSanig~~~--a~fEp~HGSAP-----d 286 (354)
T 3blx_B 214 LTLETELIDNSVLKVVTNPSAYTDAVSVCPNLYGDILSDLNSGLSAGSLGLTPSANIGHKI--SIFEAVHGSAP-----D 286 (354)
T ss_dssp SEEEEEEHHHHHHHHHHCGGGGTTEEEEECHHHHHHHHHHHHHHHTSSGGGCEEEEEESSC--EEEEECSCCCG-----G
T ss_pred ceEEEEEHHHHHHHHhhChhhCCceEEEecCcccchhHHHHHhhccCCccccceeEECCCc--eEEecCCCChh-----h
Confidence 9999999999999999999999 9999999999999999999 9999999999999984 89999999999 9
Q ss_pred ccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC--CCCcchhhhhcCCcCCCccccCHHHHH
Q 015124 321 QKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG--KMTKDLALIIHGSKMTREHYLNTEEFI 398 (413)
Q Consensus 321 iaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G--~~T~Dlg~~~~G~~~~~~~~~sT~e~~ 398 (413)
|||||+ |||+|+|||++|||+|||+ .++|++|++||.+++++| ++|+||| | .++|+||+
T Consensus 287 iAGk~i-ANP~A~IlS~ammL~~lg~-------~~~A~~Ie~Av~~~l~~g~~~~T~Dlg----G-------~~~T~e~~ 347 (354)
T 3blx_B 287 IAGQDK-ANPTALLLSSVMMLNHMGL-------TNHADQIQNAVLSTIASGPENRTGDLA----G-------TATTSSFT 347 (354)
T ss_dssp GTTTTC-CCTHHHHHHHHHHHHHHTC-------HHHHHHHHHTHHHHHTSSTTSSCGGGT----C-------CCCHHHHH
T ss_pred hcCCCc-cCcHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHcCCCccCCCcC----C-------CCCHHHHH
Confidence 999999 9999999999999999996 789999999999999999 8999997 6 68999999
Q ss_pred HHHHHHH
Q 015124 399 DAVADDL 405 (413)
Q Consensus 399 daV~~~l 405 (413)
|+|+++|
T Consensus 348 dav~~~l 354 (354)
T 3blx_B 348 EAVIKRL 354 (354)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 9999864
No 21
>2e0c_A 409AA long hypothetical NADP-dependent isocitrate dehydrogenase; homedimer, oxidoreductase; 2.00A {Sulfolobus tokodaii str} PDB: 2dht_A 2e5m_A*
Probab=100.00 E-value=2e-103 Score=801.68 Aligned_cols=351 Identities=19% Similarity=0.204 Sum_probs=304.9
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcc
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~-------~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~ 82 (413)
++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||++||..
T Consensus 25 ~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~etl~~~k~~da~LkGav~tP~~ 104 (409)
T 2e0c_A 25 PVILYIEGDGIGPEITNAAIKVINKAVERAYGSSREIKWLEVYAGEKAEKLVNDRFPKETQEMLLKYRVVLKGPLETPIG 104 (409)
T ss_dssp BEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCCTHHHHHHHSCSSCHHHHHHHHHHCEEEECCCC----
T ss_pred ceEeeCCCCCcCHHHHHHHHHHHHHHHHhhcCCCCceEEEEEechHHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCCc
Confidence 57999999999999999999988654 38999999999999999999999999999999999999999999964
Q ss_pred hhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecC
Q 015124 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPE 160 (413)
Q Consensus 83 ~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~ 160 (413)
. +|+|+|++||++||||+|+||| +++||+++|++- .+++|+||| ||||+|+|.
T Consensus 105 ~---------~~~s~~l~LR~~LdlyanvRPv------~~~~g~~splk~----------~~~vDivIvREnteg~Y~g~ 159 (409)
T 2e0c_A 105 K---------GWKSVNVAIRLMLDLYANIRPV------KYIEGLESPLKH----------PEKVDMIIFRENTDDLYRGI 159 (409)
T ss_dssp -------------CHHHHHHHHTTCCEEEEEE------ECCTTCCCSBSC----------CTTCEEEEEEECSSGGGGCC
T ss_pred c---------cccChhHHHHHHcCCEEEEEEE------eccCCCCCCCCC----------ccCCcEEEEEcCCCCEeCCc
Confidence 3 5789999999999999999999 888999998741 358999999 899999998
Q ss_pred CCCcccc--eeeec-------ccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCC-CEEEEeCCCccccccHHHHHHHH
Q 015124 161 GKDEKTE--LEVYN-------FTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIFQ 229 (413)
Q Consensus 161 ~~~~~~~--~~~~~-------~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNVl~~t~glf~~~~~ 229 (413)
++....+ ..+.+ ....++++++ ++|||++++||+|+||+||++|++ |||+|||+|||+.|+|||+++|+
T Consensus 160 e~~~~~~~~~~v~~f~~~~~~~~~~~~~a~~~~~~t~~~~eRiar~AFe~A~~r~rkkVt~v~KaNVlk~sdglf~~~~~ 239 (409)
T 2e0c_A 160 EYPFNSEEAKKIRDFLRKELKVEIEDDTGIGIKVMSKYKTQRITRLAIQYAIEHKRKKVTIMHKGNVMKYTEGAFREWAY 239 (409)
T ss_dssp EECTTSHHHHHHHHHHHHHSCCCCCSSEEEEEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEECTTTSTTTHHHHHHHHH
T ss_pred ccccCCCcccchhhccchhccccCCCceEEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECccchhhhhhHHHHHHH
Confidence 6421110 00000 0001468999 999999999999999999999955 69999999999999999999999
Q ss_pred HHHHhhccCccc-----------cCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCccccccccc
Q 015124 230 EVYEANWKSKFE-----------AAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLV 297 (413)
Q Consensus 230 eva~~eYp~~~~-----------~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSani 297 (413)
|||+++||++|. +++|+++|+|||+||||||++|++| ||||+|||||||||++|+++||+||+||+||
T Consensus 240 eva~~eypd~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aa~l~GslGl~pSani 319 (409)
T 2e0c_A 240 EVALKEYRDFIVTEEEINQGKPDQGKIILNDRIADNMFQQIIIRPEEYDIILAPNVNGDYISDAAGALIGNIGMLGGANI 319 (409)
T ss_dssp HHHHHHSTTTEEEHHHHTTTCCCTTSEEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHTTSCGGGCEEEEE
T ss_pred HHHHHhCCCccccccccccccccCCeEEEEEEEHHHHHHHHhhCcccccEEEECCcchHHHHHHHHHhcCCcccCceEEE
Confidence 999757996442 2349999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCCceEEEccccccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcch
Q 015124 298 CPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDL 377 (413)
Q Consensus 298 g~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dl 377 (413)
|++ ++||||+||||| ||||||+ |||+|+|||++|||+|||+ .++|++|++||.+|+++|++|+||
T Consensus 320 g~~--~a~fEp~HGSAP-----diAGk~i-ANP~A~IlS~ammL~~lg~-------~~~A~~Ie~Av~~~l~~g~~T~Dl 384 (409)
T 2e0c_A 320 GDE--GGMFEAIHGTAP-----KYAGKNV-ANPTGIIKAGELMLRWMGW-------NEAADLIEKAINMAIRDKKVTQDI 384 (409)
T ss_dssp ETT--EEEEEESSCCCG-----GGTTTTC-SCTHHHHHHHHHHHHHHTC-------HHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred CCC--ceEEecCCCChh-----hhcCCcc-cCcHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHHHHcCCccccc
Confidence 976 699999999999 9999999 9999999999999999996 789999999999999999999999
Q ss_pred hhhhcCCcCCCccccCHHHHHHHHHHHHH
Q 015124 378 ALIIHGSKMTREHYLNTEEFIDAVADDLR 406 (413)
Q Consensus 378 g~~~~G~~~~~~~~~sT~e~~daV~~~l~ 406 (413)
++..+| +.++|+||+|+|+++|+
T Consensus 385 ~g~~g~------~~~~T~e~~daV~~~l~ 407 (409)
T 2e0c_A 385 ARFMGV------KALGTKEYADELIKIMD 407 (409)
T ss_dssp HHHHTS------CCCCHHHHHHHHHHHHT
T ss_pred cccCCC------CCcCHHHHHHHHHHHHh
Confidence 732113 26899999999999984
No 22
>2d1c_A Isocitrate dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus}
Probab=100.00 E-value=1.2e-103 Score=812.55 Aligned_cols=341 Identities=21% Similarity=0.201 Sum_probs=316.9
Q ss_pred Cccceecc----ccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccC-CCCCHHHHHHHHhCCeeEEcc
Q 015124 2 AFQKIKVA----NPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATD-DKVTVESAEATLKYNVAIKCA 76 (413)
Q Consensus 2 ~~~~~~m~----~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g-~~lp~~~~~ai~~~~v~lkg~ 76 (413)
-.+||+|. ++|++||||||||||+++++++|.+.+++|+|+++++|+++++++| +++|++++++|+++|++||||
T Consensus 8 ~~~~i~~~~~g~~~IavipGDGIGpEV~~~a~~VL~a~~~~ie~~~~~~G~~~~~~~G~~~lp~etle~ik~~daiLkGa 87 (496)
T 2d1c_A 8 TGKKMHVLEDGRKLITVIPGDGIGPECVEATLKVLEAAKAPLAYEVREAGASVFRRGIASGVPQETIESIRKTRVVLKGP 87 (496)
T ss_dssp TSCEEEECTTSCEEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCSHHHHTTTCTTSCCHHHHHHHHHHCEEEECC
T ss_pred CCceeEeccCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHhccCCCcCcHHHHHHHHHCCEEEECC
Confidence 35788887 8999999999999999999999998899999999999999999999 999999999999999999999
Q ss_pred cCCCcchhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eec
Q 015124 77 TITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLS 154 (413)
Q Consensus 77 ~~~p~~~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nte 154 (413)
+++|.+. +|+|+|++||++||||+|+||| +++||+++|++ .+++|+||| |||
T Consensus 88 vgtP~~~---------~~~s~~l~LRk~LdLyaNlRP~------k~~pgl~splk-----------~~~vD~vIVREnTE 141 (496)
T 2d1c_A 88 LETPVGY---------GEKSANVTLRKLFETYANVRPV------REFPNVPTPYA-----------GRGIDLVVVRENVE 141 (496)
T ss_dssp CCCCSSS---------SSCCHHHHHHHHTTCCEEEEEE------ECBTTBCCTTT-----------TSCCEEEEEEECSS
T ss_pred ccCCCcc---------cccChHHHHHHHhCCEEEEEEE------eecCCCCcccc-----------CCCccEEEEeeCcC
Confidence 9999753 6889999999999999999999 88999988864 158999999 799
Q ss_pred eeeecCCCCcccceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhC-CCCEEEEeCCCccccccHHHHHHHHHHH
Q 015124 155 VFDVPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVY 232 (413)
Q Consensus 155 G~Y~g~~~~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNVl~~t~glf~~~~~eva 232 (413)
|+|+|.++ . .+ ++++++ ++|||++++||+|+||+||++| ++|||+|||+|||+.|+|||+++|+||+
T Consensus 142 G~Y~G~e~------~----~~-~~va~~~~v~Tr~~ieRIar~AFe~A~~r~rkkVT~V~KaNVlk~sdGlfr~v~~eVa 210 (496)
T 2d1c_A 142 DLYAGIEH------M----QT-PSVAQTLKLISWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQVA 210 (496)
T ss_dssp BGGGCCEE------E----EE-TTEEEEEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEECTTTCTTHHHHHHHHHHHHH
T ss_pred ceEeceeE------e----cC-CCeEEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECCCchhhHHHHHHHHHHHHH
Confidence 99998753 1 12 579999 9999999999999999999999 5689999999999999999999999998
Q ss_pred HhhccCccccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccc
Q 015124 233 EANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHG 311 (413)
Q Consensus 233 ~~eYp~~~~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HG 311 (413)
+ +|| +|+++|+|||+||||||++|++| ||||+|||||||||++|+++||+||+||+|||+++ +||||+||
T Consensus 211 ~-eYP------dI~~e~~~VD~~amqLV~~P~~FDVIVt~NLfGDILSDlaA~l~GslGlapSanig~~~--a~FEpvHG 281 (496)
T 2d1c_A 211 Q-EYP------DIEAVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIGNEV--AIFEAVHG 281 (496)
T ss_dssp T-TCT------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHTTTTCGGGCEEEEECSSC--EEEEESSC
T ss_pred H-HCC------CceEEEEeHHHHHHHHhhCcCcceEEEECCcchHHHHHHHHHhcCCcccCcEEEECCCC--ceeeCCCC
Confidence 7 899 99999999999999999999999 99999999999999999999999999999999884 89999999
Q ss_pred cccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC-CCCcchhhhhcCCcCCCcc
Q 015124 312 TVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKMTREH 390 (413)
Q Consensus 312 SAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg~~~~G~~~~~~~ 390 (413)
||| ||||||+ |||+|+|||++|||+|||+ .++|++|++||.+++++| ++|+||| |. .+
T Consensus 282 SAP-----DIAGk~i-ANP~A~IlSaamML~hlG~-------~~~A~~Ie~AV~~vl~~G~~~T~DLg----g~----~~ 340 (496)
T 2d1c_A 282 SAP-----KYAGKNV-INPTAVLLSAVMMLRYLEE-------FATADLIENALLYTLEEGRVLTGDVV----GY----DR 340 (496)
T ss_dssp CCT-----TTTTSSC-CCCHHHHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHHTSSCBHHHH----CT----TT
T ss_pred chh-----hhcCCCc-cCcHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHcCCeeccccC----CC----CC
Confidence 999 9999999 9999999999999999996 789999999999999999 9999998 41 02
Q ss_pred ccCHHHHHHHHHHHHHHHh
Q 015124 391 YLNTEEFIDAVADDLRARL 409 (413)
Q Consensus 391 ~~sT~e~~daV~~~l~~~~ 409 (413)
.++|+||+|+|+++|++++
T Consensus 341 ~~sT~e~~daV~~~L~~~~ 359 (496)
T 2d1c_A 341 GAKTTEYTEAIIQNLGKTP 359 (496)
T ss_dssp CBCHHHHHHHHHHTTTCCC
T ss_pred CcCHHHHHHHHHHHHhhhh
Confidence 5799999999999996543
No 23
>2iv0_A Isocitrate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, domain swapping, phosphorylation, aromatic cluster, NADP; 2.5A {Archaeoglobus fulgidus}
Probab=100.00 E-value=1.3e-103 Score=803.07 Aligned_cols=351 Identities=21% Similarity=0.203 Sum_probs=311.3
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcC----CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhh
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARV 85 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~ 85 (413)
++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||++||...
T Consensus 28 ~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~etl~~~k~~da~LkGav~tP~~~-- 105 (412)
T 2iv0_A 28 PIIPYFEGDGIGKDVVPAAIRVLDAAADKIGKEVVWFQVYAGEDAYKLYGNYLPDDTLNAIKEFRVALKGPLTTPVGG-- 105 (412)
T ss_dssp BEEEEECCSTTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSHHHHHHHSCSSCHHHHHHHHHHCEEEECCCCCCSSS--
T ss_pred CEEEEECCCCcCHHHHHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCCCc--
Confidence 56999999999999999999998765 899999999999999999999999999999999999999999999653
Q ss_pred HHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCC
Q 015124 86 KEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKD 163 (413)
Q Consensus 86 ~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~ 163 (413)
+++|+|++||++||||+|+||| +++||+++|++- .+++|+||| ||||+|+|.++.
T Consensus 106 -------~~~s~~l~LR~~Ldlyan~RPv------~~~~g~~splk~----------~~~vDivIvREnTeg~Y~G~e~~ 162 (412)
T 2iv0_A 106 -------GYRSLNVTIRQVLDLYANVRPV------YYLKGVPSPIKH----------PEKVNFVIFRENTEDVYAGIEWP 162 (412)
T ss_dssp -------SSSHHHHHHHHHTTCCEEEEEE------ECCTTSCCSBSC----------GGGCEEEEEEECSSSGGGCCEEC
T ss_pred -------cccChhHHHHHHcCCeEEEEEE------EecCCCCCCCCC----------cCCCCEEEEecCCCCEeCCcccc
Confidence 6889999999999999999999 888999998741 247999999 899999998642
Q ss_pred cccc--eeeecc-------cCCCceEEE-eecChHHHHHHHHHHHHHHHhCCC-CEEEEeCCCccccccHHHHHHHHHHH
Q 015124 164 EKTE--LEVYNF-------TGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIFQEVY 232 (413)
Q Consensus 164 ~~~~--~~~~~~-------~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNVl~~t~glf~~~~~eva 232 (413)
...+ ..+.++ ...++++++ ++|||++++||+|+||+||++|++ |||+|||+|||+.|+|||+++|+|||
T Consensus 163 ~~~~~~~~v~~~~~~~~~~~~~~~~a~~~~~~t~~~~eRiar~AFe~A~~r~rkkVt~v~KaNVlk~t~Glf~~~~~eva 242 (412)
T 2iv0_A 163 RGSEEALKLIRFLKNEFGVTIREDSGIGIKPISEFATKRLVRMAIRYAIENNRKSVTLVHKGNIMKYTEGAFRDWGYEVA 242 (412)
T ss_dssp TTCHHHHHHHHHHHHHHCCCCCTTEEEEEEEEEHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTCTTTHHHHHHHHHHHH
T ss_pred cCCccccchhhcccccccccCCCceEEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECccchhhhhHHHHHHHHHHH
Confidence 1110 000000 001468999 999999999999999999999965 69999999999999999999999999
Q ss_pred HhhccCccc--------------cCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCccccccccc
Q 015124 233 EANWKSKFE--------------AAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLV 297 (413)
Q Consensus 233 ~~eYp~~~~--------------~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSani 297 (413)
+++||++|. +++|+++|+|||+||||||++|++| ||||+|||||||||++|+++||+||+||+||
T Consensus 243 ~~eypd~~~~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aA~l~GslGlapsani 322 (412)
T 2iv0_A 243 KQEFGEYCITEDELWDKYGGKQPEGKIVVKDRIADNMFQQILTRTDEYDVIALPNLNGDYLSDAAAALIGGLGIAPGSNI 322 (412)
T ss_dssp HHHSTTTEECHHHHHHHHTTCCCTTCEEEEEEEGGGHHHHHHHSGGGCCEEEECHHHHHHHHHHHHHHTTCGGGCEEEEE
T ss_pred HHhCCCccccccchhhhccccccCCeEEEEEEEHHHHHHHHhhCcccccEEEECCcchHHHHHHHHHhcCCccccceEEE
Confidence 757996542 2349999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCCceEEEccccccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcch
Q 015124 298 CPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDL 377 (413)
Q Consensus 298 g~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dl 377 (413)
|++ ++||||+||||| ||||||+ |||+|+|||++|||+|||+ .++|++|++||.+++++|++|+||
T Consensus 323 g~~--~a~fEp~HGSAP-----diAGk~i-ANP~A~IlS~amML~~lg~-------~~~A~~Ie~Av~~~l~~g~~T~Dl 387 (412)
T 2iv0_A 323 GDG--IGVFEPVHGSAP-----KYAGQNK-VNPTAEILTGALMFEYIGW-------KDASEMIKKAVEMTISSGIVTYDI 387 (412)
T ss_dssp ETT--EEEEEESSCCCS-----TTTTSSC-SCCHHHHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHTTEECHHH
T ss_pred CCC--ceEEeCCCCChh-----hcCCCcc-cCcHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHHHHcCCccccc
Confidence 976 699999999999 9999999 9999999999999999996 789999999999999999999999
Q ss_pred hhhhcCCcCCCccccCHHHHHHHHHHHHH
Q 015124 378 ALIIHGSKMTREHYLNTEEFIDAVADDLR 406 (413)
Q Consensus 378 g~~~~G~~~~~~~~~sT~e~~daV~~~l~ 406 (413)
+...+| +.+||+||+|+|+++|+
T Consensus 388 ~~~~G~------~~~~T~e~~daV~~~l~ 410 (412)
T 2iv0_A 388 HRHMGG------TKVGTREFAEAVVENLQ 410 (412)
T ss_dssp HHHHCS------EECCHHHHHHHHHHHHH
T ss_pred ccccCC------CCcCHHHHHHHHHHHHh
Confidence 621113 25899999999999995
No 24
>3blx_A Isocitrate dehydrogenase [NAD] subunit 1; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_A 3blv_A*
Probab=100.00 E-value=1.9e-103 Score=786.38 Aligned_cols=324 Identities=18% Similarity=0.179 Sum_probs=299.8
Q ss_pred cccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhhHHH
Q 015124 9 ANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEF 88 (413)
Q Consensus 9 ~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~~~ 88 (413)
.++|++|||||||||||++++++|.+.+++|+|+++++|+ ++|+++|++++++|+++|++||||+++|...
T Consensus 17 ~~~I~vipGDGIGpEv~~~~~~Vl~a~~~~i~~~~~~~G~----~~g~~lp~~tl~~~~~~da~l~Gav~~P~~~----- 87 (349)
T 3blx_A 17 RFTVTLIPGDGVGKEITDSVRTIFEAENIPIDWETINIKQ----TDHKEGVYEAVESLKRNKIGLKGLWHTPADQ----- 87 (349)
T ss_dssp CEEEEEEEESHHHHHHHHHHHHHHHHTTCSEEEEECCCSS----TTCHHHHHHHHHHHHHHSEEEEEECCSHHHH-----
T ss_pred ceEEEEECCCCcCHHHHHHHHHHHHHcCCCeEEEEEecCc----ccCCcCcHHHHHHHHHCCEEEECCccCCCCC-----
Confidence 4799999999999999999999999889999999999997 7999999999999999999999999999421
Q ss_pred HhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCCccc
Q 015124 89 VLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKDEKT 166 (413)
Q Consensus 89 ~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~~~~ 166 (413)
.+++|+|++|||+||||+|+||| +++||+++|+ +++|+||| ||||+|+|.++
T Consensus 88 ---~~~~s~~l~lR~~ldlyan~RP~------~~~pg~~~~~-------------~~vD~vivREnteg~Y~g~e~---- 141 (349)
T 3blx_A 88 ---TGHGSLNVALRKQLDIYANVALF------KSLKGVKTRI-------------PDIDLIVIRENTEGEFSGLEH---- 141 (349)
T ss_dssp ---HTCHHHHHHHHHTSCEEEEEEEE------ECCTTCCCSS-------------CSCEEEEEEECSSGGGGCEEE----
T ss_pred ---CCccCchHHHHHHcCCEEEEEEE------eccCCCCCCC-------------CCcCEEEEecCCCCcEeCCce----
Confidence 15778999999999999999999 8889998773 58999999 89999998743
Q ss_pred ceeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhC-CCCEEEEeCCCccccccHHHHHHHHHHHHhhccCccccCC
Q 015124 167 ELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAG 244 (413)
Q Consensus 167 ~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~ 244 (413)
. .. ++++++ ++|||++++||+|+||+||++| ++|||+|||+|||+.|+|||+++|+||++++|| +
T Consensus 142 --~----~~-~gva~~~~~~T~~~~eRiar~AF~~A~~r~rkkVt~v~KaNvlk~sdglf~~~~~eva~~eyp------~ 208 (349)
T 3blx_A 142 --E----SV-PGVVESLKVMTRPKTERIARFAFDFAKKYNRKSVTAVHKANIMKLGDGLFRNIITEIGQKEYP------D 208 (349)
T ss_dssp --E----CS-TTEEEEEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEECTTTSTTHHHHHHHHHHHHHHHHCT------T
T ss_pred --e----cc-CCeEEEEEEeCHHHHHHHHHHHHHHHHhcCCCcEEEEeCCccchhhHHHHHHHHHHHHHhhCC------C
Confidence 1 11 468999 9999999999999999999999 567999999999999999999999999933899 9
Q ss_pred eEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEcccc-cccccccccccc
Q 015124 245 IWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAH-GTVTRHYRVHQK 322 (413)
Q Consensus 245 I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~H-GSAp~~~~~dia 322 (413)
|+++|+|||+||||||++|++| ||||+|||||||||++|+++||+||+||+|||+++ +||||+| |||| |||
T Consensus 209 i~~~~~~vD~~~~qlv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig~~~--a~fEpvH~GSAP-----diA 281 (349)
T 3blx_A 209 IDVSSIIVDNASMQAVAKPHQFDVLVTPSMYGTILGNIGAALIGGPGLVAGANFGRDY--AVFEPGSRHVGL-----DIK 281 (349)
T ss_dssp SEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEEESSC--EEECCTTTTSCC-------C
T ss_pred eeEEEeeHHHHHHHHhhCcccccEEEECCcchHHHHHHHHhhcCCcccceEEEECCCc--eeEcCCCCCchh-----hhc
Confidence 9999999999999999999999 99999999999999999999999999999999884 8999999 9999 999
Q ss_pred CCCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC-CCCcchhhhhcCCcCCCccccCHHHHHHHH
Q 015124 323 GGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKMTREHYLNTEEFIDAV 401 (413)
Q Consensus 323 Gk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV 401 (413)
|||+ |||+|+|||++|||+|||+ .++|++|++||.+++++| ++|+||| | .+||+||+|+|
T Consensus 282 Gk~i-ANP~A~IlS~ammL~~lg~-------~~~A~~Ie~Av~~~l~~G~~~T~Dlg----g-------~~~T~e~~daI 342 (349)
T 3blx_A 282 GQNV-ANPTAMILSSTLMLNHLGL-------NEYATRISKAVHETIAEGKHTTRDIG----G-------SSSTTDFTNEI 342 (349)
T ss_dssp CTTC-SCCHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHSSSSCBGGGT----C-------CBCHHHHHHHH
T ss_pred CCCC-CCcHHHHHHHHHHHHhcCc-------HHHHHHHHHHHHHHHHcCCccCCCcC----C-------CCCHHHHHHHH
Confidence 9999 9999999999999999996 589999999999999999 8999997 6 68999999999
Q ss_pred HHHHH
Q 015124 402 ADDLR 406 (413)
Q Consensus 402 ~~~l~ 406 (413)
+++|+
T Consensus 343 ~~~l~ 347 (349)
T 3blx_A 343 INKLS 347 (349)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99985
No 25
>1w0d_A 3-isopropylmalate dehydrogenase; oxidoreductase, leucine biosynthesis, NAD, ST genomics, PSI, protein structure initiative; 1.65A {Mycobacterium tuberculosis} SCOP: c.77.1.1 PDB: 2g4o_A
Probab=100.00 E-value=9.8e-103 Score=779.19 Aligned_cols=330 Identities=18% Similarity=0.183 Sum_probs=299.3
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcchhhHHHH
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFV 89 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~~~~~~~~ 89 (413)
++|++|||||||||||++++++|.+...+|+|+++++|+++++++|+++|++++++|+++|++||||+++|.... .
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~G~~~~~~~g~~lp~~t~~~~~~~da~l~Gav~~P~~~~--~-- 77 (337)
T 1w0d_A 2 SKLAIIAGDGIGPEVTAEAVKVLDAVVPGVQKTSYDLGARRFHATGEVLPDSVVAELRNHDAILLGAIGDPSVPS--G-- 77 (337)
T ss_dssp CEEEEEEESTTHHHHHHHHHHHHHHHSTTCEEEECCCSHHHHHHHSCSSCHHHHHHHTTSSEEEEEECCCTTSCT--T--
T ss_pred cEEEEeCCCCcCHHHHHHHHHHHHHhcCCcEEEEEecchHHHhhhCCcCCHHHHHHHHHCCEEEECCccCCCCCC--c--
Confidence 689999999999999999999987665579999999999999999999999999999999999999999995321 0
Q ss_pred hhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecCCCCcccc
Q 015124 90 LKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPEGKDEKTE 167 (413)
Q Consensus 90 ~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~~~~~~~~ 167 (413)
.+++|+|++|||+||||+|+||| +++||+++|++- . .+ +|+||| ||||+|+|.++.
T Consensus 78 --~~~~s~~l~lR~~ldlyan~RP~------~~~pg~~s~l~~-~--------~~-~DivivREnteg~Y~g~e~~---- 135 (337)
T 1w0d_A 78 --VLERGLLLRLRFELDHHINLRPA------RLYPGVASPLSG-N--------PG-IDFVVVREGTEGPYTGNGGA---- 135 (337)
T ss_dssp --HHHHHTHHHHHHHTTCCEEEEEE------ECCTTCCCSBTT-C--------CC-CEEEEEEECSCSGGGCCEEE----
T ss_pred --ccccchHHHHHHHcCCEEEEEEe------ecCCCCCCcccC-C--------CC-CcEEEEecCCCCeecCCcce----
Confidence 13578899999999999999999 888999888741 1 23 999999 799999998541
Q ss_pred eeeecccC-CCceEEE-eecChHHHHHHHHHHHHHHHhCCCCEEEEeCCCccccccHHHHHHHHHHHHhhccCccccCCe
Q 015124 168 LEVYNFTG-EGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGI 245 (413)
Q Consensus 168 ~~~~~~~~-~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~I 245 (413)
+. .+ .++++++ ++|||++++||+|+||+||++|++|||+|||+|||+.|+|||+++|+||++ +|| +|
T Consensus 136 --~~--~g~~~~~a~~~~~~T~~~~eRiar~AFe~A~~rrkkVt~v~KaNvlk~s~glf~~~~~eva~-eyp------~i 204 (337)
T 1w0d_A 136 --IR--VGTPNEVATEVSVNTAFGVRRVVADAFERARRRRKHLTLVHKTNVLTFAGGLWLRTVDEVGE-CYP------DV 204 (337)
T ss_dssp --ES--TTSTTCEEEEEEEEEHHHHHHHHHHHHHHHHHTTSEEEEEECTTTSHHHHHHHHHHHHHHHT-TCT------TS
T ss_pred --ec--CCCCCCeEEEEEEEcHHHHHHHHHHHHHHHHHcCCeEEEEECCccchhhhHHHHHHHHHHHH-HCC------ce
Confidence 11 12 2468999 999999999999999999999988999999999999999999999999997 899 99
Q ss_pred EEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCc-eEEEccccccccccccccccC
Q 015124 246 WYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGK-TIEAEAAHGTVTRHYRVHQKG 323 (413)
Q Consensus 246 ~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~-~a~FEp~HGSAp~~~~~diaG 323 (413)
+++|+|||+||||||++|++| ||||+|||||||||++|+++||+||+||+|||+++. ++||||+||||| ||||
T Consensus 205 ~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~psanig~~~~~~a~fEp~HGSAP-----diAG 279 (337)
T 1w0d_A 205 EVAYQHVDAATIHMITDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATRANPSMFEPVHGSAP-----DIAG 279 (337)
T ss_dssp EEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCGGGCEEEEECTTCSSCEEEEESSCCCG-----GGTT
T ss_pred EEEEEEHHHHHHHHhhCcccccEEEECcchhHHHHHHHhhhcCCcccCceeEeCCCCCCceEEecCCCChh-----hhCC
Confidence 999999999999999999999 999999999999999999999999999999998641 599999999999 9999
Q ss_pred CCCccChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHHHHHHH
Q 015124 324 GETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVAD 403 (413)
Q Consensus 324 k~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~ 403 (413)
||+ |||+|+|||++|||+|||+ .++|++|++||.+|+++| | |. .+||+||+|+|++
T Consensus 280 k~i-ANP~A~IlS~ammL~~lg~-------~~~A~~Ie~Av~~~l~~g------g----g~------~~~T~e~~~av~~ 335 (337)
T 1w0d_A 280 QGI-ADPTAAIMSVALLLSHLGE-------HDAAARVDRAVEAHLATR------G----SE------RLATSDVGERIAA 335 (337)
T ss_dssp SSC-SCCHHHHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHHC------T----TC------CCCHHHHHHHHHH
T ss_pred CCC-cCCHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHcC------C----CC------CcCHHHHHHHHHh
Confidence 999 9999999999999999986 789999999999999998 5 52 5799999999998
Q ss_pred HH
Q 015124 404 DL 405 (413)
Q Consensus 404 ~l 405 (413)
+|
T Consensus 336 ~l 337 (337)
T 1w0d_A 336 AL 337 (337)
T ss_dssp TC
T ss_pred hC
Confidence 64
No 26
>2d4v_A Isocitrate dehydrogenase; alpha and beta protein, isocitrate/isopropylmalate dehydrogenase-like fold, oxidoreductase; HET: FLC NAD; 1.90A {Acidithiobacillus thiooxidans}
Probab=100.00 E-value=2.2e-102 Score=796.88 Aligned_cols=349 Identities=20% Similarity=0.186 Sum_probs=308.7
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhccCC--CCCHHHHHHHHhCCeeEEcccCCC
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDD--KVTVESAEATLKYNVAIKCATITP 80 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~-------~~~i~~~~~~~g~~~~~~~g~--~lp~~~~~ai~~~~v~lkg~~~~p 80 (413)
++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+ ++|++++++|+++|++||||++||
T Consensus 27 ~~I~vipGDGIGpEV~~aa~~Vl~a~~~~~~~~~~~i~~~~~~~G~~~~~~~G~~~~lp~etl~~~k~~da~lkGav~tP 106 (429)
T 2d4v_A 27 PIIPFIEGDGIGCDVTPAMRSVVDAAVAKVYGGQRQIAWMELFAGQKAVQLYGEGQYLPDETMAAIREYKVAIKGPLETP 106 (429)
T ss_dssp BEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEEECCTHHHHHHHCTTCSSCHHHHHHHHHHCEEEECCCCCC
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHHHhhcCCCCceEEEEEeeehhhhhccCCCCCCcHHHHHHHHHCCEEEECCccCC
Confidence 66999999999999999999988654 389999999999999999999 999999999999999999999999
Q ss_pred cchhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeee
Q 015124 81 DEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDV 158 (413)
Q Consensus 81 ~~~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~ 158 (413)
... +|+|+|++||++||||+|+||| +++||+++|++- .+++|+||| ||||+|+
T Consensus 107 ~~~---------~~~s~~l~LRk~LdLyanvRPv------~~~~gv~splk~----------~~~vDivIvREnTeg~Y~ 161 (429)
T 2d4v_A 107 VGG---------GIRSLNVAMRQDLDLYVCLRPV------RYFEGTPSPMRH----------PEKVDMVIFRENSEDIYA 161 (429)
T ss_dssp SSS---------SSCCHHHHHHHHTTCCEEEEEE------ECCTTCCCSBSC----------GGGCEEEEEEECSCGGGG
T ss_pred Ccc---------cccChhHHHHHHcCCEEEEEEE------EecCCCCCCCCC----------cCCCCEEEEEeCCCCeec
Confidence 643 6889999999999999999999 888999998741 247999999 8999999
Q ss_pred cCCCCcccc--------------eeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhCCC-CEEEEeCCCccccccH
Q 015124 159 PEGKDEKTE--------------LEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDG 222 (413)
Q Consensus 159 g~~~~~~~~--------------~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNVl~~t~g 222 (413)
|.++....+ ....++ .++++++ ++|||++++||+|+||+||++|++ |||+|||+|||+.|+|
T Consensus 162 G~e~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~a~~~~~~T~~~~eRIar~AFe~A~~r~rkkVT~v~KaNVlk~tdG 239 (429)
T 2d4v_A 162 GIEWPAGSPEAEKIIRFLREEMGVTKIRF--PDSSAIGIKPVSTEGSERLIRRTIQYALEHGKPSVSLVHKGNIMKFTEG 239 (429)
T ss_dssp CCEECTTCHHHHHHHHHHHHTSCCCCCSC--GGGEEEEEEEEEHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTSTTTHH
T ss_pred CcccccCCcccccceeccccccccccccC--CCceEEEEEEecHHHHHHHHHHHHHHHHhcCCCeEEEEECCccchhhhH
Confidence 986421110 000000 1468999 999999999999999999999955 6999999999999999
Q ss_pred HHHHHHHHHHHhhccCccc--------------------------cCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCch
Q 015124 223 RFKDIFQEVYEANWKSKFE--------------------------AAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDG 275 (413)
Q Consensus 223 lf~~~~~eva~~eYp~~~~--------------------------~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfG 275 (413)
||+++|+|||+++||+.|. +++|+++|+|||+||||||++|++| ||||+||||
T Consensus 240 lf~~~~~eva~~eypd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~fDVivt~NlfG 319 (429)
T 2d4v_A 240 GFRDWGYALAEREFAGRVFTWRQKAAISKAEGKAAGQKAEQQAIADGKLIIKDVIADNFLQQILLRPEDYSVVATLNLNG 319 (429)
T ss_dssp HHHHHHHHHHHHHSTTTEEEHHHHHHHHHHHCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHCGGGCCEEEECHHHH
T ss_pred HHHHHHHHHHHHhCCCccccccccccccccccccccchhccccccCCeeEEEEeeHHHHHHHHhhCcccCcEEEECCccc
Confidence 9999999999757996441 2349999999999999999999999 999999999
Q ss_pred hhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHH
Q 015124 276 DVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLD 355 (413)
Q Consensus 276 DILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~ 355 (413)
|||||++|+++|||||+||+|||++ ++||||+||||| ||||||+ |||+|+|||++|||+|||+ .+
T Consensus 320 DILSD~aA~l~GslGl~pSanig~~--~a~fEpvHGSAP-----diAGk~i-ANP~A~IlS~amML~hlg~-------~~ 384 (429)
T 2d4v_A 320 DYVSDALAAEVGGIGMAPGANLSDT--HAIFEATHGTAP-----DIAGQGK-ANPSSLILSAVMMLEHLGW-------GE 384 (429)
T ss_dssp HHHHHHHHHHTTCGGGCCCEEECSS--CEEEECSCCCCT-----TTTTTTC-CCCHHHHHHHHHHHHHTTC-------HH
T ss_pred HHHHHHHHHhcCCHhhcCeeEECCC--ceEEecCCCChh-----HhcCCCC-cCcHHHHHHHHHHHHHcCC-------HH
Confidence 9999999999999999999999976 599999999999 9999999 9999999999999999996 78
Q ss_pred HHHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHHHHHHHHH
Q 015124 356 FTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDL 405 (413)
Q Consensus 356 ~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l 405 (413)
+|++|++||.+++++|++|+|||+..+|. +.++|+||+|+|+++|
T Consensus 385 ~A~~Ie~Av~~~l~~g~~T~Dlg~~~~g~-----~~~~T~e~~daV~~~l 429 (429)
T 2d4v_A 385 AAQAIVAAMNATIAAGEVTGDLAALRGDV-----PALSTTEFTAALIRRF 429 (429)
T ss_dssp HHHHHHHHHHHHHHTTCEEHHHHTTCTTC-----CEECHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCccccccccCCCC-----CCcCHHHHHHHHHhhC
Confidence 99999999999999999999998321121 2479999999999764
No 27
>1hqs_A Isocitrate dehydrogenase; glyoxylate bypass, bsidh, tricarboxylic acid cycle, oxidoreductase, protein phosphorylation, NADP; HET: CME CIT; 1.55A {Bacillus subtilis} SCOP: c.77.1.1
Probab=100.00 E-value=1.3e-102 Score=797.97 Aligned_cols=350 Identities=21% Similarity=0.227 Sum_probs=309.1
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcc
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~-------~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~ 82 (413)
++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||++||..
T Consensus 20 ~~I~vipGDGIGpEI~~~a~~Vl~a~~~~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~etl~~~k~~da~lkGav~tP~~ 99 (423)
T 1hqs_A 20 PIIPFIEGDGTGPDIWNAASKVLEAAVEKAYKGEKKITWKEVYAGEKAYNKTGEWLPAETLDVIREYFIAIKGPLTTPVG 99 (423)
T ss_dssp BEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCCTHHHHHHHSCSSCHHHHHHHHHHCEEEECCCCCCSS
T ss_pred CEEEEECCCCcCHHHHHHHHHHHHHHHhhhcCCCCceEEEEEecCHHHHHhhCCcCcHHHHHHHHHCCEEEECCccCCCC
Confidence 66999999999999999999987654 38999999999999999999999999999999999999999999964
Q ss_pred hhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecC
Q 015124 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPE 160 (413)
Q Consensus 83 ~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~ 160 (413)
. +|+|+|++||++||||+|+||| +++||+++|++- ++++|+||| ||||+|+|.
T Consensus 100 ~---------~~~s~nl~LRk~LdlyanvRPv------~~~pg~~splk~----------~~~vDivIvREnteg~Y~G~ 154 (423)
T 1hqs_A 100 G---------GIRSLNVALRQELDLFVCLRPV------RYFTGVPSPVKR----------PEDTDMVIFRENTEDIYAGI 154 (423)
T ss_dssp S---------SSCCHHHHHHHHTTCCEEEEEE------ECCTTCCCSBSC----------GGGCEEEEEEECSCGGGGCC
T ss_pred c---------CcCChhHHHHHHcCCEEEEEEE------eccCCCCCCCCC----------CCCCcEEEEecCCCCeeccc
Confidence 3 6889999999999999999999 889999999751 248999999 899999998
Q ss_pred CCCcccc--------------eeeecccCCCceEEE-eecChHHHHHHHHHHHHHHHhC-CCCEEEEeCCCccccccHHH
Q 015124 161 GKDEKTE--------------LEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRF 224 (413)
Q Consensus 161 ~~~~~~~--------------~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNVl~~t~glf 224 (413)
++....+ ....++ . ++++++ ++|||++++||+|+||+||++| ++|||+|||+|||+.|+|||
T Consensus 155 e~~~g~~~~~~v~~~~~~~~~~~~~~~-~-~~~a~~~~~~T~~~~eRiar~AFe~A~~r~rkkVt~v~KaNVlk~t~Glf 232 (423)
T 1hqs_A 155 EYAKGSEEVQKLISFLQNELNVNKIRF-P-ETSGIGIKPVSEEGTSRLVRAAIDYAIEHGRKSVTLVHKGNIMKFTEGAF 232 (423)
T ss_dssp EECTTCHHHHHHHHHHHHHSCCCCCSC-G-GGEEEEEEEEEHHHHHHHHHHHHHHHHHHTCSEEEEEECTTTSTTTHHHH
T ss_pred ccccCCccccceecccccccccccccc-C-CceEEEEEEEcHHHHHHHHHHHHHHHHHcCCCcEEEEECCccchhhhHHH
Confidence 6421110 000000 1 468999 9999999999999999999998 56799999999999999999
Q ss_pred HHHHHHHHHhhccCcc--------------------------ccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhh
Q 015124 225 KDIFQEVYEANWKSKF--------------------------EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDV 277 (413)
Q Consensus 225 ~~~~~eva~~eYp~~~--------------------------~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDI 277 (413)
+++|+|||+++||+.. .+++|+++|+|||+||||||++|++| ||||+||||||
T Consensus 233 ~~~~~eva~~eypd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDI 312 (423)
T 1hqs_A 233 KNWGYELAEKEYGDKVFTWAQYDRIAEEQGKDAANKAQSEAEAAGKIIIKDSIADIFLQQILTRPNEFDVVATMNLNGDY 312 (423)
T ss_dssp HHHHHHHHHHHHGGGEEEHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHH
T ss_pred HHHHHHHHHHhCCCcccchhhhccccccccccccccccccccccCeEEEEEeeHHHHHHHHhhCCCCccEEEECCcchHH
Confidence 9999999975799521 33459999999999999999999999 99999999999
Q ss_pred hhhhHhhhcCCcccccccccCC-CCceEEEccccccccccccccccCCCCccChHHHHHHHHHHHHHhcccCCchhhHHH
Q 015124 278 QSDFLAQGFGSLGLMTSVLVCP-DGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDF 356 (413)
Q Consensus 278 LSDlaa~l~GslGlapSanig~-~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL~~lG~~~~~~~l~~~ 356 (413)
|||++|+++|||||+||+|||+ ++ ++||||+||||| ||||||+ |||+|+|||++|||+|||+ .++
T Consensus 313 LSD~aA~l~GslGl~pSanigp~~~-~alfEp~HGSAP-----diAGk~i-ANP~A~IlS~amML~hlg~-------~~~ 378 (423)
T 1hqs_A 313 ISDALAAQVGGIGIAPGANINYETG-HAIFEATHGTAP-----KYAGLDK-VNPSSVILSGVLLLEHLGW-------NEA 378 (423)
T ss_dssp HHHHHHHHTTCTTTCEEEEECTTTC-CEEEEESCCCCG-----GGTTTTC-SCCHHHHHHHHHHHHHHTC-------HHH
T ss_pred HHHHHHhhcCCcccCccceecCCCC-ceEEecCCCChh-----hhCCCCC-cCcHHHHHHHHHHHHHcCC-------HHH
Confidence 9999999999999999999994 33 699999999999 9999999 9999999999999999996 789
Q ss_pred HHHHHHHHHHHHhcCCCCcchhhhhcCCcCCCccccCHHHHHHHHHHHH
Q 015124 357 TEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDL 405 (413)
Q Consensus 357 A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l 405 (413)
|++|++||.+|+++|++|+||++..+| .+.++|+||+|+|+++|
T Consensus 379 A~~Ie~Av~~~l~~g~~T~Dl~g~~~g-----~~~~~T~e~~daV~~~l 422 (423)
T 1hqs_A 379 ADLVIKSMEKTIASKVVTYDFARLMDG-----ATEVKCSEFGEELIKNM 422 (423)
T ss_dssp HHHHHHHHHHHHHTTEECHHHHTTSSS-----CEECCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCcccccccccCC-----CCCcCHHHHHHHHHHhh
Confidence 999999999999999999999732112 12589999999999876
No 28
>1tyo_A Isocitrate dehydrogenase; enzyme-ethenonadp complex, oxidoreductase; HET: ENP; 2.15A {Aeropyrum pernix} PDB: 1v94_A 1xgv_A 1xkd_A*
Probab=100.00 E-value=4.6e-102 Score=795.75 Aligned_cols=351 Identities=19% Similarity=0.169 Sum_probs=309.4
Q ss_pred ccEEEECCCCccHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEcccCCCcc
Q 015124 10 NPIVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~-------~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~~~p~~ 82 (413)
++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||++||..
T Consensus 36 ~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~etl~~~k~~da~LkGav~tP~~ 115 (435)
T 1tyo_A 36 PVVAFIRGDGVGPEVVESALKVVDAAVKKVYGGSRRIVWWELLAGHLAREKCGELLPKATLEGIRLARVALKGPLETPVG 115 (435)
T ss_dssp BEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCCSHHHHHHHSSSSCHHHHHHHHHHSEEEECCCCCCTT
T ss_pred CEEEEECCCCcCHHHHHHHHHHHHHHHHhhcCCCcceEEEEEechHHHHHhhCCcCCHHHHHHHHhCCeEEECCccCCCc
Confidence 67999999999999999999988654 38999999999999999999999999999999999999999999964
Q ss_pred hhhHHHHhhccCCCcchhhhhhcCceEEeeeeeccCCccccCCCcchhhhHHHHHhhhcccCCcceEEe--eeceeeecC
Q 015124 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGMLLVINIEQLIQLFKDLANLNWCLVI--SLSVFDVPE 160 (413)
Q Consensus 83 ~~~~~~~~~~~~~s~~~~LRk~ldl~an~RPv~~~~~~~~~pg~~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~g~ 160 (413)
. +|+|+|++||++||||+|+||| +++ |+++|++- ++++|+||| ||||+|+|.
T Consensus 116 ~---------~~~s~~l~LRk~LdlyanlRPv------~~~-gv~splk~----------~~~vDivIvREnTeg~Y~G~ 169 (435)
T 1tyo_A 116 T---------GYRSLNVAIRQALDLYANIRPV------RYY-GQPAPHKY----------ADRVDMVIFRENTEDVYAGI 169 (435)
T ss_dssp S---------CTTHHHHHHHHHHTCCEEEEEE------ECC-SCCCSBTT----------GGGCEEEEEEECSSSGGGCC
T ss_pred c---------cccChhHHHHHHcCCEEEeEEE------Eec-CCCCCCCC----------cCCCcEEEEecCCCCeeccc
Confidence 3 6889999999999999999999 778 88888741 247999999 899999998
Q ss_pred CCCcccc--eeeecc-------cCCCceEEE-eecChHHHHHHHHHHHHHHHhC-CCCEEEEeCCCccccccHHHHHHHH
Q 015124 161 GKDEKTE--LEVYNF-------TGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQ 229 (413)
Q Consensus 161 ~~~~~~~--~~~~~~-------~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNVl~~t~glf~~~~~ 229 (413)
++....+ ..++++ ...+++|++ ++|||++++||+|+||+||++| ++|||+|||+|||+.|+|||+++|+
T Consensus 170 e~~~~~~~~~~v~~~~~~~~~~~~~~~~a~~~~~~T~~~~eRIar~AFe~A~~r~rkkVT~v~KaNVlk~tdGlf~~~~~ 249 (435)
T 1tyo_A 170 EWPHDSPEAARIRRFLAEEFGISIREDAGIGVKPISRFATRRLMERALEWALRNGNTVVTIMHKGNIMKYTEGAFMRWAY 249 (435)
T ss_dssp EECTTSHHHHHHHHHHHHHHCCCCCTTEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEEECTTTSTTTHHHHHHHHH
T ss_pred ccccCCccccceeccchhhccccCCCCeEEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECCccchhhhHHHHHHHH
Confidence 6421110 000000 001468999 9999999999999999999998 5679999999999999999999999
Q ss_pred HHHHhhccC-cc-------------ccCCeEEeeeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccc
Q 015124 230 EVYEANWKS-KF-------------EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTS 294 (413)
Q Consensus 230 eva~~eYp~-~~-------------~~~~I~~~~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapS 294 (413)
|||+++||+ .| .+++|+++|+|||+||||||++|++| ||||+|||||||||++|+++||+||+||
T Consensus 250 eva~~eypd~~~~e~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aA~l~GslGlapS 329 (435)
T 1tyo_A 250 EVALEKFREHVVTEQEVQEKYGGVRPEGKILVNDRIADNMLQQIITRPWDYQVIVAPNLNGDYISDAASALVGGIGMAAG 329 (435)
T ss_dssp HHHHHHSGGGEEEHHHHHHHSTTCCCTTCEEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCGGGCEE
T ss_pred HHHHHhCCCcccccccccccccccccCCeEEEEeeeHHHHHHHHhhCCCCceEEEEcccchHHHHHHHHhhcCCcccCce
Confidence 999757996 22 33459999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCceEEEccccccccccccccccCCCCccChHHHHHHHHHHH-HHhcccCCchhhHHHHHHHHHHHHHHHhcCCC
Q 015124 295 VLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGL-AHRAKLDNNARLLDFTEKLEAACIGTVESGKM 373 (413)
Q Consensus 295 anig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~A~IlS~ammL-~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G~~ 373 (413)
+|||++ .+||||+||||| ||||||+ |||+|+|||++||| +|||+ .++|++|++||.+|+++|++
T Consensus 330 anig~~--~a~fEpvHGSAP-----diAGk~i-ANP~A~IlS~amML~~hlg~-------~~~A~~Ie~Av~~~l~~g~~ 394 (435)
T 1tyo_A 330 MNMGDG--IAVAEPVHGTAP-----KYAGKDL-INPSAEILSASLLIGEFMGW-------REVKSIVEYAIRKAVQSKKV 394 (435)
T ss_dssp EEECSS--CEEEEESSCCCG-----GGTTSSC-SCCHHHHHHHHHHHHTTSCC-------HHHHHHHHHHHHHHHHTTCC
T ss_pred eeECCC--ceeeecCCCChH-----HhcCCCC-cCcHHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHcCCc
Confidence 999987 489999999999 9999999 99999999999999 99986 78999999999999999999
Q ss_pred CcchhhhhcCCcCCCccccCHHHHHHHHHHHHH
Q 015124 374 TKDLALIIHGSKMTREHYLNTEEFIDAVADDLR 406 (413)
Q Consensus 374 T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l~ 406 (413)
|+|||+..+| .+.+||+||+|+|+++|+
T Consensus 395 T~Dlgg~~~g-----~~~~~T~e~~daV~~~l~ 422 (435)
T 1tyo_A 395 TQDLARHMPG-----VQPLRTSEYTETLIAYID 422 (435)
T ss_dssp BHHHHTTSTT-----CCCBCHHHHHHHHHHHHH
T ss_pred CccccccCCC-----CCCcCHHHHHHHHHHHHh
Confidence 9999832112 125899999999999995
No 29
>1itw_A Isocitrate dehydrogenase; greece KEY motif, oxidoreductase; HET: ICT; 1.95A {Azotobacter vinelandii} SCOP: c.77.1.2 PDB: 1j1w_A*
Probab=97.32 E-value=0.0033 Score=65.68 Aligned_cols=190 Identities=14% Similarity=0.175 Sum_probs=133.1
Q ss_pred ceEEEeecChHHHHHHHHHHHHHHHhCCCC-EEEEeCCCccccccHHHHHHHHHHHHhhccCccccCCeEEeee-eHHHH
Q 015124 178 GVALSMYNTDESIRAFAEASMNTAYQKKWP-LYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHR-LIDDM 255 (413)
Q Consensus 178 ~va~~~~~Tr~~~eRiar~AFe~A~~r~~~-Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~I~~~~~-~VD~~ 255 (413)
+++..|.--..-++-+++.|.++||..+-+ |.-.|+. + .-=.+....|- .|=...+..++.+.-+ -++++
T Consensus 454 DIwRmcq~KDapI~DWVkLAV~Rar~sg~pavFWLD~~---R---aHDa~lI~kV~--~yL~~hdt~GLdi~Im~p~~A~ 525 (741)
T 1itw_A 454 DIWRMCQAKDAPIQDWVKLAVNRARATNTPAVFWLDPA---R---AHDAQVIAKVE--RYLKDYDTSGLDIRILSPVEAT 525 (741)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHTCCEEEECCTT---S---HHHHHHHHHHH--HHHTTSCCTTCCEEEECHHHHH
T ss_pred cchhhhhccCchHHHHHHHHHHHHHhcCCCeEEeeCCC---C---ccHHHHHHHHH--HHHHhcCCCCCceEeeCHHHHH
Confidence 455557677888999999999999999876 4444432 1 12234555552 3543455567777766 45665
Q ss_pred HHHH--HhCCCceEEEecCCchhhhhhhHh--hhcCCcccccccccCCCCceEEEcc-ccccccccccccc-cCCCCccC
Q 015124 256 VAYA--LKSEGGYVWACKNYDGDVQSDFLA--QGFGSLGLMTSVLVCPDGKTIEAEA-AHGTVTRHYRVHQ-KGGETSTN 329 (413)
Q Consensus 256 a~~L--v~~P~~FViv~~NlfGDILSDlaa--~l~GslGlapSanig~~~~~a~FEp-~HGSAp~~~~~di-aGk~i~AN 329 (413)
-.-| +++-..-+-||.|..=|+|+||.- .|.-|.=|+.=.=+=..| +|||. +.||||+|..+=+ .|.=. =+
T Consensus 526 ~~sleRir~G~dTISVTGNVLRDYLTDLFPIlELGTSAKMLSIVPLm~GG--GLfETGAGGSAPKHVqQ~~eEnhLR-WD 602 (741)
T 1itw_A 526 RFSLARIREGKDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMSGG--GLFETGAGGSAPKHVQQFLEEGYLR-WD 602 (741)
T ss_dssp HHHHHHHHTTCCCEEEECHHHHHHHHHHHHHHHHSCSSSSEEEEEBTTSC--EEEESCSSCCCHHHHHHHHHHSCCC-CC
T ss_pred HHHHHHHHcCCCeEEeechhhhhhccccchhhhhccchhHhhhcccccCC--ccccCCCCcCchHHHHHHHHcCccc-hh
Confidence 4333 445555588999999999999998 555554444322222234 89999 6799998875422 34444 78
Q ss_pred hHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC-CCCcchh
Q 015124 330 SIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLA 378 (413)
Q Consensus 330 P~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg 378 (413)
.+|-+|+.+--|+||+...+|++..-.|+.|++|..+.|+++ -..+-.|
T Consensus 603 SLGEFlALa~Sle~l~~~~~N~kA~vLa~tLD~At~~~L~n~KSPsRkvG 652 (741)
T 1itw_A 603 SLGEFLALAASLEHLGNAYKNPKALVLASTLDQATGKILDNNKSPARKVG 652 (741)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCSCCSSSS
T ss_pred hHHHHHHHHHhHHHHHhhcCChHHHHHHHHHHHHHHHHHhCCCCCCcccC
Confidence 999999999999999998888888889999999999999876 3344443
No 30
>2b0t_A NADP isocitrate dehydrogenase; monomeric, IDH, oxidoreductase; 1.75A {Corynebacterium glutamicum} PDB: 3mbc_A*
Probab=97.29 E-value=0.0039 Score=65.14 Aligned_cols=191 Identities=12% Similarity=0.154 Sum_probs=133.3
Q ss_pred CceEEEeecChHHHHHHHHHHHHHHHhCCCC-EEEEeCCCccccccHHHHHHHHHHHHhhccCccccCCeEEeee-eHHH
Q 015124 177 GGVALSMYNTDESIRAFAEASMNTAYQKKWP-LYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHR-LIDD 254 (413)
Q Consensus 177 ~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~-Vt~v~KaNVl~~t~glf~~~~~eva~~eYp~~~~~~~I~~~~~-~VD~ 254 (413)
.+++..|.--..-++-+++.|.++||..+-+ |.-.|+. + .-=.+....|- .|=...+..++.+.-+ -+++
T Consensus 449 GDIwRmcq~KDapI~DWVkLAV~Rar~sg~pavFWLD~~---R---aHDa~lI~kV~--~yL~~hdt~GLdi~Im~p~~A 520 (738)
T 2b0t_A 449 NDIWRACQVKDAPIQDWVKLAVTRSRLSGMPAVFWLDPE---R---AHDRNLASLVE--KYLADHDTEGLDIQILSPVEA 520 (738)
T ss_dssp TCEEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEECCTT---C---HHHHHHHHHHH--HHHTTSCCTTCCEEEECHHHH
T ss_pred CcchhhhhccCchHHHHHHHHHHHHHhcCCCeEEeeCCC---C---ccHHHHHHHHH--HHHHhcCCCCCceEeeCHHHH
Confidence 3455557677888999999999999999876 4434432 1 12234555552 3543455567777766 4566
Q ss_pred HHHHH--HhCCCceEEEecCCchhhhhhhHh--hhcCCcccccccccCCCCceEEEcc-ccccccccccccc-cCCCCcc
Q 015124 255 MVAYA--LKSEGGYVWACKNYDGDVQSDFLA--QGFGSLGLMTSVLVCPDGKTIEAEA-AHGTVTRHYRVHQ-KGGETST 328 (413)
Q Consensus 255 ~a~~L--v~~P~~FViv~~NlfGDILSDlaa--~l~GslGlapSanig~~~~~a~FEp-~HGSAp~~~~~di-aGk~i~A 328 (413)
+-.-| +++-..-+-||.|..=|+|+||.- .|.-|.=|+.=.=+=..| +|||. +.||||+|..+=+ .|.=. =
T Consensus 521 ~~~slerir~G~dTISVTGNVLRDYLTDLFPIlELGTSAKMLSIVPLm~GG--GLfETGAGGSAPKHVqQ~~eEnhLR-W 597 (738)
T 2b0t_A 521 TQLSIDRIRRGEDTISVTGNVLRDYNTDLFPILELGTSAKMLSVVPLMAGG--GLFETGAGGSAPKHVQQVQEENHLR-W 597 (738)
T ss_dssp HHHHHHHHHTTCCCEEEECHHHHHHHHHHHHHHHHSCSSSCEEEEEBTTSC--EEEECCSSCCCHHHHHHHHHHSCCC-C
T ss_pred HHHHHHHHHcCCCeEEeechhhhhhccccchhhhhccchhHhhhcccccCC--ccccCCCCcCchHHHHHHHHcCccc-h
Confidence 54333 445555588999999999999998 555554444322222234 89999 6799998875422 34444 7
Q ss_pred ChHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHHHhcC-CCCcchh
Q 015124 329 NSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLA 378 (413)
Q Consensus 329 NP~A~IlS~ammL~~lG~~~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg 378 (413)
+.+|-+|+.+--|+||+...+|++..-.|+.|++|..+.|+++ -..+-.|
T Consensus 598 DSLGEFlALa~Sle~l~~~~~N~kA~vLa~tLD~At~~~L~n~KSPsRkvG 648 (738)
T 2b0t_A 598 DSLGEFLALAESFRHELNNNGNTKAGVLADALDKATEKLLNEEKSPSRKVG 648 (738)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTCSCCSSTT
T ss_pred hhHHHHHHHHHhHHHHHhhcCChHHHHHHHHHHHHHHHHHhCCCCCCcccC
Confidence 8999999999999999988888888888999999999999876 3444443
No 31
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=92.31 E-value=0.078 Score=52.41 Aligned_cols=138 Identities=14% Similarity=0.028 Sum_probs=88.7
Q ss_pred eecChHHHHHHHHHHHHHHHhC-C--CCEEEEeCCCccccccHHHH-H-------HHHHHHHhhccCccccCCeEE-eee
Q 015124 183 MYNTDESIRAFAEASMNTAYQK-K--WPLYLSTKNTILKKYDGRFK-D-------IFQEVYEANWKSKFEAAGIWY-EHR 250 (413)
Q Consensus 183 ~~~Tr~~~eRiar~AFe~A~~r-~--~~Vt~v~KaNVl~~t~glf~-~-------~~~eva~~eYp~~~~~~~I~~-~~~ 250 (413)
..+|.+.+.+.++...+--+++ + ++-..|-==|==..-.|+|= | +.++..+ .+|.+ -..
T Consensus 173 ~~it~e~i~~~i~~~~~~L~~~fgi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~Pai~~~r~---------~Gi~~~GP~ 243 (328)
T 1yxo_A 173 DAISDERLTRVARILHADLRDKFGIAHPRILVCGLNPHAGEGGHLGREEIEVIEPCLERLRG---------EGLDLIGPL 243 (328)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTTCCSSCEEEEECSSGGGGTTTTTCSHHHHTHHHHHHHHHT---------TTCEEEEEE
T ss_pred HhcCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCCCCCCCCCHhHHHHHHHHHHHHHH---------CCCceeCCC
Confidence 5689999999999888855553 3 22223322333332234441 2 2333222 16766 477
Q ss_pred eHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCCCccC
Q 015124 251 LIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTN 329 (413)
Q Consensus 251 ~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~AN 329 (413)
=-|++-.+-.+ ++| ++|| || -|++-.-.--+|+--+.|+--.--.----|-||||- ||||||+ ||
T Consensus 244 paDT~F~~~~~--~~~D~vla--MY----HDQGlip~K~l~F~~gVNvTlGLP~iRTSvDHGTAf-----DIAGkG~-A~ 309 (328)
T 1yxo_A 244 PADTLFTPKHL--EHCDAVLA--MY----HDQGLPVLKYKGFGAAVNVTLGLPIIRTSVDHGTAL-----DLAGSGR-ID 309 (328)
T ss_dssp CHHHHTSHHHH--TTCSEEEE--SS----HHHHHHHHHHHHTTSCEEEEESSSSCEEEECSCCCG-----GGTTTCC-CC
T ss_pred Cchhhcccccc--cCCCEEEE--cc----cccccHhHhhcccCcceEEecCCCEEEecCCCCccc-----cccCCCC-CC
Confidence 78887655444 577 5554 33 588888888888888888742110234468999999 9999999 99
Q ss_pred hHHHHHHHHHHHHH
Q 015124 330 SIASIFAWSRGLAH 343 (413)
Q Consensus 330 P~A~IlS~ammL~~ 343 (413)
|.+|+-|.-+..+.
T Consensus 310 ~~Sl~~Ai~~A~~~ 323 (328)
T 1yxo_A 310 SGSLQVALETAYQM 323 (328)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 99999998766554
No 32
>4aty_A Terephthalate 1,2-CIS-dihydrodiol dehydrogenase; oxidoreductase; 1.85A {Burkholderia xenovorans LB400}
Probab=92.27 E-value=0.073 Score=52.99 Aligned_cols=133 Identities=11% Similarity=0.001 Sum_probs=80.9
Q ss_pred eecChHHHHHHHHHHHHHHHhCC--C-CEEEEeCCCccccccHHH-HH-------HHHHHHHhhccCccccCCeEEe-ee
Q 015124 183 MYNTDESIRAFAEASMNTAYQKK--W-PLYLSTKNTILKKYDGRF-KD-------IFQEVYEANWKSKFEAAGIWYE-HR 250 (413)
Q Consensus 183 ~~~Tr~~~eRiar~AFe~A~~r~--~-~Vt~v~KaNVl~~t~glf-~~-------~~~eva~~eYp~~~~~~~I~~~-~~ 250 (413)
..+|.+.+.+.++...+.-++-+ + |+-+. ==|==..-+|+| +| +.++..++ ++.+. ..
T Consensus 195 ~~It~~~I~~~i~~~~~~l~~fgi~~PrIaV~-GLNPHaGE~G~~G~EE~~iI~Pai~~l~~~---------gi~v~GP~ 264 (349)
T 4aty_A 195 ARLDQRHVERAARAAVQALQLMGIAHPVVGLM-GINPHAGEGGLFGRDDIDITEPVARKLRDD---------GMTVIGPQ 264 (349)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTC-CCCCEEEE-CSSGGGGTTTTTCSHHHHTHHHHHHHHHHC----------CCEEEEE
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcCCCCceEEE-ecCCCCCccccccchHHHHHHHHHHHHHHC---------CCeEeCCC
Confidence 56788888888887766665544 2 33322 122222233444 22 23333221 44443 66
Q ss_pred eHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCCCccC
Q 015124 251 LIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTN 329 (413)
Q Consensus 251 ~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~AN 329 (413)
--|++- .+.+| ++|+ || -|++-.-.--+++--+.|+--.--.----|-||||- ||||||+ ||
T Consensus 265 paDt~F-----~~~~~D~vla--MY----HDQgl~p~K~l~f~~~vnitlGLp~iRtS~dHGta~-----diagkg~-a~ 327 (349)
T 4aty_A 265 GADLLL-----TNPDIDVFVA--MY----HDQGHIPVKLRAGRHSAALSIGAGVLFSSVGHGSGF-----DIAGTLL-AD 327 (349)
T ss_dssp CHHHHT-----TCTTCSEEEE--SS----HHHHHHHHHHHHTTSEEEEEESSSSEEEECCSCCCT-----TSTTTTC-CC
T ss_pred chhhhh-----ccCCCCEEEE--cc----cccchHHHHhcccCCcEEEecCCCeeEeCCCCChhh-----hhccCCC-CC
Confidence 677754 24678 7766 44 677766666667777777632110233468999999 9999999 99
Q ss_pred hHHHHHHHHHHHH
Q 015124 330 SIASIFAWSRGLA 342 (413)
Q Consensus 330 P~A~IlS~ammL~ 342 (413)
|.+++-|.-|...
T Consensus 328 ~~s~~~Ai~~a~~ 340 (349)
T 4aty_A 328 PAPLLGAIRLVTT 340 (349)
T ss_dssp CHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999988876654
No 33
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=92.27 E-value=0.077 Score=52.48 Aligned_cols=136 Identities=13% Similarity=0.053 Sum_probs=87.5
Q ss_pred eecChHHHHHHHHHHHHHHHh-CC--CCEEEEeCCCccccccHHH-HH-------HHHHHHHhhccCccccCCeEE-eee
Q 015124 183 MYNTDESIRAFAEASMNTAYQ-KK--WPLYLSTKNTILKKYDGRF-KD-------IFQEVYEANWKSKFEAAGIWY-EHR 250 (413)
Q Consensus 183 ~~~Tr~~~eRiar~AFe~A~~-r~--~~Vt~v~KaNVl~~t~glf-~~-------~~~eva~~eYp~~~~~~~I~~-~~~ 250 (413)
..+|.+.+.+.++...+ -++ -+ ++-..|-==|==..-.|+| +| +.++..+ .+|.+ -..
T Consensus 180 ~~it~e~i~~~i~~~~~-L~~~fgi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~PAi~~~r~---------~Gi~~~GP~ 249 (330)
T 2hi1_A 180 DTLSTARVETVIGIADT-FLKRVGYVKPRIAVAGVNPHAGENGLFGDEETRILTPAITDARA---------KGMDVYGPC 249 (330)
T ss_dssp HHCCHHHHHHHHHHHHH-HHHHTTCSSCEEEEECSSGGGSSTTSCCHHHHHTHHHHHHHHHT---------TTCEEEEEE
T ss_pred HhcCHHHHHHHHHHHHH-HHHHcCCCCCCEEEEecCCCCCCCCCCCHhHHHHHHHHHHHHHH---------CCCceeCCC
Confidence 56899999999999998 443 33 2222332233323223443 22 2333222 16766 477
Q ss_pred eHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCCCccC
Q 015124 251 LIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTN 329 (413)
Q Consensus 251 ~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~AN 329 (413)
=-|++-.+-.+ ++| ++|| || -|++-.-.--+|+--+.|+--.--.----|-||||- ||||||+ ||
T Consensus 250 paDT~F~~~~~--~~~D~vla--MY----HDQGlip~K~l~F~~gVNvTlGLP~iRTSvDHGTAf-----DIAGkG~-A~ 315 (330)
T 2hi1_A 250 PPDTVFLQAYE--GQYDMVVA--MY----HDQGHIPLKLLGFYDGVNITAGLPFIRTSADHGTAF-----DIAWTGK-AK 315 (330)
T ss_dssp CHHHHHHHHHT--TSCSEEEE--SS----HHHHHHHHHHCC-CCSEEEEETSSSEEEEESCCCCT-----TTTTTTC-CC
T ss_pred Cchhhcccccc--ccCCEEEE--cc----cccccHhHhhcccCcceEEecCCCEEEecCCCCccc-----cccCCCC-CC
Confidence 78887655443 678 5554 33 588888888888888999742210234468999999 9999999 99
Q ss_pred hHHHHHHHHHHHH
Q 015124 330 SIASIFAWSRGLA 342 (413)
Q Consensus 330 P~A~IlS~ammL~ 342 (413)
|.+|+-|.-+..+
T Consensus 316 ~~Sl~~Ai~~A~~ 328 (330)
T 2hi1_A 316 SESMAVSIKLAMQ 328 (330)
T ss_dssp CHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999998866554
No 34
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=92.17 E-value=0.079 Score=52.53 Aligned_cols=137 Identities=14% Similarity=0.002 Sum_probs=88.6
Q ss_pred eecChHHHHHHHHHHHHHHHhC-C--C-CEEEEeCCCccccccHHH--------HHHHHHHHHhhccCccccCCeEE-ee
Q 015124 183 MYNTDESIRAFAEASMNTAYQK-K--W-PLYLSTKNTILKKYDGRF--------KDIFQEVYEANWKSKFEAAGIWY-EH 249 (413)
Q Consensus 183 ~~~Tr~~~eRiar~AFe~A~~r-~--~-~Vt~v~KaNVl~~t~glf--------~~~~~eva~~eYp~~~~~~~I~~-~~ 249 (413)
..+|.+.+.+.++.+.+..+++ + + ||-+.- =|=-..-.|+| +-+.++..++ +|.+ -.
T Consensus 178 ~~it~e~i~~~i~~~~~~l~~~fGi~~PrIAV~g-LNPHAGE~G~~G~EE~~iI~PAi~~lr~~---------Gi~~~GP 247 (334)
T 3lxy_A 178 GAITQASLHEVITILDNDLKTKFGITQPQIYVCG-LNPHAGEGGHMGHEEIDTIIPALNTLRQQ---------GINLIGP 247 (334)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTSCCSSCCEEEEC-SSGGGGGGGTTCSHHHHTHHHHHHHHHHT---------TCCEEEE
T ss_pred hhCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEe-cCCCCCCCCCCCchhHHHHHHHHHHHHHC---------CCceeCC
Confidence 5678999999999988877653 3 2 555542 11111122333 3344444332 5655 47
Q ss_pred eeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCCCcc
Q 015124 250 RLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETST 328 (413)
Q Consensus 250 ~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~A 328 (413)
+--|++-.+-.+ ++| ++||.+. |++-.-.--+++--+.|+--.--.----|-||||- ||||||+ |
T Consensus 248 ~paDt~F~~~~~--~~~D~vlaMYH------DQGlip~K~l~F~~gVNvTlGLP~iRTS~DHGTAf-----DIAGkG~-A 313 (334)
T 3lxy_A 248 LPADTLFQPKYL--QHADAVLAMYH------DQGLPVLKYQGFGRAVNITLGLPFIRTSVDHGTAL-----ELAATGT-A 313 (334)
T ss_dssp ECHHHHTSHHHH--TTCSEEEESSH------HHHHHHHHHHHTTCCEEEEESSSSCEEEESSCCCG-----GGTTTTC-S
T ss_pred CChHHhcChhhh--ccCCEEEEccc------chhhHhHHhcccCccEEEecCCCeeeecCCCCcch-----hhccCCC-C
Confidence 788887655444 678 8888654 57666666677777888632110223468999999 9999999 9
Q ss_pred ChHHHHHHHHHHHHH
Q 015124 329 NSIASIFAWSRGLAH 343 (413)
Q Consensus 329 NP~A~IlS~ammL~~ 343 (413)
||.+|+-|.-+..+.
T Consensus 314 ~~~S~~~Ai~~A~~~ 328 (334)
T 3lxy_A 314 DVGSFITALNLAIKM 328 (334)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHH
Confidence 999999888766654
No 35
>3tsn_A 4-hydroxythreonine-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: UNL; 2.63A {Campylobacter jejuni subsp}
Probab=90.69 E-value=0.13 Score=51.40 Aligned_cols=80 Identities=14% Similarity=0.024 Sum_probs=54.9
Q ss_pred eeeHHHHHHHHHhCCCce-EEEecCCchhhhhhhHhhhcCCcccccccccCCCCceEEEccccccccccccccccCCC-C
Q 015124 249 HRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGE-T 326 (413)
Q Consensus 249 ~~~VD~~a~~Lv~~P~~F-Viv~~NlfGDILSDlaa~l~GslGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~-i 326 (413)
..=-|++-.+-.+ ++| .+|| | --|++-.-.--+|+--+.|+--.--.----|-||||- |||||| +
T Consensus 281 P~paDT~F~~~~~--~~~D~vlA--M----YHDQGliplK~l~F~~gVNvTlGLP~IRTSvDHGTAf-----DIAGkG~~ 347 (367)
T 3tsn_A 281 PLVADTAFTKTGL--KNCNRLVA--M----YHDLALAPLKALYFDKSINVSLNLPIIRVSVDHGTAF-----DKAYKNAK 347 (367)
T ss_dssp CBCHHHHTSHHHH--HHCCEEEE--S----SHHHHHHHHHHHCTTTCEEEEESSSSCEEECCCCSCT-----TSCSSCCC
T ss_pred CcCchhhhccchh--cCCCEEEE--c----cccCcchhhhhcccCccEEEecCCCeeeecCCCCcch-----hhcCCCCc
Confidence 4455665433322 456 5555 3 3678877777788888888742110123468899999 999999 9
Q ss_pred ccChHHHHHHHHHHHH
Q 015124 327 STNSIASIFAWSRGLA 342 (413)
Q Consensus 327 ~ANP~A~IlS~ammL~ 342 (413)
|||.+|+-|.-+..+
T Consensus 348 -Ad~~Sl~~Ai~~A~~ 362 (367)
T 3tsn_A 348 -INTKSYFEAAKFAIN 362 (367)
T ss_dssp -CCCHHHHHHHHHHHH
T ss_pred -CChHHHHHHHHHHHH
Confidence 999999998876655
No 36
>3us8_A Isocitrate dehydrogenase [NADP]; PSI-biology, structural genomics; 2.25A {Sinorhizobium meliloti}
Probab=76.74 E-value=0.47 Score=48.45 Aligned_cols=30 Identities=10% Similarity=-0.082 Sum_probs=22.4
Q ss_pred cchhhhHHHHHhhhcccCCcceEEe--eeceeee
Q 015124 127 LLVINIEQLIQLFKDLANLNWCLVI--SLSVFDV 158 (413)
Q Consensus 127 ~~pl~~~r~~~~~~~~~~~iD~viv--nteG~Y~ 158 (413)
..++.+.| |+++|.|.++|+.++ +++++|+
T Consensus 148 ~~DivIvR--Enteg~Y~g~e~~~~~~~~~~l~~ 179 (427)
T 3us8_A 148 TKPIIVGR--HAFGDQYRATDFKFPGKGKLSIKF 179 (427)
T ss_dssp CSCEEEEE--ECSSGGGGCEEEEECSSEEEEEEE
T ss_pred CCCEEEEE--eCCCCccCCceeEEecCCcceeee
Confidence 45666678 888888888888877 5666666
No 37
>2uxq_A Isocitrate dehydrogenase native; psychrophilic, cold adaptation, thermal stability, oxidoreductase; HET: SO4 PEG; 1.75A {Desulfotalea psychrophila} PDB: 2uxr_A*
Probab=64.03 E-value=1.2 Score=45.00 Aligned_cols=36 Identities=6% Similarity=0.037 Sum_probs=26.9
Q ss_pred cCCCcchhhhHHHHHhhhcccCCcceEE--------e--eeceeeecC
Q 015124 123 IPGMLLVINIEQLIQLFKDLANLNWCLV--------I--SLSVFDVPE 160 (413)
Q Consensus 123 ~pg~~~pl~~~r~~~~~~~~~~~iD~vi--------v--nteG~Y~g~ 160 (413)
+|+++.|+.+.| |++++.|.++|+++ + |++|.|.+.
T Consensus 120 ~~~~~~divIvR--E~teg~Y~g~e~~~~~~g~~~~~~~~~~g~~~~~ 165 (402)
T 2uxq_A 120 VRSWQKPIVVGR--HAYGDFYKNAEIFAEAGGKLEIVVTDKNGKETRQ 165 (402)
T ss_dssp BTTCCSCCEEEE--ECSCGGGGCEEEEETTCEEEEEEEECTTSCEEEE
T ss_pred CCCCCCCeEEEe--ccCCCcccCcceeeccCCcceeeeeccCCccccc
Confidence 355667888889 99999999988886 2 567776544
No 38
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=47.61 E-value=10 Score=37.33 Aligned_cols=21 Identities=5% Similarity=0.026 Sum_probs=17.0
Q ss_pred ccccEEEECCC--CccHHHHHHH
Q 015124 8 VANPIVEMDGD--EMTRVFWKSI 28 (413)
Q Consensus 8 m~~~I~vi~GD--GIGpEv~~~~ 28 (413)
|+.+|++-.|| ||||||+-.+
T Consensus 1 m~~~iaIT~GDpaGIGpEii~ka 23 (328)
T 1yxo_A 1 MSLRFALTPGEPAGIGPDLCLLL 23 (328)
T ss_dssp CCCCEEEECCSTTSSHHHHHHHH
T ss_pred CCCEEEEcCCCCcchhHHHHHHH
Confidence 44569999999 9999987655
No 39
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=44.61 E-value=12 Score=36.69 Aligned_cols=20 Identities=10% Similarity=0.029 Sum_probs=16.5
Q ss_pred ccEEEECCC--CccHHHHHHHH
Q 015124 10 NPIVEMDGD--EMTRVFWKSIK 29 (413)
Q Consensus 10 ~~I~vi~GD--GIGpEv~~~~~ 29 (413)
+||++-.|| ||||||+-.++
T Consensus 7 ~~iaIT~GDpaGIGpEii~ka~ 28 (330)
T 2hi1_A 7 KTVAITMGDPAGIGPEIIVKAL 28 (330)
T ss_dssp CCEEEECCCTTTTHHHHHHHHH
T ss_pred CCEEEcCCCCcchhHHHHHHHH
Confidence 349999999 99999887553
No 40
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=39.56 E-value=14 Score=36.39 Aligned_cols=25 Identities=16% Similarity=0.194 Sum_probs=18.1
Q ss_pred CccceeccccEEEECCC--CccHHHHHHH
Q 015124 2 AFQKIKVANPIVEMDGD--EMTRVFWKSI 28 (413)
Q Consensus 2 ~~~~~~m~~~I~vi~GD--GIGpEv~~~~ 28 (413)
+|+-. +.+|++-.|| ||||||+-.+
T Consensus 3 ~m~~~--~~~iaiT~GDpaGIGpEiilka 29 (334)
T 3lxy_A 3 AMHNH--NNRLVITPGEPAGVGPDLAITL 29 (334)
T ss_dssp -CCCC--CSEEEEECCCTTSSHHHHHHHH
T ss_pred ccccC--CCEEEEeCCCCccchHHHHHHh
Confidence 45552 2579999999 9999987544
No 41
>1lwd_A Isocitrate dehydrogenase; tricarboxylic acid cycle, oxidoreductase, NADP; HET: ICT; 1.85A {Sus scrofa} SCOP: c.77.1.1 PDB: 1t0l_A* 1t09_A* 3mas_B* 3map_A* 3mar_A* 3mas_A* 3inm_A* 2cmj_A* 2cmv_A*
Probab=36.49 E-value=9.8 Score=38.52 Aligned_cols=18 Identities=0% Similarity=-0.416 Sum_probs=15.3
Q ss_pred CcceEEe--eeceeeecCCC
Q 015124 145 LNWCLVI--SLSVFDVPEGK 162 (413)
Q Consensus 145 ~iD~viv--nteG~Y~g~~~ 162 (413)
.+|++|+ ||||+|+|.+.
T Consensus 126 ~~divIvRe~t~g~Y~g~d~ 145 (413)
T 1lwd_A 126 TKPITIGRHAHGDQYKATDF 145 (413)
T ss_dssp CSCEEEEEECSSGGGGCEEE
T ss_pred CCceEEEecccCCccCCcee
Confidence 5999999 79999998643
No 42
>4aty_A Terephthalate 1,2-CIS-dihydrodiol dehydrogenase; oxidoreductase; 1.85A {Burkholderia xenovorans LB400}
Probab=35.14 E-value=23 Score=34.83 Aligned_cols=21 Identities=10% Similarity=-0.042 Sum_probs=17.4
Q ss_pred ccEEEECCC--CccHHHHHHHHH
Q 015124 10 NPIVEMDGD--EMTRVFWKSIKD 30 (413)
Q Consensus 10 ~~I~vi~GD--GIGpEv~~~~~~ 30 (413)
.+|++-.|| ||||||+-.++.
T Consensus 9 ~kIaIT~GDPaGIGpEIilKa~~ 31 (349)
T 4aty_A 9 MTVALAIGDPNGIGPEIAVKAAA 31 (349)
T ss_dssp CCEEEECCCTTSSHHHHHHHHHH
T ss_pred CeEEEECCCcchhHHHHHHHHHH
Confidence 479999999 999999866643
No 43
>3tsn_A 4-hydroxythreonine-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: UNL; 2.63A {Campylobacter jejuni subsp}
Probab=32.58 E-value=19 Score=35.86 Aligned_cols=19 Identities=11% Similarity=0.013 Sum_probs=16.2
Q ss_pred ccEEEECCC--CccHHHHHHH
Q 015124 10 NPIVEMDGD--EMTRVFWKSI 28 (413)
Q Consensus 10 ~~I~vi~GD--GIGpEv~~~~ 28 (413)
.+|++-.|| ||||||+-.+
T Consensus 5 ~~iaIT~GDpaGIGpEI~~ka 25 (367)
T 3tsn_A 5 KKLAISIGDINSIGLEILVRS 25 (367)
T ss_dssp CEEEEECCCTTTTHHHHHHHH
T ss_pred CEEEEeCCCCccchHHHHHHh
Confidence 468999999 9999997655
No 44
>1zor_A Isocitrate dehydrogenase; wild type enzyme, CIS-proline, thermostable, oxidoreductase; 2.24A {Thermotoga maritima}
Probab=27.72 E-value=15 Score=36.92 Aligned_cols=17 Identities=0% Similarity=-0.267 Sum_probs=14.7
Q ss_pred CcceEEe--eeceeeecCC
Q 015124 145 LNWCLVI--SLSVFDVPEG 161 (413)
Q Consensus 145 ~iD~viv--nteG~Y~g~~ 161 (413)
.+|++|+ ||||+|+|.+
T Consensus 125 ~~divi~Re~t~g~Y~g~d 143 (399)
T 1zor_A 125 KKPIIIGRHAYGDIYNAVE 143 (399)
T ss_dssp CSCCEEEECCSSGGGGCEE
T ss_pred CccceeeecccCCCcCCce
Confidence 4999999 7999999874
No 45
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=23.06 E-value=2.4e+02 Score=22.33 Aligned_cols=55 Identities=13% Similarity=-0.015 Sum_probs=40.2
Q ss_pred ccEEEECCCCccHHHHHHHHH-HHhcCCCceEEEEEecCchhhhccCCCCCHHHHHHHHhCCeeEEccc
Q 015124 10 NPIVEMDGDEMTRVFWKSIKD-KLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCAT 77 (413)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~-v~~~~~~~i~~~~~~~g~~~~~~~g~~lp~~~~~ai~~~~v~lkg~~ 77 (413)
++|.+.=|.|++--++-.-++ .+.+.|++++.+..+++. +.+ .+..+|++|.+|.
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~~~~---------~~~----~~~~~Dvil~~pq 59 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETL---------AGE----KGQNADVVLLGPQ 59 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEECSSS---------TTH----HHHHCSEEEECTT
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEecHHH---------HHh----hccCCCEEEEccc
Confidence 479999999999887666443 456679999888777753 222 2467899998874
No 46
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=21.37 E-value=62 Score=25.87 Aligned_cols=26 Identities=15% Similarity=0.042 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEeC
Q 015124 188 ESIRAFAEASMNTAYQKKWPLYLSTK 213 (413)
Q Consensus 188 ~~~eRiar~AFe~A~~r~~~Vt~v~K 213 (413)
+.+++.+++|.++|++.+-+|+++|=
T Consensus 16 ~~s~~al~~A~~la~~~~a~l~ll~v 41 (146)
T 3s3t_A 16 DAAQAAFTEAVNIAQRHQANLTALYV 41 (146)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 45889999999999988877776653
No 47
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=21.10 E-value=2.3e+02 Score=24.94 Aligned_cols=83 Identities=16% Similarity=0.245 Sum_probs=48.4
Q ss_pred ccccEEEECCC----CccHHHHHHHHHHHhcCCCceEEEEEecCc-hhhhc-cCCCCCHH---HHHHHHhCCeeEEcccC
Q 015124 8 VANPIVEMDGD----EMTRVFWKSIKDKLIFPFLELDIKYFDLGL-PNRDA-TDDKVTVE---SAEATLKYNVAIKCATI 78 (413)
Q Consensus 8 m~~~I~vi~GD----GIGpEv~~~~~~v~~~~~~~i~~~~~~~g~-~~~~~-~g~~lp~~---~~~ai~~~~v~lkg~~~ 78 (413)
|.++|++|-|- -.+.-+.+.+.+ +...+ ++++.+++.. ..++. .....|++ ..+.++++|+.+.+
T Consensus 1 M~k~I~vi~GS~R~~S~~~~la~~~~~-~~~~~--~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~aD~~ii~--- 74 (190)
T 3u7r_A 1 MVKTVAVMVGSLRKDSLNHKLMKVLQK-LAEGR--LEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEHSDAVLAI--- 74 (190)
T ss_dssp -CEEEEEEESCCSTTCHHHHHHHHHHH-HHTTT--EEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHTSSEEEEE---
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHH-hccCC--CEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHhCCcEEEe---
Confidence 66789999884 567777776665 33334 5555555542 11111 11124654 45788999999864
Q ss_pred CCcchhhHHHHhhccCCCcchhhhhhcCc
Q 015124 79 TPDEARVKEFVLKQMWKSPNGTIRNILNG 107 (413)
Q Consensus 79 ~p~~~~~~~~~~~~~~~s~~~~LRk~ldl 107 (413)
||.|. .|.-..|..-+|.
T Consensus 75 tPeYn-----------~s~pg~LKn~iDw 92 (190)
T 3u7r_A 75 TPEYN-----------RSYPGMIKNAIDW 92 (190)
T ss_dssp CCCBT-----------TBCCHHHHHHHHH
T ss_pred chhhc-----------ccCCHHHHHHHHH
Confidence 47654 2333667777773
No 48
>2af4_C Phosphate acetyltransferase; PTA dimer with one COA ligand bound PER monomer, acyltransferase; HET: COA; 2.15A {Methanosarcina thermophila} SCOP: c.77.1.5 PDB: 1qzt_A* 2af3_C*
Probab=20.53 E-value=2.8e+02 Score=26.56 Aligned_cols=95 Identities=12% Similarity=0.038 Sum_probs=60.2
Q ss_pred ecChHHHHHHHHHHHHHHHh-CCC--CEEEEeC---CCccccccHHHHHHHHHHHHhhccCccccCCeEEe-eeeHHHHH
Q 015124 184 YNTDESIRAFAEASMNTAYQ-KKW--PLYLSTK---NTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYE-HRLIDDMV 256 (413)
Q Consensus 184 ~~Tr~~~eRiar~AFe~A~~-r~~--~Vt~v~K---aNVl~~t~glf~~~~~eva~~eYp~~~~~~~I~~~-~~~VD~~a 256 (413)
..|.+...+|++.+-++|++ -+. ||-+..= -|.-......-++.++.+ ++.+| ++.++ ++-.|++.
T Consensus 177 ~pt~e~l~~ia~~~~~~~~~~~Gi~PrVAlLs~ge~g~~~~~~~~~v~~A~~ll-~~~~~------~~~v~Gpl~~D~a~ 249 (333)
T 2af4_C 177 MPSVEDVANIAVISAKTFELLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLA-QELAP------DIAIDGELQVDAAI 249 (333)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHCSCCEEEEECSCSTTSCCSHHHHHHHHHHHHH-HHHCT------TSEEEEEECHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCCeEEEEeCccCCCCCCCCcHHHHHHHHHH-hccCC------CcEEEecCcHHHhc
Confidence 44688889999999999998 453 5655542 221101123456666554 44689 88777 78889876
Q ss_pred HHHHh------CC--Cce-EEEecCCc-hhhhhhhHhhh
Q 015124 257 AYALK------SE--GGY-VWACKNYD-GDVQSDFLAQG 285 (413)
Q Consensus 257 ~~Lv~------~P--~~F-Viv~~Nlf-GDILSDlaa~l 285 (413)
..-+. +| +++ |+|++|+| |+|.-=+..-+
T Consensus 250 ~~~~~~~k~~~s~~~G~aDvlV~pd~d~GNI~~K~l~~~ 288 (333)
T 2af4_C 250 VPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQRL 288 (333)
T ss_dssp CHHHHHHHSTTCSSTTSCCEEECSSHHHHHHHHHHHHHT
T ss_pred CHHHHHhcCCCCccCCcCCEEEECCchHHHHHHHHHHHc
Confidence 44443 33 445 99999998 66666554433
No 49
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=20.20 E-value=69 Score=25.56 Aligned_cols=26 Identities=12% Similarity=0.014 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEeC
Q 015124 188 ESIRAFAEASMNTAYQKKWPLYLSTK 213 (413)
Q Consensus 188 ~~~eRiar~AFe~A~~r~~~Vt~v~K 213 (413)
+.+++.+++|.++|++.+-+|+++|=
T Consensus 13 ~~s~~al~~A~~la~~~~a~l~ll~v 38 (147)
T 3hgm_A 13 KGAVKALEKGVGLQQLTGAELYILCV 38 (147)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 46889999999999988888888774
Done!