Query 015129
Match_columns 413
No_of_seqs 195 out of 2289
Neff 10.7
Searched_HMMs 13730
Date Mon Mar 25 07:13:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015129.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015129hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2j0sa1 c.37.1.19 (A:22-243) P 100.0 3.5E-39 2.6E-43 271.1 23.2 207 37-243 14-220 (222)
2 d1veca_ c.37.1.19 (A:) DEAD bo 100.0 9E-38 6.5E-42 260.8 25.0 203 39-241 2-205 (206)
3 d2g9na1 c.37.1.19 (A:21-238) I 100.0 3.8E-38 2.8E-42 264.8 20.4 211 33-243 5-216 (218)
4 d1qdea_ c.37.1.19 (A:) Initiat 100.0 1.3E-37 9.2E-42 260.6 22.2 209 33-242 3-211 (212)
5 d1t6na_ c.37.1.19 (A:) Spliceo 100.0 5.9E-37 4.3E-41 256.0 23.7 203 40-242 1-206 (207)
6 d1hv8a1 c.37.1.19 (A:3-210) Pu 100.0 5.8E-36 4.2E-40 250.6 24.3 202 39-242 3-205 (208)
7 d1s2ma1 c.37.1.19 (A:46-251) P 100.0 5.8E-36 4.3E-40 250.5 22.6 204 40-243 1-204 (206)
8 d1wrba1 c.37.1.19 (A:164-401) 100.0 7.5E-36 5.5E-40 254.4 20.3 209 35-243 16-237 (238)
9 d1q0ua_ c.37.1.19 (A:) Probabl 100.0 4.9E-34 3.6E-38 240.1 19.8 204 40-243 1-208 (209)
10 d2bmfa2 c.37.1.14 (A:178-482) 100.0 1.3E-34 9.5E-39 259.2 15.1 272 74-385 6-299 (305)
11 d1fuka_ c.37.1.19 (A:) Initiat 100.0 5.9E-33 4.3E-37 221.4 18.8 161 253-413 1-161 (162)
12 d2j0sa2 c.37.1.19 (A:244-411) 100.0 6.4E-33 4.6E-37 222.4 18.4 167 247-413 2-168 (168)
13 d1s2ma2 c.37.1.19 (A:252-422) 100.0 2.8E-31 2E-35 214.4 19.4 164 248-412 2-165 (171)
14 d2rb4a1 c.37.1.19 (A:307-474) 100.0 4.3E-30 3.1E-34 206.0 18.6 160 249-408 2-167 (168)
15 d1t5ia_ c.37.1.19 (A:) Spliceo 100.0 1.7E-29 1.2E-33 202.7 18.6 156 253-409 2-158 (168)
16 d1hv8a2 c.37.1.19 (A:211-365) 100.0 2.4E-29 1.7E-33 199.6 17.8 153 251-405 2-154 (155)
17 d1oywa3 c.37.1.19 (A:207-406) 100.0 3.6E-27 2.7E-31 193.7 19.4 143 249-394 3-145 (200)
18 d2p6ra3 c.37.1.19 (A:1-202) He 99.9 1.3E-27 9.1E-32 199.4 12.2 183 47-238 10-195 (202)
19 d1oywa2 c.37.1.19 (A:1-206) Re 99.9 2.1E-27 1.5E-31 198.9 7.7 188 41-239 3-202 (206)
20 d1wp9a1 c.37.1.19 (A:1-200) pu 99.9 2.1E-25 1.5E-29 186.0 17.8 164 62-229 9-172 (200)
21 d1gkub1 c.37.1.16 (B:1-250) He 99.9 1.9E-26 1.4E-30 197.3 9.0 177 41-227 23-218 (237)
22 d1c4oa2 c.37.1.19 (A:410-583) 99.9 2.2E-24 1.6E-28 170.1 18.5 114 278-392 30-148 (174)
23 d1t5la2 c.37.1.19 (A:415-595) 99.9 1.4E-23 1E-27 168.5 17.3 108 278-386 30-142 (181)
24 d2eyqa3 c.37.1.19 (A:546-778) 99.9 2.7E-20 2E-24 154.3 20.3 173 46-232 39-222 (233)
25 d1gm5a3 c.37.1.19 (A:286-549) 99.9 5.7E-21 4.2E-25 161.5 15.3 169 49-231 71-249 (264)
26 d1jr6a_ c.37.1.14 (A:) HCV hel 99.9 8.4E-22 6.1E-26 150.7 9.1 104 274-387 30-137 (138)
27 d1rifa_ c.37.1.23 (A:) DNA hel 99.8 5.3E-22 3.9E-26 172.4 8.3 153 62-226 113-265 (282)
28 d2fz4a1 c.37.1.19 (A:24-229) D 99.8 1.6E-20 1.1E-24 156.0 12.6 137 62-224 70-206 (206)
29 d1wp9a2 c.37.1.19 (A:201-486) 99.8 2.3E-20 1.7E-24 163.7 12.9 118 271-389 153-278 (286)
30 d2p6ra4 c.37.1.19 (A:203-403) 99.8 9.3E-20 6.8E-24 149.7 12.3 122 266-389 29-189 (201)
31 d2fwra1 c.37.1.19 (A:257-456) 99.8 2E-20 1.5E-24 154.8 8.2 117 264-385 78-197 (200)
32 d1yksa1 c.37.1.14 (A:185-324) 99.8 1.3E-19 9.4E-24 141.3 7.0 136 74-224 4-140 (140)
33 d1gm5a4 c.37.1.19 (A:550-755) 99.8 2.6E-19 1.9E-23 145.6 7.0 131 266-396 14-158 (206)
34 d2eyqa5 c.37.1.19 (A:779-989) 99.7 3.3E-17 2.4E-21 131.6 15.3 109 278-386 30-141 (211)
35 d1a1va1 c.37.1.14 (A:190-325) 99.7 4.9E-18 3.6E-22 131.2 9.3 127 77-223 8-136 (136)
36 d1a1va2 c.37.1.14 (A:326-624) 99.7 1.4E-18 1E-22 146.0 4.9 107 278-385 35-154 (299)
37 d1gkub2 c.37.1.16 (B:251-498) 99.7 6E-20 4.4E-24 157.1 -4.5 120 264-394 11-135 (248)
38 d1z3ix1 c.37.1.19 (X:390-735) 99.6 3.8E-15 2.8E-19 132.0 16.4 136 264-399 100-245 (346)
39 d1z3ix2 c.37.1.19 (X:92-389) R 99.6 5E-15 3.6E-19 129.9 16.3 157 62-225 55-232 (298)
40 d1z5za1 c.37.1.19 (A:663-906) 99.6 6.4E-15 4.6E-19 125.2 14.4 135 264-398 68-211 (244)
41 d1z63a1 c.37.1.19 (A:432-661) 99.5 8.9E-15 6.5E-19 123.3 8.1 150 62-226 12-165 (230)
42 d1yksa2 c.37.1.14 (A:325-623) 99.4 1.8E-13 1.3E-17 117.5 10.6 101 279-384 36-155 (299)
43 d1tf5a4 c.37.1.19 (A:396-570) 99.4 4.4E-12 3.2E-16 98.0 13.0 123 262-387 15-148 (175)
44 d1tf5a3 c.37.1.19 (A:1-226,A:3 99.2 2.8E-10 2E-14 93.6 15.4 166 59-235 78-264 (273)
45 d1nkta3 c.37.1.19 (A:-15-225,A 99.1 4.7E-10 3.5E-14 92.6 14.4 165 59-234 95-278 (288)
46 d1nkta4 c.37.1.19 (A:397-615) 98.9 2.4E-08 1.7E-12 78.2 14.1 124 262-388 15-193 (219)
47 d1w36d1 c.37.1.19 (D:2-360) Ex 98.4 3.1E-07 2.2E-11 80.9 9.0 145 60-222 146-297 (359)
48 d1uaaa1 c.37.1.19 (A:2-307) DE 98.1 1.7E-06 1.3E-10 74.8 7.5 69 62-132 1-70 (306)
49 d1pjra1 c.37.1.19 (A:1-318) DE 97.9 1.5E-05 1.1E-09 69.1 7.9 69 62-132 11-80 (318)
50 d1a5ta2 c.37.1.20 (A:1-207) de 97.8 1.3E-05 9.6E-10 64.7 6.8 39 62-100 2-47 (207)
51 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 97.4 0.00012 9E-09 69.5 8.1 71 61-133 10-81 (623)
52 d1njfa_ c.37.1.20 (A:) delta p 97.3 0.0012 8.9E-08 54.0 11.7 38 182-220 115-152 (239)
53 d1l8qa2 c.37.1.20 (A:77-289) C 97.3 0.00047 3.4E-08 55.4 8.5 42 183-224 98-141 (213)
54 d2gnoa2 c.37.1.20 (A:11-208) g 97.2 0.00022 1.6E-08 56.6 6.3 116 67-224 2-120 (198)
55 d2b8ta1 c.37.1.24 (A:11-149) T 97.1 0.00045 3.3E-08 51.1 6.4 88 80-195 5-92 (139)
56 d2qy9a2 c.37.1.10 (A:285-495) 97.1 0.00029 2.1E-08 56.0 5.7 131 80-234 12-150 (211)
57 d1ls1a2 c.37.1.10 (A:89-295) G 97.1 0.00082 6E-08 53.4 8.3 132 78-234 11-145 (207)
58 d1gm5a3 c.37.1.19 (A:286-549) 97.0 0.0018 1.3E-07 53.3 10.0 88 278-367 131-223 (264)
59 d1sxje2 c.37.1.20 (E:4-255) Re 97.0 0.00042 3.1E-08 57.4 5.6 41 182-223 131-171 (252)
60 d2eyqa3 c.37.1.19 (A:546-778) 96.9 0.007 5.1E-07 48.6 12.0 101 257-357 80-187 (233)
61 d1xbta1 c.37.1.24 (A:18-150) T 96.8 0.0011 7.7E-08 48.6 6.0 39 78-119 3-41 (133)
62 d1ixza_ c.37.1.20 (A:) AAA dom 96.7 0.0036 2.6E-07 51.2 9.5 54 38-94 4-59 (247)
63 d1sxjb2 c.37.1.20 (B:7-230) Re 96.7 0.00067 4.9E-08 55.0 4.8 43 181-224 100-142 (224)
64 d1j8yf2 c.37.1.10 (F:87-297) G 96.7 0.0008 5.8E-08 53.5 5.0 132 79-233 14-148 (211)
65 d1iqpa2 c.37.1.20 (A:2-232) Re 96.6 0.0024 1.7E-07 51.8 7.7 41 181-222 108-148 (231)
66 d1xx6a1 c.37.1.24 (A:2-142) Th 96.6 0.0015 1.1E-07 48.2 5.7 40 77-119 7-46 (141)
67 d1sxjc2 c.37.1.20 (C:12-238) R 96.4 0.0032 2.4E-07 50.8 7.2 42 178-220 95-136 (227)
68 d1t5la1 c.37.1.19 (A:2-414) Nu 96.4 0.00099 7.2E-08 58.8 4.0 66 62-133 11-81 (413)
69 d1vmaa2 c.37.1.10 (A:82-294) G 96.4 0.016 1.2E-06 45.8 10.6 59 79-141 13-71 (213)
70 d1sxjd2 c.37.1.20 (D:26-262) R 96.4 0.0016 1.2E-07 53.0 5.0 42 182-224 108-149 (237)
71 d1okkd2 c.37.1.10 (D:97-303) G 96.3 0.006 4.4E-07 48.1 8.0 24 77-100 6-29 (207)
72 d2eyqa5 c.37.1.19 (A:779-989) 96.3 0.0033 2.4E-07 49.4 6.1 101 108-220 31-138 (211)
73 d1lv7a_ c.37.1.20 (A:) AAA dom 96.3 0.0057 4.2E-07 50.2 8.0 55 37-94 6-62 (256)
74 d1g6oa_ c.37.1.11 (A:) Hexamer 95.7 0.0061 4.5E-07 51.9 5.6 52 65-120 153-205 (323)
75 d1jbka_ c.37.1.20 (A:) ClpB, A 95.4 0.029 2.1E-06 43.4 8.0 114 77-192 43-186 (195)
76 d1c4oa2 c.37.1.19 (A:410-583) 95.4 0.033 2.4E-06 42.2 8.2 76 108-193 31-110 (174)
77 d1c4oa1 c.37.1.19 (A:2-409) Nu 94.5 0.016 1.2E-06 50.9 4.8 66 62-133 8-78 (408)
78 d1w36b1 c.37.1.19 (B:1-485) Ex 94.4 0.03 2.2E-06 50.4 6.8 56 77-132 16-80 (485)
79 d1t5la2 c.37.1.19 (A:415-595) 94.4 0.13 9.7E-06 39.2 9.4 75 109-193 32-110 (181)
80 d1p9ra_ c.37.1.11 (A:) Extrace 94.4 0.021 1.5E-06 50.2 5.3 39 64-103 143-183 (401)
81 d2i3ba1 c.37.1.11 (A:1-189) Ca 94.4 0.012 9.1E-07 45.2 3.4 27 78-105 2-28 (189)
82 d1fuka_ c.37.1.19 (A:) Initiat 94.2 0.13 9.2E-06 38.5 8.8 74 108-191 27-104 (162)
83 d1um8a_ c.37.1.20 (A:) ClpX {H 94.0 0.021 1.6E-06 49.3 4.3 18 77-94 68-85 (364)
84 d1g5ta_ c.37.1.11 (A:) ATP:cor 93.7 0.11 7.7E-06 38.5 7.3 133 80-229 5-143 (157)
85 d1ofha_ c.37.1.20 (A:) HslU {H 93.6 0.02 1.4E-06 48.4 3.4 18 77-94 49-66 (309)
86 d1fnna2 c.37.1.20 (A:1-276) CD 93.3 0.053 3.9E-06 44.4 5.7 25 78-103 44-68 (276)
87 d1s2ma2 c.37.1.19 (A:252-422) 93.3 0.21 1.5E-05 37.7 8.6 75 108-192 32-110 (171)
88 d1g41a_ c.37.1.20 (A:) HslU {H 93.2 0.017 1.2E-06 51.4 2.4 18 77-94 49-66 (443)
89 d1e9ra_ c.37.1.11 (A:) Bacteri 93.0 0.04 2.9E-06 48.9 4.6 44 75-121 48-91 (433)
90 d1oywa3 c.37.1.19 (A:207-406) 92.7 0.25 1.8E-05 38.3 8.5 71 108-188 30-104 (200)
91 d1kaga_ c.37.1.2 (A:) Shikimat 92.5 0.036 2.6E-06 41.5 3.1 19 77-95 2-20 (169)
92 d2j0sa2 c.37.1.19 (A:244-411) 92.3 0.27 2E-05 36.8 8.1 96 81-191 12-111 (168)
93 d1zp6a1 c.37.1.25 (A:6-181) Hy 92.2 0.031 2.3E-06 42.5 2.4 19 76-94 3-21 (176)
94 d1tf7a2 c.37.1.11 (A:256-497) 92.2 0.048 3.5E-06 43.9 3.7 38 76-116 25-62 (242)
95 d1t5ia_ c.37.1.19 (A:) Spliceo 92.0 0.24 1.7E-05 37.2 7.4 73 109-191 28-104 (168)
96 d2rb4a1 c.37.1.19 (A:307-474) 92.0 0.34 2.5E-05 36.3 8.2 75 107-191 31-109 (168)
97 d1in4a2 c.37.1.20 (A:17-254) H 91.7 0.047 3.4E-06 44.0 3.1 17 78-94 36-52 (238)
98 d1r6bx2 c.37.1.20 (X:169-436) 91.7 0.11 8.1E-06 42.4 5.3 116 77-193 39-183 (268)
99 d1y63a_ c.37.1.1 (A:) Probable 91.6 0.039 2.8E-06 41.8 2.3 18 77-94 5-22 (174)
100 d1ly1a_ c.37.1.1 (A:) Polynucl 91.5 0.037 2.7E-06 40.9 2.0 15 80-94 5-19 (152)
101 d1ixsb2 c.37.1.20 (B:4-242) Ho 91.4 0.048 3.5E-06 43.9 2.9 17 78-94 36-52 (239)
102 d1rkba_ c.37.1.1 (A:) Adenylat 91.2 0.053 3.8E-06 40.9 2.8 18 78-95 5-22 (173)
103 d1qvra2 c.37.1.20 (A:149-535) 91.1 0.55 4E-05 40.4 9.6 115 77-193 43-186 (387)
104 d1e32a2 c.37.1.20 (A:201-458) 91.0 0.03 2.2E-06 45.9 1.2 18 77-94 38-55 (258)
105 d1hv8a1 c.37.1.19 (A:3-210) Pu 91.0 1.8 0.00013 33.3 12.0 74 278-356 71-154 (208)
106 d2bdta1 c.37.1.25 (A:1-176) Hy 90.9 0.045 3.3E-06 41.3 2.0 16 79-94 4-19 (176)
107 d1hv8a2 c.37.1.19 (A:211-365) 90.8 0.51 3.7E-05 34.7 8.0 72 109-190 29-104 (155)
108 d1m8pa3 c.37.1.15 (A:391-573) 90.6 0.048 3.5E-06 41.5 2.0 20 75-94 4-23 (183)
109 d1lw7a2 c.37.1.1 (A:220-411) T 90.5 0.039 2.8E-06 42.3 1.4 18 77-94 7-24 (192)
110 d1szpa2 c.37.1.11 (A:145-395) 90.2 0.08 5.8E-06 42.6 3.2 41 76-116 33-76 (251)
111 d1gvnb_ c.37.1.21 (B:) Plasmid 90.1 0.07 5.1E-06 43.7 2.7 17 78-94 33-49 (273)
112 d1cr2a_ c.37.1.11 (A:) Gene 4 89.9 0.13 9.8E-06 42.2 4.4 42 74-117 32-73 (277)
113 d1d2na_ c.37.1.20 (A:) Hexamer 89.3 0.063 4.6E-06 43.5 1.8 17 78-94 41-57 (246)
114 d1ak2a1 c.37.1.1 (A:14-146,A:1 89.2 0.11 7.7E-06 40.1 3.0 20 77-96 3-22 (190)
115 d1viaa_ c.37.1.2 (A:) Shikimat 89.2 0.1 7.5E-06 39.0 2.9 18 78-95 1-18 (161)
116 d1sxja2 c.37.1.20 (A:295-547) 89.1 0.11 7.9E-06 42.0 3.2 53 41-95 12-70 (253)
117 d1n0wa_ c.37.1.11 (A:) DNA rep 88.9 0.11 8.4E-06 40.7 3.1 28 76-103 22-49 (242)
118 d1tf7a1 c.37.1.11 (A:14-255) C 88.8 0.12 8.8E-06 41.1 3.2 39 76-116 25-63 (242)
119 d1qhxa_ c.37.1.3 (A:) Chloramp 88.7 0.092 6.7E-06 39.6 2.3 18 77-94 3-20 (178)
120 d1g8pa_ c.37.1.20 (A:) ATPase 88.5 0.079 5.7E-06 45.1 1.9 19 76-94 27-45 (333)
121 d1zina1 c.37.1.1 (A:1-125,A:16 88.3 0.12 8.5E-06 39.4 2.7 17 79-95 2-18 (182)
122 d1knqa_ c.37.1.17 (A:) Glucona 88.1 0.093 6.8E-06 39.4 1.9 18 78-95 7-24 (171)
123 d2cdna1 c.37.1.1 (A:1-181) Ade 88.0 0.098 7.1E-06 39.9 2.0 18 79-96 2-19 (181)
124 d1yksa2 c.37.1.14 (A:325-623) 88.0 0.3 2.2E-05 40.4 5.1 53 109-165 37-89 (299)
125 d1s3ga1 c.37.1.1 (A:1-125,A:16 87.7 0.14 9.9E-06 39.1 2.7 18 79-96 2-19 (182)
126 d1jr6a_ c.37.1.14 (A:) HCV hel 87.6 0.31 2.3E-05 35.1 4.4 65 109-187 36-100 (138)
127 d1e4va1 c.37.1.1 (A:1-121,A:15 87.5 0.098 7.1E-06 39.8 1.7 17 79-95 2-18 (179)
128 d2eyqa2 c.37.1.19 (A:349-465) 87.4 0.71 5.2E-05 32.0 6.2 75 267-354 23-97 (117)
129 d1e6ca_ c.37.1.2 (A:) Shikimat 87.2 0.18 1.3E-05 37.9 3.1 19 78-96 3-21 (170)
130 d3adka_ c.37.1.1 (A:) Adenylat 87.2 0.17 1.2E-05 39.1 2.9 22 74-95 5-26 (194)
131 d2ak3a1 c.37.1.1 (A:0-124,A:16 86.9 0.19 1.3E-05 38.7 3.1 19 78-96 7-25 (189)
132 d1yj5a2 c.37.1.1 (A:351-522) 5 86.9 0.13 9.2E-06 39.0 2.0 17 78-94 15-31 (172)
133 d1x6va3 c.37.1.4 (A:34-228) Ad 86.9 0.068 5E-06 41.2 0.4 19 77-95 19-37 (195)
134 d1zaka1 c.37.1.1 (A:3-127,A:15 86.8 0.15 1.1E-05 39.1 2.5 18 78-95 4-21 (189)
135 d1khta_ c.37.1.1 (A:) Adenylat 86.6 0.14 1E-05 38.9 2.3 17 78-94 2-18 (190)
136 d1pzna2 c.37.1.11 (A:96-349) D 86.6 0.15 1.1E-05 41.1 2.4 27 76-102 35-61 (254)
137 d1v5wa_ c.37.1.11 (A:) Meiotic 86.4 0.19 1.4E-05 40.4 3.1 50 76-125 36-88 (258)
138 d1ye8a1 c.37.1.11 (A:1-178) Hy 86.3 0.18 1.3E-05 38.0 2.7 23 79-102 2-24 (178)
139 d1u94a1 c.37.1.11 (A:6-268) Re 86.3 0.28 2E-05 39.8 4.0 39 76-117 53-91 (263)
140 d2j0sa1 c.37.1.19 (A:22-243) P 86.2 0.73 5.3E-05 36.2 6.4 73 279-355 85-167 (222)
141 d1akya1 c.37.1.1 (A:3-130,A:16 85.7 0.2 1.4E-05 38.1 2.7 17 79-95 4-20 (180)
142 d1ny5a2 c.37.1.20 (A:138-384) 85.7 0.81 5.9E-05 36.6 6.5 21 74-94 20-40 (247)
143 d1ukza_ c.37.1.1 (A:) Uridylat 85.7 0.23 1.6E-05 38.3 3.0 18 79-96 10-27 (196)
144 d1np6a_ c.37.1.10 (A:) Molybdo 85.6 0.33 2.4E-05 36.0 3.9 15 80-94 5-19 (170)
145 d2i1qa2 c.37.1.11 (A:65-322) D 85.6 0.18 1.3E-05 40.4 2.4 28 76-103 33-60 (258)
146 d1qf9a_ c.37.1.1 (A:) UMP/CMP 85.2 0.2 1.4E-05 38.5 2.4 18 78-95 7-24 (194)
147 d1svma_ c.37.1.20 (A:) Papillo 85.0 0.3 2.2E-05 41.7 3.7 19 77-95 154-172 (362)
148 d1teva_ c.37.1.1 (A:) UMP/CMP 85.0 0.23 1.6E-05 38.2 2.7 17 79-95 3-19 (194)
149 d1byia_ c.37.1.10 (A:) Dethiob 84.5 0.31 2.3E-05 38.1 3.4 34 78-114 2-36 (224)
150 d1znwa1 c.37.1.1 (A:20-201) Gu 84.4 0.22 1.6E-05 37.9 2.3 18 77-94 2-19 (182)
151 d2iyva1 c.37.1.2 (A:2-166) Shi 84.2 0.31 2.3E-05 36.3 3.1 18 79-96 3-20 (165)
152 d1w5sa2 c.37.1.20 (A:7-293) CD 84.1 0.17 1.2E-05 41.5 1.6 15 80-94 49-63 (287)
153 d1nlfa_ c.37.1.11 (A:) Hexamer 83.7 0.39 2.8E-05 39.1 3.8 62 70-133 22-91 (274)
154 d1gkya_ c.37.1.1 (A:) Guanylat 83.5 0.24 1.8E-05 37.8 2.2 17 78-94 2-18 (186)
155 d2pmka1 c.37.1.12 (A:467-707) 83.3 0.41 3E-05 38.2 3.6 21 74-94 26-46 (241)
156 d1s96a_ c.37.1.1 (A:) Guanylat 83.1 0.27 2E-05 38.3 2.4 19 76-94 1-19 (205)
157 d1r7ra3 c.37.1.20 (A:471-735) 82.9 0.35 2.5E-05 39.4 3.1 18 77-94 41-58 (265)
158 d1jj7a_ c.37.1.12 (A:) Peptide 82.3 0.48 3.5E-05 38.0 3.7 21 74-94 37-57 (251)
159 d1bg2a_ c.37.1.9 (A:) Kinesin 81.7 0.4 2.9E-05 40.3 3.1 24 71-94 68-93 (323)
160 d1lvga_ c.37.1.1 (A:) Guanylat 81.5 0.32 2.3E-05 37.3 2.2 16 79-94 2-17 (190)
161 d1yrba1 c.37.1.10 (A:1-244) AT 81.0 0.61 4.5E-05 36.9 3.9 22 80-102 3-24 (244)
162 d1t6na_ c.37.1.19 (A:) Spliceo 80.9 1.7 0.00012 33.5 6.4 74 280-356 70-154 (207)
163 d1mo6a1 c.37.1.11 (A:1-269) Re 80.8 0.75 5.4E-05 37.3 4.3 43 75-120 58-100 (269)
164 d1gkub1 c.37.1.16 (B:1-250) He 80.1 2.1 0.00016 33.6 7.0 96 258-355 63-170 (237)
165 d1l2ta_ c.37.1.12 (A:) MJ0796 80.0 0.66 4.8E-05 36.6 3.7 28 74-103 28-55 (230)
166 d1nksa_ c.37.1.1 (A:) Adenylat 80.0 0.32 2.3E-05 36.9 1.7 15 80-94 4-18 (194)
167 d1mv5a_ c.37.1.12 (A:) Multidr 79.8 0.61 4.5E-05 37.2 3.5 20 75-94 26-45 (242)
168 d1rz3a_ c.37.1.6 (A:) Hypothet 79.7 0.33 2.4E-05 37.1 1.7 14 81-94 26-39 (198)
169 d1wp9a2 c.37.1.19 (A:201-486) 79.5 2.8 0.00021 33.9 7.8 77 106-192 159-247 (286)
170 d1goja_ c.37.1.9 (A:) Kinesin 79.3 0.5 3.7E-05 40.2 3.0 24 71-94 72-97 (354)
171 d1v8ka_ c.37.1.9 (A:) Kinesin 78.9 0.52 3.8E-05 40.2 2.9 25 71-95 106-132 (362)
172 d1ckea_ c.37.1.1 (A:) CMP kina 78.4 0.53 3.9E-05 36.7 2.7 17 80-96 6-22 (225)
173 d1r6bx3 c.37.1.20 (X:437-751) 78.4 0.52 3.8E-05 39.4 2.7 17 79-95 54-70 (315)
174 d1kgda_ c.37.1.1 (A:) Guanylat 78.1 0.49 3.6E-05 35.7 2.3 17 78-94 4-20 (178)
175 d1xp8a1 c.37.1.11 (A:15-282) R 78.1 0.8 5.8E-05 37.1 3.7 41 77-120 57-97 (268)
176 d1bifa1 c.37.1.7 (A:37-249) 6- 77.9 0.44 3.2E-05 36.8 2.0 16 80-95 5-20 (213)
177 d1sdma_ c.37.1.9 (A:) Kinesin 77.8 0.52 3.8E-05 40.3 2.6 25 70-94 66-92 (364)
178 d1knxa2 c.91.1.2 (A:133-309) H 77.7 0.54 3.9E-05 35.3 2.3 20 76-95 14-33 (177)
179 d1xpua3 c.37.1.11 (A:129-417) 77.4 1.1 7.8E-05 36.6 4.2 31 69-99 32-65 (289)
180 d2zfia1 c.37.1.9 (A:4-352) Kin 77.3 0.63 4.6E-05 39.5 3.0 24 71-94 79-104 (349)
181 d1uj2a_ c.37.1.6 (A:) Uridine- 77.2 0.48 3.5E-05 36.8 2.0 15 80-94 5-19 (213)
182 d1w44a_ c.37.1.11 (A:) NTPase 77.1 0.46 3.3E-05 39.6 1.9 16 79-94 125-140 (321)
183 d1x88a1 c.37.1.9 (A:18-362) Ki 76.6 0.62 4.6E-05 39.4 2.7 25 70-94 72-98 (345)
184 d1veca_ c.37.1.19 (A:) DEAD bo 76.5 4.5 0.00033 30.8 7.8 74 278-355 70-154 (206)
185 d2hyda1 c.37.1.12 (A:324-578) 76.5 0.53 3.8E-05 37.9 2.1 21 74-94 41-61 (255)
186 d1kkma_ c.91.1.2 (A:) HPr kina 76.5 0.69 5E-05 34.7 2.6 20 76-95 13-32 (176)
187 d1q3ta_ c.37.1.1 (A:) CMP kina 76.4 0.73 5.3E-05 35.9 3.0 17 80-96 6-22 (223)
188 d2ncda_ c.37.1.9 (A:) Kinesin 76.3 0.64 4.7E-05 39.7 2.7 25 70-94 116-142 (368)
189 d1gm5a4 c.37.1.19 (A:550-755) 76.2 0.2 1.5E-05 38.9 -0.5 81 108-194 29-120 (206)
190 d1sgwa_ c.37.1.12 (A:) Putativ 76.0 0.57 4.1E-05 36.1 2.1 20 75-94 25-44 (200)
191 d1wrba1 c.37.1.19 (A:164-401) 75.8 14 0.00099 28.7 10.7 72 280-355 99-180 (238)
192 d1ko7a2 c.91.1.2 (A:130-298) H 75.2 0.71 5.2E-05 34.4 2.4 20 76-95 14-33 (169)
193 d1qdea_ c.37.1.19 (A:) Initiat 75.2 1.6 0.00012 33.7 4.7 74 278-356 77-160 (212)
194 d2awna2 c.37.1.12 (A:4-235) Ma 75.1 1.2 8.8E-05 35.0 3.8 20 74-93 23-42 (232)
195 d1xjca_ c.37.1.10 (A:) Molybdo 74.7 1.3 9.7E-05 32.5 3.9 15 80-94 4-18 (165)
196 d1f9va_ c.37.1.9 (A:) Kinesin 74.7 0.89 6.5E-05 38.4 3.2 26 70-95 74-101 (342)
197 d1odfa_ c.37.1.6 (A:) Hypothet 74.5 0.91 6.7E-05 37.0 3.1 14 81-94 31-44 (286)
198 d2a5yb3 c.37.1.20 (B:109-385) 74.3 15 0.0011 29.1 11.0 18 78-95 45-62 (277)
199 d1s2ma1 c.37.1.19 (A:46-251) P 74.1 7.5 0.00055 29.4 8.5 75 278-356 68-152 (206)
200 d1wp9a1 c.37.1.19 (A:1-200) pu 73.5 8.9 0.00065 28.6 8.9 95 257-356 27-134 (200)
201 d1qvra3 c.37.1.20 (A:536-850) 73.5 0.79 5.8E-05 38.2 2.5 17 79-95 55-71 (315)
202 d3b60a1 c.37.1.12 (A:329-581) 73.4 0.66 4.8E-05 37.2 1.9 21 74-94 38-58 (253)
203 d2p6ra4 c.37.1.19 (A:203-403) 72.3 6.2 0.00045 29.9 7.5 74 110-189 42-145 (201)
204 d1nija1 c.37.1.10 (A:2-223) Hy 72.2 1.2 8.8E-05 34.8 3.2 32 80-116 6-37 (222)
205 d2vp4a1 c.37.1.1 (A:12-208) De 72.0 1 7.4E-05 34.2 2.7 16 79-94 11-26 (197)
206 d1r0wa_ c.37.1.12 (A:) Cystic 71.8 0.91 6.7E-05 37.0 2.5 20 75-94 60-79 (281)
207 d1v43a3 c.37.1.12 (A:7-245) Hy 71.2 1.7 0.00012 34.3 3.8 21 74-94 29-49 (239)
208 d2jdid3 c.37.1.11 (D:82-357) C 71.2 5.1 0.00037 32.1 6.9 26 74-99 65-90 (276)
209 d1g2912 c.37.1.12 (1:1-240) Ma 70.5 0.89 6.5E-05 36.0 2.0 20 75-94 27-46 (240)
210 d3dhwc1 c.37.1.12 (C:1-240) Me 70.1 0.84 6.1E-05 36.2 1.8 20 74-93 28-47 (240)
211 d1sq5a_ c.37.1.6 (A:) Pantothe 69.9 1.8 0.00013 35.7 3.9 15 80-94 83-97 (308)
212 d4tmka_ c.37.1.1 (A:) Thymidyl 69.8 3.1 0.00022 31.8 5.2 20 76-95 1-20 (210)
213 d2fnaa2 c.37.1.20 (A:1-283) Ar 69.4 1.3 9.3E-05 35.6 2.9 18 77-94 29-46 (283)
214 d3d31a2 c.37.1.12 (A:1-229) Su 69.2 1.4 9.9E-05 34.6 2.8 21 74-94 23-43 (229)
215 d1oxxk2 c.37.1.12 (K:1-242) Gl 68.6 1.1 8.3E-05 35.4 2.3 20 75-94 29-48 (242)
216 d1vi2a1 c.2.1.7 (A:107-288) Pu 68.6 6.1 0.00044 29.3 6.6 83 76-168 17-101 (182)
217 d1nn5a_ c.37.1.1 (A:) Thymidyl 68.3 2.2 0.00016 32.8 4.0 20 76-95 2-21 (209)
218 d1m7ga_ c.37.1.4 (A:) Adenosin 68.1 1.1 7.8E-05 34.7 2.0 18 77-94 24-41 (208)
219 d1oywa2 c.37.1.19 (A:1-206) Re 67.4 21 0.0016 26.5 10.3 81 256-337 43-123 (206)
220 d1htwa_ c.37.1.18 (A:) Hypothe 66.8 1.8 0.00013 31.7 2.9 39 78-122 34-72 (158)
221 d1uf9a_ c.37.1.1 (A:) Dephosph 66.6 1.1 7.8E-05 34.0 1.7 14 81-94 7-20 (191)
222 d1ji0a_ c.37.1.12 (A:) Branche 66.1 1.2 9E-05 35.2 2.0 21 74-94 29-49 (240)
223 d1d0xa2 c.37.1.9 (A:2-33,A:80- 66.0 2.3 0.00017 39.6 4.3 58 39-96 79-144 (712)
224 d1vhta_ c.37.1.1 (A:) Dephosph 65.9 1.2 9.1E-05 34.3 2.0 15 80-94 6-20 (208)
225 d1lkxa_ c.37.1.9 (A:) Myosin S 65.7 2.6 0.00019 39.1 4.5 29 68-96 74-105 (684)
226 d1p5zb_ c.37.1.1 (B:) Deoxycyt 65.4 1.3 9.2E-05 34.9 2.0 18 77-94 2-19 (241)
227 d2fh5b1 c.37.1.8 (B:63-269) Si 64.3 1.5 0.00011 33.7 2.1 17 78-94 1-17 (207)
228 d1ry6a_ c.37.1.9 (A:) Kinesin 64.0 1.5 0.00011 36.8 2.2 19 76-94 82-102 (330)
229 d1jjva_ c.37.1.1 (A:) Dephosph 63.8 1.5 0.00011 33.7 2.0 15 80-94 5-19 (205)
230 d2b2na1 c.37.1.19 (A:26-333) T 62.7 26 0.0019 28.3 9.9 91 277-367 12-120 (308)
231 d1l7vc_ c.37.1.12 (C:) ABC tra 61.7 1.2 9E-05 35.0 1.2 21 74-94 22-42 (231)
232 d1ihua1 c.37.1.10 (A:1-296) Ar 61.6 3.2 0.00023 33.6 4.0 35 78-115 9-43 (296)
233 d1b0ua_ c.37.1.12 (A:) ATP-bin 61.3 1.7 0.00013 34.8 2.1 21 74-94 25-45 (258)
234 g1xew.1 c.37.1.12 (X:,Y:) Smc 60.9 1.4 0.0001 36.5 1.6 15 80-94 29-43 (329)
235 d2a9pa1 c.23.1.1 (A:2-118) DNA 60.0 9.6 0.0007 25.7 5.8 49 281-335 2-50 (117)
236 d1w7ja2 c.37.1.9 (A:63-792) My 59.8 3.9 0.00029 38.2 4.6 58 39-96 48-113 (730)
237 d1fx0a3 c.37.1.11 (A:97-372) C 59.7 3 0.00022 33.6 3.3 26 74-99 64-89 (276)
238 d1yt8a4 c.46.1.2 (A:243-372) T 59.2 5 0.00036 27.9 4.1 38 277-314 78-115 (130)
239 d2p67a1 c.37.1.10 (A:1-327) LA 58.1 5.1 0.00037 33.2 4.6 41 78-119 55-95 (327)
240 d1tmka_ c.37.1.1 (A:) Thymidyl 56.8 2.3 0.00017 32.8 2.1 19 76-94 2-20 (214)
241 d1ihua2 c.37.1.10 (A:308-586) 56.3 4.5 0.00033 32.4 4.0 33 80-115 23-55 (279)
242 d1tuea_ c.37.1.20 (A:) Replica 56.1 3.2 0.00023 31.6 2.6 17 78-94 54-70 (205)
243 d1w1wa_ c.37.1.12 (A:) Smc hea 56.0 2 0.00015 36.9 1.8 16 79-94 27-42 (427)
244 d1gsia_ c.37.1.1 (A:) Thymidyl 56.0 4.9 0.00036 30.4 4.0 15 80-94 3-17 (208)
245 d1u0la2 c.37.1.8 (A:69-293) Pr 56.0 3.4 0.00025 32.1 2.9 29 65-93 83-111 (225)
246 d1r8sa_ c.37.1.8 (A:) ADP-ribo 55.7 2.5 0.00018 30.3 2.0 16 79-94 2-17 (160)
247 d1vpla_ c.37.1.12 (A:) Putativ 55.6 2.5 0.00018 33.3 2.1 20 75-94 26-45 (238)
248 d1g6ha_ c.37.1.12 (A:) MJ1267 55.3 2.5 0.00018 33.7 2.0 20 75-94 28-47 (254)
249 d1krwa_ c.23.1.1 (A:) NTRC rec 55.3 24 0.0017 23.8 7.3 51 280-336 4-54 (123)
250 d1ksha_ c.37.1.8 (A:) ADP-ribo 55.0 2.6 0.00019 30.6 2.0 16 79-94 4-19 (165)
251 g1f2t.1 c.37.1.12 (A:,B:) Rad5 54.6 2.3 0.00017 34.3 1.8 43 310-355 235-280 (292)
252 d2onka1 c.37.1.12 (A:1-240) Mo 54.4 2.7 0.00019 33.1 2.0 17 78-94 25-41 (240)
253 d1a1va2 c.37.1.14 (A:326-624) 53.9 6.3 0.00046 31.8 4.3 37 109-149 37-73 (299)
254 d2g9na1 c.37.1.19 (A:21-238) I 53.2 3.2 0.00023 32.1 2.4 75 278-355 79-163 (218)
255 d2qm8a1 c.37.1.10 (A:5-327) Me 53.0 7.2 0.00052 32.1 4.7 17 78-94 52-68 (323)
256 d2bmfa2 c.37.1.14 (A:178-482) 52.5 6.1 0.00045 31.9 4.2 54 109-166 179-232 (305)
257 d1qhla_ c.37.1.12 (A:) Cell di 52.0 1 7.4E-05 34.3 -0.9 15 80-94 27-41 (222)
258 d1br2a2 c.37.1.9 (A:80-789) My 52.0 3.1 0.00023 38.7 2.4 28 68-95 79-109 (710)
259 d1xhfa1 c.23.1.1 (A:2-122) Aer 51.9 23 0.0016 23.8 6.7 49 281-335 4-52 (121)
260 d2ocpa1 c.37.1.1 (A:37-277) De 51.6 2.7 0.0002 32.9 1.7 17 78-94 3-19 (241)
261 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 51.1 2.6 0.00019 31.1 1.4 18 77-94 13-30 (186)
262 d1mvoa_ c.23.1.1 (A:) PhoP rec 51.1 17 0.0012 24.5 5.9 29 281-309 4-32 (121)
263 d1zesa1 c.23.1.1 (A:3-123) Pho 51.0 17 0.0013 24.4 5.9 49 281-335 2-50 (121)
264 d2mysa2 c.37.1.9 (A:4-33,A:80- 50.0 3.1 0.00022 39.3 2.0 27 69-95 112-141 (794)
265 g1ii8.1 c.37.1.12 (A:,B:) Rad5 49.7 3.3 0.00024 34.2 2.0 16 79-94 25-40 (369)
266 d1e69a_ c.37.1.12 (A:) Smc hea 49.7 3.1 0.00023 33.9 1.8 15 80-94 27-41 (308)
267 d1z5za1 c.37.1.19 (A:663-906) 49.4 29 0.0021 26.7 7.8 97 85-192 65-166 (244)
268 d1a7ja_ c.37.1.6 (A:) Phosphor 49.4 2.8 0.0002 34.0 1.4 15 80-94 7-21 (288)
269 d1ys7a2 c.23.1.1 (A:7-127) Tra 48.8 24 0.0017 23.7 6.3 106 259-372 6-118 (121)
270 d1deka_ c.37.1.1 (A:) Deoxynuc 48.7 3.6 0.00026 32.2 2.0 15 80-94 4-18 (241)
271 d2b2na1 c.37.1.19 (A:26-333) T 48.6 14 0.001 30.0 5.8 24 110-133 16-39 (308)
272 d1rrma_ e.22.1.2 (A:) Lactalde 48.1 21 0.0015 29.9 7.1 72 265-336 16-94 (385)
273 d3raba_ c.37.1.8 (A:) Rab3a {R 48.0 4 0.00029 29.8 2.0 15 80-94 8-22 (169)
274 d1gkub2 c.37.1.16 (B:251-498) 47.7 18 0.0013 28.0 6.3 73 109-189 26-99 (248)
275 d2qtvb1 c.37.1.8 (B:24-189) SA 47.5 4.2 0.00031 29.0 2.1 16 79-94 2-17 (166)
276 d1h65a_ c.37.1.8 (A:) Chloropl 47.2 4 0.00029 32.5 2.0 17 78-94 33-49 (257)
277 d1upta_ c.37.1.8 (A:) ADP-ribo 47.2 4.1 0.0003 29.3 2.0 17 78-94 6-22 (169)
278 d1kk8a2 c.37.1.9 (A:1-28,A:77- 46.9 3.5 0.00026 38.9 1.9 29 68-96 109-140 (789)
279 d2gc6a1 c.59.1.2 (A:297-425) F 46.9 16 0.0011 24.9 5.2 111 185-299 13-127 (129)
280 d1tq1a_ c.46.1.3 (A:) Thiosulf 46.7 4.6 0.00033 27.6 2.1 36 278-313 71-107 (119)
281 d1zd9a1 c.37.1.8 (A:18-181) AD 45.8 4.4 0.00032 29.3 2.0 16 79-94 4-19 (164)
282 d1mb3a_ c.23.1.1 (A:) Cell div 45.8 22 0.0016 23.9 5.8 26 302-327 44-69 (123)
283 d2f7sa1 c.37.1.8 (A:5-190) Rab 45.6 4.5 0.00033 30.0 2.0 15 79-93 7-21 (186)
284 d1z2aa1 c.37.1.8 (A:8-171) Rab 45.5 4.5 0.00033 29.3 2.0 16 79-94 4-19 (164)
285 d1kgsa2 c.23.1.1 (A:2-123) Pho 45.4 28 0.0021 23.3 6.3 69 264-337 11-81 (122)
286 d1zj6a1 c.37.1.8 (A:2-178) ADP 45.0 4.1 0.0003 29.8 1.7 16 78-93 16-31 (177)
287 d2a5ja1 c.37.1.8 (A:9-181) Rab 44.9 4.8 0.00035 29.5 2.1 16 79-94 5-20 (173)
288 d1peya_ c.23.1.1 (A:) Sporulat 44.8 25 0.0018 23.5 5.9 28 281-308 3-30 (119)
289 d1nrjb_ c.37.1.8 (B:) Signal r 44.7 4.6 0.00034 30.5 2.0 15 79-93 5-19 (209)
290 d1urha2 c.46.1.2 (A:149-268) 3 43.5 20 0.0014 24.0 5.2 37 278-314 81-118 (120)
291 d1mkya1 c.37.1.8 (A:2-172) Pro 43.5 5 0.00037 29.2 2.0 15 79-93 2-16 (171)
292 d2atva1 c.37.1.8 (A:5-172) Ras 43.3 5.1 0.00037 29.1 2.0 16 79-94 4-19 (168)
293 d2gj8a1 c.37.1.8 (A:216-376) P 43.2 4.4 0.00032 29.1 1.6 16 78-93 2-17 (161)
294 d1wmsa_ c.37.1.8 (A:) Rab9a {H 43.0 5.9 0.00043 28.9 2.4 15 80-94 9-23 (174)
295 d1c9ka_ c.37.1.11 (A:) Adenosy 42.9 8.1 0.00059 28.6 3.1 44 80-130 2-45 (180)
296 d1wmaa1 c.2.1.2 (A:2-276) Carb 42.9 62 0.0045 25.1 9.0 69 269-337 18-89 (275)
297 d1moza_ c.37.1.8 (A:) ADP-ribo 42.9 4.1 0.0003 30.1 1.4 17 78-94 18-34 (182)
298 d1zgza1 c.23.1.1 (A:2-121) Tor 42.8 36 0.0026 22.6 6.5 49 281-335 3-51 (120)
299 d1g3qa_ c.37.1.10 (A:) Cell di 42.5 9.4 0.00069 29.2 3.7 31 81-114 7-37 (237)
300 d1z06a1 c.37.1.8 (A:32-196) Ra 42.2 5.5 0.0004 28.7 2.0 16 79-94 4-19 (165)
301 d1kaoa_ c.37.1.8 (A:) Rap2a {H 42.0 5.5 0.0004 28.8 2.0 16 79-94 5-20 (167)
302 d2f9la1 c.37.1.8 (A:8-182) Rab 41.9 5.6 0.00041 29.1 2.1 16 79-94 6-21 (175)
303 d1i2ma_ c.37.1.8 (A:) Ran {Hum 41.8 5 0.00036 29.3 1.7 15 79-93 5-19 (170)
304 d2bmea1 c.37.1.8 (A:6-179) Rab 41.7 5 0.00037 29.3 1.8 15 80-94 8-22 (174)
305 d2pl1a1 c.23.1.1 (A:1-119) Pho 41.5 36 0.0026 22.6 6.3 27 300-326 41-67 (119)
306 d1gmxa_ c.46.1.3 (A:) Sulfurtr 41.4 12 0.00085 24.8 3.5 36 278-313 57-93 (108)
307 d1qxna_ c.46.1.3 (A:) Polysulf 40.9 6.8 0.00049 27.5 2.3 36 278-313 81-117 (137)
308 d1svia_ c.37.1.8 (A:) Probable 40.8 5.1 0.00037 29.9 1.7 15 79-93 25-39 (195)
309 d2cxxa1 c.37.1.8 (A:2-185) GTP 40.6 5.1 0.00037 29.5 1.7 16 79-94 2-17 (184)
310 d2erxa1 c.37.1.8 (A:6-176) di- 39.9 6.2 0.00045 28.6 2.0 15 79-93 4-18 (171)
311 d1z08a1 c.37.1.8 (A:17-183) Ra 39.9 6.2 0.00045 28.6 2.0 16 79-94 5-20 (167)
312 d1fzqa_ c.37.1.8 (A:) ADP-ribo 39.7 5.6 0.00041 29.0 1.7 15 79-93 18-32 (176)
313 d1z0fa1 c.37.1.8 (A:8-173) Rab 39.5 6.4 0.00047 28.4 2.0 16 79-94 6-21 (166)
314 d2jdia3 c.37.1.11 (A:95-379) C 39.5 7.4 0.00054 31.3 2.5 27 74-100 65-91 (285)
315 d1hyqa_ c.37.1.10 (A:) Cell di 39.5 13 0.00092 28.4 4.0 31 81-114 6-36 (232)
316 d1ky3a_ c.37.1.8 (A:) Rab-rela 39.1 6.4 0.00047 28.7 2.0 15 80-94 5-19 (175)
317 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 38.9 5.9 0.00043 29.0 1.8 16 79-94 4-19 (177)
318 d1r2qa_ c.37.1.8 (A:) Rab5a {H 38.8 6.7 0.00049 28.5 2.0 16 79-94 8-23 (170)
319 d1u0ja_ c.37.1.20 (A:) Rep 40 38.7 21 0.0015 28.2 5.2 43 50-94 74-121 (267)
320 d2fn4a1 c.37.1.8 (A:24-196) r- 38.4 6.1 0.00044 28.9 1.7 16 79-94 8-23 (173)
321 d2g6ba1 c.37.1.8 (A:58-227) Ra 38.3 6.9 0.0005 28.4 2.0 16 79-94 8-23 (170)
322 d1ys7a2 c.23.1.1 (A:7-127) Tra 38.3 50 0.0037 21.9 9.9 84 109-225 2-85 (121)
323 d2gjsa1 c.37.1.8 (A:91-258) Ra 38.1 6.9 0.0005 28.4 2.0 15 79-93 3-17 (168)
324 d2erya1 c.37.1.8 (A:10-180) r- 38.1 6.2 0.00045 28.7 1.7 16 79-94 7-22 (171)
325 d1x1ra1 c.37.1.8 (A:10-178) Ra 38.1 6.9 0.0005 28.4 2.0 16 79-94 6-21 (169)
326 d1wf3a1 c.37.1.8 (A:3-180) GTP 37.8 7 0.00051 28.6 2.0 15 79-93 7-21 (178)
327 d1cp2a_ c.37.1.10 (A:) Nitroge 37.6 11 0.00083 29.6 3.5 32 80-114 4-35 (269)
328 d1z3ix1 c.37.1.19 (X:390-735) 37.0 74 0.0054 25.9 8.7 97 85-192 97-199 (346)
329 d1c1ya_ c.37.1.8 (A:) Rap1A {H 36.9 7.5 0.00054 28.1 2.0 16 79-94 5-20 (167)
330 d1vlja_ e.22.1.2 (A:) NADH-dep 36.8 59 0.0043 27.1 8.3 72 266-337 21-100 (398)
331 d1udxa2 c.37.1.8 (A:157-336) O 36.8 6.1 0.00044 29.0 1.5 16 79-94 3-18 (180)
332 d1qkka_ c.23.1.1 (A:) Transcri 36.7 59 0.0043 22.2 10.1 44 182-228 44-87 (140)
333 d1azta2 c.37.1.8 (A:35-65,A:20 36.7 7.4 0.00054 29.9 2.0 17 77-93 6-22 (221)
334 d1u8za_ c.37.1.8 (A:) Ras-rela 36.6 7.6 0.00055 28.1 2.0 16 79-94 6-21 (168)
335 d1e0sa_ c.37.1.8 (A:) ADP-ribo 36.4 6 0.00044 28.8 1.4 16 79-94 14-29 (173)
336 d1z0ja1 c.37.1.8 (A:2-168) Rab 36.3 7.6 0.00055 28.0 2.0 16 79-94 6-21 (167)
337 d1u0sy_ c.23.1.1 (Y:) CheY pro 35.7 42 0.003 22.2 5.9 24 303-326 46-69 (118)
338 d1zcba2 c.37.1.8 (A:47-75,A:20 35.6 7.9 0.00057 28.8 2.0 16 79-94 4-19 (200)
339 d2g3ya1 c.37.1.8 (A:73-244) GT 35.6 8 0.00058 28.1 2.0 15 79-93 5-19 (172)
340 d1e2ka_ c.37.1.1 (A:) Thymidin 35.4 7.9 0.00058 31.9 2.1 16 79-94 6-21 (329)
341 d1yzqa1 c.37.1.8 (A:14-177) Ra 35.4 7.3 0.00053 28.0 1.8 16 79-94 2-17 (164)
342 d1mkya2 c.37.1.8 (A:173-358) P 35.4 6.8 0.0005 28.8 1.6 18 77-94 8-25 (186)
343 d2pjua1 c.92.3.1 (A:11-196) Pr 35.2 77 0.0056 23.1 9.9 116 281-405 2-123 (186)
344 d1lnza2 c.37.1.8 (A:158-342) O 35.2 8.4 0.00061 28.3 2.1 16 79-94 3-18 (185)
345 d1mh1a_ c.37.1.8 (A:) Rac {Hum 35.1 8.2 0.0006 28.4 2.0 16 79-94 7-22 (183)
346 d2ew1a1 c.37.1.8 (A:4-174) Rab 35.0 7.5 0.00054 28.2 1.8 16 79-94 7-22 (171)
347 d2afhe1 c.37.1.10 (E:1-289) Ni 34.9 13 0.00092 29.8 3.4 32 80-114 5-36 (289)
348 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 34.8 8.3 0.00061 27.9 2.0 16 79-94 5-20 (170)
349 d1g16a_ c.37.1.8 (A:) Rab-rela 34.8 7.6 0.00055 28.0 1.8 15 80-94 5-19 (166)
350 d2fu5c1 c.37.1.8 (C:3-175) Rab 34.6 6.9 0.00051 28.5 1.5 15 79-93 8-22 (173)
351 d1susa1 c.66.1.1 (A:21-247) Ca 34.4 88 0.0064 23.6 11.2 121 62-214 42-164 (227)
352 d1m7ba_ c.37.1.8 (A:) RhoE (RN 34.3 7.8 0.00056 28.5 1.8 16 79-94 4-19 (179)
353 d2bcgy1 c.37.1.8 (Y:3-196) GTP 34.2 7.8 0.00056 28.9 1.8 15 80-94 9-23 (194)
354 d1ctqa_ c.37.1.8 (A:) cH-p21 R 33.8 8 0.00058 27.9 1.7 16 79-94 5-20 (166)
355 d1t9ha2 c.37.1.8 (A:68-298) Pr 33.7 5 0.00036 31.2 0.5 23 71-93 91-113 (231)
356 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 33.6 8.9 0.00065 28.2 2.0 15 80-94 5-19 (184)
357 d1p6xa_ c.37.1.1 (A:) Thymidin 33.5 18 0.0013 29.6 4.1 16 79-94 8-23 (333)
358 d2ayxa1 c.23.1.1 (A:817-949) S 33.2 63 0.0046 21.8 6.6 28 281-308 10-37 (133)
359 d1w25a1 c.23.1.1 (A:2-140) Res 33.2 33 0.0024 23.6 5.1 26 282-307 4-29 (139)
360 d1xtqa1 c.37.1.8 (A:3-169) GTP 33.1 8.4 0.00061 27.8 1.8 17 78-94 5-21 (167)
361 d2atxa1 c.37.1.8 (A:9-193) Rho 32.2 8.6 0.00063 28.4 1.7 16 79-94 11-26 (185)
362 d1dbwa_ c.23.1.1 (A:) Transcri 32.1 65 0.0047 21.3 7.1 48 281-334 5-52 (123)
363 d1yt8a1 c.46.1.2 (A:107-242) T 31.9 23 0.0017 24.4 4.0 36 278-313 79-116 (136)
364 d1osna_ c.37.1.1 (A:) Thymidin 31.9 17 0.0012 29.9 3.6 16 79-94 7-22 (331)
365 d2ngra_ c.37.1.8 (A:) CDC42 {H 31.9 11 0.00083 27.8 2.4 16 79-94 5-20 (191)
366 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 31.5 9.1 0.00066 28.3 1.8 16 79-94 4-19 (200)
367 d1vl1a_ c.124.1.1 (A:) 6-phosp 31.3 29 0.0021 26.2 4.9 56 119-192 14-69 (218)
368 d1puia_ c.37.1.8 (A:) Probable 30.8 9.3 0.00068 27.8 1.7 16 78-93 17-32 (188)
369 d1x3sa1 c.37.1.8 (A:2-178) Rab 30.8 11 0.00077 27.5 2.0 16 79-94 9-24 (177)
370 d1ny5a1 c.23.1.1 (A:1-137) Tra 30.7 48 0.0035 22.6 5.6 104 260-371 6-116 (137)
371 d1svsa1 c.37.1.8 (A:32-60,A:18 29.6 11 0.00082 27.6 2.0 16 79-94 4-19 (195)
372 d1ozbi_ g.74.1.1 (I:) Preprote 29.4 8 0.00059 18.0 0.6 9 84-92 7-15 (26)
373 d2bmja1 c.37.1.8 (A:66-240) Ce 28.9 12 0.00086 27.4 2.0 16 79-94 7-22 (175)
374 d1zh2a1 c.23.1.1 (A:2-120) Tra 28.8 59 0.0043 21.4 5.7 23 304-326 45-67 (119)
375 d1qkka_ c.23.1.1 (A:) Transcri 28.5 47 0.0034 22.8 5.3 42 296-337 37-80 (140)
376 d2bv3a2 c.37.1.8 (A:7-282) Elo 27.6 14 0.001 29.4 2.3 18 78-95 7-24 (276)
377 d2c07a1 c.2.1.2 (A:54-304) bet 27.3 1.2E+02 0.0089 23.0 10.1 69 268-337 24-95 (251)
378 d1egaa1 c.37.1.8 (A:4-182) GTP 27.2 14 0.00099 26.7 2.1 15 80-94 8-22 (179)
379 d1wb9a2 c.37.1.12 (A:567-800) 27.2 15 0.0011 28.5 2.3 17 77-93 41-57 (234)
380 d1luaa1 c.2.1.7 (A:98-288) Met 25.9 42 0.0031 24.5 4.8 79 75-166 21-100 (191)
381 d1e0ca2 c.46.1.2 (A:136-271) S 25.3 25 0.0018 24.3 3.1 36 278-313 87-123 (136)
382 d1yt8a2 c.46.1.2 (A:6-106) Thi 25.2 36 0.0026 21.6 3.8 36 278-313 57-93 (101)
383 d1rhsa2 c.46.1.2 (A:150-293) R 24.7 28 0.002 24.3 3.3 46 268-313 77-126 (144)
384 d1krwa_ c.23.1.1 (A:) NTRC rec 24.6 90 0.0066 20.5 10.6 88 109-229 4-91 (123)
385 d1fmca_ c.2.1.2 (A:) 7-alpha-h 24.5 1.4E+02 0.01 22.7 8.4 69 268-337 25-96 (255)
386 d1yioa2 c.23.1.1 (A:3-130) Res 24.3 76 0.0055 21.1 5.7 73 260-337 8-82 (128)
387 d1zuna1 c.26.2.2 (A:1-211) Sul 23.8 43 0.0031 24.3 4.6 73 65-140 10-87 (211)
388 d1o5za1 c.59.1.2 (A:294-430) F 23.4 66 0.0048 21.7 5.2 54 184-239 11-64 (137)
389 d1xzpa2 c.37.1.8 (A:212-371) T 23.0 7.7 0.00056 27.6 -0.2 16 79-94 2-17 (160)
390 g1f2t.1 c.37.1.12 (A:,B:) Rad5 22.8 22 0.0016 27.9 2.7 40 183-222 226-266 (292)
391 d1xhfa1 c.23.1.1 (A:2-122) Aer 22.5 99 0.0072 20.3 11.8 88 109-230 3-90 (121)
392 d1ycga1 c.23.5.1 (A:251-399) N 22.4 84 0.0061 21.5 5.7 58 280-340 3-65 (149)
393 d2rhca1 c.2.1.2 (A:5-261) beta 21.5 1.6E+02 0.012 22.3 9.4 59 279-337 26-87 (257)
394 g1qtn.1 c.17.1.1 (A:,B:) Caspa 21.4 1E+02 0.0075 23.2 6.6 37 290-327 43-79 (242)
395 d1yb1a_ c.2.1.2 (A:) 17-beta-h 21.1 1.6E+02 0.012 22.2 7.6 70 268-338 21-93 (244)
396 d1ny5a1 c.23.1.1 (A:1-137) Tra 20.9 1.2E+02 0.0084 20.4 12.2 57 164-228 31-87 (137)
397 d1o54a_ c.66.1.13 (A:) Hypothe 20.7 69 0.005 24.9 5.3 51 252-304 172-222 (266)
398 d1o2da_ e.22.1.2 (A:) Alcohol 20.6 1.3E+02 0.0098 24.2 7.5 72 265-337 15-94 (359)
399 d1e0ta3 c.49.1.1 (A:354-470) P 20.6 35 0.0026 22.8 3.0 36 81-123 20-55 (117)
400 d2piaa2 c.25.1.2 (A:104-223) P 20.6 31 0.0022 22.8 2.8 18 158-175 90-107 (120)
401 d1e69a_ c.37.1.12 (A:) Smc hea 20.6 23 0.0017 28.2 2.4 41 183-223 242-282 (308)
402 d1p77a1 c.2.1.7 (A:102-272) Sh 20.5 35 0.0026 24.5 3.2 48 75-130 16-63 (171)
403 d1zl0a2 c.23.16.7 (A:3-169) LD 20.3 1.4E+02 0.01 21.2 6.8 57 281-337 15-84 (167)
404 d2vgba3 c.49.1.1 (A:440-573) P 20.3 40 0.0029 23.1 3.4 36 81-123 31-66 (134)
405 d1dcfa_ c.23.1.2 (A:) Receiver 20.2 1.1E+02 0.0079 20.5 5.8 34 278-311 6-39 (134)
406 d2r25b1 c.23.1.1 (B:1087-1214) 20.0 1.2E+02 0.0085 20.1 6.1 48 181-230 50-97 (128)
No 1
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3.5e-39 Score=271.07 Aligned_cols=207 Identities=65% Similarity=1.002 Sum_probs=194.7
Q ss_pred hhccCcccCCCCHHHHHHHHHCCCCCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcC
Q 015129 37 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAP 116 (413)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P 116 (413)
+...+|++++|++.+.++|++.||..|+|+|..+++.+++|+|+++.||||||||++|++++++.+......++++|++|
T Consensus 14 ~~~~sF~~l~L~~~l~~~L~~~g~~~pt~IQ~~aIp~il~g~dvi~~a~TGSGKTlayllPil~~l~~~~~~~~~lil~P 93 (222)
T d2j0sa1 14 DVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAP 93 (222)
T ss_dssp CCCCSGGGGCCCHHHHHHHHHHTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHTCCTTSCSCCEEEECS
T ss_pred CCCCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCeEEEcCcchhhhhhhcccccccccccccCceeEEecc
Confidence 44568999999999999999999999999999999999999999999999999999999999999988777789999999
Q ss_pred cHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhc
Q 015129 117 TRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLS 196 (413)
Q Consensus 117 ~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~ 196 (413)
|++|+.|.++.+.+++...++++..+.|+............+++|+|+||+++.+++......+++++++|+||||.+.+
T Consensus 94 treLa~Qi~~~~~~l~~~~~i~~~~~~g~~~~~~~~~~l~~~~~Ilv~TPgrl~~~~~~~~~~~~~l~~lVlDEaD~ll~ 173 (222)
T d2j0sa1 94 TRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLN 173 (222)
T ss_dssp SHHHHHHHHHHHHHHTTTTTCCEEEECTTSCHHHHHHHHHHCCSEEEECHHHHHHHHHTTSSCCTTCCEEEEETHHHHTS
T ss_pred hHHHHHHHHHHHHHHhCccceeEEEEeecccchhhHHHhccCCeEEeCCCCcHHhcccccccccccceeeeecchhHhhh
Confidence 99999999999999998889999999999998888777788899999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHhhCCCCceEEEEEeeCCHhHHHHHHHhcCCCEEEEe
Q 015129 197 RGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILV 243 (413)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~~~~~~~~~~~~~ 243 (413)
.++...+..++..++...|++++|||.+.+..++.+.++.+|+.+.+
T Consensus 174 ~~f~~~i~~I~~~l~~~~Q~ilfSAT~~~~v~~l~~~~l~~Pv~I~V 220 (222)
T d2j0sa1 174 KGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILV 220 (222)
T ss_dssp TTTHHHHHHHHTTSCTTCEEEEEESCCCHHHHTTGGGTCSSCEEECC
T ss_pred cCcHHHHHHHHHhCCCCCEEEEEEEeCCHHHHHHHHHHCCCCEEEEE
Confidence 99999999999999999999999999999998999999998876654
No 2
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=9e-38 Score=260.80 Aligned_cols=203 Identities=37% Similarity=0.623 Sum_probs=187.8
Q ss_pred ccCcccCCCCHHHHHHHHHCCCCCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcH
Q 015129 39 YDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTR 118 (413)
Q Consensus 39 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~ 118 (413)
..+|++++|++.+.++|.+.||..|+|+|.++++.+++|+|+++.||||||||++|++++++.+.....+++++|++|++
T Consensus 2 ~~~F~~l~L~~~l~~~l~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlayllP~l~~~~~~~~~~~~lil~pt~ 81 (206)
T d1veca_ 2 GNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTR 81 (206)
T ss_dssp CSSGGGSCCCHHHHHHHHTTTCCSCCHHHHHHHHHHHTTCCEEEECCSSSTTHHHHHHHHHHHCCTTSCSCCEEEECSCH
T ss_pred CCChhccCcCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEeeccCccccccccccchhhcccccccCcceEEEeecc
Confidence 36899999999999999999999999999999999999999999999999999999999999998888888999999999
Q ss_pred HHHHHHHHHHHHhhccc-CcEEEEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhcc
Q 015129 119 ELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR 197 (413)
Q Consensus 119 ~l~~q~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~ 197 (413)
+|+.|..+.+..+.... +..+....|+.........+..+++|+|+||+++.+++..+...+++++++|+||||.+.+.
T Consensus 82 el~~q~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ivv~TPgrl~~~~~~~~~~~~~l~~lVlDEaD~ll~~ 161 (206)
T d1veca_ 82 ELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQ 161 (206)
T ss_dssp HHHHHHHHHHHHHTTTSSSCCEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHTTCSCCTTCCEEEEETHHHHTST
T ss_pred hhhHHHHHHHHHHhhcccCcccccccCCccHHHHHHHHHhccCeEEeCCccccccccchhccccccceEEEecccccccc
Confidence 99999999998876544 45667777787777777777788999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhCCCCceEEEEEeeCCHhHHHHHHHhcCCCEEE
Q 015129 198 GFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRI 241 (413)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~~~~~~~~~~~ 241 (413)
+|...+..++..++.+.|++++|||++.+..++.+.++.+|..+
T Consensus 162 ~f~~~i~~I~~~~~~~~Q~~l~SAT~~~~v~~l~~~~l~~P~~I 205 (206)
T d1veca_ 162 DFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLEKPYEI 205 (206)
T ss_dssp TTHHHHHHHHHHSCTTCEEEEEESCCCHHHHHHHHHHCSSCEEE
T ss_pred chHHHHHHHHHhCCCCCEEEEEEecCCHHHHHHHHHHCCCCEEE
Confidence 99999999999999999999999999999999999999988654
No 3
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3.8e-38 Score=264.77 Aligned_cols=211 Identities=68% Similarity=1.062 Sum_probs=190.7
Q ss_pred CCchhhccCcccCCCCHHHHHHHHHCCCCCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEE
Q 015129 33 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQAL 112 (413)
Q Consensus 33 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~l 112 (413)
..+.++..+|+++++++.+.++|.+.|+.+|+++|..+++.+++|+|+++.||||||||++|++++++.+.....+++++
T Consensus 5 ~~~~e~i~sF~~l~L~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlayllp~l~~i~~~~~~~~al 84 (218)
T d2g9na1 5 SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQAL 84 (218)
T ss_dssp CCCCCCCCCGGGSCCCHHHHHHHHHHTCCSCCHHHHHHHHHHHHTCCEEEECCTTSSHHHHHHHHHHHHCCTTCCSCCEE
T ss_pred CCCCCccCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEEEcccchhhhhhhhhhhhheecccccCccEE
Confidence 45667889999999999999999999999999999999999999999999999999999999999999998777788999
Q ss_pred EEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHH-HHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccc
Q 015129 113 VLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ-RILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEA 191 (413)
Q Consensus 113 iv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~ 191 (413)
|++|+++|+.|.++.+..+....+.....+.++....... ......++|+|+||+++.+++.++...+++++++|+|||
T Consensus 85 il~Pt~eL~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IvV~TP~rl~~~l~~~~~~~~~l~~lVlDEa 164 (218)
T d2g9na1 85 VLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEA 164 (218)
T ss_dssp EECSSHHHHHHHHHHHHHHHTTTTCCEEEECC--CCCSTTTSSSSCCCSEEEECHHHHHHHHHTTSSCSTTCCEEEEESH
T ss_pred EEcccchhhhhHHHHHhhhccccceeEEeeecccchhHHHHHHhcCCCEEEEeCChhHHHHHhcCCcccccceEEEeeec
Confidence 9999999999999999999988888887777665543332 223356899999999999999998899999999999999
Q ss_pred hHHhccCcHHHHHHHHhhCCCCceEEEEEeeCCHhHHHHHHHhcCCCEEEEe
Q 015129 192 DEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILV 243 (413)
Q Consensus 192 h~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~~~~~~~~~~~~~ 243 (413)
|.+.+.++...+..++..++.+.|++++|||.+.+...+.+.++.+|..+.+
T Consensus 165 D~ll~~~f~~~~~~Il~~~~~~~Q~il~SAT~~~~v~~~~~~~l~~pv~i~v 216 (218)
T d2g9na1 165 DEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILV 216 (218)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTCEEEEEESCCCHHHHHHHHHHCSSCEEEEC
T ss_pred chhhcCchHHHHHHHHHhCCCCCeEEEEEecCCHHHHHHHHHHCCCCEEEEE
Confidence 9999999999999999999999999999999999999999999999987664
No 4
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.3e-37 Score=260.64 Aligned_cols=209 Identities=61% Similarity=0.937 Sum_probs=186.7
Q ss_pred CCchhhccCcccCCCCHHHHHHHHHCCCCCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEE
Q 015129 33 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQAL 112 (413)
Q Consensus 33 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~l 112 (413)
..++++..+|++++|++++.++|.+.|+.+|++.|..+++.+++|+|+++.+|||||||++|++++++.+.....+++++
T Consensus 3 ~~~~~~~~sF~~l~l~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~a~~lp~i~~l~~~~~~~~~l 82 (212)
T d1qdea_ 3 TNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQAL 82 (212)
T ss_dssp BSCCCCCCCGGGGTCCHHHHHHHHHHTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHHCCTTCCSCCEE
T ss_pred CCCcccccChhhCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEeecccccchhhhhHhhhHhhhhccCCCcceE
Confidence 46788899999999999999999999999999999999999999999999999999999999999999998888888999
Q ss_pred EEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccch
Q 015129 113 VLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 192 (413)
Q Consensus 113 iv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h 192 (413)
|++|+++++.|....+..+............++.....+.... .+++|+|+||+++..++..+...+++++++|+||||
T Consensus 83 il~pt~el~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~IvI~TP~~l~~~~~~~~~~l~~l~~lVlDEad 161 (212)
T d1qdea_ 83 MLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGL-RDAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEAD 161 (212)
T ss_dssp EECSSHHHHHHHHHHHHHHTTTSCCCEEEECC----------C-TTCSEEEECHHHHHHHHHTTSSCCTTCCEEEEETHH
T ss_pred EEcccHHHhhhhhhhhcccccccccceeeEeeccchhHHHHHh-cCCcEEEECCCccccccccCceecCcceEEeehhhh
Confidence 9999999999999999998887777777777766655544433 468999999999999999999999999999999999
Q ss_pred HHhccCcHHHHHHHHhhCCCCceEEEEEeeCCHhHHHHHHHhcCCCEEEE
Q 015129 193 EMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRIL 242 (413)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~~~~~~~~~~~~ 242 (413)
.+.+.++...+..+++.++...|++++|||++++...+.+.++.+|+.+.
T Consensus 162 ~lld~~f~~~v~~I~~~~~~~~Q~vl~SAT~~~~v~~l~~~~l~~Pv~i~ 211 (212)
T d1qdea_ 162 EMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRIL 211 (212)
T ss_dssp HHHHTTCHHHHHHHHHHSCTTCEEEEEESSCCHHHHHHHHHHCSSCEEEC
T ss_pred hhcccchHHHHHHHHHhCCCCCeEEEEEeeCCHHHHHHHHHHCCCCEEEe
Confidence 99999999999999999999999999999999999999999999987653
No 5
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=5.9e-37 Score=256.00 Aligned_cols=203 Identities=41% Similarity=0.636 Sum_probs=183.6
Q ss_pred cCcccCCCCHHHHHHHHHCCCCCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHH
Q 015129 40 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 119 (413)
Q Consensus 40 ~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~ 119 (413)
..|++++|++.+.++|.+.||.+|+|+|.++++.+++|+|+++.||||||||++|++++++.+.....+++++|++|+++
T Consensus 1 s~F~dl~L~~~l~~~l~~~g~~~pt~iQ~~aip~il~g~dvl~~A~TGsGKTla~~lp~l~~~~~~~~~~~~lil~Ptre 80 (207)
T d1t6na_ 1 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRE 80 (207)
T ss_dssp CCSTTSCCCHHHHHHHHHTTCCCCCHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHCCCCTTCCCEEEECSCHH
T ss_pred CCccccCcCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCeEEEeccccccccccccceeeeecccCCCceEEEEeccch
Confidence 36999999999999999999999999999999999999999999999999999999999999988888889999999999
Q ss_pred HHHHHHHHHHHhhcccC-cEEEEEEcCcchHHHHHH-HHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhcc
Q 015129 120 LAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRI-LQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR 197 (413)
Q Consensus 120 l~~q~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~ 197 (413)
|+.|+.+.++.+....+ .....+.|+......... ....++|+|+||+++.+++.++...++++.++|+||||.+.+.
T Consensus 81 L~~qi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ilI~TP~rl~~~~~~~~~~l~~l~~lVlDEaD~ll~~ 160 (207)
T d1t6na_ 81 LAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQ 160 (207)
T ss_dssp HHHHHHHHHHHHTTTSTTCCEEEESCCSCHHHHHHHHHHSCCSEEEECHHHHHHHHHTTSSCCTTCCEEEEESHHHHHSS
T ss_pred hhHHHHHHHHHHHhhCCCceeEEEeccccHHHHHHHHHhcCCCEEEeCcchhhhhccCCceeccccceeehhhhhhhhhc
Confidence 99999999999887654 466777777776655444 4567899999999999999998889999999999999999874
Q ss_pred -CcHHHHHHHHhhCCCCceEEEEEeeCCHhHHHHHHHhcCCCEEEE
Q 015129 198 -GFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRIL 242 (413)
Q Consensus 198 -~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~~~~~~~~~~~~ 242 (413)
++...+..+...+++..|++++|||++++..++.+.++.+|..+.
T Consensus 161 ~~~~~~i~~I~~~~~~~~Q~il~SAT~~~~v~~l~~~~l~~P~~I~ 206 (207)
T d1t6na_ 161 LDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 206 (207)
T ss_dssp HHHHHHHHHHHHTSCSSSEEEEEESCCCTTTHHHHHTTCSSCEEEE
T ss_pred CCcHHHHHHHHHhCCCCCEEEEEeeeCCHHHHHHHHHHCCCCEEEe
Confidence 788999999999999999999999999999999999999887654
No 6
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=5.8e-36 Score=250.55 Aligned_cols=202 Identities=35% Similarity=0.595 Sum_probs=183.9
Q ss_pred ccCcccCCCCHHHHHHHHHCCCCCCcHHHHhhhhhhhcCC-cEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCc
Q 015129 39 YDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL-DVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPT 117 (413)
Q Consensus 39 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~i~~~~-~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~ 117 (413)
+-+|+++++++.+.++|.+.|+.+|+|.|.++++.+++|+ ++++.+|||+|||++|++++++..... .+++++|++|+
T Consensus 3 ~msf~~l~l~~~l~~~l~~~g~~~pt~iQ~~~ip~~l~g~~d~iv~a~TGsGKT~~~~l~~~~~~~~~-~~~~~lil~pt 81 (208)
T d1hv8a1 3 YMNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIELVNEN-NGIEAIILTPT 81 (208)
T ss_dssp CCCGGGSSCCHHHHHHHHHHTCCSCCHHHHHHHHHHHHTCSEEEEECCSSSSHHHHHHHHHHHHSCSS-SSCCEEEECSC
T ss_pred ccCHHHcCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCCeeeechhcccccceeecccccccccc-cCcceEEEeec
Confidence 3489999999999999999999999999999999999875 999999999999999999998866543 45699999999
Q ss_pred HHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhcc
Q 015129 118 RELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR 197 (413)
Q Consensus 118 ~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~ 197 (413)
++|+.|+.+.+..+....+.++..+.|+.....+.+.. .+++|+|+||+++.+++.++...+++++++|+||||.+.+.
T Consensus 82 ~~l~~q~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~l-~~~~IlV~TP~~l~~~l~~~~~~~~~l~~lViDEad~l~~~ 160 (208)
T d1hv8a1 82 RELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKAL-KNANIVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNM 160 (208)
T ss_dssp HHHHHHHHHHHHHHHCSSCCCEEEECTTSCHHHHHHHH-HTCSEEEECHHHHHHHHHTTCSCTTSCCEEEEETHHHHHTT
T ss_pred cccchhhhhhhhhhcccCCeEEEEeeCCCChHHHHHhc-CCCCEEEEChHHHHHHHHcCCCCcccCcEEEEEChHHhhcC
Confidence 99999999999999988899999999988877665544 46899999999999999998889999999999999999999
Q ss_pred CcHHHHHHHHhhCCCCceEEEEEeeCCHhHHHHHHHhcCCCEEEE
Q 015129 198 GFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRIL 242 (413)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~~~~~~~~~~~~ 242 (413)
++...+..++..++.+.|++++|||++++..++.+.++.++..+.
T Consensus 161 ~~~~~i~~I~~~~~~~~Q~i~~SAT~~~~v~~~~~~~l~~~~~I~ 205 (208)
T d1hv8a1 161 GFIKDVEKILNACNKDKRILLFSATMPREILNLAKKYMGDYSFIK 205 (208)
T ss_dssp TTHHHHHHHHHTSCSSCEEEEECSSCCHHHHHHHHHHCCSEEEEE
T ss_pred CChHHHHHHHHhCCCCCeEEEEEccCCHHHHHHHHHHCCCCeEEE
Confidence 999999999999999999999999999999999999998876654
No 7
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=5.8e-36 Score=250.52 Aligned_cols=204 Identities=42% Similarity=0.649 Sum_probs=193.1
Q ss_pred cCcccCCCCHHHHHHHHHCCCCCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHH
Q 015129 40 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 119 (413)
Q Consensus 40 ~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~ 119 (413)
++|++++|++.+.++|++.||.+|+|.|..+++.+++|+|+++.||||||||++|++++++.+.....+.+.++++|+.+
T Consensus 1 ~sF~~l~L~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvi~~a~tGsGKTlay~lp~i~~~~~~~~~~~~~~~~~~~~ 80 (206)
T d1s2ma1 1 NTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRE 80 (206)
T ss_dssp CCGGGGCCCHHHHHHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHCCTTSCSCCEEEECSSHH
T ss_pred CChHHcCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEEecCCcchhhhhhccccccccccccccccceeeccchh
Confidence 48999999999999999999999999999999999999999999999999999999999999988888889999999999
Q ss_pred HHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhccCc
Q 015129 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGF 199 (413)
Q Consensus 120 l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~~ 199 (413)
++.+....+..+....++++....|+.........+..+++|+|+||+.+.++++.+...+.+++++|+||||.+.+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~Ili~TP~~l~~~l~~~~~~l~~l~~lV~DEaD~l~~~~f 160 (206)
T d1s2ma1 81 LALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDF 160 (206)
T ss_dssp HHHHHHHHHHHHTTTTTCCEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHTTCSCCTTCCEEEEESHHHHSSHHH
T ss_pred hhhhhhhhhhhcccccCeeEEeecCccchhhHHHHhcccceEEEECCcccccccccceeecccceEEEeechhhhhhhhh
Confidence 99999999999998899999999999998888888888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCceEEEEEeeCCHhHHHHHHHhcCCCEEEEe
Q 015129 200 KDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILV 243 (413)
Q Consensus 200 ~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~~~~~~~~~~~~~ 243 (413)
...+..++..++...|++++|||++++...+...++.+|..+..
T Consensus 161 ~~~v~~I~~~l~~~~Q~il~SATl~~~v~~~~~~~l~~P~~I~~ 204 (206)
T d1s2ma1 161 KTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINL 204 (206)
T ss_dssp HHHHHHHHTTSCSSCEEEEEESCCCHHHHHHHHHHCSSCEEESC
T ss_pred HHHHHHHHHhCCCCCEEEEEEEeCCHHHHHHHHHHCCCCEEEEe
Confidence 99999999999999999999999999999999999998876543
No 8
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=100.00 E-value=7.5e-36 Score=254.43 Aligned_cols=209 Identities=32% Similarity=0.488 Sum_probs=190.0
Q ss_pred chhhccCcccCCCCHHHHHHHHHCCCCCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccC---------
Q 015129 35 YDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYG--------- 105 (413)
Q Consensus 35 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~--------- 105 (413)
...+..+|++++|++++.++|.+.||..|+++|..+++.+++|+|+++.+|||||||++|++++++.+...
T Consensus 16 ~~~~~~~F~~l~l~~~l~~~L~~~g~~~pt~iQ~~~ip~il~g~dvvi~a~TGsGKTlayllp~l~~l~~~~~~~~~~~~ 95 (238)
T d1wrba1 16 ATNVIENFDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPIINHLVCQDLNQQRYSK 95 (238)
T ss_dssp CCSCCCSSGGGSCCCSTTTTTTTTTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHHHHTTCC------C
T ss_pred CCCccCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHhhhhhCCCCEEEECCCCCCcceeeHHHHHHHHHhcccccccccC
Confidence 34568899999999999999999999999999999999999999999999999999999999999987432
Q ss_pred CCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceE
Q 015129 106 LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKM 185 (413)
Q Consensus 106 ~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~ 185 (413)
..+++++|++|+++|+.|+.+.+..+....++++..+.|+.....+.+....+++|+|+||++|.+++..+...+.++++
T Consensus 96 ~~~~~alil~pt~el~~q~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ivV~TP~~l~~~~~~~~~~l~~v~~ 175 (238)
T d1wrba1 96 TAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIREVQMGCHLLVATPGRLVDFIEKNKISLEFCKY 175 (238)
T ss_dssp CBCCSEEEECSSHHHHHHHHHHHHHHHTTSSCCEEEECSSSCSHHHHHHHSSCCSEEEECHHHHHHHHHTTSBCCTTCCE
T ss_pred CCCceEEEeccchhhhcchheeeeecccCCCcEEEEEeccchhhHHHhhcccCCceeecCHHHHHhHHccCceeccccce
Confidence 23468999999999999999999999988899999999998888777777788999999999999999998889999999
Q ss_pred EEeccchHHhccCcHHHHHHHHhhCC----CCceEEEEEeeCCHhHHHHHHHhcCCCEEEEe
Q 015129 186 FVLDEADEMLSRGFKDQIYDIFQLLP----AKVQVGVFSATMPPEALEITRKFMNKPVRILV 243 (413)
Q Consensus 186 iV~DE~h~~~~~~~~~~~~~~~~~~~----~~~~~i~~SaT~~~~~~~~~~~~~~~~~~~~~ 243 (413)
+|+||+|.+.+.+|...+..+++.+. .+.|++++|||++.+...+.+.++.+|+.+.+
T Consensus 176 lViDEaD~ll~~~f~~~i~~Il~~~~~~~~~~~Q~il~SAT~~~~v~~l~~~~~~~p~~i~v 237 (238)
T d1wrba1 176 IVLDEADRMLDMGFEPQIRKIIEESNMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTV 237 (238)
T ss_dssp EEEETHHHHHHTTCHHHHHHHHHSSCCCCGGGCEEEEEESSCCHHHHHHHHHHCSSCEEEEE
T ss_pred eeeehhhhhhhhccHHHHHHHHHHhcCCCCCCCEEEEEeeeCCHHHHHHHHHHCCCCEEEEe
Confidence 99999999999999999999988654 25699999999999999999999998876653
No 9
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00 E-value=4.9e-34 Score=240.14 Aligned_cols=204 Identities=33% Similarity=0.508 Sum_probs=180.5
Q ss_pred cCcccCCCCHHHHHHHHHCCCCCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHH
Q 015129 40 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 119 (413)
Q Consensus 40 ~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~ 119 (413)
..|+++||++.+.++|++.||.+|+++|.++++.+++|+|+++.||||||||++|++++++.+.........++++|+..
T Consensus 1 t~F~~l~L~~~l~~~l~~~g~~~pt~iQ~~aip~~l~G~dvii~a~TGSGKTlayllp~l~~~~~~~~~~~~~~~~~~~~ 80 (209)
T d1q0ua_ 1 TQFTRFPFQPFIIEAIKTLRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLLPIMEKIKPERAEVQAVITAPTRE 80 (209)
T ss_dssp CCGGGSCCCHHHHHHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCSSHHHHHHHHHHHHHHCCTTSCSCCEEEECSSHH
T ss_pred CccccCCcCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCeEeecccccccceeeeeeeccccccccccccccccccccc
Confidence 36999999999999999999999999999999999999999999999999999999999999988877789999999999
Q ss_pred HHHHHHHHHHHhhccc----CcEEEEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHh
Q 015129 120 LAQQIEKVMRALGDYL----GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEML 195 (413)
Q Consensus 120 l~~q~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~ 195 (413)
++.+....+....... ...+....++.+..........+++|+|+||+++..++.+....+.+++++|+||||.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ilv~TP~~l~~~~~~~~~~~~~l~~lViDEad~ll 160 (209)
T d1q0ua_ 81 LATQIYHETLKITKFCPKDRMIVARCLIGGTDKQKALEKLNVQPHIVIGTPGRINDFIREQALDVHTAHILVVDEADLML 160 (209)
T ss_dssp HHHHHHHHHHHHHTTSCGGGCCCEEEECCCSHHHHTTCCCSSCCSEEEECHHHHHHHHHTTCCCGGGCCEEEECSHHHHH
T ss_pred hhHHHHHHHHhhhccccccccccccccccchhhHHHHHHhccCceEEEecCchhhhhhhhhccccccceEEEEeeccccc
Confidence 9999988887654433 345555666655544444445678999999999999999988889999999999999999
Q ss_pred ccCcHHHHHHHHhhCCCCceEEEEEeeCCHhHHHHHHHhcCCCEEEEe
Q 015129 196 SRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILV 243 (413)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~~~~~~~~~~~~~ 243 (413)
+.++...+..++..++++.|++++|||++++...+.+.++.+|..+.+
T Consensus 161 ~~~f~~~v~~I~~~~~~~~Q~il~SATl~~~v~~l~~~~l~~p~~i~V 208 (209)
T d1q0ua_ 161 DMGFITDVDQIAARMPKDLQMLVFSATIPEKLKPFLKKYMENPTFVHV 208 (209)
T ss_dssp HTTCHHHHHHHHHTSCTTCEEEEEESCCCGGGHHHHHHHCSSCEEEEC
T ss_pred ccccHHHHHHHHHHCCCCCEEEEEEccCCHHHHHHHHHHCCCCEEEEe
Confidence 999999999999999999999999999999999999999998877653
No 10
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=100.00 E-value=1.3e-34 Score=259.16 Aligned_cols=272 Identities=18% Similarity=0.134 Sum_probs=182.8
Q ss_pred hhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHH
Q 015129 74 FCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 153 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (413)
+.+++++++.||||||||++++.+++...... +.++||++|+++|+.|+++.++.+....... ....
T Consensus 6 ~~~~~~~lv~~~TGsGKT~~~l~~~~~~~~~~--~~~~lvi~Ptr~La~q~~~~l~~~~~~~~~~-----------~~~~ 72 (305)
T d2bmfa2 6 FRKKRLTIMDLHPGAGKTKRYLPAIVREAIKR--GLRTLILAPTRVVAAEMEEALRGLPIRYQTP-----------AIRA 72 (305)
T ss_dssp SSTTCEEEECCCTTSSTTTTHHHHHHHHHHHH--TCCEEEEESSHHHHHHHHHHTTTSCCBCCC----------------
T ss_pred hhcCCcEEEEECCCCCHHHHHHHHHHHHHHhc--CCEEEEEccHHHHHHHHHHHHhcCCcceeee-----------EEee
Confidence 45789999999999999998877776554332 3489999999999999998887653221110 0111
Q ss_pred HHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhccCcHHHHHHHHhh--CCCCceEEEEEeeCCHhHHHHH
Q 015129 154 ILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQL--LPAKVQVGVFSATMPPEALEIT 231 (413)
Q Consensus 154 ~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~~~~~~~~~~~~--~~~~~~~i~~SaT~~~~~~~~~ 231 (413)
.......++++|++.|...... ...+.+++++|+||+|++...++. ...++.. .....+++++|||++.....
T Consensus 73 ~~~~~~~i~~~t~~~l~~~~~~-~~~~~~~~~vViDE~H~~~~~~~~--~~~~l~~~~~~~~~~~v~~SAT~~~~~~~-- 147 (305)
T d2bmfa2 73 EHTGREIVDLMCHATFTMRLLS-PIRVPNYNLIIMDEAHFTDPASIA--ARGYISTRVEMGEAAGIFMTATPPGSRDP-- 147 (305)
T ss_dssp ---CCCSEEEEEHHHHHHHHTS-SSCCCCCSEEEEESTTCCSHHHHH--HHHHHHHHHHHTSCEEEEECSSCTTCCCS--
T ss_pred cccCccccccCCcHHHHHHHhc-CccccceeEEEeeeeeecchhhHH--HHHHHHHhhccccceEEEeecCCCcceee--
Confidence 1234568999999988766553 445678999999999987544321 2222221 12467899999998743211
Q ss_pred HHhcCCCEEEEecCCcccccCeEEEEEEeccccchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecC
Q 015129 232 RKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 311 (413)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~ 311 (413)
+..... .+........... +...+.. + ...+++++|||++++.++.+++.|++.+..+..+||
T Consensus 148 --~~~~~~------------~~~~~~~~~~~~~-~~~~~~~-~-~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~l~~ 210 (305)
T d2bmfa2 148 --FPQSNA------------PIMDEEREIPERS-WNSGHEW-V-TDFKGKTVWFVPSIKAGNDIAACLRKNGKKVIQLSR 210 (305)
T ss_dssp --SCCCSS------------CEEEEECCCCCSC-CSSCCHH-H-HSSCSCEEEECSCHHHHHHHHHHHHHHTCCCEECCT
T ss_pred --ecccCC------------cceEEEEeccHHH-HHHHHHH-H-HhhCCCEEEEeccHHHHHHHHHHHHhCCCCEEEeCC
Confidence 111100 0000000001000 0001111 1 224578999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCCCCCcEEEEc----------c----------CCCChhhHHHhhhhcc
Q 015129 312 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINY----------D----------LPTQPENYLHRIGRSG 371 (413)
Q Consensus 312 ~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~d~~~~~~vi~~----------~----------~~~s~~~~~Q~~GR~~ 371 (413)
++.... ...|++|..+++++|++++.|+|+ ++++||.. + .|.|..+|+||+||+|
T Consensus 211 ~~~~~~----~~~~~~~~~~~lvaT~~~~~G~~~-~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Qr~GR~G 285 (305)
T d2bmfa2 211 KTFDSE----YIKTRTNDWDFVVTTDISEMGANF-KAERVIDPRRCMKPVILTDGEERVILAGPMPVTHSSAAQRRGRVG 285 (305)
T ss_dssp TCHHHH----GGGGGTSCCSEEEECGGGGTTCCC-CCSEEEECCEEEEEEEECSSSCEEEEEEEEECCHHHHHHHHTTSS
T ss_pred cChHHH----HhhhhccchhhhhhhHHHHhcCCC-CccEEEEcCCceeeeEecCCCCceEEeccccCCHHHHhhhhcCcC
Confidence 986543 456789999999999999999999 45665532 2 3468889999999999
Q ss_pred CCCCcceEEEEecc
Q 015129 372 RFGRKGVAINFVTR 385 (413)
Q Consensus 372 R~g~~~~~~~~~~~ 385 (413)
|.|+.+....++..
T Consensus 286 R~~~~~~~~~~~~~ 299 (305)
T d2bmfa2 286 RNPKNENDQYIYMG 299 (305)
T ss_dssp CSSSCCCEEEEECS
T ss_pred cCCCCceEEEEECC
Confidence 99988766655554
No 11
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=5.9e-33 Score=221.41 Aligned_cols=161 Identities=68% Similarity=1.042 Sum_probs=150.6
Q ss_pred eEEEEEEeccccchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcE
Q 015129 253 IKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 332 (413)
Q Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~v 332 (413)
++|++..+...+.+++.|..+++....+++||||+++..++.+++.|...+..+..+||+++..+|..+++.|++|+.++
T Consensus 1 I~q~~~~v~~~e~K~~~L~~ll~~~~~~k~iIF~~s~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~l~~f~~~~~~i 80 (162)
T d1fuka_ 1 IKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRI 80 (162)
T ss_dssp CEEEEEEEESGGGHHHHHHHHHHHTTCSCEEEEESSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTSCSE
T ss_pred CEEEEEEeCCcHHHHHHHHHHHHhCCCCcEEEEEEEEchHHHHHHHHhhcCceEEEeccCCchhhHHHHHHHHhhcccce
Confidence 46788888777889999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCcEEEEccCCCChhhHHHhhhhccCCCCcceEEEEeccCcHHHHHHHHHHhccccccCCchhhhc
Q 015129 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 412 (413)
Q Consensus 333 li~t~~~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (413)
||||+++++|+|+|++++||++++|+++..|+||+||+||.|+.|.+++++++.|...++.+++.++..++++|+++.++
T Consensus 81 Lv~Tdv~~rGiDi~~v~~VI~~d~P~~~~~yihR~GR~gR~g~~g~~i~~~~~~d~~~~~~i~~~~~~~~~~ip~~~~~l 160 (162)
T d1fuka_ 81 LISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELPSDIATL 160 (162)
T ss_dssp EEEEGGGTTTCCCCSCSEEEESSCCSSGGGGGGSSCSCC-----CEEEEEEETTTHHHHHHHHHHSSCCCEECCSCCTTT
T ss_pred eeccccccccccCCCceEEEEeccchhHHHHHhhccccccCCCccEEEEEcCHHHHHHHHHHHHHHcCcCCCCChHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C
Q 015129 413 L 413 (413)
Q Consensus 413 ~ 413 (413)
|
T Consensus 161 ~ 161 (162)
T d1fuka_ 161 L 161 (162)
T ss_dssp T
T ss_pred h
Confidence 6
No 12
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=6.4e-33 Score=222.40 Aligned_cols=167 Identities=69% Similarity=1.147 Sum_probs=161.1
Q ss_pred cccccCeEEEEEEeccccchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHh
Q 015129 247 ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFR 326 (413)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~ 326 (413)
+.+.++++|++..++....+.+.|..+++.....++||||++++.++.+++.|+..+..+..+||+++..+|..+++.|+
T Consensus 2 ~~tl~~i~q~~v~v~~~~~K~~~L~~ll~~~~~~k~iiF~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~fk 81 (168)
T d2j0sa2 2 ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFR 81 (168)
T ss_dssp GCSCTTEEEEEEEESSTTHHHHHHHHHHHHHTSSEEEEECSSHHHHHHHHHHHHHTTCCCEEECTTSCHHHHHHHHHHHH
T ss_pred CCCCCCcEEEEEEecChHHHHHHHHHHHHhCCCCceEEEeeeHHHHHHHHHHhhhcccchhhhhhhhhHHHHHHHHHHHh
Confidence 45678999999999988889999999999988899999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEEcCCCCCCCCCCCCcEEEEccCCCChhhHHHhhhhccCCCCcceEEEEeccCcHHHHHHHHHHhccccccCC
Q 015129 327 SGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELP 406 (413)
Q Consensus 327 ~~~~~vli~t~~~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (413)
+|+.++||||+++++|+|+|++++||++++|+++..|+||+||+||.|+.|.+++++.+.|...++.+++.++...+++|
T Consensus 82 ~g~~~iLv~Td~~~rGiDi~~v~~VIn~d~P~~~~~yihR~GR~gR~g~~G~~i~~~~~~d~~~~~~i~~~~~~~i~e~p 161 (168)
T d2j0sa2 82 SGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMP 161 (168)
T ss_dssp HTSSCEEEECGGGSSSCCCTTEEEEEESSCCSSHHHHHHHHTTSSGGGCCEEEEEEEEGGGHHHHHHHHHHTTCCCEECC
T ss_pred cCCccEEeccchhcccccccCcceEEEecCCcCHHHHHhhhccccccCCCcEEEEEECHHHHHHHHHHHHHHcCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcC
Q 015129 407 SNVADLL 413 (413)
Q Consensus 407 ~~~~~~~ 413 (413)
.++.|++
T Consensus 162 ~~~~dii 168 (168)
T d2j0sa2 162 MNVADLI 168 (168)
T ss_dssp SCCTTTC
T ss_pred cChHHhC
Confidence 9999875
No 13
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97 E-value=2.8e-31 Score=214.38 Aligned_cols=164 Identities=41% Similarity=0.732 Sum_probs=156.4
Q ss_pred ccccCeEEEEEEeccccchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhc
Q 015129 248 LTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRS 327 (413)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~ 327 (413)
.+.+++.|+|..++. ..+...|.++++....+++||||++++.++.++..|...|..+..+||+++..+|..+++.|++
T Consensus 2 ~tl~~i~q~yi~v~~-~~K~~~L~~ll~~~~~~k~iVF~~~~~~~~~l~~~L~~~g~~~~~~h~~~~~~~r~~~~~~f~~ 80 (171)
T d1s2ma2 2 LTLKGITQYYAFVEE-RQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQ 80 (171)
T ss_dssp CBCTTEEEEEEECCG-GGHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHTCCEEEECTTSCHHHHHHHHHHHHT
T ss_pred CCccceEEEEEEcCH-HHHHHHHHHHHHhCCCCceEEEEeeeehhhHhHHhhhcccccccccccccchhhhhhhhhhccc
Confidence 467889999998876 5799999999999988999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEcCCCCCCCCCCCCcEEEEccCCCChhhHHHhhhhccCCCCcceEEEEeccCcHHHHHHHHHHhccccccCCc
Q 015129 328 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPS 407 (413)
Q Consensus 328 ~~~~vli~t~~~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (413)
|+.++||||+++++|+|+|++++||+|++|+++..|+||+||+||.|+.|.+++++.+.|...+..+++.++...+++|.
T Consensus 81 ~~~~ilv~Td~~~~Gid~~~v~~VI~~d~p~~~~~y~qr~GR~gR~g~~g~~i~~v~~~e~~~~~~i~~~l~~~~~~~p~ 160 (171)
T d1s2ma2 81 GKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYKIEQELGTEIAAIPA 160 (171)
T ss_dssp TSSSEEEESSCSSSSCCCTTEEEEEESSCCSSHHHHHHHHCBSSCTTCCEEEEEEECGGGHHHHHHHHHHHTCCCEECCS
T ss_pred CccccccchhHhhhccccceeEEEEecCCcchHHHHHHHhhhcccCCCccEEEEEeCHHHHHHHHHHHHHHCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhc
Q 015129 408 NVADL 412 (413)
Q Consensus 408 ~~~~~ 412 (413)
++.+.
T Consensus 161 ~~d~~ 165 (171)
T d1s2ma2 161 TIDKS 165 (171)
T ss_dssp SCCGG
T ss_pred ccchh
Confidence 87653
No 14
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=4.3e-30 Score=206.01 Aligned_cols=160 Identities=45% Similarity=0.815 Sum_probs=147.4
Q ss_pred cccCeEEEEEEeccccchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcC
Q 015129 249 TLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 328 (413)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~ 328 (413)
+.++++|++..++....+.+.+.++++....+++||||++++.++.++..|...|+.+..+||+++..+|..+++.|++|
T Consensus 2 tl~~ikq~y~~~~~~~~K~~~L~~ll~~~~~~~~lIF~~~~~~~~~l~~~l~~~~~~~~~~hg~~~~~~R~~~~~~F~~g 81 (168)
T d2rb4a1 2 TLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDG 81 (168)
T ss_dssp CBCCEEEEEEECSSHHHHHHHHHHHHTTSCCSEEEEECSCHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHTT
T ss_pred CccccEEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEcCHHHHHHHHHHHHHhcCCcceecccchhhHHHHHHhhhhcCC
Confidence 46789999998887788999999999988889999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCCCCCCCCCCcEEEEccCCCC------hhhHHHhhhhccCCCCcceEEEEeccCcHHHHHHHHHHhcccc
Q 015129 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQ------PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVI 402 (413)
Q Consensus 329 ~~~vli~t~~~~~G~d~~~~~~vi~~~~~~s------~~~~~Q~~GR~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (413)
+.++||||+++++|+|+|++++||+++.|++ ...|+||+||+||.|+.|.++.++++.|.+.+..+++.++..+
T Consensus 82 ~~~ilv~Td~~~~Gid~~~v~~Vi~yd~P~~~~~~~~~~~yihR~GR~gR~g~~g~~i~~~~~~d~~~l~~i~~~~~~~i 161 (168)
T d2rb4a1 82 KEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFNSSI 161 (168)
T ss_dssp SCSEEEECCSCCTTTCCTTEEEEEESSCCC--CCSCCHHHHHHHHCBC----CCEEEEEEECGGGHHHHHHHHHHHTCCC
T ss_pred ceeeeechhhhhhhhccccccEEEeecCCCcccccCCHHHHHHHhhhcccCCCceEEEEEEcHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999999999984 6789999999999999999999999999999999999999999
Q ss_pred ccCCch
Q 015129 403 EELPSN 408 (413)
Q Consensus 403 ~~~~~~ 408 (413)
++++.+
T Consensus 162 ~el~~~ 167 (168)
T d2rb4a1 162 KQLNAE 167 (168)
T ss_dssp EEECSS
T ss_pred CcCCCC
Confidence 998753
No 15
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=1.7e-29 Score=202.67 Aligned_cols=156 Identities=36% Similarity=0.676 Sum_probs=144.4
Q ss_pred eEEEEEEeccccchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcE
Q 015129 253 IKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 332 (413)
Q Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~v 332 (413)
++++|..+.. +.|.+.|.++++....+++||||++++.++.+++.|...|..+..+||+++..+|..+++.|++|+.++
T Consensus 2 l~q~~v~~~~-~~K~~~L~~ll~~~~~~k~iIF~~~~~~~~~l~~~L~~~~~~~~~ihg~~~~~~r~~~l~~F~~g~~~i 80 (168)
T d1t5ia_ 2 LQQYYVKLKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRI 80 (168)
T ss_dssp CEEEEEECCG-GGHHHHHHHHHHHSCCSSEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTSCSE
T ss_pred cEEEEEEeCh-HHHHHHHHHHHHhCCCCeEEEEEeeeecchhhhhhhccccccccccccccchhhhhhhhhhhcccccee
Confidence 5677777775 679999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCcEEEEccCCCChhhHHHhhhhccCCCCcceEEEEeccC-cHHHHHHHHHHhccccccCCchh
Q 015129 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD-DERMLFDIQKFYNVVIEELPSNV 409 (413)
Q Consensus 333 li~t~~~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 409 (413)
||||+++++|+|+|.+++||++++|+++..|+||+||+||.|+.|.+++++++. +...+..+++.++..++++|+++
T Consensus 81 Lv~T~~~~~Gid~~~~~~vi~~~~p~~~~~yiqr~GR~gR~g~~g~~i~l~~~~~~~~~~~~i~~~~~~~~~elp~~~ 158 (168)
T d1t5ia_ 81 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 158 (168)
T ss_dssp EEESSCCSTTCCGGGCSEEEESSCCSSHHHHHHHHHHHTGGGCCCEEEEEECSHHHHHHHHHHHHHHCCCEEECC---
T ss_pred eeccccccchhhcccchhhhhhhcccchhhHhhhhhhcccCCCccEEEEEECchHHHHHHHHHHHHHcCCcccCCchh
Confidence 999999999999999999999999999999999999999999999999999875 56788889999999999998775
No 16
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.96 E-value=2.4e-29 Score=199.65 Aligned_cols=153 Identities=38% Similarity=0.682 Sum_probs=144.4
Q ss_pred cCeEEEEEEeccccchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCC
Q 015129 251 EGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 330 (413)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~ 330 (413)
++++|.+..++. ..+.+.|.++++.. +.++||||++++.++.+++.|+..|..+..+|++++..+|..+++.|++|+.
T Consensus 2 ~nI~~~~i~v~~-~~K~~~L~~ll~~~-~~k~IIF~~s~~~~~~l~~~L~~~g~~~~~~~~~~~~~~r~~~~~~f~~~~~ 79 (155)
T d1hv8a2 2 ANIEQSYVEVNE-NERFEALCRLLKNK-EFYGLVFCKTKRDTKELASMLRDIGFKAGAIHGDLSQSQREKVIRLFKQKKI 79 (155)
T ss_dssp SSSEEEEEECCG-GGHHHHHHHHHCST-TCCEEEECSSHHHHHHHHHHHHHTTCCEEEECSSSCHHHHHHHHHHHHTTSS
T ss_pred CCeEEEEEEeCh-HHHHHHHHHHHccC-CCCEEEEECchHHHHHHHhhhcccccccccccccchhhhhhhhhhhhhcccc
Confidence 578899888866 57999999998764 4689999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCCCCCCCCCCcEEEEccCCCChhhHHHhhhhccCCCCcceEEEEeccCcHHHHHHHHHHhccccccC
Q 015129 331 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 405 (413)
Q Consensus 331 ~vli~t~~~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (413)
++||||+++++|+|+|++++||++++|+++..|+||+||+||.|+.|.+++++.+.|...++.+++.++..++++
T Consensus 80 ~ilv~T~~~~~Gid~~~v~~Vi~~d~p~~~~~y~qr~GR~gR~g~~g~~i~~~~~~d~~~~~~i~~~~~~~i~~l 154 (155)
T d1hv8a2 80 RILIATDVMSRGIDVNDLNCVINYHLPQNPESYMHRIGRTGRAGKKGKAISIINRREYKKLRYIERAMKLKIKKL 154 (155)
T ss_dssp SEEEECTTHHHHCCCSCCSEEEESSCCSCHHHHHHHSTTTCCSSSCCEEEEEECTTSHHHHHHHHHHHTCCCCCB
T ss_pred eeeeehhHHhhhhhhccCcEEEEecCCCCHHHHHHHHHhcCcCCCCceEEEEEchHHHHHHHHHHHHHCCCcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988776
No 17
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=99.95 E-value=3.6e-27 Score=193.69 Aligned_cols=143 Identities=22% Similarity=0.383 Sum_probs=129.8
Q ss_pred cccCeEEEEEEeccccchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcC
Q 015129 249 TLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 328 (413)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~ 328 (413)
..+|+...+. ....+++.|..+++...+.++||||++++.++.++..|...++.+..+||+++..+|..+++.|++|
T Consensus 3 ~RpNi~y~v~---~~~~k~~~L~~~l~~~~~~~~IIF~~t~~~~~~l~~~l~~~~~~~~~~h~~~~~~~r~~~~~~f~~g 79 (200)
T d1oywa3 3 DRPNIRYMLM---EKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRD 79 (200)
T ss_dssp CCTTEEEEEE---ECSSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTT
T ss_pred CCCCcEEEEE---cCCcHHHHHHHHHHhcCCCCEEEEEeeehhhHHhhhhhccCCceeEEecCCCcHHHHHHHHHHHhcc
Confidence 3456654433 2344788899999888888999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCCCCCCCCCCcEEEEccCCCChhhHHHhhhhccCCCCcceEEEEeccCcHHHHHHH
Q 015129 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 394 (413)
Q Consensus 329 ~~~vli~t~~~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~~~~~~~~~~~~~~~~~~~ 394 (413)
+.++||||+++++|+|+|++++||+++.|.++..|+||+||+||.|+.|.+++++.+.|...++.+
T Consensus 80 ~~~ilvaTd~~~~GiD~p~v~~VI~~~~P~~~~~y~qr~GR~gR~g~~g~ai~~~~~~d~~~l~~~ 145 (200)
T d1oywa3 80 DLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRC 145 (200)
T ss_dssp SCSEEEECTTSCTTTCCTTCCEEEESSCCSSHHHHHHHHTTSCTTSSCEEEEEEECHHHHHHHHHH
T ss_pred cceEEEecchhhhccCCCCCCEEEECCCccchHHHHHHhhhhhcCCCCceEEEecCHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999877776554
No 18
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.94 E-value=1.3e-27 Score=199.43 Aligned_cols=183 Identities=16% Similarity=0.216 Sum_probs=139.9
Q ss_pred CCHHHHHHHHHCCCCCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHH
Q 015129 47 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEK 126 (413)
Q Consensus 47 l~~~~~~~l~~~~~~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~ 126 (413)
+++.+...|++.|+.+|+|+|.++++.+.+|+++++++|||+|||++++++++..+.... ++++++|+++|+.|+.+
T Consensus 10 ~~~~~~~~l~~~g~~~l~~~Q~~ai~~l~~~~~~il~apTGsGKT~~a~l~i~~~~~~~~---~vl~l~P~~~L~~q~~~ 86 (202)
T d2p6ra3 10 ISSYAVGILKEEGIEELFPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREAIKGG---KSLYVVPLRALAGEKYE 86 (202)
T ss_dssp HHHHHHHHHHCC---CCCCCCHHHHHHHTTCSCEEEECSSHHHHHHHHHHHHHHHHHTTC---CEEEEESSHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCCchhHHHHHHHHHHhhccC---cceeecccHHHHHHHHH
Confidence 567888999999999999999999999999999999999999999999888887665443 89999999999999999
Q ss_pred HHHHhhcccCcEEEEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhccCcHHHHHHH
Q 015129 127 VMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDI 206 (413)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~~~~~~~~~ 206 (413)
.++++... ...+....++...... ....++++++||..+...+......+.++++||+||+|.+.+..+......+
T Consensus 87 ~~~~~~~~-~~~v~~~~~~~~~~~~---~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ii~DE~h~~~~~~r~~~~~~~ 162 (202)
T d2p6ra3 87 SFKKWEKI-GLRIGISTGDYESRDE---HLGDCDIIVTTSEKADSLIRNRASWIKAVSCLVVDEIHLLDSEKRGATLEIL 162 (202)
T ss_dssp HHTTTTTT-TCCEEEECSSCBCCSS---CSTTCSEEEEEHHHHHHHHHTTCSGGGGCCEEEETTGGGGGCTTTHHHHHHH
T ss_pred HHHHHhhc-cccceeeccCcccccc---cccccceeeeccHHHHHHHhccchhhhhhhhccccHHHHhcccccchHHHHH
Confidence 99887654 3445555554432211 1245789999999999888887777888999999999998876654433333
Q ss_pred ---HhhCCCCceEEEEEeeCCHhHHHHHHHhcCCC
Q 015129 207 ---FQLLPAKVQVGVFSATMPPEALEITRKFMNKP 238 (413)
Q Consensus 207 ---~~~~~~~~~~i~~SaT~~~~~~~~~~~~~~~~ 238 (413)
+...+++.|+++||||+++ ..+ +..+++..
T Consensus 163 l~~i~~~~~~~~~l~lSATl~n-~~~-~~~~l~~~ 195 (202)
T d2p6ra3 163 VTKMRRMNKALRVIGLSATAPN-VTE-IAEWLDAD 195 (202)
T ss_dssp HHHHHHHCTTCEEEEEECCCTT-HHH-HHHHTTCE
T ss_pred HHHHHhcCCCCcEEEEcCCCCc-HHH-HHHHcCCC
Confidence 3344568899999999854 334 34555433
No 19
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=99.94 E-value=2.1e-27 Score=198.85 Aligned_cols=188 Identities=15% Similarity=0.149 Sum_probs=139.5
Q ss_pred CcccCCCCHHHHHHHHHC-CCCCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHH
Q 015129 41 SFDAMGLQENLLRGIYAY-GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 119 (413)
Q Consensus 41 ~~~~~~l~~~~~~~l~~~-~~~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~ 119 (413)
..+.++|++.+...|++. |+.++||+|.++++.+.+|+|+++++|||||||+++.++++.. ..++++++|+++
T Consensus 3 ~~e~~~l~~~~~~~l~~~fg~~~~rp~Q~~ai~~~l~g~~vlv~apTGsGKT~~~~~~~~~~------~~~~~~v~P~~~ 76 (206)
T d1oywa2 3 QAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLL------NGLTVVVSPLIS 76 (206)
T ss_dssp CCCCSSHHHHHHHHHHHTTCCSSCCTTHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHS------SSEEEEECSCHH
T ss_pred chhhCCCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCCCCcchhhhhhhhc------cCceEEeccchh
Confidence 467789999999999875 9999999999999999999999999999999999998887653 238999999999
Q ss_pred HHHHHHHHHHHhhcccCcEEEEEEcCcch----HHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHh
Q 015129 120 LAQQIEKVMRALGDYLGVKVHACVGGTSV----REDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEML 195 (413)
Q Consensus 120 l~~q~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~ 195 (413)
|+.|+.+.++.+... .......... ...........+++++|++.+............+++++|+||+|.+.
T Consensus 77 L~~q~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~t~~~~~~~~~~~~~~~~~v~~lviDEaH~~~ 152 (206)
T d1oywa2 77 LMKDQVDQLQANGVA----AACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCIS 152 (206)
T ss_dssp HHHHHHHHHHHTTCC----EEEECTTSCHHHHHHHHHHHHHTCCSEEEECHHHHTSTTHHHHHTTSCEEEEEESSGGGGC
T ss_pred hhhhHHHHHHhhccc----ccccccccccccchhHHHHHhcCCceEEEEechhhhchhhcccchhheeeeeeeeeeeeee
Confidence 999999999887432 2222222221 12223345678999999988754444334456678999999999887
Q ss_pred ccCcH-----HHHHHHHhhCCCCceEEEEEeeCCHhHHHH-HHHh-cCCCE
Q 015129 196 SRGFK-----DQIYDIFQLLPAKVQVGVFSATMPPEALEI-TRKF-MNKPV 239 (413)
Q Consensus 196 ~~~~~-----~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~-~~~~-~~~~~ 239 (413)
+++.. ..+..+...++ +.|++++|||+++...+. .+.+ +.+|+
T Consensus 153 ~~~~~~~~~~~~~~~l~~~~~-~~~ii~lSATl~~~v~~di~~~L~l~~p~ 202 (206)
T d1oywa2 153 QWGHDFRPEYAALGQLRQRFP-TLPFMALTATADDTTRQDIVRLLGLNDPL 202 (206)
T ss_dssp TTSSCCCHHHHGGGGHHHHCT-TSCEEEEESCCCHHHHHHHHHHHTCCSCE
T ss_pred ccccchHHHHHHHHHHHHhCC-CCceEEEEeCCCHHHHHHHHHHcCCCCCc
Confidence 65432 12334445554 689999999999876554 4443 55664
No 20
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.93 E-value=2.1e-25 Score=185.96 Aligned_cols=164 Identities=20% Similarity=0.146 Sum_probs=130.2
Q ss_pred CCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEE
Q 015129 62 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHA 141 (413)
Q Consensus 62 ~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~ 141 (413)
+|+++|.++++.+. ++++++++|||+|||+++++++...+... +.+++|++|+++|+.|+.+.+.++....+..+..
T Consensus 9 ~pr~~Q~~~~~~~~-~~n~lv~~pTGsGKT~i~~~~~~~~~~~~--~~~il~i~P~~~L~~q~~~~~~~~~~~~~~~v~~ 85 (200)
T d1wp9a1 9 QPRIYQEVIYAKCK-ETNCLIVLPTGLGKTLIAMMIAEYRLTKY--GGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVA 85 (200)
T ss_dssp CCCHHHHHHHHHGG-GSCEEEECCTTSCHHHHHHHHHHHHHHHS--CSCEEEECSSHHHHHHHHHHHHHHBCSCGGGEEE
T ss_pred CCCHHHHHHHHHHh-cCCeEEEeCCCCcHHHHHHHHHHHHHHhc--CCcEEEEcCchHHHHHHHHHHHHhhcccccceee
Confidence 79999999998875 56799999999999999887776655433 2389999999999999999999998777788887
Q ss_pred EEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEEe
Q 015129 142 CVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSA 221 (413)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~Sa 221 (413)
..++........... .++++++||+.+...+........++++||+||||.+........+...........+++++||
T Consensus 86 ~~~~~~~~~~~~~~~-~~~i~i~t~~~~~~~~~~~~~~~~~~~~vIiDE~H~~~~~~~~~~~~~~~~~~~~~~~~l~~SA 164 (200)
T d1wp9a1 86 LTGEKSPEERSKAWA-RAKVIVATPQTIENDLLAGRISLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQAKNPLVIGLTA 164 (200)
T ss_dssp ECSCSCHHHHHHHHH-HCSEEEECHHHHHHHHHTTSCCTTSCSEEEEETGGGCSTTCHHHHHHHHHHHHCSSCCEEEEES
T ss_pred eecccchhHHHHhhh-cccccccccchhHHHHhhhhhhccccceEEEEehhhhhcchhHHHHHHHHHhcCCCCcEEEEEe
Confidence 777766655544433 4689999999999988888888889999999999988765544444444444455778999999
Q ss_pred eCCHhHHH
Q 015129 222 TMPPEALE 229 (413)
Q Consensus 222 T~~~~~~~ 229 (413)
||......
T Consensus 165 Tp~~~~~~ 172 (200)
T d1wp9a1 165 SPGSTPEK 172 (200)
T ss_dssp CSCSSHHH
T ss_pred cCCCcHHH
Confidence 99654433
No 21
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.93 E-value=1.9e-26 Score=197.28 Aligned_cols=177 Identities=19% Similarity=0.169 Sum_probs=127.4
Q ss_pred CcccCCCCHHHHHHHHHCCCCCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHH
Q 015129 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120 (413)
Q Consensus 41 ~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l 120 (413)
.|.+..+.+.+.+. .+.++.+|+++|..+++.+++|++++++||||+|||++++++++.....+ .+++|++|+++|
T Consensus 23 ~~~~~~~~~~~~~~-~~~~~~~p~~~Q~~~i~~~l~g~~~~i~apTGsGKT~~~~~~~~~~~~~~---~rvliv~Pt~~L 98 (237)
T d1gkub1 23 LFPEDFLLKEFVEF-FRKCVGEPRAIQKMWAKRILRKESFAATAPTGVGKTSFGLAMSLFLALKG---KRCYVIFPTSLL 98 (237)
T ss_dssp CCTTHHHHHHHHHH-HHTTTCSCCHHHHHHHHHHHTTCCEECCCCBTSCSHHHHHHHHHHHHTTS---CCEEEEESCHHH
T ss_pred cCccchhHHHHHHH-HHhccCCCCHHHHHHHHHHHCCCCEEEEecCCChHHHHHHHHHHHHHHhc---CeEEEEeccHHH
Confidence 33333334444443 44577799999999999999999999999999999999988887665543 499999999999
Q ss_pred HHHHHHHHHHhhcccCcE----EEEEEcCcchHHHHHHH--HcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHH
Q 015129 121 AQQIEKVMRALGDYLGVK----VHACVGGTSVREDQRIL--QAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEM 194 (413)
Q Consensus 121 ~~q~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~ 194 (413)
+.|+.++++++....++. +....++.......... ...++|+|+||+.+.+. ...+.++++||+||+|.+
T Consensus 99 a~Q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ilv~Tp~~l~~~----~~~~~~~~~vVvDE~d~~ 174 (237)
T d1gkub1 99 VIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLRNFKIVITTTQFLSKH----YRELGHFDFIFVDDVDAI 174 (237)
T ss_dssp HHHHHHHHHHHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSGGGCSEEEEEHHHHHHC----STTSCCCSEEEESCHHHH
T ss_pred HHHHHHHHHHHHHHcCCceEEEEeeeecccchhhhhhhhccccccceeccChHHHHHh----hhhcCCCCEEEEEChhhh
Confidence 999999999987766543 33334444433333332 24578999999987643 334567899999999998
Q ss_pred hccCcHHHHHHHHhh-------------CCCCceEEEEEeeCCHhH
Q 015129 195 LSRGFKDQIYDIFQL-------------LPAKVQVGVFSATMPPEA 227 (413)
Q Consensus 195 ~~~~~~~~~~~~~~~-------------~~~~~~~i~~SaT~~~~~ 227 (413)
.+.... +...... .+...|++++|||+++..
T Consensus 175 l~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~SAT~~~~~ 218 (237)
T d1gkub1 175 LKASKN--VDKLLHLLGFHYDLKTKSWVGEARGCLMVSTATAKKGK 218 (237)
T ss_dssp HTSTHH--HHHHHHHTTEEEETTTTEEEECCSSEEEECCCCSCCCT
T ss_pred hhcccc--hhHHHHhcCChHHHHHHHhhCCCCCeEEEEeCCCCccc
Confidence 765422 2222222 234678999999987543
No 22
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=99.92 E-value=2.2e-24 Score=170.08 Aligned_cols=114 Identities=26% Similarity=0.368 Sum_probs=103.0
Q ss_pred cccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCCCCCcEEEEccCC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 357 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~d~~~~~~vi~~~~~ 357 (413)
.++++||||++++.++.+++.|.+.|+.+..+||++++.+|.+++++|++|+++|||||+++++|+|+|++++||++++|
T Consensus 30 ~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~eR~~~l~~F~~G~~~vLVaT~v~~~GiDip~V~~Vi~~~~~ 109 (174)
T d1c4oa2 30 RGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLGHYDCLVGINLLREGLDIPEVSLVAILDAD 109 (174)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHHHHHHHHHHHTTSCSEEEESCCCCTTCCCTTEEEEEETTTT
T ss_pred cCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHHHHHHHHHHHCCCeEEEEeeeeeeeeccCCCCcEEEEeccc
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999977
Q ss_pred C-----ChhhHHHhhhhccCCCCcceEEEEeccCcHHHHH
Q 015129 358 T-----QPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 392 (413)
Q Consensus 358 ~-----s~~~~~Q~~GR~~R~g~~~~~~~~~~~~~~~~~~ 392 (413)
. +...|+|++||+||.|+ |.++++.........+
T Consensus 110 ~~~~~~~~~~~iq~~GR~gR~~~-g~~~~~~~~~~~~~~~ 148 (174)
T d1c4oa2 110 KEGFLRSERSLIQTIGRAARNAR-GEVWLYADRVSEAMQR 148 (174)
T ss_dssp SCSGGGSHHHHHHHHGGGTTSTT-CEEEEECSSCCHHHHH
T ss_pred cccccchhHHHHHHhhhhhhcCC-CeeEEeecCCCHHHHH
Confidence 5 45789999999999875 7777777665544433
No 23
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=99.91 E-value=1.4e-23 Score=168.55 Aligned_cols=108 Identities=26% Similarity=0.397 Sum_probs=98.4
Q ss_pred cccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCCCCCcEEEEccCC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 357 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~d~~~~~~vi~~~~~ 357 (413)
.+.++||||++++.++.++..|+..|+.+..+||++++.+|.++++.|++|+++|||||+++++|+|+|++++||+++.|
T Consensus 30 ~~~~~iif~~~~~~~~~~~~~l~~~g~~~~~~hg~~~~~eR~~~l~~Fr~g~~~vLVaTdv~~rGiDip~v~~VI~~d~p 109 (181)
T d1t5la2 30 RNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDAD 109 (181)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHHTSCSEEEESCCCSSSCCCTTEEEEEETTTT
T ss_pred cCCeEEEEeehhhhhHHHHHHHHhCCcceeEecCCccHHHHHHHHHHHHCCCCCEEEehhHHHccCCCCCCCEEEEecCC
Confidence 45699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-----ChhhHHHhhhhccCCCCcceEEEEeccC
Q 015129 358 T-----QPENYLHRIGRSGRFGRKGVAINFVTRD 386 (413)
Q Consensus 358 ~-----s~~~~~Q~~GR~~R~g~~~~~~~~~~~~ 386 (413)
. +..+|+||+||+||.|. |.+..++...
T Consensus 110 ~~~~~~s~~~yi~R~GRagR~g~-~~~~~~~~~~ 142 (181)
T d1t5la2 110 KEGFLRSERSLIQTIGRAARNAN-GHVIMYADTI 142 (181)
T ss_dssp SCSGGGSHHHHHHHHGGGTTSTT-CEEEEECSSC
T ss_pred cccccccHHHHHHHHHhhccccC-ceeEeecchh
Confidence 5 67899999999999986 4444444443
No 24
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.86 E-value=2.7e-20 Score=154.34 Aligned_cols=173 Identities=20% Similarity=0.230 Sum_probs=133.8
Q ss_pred CCCHHHHHHHH-HCCCCCCcHHHHhhhhhhhc----C--CcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcH
Q 015129 46 GLQENLLRGIY-AYGFEKPSAIQQRGIVPFCK----G--LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTR 118 (413)
Q Consensus 46 ~l~~~~~~~l~-~~~~~~~~~~Q~~~~~~i~~----~--~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~ 118 (413)
..+....+.+. .++| .+++-|..++..+.+ + .+.+++|.||||||.+|+.++...+..+. ++++++|+.
T Consensus 39 ~~~~~~~~~~~~~lP~-~lt~~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~~~g~---qv~~l~Pt~ 114 (233)
T d2eyqa3 39 KHDREQYQLFCDSFPF-ETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHK---QVAVLVPTT 114 (233)
T ss_dssp CCCHHHHHHHHHTCCS-CCCHHHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHHTTTC---EEEEECSSH
T ss_pred CCCHHHHHhhhhcccc-ccchhHHHHHHHHHHHHhccCccCeEEEcCCCCCcHHHHHHHHHHHHHcCC---ceEEEccHH
Confidence 44455555554 4555 899999999988764 3 36899999999999999999988887666 999999999
Q ss_pred HHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHH----HHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHH
Q 015129 119 ELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR----ILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEM 194 (413)
Q Consensus 119 ~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~ 194 (413)
.|+.|+++.++++....+.++..+++......... ......+|+|+|..-+. ....+.++++||+||-|++
T Consensus 115 ~La~Q~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~~~iviGths~l~-----~~~~f~~LgLiIiDEeH~f 189 (233)
T d2eyqa3 115 LLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQ-----SDVKFKDLGLLIVDEEHRF 189 (233)
T ss_dssp HHHHHHHHHHHHHSTTTTCCEEEESTTSCHHHHHHHHHHHHTTCCSEEEECTHHHH-----SCCCCSSEEEEEEESGGGS
T ss_pred HhHHHHHHHHHHHHhhCCCEEEeccCcccchhHHHHHHHHhCCCCCEEEeehhhhc-----cCCccccccceeeechhhh
Confidence 99999999999998888999999998887655433 34457899999976554 4566788999999999985
Q ss_pred hccCcHHHHHHHHhhCCCCceEEEEEeeCCHhHHHHHH
Q 015129 195 LSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITR 232 (413)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~~ 232 (413)
.-. +-..+.. ...++.++.+||||.++......
T Consensus 190 g~k----Q~~~l~~-~~~~~~~l~~SATPiprtl~~~~ 222 (233)
T d2eyqa3 190 GVR----HKERIKA-MRANVDILTLTATPIPRTLNMAM 222 (233)
T ss_dssp CHH----HHHHHHH-HHTTSEEEEEESSCCCHHHHHHH
T ss_pred hhH----HHHHHHh-hCCCCCEEEEecchhHHHHHHHH
Confidence 322 2222322 23467899999999998766544
No 25
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.85 E-value=5.7e-21 Score=161.55 Aligned_cols=169 Identities=21% Similarity=0.252 Sum_probs=131.7
Q ss_pred HHHHHHHHHCCCCCCcHHHHhhhhhhhc----C--CcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHH
Q 015129 49 ENLLRGIYAYGFEKPSAIQQRGIVPFCK----G--LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQ 122 (413)
Q Consensus 49 ~~~~~~l~~~~~~~~~~~Q~~~~~~i~~----~--~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~ 122 (413)
+...+.++.+.| .+|.-|.+++..+.+ + .+.++.|.||||||.+|+.++...+..+. ++++++||..|+.
T Consensus 71 ~l~~~f~~~LPF-eLT~~Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~~~g~---q~~~m~Pt~~La~ 146 (264)
T d1gm5a3 71 KLAEEFIKSLPF-KLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGF---QTAFMVPTSILAI 146 (264)
T ss_dssp HHHHHHHHHSSS-CCCHHHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHHHHTS---CEEEECSCHHHHH
T ss_pred HHHHHHHhhccc-cCCchHHHHHHHHHHHhhccCcceeeeeccccccccHHHHHHHHHHHhccc---ceeEEeehHhhhH
Confidence 344455567788 899999999999864 2 36799999999999999999998888776 9999999999999
Q ss_pred HHHHHHHHhhcccCcEEEEEEcCcchHHHHHH----HHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhccC
Q 015129 123 QIEKVMRALGDYLGVKVHACVGGTSVREDQRI----LQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG 198 (413)
Q Consensus 123 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~ 198 (413)
|.++.+.++....+..+..++|+....+.... .++..+|+|+|+.-+. ....+.++++||+||-|++.-..
T Consensus 147 Qh~~~~~~~f~~~~~~v~~l~~~~~~~~r~~~~~~~~~g~~~iiIGThsl~~-----~~~~f~~LglviiDEqH~fgv~Q 221 (264)
T d1gm5a3 147 QHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQ-----EDVHFKNLGLVIIDEQHRFGVKQ 221 (264)
T ss_dssp HHHHHHHHHHTCSSCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHH-----HCCCCSCCCEEEEESCCCC----
T ss_pred HHHHHHHHhhhhccccceeeccccchHHHHHHHHHHHCCCCCEEEeehHHhc-----CCCCccccceeeeccccccchhh
Confidence 99999999998889999999998886654433 3457899999986554 34556778999999999875333
Q ss_pred cHHHHHHHHhhCCCCceEEEEEeeCCHhHHHHH
Q 015129 199 FKDQIYDIFQLLPAKVQVGVFSATMPPEALEIT 231 (413)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~ 231 (413)
. ..+.....++.++.|||||.++...+.
T Consensus 222 r-----~~l~~~~~~~~~l~~SATPiprtl~~~ 249 (264)
T d1gm5a3 222 R-----EALMNKGKMVDTLVMSATPIPRSMALA 249 (264)
T ss_dssp ------CCCCSSSSCCCEEEEESSCCCHHHHHH
T ss_pred H-----HHHHHhCcCCCEEEEECCCCHHHHHHH
Confidence 1 112222346779999999998876554
No 26
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.85 E-value=8.4e-22 Score=150.65 Aligned_cols=104 Identities=25% Similarity=0.413 Sum_probs=92.7
Q ss_pred HHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCCCCCcEEEE
Q 015129 274 YETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN 353 (413)
Q Consensus 274 ~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~d~~~~~~vi~ 353 (413)
++....+++||||++++.++.+++.|+..|..+..+|++++.+ .|++|+.++||||+++++|+| +++++||+
T Consensus 30 l~~~~~~k~IVFc~t~~~ae~la~~L~~~G~~~~~~H~~~~~~-------~~~~~~~~vlvaTd~~~~GiD-~~v~~Vi~ 101 (138)
T d1jr6a_ 30 LEVIKGGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDVS-------VIPTNGDVVVVATDALMTGFT-GDFDSVID 101 (138)
T ss_dssp HHHHTTSCEEEECSCHHHHHHHHHHHHHHTCEEEEECTTCCSC-------CCTTSSCEEEEESSSSCSSSC-CCBSEEEE
T ss_pred HhhcCCCCEEEEeCcHHHHHHHHHHHhccccchhhhhccchhh-------hhhhhhcceeehhHHHHhccc-cccceEEE
Confidence 3455678999999999999999999999999999999999854 468899999999999999999 99999998
Q ss_pred c----cCCCChhhHHHhhhhccCCCCcceEEEEeccCc
Q 015129 354 Y----DLPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 387 (413)
Q Consensus 354 ~----~~~~s~~~~~Q~~GR~~R~g~~~~~~~~~~~~~ 387 (413)
+ ++|.+...|+||+||+|| |++|. ++++.+.+
T Consensus 102 ~~~~~~~P~~~~~y~qr~GR~gR-g~~G~-~~~i~~~e 137 (138)
T d1jr6a_ 102 CNTSDGKPQDAVSRTQRRGRTGR-GKPGI-YRFVAPGE 137 (138)
T ss_dssp CSEETTEECCHHHHHHHHTTBCS-SSCEE-EEECCSSC
T ss_pred EEecCCCCCCHHHHHhHhccccC-CCCcE-EEEEcCCC
Confidence 5 469999999999999999 99995 66777754
No 27
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=99.85 E-value=5.3e-22 Score=172.38 Aligned_cols=153 Identities=17% Similarity=0.114 Sum_probs=113.5
Q ss_pred CCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEE
Q 015129 62 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHA 141 (413)
Q Consensus 62 ~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~ 141 (413)
.||++|.+++..++++++.++.+|||+|||+++...+....... ..++||+||+++|+.||.+.+.++.......+..
T Consensus 113 ~~rdyQ~~av~~~l~~~~~il~~pTGsGKT~i~~~i~~~~~~~~--~~k~Liivp~~~Lv~Q~~~~f~~~~~~~~~~~~~ 190 (282)
T d1rifa_ 113 EPHWYQKDAVFEGLVNRRRILNLPTSAGRSLIQALLARYYLENY--EGKILIIVPTTALTTQMADDFVDYRLFSHAMIKK 190 (282)
T ss_dssp CCCHHHHHHHHHHHHHSEEEECCCTTSCHHHHHHHHHHHHHHHC--SSEEEEECSSHHHHHHHHHHHHHHTSCCGGGEEE
T ss_pred ccchHHHHHHHHHHhcCCceeEEEcccCccHHHHHHHHHhhhcc--cceEEEEEcCchhHHHHHHHHHHhhcccccccee
Confidence 79999999999999999999999999999998765554333322 2389999999999999999999986544444555
Q ss_pred EEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEEe
Q 015129 142 CVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSA 221 (413)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~Sa 221 (413)
..++...... .....+++|+|++++.+... ..++++++||+||||++. ...+..++..+.+....+++||
T Consensus 191 ~~~g~~~~~~---~~~~~~i~i~t~qs~~~~~~---~~~~~f~~VIvDEaH~~~----a~~~~~il~~~~~~~~rlGlTa 260 (282)
T d1rifa_ 191 IGGGASKDDK---YKNDAPVVVGTWQTVVKQPK---EWFSQFGMMMNDECHLAT----GKSISSIISGLNNCMFKFGLSG 260 (282)
T ss_dssp CSTTCSSTTC---CCTTCSEEEECHHHHTTSCG---GGGGGEEEEEEETGGGCC----HHHHHHHTTTCTTCCEEEEECS
T ss_pred ecceeccccc---ccccceEEEEeeehhhhhcc---cccCCCCEEEEECCCCCC----chhHHHHHHhccCCCeEEEEEe
Confidence 5444332211 11346899999988754332 245679999999999863 4566777777765556799999
Q ss_pred eCCHh
Q 015129 222 TMPPE 226 (413)
Q Consensus 222 T~~~~ 226 (413)
||+..
T Consensus 261 T~~~~ 265 (282)
T d1rifa_ 261 SLRDG 265 (282)
T ss_dssp SCCTT
T ss_pred ecCCC
Confidence 98653
No 28
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.83 E-value=1.6e-20 Score=155.95 Aligned_cols=137 Identities=17% Similarity=0.179 Sum_probs=102.4
Q ss_pred CCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEE
Q 015129 62 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHA 141 (413)
Q Consensus 62 ~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~ 141 (413)
+|+++|.+++..+.++++.++.+|||+|||++++..+... +.++||+||+++|+.||.+.++.+... .+..
T Consensus 70 ~Lr~yQ~eav~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~------~~~~Liv~p~~~L~~q~~~~~~~~~~~---~~~~ 140 (206)
T d2fz4a1 70 SLRDYQEKALERWLVDKRGCIVLPTGSGKTHVAMAAINEL------STPTLIVVPTLALAEQWKERLGIFGEE---YVGE 140 (206)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEESSSTTHHHHHHHHHHHS------CSCEEEEESSHHHHHHHHHHHGGGCGG---GEEE
T ss_pred CcCHHHHHHHHHHHhCCCcEEEeCCCCCceehHHhHHHHh------cCceeEEEcccchHHHHHHHHHhhccc---chhh
Confidence 7999999999999999999999999999999876554332 238999999999999999999887532 2333
Q ss_pred EEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEEe
Q 015129 142 CVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSA 221 (413)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~Sa 221 (413)
..|+.. ...+++|+|++.+...... ...++++||+||||++.+..+ ..+...++ ...++++||
T Consensus 141 ~~~~~~---------~~~~i~i~t~~~~~~~~~~---~~~~~~lvIiDEaH~~~a~~~----~~i~~~~~-~~~~lgLTA 203 (206)
T d2fz4a1 141 FSGRIK---------ELKPLTVSTYDSAYVNAEK---LGNRFMLLIFDEVHHLPAESY----VQIAQMSI-APFRLGLTA 203 (206)
T ss_dssp ESSSCB---------CCCSEEEEEHHHHHHTHHH---HTTTCSEEEEECSSCCCTTTH----HHHHHTCC-CSEEEEEEE
T ss_pred cccccc---------cccccccceehhhhhhhHh---hCCcCCEEEEECCeeCCcHHH----HHHHhccC-CCcEEEEec
Confidence 333322 2457999999988665443 124578999999999854443 34555553 456789999
Q ss_pred eCC
Q 015129 222 TMP 224 (413)
Q Consensus 222 T~~ 224 (413)
|+.
T Consensus 204 Tl~ 206 (206)
T d2fz4a1 204 TFE 206 (206)
T ss_dssp SCC
T ss_pred CCC
Confidence 973
No 29
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.82 E-value=2.3e-20 Score=163.68 Aligned_cols=118 Identities=22% Similarity=0.387 Sum_probs=103.4
Q ss_pred HHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecC--------CCCHHHHHHHHHHHhcCCCcEEEEcCCCCCC
Q 015129 271 CDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG--------DMDQNTRDIIMREFRSGSSRVLITTDLLARG 342 (413)
Q Consensus 271 ~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~--------~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G 342 (413)
.+++....+.++||||++...++.+++.|...+..+..++| +++..+|..+++.|++|+++|||||+++++|
T Consensus 153 ~~~~~~~~~~k~iiF~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~~g~~~vLv~T~~~~~G 232 (286)
T d1wp9a2 153 REQLQRKQNSKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASKENDRGLSQREQKLILDEFARGEFNVLVATSVGEEG 232 (286)
T ss_dssp HHHHHHCTTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECCSSCC-------CCHHHHHHHHHHHTSCSEEEECGGGGGG
T ss_pred HHHHHhCCCCcEEEEeCcHHhHHHHHHHHHHcCCceEEeeccccccccchhchHHHHHHHHHHHcCCCcEEEEccceecc
Confidence 34444556779999999999999999999999999888876 4566689999999999999999999999999
Q ss_pred CCCCCCcEEEEccCCCChhhHHHhhhhccCCCCcceEEEEeccCcHH
Q 015129 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 389 (413)
Q Consensus 343 ~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~~~~~~~~~~~~~~ 389 (413)
+|+|++++||+|++|+++..|+||+||+||.+ .|.+++++++...+
T Consensus 233 ld~~~~~~Vi~~d~~~~~~~~~Qr~GR~gR~~-~~~~~~l~~~~~~e 278 (286)
T d1wp9a2 233 LDVPEVDLVVFYEPVPSAIRSIQRRGRTGRHM-PGRVIILMAKGTRD 278 (286)
T ss_dssp GGSTTCCEEEESSCCHHHHHHHHHHTTSCSCC-CSEEEEEEETTSHH
T ss_pred ccCCCCCEEEEeCCCCCHHHHHHHHHhCCCCC-CCEEEEEEeCCCHH
Confidence 99999999999999999999999999999975 68899999887543
No 30
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.81 E-value=9.3e-20 Score=149.68 Aligned_cols=122 Identities=23% Similarity=0.370 Sum_probs=101.5
Q ss_pred hHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhC------------------------------CCeeEEecCCCCH
Q 015129 266 KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSR------------------------------DHTVSATHGDMDQ 315 (413)
Q Consensus 266 ~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~------------------------------~~~~~~~~~~~~~ 315 (413)
..+.+.+.++. ++++||||+|++.++.++..|... ...++++|++|++
T Consensus 29 ~~~l~~~~i~~--~~~~LVF~~sRk~~~~~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~GIa~hh~~l~~ 106 (201)
T d2p6ra4 29 FEELVEECVAE--NGGVLVFESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLN 106 (201)
T ss_dssp HHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHHHHHHHTTCCCSSHHHHHHTTCCSHHHHHHHHHHHTTCCEECTTSCH
T ss_pred HHHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhhhhhHHHHHHHhccHHHHHHHhhh
Confidence 34555555554 568999999999998887777541 1347899999999
Q ss_pred HHHHHHHHHHhcCCCcEEEEcCCCCCCCCCCCCcEEEE-------ccCCCChhhHHHhhhhccCCCC--cceEEEEeccC
Q 015129 316 NTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN-------YDLPTQPENYLHRIGRSGRFGR--KGVAINFVTRD 386 (413)
Q Consensus 316 ~~r~~~~~~f~~~~~~vli~t~~~~~G~d~~~~~~vi~-------~~~~~s~~~~~Q~~GR~~R~g~--~~~~~~~~~~~ 386 (413)
.+|..+++.|++|.++|||||+++++|+|+|..++||. .+.|.+..+|.||+||+||.|. .|.++++..+.
T Consensus 107 ~~r~~ie~~f~~g~i~vlvaT~~l~~Gin~p~~~vvi~~~~~~d~~~~~~~~~~~~q~~GRAGR~g~~~~G~~~l~~~~~ 186 (201)
T d2p6ra4 107 GQRRVVEDAFRRGNIKVVVATPTLAAGVNLPARRVIVRSLYRFDGYSKRIKVSEYKQMAGRAGRPGMDERGEAIIIVGKR 186 (201)
T ss_dssp HHHHHHHHHHHTTSCCEEEECSTTTSSSCCCBSEEEECCSEEESSSEEECCHHHHHHHHTTBSCTTTCSCEEEEEECCGG
T ss_pred hhHHHHHHHHhCCCceEEEechHHHhhcCCCCceEEEecceeccCCcCCCCHHHHHHHhcccCCCCCCCeeEEEEEeCCC
Confidence 99999999999999999999999999999998888886 5667899999999999999985 58888877776
Q ss_pred cHH
Q 015129 387 DER 389 (413)
Q Consensus 387 ~~~ 389 (413)
+..
T Consensus 187 ~~~ 189 (201)
T d2p6ra4 187 DRE 189 (201)
T ss_dssp GHH
T ss_pred ChH
Confidence 544
No 31
>d2fwra1 c.37.1.19 (A:257-456) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.81 E-value=2e-20 Score=154.76 Aligned_cols=117 Identities=21% Similarity=0.383 Sum_probs=104.3
Q ss_pred cchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcCCCCCCC
Q 015129 264 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 343 (413)
Q Consensus 264 ~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~ 343 (413)
..+++.+.++++...+.++||||++...++.+.+.|. +..+||+++..+|.++++.|++|+++||++|+++++|+
T Consensus 78 ~~K~~~l~~ll~~~~~~k~lvf~~~~~~~~~l~~~l~-----~~~i~g~~~~~~R~~~l~~F~~~~~~vLv~~~~~~~Gi 152 (200)
T d2fwra1 78 KNKIRKLREILERHRKDKIIIFTRHNELVYRISKVFL-----IPAITHRTSREEREEILEGFRTGRFRAIVSSQVLDEGI 152 (200)
T ss_dssp SHHHHHHHHHHHHTSSSCBCCBCSCHHHHHHHHHHTT-----CCBCCSSSCSHHHHTHHHHHHHSSCSBCBCSSCCCSSS
T ss_pred HHHHHHHHHHHHhCCCCcEEEEeCcHHHHHHHHhhcC-----cceeeCCCCHHHHHHHHHHhhcCCeeeeeecchhhccc
Confidence 3478889999999888899999999999999998873 45679999999999999999999999999999999999
Q ss_pred CCCCCcEEEEccCCCChhhHHHhhhhccCCCCcc---eEEEEecc
Q 015129 344 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKG---VAINFVTR 385 (413)
Q Consensus 344 d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~~---~~~~~~~~ 385 (413)
|+|.+++||++++|+++..|+|++||++|.|+.+ .++.++.+
T Consensus 153 dl~~~~~vi~~~~~~s~~~~~Q~iGR~~R~~~~k~~~~i~~~v~~ 197 (200)
T d2fwra1 153 DVPDANVGVIMSGSGSAREYIQRLGRILRPSKGKKEAVLYELISR 197 (200)
T ss_dssp CSCCBSEEEEECCSSCCHHHHHHHHHSBCCCTTTCCEEEEEEEEC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCCcEEEEEEEecC
Confidence 9999999999999999999999999999998743 34445443
No 32
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=99.77 E-value=1.3e-19 Score=141.28 Aligned_cols=136 Identities=20% Similarity=0.214 Sum_probs=90.2
Q ss_pred hhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHH
Q 015129 74 FCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 153 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (413)
+.+|+++++.+|||+|||.+++..++...... +.++++++|++.++.|+.+.+... +..+.........
T Consensus 4 l~~~~~~il~~~tGsGKT~~~~~~~~~~~~~~--~~~vli~~p~~~l~~q~~~~~~~~----~~~~~~~~~~~~~----- 72 (140)
T d1yksa1 4 LKKGMTTVLDFHPGAGKTRRFLPQILAECARR--RLRTLVLAPTRVVLSEMKEAFHGL----DVKFHTQAFSAHG----- 72 (140)
T ss_dssp TSTTCEEEECCCTTSSTTTTHHHHHHHHHHHT--TCCEEEEESSHHHHHHHHHHTTTS----CEEEESSCCCCCC-----
T ss_pred HHcCCcEEEEcCCCCChhHHHHHHHHHHhhhc--CceeeeeecchhHHHHHHHHhhhh----hhhhccccccccc-----
Confidence 45689999999999999988876666555433 349999999999999988776543 2222211111110
Q ss_pred HHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhccCcH-HHHHHHHhhCCCCceEEEEEeeCC
Q 015129 154 ILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFK-DQIYDIFQLLPAKVQVGVFSATMP 224 (413)
Q Consensus 154 ~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~~~-~~~~~~~~~~~~~~~~i~~SaT~~ 224 (413)
.....+.++|...+..... ....+.++++||+||||++....+. ..+...... .++.++++||||||
T Consensus 73 --~~~~~~~~~~~~~l~~~~~-~~~~~~~~~lvIiDEaH~~~~~~~~~~~~~~~~~~-~~~~~~l~lTATPp 140 (140)
T d1yksa1 73 --SGREVIDAMCHATLTYRML-EPTRVVNWEVIIMDEAHFLDPASIAARGWAAHRAR-ANESATILMTATPP 140 (140)
T ss_dssp --CSSCCEEEEEHHHHHHHHT-SSSCCCCCSEEEETTTTCCSHHHHHHHHHHHHHHH-TTSCEEEEECSSCT
T ss_pred --ccccchhhhhHHHHHHHHh-ccccccceeEEEEccccccChhhHHHHHHHHHHhh-CCCCCEEEEEcCCC
Confidence 1235677778777765443 4556778999999999986433322 122222333 35789999999996
No 33
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.76 E-value=2.6e-19 Score=145.62 Aligned_cols=131 Identities=18% Similarity=0.287 Sum_probs=102.0
Q ss_pred hHHHHHHHHHhh--cccceEEEEccHHHHH--------HHHHHhhhC---CCeeEEecCCCCHHHHHHHHHHHhcCCCcE
Q 015129 266 KLETLCDLYETL--AITQSVIFVNTRRKVD--------WLTDKMRSR---DHTVSATHGDMDQNTRDIIMREFRSGSSRV 332 (413)
Q Consensus 266 ~~~~l~~~~~~~--~~~~~lif~~~~~~~~--------~l~~~L~~~---~~~~~~~~~~~~~~~r~~~~~~f~~~~~~v 332 (413)
+.+.+.+.++.. .++++.++||..+..+ ...+.|.+. +..+..+||.|+++++++++++|.+|+++|
T Consensus 14 ~~~~v~~~I~~el~~g~QvyvVcP~Ieese~~~~~~~~e~~~~l~~~~~p~~~v~~lHG~m~~~eke~~m~~F~~g~~~i 93 (206)
T d1gm5a4 14 RVNEVYEFVRQEVMRGGQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKLGLMHGRLSQEEKDRVMLEFAEGRYDI 93 (206)
T ss_dssp THHHHHHHHHHHTTTSCCBCCBCCCC--------CHHHHHHHSGGGSCC---CBCCCCSSSCCSCSHHHHHHHTTTSSSB
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEeeecccccccchhhHHHHHHHHHhcCCCCeEEEEeecccHHHHHHHHHHHHCCCEEE
Confidence 444455544432 5568888898765443 333444332 567889999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCcEEEEccCCC-ChhhHHHhhhhccCCCCcceEEEEeccCcHHHHHHHHH
Q 015129 333 LITTDLLARGIDVQQVSLVINYDLPT-QPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 396 (413)
Q Consensus 333 li~t~~~~~G~d~~~~~~vi~~~~~~-s~~~~~Q~~GR~~R~g~~~~~~~~~~~~~~~~~~~~~~ 396 (413)
||||++++.|+|+|++++||+++.|. ..+++-|..||+||.|..|.|++++.+.+....+.+..
T Consensus 94 LVaTtViE~GIDip~a~~iii~~a~~fglsqlhQlrGRvGR~~~~~~~~l~~~~~~~~~~~rl~~ 158 (206)
T d1gm5a4 94 LVSTTVIEVGIDVPRANVMVIENPERFGLAQLHQLRGRVGRGGQEAYCFLVVGDVGEEAMERLRF 158 (206)
T ss_dssp CCCSSCCCSCSCCTTCCEEEBCSCSSSCTTHHHHHHHTSCCSSTTCEEECCCCSCCHHHHHHHHH
T ss_pred EEEehhhhccccccCCcEEEEEccCCccHHHHHhhhhheeeccccceeEeeeccccccchhhhhh
Confidence 99999999999999999999999886 78888999999999999999999998876666555543
No 34
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.73 E-value=3.3e-17 Score=131.57 Aligned_cols=109 Identities=17% Similarity=0.253 Sum_probs=100.3
Q ss_pred cccceEEEEccHHHHHHHHHHhhhC--CCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCCCCCcEEEEcc
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRSR--DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD 355 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~d~~~~~~vi~~~ 355 (413)
.++++.++||..+..+.+.+.+++. +..+..+||.|+..++++++..|.+|+++|||||.+++.|+|+|+++++|+.+
T Consensus 30 rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~~~eke~im~~F~~g~~~ILv~TtvIEvGiDvpnA~~iiI~~ 109 (211)
T d2eyqa5 30 RGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIER 109 (211)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCHHHHHHHHHHHHTTSCCEEEESSTTGGGSCCTTEEEEEETT
T ss_pred cCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccCHHHHHHHHHHHHcCCcceEEEehhhhhccCCCCCcEEEEec
Confidence 5679999999999999888888764 67899999999999999999999999999999999999999999999999988
Q ss_pred CC-CChhhHHHhhhhccCCCCcceEEEEeccC
Q 015129 356 LP-TQPENYLHRIGRSGRFGRKGVAINFVTRD 386 (413)
Q Consensus 356 ~~-~s~~~~~Q~~GR~~R~g~~~~~~~~~~~~ 386 (413)
.. +..+++-|..||+||.+..+.|+.++...
T Consensus 110 a~rfGLaQLhQLRGRVGR~~~~s~c~l~~~~~ 141 (211)
T d2eyqa5 110 ADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHP 141 (211)
T ss_dssp TTSSCHHHHHHHHTTCCBTTBCEEEEEEECCG
T ss_pred chhccccccccccceeeecCccceEEEEecCC
Confidence 76 48899999999999999999999998653
No 35
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.73 E-value=4.9e-18 Score=131.21 Aligned_cols=127 Identities=15% Similarity=0.097 Sum_probs=86.0
Q ss_pred CCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHH
Q 015129 77 GLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
.+..++.+|||||||+++...+. ..+.+++|++|++.|++|+.+.+.+.... ......++....
T Consensus 8 ~~~~ll~apTGsGKT~~~~~~~~------~~~~~vli~~P~~~l~~q~~~~~~~~~~~---~~~~~~~~~~~~------- 71 (136)
T d1a1va1 8 FQVAHLHAPTGSGKSTKVPAAYA------AQGYKVLVLNPSVAATLGFGAYMSKAHGV---DPNIRTGVRTIT------- 71 (136)
T ss_dssp CEEEEEECCTTSCTTTHHHHHHH------TTTCCEEEEESCHHHHHHHHHHHHHHHSC---CCEEECSSCEEC-------
T ss_pred CCEEEEEeCCCCCHHHHHHHHHH------HcCCcEEEEcChHHHHHHHHHHHHHHhhc---cccccccccccc-------
Confidence 46779999999999987543332 22349999999999999999999886532 222223322211
Q ss_pred cCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhccCcHHHHHHHHhhCC--CCceEEEEEeeC
Q 015129 157 AGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLP--AKVQVGVFSATM 223 (413)
Q Consensus 157 ~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~--~~~~~i~~SaT~ 223 (413)
....+.++|.+.+.... ...+.++++||+||+|++.... ...+..++..+. ...+++++||||
T Consensus 72 ~~~~~~~~~~~~~~~~~---~~~~~~~~~vIiDE~H~~~~~~-~~~~~~~l~~~~~~~~~~~l~~TATP 136 (136)
T d1a1va1 72 TGSPITYSTYGKFLADG---GCSGGAYDIIICDECHSTDATS-ILGIGTVLDQAETAGARLVVLATATP 136 (136)
T ss_dssp CCCSEEEEEHHHHHHTT---GGGGCCCSEEEEETTTCCSHHH-HHHHHHHHHHTTTTTCSEEEEEESSC
T ss_pred cccceEEEeeeeecccc---chhhhcCCEEEEecccccCHHH-HHHHHHHHHHHHHCCCCcEEEEeCCC
Confidence 23568889988765433 3346678999999999864332 233445555443 466899999997
No 36
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.71 E-value=1.4e-18 Score=145.95 Aligned_cols=107 Identities=18% Similarity=0.216 Sum_probs=93.4
Q ss_pred cccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHH----------HHHHHHHhcCCCcEEEEcCCCCC---CCC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTR----------DIIMREFRSGSSRVLITTDLLAR---GID 344 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r----------~~~~~~f~~~~~~vli~t~~~~~---G~d 344 (413)
.++++||||++++.++.+++.|++.|+++..+|++++.+.| ..+++.|.+|+.+++|+|++..+ |+|
T Consensus 35 kggk~LVFcnSR~~aE~La~~L~~~Gi~a~~~Hgglsq~~R~~~gd~~i~~~~aLe~f~~G~~dvVVaT~~~a~g~~giD 114 (299)
T d1a1va2 35 KGGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDVSVIPTSGDVVVVATDALMTGFTGDFDSVIDCNTCVTQTVDFS 114 (299)
T ss_dssp HSSEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCGGGSCSSSSEEEEECTTC---CCCCBSEEEECCEEEEEEEECC
T ss_pred cCCCEEEECCcHHHHHHHHHHHHHCCCCEEEEeCCchHHHHHhccchHHHHHHHHHHHhcCCCcEEEEEeehhccCCCCC
Confidence 46799999999999999999999999999999999998876 45788899999999999998877 778
Q ss_pred CCCCcEEEEccCCCChhhHHHhhhhccCCCCcceEEEEecc
Q 015129 345 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR 385 (413)
Q Consensus 345 ~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~~~~~~~~~~ 385 (413)
++.+.+|++++.|.|...|+||+||+|| |+.|....+...
T Consensus 115 id~V~~VI~~d~P~SvesyIQRiGRTGR-Gr~G~~~~l~~~ 154 (299)
T d1a1va2 115 LDPTFTIETTTLPQDAVSRTQRRGRTGR-GKPGIYRFVAPG 154 (299)
T ss_dssp CSSSCEEEEEEEECBHHHHHHHHTTBCS-SSCEEEEESCSC
T ss_pred CCcceEEEeCCCCCCHHHHHhhccccCC-CCCceEEEEecC
Confidence 8888899999999999999999999999 888876655444
No 37
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.71 E-value=6e-20 Score=157.10 Aligned_cols=120 Identities=17% Similarity=0.241 Sum_probs=101.8
Q ss_pred cchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEc----CCC
Q 015129 264 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT----DLL 339 (413)
Q Consensus 264 ~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t----~~~ 339 (413)
+.+++.+..+++.. ++++||||++++.++.+++.|+.. +||+++..+|.+++++|.+|+++||||| +.+
T Consensus 11 ~~~~~~l~~~l~~~-~~~~iif~~~~~~~~~l~~~l~~~------~hg~~~~~~R~~~~~~f~~g~~~vLVaT~a~~~v~ 83 (248)
T d1gkub2 11 DESISTLSSILEKL-GTGGIIYARTGEEAEEIYESLKNK------FRIGIVTATKKGDYEKFVEGEIDHLIGTAHYYGTL 83 (248)
T ss_dssp CCCTTTTHHHHTTS-CSCEEEEESSHHHHHHHHHTTTTS------SCEEECTTSSSHHHHHHHHTSCSEEEEECC-----
T ss_pred chHHHHHHHHHHHh-CCCEEEEECCHHHHHHHHHHHHHh------ccCCCCHHHHHHHHHHHHhCCCeEEEEeccccchh
Confidence 45777788888764 468999999999999999999763 7999999999999999999999999999 568
Q ss_pred CCCCCCCC-CcEEEEccCCCChhhHHHhhhhccCCCCcceEEEEeccCcHHHHHHH
Q 015129 340 ARGIDVQQ-VSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 394 (413)
Q Consensus 340 ~~G~d~~~-~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~~~~~~~~~~~~~~~~~~~ 394 (413)
++|+|+|+ +++||+|++|+ |.|++||+||.|+.|.+++++...+......+
T Consensus 84 ~rGlDip~~v~~VI~~d~P~----~~~r~gR~~R~g~~~~~~~~~~~~~~~~~~~l 135 (248)
T d1gkub2 84 VRGLDLPERIRFAVFVGCPS----FRVTIEDIDSLSPQMVKLLAYLYRNVDEIERL 135 (248)
T ss_dssp -CCSCCTTTCCEEEEESCCE----EEEECSCGGGSCHHHHHHHHTTTSCHHHHHTT
T ss_pred hhccCccccccEEEEeCCCc----chhhhhhhhccCcceEeeeeccHhhHHHHHHH
Confidence 99999996 99999999994 88999999999999998888887766655443
No 38
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=99.63 E-value=3.8e-15 Score=132.01 Aligned_cols=136 Identities=18% Similarity=0.223 Sum_probs=113.0
Q ss_pred cchHHHHHHHHHh---hcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCc---EEEEcC
Q 015129 264 EWKLETLCDLYET---LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR---VLITTD 337 (413)
Q Consensus 264 ~~~~~~l~~~~~~---~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~---vli~t~ 337 (413)
..|+..+..++.. ..+.|+|||++.....+.+.+.|...|+.+..++|.++..+|..+++.|+++... +|++|.
T Consensus 100 S~Kl~~L~~ll~~~~~~~g~KvlIFs~~~~~ld~l~~~l~~~g~~~~~l~G~~~~~~R~~~i~~F~~~~~~~~vlLls~~ 179 (346)
T d1z3ix1 100 SGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSSK 179 (346)
T ss_dssp SHHHHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHHSTTCCCCEEEEEGG
T ss_pred CHHHHHHHHHHHHHHHhcCCceeEEeehhhhhHHHHHHHhhhhccccccccchhHHHHHHHHHhhhcccccceeeeecch
Confidence 4577777776653 4567999999999999999999999999999999999999999999999987543 567788
Q ss_pred CCCCCCCCCCCcEEEEccCCCChhhHHHhhhhccCCCCcce--EEEEeccC--cHHHHHHHHHHhc
Q 015129 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGV--AINFVTRD--DERMLFDIQKFYN 399 (413)
Q Consensus 338 ~~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~~~--~~~~~~~~--~~~~~~~~~~~~~ 399 (413)
+.+.|+|+..+++||+++++|++..+.|++||++|.|+... ++.++... +++.+........
T Consensus 180 agg~GlnL~~a~~vi~~d~~wnp~~~~Qa~~R~~R~GQ~~~V~v~rli~~~TiEe~i~~~~~~K~~ 245 (346)
T d1z3ix1 180 AGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKA 245 (346)
T ss_dssp GSCTTCCCTTEEEEEECSCCSSHHHHHHHHTTSSSTTCCSCEEEEEEEETTSHHHHHHHHHHHHHH
T ss_pred hhhhccccccceEEEEecCCCccchHhHhhhcccccCCCCceEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998754 45555554 4455555444444
No 39
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=99.62 E-value=5e-15 Score=129.88 Aligned_cols=157 Identities=14% Similarity=0.115 Sum_probs=103.7
Q ss_pred CCcHHHHhhhhhhh---------cCCcEEEeCCCCCcchHHhHHHHHHccccCC----CceeEEEEcCcHHHHHHHHHHH
Q 015129 62 KPSAIQQRGIVPFC---------KGLDVIQQAQSGTGKTATFCSGILQQLDYGL----VQCQALVLAPTRELAQQIEKVM 128 (413)
Q Consensus 62 ~~~~~Q~~~~~~i~---------~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~----~~~~~liv~P~~~l~~q~~~~~ 128 (413)
.++|||.+++..+. .+..+|+..++|+|||++++..+...+.... ...++|||||. .+..||.+++
T Consensus 55 ~Lr~hQ~~gv~~l~~~~~~~~~~~~~g~iLaDemGlGKT~qaia~l~~l~~~~~~~~~~~~~~LIV~P~-sl~~qW~~Ei 133 (298)
T d1z3ix2 55 VLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPS-SLVRNWYNEV 133 (298)
T ss_dssp TCCHHHHHHHHHHHHHHTTSSSTTCCEEEECCCTTSCHHHHHHHHHHHHHHCCTTSSCSCSCEEEEECH-HHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhhhhccCCceEEEeCCCCCHHHHHHHHHHHHHHhcccccCCCCcEEEEccc-hhhHHHHHHH
Confidence 68999999998653 3567999999999999876554444333322 23479999996 5789999999
Q ss_pred HHhhcccCcEEEEEEcCcchHHHHHHHH--------cCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhccCcH
Q 015129 129 RALGDYLGVKVHACVGGTSVREDQRILQ--------AGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFK 200 (413)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~~~ 200 (413)
.+++... ..+...+++........... ...+++++|++.+..... .+....+++||+||+|++.+.. .
T Consensus 134 ~k~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~sy~~~~~~~~--~l~~~~~~~vI~DEaH~ikn~~-s 209 (298)
T d1z3ix2 134 GKWLGGR-VQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHAE--VLHKGKVGLVICDEGHRLKNSD-N 209 (298)
T ss_dssp HHHHGGG-CCEEEECSSCHHHHHHHHHHHHCCCSSCCSCCEEEEEHHHHHHHTT--TTTTSCCCEEEETTGGGCCTTC-H
T ss_pred HhhcCCc-eeEEEEeCchHHHHHHHHHHhhhccCccccceEEEEeecccccchh--cccccceeeeeccccccccccc-c
Confidence 9987653 33344444443322222111 135799999998865433 2333457899999999987655 3
Q ss_pred HHHHHHHhhCCCCceEEEEEeeCCH
Q 015129 201 DQIYDIFQLLPAKVQVGVFSATMPP 225 (413)
Q Consensus 201 ~~~~~~~~~~~~~~~~i~~SaT~~~ 225 (413)
.....+.. +. ....+++||||..
T Consensus 210 ~~~~a~~~-l~-~~~rllLTGTPi~ 232 (298)
T d1z3ix2 210 QTYLALNS-MN-AQRRVLISGTPIQ 232 (298)
T ss_dssp HHHHHHHH-HC-CSEEEEECSSCSG
T ss_pred hhhhhhhc-cc-cceeeeecchHHh
Confidence 33333333 32 4567899999964
No 40
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.60 E-value=6.4e-15 Score=125.19 Aligned_cols=135 Identities=15% Similarity=0.195 Sum_probs=97.4
Q ss_pred cchHHHHHHHHHhh--cccceEEEEccHHHHHHHHHHhhhC-CCeeEEecCCCCHHHHHHHHHHHhcCC-CcEEEE-cCC
Q 015129 264 EWKLETLCDLYETL--AITQSVIFVNTRRKVDWLTDKMRSR-DHTVSATHGDMDQNTRDIIMREFRSGS-SRVLIT-TDL 338 (413)
Q Consensus 264 ~~~~~~l~~~~~~~--~~~~~lif~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~r~~~~~~f~~~~-~~vli~-t~~ 338 (413)
..|+..+.+++... .++++||||+.....+.+...+... +..+..++|+++..+|..+++.|+++. ..++++ +.+
T Consensus 68 S~K~~~l~~~l~~~~~~g~kviIFs~~~~~~~~l~~~l~~~~~~~~~~i~G~~~~~~R~~~i~~F~~~~~~~vll~~~~~ 147 (244)
T d1z5za1 68 SGKMIRTMEIIEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNPSVKFIVLSVKA 147 (244)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHHHCSCCCEECTTSCHHHHHHHHHHHHHCTTCCEEEEECCT
T ss_pred hhHHHHHHHHHHhhcccccceEEEeeceehHHHHHHHHHhhccceEEEEecccchhccchhhhhhhccccchhccccccc
Confidence 35778887777653 5679999999999999998888654 788999999999999999999998764 677655 578
Q ss_pred CCCCCCCCCCcEEEEccCCCChhhHHHhhhhccCCCCcc--eEEEEeccC--cHHHHHHHHHHh
Q 015129 339 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKG--VAINFVTRD--DERMLFDIQKFY 398 (413)
Q Consensus 339 ~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~~--~~~~~~~~~--~~~~~~~~~~~~ 398 (413)
.++|+|++.+++||+++++|++..+.|++||++|.|+.. .++.++..+ |...+..+.+..
T Consensus 148 ~g~Glnl~~a~~vi~~~~~wn~~~~~Qa~~R~~R~Gq~~~v~i~~l~~~~Tiee~i~~~~~~K~ 211 (244)
T d1z5za1 148 GGFGINLTSANRVIHFDRWWNPAVEDQATDRVYRIGQTRNVIVHKLISVGTLEEKIDQLLAFKR 211 (244)
T ss_dssp TCCCCCCTTCSEEEECSCCSCTTTC--------------CCEEEEEEETTSHHHHHHHHHHHCH
T ss_pred cccccccchhhhhhhcCchhhhHHHhhhcceeeecCCCCceEEEEEeeCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999754 455565665 444455444433
No 41
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.52 E-value=8.9e-15 Score=123.28 Aligned_cols=150 Identities=15% Similarity=0.097 Sum_probs=98.8
Q ss_pred CCcHHHHhhhhhhh----cCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCc
Q 015129 62 KPSAIQQRGIVPFC----KGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGV 137 (413)
Q Consensus 62 ~~~~~Q~~~~~~i~----~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~ 137 (413)
+++|||.+++..+. .+..+++..++|+|||..++..+...... ....++||+|| ..+..||.+++.++....
T Consensus 12 ~L~~yQ~~~v~~~~~~~~~~~g~iLaDe~GlGKT~~~i~~~~~~~~~-~~~~~~LIv~p-~~l~~~W~~e~~~~~~~~-- 87 (230)
T d1z63a1 12 NLRPYQIKGFSWMRFMNKLGFGICLADDMGLGKTLQTIAVFSDAKKE-NELTPSLVICP-LSVLKNWEEELSKFAPHL-- 87 (230)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCCEEECCCTTSCHHHHHHHHHHHHHHT-TCCSSEEEEEC-STTHHHHHHHHHHHCTTS--
T ss_pred chhHHHHHHHHHHHHhhhcCCCEEEEeCCCCChHHHHHHhhhhhhhc-ccccccceecc-hhhhhHHHHHHHhhcccc--
Confidence 68999999997653 35679999999999999976555444333 33348999999 466788999999886532
Q ss_pred EEEEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhccCcHHHHHHHHhhCCCCceEE
Q 015129 138 KVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVG 217 (413)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i 217 (413)
.+........... ....+++++|++.+.....- ..-.+++||+||+|.+.+... ..... ...+. ....+
T Consensus 88 ~~~~~~~~~~~~~-----~~~~~vvi~~~~~~~~~~~l---~~~~~~~vI~DEah~~k~~~s-~~~~~-~~~l~-a~~r~ 156 (230)
T d1z63a1 88 RFAVFHEDRSKIK-----LEDYDIILTTYAVLLRDTRL---KEVEWKYIVIDEAQNIKNPQT-KIFKA-VKELK-SKYRI 156 (230)
T ss_dssp CEEECSSSTTSCC-----GGGSSEEEEEHHHHTTCHHH---HTCCEEEEEEETGGGGSCTTS-HHHHH-HHTSC-EEEEE
T ss_pred cceeeccccchhh-----ccCcCEEEeeHHHHHhHHHH---hcccceEEEEEhhhcccccch-hhhhh-hhhhc-cceEE
Confidence 3332222111111 13468999999887433221 122368999999999876552 22233 33343 44578
Q ss_pred EEEeeCCHh
Q 015129 218 VFSATMPPE 226 (413)
Q Consensus 218 ~~SaT~~~~ 226 (413)
++||||-.+
T Consensus 157 ~LTgTPi~n 165 (230)
T d1z63a1 157 ALTGTPIEN 165 (230)
T ss_dssp EECSSCSTT
T ss_pred EEecchHHh
Confidence 999999753
No 42
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=99.44 E-value=1.8e-13 Score=117.54 Aligned_cols=101 Identities=14% Similarity=0.221 Sum_probs=80.8
Q ss_pred ccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCCCCCcEEEEccC--
Q 015129 279 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDL-- 356 (413)
Q Consensus 279 ~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~d~~~~~~vi~~~~-- 356 (413)
+++++|||++.+.+..+++.|+..|..+..+||.+...++. .|.+++.++||||++++.|+|+ ++.+||+.+.
T Consensus 36 ~g~~~~F~~s~~~~~~~a~~L~~~g~~V~~l~~~~~~~e~~----~~~~~~~~~~~~t~~~~~~~~~-~~~~vid~g~~~ 110 (299)
T d1yksa2 36 KRPTAWFLPSIRAANVMAASLRKAGKSVVVLNRKTFEREYP----TIKQKKPDFILATDIAEMGANL-CVERVLDCRTAF 110 (299)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHTTCCEEECCSSSCC------------CCCSEEEESSSTTCCTTC-CCSEEEECCEEE
T ss_pred CCCEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCcCcHhHHh----hhhcCCcCEEEEechhhhceec-CceEEEecCcee
Confidence 67999999999999999999999999999999999877754 4678999999999999999999 5999986553
Q ss_pred -----------------CCChhhHHHhhhhccCCCCcceEEEEec
Q 015129 357 -----------------PTQPENYLHRIGRSGRFGRKGVAINFVT 384 (413)
Q Consensus 357 -----------------~~s~~~~~Q~~GR~~R~g~~~~~~~~~~ 384 (413)
|.|.++..||.||+||.+....++.++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~qr~gr~gr~~~~~~~~~~y~ 155 (299)
T d1yksa2 111 KPVLVDEGRKVAIKGPLRISASSAAQRRGRIGRNPNRDGDSYYYS 155 (299)
T ss_dssp EEEEETTTTEEEEEEEEECCHHHHHHHHTTSSCCTTCCCEEEEEC
T ss_pred ceeeecCCCCeeEEeeeecCHHHHHHhcccccccCCCceEEEEeC
Confidence 2467788999999999865544554554
No 43
>d1tf5a4 c.37.1.19 (A:396-570) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=99.37 E-value=4.4e-12 Score=98.02 Aligned_cols=123 Identities=15% Similarity=0.223 Sum_probs=97.6
Q ss_pred cccchHHHHHHHHHhh--cccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcC-CCcEEEEcCC
Q 015129 262 KEEWKLETLCDLYETL--AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG-SSRVLITTDL 338 (413)
Q Consensus 262 ~~~~~~~~l~~~~~~~--~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~-~~~vli~t~~ 338 (413)
+...|..++.+.+... .+.++||++.|++.++.+++.|++.++...++++.....+- +++. +.| ...|.|||++
T Consensus 15 T~~eK~~AIi~eV~~~~~~grPVLIgT~SIe~SE~ls~~L~~~gi~h~vLnAk~~~~Ea-~II~--~Ag~~g~VtIATNm 91 (175)
T d1tf5a4 15 TMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLKNKGIPHQVLNAKNHEREA-QIIE--EAGQKGAVTIATNM 91 (175)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCEEEEESCHHHHHHHHHHHHTTTCCCEEECSSCHHHHH-HHHT--TTTSTTCEEEEETT
T ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHHHcCCCceeehhhhHHHHH-HHHH--hccCCCceeehhhH
Confidence 3445666666655432 55699999999999999999999999999999988644333 3333 233 3469999999
Q ss_pred CCCCCCCC--------CCcEEEEccCCCChhhHHHhhhhccCCCCcceEEEEeccCc
Q 015129 339 LARGIDVQ--------QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 387 (413)
Q Consensus 339 ~~~G~d~~--------~~~~vi~~~~~~s~~~~~Q~~GR~~R~g~~~~~~~~~~~~~ 387 (413)
+++|.|++ +--|||....+.|.....|..||+||.|.+|.+..|++-+|
T Consensus 92 AGRGtDikl~~~v~~~GGLhVI~t~~~~s~Rid~Ql~GR~gRQGdpGs~~~~~sleD 148 (175)
T d1tf5a4 92 AGRGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMED 148 (175)
T ss_dssp SSTTCCCCCCTTSGGGTSEEEEESSCCSSHHHHHHHHTTSSGGGCCEEEEEEEETTS
T ss_pred HHcCCCccchHHHHhCCCcEEEEeccCcchhHHHHHhcchhhhCCCcccEEEEEcCH
Confidence 99999976 23578888899999999999999999999999888886654
No 44
>d1tf5a3 c.37.1.19 (A:1-226,A:349-395) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=99.19 E-value=2.8e-10 Score=93.64 Aligned_cols=166 Identities=22% Similarity=0.288 Sum_probs=123.7
Q ss_pred CCCCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcE
Q 015129 59 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVK 138 (413)
Q Consensus 59 ~~~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~ 138 (413)
|. ++++.|.-.--.+.+|+ +..+.||-|||+++.+++.-....++ .+-||+.+--||..=++++..+...+|++
T Consensus 78 G~-RhyDVQLiGgi~L~~G~--iaem~TGEGKTL~a~l~a~l~al~g~---~vhvvTvNdyLA~RDae~m~~iy~~lGls 151 (273)
T d1tf5a3 78 GM-FPFKVQLMGGVALHDGN--IAEMKTGEGKTLTSTLPVYLNALTGK---GVHVVTVNEYLASRDAEQMGKIFEFLGLT 151 (273)
T ss_dssp SC-CCCHHHHHHHHHHHTTS--EEECCTTSCHHHHHHHHHHHHHTTSS---CEEEEESSHHHHHHHHHHHHHHHHHTTCC
T ss_pred ce-EEehhHHHHHHHHHhhh--heeecCCCcchhHHHHHHHHHHhcCC---CceEEecCccccchhhhHHhHHHHHcCCC
Confidence 55 78889988877777887 99999999999998777765554444 88999999999999999999999999999
Q ss_pred EEEEEcCcchHHHHHHHHcCCcEEEEccHHH-HHHHHcCC------CCCCcceEEEeccchHHh-ccCcH----------
Q 015129 139 VHACVGGTSVREDQRILQAGVHVVVGTPGRV-FDMLRRQS------LRPDYIKMFVLDEADEML-SRGFK---------- 200 (413)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l-~~~~~~~~------~~~~~~~~iV~DE~h~~~-~~~~~---------- 200 (413)
+.....+.......... .+||+.+|...| +++++... .....+.+.|+||+|.++ +....
T Consensus 152 vg~~~~~~~~~~r~~~Y--~~di~Ygt~~e~~fDyLrd~~~~~~~~~~~r~~~~aIvDEvDsiliDeartpliisg~~~~ 229 (273)
T d1tf5a3 152 VGLNLNSMSKDEKREAY--AADITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAVIDEVDSILIDEARTPLIISGQSMT 229 (273)
T ss_dssp EEECCTTSCHHHHHHHH--HSSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEEETHHHHHTTTTTCEEEEEEEEEE
T ss_pred ccccccccCHHHHHHHh--hCCceecchhhhhhhhcchhhhcChhhhccCCCCEEEEEcchhhhhhccCCceEeccCccc
Confidence 99988777766555554 479999999877 55555322 223447899999999865 32210
Q ss_pred ---HHHHHHHhhCCCCceEEEEEeeCCHhHHHHHHHhc
Q 015129 201 ---DQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFM 235 (413)
Q Consensus 201 ---~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~~~~~ 235 (413)
-..+..++.. .++.+||+|...+..++.+-+.
T Consensus 230 ~a~it~q~~f~~y---~~l~gmtgta~~~~~e~~~iy~ 264 (273)
T d1tf5a3 230 LATITFQNYFRMY---EKLAGMTGTAKTEEEEFRNIYN 264 (273)
T ss_dssp EEEEEHHHHHTTS---SEEEEEESCCGGGHHHHHHHHC
T ss_pred hhhhhHHHHHHHH---HHHhCCccccHHHHHHHHhccC
Confidence 1234555554 4689999999877655555443
No 45
>d1nkta3 c.37.1.19 (A:-15-225,A:350-396) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.14 E-value=4.7e-10 Score=92.64 Aligned_cols=165 Identities=21% Similarity=0.278 Sum_probs=122.2
Q ss_pred CCCCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcE
Q 015129 59 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVK 138 (413)
Q Consensus 59 ~~~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~ 138 (413)
|. ++++.|.-.--.+.+|+ +..+.||-|||+++.+++.-....++ .+-+|+.+--||..-++++..+...+|+.
T Consensus 95 Gm-RhyDVQLiGgi~l~~g~--iaem~TGEGKTL~a~l~a~l~al~g~---~vhvvTvNdyLA~RDa~~m~~~y~~lGls 168 (288)
T d1nkta3 95 DQ-RPFDVQVMGAAALHLGN--VAEMKTGEGKTLTCVLPAYLNALAGN---GVHIVTVNDYLAKRDSEWMGRVHRFLGLQ 168 (288)
T ss_dssp SC-CCCHHHHHHHHHHHTTE--EEECCTTSCHHHHTHHHHHHHHTTTS---CEEEEESSHHHHHHHHHHHHHHHHHTTCC
T ss_pred cc-eeeeehhHHHHHHhhhh--hhcccCCCchhHHHHHHHHHHHhcCC---CeEEEecCchhhhhhHHHHHHHHHHhCCC
Confidence 55 78888887776666665 99999999999999887765555554 88999999999999999999999999999
Q ss_pred EEEEEcCcchHHHHHHHHcCCcEEEEccHHH-HHHHHcCC------CCCCcceEEEeccchHHh-ccCcH----------
Q 015129 139 VHACVGGTSVREDQRILQAGVHVVVGTPGRV-FDMLRRQS------LRPDYIKMFVLDEADEML-SRGFK---------- 200 (413)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l-~~~~~~~~------~~~~~~~~iV~DE~h~~~-~~~~~---------- 200 (413)
+.....+........... +||+.+|...| .++++... .-...+.+.|+||++.++ +....
T Consensus 169 vg~~~~~~~~~~~~~~Y~--~di~Y~t~~e~gfDyLrd~~~~~~~~~~~r~~~~aIvDEvDsiLiDeartpLiis~~~~a 246 (288)
T d1nkta3 169 VGVILATMTPDERRVAYN--ADITYGTNNEFGFDYLRDNMAHSLDDLVQRGHHYAIVDEVDSILIDEARTPLIISNQTLA 246 (288)
T ss_dssp EEECCTTCCHHHHHHHHH--SSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEETTHHHHHTTGGGSCEEEEEEEEE
T ss_pred cCcccccCChHHHHHHhh--cccccccHHHHhhhhhhhhhccChhhhcccCCcEEEEEcccccccccccCceEeccCCcc
Confidence 999988877666555443 79999999877 55555322 223447899999999865 22210
Q ss_pred -HHHHHHHhhCCCCceEEEEEeeCCHhHHHHHHHh
Q 015129 201 -DQIYDIFQLLPAKVQVGVFSATMPPEALEITRKF 234 (413)
Q Consensus 201 -~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~~~~ 234 (413)
...+..++.. .++-+||+|...+..++..-+
T Consensus 247 ~it~qn~fr~y---~kl~gmtgta~te~~E~~~iy 278 (288)
T d1nkta3 247 TITLQNYFRLY---DKLAGMTGTAQTEAAELHEIY 278 (288)
T ss_dssp EECHHHHHTTS---SEEEEEESCCGGGHHHHHHHH
T ss_pred hhhHHHHHHHH---HHHhCCcccHHHHHHHHHHHh
Confidence 1223444443 468899999987776665544
No 46
>d1nkta4 c.37.1.19 (A:397-615) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.89 E-value=2.4e-08 Score=78.25 Aligned_cols=124 Identities=19% Similarity=0.236 Sum_probs=96.4
Q ss_pred cccchHHHHHHHHHhh--cccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCC-CcEEEEcCC
Q 015129 262 KEEWKLETLCDLYETL--AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS-SRVLITTDL 338 (413)
Q Consensus 262 ~~~~~~~~l~~~~~~~--~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~-~~vli~t~~ 338 (413)
+...|..++.+-+... .+.|+||.+.|++..+.+++.|.+.++.+.++++..-..+ ..|+. +.|. -.|-|||++
T Consensus 15 T~~~K~~Avv~ei~~~h~~GqPVLVGT~SVe~SE~lS~lL~~~gi~h~vLNAK~herE-AeIIA--qAG~~GaVTIATNM 91 (219)
T d1nkta4 15 TEEAKYIAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFTKRRIPHNVLNAKYHEQE-ATIIA--VAGRRGGVTVATNM 91 (219)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEECSSCHHHH-HHHHH--TTTSTTCEEEEETT
T ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEeeCcHHHHHHHHHHHHHhccchhccchhhHHHH-HHHHH--hcccCCcEEeeccc
Confidence 4445677666655433 5569999999999999999999999999999999854322 33333 3443 458899999
Q ss_pred CCCCCCCCC----------------------------------------------------CcEEEEccCCCChhhHHHh
Q 015129 339 LARGIDVQQ----------------------------------------------------VSLVINYDLPTQPENYLHR 366 (413)
Q Consensus 339 ~~~G~d~~~----------------------------------------------------~~~vi~~~~~~s~~~~~Q~ 366 (413)
+++|.||.- -=+||-.....|..-=-|.
T Consensus 92 AGRGTDI~LGgn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~GGL~VIGTErHeSrRIDnQL 171 (219)
T d1nkta4 92 AGRGTDIVLGGNVDFLTDQRLRERGLDPVETPEEYEAAWHSELPIVKEEASKEAKEVIEAGGLYVLGTERHESRRIDNQL 171 (219)
T ss_dssp CSTTCCCCTTCCHHHHHHHHHHHTTCCTTTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTSEEEEECSCCSSHHHHHHH
T ss_pred cCCCCceeecCchhhhhHHHhhhcccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeccccccccccccc
Confidence 999999842 2356767777788888999
Q ss_pred hhhccCCCCcceEEEEeccCcH
Q 015129 367 IGRSGRFGRKGVAINFVTRDDE 388 (413)
Q Consensus 367 ~GR~~R~g~~~~~~~~~~~~~~ 388 (413)
.||+||.|.+|.+..|++-.|.
T Consensus 172 RGRsGRQGDPGsSrFflSLeDd 193 (219)
T d1nkta4 172 RGRSGRQGDPGESRFYLSLGDE 193 (219)
T ss_dssp HHTSSGGGCCEEEEEEEETTSH
T ss_pred cccccccCCCccceeEEeccHH
Confidence 9999999999999999988765
No 47
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=98.42 E-value=3.1e-07 Score=80.94 Aligned_cols=145 Identities=17% Similarity=0.161 Sum_probs=85.8
Q ss_pred CCCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccc-cCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcE
Q 015129 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLD-YGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVK 138 (413)
Q Consensus 60 ~~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~-~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~ 138 (413)
.....+.|..|+..++.++-++|.||+|||||.+....+..... ....+.++++++||..-+..+.+.........+..
T Consensus 146 ~~~~~~~Q~~A~~~al~~~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~ApTgkAA~~L~e~~~~~~~~~~~~ 225 (359)
T d1w36d1 146 VSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLT 225 (359)
T ss_dssp CTTSCCHHHHHHHHHHTBSEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBSSHHHHHHHHHHHTHHHHHSSCC
T ss_pred CcccccHHHHHHHHHHcCCeEEEEcCCCCCceehHHHHHHHHHHHHhccCCeEEEecCcHHHHHHHHHHHHHHHhhcCch
Confidence 34567889999999999999999999999999875322211111 12334589999999988887777665433222110
Q ss_pred EEEEEcCcchHHHHHHHHcCCcEEEEccHHHH------HHHHcCCCCCCcceEEEeccchHHhccCcHHHHHHHHhhCCC
Q 015129 139 VHACVGGTSVREDQRILQAGVHVVVGTPGRVF------DMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPA 212 (413)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~------~~~~~~~~~~~~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~ 212 (413)
...... ...-..|..++. ..+.........++++|+||+-.+ ....+..++..++.
T Consensus 226 ~~~~~~--------------~~~~~~t~~~ll~~~~~~~~~~~~~~~~l~~d~lIIDEaSmv----~~~l~~~ll~~~~~ 287 (359)
T d1w36d1 226 DEQKKR--------------IPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMI----DLPMMSRLIDALPD 287 (359)
T ss_dssp SCCCCS--------------CSCCCBTTTSCC-----------CTTSCCSCSEEEECSGGGC----BHHHHHHHHHTCCT
T ss_pred hhhhhh--------------hhhhhhHHHHHHhhhhcchHHHHhhhcccccceeeehhhhcc----CHHHHHHHHHHhcC
Confidence 000000 000011111110 111222333445799999999875 34556678888888
Q ss_pred CceEEEEEee
Q 015129 213 KVQVGVFSAT 222 (413)
Q Consensus 213 ~~~~i~~SaT 222 (413)
..++|++.-.
T Consensus 288 ~~~lILvGD~ 297 (359)
T d1w36d1 288 HARVIFLGDR 297 (359)
T ss_dssp TCEEEEEECT
T ss_pred CCEEEEECCh
Confidence 8888876543
No 48
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=98.15 E-value=1.7e-06 Score=74.81 Aligned_cols=69 Identities=16% Similarity=0.117 Sum_probs=54.2
Q ss_pred CCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHcccc-CCCceeEEEEcCcHHHHHHHHHHHHHhh
Q 015129 62 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY-GLVQCQALVLAPTRELAQQIEKVMRALG 132 (413)
Q Consensus 62 ~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~-~~~~~~~liv~P~~~l~~q~~~~~~~~~ 132 (413)
+|+|-|.+++.. ....++|.|++|||||.+++..+.+.+.. .....+++++++|+.++..+.+.+.+..
T Consensus 1 ~L~~eQ~~av~~--~~~~~lI~g~aGTGKTt~l~~rv~~ll~~~~~~~~~ILvlt~tn~a~~~i~~~~~~~~ 70 (306)
T d1uaaa1 1 RLNPGQQQAVEF--VTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTL 70 (306)
T ss_dssp CCCHHHHHHHHC--CSSEEEECCCTTSCHHHHHHHHHHHHHHHHCCCGGGEEEEESSHHHHHHHHHHHHHHS
T ss_pred CcCHHHHHHHhC--CCCCEEEEeeCCccHHHHHHHHHHHHHHhcCCChhHEEEEeCcHHHHHHHHHHHHHhc
Confidence 478999999976 45679999999999999876665555443 2233489999999999999888887754
No 49
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=97.85 E-value=1.5e-05 Score=69.09 Aligned_cols=69 Identities=17% Similarity=0.172 Sum_probs=54.7
Q ss_pred CCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCC-CceeEEEEcCcHHHHHHHHHHHHHhh
Q 015129 62 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL-VQCQALVLAPTRELAQQIEKVMRALG 132 (413)
Q Consensus 62 ~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~-~~~~~liv~P~~~l~~q~~~~~~~~~ 132 (413)
.+++-|.+++.+ .+..++|.|++|||||.+++-.+.+.+.... ...+++++++++..+..+...+....
T Consensus 11 ~L~~eQ~~~v~~--~~g~~lV~g~aGSGKTt~l~~ri~~ll~~~~~~p~~il~lt~t~~aa~~~~~~~~~~~ 80 (318)
T d1pjra1 11 HLNKEQQEAVRT--TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLL 80 (318)
T ss_dssp TSCHHHHHHHHC--CSSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHhC--CCCCEEEEecCCccHHHHHHHHHHHHHHcCCCCHHHeEeEeccHHHHHHHHHHHHhhc
Confidence 578999999986 3567999999999999998766665554432 33489999999999999888887653
No 50
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=97.85 E-value=1.3e-05 Score=64.66 Aligned_cols=39 Identities=15% Similarity=0.089 Sum_probs=28.8
Q ss_pred CCcHHHHhhhhhhhc----C---CcEEEeCCCCCcchHHhHHHHHH
Q 015129 62 KPSAIQQRGIVPFCK----G---LDVIQQAQSGTGKTATFCSGILQ 100 (413)
Q Consensus 62 ~~~~~Q~~~~~~i~~----~---~~~li~~~tGsGKT~~~~~~~~~ 100 (413)
.++|+|..+++.+.+ + +.+++.||+|+|||..+...+..
T Consensus 2 ~~yPw~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~~~a~~ 47 (207)
T d1a5ta2 2 RWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRY 47 (207)
T ss_dssp CCCGGGHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHcCCcCeEEEEECCCCCcHHHHHHHHHHh
Confidence 357888888887653 2 34899999999999886554443
No 51
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=97.43 E-value=0.00012 Score=69.49 Aligned_cols=71 Identities=17% Similarity=0.168 Sum_probs=56.4
Q ss_pred CCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccCC-CceeEEEEcCcHHHHHHHHHHHHHhhc
Q 015129 61 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL-VQCQALVLAPTRELAQQIEKVMRALGD 133 (413)
Q Consensus 61 ~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~-~~~~~liv~P~~~l~~q~~~~~~~~~~ 133 (413)
..|++-|.+++.. ...+++|.|+.|||||.+++-.+...+.... ...++++++.|+..+.++.+++++...
T Consensus 10 ~~L~~eQ~~~v~~--~~~~~lV~A~AGSGKT~~lv~ri~~ll~~~~~~p~~Il~ltft~~Aa~ei~~Ri~~~l~ 81 (623)
T g1qhh.1 10 AHLNKEQQEAVRT--TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLG 81 (623)
T ss_dssp TTSCHHHHHHHHC--CSSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHHHHG
T ss_pred HhcCHHHHHHHcC--CCCCEEEEEeCchHHHHHHHHHHHHHHHcCCCCcccEEEEeccHHHHHHHHHHHHHhcc
Confidence 4789999999974 4677888899999999998777766655432 334899999999999999988877543
No 52
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=97.29 E-value=0.0012 Score=54.00 Aligned_cols=38 Identities=13% Similarity=0.280 Sum_probs=24.5
Q ss_pred cceEEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEE
Q 015129 182 YIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFS 220 (413)
Q Consensus 182 ~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~S 220 (413)
...++|+||+|.+.... ...+.+.++..+....+++.|
T Consensus 115 ~~kviiIde~d~l~~~~-q~~Llk~lE~~~~~~~~il~t 152 (239)
T d1njfa_ 115 RFKVYLIDEVHMLSRHS-FNALLKTLEEPPEHVKFLLAT 152 (239)
T ss_dssp SSEEEEEETGGGSCHHH-HHHHHHHHHSCCTTEEEEEEE
T ss_pred CCEEEEEECcccCCHHH-HHHHHHHHhcCCCCeEEEEEc
Confidence 46799999999874332 445566666655566555544
No 53
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=97.27 E-value=0.00047 Score=55.40 Aligned_cols=42 Identities=19% Similarity=0.347 Sum_probs=25.3
Q ss_pred ceEEEeccchHHhcc-CcHHHHHHHHhhCC-CCceEEEEEeeCC
Q 015129 183 IKMFVLDEADEMLSR-GFKDQIYDIFQLLP-AKVQVGVFSATMP 224 (413)
Q Consensus 183 ~~~iV~DE~h~~~~~-~~~~~~~~~~~~~~-~~~~~i~~SaT~~ 224 (413)
.+++++|++|.+... .+...+..++..+. .+.++++.|..++
T Consensus 98 ~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p 141 (213)
T d1l8qa2 98 VDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHP 141 (213)
T ss_dssp CSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCG
T ss_pred ccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCcc
Confidence 689999999988643 23444555555544 3455555444443
No 54
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.25 E-value=0.00022 Score=56.59 Aligned_cols=116 Identities=9% Similarity=0.087 Sum_probs=64.8
Q ss_pred HHhhhhhhhc---CCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEE
Q 015129 67 QQRGIVPFCK---GLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 143 (413)
Q Consensus 67 Q~~~~~~i~~---~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~ 143 (413)
|.+.+..+.+ +.++++.||.|+|||..+...+-.........+.++++.|...
T Consensus 2 ~~~~l~~~i~~~~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~~------------------------ 57 (198)
T d2gnoa2 2 QLETLKRIIEKSEGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGE------------------------ 57 (198)
T ss_dssp HHHHHHHHHHTCSSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSSS------------------------
T ss_pred HHHHHHHHHhcCCCceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCcC------------------------
Confidence 4555555544 5689999999999998765433221111122224555555210
Q ss_pred cCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEEeeC
Q 015129 144 GGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 223 (413)
Q Consensus 144 ~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT~ 223 (413)
.|-|-....+.+.+.... .....+++|+||||.+.... ...+.+.++.-+.+..++++|..+
T Consensus 58 ----------------~I~Id~IR~i~~~~~~~~-~~~~~KviIId~ad~l~~~a-qNaLLK~LEEPp~~t~fiLit~~~ 119 (198)
T d2gnoa2 58 ----------------NIGIDDIRTIKDFLNYSP-ELYTRKYVIVHDCERMTQQA-ANAFLKALEEPPEYAVIVLNTRRW 119 (198)
T ss_dssp ----------------CBCHHHHHHHHHHHTSCC-SSSSSEEEEETTGGGBCHHH-HHHTHHHHHSCCTTEEEEEEESCG
T ss_pred ----------------CCCHHHHHHHHHHHhhCc-ccCCCEEEEEeCccccchhh-hhHHHHHHhCCCCCceeeeccCCh
Confidence 000001111222222222 23446899999999875443 567777777777777777776655
Q ss_pred C
Q 015129 224 P 224 (413)
Q Consensus 224 ~ 224 (413)
.
T Consensus 120 ~ 120 (198)
T d2gnoa2 120 H 120 (198)
T ss_dssp G
T ss_pred h
Confidence 4
No 55
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=97.12 E-value=0.00045 Score=51.07 Aligned_cols=88 Identities=18% Similarity=0.140 Sum_probs=51.2
Q ss_pred EEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcCC
Q 015129 80 VIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 159 (413)
Q Consensus 80 ~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
-++.||+.||||.-.+-.+-.....+ .+++++-|...-- . +-.+....|. . ..
T Consensus 5 ~~i~GpMfsGKTteLi~~~~~~~~~~---~kv~~ikp~~D~R---------~----~~~i~s~~g~-~----------~~ 57 (139)
T d2b8ta1 5 EFITGPMFAGKTAELIRRLHRLEYAD---VKYLVFKPKIDTR---------S----IRNIQSRTGT-S----------LP 57 (139)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHHHTT---CCEEEEEECCCGG---------G----CSSCCCCCCC-S----------SC
T ss_pred EEEEccccCHHHHHHHHHHHHHHHCC---CcEEEEEEccccc---------c----cceEEcccCc-e----------ee
Confidence 37899999999977554443333233 3899999975421 0 0111111111 1 12
Q ss_pred cEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHh
Q 015129 160 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEML 195 (413)
Q Consensus 160 ~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~ 195 (413)
.+.+.+...+.+.+..... ....++|.+||+|.+.
T Consensus 58 ~~~~~~~~~~~~~~~~~~~-~~~~dvI~IDE~QFf~ 92 (139)
T d2b8ta1 58 SVEVESAPEILNYIMSNSF-NDETKVIGIDEVQFFD 92 (139)
T ss_dssp CEEESSTHHHHHHHHSTTS-CTTCCEEEECSGGGSC
T ss_pred eEEeccchhhHHHHHhhcc-ccCcCEEEechhhhcc
Confidence 3556666666666654332 3567999999999763
No 56
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=97.12 E-value=0.00029 Score=56.01 Aligned_cols=131 Identities=17% Similarity=0.234 Sum_probs=62.7
Q ss_pred EEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcC-cHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcC
Q 015129 80 VIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAP-TRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAG 158 (413)
Q Consensus 80 ~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P-~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
++++||||+|||.+..-.+.+ +... +.++.+++. +--.+ ..++++.++...++.+............
T Consensus 12 i~lvGptGvGKTTTiAKLA~~-~~~~--g~kV~lit~Dt~R~g--A~eQL~~~a~~l~v~~~~~~~~~d~~~~------- 79 (211)
T d2qy9a2 12 ILMVGVNGVGKTTTIGKLARQ-FEQQ--GKSVMLAAGDTFRAA--AVEQLQVWGQRNNIPVIAQHTGADSASV------- 79 (211)
T ss_dssp EEEECCTTSCHHHHHHHHHHH-HHTT--TCCEEEECCCTTCHH--HHHHHHHHHHHTTCCEECCSTTCCHHHH-------
T ss_pred EEEECCCCCCHHHHHHHHHHH-HHHC--CCcEEEEeccccccc--chhhhhhhhhhcCCcccccccCCCHHHH-------
Confidence 578999999999887554443 3222 225555444 32111 2344555555556655433322221111
Q ss_pred CcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHh-ccCcHHHHHHHHhhCC------CCceEEEEEeeCCHhHHHHH
Q 015129 159 VHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLP------AKVQVGVFSATMPPEALEIT 231 (413)
Q Consensus 159 ~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~-~~~~~~~~~~~~~~~~------~~~~~i~~SaT~~~~~~~~~ 231 (413)
+.+.... ....++++|++|=+=+.. +......+..+.+... +...++.++|+...+.....
T Consensus 80 ----------l~~~~~~--a~~~~~d~ilIDTaGr~~~d~~~~~el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~ 147 (211)
T d2qy9a2 80 ----------IFDAIQA--AKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQA 147 (211)
T ss_dssp ----------HHHHHHH--HHHTTCSEEEECCCCCGGGHHHHHHHHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHHHH
T ss_pred ----------HHHHHHH--HHHcCCCEEEeccCCCccccHHHHHHHHHHHHHHhhhcccCcceeeeehhcccCcchHHHH
Confidence 1111110 001235788888765422 1112234444433322 23457778888876555544
Q ss_pred HHh
Q 015129 232 RKF 234 (413)
Q Consensus 232 ~~~ 234 (413)
..+
T Consensus 148 ~~~ 150 (211)
T d2qy9a2 148 KLF 150 (211)
T ss_dssp HHH
T ss_pred hhh
Confidence 433
No 57
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=97.11 E-value=0.00082 Score=53.37 Aligned_cols=132 Identities=24% Similarity=0.280 Sum_probs=65.3
Q ss_pred CcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcC--cHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHH
Q 015129 78 LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAP--TRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 155 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P--~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (413)
+-++++||||+|||.+..-.+.+....+ .++.+++. .|.-+. +.++.++...+..+...............
T Consensus 11 ~vi~lvGp~GvGKTTTiaKLA~~~~~~g---~kV~lit~Dt~R~gA~---eQL~~~a~~l~v~~~~~~~~~~~~~~~~~- 83 (207)
T d1ls1a2 11 NLWFLVGLQGSGKTTTAAKLALYYKGKG---RRPLLVAADTQRPAAR---EQLRLLGEKVGVPVLEVMDGESPESIRRR- 83 (207)
T ss_dssp EEEEEECCTTTTHHHHHHHHHHHHHHTT---CCEEEEECCSSCHHHH---HHHHHHHHHHTCCEEECCTTCCHHHHHHH-
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHCC---CcEEEEecccccchHH---HHHHHHHHhcCCccccccccchhhHHHHH-
Confidence 3357799999999988655444433322 25555544 222232 33444444445555443332221111000
Q ss_pred HcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhc-cCcHHHHHHHHhhCCCCceEEEEEeeCCHhHHHHHHHh
Q 015129 156 QAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLS-RGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKF 234 (413)
Q Consensus 156 ~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~-~~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~~~~ 234 (413)
..... ...++++|++|=+-+... ......+..+....++...++.++|+...+.......+
T Consensus 84 -------------~~~~~-----~~~~~d~vlIDTaGr~~~d~~~~~el~~~~~~~~~~~~llv~~a~~~~~~~~~~~~f 145 (207)
T d1ls1a2 84 -------------VEEKA-----RLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARAF 145 (207)
T ss_dssp -------------HHHHH-----HHHTCCEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGTHHHHHHHHHH
T ss_pred -------------HHHHH-----hhccCcceeecccccchhhhhhHHHHHHHHhhcCCceEEEEeccccchhHHHHHHHH
Confidence 00000 011246677776654221 11234555555555656667788888777666655544
No 58
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.04 E-value=0.0018 Score=53.27 Aligned_cols=88 Identities=18% Similarity=0.153 Sum_probs=67.2
Q ss_pred cccceEEEEccHHHHHHHH----HHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcCC-CCCCCCCCCCcEEE
Q 015129 278 AITQSVIFVNTRRKVDWLT----DKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL-LARGIDVQQVSLVI 352 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~----~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~-~~~G~d~~~~~~vi 352 (413)
.+.++++.+|+.--+...+ +.|...|..+..+||+++..+|.+++....+|+++|+|+|.+ +...+.+.++..||
T Consensus 131 ~g~q~~~m~Pt~~La~Qh~~~~~~~f~~~~~~v~~l~~~~~~~~r~~~~~~~~~g~~~iiIGThsl~~~~~~f~~Lglvi 210 (264)
T d1gm5a3 131 AGFQTAFMVPTSILAIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQEDVHFKNLGLVI 210 (264)
T ss_dssp HTSCEEEECSCHHHHHHHHHHHHHHHTCSSCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHHHCCCCSCCCEEE
T ss_pred cccceeEEeehHhhhHHHHHHHHHhhhhccccceeeccccchHHHHHHHHHHHCCCCCEEEeehHHhcCCCCccccceee
Confidence 5679999999976665554 555556889999999999999999999999999999999975 45678888898888
Q ss_pred EccCCCChhhHHHhh
Q 015129 353 NYDLPTQPENYLHRI 367 (413)
Q Consensus 353 ~~~~~~s~~~~~Q~~ 367 (413)
...... -.+.||.
T Consensus 211 iDEqH~--fgv~Qr~ 223 (264)
T d1gm5a3 211 IDEQHR--FGVKQRE 223 (264)
T ss_dssp EESCCC--C-----C
T ss_pred eccccc--cchhhHH
Confidence 776432 2455554
No 59
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.96 E-value=0.00042 Score=57.37 Aligned_cols=41 Identities=10% Similarity=0.227 Sum_probs=27.6
Q ss_pred cceEEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEEeeC
Q 015129 182 YIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 223 (413)
Q Consensus 182 ~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT~ 223 (413)
...++|+||+|.+... ....+..++...+.++.+++.|-.+
T Consensus 131 ~~~iiiide~d~l~~~-~~~~l~~~~e~~~~~~~~Il~tn~~ 171 (252)
T d1sxje2 131 RYKCVIINEANSLTKD-AQAALRRTMEKYSKNIRLIMVCDSM 171 (252)
T ss_dssp CCEEEEEECTTSSCHH-HHHHHHHHHHHSTTTEEEEEEESCS
T ss_pred CceEEEeccccccccc-cchhhhcccccccccccceeeeccc
Confidence 3679999999987444 3455667777777677666654433
No 60
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=96.87 E-value=0.007 Score=48.62 Aligned_cols=101 Identities=18% Similarity=0.102 Sum_probs=78.5
Q ss_pred EEEeccccchHHHHHHHHHh--hcccceEEEEccHHHHHHHHHHhhh----CCCeeEEecCCCCHHHHHHHHHHHhcCCC
Q 015129 257 YVNVEKEEWKLETLCDLYET--LAITQSVIFVNTRRKVDWLTDKMRS----RDHTVSATHGDMDQNTRDIIMREFRSGSS 330 (413)
Q Consensus 257 ~~~~~~~~~~~~~l~~~~~~--~~~~~~lif~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~r~~~~~~f~~~~~ 330 (413)
...-....+|.......+.. ..++++++.+|+.--+....+.+++ .+..+..+|+..+..+|..+++.+.+|+.
T Consensus 80 LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~Pt~~La~Q~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~~ 159 (233)
T d2eyqa3 80 LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKI 159 (233)
T ss_dssp EEECCCCTTTHHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHSTTTTCCEEEESTTSCHHHHHHHHHHHHTTCC
T ss_pred EEEcCCCCCcHHHHHHHHHHHHHcCCceEEEccHHHhHHHHHHHHHHHHhhCCCEEEeccCcccchhHHHHHHHHhCCCC
Confidence 33344455666555544433 2567999999999888888777765 57789999999999999999999999999
Q ss_pred cEEEEcC-CCCCCCCCCCCcEEEEccCC
Q 015129 331 RVLITTD-LLARGIDVQQVSLVINYDLP 357 (413)
Q Consensus 331 ~vli~t~-~~~~G~d~~~~~~vi~~~~~ 357 (413)
+|+|.|. .+...+.++++..||.....
T Consensus 160 ~iviGths~l~~~~~f~~LgLiIiDEeH 187 (233)
T d2eyqa3 160 DILIGTHKLLQSDVKFKDLGLLIVDEEH 187 (233)
T ss_dssp SEEEECTHHHHSCCCCSSEEEEEEESGG
T ss_pred CEEEeehhhhccCCccccccceeeechh
Confidence 9999998 45557888888888876553
No 61
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.81 E-value=0.0011 Score=48.61 Aligned_cols=39 Identities=10% Similarity=0.045 Sum_probs=26.1
Q ss_pred CcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHH
Q 015129 78 LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 119 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~ 119 (413)
.=-++.||+.||||.-.+-.+-.....+ .+++++-|...
T Consensus 3 ~L~li~GpMfsGKTt~Li~~~~~~~~~g---~~v~~ikp~~D 41 (133)
T d1xbta1 3 QIQVILGPMFSGKSTELMRRVRRFQIAQ---YKCLVIKYAKD 41 (133)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHTTT---CCEEEEEETTC
T ss_pred EEEEEEecccCHHHHHHHHHHHHHHHcC---CcEEEEecccc
Confidence 3357899999999977544443332233 38999998654
No 62
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=96.75 E-value=0.0036 Score=51.21 Aligned_cols=54 Identities=13% Similarity=0.028 Sum_probs=31.1
Q ss_pred hccCcccCCCCHHHHHHHHHCCCCCCcHHHHhhhhhh--hcCCcEEEeCCCCCcchHHh
Q 015129 38 VYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPF--CKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 38 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~Q~~~~~~i--~~~~~~li~~~tGsGKT~~~ 94 (413)
|-.+|++++-.+.+.+.|... + .+ ..+.+.+..+ ...+.+++.||+|+|||..+
T Consensus 4 p~~~~~di~G~~~~k~~l~~~-i-~~-l~~~~~~~~~g~~~~~giLl~GppGtGKT~la 59 (247)
T d1ixza_ 4 PKVTFKDVAGAEEAKEELKEI-V-EF-LKNPSRFHEMGARIPKGVLLVGPPGVGKTHLA 59 (247)
T ss_dssp CSCCGGGCCSCHHHHHHHHHH-H-HH-HHCHHHHHHTTCCCCSEEEEECCTTSSHHHHH
T ss_pred CCCcHHHHccHHHHHHHHHHH-H-HH-HHCHHHHHHcCCCCCceEEEecCCCCChhHHH
Confidence 446788886666666655431 0 00 0011122221 12467999999999999875
No 63
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.72 E-value=0.00067 Score=55.03 Aligned_cols=43 Identities=19% Similarity=0.274 Sum_probs=28.4
Q ss_pred CcceEEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEEeeCC
Q 015129 181 DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 224 (413)
Q Consensus 181 ~~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT~~ 224 (413)
....++|+||+|.+.... ...+.......+....+++.+....
T Consensus 100 ~~~kviiiDe~d~~~~~~-~~~ll~~~e~~~~~~~~i~~~~~~~ 142 (224)
T d1sxjb2 100 GKHKIVILDEADSMTAGA-QQALRRTMELYSNSTRFAFACNQSN 142 (224)
T ss_dssp TCCEEEEEESGGGSCHHH-HHTTHHHHHHTTTTEEEEEEESCGG
T ss_pred cceEEEEEecccccchhH-HHHHhhhccccccceeeeeccCchh
Confidence 346799999999876543 4455556666666666666665543
No 64
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=96.72 E-value=0.0008 Score=53.50 Aligned_cols=132 Identities=18% Similarity=0.179 Sum_probs=57.9
Q ss_pred cEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcC
Q 015129 79 DVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAG 158 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
-++++||||+|||.+..-.+.+. .... ..-.+|-+.+--.. -.++++.++...+..+..............
T Consensus 14 vi~lvGptGvGKTTTiAKLA~~~-~~~g-~kV~lit~Dt~R~g--a~eQL~~~a~~l~v~~~~~~~~~~~~~~~~----- 84 (211)
T d1j8yf2 14 VIMLVGVQGTGKATTAGKLAYFY-KKKG-FKVGLVGADVYRPA--ALEQLQQLGQQIGVPVYGEPGEKDVVGIAK----- 84 (211)
T ss_dssp EEEEECSCCC----HHHHHHHHH-HHTT-CCEEEEECCCSSHH--HHHHHHHHHHHHTCCEECCTTCCCHHHHHH-----
T ss_pred EEEEECCCCCCHHHHHHHHHHHH-HHCC-CceEEEEeeccccc--hhHHHHHhccccCcceeecccchhhhHHHH-----
Confidence 36779999999998865444333 2222 22444444432211 123344444444554432222111110000
Q ss_pred CcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhccC---cHHHHHHHHhhCCCCceEEEEEeeCCHhHHHHHHH
Q 015129 159 VHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG---FKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRK 233 (413)
Q Consensus 159 ~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~---~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~~~ 233 (413)
....... ..+.++|++|=+=+..... ....+..+....++...++.++|+...+.......
T Consensus 85 ---------~a~~~~~-----~~~~d~IlIDTaGr~~~~~~~~~~~el~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~ 148 (211)
T d1j8yf2 85 ---------RGVEKFL-----SEKMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASK 148 (211)
T ss_dssp ---------HHHHHHH-----HTTCSEEEEECCCSCCTTCHHHHHHHHHHHHHHHCCSEEEEEEEGGGGGGHHHHHHH
T ss_pred ---------HHHHHhh-----ccCCceEEEecCCcCccchhhHHHHHHHHHHhhcCCceEEEEEecccCcchHHHHhh
Confidence 0000001 1225778888664311111 12445556666655566777888877655444433
No 65
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.64 E-value=0.0024 Score=51.85 Aligned_cols=41 Identities=17% Similarity=0.302 Sum_probs=24.4
Q ss_pred CcceEEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEEee
Q 015129 181 DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSAT 222 (413)
Q Consensus 181 ~~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT 222 (413)
....++++||+|.+.... ...+..++........+++.+..
T Consensus 108 ~~~~iilide~d~~~~~~-~~~ll~~l~~~~~~~~~i~~~n~ 148 (231)
T d1iqpa2 108 ASFKIIFLDEADALTQDA-QQALRRTMEMFSSNVRFILSCNY 148 (231)
T ss_dssp CSCEEEEEETGGGSCHHH-HHHHHHHHHHTTTTEEEEEEESC
T ss_pred CCceEEeehhhhhcchhH-HHHHhhhcccCCcceEEEeccCC
Confidence 345789999999765443 34455555555555555544333
No 66
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=96.64 E-value=0.0015 Score=48.22 Aligned_cols=40 Identities=15% Similarity=0.098 Sum_probs=26.4
Q ss_pred CCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHH
Q 015129 77 GLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 119 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~ 119 (413)
|.=-++.||+.||||.-.+-.+-.....+ .+++++-|...
T Consensus 7 G~l~lI~GpMfSGKTteLi~~~~~~~~~g---~~vl~i~~~~D 46 (141)
T d1xx6a1 7 GWVEVIVGPMYSGKSEELIRRIRRAKIAK---QKIQVFKPEID 46 (141)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTT---CCEEEEEEC--
T ss_pred eeEEEEEeccccHHHHHHHHHHHHhhhcC---CcEEEEEeccc
Confidence 44458899999999977554443333333 38999999755
No 67
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.43 E-value=0.0032 Score=50.84 Aligned_cols=42 Identities=19% Similarity=0.360 Sum_probs=26.8
Q ss_pred CCCCcceEEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEE
Q 015129 178 LRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFS 220 (413)
Q Consensus 178 ~~~~~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~S 220 (413)
.......++|+||+|.+.... ...+..++......+.+++.+
T Consensus 95 ~~~~~~kiiiiDe~d~~~~~~-~~~Ll~~le~~~~~~~~~~~~ 136 (227)
T d1sxjc2 95 IFSKGFKLIILDEADAMTNAA-QNALRRVIERYTKNTRFCVLA 136 (227)
T ss_dssp SSSCSCEEEEETTGGGSCHHH-HHHHHHHHHHTTTTEEEEEEE
T ss_pred ccCCCeEEEEEeccccchhhH-HHHHHHHhhhcccceeecccc
Confidence 344456799999999875443 455666666666555555443
No 68
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=96.40 E-value=0.00099 Score=58.81 Aligned_cols=66 Identities=29% Similarity=0.383 Sum_probs=48.4
Q ss_pred CCcHHHHhhhhhhhc----C-CcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhc
Q 015129 62 KPSAIQQRGIVPFCK----G-LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGD 133 (413)
Q Consensus 62 ~~~~~Q~~~~~~i~~----~-~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~ 133 (413)
.|.--|=+|++.+.+ | ++.++.|-||||||+++ ..++.. .+..+|||+|+..+|.|+++.++.+..
T Consensus 11 ~p~gDQP~aI~~l~~~l~~g~~~q~l~GltGS~ka~~i-A~l~~~-----~~rp~LVVt~n~~~A~qL~~dL~~~l~ 81 (413)
T d1t5la1 11 EPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTI-SNVIAQ-----VNKPTLVIAHNKTLAGQLYSELKEFFP 81 (413)
T ss_dssp CCCTTHHHHHHHHHHHHHHTCSEEEEEECTTSCHHHHH-HHHHHH-----HTCCEEEECSSHHHHHHHHHHHHHHCT
T ss_pred CCCCCCHHHHHHHHHHHhcCCCcEEEeCCCCcHHHHHH-HHHHHH-----hCCCEEEEeCCHHHHHHHHHHHHHHcC
Confidence 344456666666554 4 56889999999999774 233322 123899999999999999999999864
No 69
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.36 E-value=0.016 Score=45.79 Aligned_cols=59 Identities=24% Similarity=0.251 Sum_probs=32.8
Q ss_pred cEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEE
Q 015129 79 DVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHA 141 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~ 141 (413)
-++++||||+|||.+..-.+.+....+ ..-.++-+.+--.. ..++++.++...+..+..
T Consensus 13 vi~lvGptGvGKTTTiAKLAa~~~~~~--~kV~lit~Dt~R~g--A~eQL~~~a~~l~i~~~~ 71 (213)
T d1vmaa2 13 VIMVVGVNGTGKTTSCGKLAKMFVDEG--KSVVLAAADTFRAA--AIEQLKIWGERVGATVIS 71 (213)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTT--CCEEEEEECTTCHH--HHHHHHHHHHHHTCEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCC--CceEEEeecccccc--hhHHHHHHhhhcCccccc
Confidence 468899999999988655444433222 22455555543222 223455554445665543
No 70
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.36 E-value=0.0016 Score=53.03 Aligned_cols=42 Identities=17% Similarity=0.279 Sum_probs=26.1
Q ss_pred cceEEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEEeeCC
Q 015129 182 YIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMP 224 (413)
Q Consensus 182 ~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT~~ 224 (413)
...++|+||+|.+.... ...+..+.........++..+....
T Consensus 108 ~~~viiiDe~d~l~~~~-~~~l~~~~~~~~~~~~~i~~~~~~~ 149 (237)
T d1sxjd2 108 PYKIIILDEADSMTADA-QSALRRTMETYSGVTRFCLICNYVT 149 (237)
T ss_dssp SCEEEEETTGGGSCHHH-HHHHHHHHHHTTTTEEEEEEESCGG
T ss_pred CceEEEEecccccCHHH-HHHHhhccccccccccccccccccc
Confidence 35689999999886543 3455555566555555555444433
No 71
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.34 E-value=0.006 Score=48.12 Aligned_cols=24 Identities=29% Similarity=0.216 Sum_probs=18.2
Q ss_pred CCcEEEeCCCCCcchHHhHHHHHH
Q 015129 77 GLDVIQQAQSGTGKTATFCSGILQ 100 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~~~~~~~ 100 (413)
++-++++||||+|||.+..-.+.+
T Consensus 6 ~~vi~lvGptGvGKTTTiaKLA~~ 29 (207)
T d1okkd2 6 GRVVLVVGVNGVGKTTTIAKLGRY 29 (207)
T ss_dssp SSEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHH
Confidence 456788999999999886554443
No 72
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=96.31 E-value=0.0033 Score=49.36 Aligned_cols=101 Identities=15% Similarity=0.143 Sum_probs=72.8
Q ss_pred ceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHH----HHcCCcEEEEccHHHHHHHHcCCCCCCcc
Q 015129 108 QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI----LQAGVHVVVGTPGRVFDMLRRQSLRPDYI 183 (413)
Q Consensus 108 ~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~iii~T~~~l~~~~~~~~~~~~~~ 183 (413)
+.++.||||..+-.....+.+.+... +.++..+||..+..+.... .....+|+|||. .+ +-+.+..+.
T Consensus 31 GgQvy~V~p~I~~~e~~~~~l~~~~p--~~~i~~lHGkm~~~eke~im~~F~~g~~~ILv~Tt-----vI-EvGiDvpnA 102 (211)
T d2eyqa5 31 GGQVYYLYNDVENIQKAAERLAELVP--EARIAIGHGQMRERELERVMNDFHHQRFNVLVCTT-----II-ETGIDIPTA 102 (211)
T ss_dssp TCEEEEECCCSSCHHHHHHHHHHHCT--TSCEEECCSSCCHHHHHHHHHHHHTTSCCEEEESS-----TT-GGGSCCTTE
T ss_pred CCeEEEEEcCccchhhHHHHHHHhCC--ceEEEEEEeccCHHHHHHHHHHHHcCCcceEEEeh-----hh-hhccCCCCC
Confidence 34999999999888888888888754 6789999998887665443 346789999993 33 346788889
Q ss_pred eEEEeccchHHhccCcHHHHHHHHhhCCC---CceEEEEE
Q 015129 184 KMFVLDEADEMLSRGFKDQIYDIFQLLPA---KVQVGVFS 220 (413)
Q Consensus 184 ~~iV~DE~h~~~~~~~~~~~~~~~~~~~~---~~~~i~~S 220 (413)
.++|+..|+++ -..++..+.-+... ....++++
T Consensus 103 ~~iiI~~a~rf----GLaQLhQLRGRVGR~~~~s~c~l~~ 138 (211)
T d2eyqa5 103 NTIIIERADHF----GLAQLHQLRGRVGRSHHQAYAWLLT 138 (211)
T ss_dssp EEEEETTTTSS----CHHHHHHHHTTCCBTTBCEEEEEEE
T ss_pred cEEEEecchhc----cccccccccceeeecCccceEEEEe
Confidence 99999999985 23445555555432 23344554
No 73
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=96.31 E-value=0.0057 Score=50.23 Aligned_cols=55 Identities=20% Similarity=0.198 Sum_probs=31.9
Q ss_pred hhccCcccCCCCHHHHHHHHHC--CCCCCcHHHHhhhhhhhcCCcEEEeCCCCCcchHHh
Q 015129 37 EVYDSFDAMGLQENLLRGIYAY--GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~l~~~--~~~~~~~~Q~~~~~~i~~~~~~li~~~tGsGKT~~~ 94 (413)
++-.+|++.+-.+...+.+.+. .+..+..+|... +...+.+++.||+|+|||+.+
T Consensus 6 ~~~~t~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g---~~~~~~iLL~GppGtGKT~la 62 (256)
T d1lv7a_ 6 QIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLG---GKIPKGVLMVGPPGTGKTLLA 62 (256)
T ss_dssp SSCCCGGGSCSCHHHHHHTHHHHHHHHCGGGC--------CCCCEEEEECCTTSCHHHHH
T ss_pred CCCCCHHHHhchHHHHHHHHHHHHHHHCHHHHHHcC---CCCCCeEEeeCCCCCCccHHH
Confidence 4456788887777777666431 011111111111 112467999999999999875
No 74
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=95.69 E-value=0.0061 Score=51.90 Aligned_cols=52 Identities=21% Similarity=0.254 Sum_probs=35.4
Q ss_pred HHHHhhhhhh-hcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHH
Q 015129 65 AIQQRGIVPF-CKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120 (413)
Q Consensus 65 ~~Q~~~~~~i-~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l 120 (413)
+-+...+..+ ..+++++++|+||||||.. +.+++..+.. ..+++.+-.+.++
T Consensus 153 ~~~~~~l~~~v~~~~nili~G~tgSGKTT~-l~al~~~i~~---~~rivtiEd~~El 205 (323)
T d1g6oa_ 153 EQAISAIKDGIAIGKNVIVCGGTGSGKTTY-IKSIMEFIPK---EERIISIEDTEEI 205 (323)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESTTSSHHHH-HHHHGGGSCT---TCCEEEEESSCCC
T ss_pred HHHHHHHHHHHHhCCCEEEEeeccccchHH-HHHHhhhccc---ccceeeccchhhh
Confidence 4444445443 4478999999999999976 4555555433 3378888777775
No 75
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=95.41 E-value=0.029 Score=43.41 Aligned_cols=114 Identities=16% Similarity=0.181 Sum_probs=63.2
Q ss_pred CCcEEEeCCCCCcchHHhHHHHHHccccC-----CCceeEEEEcCcHHHH------HHHHHHHHHhhccc---CcEEEEE
Q 015129 77 GLDVIQQAQSGTGKTATFCSGILQQLDYG-----LVQCQALVLAPTRELA------QQIEKVMRALGDYL---GVKVHAC 142 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~~~~~~~~~~~~-----~~~~~~liv~P~~~l~------~q~~~~~~~~~~~~---~~~~~~~ 142 (413)
..|++++||+|.|||...- .+.+.+..+ ..+ +-+|.+....|. .+|.++++...... .-++..+
T Consensus 43 k~n~lLvG~pGVGKTalv~-~LA~ri~~~~vp~~L~~-~~i~~ld~~~LiAg~~~rG~~E~rl~~il~e~~~~~~~iILf 120 (195)
T d1jbka_ 43 KNNPVLIGEPGVGKTAIVE-GLAQRIINGEVPEGLKG-RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 120 (195)
T ss_dssp SCEEEEECCTTSCHHHHHH-HHHHHHHHTCSCGGGTT-CEEEEECHHHHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEEE
T ss_pred CCCeEEEecCCcccHHHHH-HHHHHHHhCCCCHHHcC-ceEEEeeHHHHhccCCccHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 4689999999999997753 333333322 223 445555555554 36666665544322 1122322
Q ss_pred Ec-------------CcchHHH-HHHHHc-CCc-EEEEccHHHHHHHHcCCCCCCcceEEEeccch
Q 015129 143 VG-------------GTSVRED-QRILQA-GVH-VVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 192 (413)
Q Consensus 143 ~~-------------~~~~~~~-~~~~~~-~~~-iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h 192 (413)
.+ +.+.... ...+.. ... |.-|||+.+..+++........|..|-++|-.
T Consensus 121 IDeih~l~~~g~~~g~~d~~~~Lkp~L~rg~l~~IgatT~eey~~~~e~d~aL~rrF~~I~V~Ep~ 186 (195)
T d1jbka_ 121 IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 186 (195)
T ss_dssp EETGGGGTT------CCCCHHHHHHHHHTTSCCEEEEECHHHHHHHTTTCHHHHTTEEEEECCCCC
T ss_pred cchHHHHhcCCCCCCcccHHHHHHHHHhCCCceEEecCCHHHHHHHHHcCHHHHhcCCEeecCCCC
Confidence 21 1111111 112222 223 44577888887777666556778999999875
No 76
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=95.37 E-value=0.033 Score=42.23 Aligned_cols=76 Identities=17% Similarity=0.205 Sum_probs=60.5
Q ss_pred ceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHH----HHcCCcEEEEccHHHHHHHHcCCCCCCcc
Q 015129 108 QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI----LQAGVHVVVGTPGRVFDMLRRQSLRPDYI 183 (413)
Q Consensus 108 ~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~iii~T~~~l~~~~~~~~~~~~~~ 183 (413)
+.++||.|+++.-++.+.+.+.+. |+.+..++|+....+.... .....+|+|+| -+...+++.+++
T Consensus 31 g~r~lvfc~t~~~~~~l~~~L~~~----Gi~a~~~Hg~~~~~eR~~~l~~F~~G~~~vLVaT------~v~~~GiDip~V 100 (174)
T d1c4oa2 31 GERTLVTVLTVRMAEELTSFLVEH----GIRARYLHHELDAFKRQALIRDLRLGHYDCLVGI------NLLREGLDIPEV 100 (174)
T ss_dssp TCEEEEECSSHHHHHHHHHHHHHT----TCCEEEECTTCCHHHHHHHHHHHHTTSCSEEEES------CCCCTTCCCTTE
T ss_pred CCcEEEEEcchhHHHHHHHHHHhc----CCceEEEecccchHHHHHHHHHHHCCCeEEEEee------eeeeeeccCCCC
Confidence 449999999999998888888774 8899999999887766544 34678999999 344567889999
Q ss_pred eEEEeccchH
Q 015129 184 KMFVLDEADE 193 (413)
Q Consensus 184 ~~iV~DE~h~ 193 (413)
++||+=.++.
T Consensus 101 ~~Vi~~~~~~ 110 (174)
T d1c4oa2 101 SLVAILDADK 110 (174)
T ss_dssp EEEEETTTTS
T ss_pred cEEEEecccc
Confidence 9998866654
No 77
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=94.52 E-value=0.016 Score=50.87 Aligned_cols=66 Identities=35% Similarity=0.465 Sum_probs=47.9
Q ss_pred CCcHHHHhhhhhhh----cCCc-EEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhc
Q 015129 62 KPSAIQQRGIVPFC----KGLD-VIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGD 133 (413)
Q Consensus 62 ~~~~~Q~~~~~~i~----~~~~-~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~ 133 (413)
+|+--|-+|++.+. +|.+ ..+.|.+|||||++. ..+.... +..+|||||+...|.++++.+..+..
T Consensus 8 ~p~~dqp~aI~~l~~~L~~g~~~~~L~GlsgS~ka~~~-A~l~~~~-----~rp~LvVt~~~~~A~~l~~dL~~~l~ 78 (408)
T d1c4oa1 8 SPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTM-AKVIEAL-----GRPALVLAPNKILAAQLAAEFRELFP 78 (408)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCSEEEEEECTTSCHHHHH-HHHHHHH-----TCCEEEEESSHHHHHHHHHHHHHHCT
T ss_pred CCCCCCHHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH-HHHHHHh-----CCCEEEEeCCHHHHHHHHHHHHHhcC
Confidence 55556766666654 4554 688999999999764 2222221 22789999999999999999999864
No 78
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=94.43 E-value=0.03 Score=50.40 Aligned_cols=56 Identities=23% Similarity=0.112 Sum_probs=42.2
Q ss_pred CCcEEEeCCCCCcchHHhHHHHHHccccCC---------CceeEEEEcCcHHHHHHHHHHHHHhh
Q 015129 77 GLDVIQQAQSGTGKTATFCSGILQQLDYGL---------VQCQALVLAPTRELAQQIEKVMRALG 132 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~~~~~~~~~~~~~---------~~~~~liv~P~~~l~~q~~~~~~~~~ 132 (413)
....+|.|+.|||||.+..--++..+..+. .-..+|+|+=|+.-+.++.+++.+..
T Consensus 16 ~g~~lv~A~AGsGKT~~l~~r~~~ll~~~~~~~~~~~~~~~~~IL~lTFT~kAA~Emk~RI~~~L 80 (485)
T d1w36b1 16 QGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNI 80 (485)
T ss_dssp SSCEEEECCTTSCHHHHHHHHHHHHHTTCSSSSSCSSCCCGGGEEEEESCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCchHHHHHHHHHHHHHHhhCcccccccCCCCcccEeEeccHHHHHHHHHHHHHHHH
Confidence 456899999999999998777777664321 11369999999988888888775543
No 79
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=94.40 E-value=0.13 Score=39.16 Aligned_cols=75 Identities=23% Similarity=0.296 Sum_probs=59.7
Q ss_pred eeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHH----HHcCCcEEEEccHHHHHHHHcCCCCCCcce
Q 015129 109 CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI----LQAGVHVVVGTPGRVFDMLRRQSLRPDYIK 184 (413)
Q Consensus 109 ~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~iii~T~~~l~~~~~~~~~~~~~~~ 184 (413)
.+++|.|+++.-+..+...+.+. |+.+..++|+.+..+.... .....+|+||| -+...+++..+++
T Consensus 32 ~~~iif~~~~~~~~~~~~~l~~~----g~~~~~~hg~~~~~eR~~~l~~Fr~g~~~vLVaT------dv~~rGiDip~v~ 101 (181)
T d1t5la2 32 ERTLVTTLTKKMAEDLTDYLKEA----GIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVGI------NLLREGLDIPEVS 101 (181)
T ss_dssp CEEEEECSSHHHHHHHHHHHHTT----TCCEEEECSSCCHHHHHHHHHHHHHTSCSEEEES------CCCSSSCCCTTEE
T ss_pred CeEEEEeehhhhhHHHHHHHHhC----CcceeEecCCccHHHHHHHHHHHHCCCCCEEEeh------hHHHccCCCCCCC
Confidence 38999999999888877777654 8899999999987765443 34688999999 3345678899999
Q ss_pred EEEeccchH
Q 015129 185 MFVLDEADE 193 (413)
Q Consensus 185 ~iV~DE~h~ 193 (413)
+||.-++..
T Consensus 102 ~VI~~d~p~ 110 (181)
T d1t5la2 102 LVAILDADK 110 (181)
T ss_dssp EEEETTTTS
T ss_pred EEEEecCCc
Confidence 999887764
No 80
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=94.39 E-value=0.021 Score=50.25 Aligned_cols=39 Identities=23% Similarity=0.307 Sum_probs=27.5
Q ss_pred cHHHHhhhhhhhc--CCcEEEeCCCCCcchHHhHHHHHHccc
Q 015129 64 SAIQQRGIVPFCK--GLDVIQQAQSGTGKTATFCSGILQQLD 103 (413)
Q Consensus 64 ~~~Q~~~~~~i~~--~~~~li~~~tGsGKT~~~~~~~~~~~~ 103 (413)
.+.|...+..+.. +.-+++.||||||||.+. ..++..+.
T Consensus 143 ~~~~~~~l~~l~~~~~GliLvtGpTGSGKSTTl-~~~l~~~~ 183 (401)
T d1p9ra_ 143 TAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTL-YAGLQELN 183 (401)
T ss_dssp CHHHHHHHHHHHTSSSEEEEEECSTTSCHHHHH-HHHHHHHC
T ss_pred cHHHHHHHHHHHhhhhceEEEEcCCCCCccHHH-HHHhhhhc
Confidence 5667667776665 345799999999999874 45555553
No 81
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.35 E-value=0.012 Score=45.20 Aligned_cols=27 Identities=22% Similarity=0.234 Sum_probs=19.7
Q ss_pred CcEEEeCCCCCcchHHhHHHHHHccccC
Q 015129 78 LDVIQQAQSGTGKTATFCSGILQQLDYG 105 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~~~~~~~~~~~ 105 (413)
++++|.||+|+|||..+. .++..+...
T Consensus 2 k~v~ItG~~GtGKTtl~~-~i~~~l~~~ 28 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIH-KASEVLKSS 28 (189)
T ss_dssp CCEEEESCCSSCHHHHHH-HHHHHHHHT
T ss_pred cEEEEECCCCCcHHHHHH-HHHHHHHHC
Confidence 689999999999998643 444444433
No 82
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.18 E-value=0.13 Score=38.53 Aligned_cols=74 Identities=15% Similarity=0.248 Sum_probs=56.3
Q ss_pred ceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHH----HcCCcEEEEccHHHHHHHHcCCCCCCcc
Q 015129 108 QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL----QAGVHVVVGTPGRVFDMLRRQSLRPDYI 183 (413)
Q Consensus 108 ~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~iii~T~~~l~~~~~~~~~~~~~~ 183 (413)
..++||.|.++..++++++.+... +..+..++|+....+..... .....|+|+|. +...+.++.++
T Consensus 27 ~~k~iIF~~s~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~r~~~l~~f~~~~~~iLv~Td------v~~rGiDi~~v 96 (162)
T d1fuka_ 27 VTQAVIFCNTRRKVEELTTKLRND----KFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTD------LLARGIDVQQV 96 (162)
T ss_dssp CSCEEEEESSHHHHHHHHHHHHHT----TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEEEG------GGTTTCCCCSC
T ss_pred CCcEEEEEEEEchHHHHHHHHhhc----CceEEEeccCCchhhHHHHHHHHhhcccceeeccc------cccccccCCCc
Confidence 348999999999999988877664 67888999988876654432 35678999993 33567788889
Q ss_pred eEEEeccc
Q 015129 184 KMFVLDEA 191 (413)
Q Consensus 184 ~~iV~DE~ 191 (413)
++||.=+.
T Consensus 97 ~~VI~~d~ 104 (162)
T d1fuka_ 97 SLVINYDL 104 (162)
T ss_dssp SEEEESSC
T ss_pred eEEEEecc
Confidence 88876554
No 83
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=93.95 E-value=0.021 Score=49.31 Aligned_cols=18 Identities=22% Similarity=0.362 Sum_probs=15.8
Q ss_pred CCcEEEeCCCCCcchHHh
Q 015129 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~ 94 (413)
-.++++.||||.|||..+
T Consensus 68 ~~niLfiGPTGvGKTElA 85 (364)
T d1um8a_ 68 KSNILLIGPTGSGKTLMA 85 (364)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred CcceeeeCCCCccHHHHH
Confidence 367999999999999876
No 84
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=93.73 E-value=0.11 Score=38.50 Aligned_cols=133 Identities=20% Similarity=0.222 Sum_probs=70.8
Q ss_pred EEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcc----hHHHHHHH
Q 015129 80 VIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS----VREDQRIL 155 (413)
Q Consensus 80 ~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 155 (413)
+.+--..|-|||.+++-.+++++-.+. +++++-=.+.-... .. .......+........+.. ..+....
T Consensus 5 i~vytG~GKGKTTAAlG~alRA~G~G~---rV~ivQFlKg~~~~--ge-~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~- 77 (157)
T d1g5ta_ 5 IIVFTGNGKGKTTAAFGTAARAVGHGK---NVGVVQFIKGTWPN--GE-RNLLEPHGVEFQVMATGFTWETQNREADTA- 77 (157)
T ss_dssp EEEEESSSSCHHHHHHHHHHHHHHTTC---CEEEEESSCCSSCC--HH-HHHHGGGTCEEEECCTTCCCCGGGHHHHHH-
T ss_pred EEEEeCCCCCcHHHHHHHHHHHhcCCC---EEEEEEEecCCccc--ch-hhhhcccCcEEEEecCCCcccCCChHHHHH-
Confidence 445556699999999988888877666 77777543321000 00 1111222333322211111 0110000
Q ss_pred HcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhccCc--HHHHHHHHhhCCCCceEEEEEeeCCHhHHH
Q 015129 156 QAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGF--KDQIYDIFQLLPAKVQVGVFSATMPPEALE 229 (413)
Q Consensus 156 ~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~~--~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~ 229 (413)
.........+. ...-..+++||+||+-...+.++ ...+..++...|...-+|+..-.+++++.+
T Consensus 78 ---------~a~~~~~~a~~-~~~~~~~dllILDEi~~Ai~~gli~~~~v~~ll~~rp~~~evVlTGr~~p~~L~e 143 (157)
T d1g5ta_ 78 ---------ACMAVWQHGKR-MLADPLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGCHRDILD 143 (157)
T ss_dssp ---------HHHHHHHHHHH-HTTCTTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTTCEEEEECSSCCHHHHH
T ss_pred ---------HHHHHHHHHHH-HhhcCccCEEeHHHHHHHHHcCCCCHHHHHHHHHhCCCCCEEEEECCCCCHHHHH
Confidence 00111222221 12334479999999998887663 467777777777777777655556665544
No 85
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=93.61 E-value=0.02 Score=48.45 Aligned_cols=18 Identities=22% Similarity=0.359 Sum_probs=16.4
Q ss_pred CCcEEEeCCCCCcchHHh
Q 015129 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~ 94 (413)
.+++++.||||+|||..+
T Consensus 49 ~~~iLl~GPpG~GKT~lA 66 (309)
T d1ofha_ 49 PKNILMIGPTGVGKTEIA 66 (309)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred CceEEEECCCCCCHHHHH
Confidence 578999999999999876
No 86
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=93.28 E-value=0.053 Score=44.41 Aligned_cols=25 Identities=24% Similarity=0.315 Sum_probs=18.6
Q ss_pred CcEEEeCCCCCcchHHhHHHHHHccc
Q 015129 78 LDVIQQAQSGTGKTATFCSGILQQLD 103 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~~~~~~~~~ 103 (413)
.++++.||+|+|||.++ -.+...+.
T Consensus 44 ~~lll~GppGtGKT~l~-~~l~~~l~ 68 (276)
T d1fnna2 44 PRATLLGRPGTGKTVTL-RKLWELYK 68 (276)
T ss_dssp CEEEEECCTTSSHHHHH-HHHHHHHT
T ss_pred CceEEECCCCCCHHHHH-HHHHHHHh
Confidence 68999999999999775 33444443
No 87
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.25 E-value=0.21 Score=37.67 Aligned_cols=75 Identities=13% Similarity=0.173 Sum_probs=56.6
Q ss_pred ceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHH----HHcCCcEEEEccHHHHHHHHcCCCCCCcc
Q 015129 108 QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI----LQAGVHVVVGTPGRVFDMLRRQSLRPDYI 183 (413)
Q Consensus 108 ~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~iii~T~~~l~~~~~~~~~~~~~~ 183 (413)
..++||.|+++.-+..++..+... +..+..++|+.+....... .....+++|||. ....+.++.++
T Consensus 32 ~~k~iVF~~~~~~~~~l~~~L~~~----g~~~~~~h~~~~~~~r~~~~~~f~~~~~~ilv~Td------~~~~Gid~~~v 101 (171)
T d1s2ma2 32 INQAIIFCNSTNRVELLAKKITDL----GYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSD------LLTRGIDIQAV 101 (171)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHH----TCCEEEECTTSCHHHHHHHHHHHHTTSSSEEEESS------CSSSSCCCTTE
T ss_pred CCceEEEEeeeehhhHhHHhhhcc----cccccccccccchhhhhhhhhhcccCccccccchh------Hhhhcccccee
Confidence 348999999999888888877765 7888889998886655443 335788999994 23467788888
Q ss_pred eEEEeccch
Q 015129 184 KMFVLDEAD 192 (413)
Q Consensus 184 ~~iV~DE~h 192 (413)
++||.=++.
T Consensus 102 ~~VI~~d~p 110 (171)
T d1s2ma2 102 NVVINFDFP 110 (171)
T ss_dssp EEEEESSCC
T ss_pred EEEEecCCc
Confidence 988865554
No 88
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=93.20 E-value=0.017 Score=51.40 Aligned_cols=18 Identities=22% Similarity=0.359 Sum_probs=16.3
Q ss_pred CCcEEEeCCCCCcchHHh
Q 015129 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~ 94 (413)
.+|+|+.||||+|||+.+
T Consensus 49 ksNILliGPTGvGKTlLA 66 (443)
T d1g41a_ 49 PKNILMIGPTGVGKTEIA 66 (443)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred cccEEEECCCCCCHHHHH
Confidence 579999999999999876
No 89
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=92.97 E-value=0.04 Score=48.93 Aligned_cols=44 Identities=16% Similarity=0.283 Sum_probs=30.8
Q ss_pred hcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHH
Q 015129 75 CKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELA 121 (413)
Q Consensus 75 ~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~ 121 (413)
...+|++|.|+||||||..+...+.+.+..+ ..++|+=|..++.
T Consensus 48 ~~~~H~~I~G~tGsGKT~~l~~li~~~~~~g---~~~iiiD~kge~~ 91 (433)
T d1e9ra_ 48 AEPRHLLVNGATGTGKSVLLRELAYTGLLRG---DRMVIVDPNGDML 91 (433)
T ss_dssp GGGGCEEEEECTTSSHHHHHHHHHHHHHHTT---CEEEEEEETTHHH
T ss_pred cccceEEEEeCCCCcHHHHHHHHHHHHHhCC---CCEEEEeCChhHH
Confidence 4468999999999999987544444444333 3778888876653
No 90
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=92.69 E-value=0.25 Score=38.26 Aligned_cols=71 Identities=11% Similarity=0.191 Sum_probs=53.7
Q ss_pred ceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHH----HHcCCcEEEEccHHHHHHHHcCCCCCCcc
Q 015129 108 QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI----LQAGVHVVVGTPGRVFDMLRRQSLRPDYI 183 (413)
Q Consensus 108 ~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~iii~T~~~l~~~~~~~~~~~~~~ 183 (413)
+.++||.|+|+..+..++..+... ++.+..++|+......... .....+|+|+|. ....+++..++
T Consensus 30 ~~~~IIF~~t~~~~~~l~~~l~~~----~~~~~~~h~~~~~~~r~~~~~~f~~g~~~ilvaTd------~~~~GiD~p~v 99 (200)
T d1oywa3 30 GKSGIIYCNSRAKVEDTAARLQSK----GISAAAYHAGLENNVRADVQEKFQRDDLQIVVATV------AFGMGINKPNV 99 (200)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHHT----TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEECT------TSCTTTCCTTC
T ss_pred CCCEEEEEeeehhhHHhhhhhccC----CceeEEecCCCcHHHHHHHHHHHhcccceEEEecc------hhhhccCCCCC
Confidence 348999999999998888877764 7788899998886655443 335778999993 33456788888
Q ss_pred eEEEe
Q 015129 184 KMFVL 188 (413)
Q Consensus 184 ~~iV~ 188 (413)
++||.
T Consensus 100 ~~VI~ 104 (200)
T d1oywa3 100 RFVVH 104 (200)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 88873
No 91
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=92.46 E-value=0.036 Score=41.45 Aligned_cols=19 Identities=16% Similarity=0.176 Sum_probs=16.2
Q ss_pred CCcEEEeCCCCCcchHHhH
Q 015129 77 GLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~~ 95 (413)
.+++++.||+|+|||.++-
T Consensus 2 ~k~I~l~G~~GsGKSTvak 20 (169)
T d1kaga_ 2 KRNIFLVGPMGAGKSTIGR 20 (169)
T ss_dssp CCCEEEECCTTSCHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHH
Confidence 3678999999999998764
No 92
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.34 E-value=0.27 Score=36.84 Aligned_cols=96 Identities=16% Similarity=0.214 Sum_probs=64.5
Q ss_pred EEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHH----HH
Q 015129 81 IQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI----LQ 156 (413)
Q Consensus 81 li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 156 (413)
.+.-+....|... +..++.. ....+++|.|+++.-+......+... +..+..++|+....+.... ..
T Consensus 12 ~v~v~~~~~K~~~-L~~ll~~----~~~~k~iiF~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~r~~~~~~fk~ 82 (168)
T d2j0sa2 12 FVAVEREEWKFDT-LCDLYDT----LTITQAVIFCNTKRKVDWLTEKMREA----NFTVSSMHGDMPQKERESIMKEFRS 82 (168)
T ss_dssp EEEESSTTHHHHH-HHHHHHH----HTSSEEEEECSSHHHHHHHHHHHHHT----TCCCEEECTTSCHHHHHHHHHHHHH
T ss_pred EEEecChHHHHHH-HHHHHHh----CCCCceEEEeeeHHHHHHHHHHhhhc----ccchhhhhhhhhHHHHHHHHHHHhc
Confidence 3333444456433 3334332 22338999999999998888877765 6778888988887665443 24
Q ss_pred cCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccc
Q 015129 157 AGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEA 191 (413)
Q Consensus 157 ~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~ 191 (413)
...+|+|||. +...+.++.++++||.=++
T Consensus 83 g~~~iLv~Td------~~~rGiDi~~v~~VIn~d~ 111 (168)
T d2j0sa2 83 GASRVLISTD------VWARGLDVPQVSLIINYDL 111 (168)
T ss_dssp TSSCEEEECG------GGSSSCCCTTEEEEEESSC
T ss_pred CCccEEeccc------hhcccccccCcceEEEecC
Confidence 5789999993 3356788888998875443
No 93
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=92.19 E-value=0.031 Score=42.45 Aligned_cols=19 Identities=21% Similarity=0.372 Sum_probs=16.2
Q ss_pred cCCcEEEeCCCCCcchHHh
Q 015129 76 KGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~ 94 (413)
.|+-+++.||+|||||.++
T Consensus 3 ~g~iI~l~G~~GsGKSTia 21 (176)
T d1zp6a1 3 GGNILLLSGHPGSGKSTIA 21 (176)
T ss_dssp TTEEEEEEECTTSCHHHHH
T ss_pred CCeEEEEECCCCCCHHHHH
Confidence 4666889999999999875
No 94
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=92.17 E-value=0.048 Score=43.95 Aligned_cols=38 Identities=21% Similarity=0.196 Sum_probs=28.2
Q ss_pred cCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcC
Q 015129 76 KGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAP 116 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P 116 (413)
.|.-+++.|++|+|||..++-.+......+. ++++++-
T Consensus 25 ~gsl~li~G~pGsGKT~l~~qia~~~~~~~~---~~~~is~ 62 (242)
T d1tf7a2 25 KDSIILATGATGTGKTLLVSRFVENACANKE---RAILFAY 62 (242)
T ss_dssp SSCEEEEEECTTSSHHHHHHHHHHHHHTTTC---CEEEEES
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhcc---ccceeec
Confidence 3567899999999999887766666544433 6777764
No 95
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.04 E-value=0.24 Score=37.17 Aligned_cols=73 Identities=8% Similarity=0.046 Sum_probs=53.1
Q ss_pred eeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHH----HHcCCcEEEEccHHHHHHHHcCCCCCCcce
Q 015129 109 CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI----LQAGVHVVVGTPGRVFDMLRRQSLRPDYIK 184 (413)
Q Consensus 109 ~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~iii~T~~~l~~~~~~~~~~~~~~~ 184 (413)
.++||.|+++.-+..+.+.+.+. +..+..++|+.+..+.... .....+++|+|.. ...+.++..++
T Consensus 28 ~k~iIF~~~~~~~~~l~~~L~~~----~~~~~~ihg~~~~~~r~~~l~~F~~g~~~iLv~T~~------~~~Gid~~~~~ 97 (168)
T d1t5ia_ 28 NQVVIFVKSVQRCIALAQLLVEQ----NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNL------FGRGMDIERVN 97 (168)
T ss_dssp SSEEEECSSHHHHHHHHHHHHHT----TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEESSC------CSTTCCGGGCS
T ss_pred CeEEEEEeeeecchhhhhhhccc----cccccccccccchhhhhhhhhhhccccceeeecccc------ccchhhcccch
Confidence 38999999999888888777664 6788899998876655443 2356789999932 23566777777
Q ss_pred EEEeccc
Q 015129 185 MFVLDEA 191 (413)
Q Consensus 185 ~iV~DE~ 191 (413)
++|.=+.
T Consensus 98 ~vi~~~~ 104 (168)
T d1t5ia_ 98 IAFNYDM 104 (168)
T ss_dssp EEEESSC
T ss_pred hhhhhhc
Confidence 7765554
No 96
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.96 E-value=0.34 Score=36.27 Aligned_cols=75 Identities=19% Similarity=0.187 Sum_probs=55.3
Q ss_pred CceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHH----HHcCCcEEEEccHHHHHHHHcCCCCCCc
Q 015129 107 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI----LQAGVHVVVGTPGRVFDMLRRQSLRPDY 182 (413)
Q Consensus 107 ~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~iii~T~~~l~~~~~~~~~~~~~ 182 (413)
...++||.|.++.-+..+...+.+ .+.++..++|+......... ......++|+|. ....++++..
T Consensus 31 ~~~~~lIF~~~~~~~~~l~~~l~~----~~~~~~~~hg~~~~~~R~~~~~~F~~g~~~ilv~Td------~~~~Gid~~~ 100 (168)
T d2rb4a1 31 TIGQAIIFCQTRRNAKWLTVEMIQ----DGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTN------VCARGIDVKQ 100 (168)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHT----TTCCEEEECSSCCHHHHHHHHHHHHTTSCSEEEECC------SCCTTTCCTT
T ss_pred CCCcEEEEcCHHHHHHHHHHHHHh----cCCcceecccchhhHHHHHHhhhhcCCceeeeechh------hhhhhhcccc
Confidence 334999999999988888777665 37889999999887665443 345788999993 2345677888
Q ss_pred ceEEEeccc
Q 015129 183 IKMFVLDEA 191 (413)
Q Consensus 183 ~~~iV~DE~ 191 (413)
+++||.=++
T Consensus 101 v~~Vi~yd~ 109 (168)
T d2rb4a1 101 VTIVVNFDL 109 (168)
T ss_dssp EEEEEESSC
T ss_pred ccEEEeecC
Confidence 888875333
No 97
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=91.74 E-value=0.047 Score=43.95 Aligned_cols=17 Identities=29% Similarity=0.317 Sum_probs=15.3
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
.++++.||+|+|||.++
T Consensus 36 ~~~L~~GPpGtGKT~lA 52 (238)
T d1in4a2 36 DHVLLAGPPGLGKTTLA 52 (238)
T ss_dssp CCEEEESSTTSSHHHHH
T ss_pred CeEEEECCCCCcHHHHH
Confidence 57999999999999876
No 98
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=91.66 E-value=0.11 Score=42.36 Aligned_cols=116 Identities=16% Similarity=0.191 Sum_probs=60.3
Q ss_pred CCcEEEeCCCCCcchHHhHHHHHHccccC-----CCceeEEEEcCcHHHH-----HHHHHHHHHhhccc--CcEEEEEEc
Q 015129 77 GLDVIQQAQSGTGKTATFCSGILQQLDYG-----LVQCQALVLAPTRELA-----QQIEKVMRALGDYL--GVKVHACVG 144 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~~~~~~~~~~~~-----~~~~~~liv~P~~~l~-----~q~~~~~~~~~~~~--~~~~~~~~~ 144 (413)
..|++++||+|.|||...-- +.+.+..+ ..+.+++.+-+..-++ .+|.+.+..+.... .-++..+.+
T Consensus 39 k~n~lLVG~~GvGKTalv~~-la~ri~~~~vp~~l~~~~i~~l~~~~liag~~~~g~~e~r~~~i~~~~~~~~~iIlfiD 117 (268)
T d1r6bx2 39 KNNPLLVGESGVGKTAIAEG-LAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFID 117 (268)
T ss_dssp SCEEEEECCTTSSHHHHHHH-HHHHHHHTCSCGGGTTCEEEECCCC---CCCCCSSCHHHHHHHHHHHHSSSSCEEEEET
T ss_pred cCCcEEECCCCCcHHHHHHH-HHHHHHhCCcccccccceeEEeeechHhccCccchhHHHHHHHHHHHhhccCCceEEec
Confidence 46899999999999976433 33333322 1222444444433322 23444444433221 122333321
Q ss_pred C---------cc--hHHHHHHHHc-----CCc-EEEEccHHHHHHHHcCCCCCCcceEEEeccchH
Q 015129 145 G---------TS--VREDQRILQA-----GVH-VVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 193 (413)
Q Consensus 145 ~---------~~--~~~~~~~~~~-----~~~-iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~ 193 (413)
. .. .......+.+ ... |.-|||+.+..+.+...-....|..|-++|-..
T Consensus 118 eih~l~~~g~~~g~~~d~a~~Lkp~L~rg~i~vIgatT~eey~~~~e~d~al~rrF~~I~V~Eps~ 183 (268)
T d1r6bx2 118 EIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 183 (268)
T ss_dssp TTTTTTTSCCSSSCHHHHHHHHSSCSSSCCCEEEEEECHHHHHCCCCCTTSSGGGEEEEECCCCCH
T ss_pred chHHHhcCCCCCCccccHHHHhhHHHhCCCCeEEEeCCHHHHHHHHhhcHHHHhhhcccccCCCCH
Confidence 1 11 1112222221 122 556788888777666666677799999999884
No 99
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=91.56 E-value=0.039 Score=41.79 Aligned_cols=18 Identities=33% Similarity=0.669 Sum_probs=15.8
Q ss_pred CCcEEEeCCCCCcchHHh
Q 015129 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~ 94 (413)
+-++++.||+|+|||.++
T Consensus 5 ~~~I~i~G~~GsGKTT~~ 22 (174)
T d1y63a_ 5 GINILITGTPGTGKTSMA 22 (174)
T ss_dssp SCEEEEECSTTSSHHHHH
T ss_pred CCEEEEEeCCCCCHHHHH
Confidence 457999999999999876
No 100
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=91.47 E-value=0.037 Score=40.93 Aligned_cols=15 Identities=20% Similarity=0.373 Sum_probs=13.2
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
++++|++|||||..+
T Consensus 5 Iii~G~pGsGKTTla 19 (152)
T d1ly1a_ 5 ILTIGCPGSGKSTWA 19 (152)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 688999999999864
No 101
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=91.41 E-value=0.048 Score=43.93 Aligned_cols=17 Identities=24% Similarity=0.263 Sum_probs=15.3
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
.++++.||+|+|||..+
T Consensus 36 ~~~Ll~GPpG~GKTtla 52 (239)
T d1ixsb2 36 EHLLLFGPPGLGKTTLA 52 (239)
T ss_dssp CCEEEECCTTSCHHHHH
T ss_pred CeEEEECCCCCCHHHHH
Confidence 57999999999999776
No 102
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=91.21 E-value=0.053 Score=40.90 Aligned_cols=18 Identities=22% Similarity=0.285 Sum_probs=15.0
Q ss_pred CcEEEeCCCCCcchHHhH
Q 015129 78 LDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~ 95 (413)
-++++.||+|||||.++-
T Consensus 5 ~~I~i~G~pGsGKTTia~ 22 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGK 22 (173)
T ss_dssp CCEEEECSTTSSHHHHHH
T ss_pred CEEEEECCCCCCHHHHHH
Confidence 357899999999998763
No 103
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=91.07 E-value=0.55 Score=40.41 Aligned_cols=115 Identities=17% Similarity=0.150 Sum_probs=57.3
Q ss_pred CCcEEEeCCCCCcchHHhHHHHHHccccC-----CCceeEEEEcCcHHHH-----HHHHHHHHHhhccc---CcEEEEEE
Q 015129 77 GLDVIQQAQSGTGKTATFCSGILQQLDYG-----LVQCQALVLAPTRELA-----QQIEKVMRALGDYL---GVKVHACV 143 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~~~~~~~~~~~~-----~~~~~~liv~P~~~l~-----~q~~~~~~~~~~~~---~~~~~~~~ 143 (413)
..|.+++|++|.|||.+.- .+.+.+..+ ..+.+++.+-+..-++ .+|.+++..+.... .-++..+.
T Consensus 43 k~n~llvG~~GvGKtaiv~-~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfi 121 (387)
T d1qvra2 43 KNNPVLIGEPGVGKTAIVE-GLAQRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFI 121 (387)
T ss_dssp CCCCEEEECTTSCHHHHHH-HHHHHHHHTCSCTTSTTCEEEEECC-----------CHHHHHHHHHHHHHTTCSSEEEEE
T ss_pred CCCCeEECCCCCCHHHHHH-HHHHHHHhCCCCHHHcCceEEEeeHhhhhcccCcchhHHHHHHHHHHHhccCCCceEEEe
Confidence 4679999999999997643 333333332 2233455544444333 24555555443221 11222221
Q ss_pred cCc-------------chHHH-HHHHH-cCC-cEEEEccHHHHHHHHcCCCCCCcceEEEeccchH
Q 015129 144 GGT-------------SVRED-QRILQ-AGV-HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADE 193 (413)
Q Consensus 144 ~~~-------------~~~~~-~~~~~-~~~-~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~ 193 (413)
+.. +.... ...+. ... -|.-|||+.+.. +....-...+|..|-|+|-+.
T Consensus 122 de~h~l~~~g~~~g~~d~a~~Lkp~L~rg~~~~I~~tT~~ey~~-~e~d~al~rrF~~v~v~ep~~ 186 (387)
T d1qvra2 122 DELHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTV 186 (387)
T ss_dssp CCC-------------------HHHHHTTCCCEEEEECHHHHHH-HTTCTTTCSCCCCEEECCCCH
T ss_pred ccHHHHhcCCCCCCcccHHHHHHHHHhCCCcceeeecCHHHHHH-hcccHHHHHhcccccCCCCcH
Confidence 111 11010 11112 122 356677888854 566666667799999999884
No 104
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.05 E-value=0.03 Score=45.87 Aligned_cols=18 Identities=28% Similarity=0.314 Sum_probs=15.7
Q ss_pred CCcEEEeCCCCCcchHHh
Q 015129 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~ 94 (413)
.+.+++.||+|+|||..+
T Consensus 38 ~~giLL~GppGtGKT~l~ 55 (258)
T d1e32a2 38 PRGILLYGPPGTGKTLIA 55 (258)
T ss_dssp CCEEEEECCTTSSHHHHH
T ss_pred CceeEEecCCCCCchHHH
Confidence 467999999999999764
No 105
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=91.00 E-value=1.8 Score=33.28 Aligned_cols=74 Identities=12% Similarity=0.197 Sum_probs=54.8
Q ss_pred cccceEEEEccHHHHHHHHHHhhh----CCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcCC-----C-CCCCCCCC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRS----RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL-----L-ARGIDVQQ 347 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~-----~-~~G~d~~~ 347 (413)
.+.+++|.+++++.+..+.+.+.. .+..+...+|+.+..++.+.++ ..+|+|+|+- + ...+++.+
T Consensus 71 ~~~~~lil~pt~~l~~q~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~l~-----~~~IlV~TP~~l~~~l~~~~~~~~~ 145 (208)
T d1hv8a1 71 NGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALK-----NANIVVGTPGRILDHINRGTLNLKN 145 (208)
T ss_dssp SSCCEEEECSCHHHHHHHHHHHHHHHCSSCCCEEEECTTSCHHHHHHHHH-----TCSEEEECHHHHHHHHHTTCSCTTS
T ss_pred cCcceEEEeeccccchhhhhhhhhhcccCCeEEEEeeCCCChHHHHHhcC-----CCCEEEEChHHHHHHHHcCCCCccc
Confidence 445899999999999988777765 3567888888887766554442 4789999962 2 44678889
Q ss_pred CcEEEEccC
Q 015129 348 VSLVINYDL 356 (413)
Q Consensus 348 ~~~vi~~~~ 356 (413)
+.++|..+.
T Consensus 146 l~~lViDEa 154 (208)
T d1hv8a1 146 VKYFILDEA 154 (208)
T ss_dssp CCEEEEETH
T ss_pred CcEEEEECh
Confidence 999887543
No 106
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=90.85 E-value=0.045 Score=41.30 Aligned_cols=16 Identities=31% Similarity=0.389 Sum_probs=14.0
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
-+++.||+|||||.++
T Consensus 4 lI~i~G~~GsGKTTva 19 (176)
T d2bdta1 4 LYIITGPAGVGKSTTC 19 (176)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3789999999999875
No 107
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=90.77 E-value=0.51 Score=34.66 Aligned_cols=72 Identities=15% Similarity=0.302 Sum_probs=52.1
Q ss_pred eeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHH----HHcCCcEEEEccHHHHHHHHcCCCCCCcce
Q 015129 109 CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI----LQAGVHVVVGTPGRVFDMLRRQSLRPDYIK 184 (413)
Q Consensus 109 ~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~iii~T~~~l~~~~~~~~~~~~~~~ 184 (413)
.++||.|+++.-+.++++.+++. +..+..++++......... ......++|+|.. +. .+.++..++
T Consensus 29 ~k~IIF~~s~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~r~~~~~~f~~~~~~ilv~T~~-----~~-~Gid~~~v~ 98 (155)
T d1hv8a2 29 FYGLVFCKTKRDTKELASMLRDI----GFKAGAIHGDLSQSQREKVIRLFKQKKIRILIATDV-----MS-RGIDVNDLN 98 (155)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHT----TCCEEEECSSSCHHHHHHHHHHHHTTSSSEEEECTT-----HH-HHCCCSCCS
T ss_pred CCEEEEECchHHHHHHHhhhccc----ccccccccccchhhhhhhhhhhhhcccceeeeehhH-----Hh-hhhhhccCc
Confidence 38999999999998888888764 7788888988776655443 2356789999932 22 346677788
Q ss_pred EEEecc
Q 015129 185 MFVLDE 190 (413)
Q Consensus 185 ~iV~DE 190 (413)
+||.=+
T Consensus 99 ~Vi~~d 104 (155)
T d1hv8a2 99 CVINYH 104 (155)
T ss_dssp EEEESS
T ss_pred EEEEec
Confidence 887433
No 108
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=90.59 E-value=0.048 Score=41.45 Aligned_cols=20 Identities=20% Similarity=0.346 Sum_probs=17.0
Q ss_pred hcCCcEEEeCCCCCcchHHh
Q 015129 75 CKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 75 ~~~~~~li~~~tGsGKT~~~ 94 (413)
.+|.-++++|++|||||.++
T Consensus 4 ~~g~~I~l~G~~GsGKTTia 23 (183)
T d1m8pa3 4 TQGFTIFLTGYMNSGKDAIA 23 (183)
T ss_dssp TCCEEEEEECSTTSSHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHH
Confidence 45677889999999999886
No 109
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=90.48 E-value=0.039 Score=42.27 Aligned_cols=18 Identities=17% Similarity=0.174 Sum_probs=15.7
Q ss_pred CCcEEEeCCCCCcchHHh
Q 015129 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~ 94 (413)
.+.+++.||+|+|||..+
T Consensus 7 ~K~I~i~G~~GsGKTTla 24 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLV 24 (192)
T ss_dssp CEEEEEECCTTSHHHHHH
T ss_pred ceEEEEECCCCCCHHHHH
Confidence 467999999999999775
No 110
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.21 E-value=0.08 Score=42.57 Aligned_cols=41 Identities=15% Similarity=-0.031 Sum_probs=26.1
Q ss_pred cCCcEEEeCCCCCcchHHhHHHHHHcccc---CCCceeEEEEcC
Q 015129 76 KGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVQCQALVLAP 116 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~~~~~~~~~~~---~~~~~~~liv~P 116 (413)
.|+-+++.||+|+|||..++-.+...... ...+..++++.-
T Consensus 33 ~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~ 76 (251)
T d1szpa2 33 TGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDT 76 (251)
T ss_dssp SSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEES
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEee
Confidence 46789999999999998765544433321 222336666643
No 111
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=90.09 E-value=0.07 Score=43.71 Aligned_cols=17 Identities=29% Similarity=0.380 Sum_probs=15.1
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
+.+++.||+|+|||..+
T Consensus 33 ~~ilL~GpPGtGKT~la 49 (273)
T d1gvnb_ 33 TAFLLGGQPGSGKTSLR 49 (273)
T ss_dssp EEEEEECCTTSCTHHHH
T ss_pred EEEEEECCCCCCHHHHH
Confidence 46899999999999875
No 112
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=89.88 E-value=0.13 Score=42.17 Aligned_cols=42 Identities=17% Similarity=0.039 Sum_probs=28.5
Q ss_pred hhcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCc
Q 015129 74 FCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPT 117 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~ 117 (413)
+..|.-+++.|+||+|||..++-.+.+... ..+.+++|+..-
T Consensus 32 ~~~G~l~vi~G~~G~GKT~~~~~la~~~a~--~~g~~v~~~s~E 73 (277)
T d1cr2a_ 32 ARGGEVIMVTSGSGMGKSTFVRQQALQWGT--AMGKKVGLAMLE 73 (277)
T ss_dssp BCTTCEEEEECSTTSSHHHHHHHHHHHHHH--TSCCCEEEEESS
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHhhhh--hcccceeEeeec
Confidence 455778899999999999766555544322 122378888753
No 113
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=89.34 E-value=0.063 Score=43.50 Aligned_cols=17 Identities=29% Similarity=0.403 Sum_probs=15.0
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
+.+++.||+|+|||..+
T Consensus 41 ~~vLL~GppGtGKT~la 57 (246)
T d1d2na_ 41 VSVLLEGPPHSGKTALA 57 (246)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eEEEEECcCCCCHHHHH
Confidence 46899999999999875
No 114
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=89.22 E-value=0.11 Score=40.07 Aligned_cols=20 Identities=20% Similarity=0.335 Sum_probs=16.6
Q ss_pred CCcEEEeCCCCCcchHHhHH
Q 015129 77 GLDVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~~~ 96 (413)
|-++++.||+|||||.++-.
T Consensus 3 ~~riil~G~pGSGKsT~a~~ 22 (190)
T d1ak2a1 3 GVRAVLLGPPGAGKGTQAPK 22 (190)
T ss_dssp CCEEEEECCTTSSHHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHHH
Confidence 55788999999999988643
No 115
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=89.22 E-value=0.1 Score=38.96 Aligned_cols=18 Identities=17% Similarity=0.233 Sum_probs=15.4
Q ss_pred CcEEEeCCCCCcchHHhH
Q 015129 78 LDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~ 95 (413)
+++++.|++|+|||.++-
T Consensus 1 k~I~liG~~GsGKsTi~k 18 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLAR 18 (161)
T ss_dssp CCEEEECCTTSCHHHHHH
T ss_pred CcEEEECCCCCCHHHHHH
Confidence 578999999999998763
No 116
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.11 E-value=0.11 Score=42.05 Aligned_cols=53 Identities=8% Similarity=-0.036 Sum_probs=30.1
Q ss_pred CcccCCCCHHHHHHHHHCCCCCCcH-HHHhhhhhh-----hcCCcEEEeCCCCCcchHHhH
Q 015129 41 SFDAMGLQENLLRGIYAYGFEKPSA-IQQRGIVPF-----CKGLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 41 ~~~~~~l~~~~~~~l~~~~~~~~~~-~Q~~~~~~i-----~~~~~~li~~~tGsGKT~~~~ 95 (413)
+|+++...+...+.|..+=- -+. .....+... ....++++.||+|+|||.++-
T Consensus 12 ~~~dlig~~~~~~~L~~~l~--~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~ 70 (253)
T d1sxja2 12 NLQQVCGNKGSVMKLKNWLA--NWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAH 70 (253)
T ss_dssp SGGGCCSCHHHHHHHHHHHH--THHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHH
T ss_pred CHHHhcCCHHHHHHHHHHHH--hhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHH
Confidence 57888778777776644100 000 011111111 123579999999999997753
No 117
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.90 E-value=0.11 Score=40.74 Aligned_cols=28 Identities=18% Similarity=-0.058 Sum_probs=21.6
Q ss_pred cCCcEEEeCCCCCcchHHhHHHHHHccc
Q 015129 76 KGLDVIQQAQSGTGKTATFCSGILQQLD 103 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~~~~~~~~~~ 103 (413)
.|.-+++.||+|+|||..++-.+.+...
T Consensus 22 ~G~v~~i~G~~GsGKT~l~l~la~~~~~ 49 (242)
T d1n0wa_ 22 TGSITEMFGEFRTGKTQICHTLAVTCQL 49 (242)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHHHTTS
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3677899999999999877666655443
No 118
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=88.85 E-value=0.12 Score=41.14 Aligned_cols=39 Identities=18% Similarity=0.032 Sum_probs=25.8
Q ss_pred cCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcC
Q 015129 76 KGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAP 116 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P 116 (413)
.|.-+++.|++|+|||..++-.+......+. .+++++..
T Consensus 25 ~G~~~~I~G~~G~GKT~la~~~~~~~~~~~~--~~~~~~s~ 63 (242)
T d1tf7a1 25 IGRSTLVSGTSGTGKTLFSIQFLYNGIIEFD--EPGVFVTF 63 (242)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHHHC--CCEEEEES
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhcC--CCcccccc
Confidence 4678899999999999776544443333222 16777665
No 119
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=88.68 E-value=0.092 Score=39.58 Aligned_cols=18 Identities=22% Similarity=0.259 Sum_probs=15.3
Q ss_pred CCcEEEeCCCCCcchHHh
Q 015129 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~ 94 (413)
.+-+++.|++|||||.++
T Consensus 3 ~kiI~l~G~~GsGKsTva 20 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIV 20 (178)
T ss_dssp CCEEEEECCTTSSHHHHH
T ss_pred CeEEEEECCCCCCHHHHH
Confidence 456789999999999876
No 120
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=88.52 E-value=0.079 Score=45.11 Aligned_cols=19 Identities=26% Similarity=0.267 Sum_probs=16.5
Q ss_pred cCCcEEEeCCCCCcchHHh
Q 015129 76 KGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~ 94 (413)
.++++++.||+|+|||..+
T Consensus 27 ~~h~vLl~G~pG~GKT~la 45 (333)
T d1g8pa_ 27 GIGGVLVFGDRGTGKSTAV 45 (333)
T ss_dssp GGCCEEEECCGGGCTTHHH
T ss_pred CCCeEEEECCCCccHHHHH
Confidence 4578999999999999764
No 121
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=88.35 E-value=0.12 Score=39.39 Aligned_cols=17 Identities=18% Similarity=0.296 Sum_probs=14.7
Q ss_pred cEEEeCCCCCcchHHhH
Q 015129 79 DVIQQAQSGTGKTATFC 95 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~~ 95 (413)
++++.||+|||||..+-
T Consensus 2 ~I~i~G~pGSGKsT~a~ 18 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAE 18 (182)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999998864
No 122
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=88.13 E-value=0.093 Score=39.41 Aligned_cols=18 Identities=28% Similarity=0.270 Sum_probs=14.9
Q ss_pred CcEEEeCCCCCcchHHhH
Q 015129 78 LDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~ 95 (413)
+-+++.|++|||||..+-
T Consensus 7 ~iivl~G~~GsGKsT~a~ 24 (171)
T d1knqa_ 7 HIYVLMGVSGSGKSAVAS 24 (171)
T ss_dssp EEEEEECSTTSCHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 447889999999998763
No 123
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=88.00 E-value=0.098 Score=39.91 Aligned_cols=18 Identities=22% Similarity=0.329 Sum_probs=15.2
Q ss_pred cEEEeCCCCCcchHHhHH
Q 015129 79 DVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~~~ 96 (413)
++++.||+|||||..+-.
T Consensus 2 ~I~i~G~pGsGKsT~a~~ 19 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVK 19 (181)
T ss_dssp EEEEECCTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 578999999999988643
No 124
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=87.97 E-value=0.3 Score=40.42 Aligned_cols=53 Identities=21% Similarity=0.147 Sum_probs=39.2
Q ss_pred eeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcCCcEEEEc
Q 015129 109 CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGT 165 (413)
Q Consensus 109 ~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~T 165 (413)
++++|.||+..-+.+++..+++. +..|..++|.....+.........+|+|+|
T Consensus 37 g~~~~F~~s~~~~~~~a~~L~~~----g~~V~~l~~~~~~~e~~~~~~~~~~~~~~t 89 (299)
T d1yksa2 37 RPTAWFLPSIRAANVMAASLRKA----GKSVVVLNRKTFEREYPTIKQKKPDFILAT 89 (299)
T ss_dssp SCEEEECSCHHHHHHHHHHHHHT----TCCEEECCSSSCC--------CCCSEEEES
T ss_pred CCEEEEeCCHHHHHHHHHHHHhc----CCeEEEEcCcCcHhHHhhhhcCCcCEEEEe
Confidence 38999999999999998888874 667889999887777666677788999999
No 125
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=87.67 E-value=0.14 Score=39.10 Aligned_cols=18 Identities=17% Similarity=0.296 Sum_probs=15.0
Q ss_pred cEEEeCCCCCcchHHhHH
Q 015129 79 DVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~~~ 96 (413)
.+++.||+|||||..+-.
T Consensus 2 ~I~i~G~pGSGKsT~a~~ 19 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADR 19 (182)
T ss_dssp EEEEECSTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 478999999999988643
No 126
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=87.58 E-value=0.31 Score=35.12 Aligned_cols=65 Identities=20% Similarity=0.254 Sum_probs=47.8
Q ss_pred eeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEE
Q 015129 109 CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFV 187 (413)
Q Consensus 109 ~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV 187 (413)
.++||.|+++.-++++++.+++. ++.+..++++...... .....+++|||. .+. .+++ .+++.||
T Consensus 36 ~k~IVFc~t~~~ae~la~~L~~~----G~~~~~~H~~~~~~~~---~~~~~~vlvaTd-----~~~-~GiD-~~v~~Vi 100 (138)
T d1jr6a_ 36 GRHLIFCHSKKKCDELAAKLVAL----GINAVAYYRGLDVSVI---PTNGDVVVVATD-----ALM-TGFT-GDFDSVI 100 (138)
T ss_dssp SCEEEECSCHHHHHHHHHHHHHH----TCEEEEECTTCCSCCC---TTSSCEEEEESS-----SSC-SSSC-CCBSEEE
T ss_pred CCEEEEeCcHHHHHHHHHHHhcc----ccchhhhhccchhhhh---hhhhcceeehhH-----HHH-hccc-cccceEE
Confidence 38999999999999999888775 7888889988774432 235678999993 333 3455 5577765
No 127
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=87.52 E-value=0.098 Score=39.81 Aligned_cols=17 Identities=18% Similarity=0.124 Sum_probs=14.5
Q ss_pred cEEEeCCCCCcchHHhH
Q 015129 79 DVIQQAQSGTGKTATFC 95 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~~ 95 (413)
++++.||+|||||..+-
T Consensus 2 ~I~i~G~pGSGKsT~~~ 18 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQ 18 (179)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47889999999998863
No 128
>d2eyqa2 c.37.1.19 (A:349-465) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=87.36 E-value=0.71 Score=31.99 Aligned_cols=75 Identities=13% Similarity=0.030 Sum_probs=56.1
Q ss_pred HHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCCC
Q 015129 267 LETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 346 (413)
Q Consensus 267 ~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~~G~d~~ 346 (413)
++.|...++. ..+++|+.|.+...++.+.+.|...++.+..+.+.. .+..+ .+.|+..-+..|+-++
T Consensus 23 ~~~L~~~i~~-~~~~Vli~a~s~g~~erl~e~L~~~~i~~~~~~~~~----------~~~~~--~~~i~~~~l~~GF~~~ 89 (117)
T d2eyqa2 23 LDALRKFLET-FDGPVVFSVESEGRREALGELLARIKIAPQRIMRLD----------EASDR--GRYLMIGAAEHGFVDT 89 (117)
T ss_dssp THHHHHHHTT-CCSCCCEEESSHHHHHHHHHHHGGGTCCCEECSSGG----------GCCTT--CCEEEECCCCSCEEET
T ss_pred HHHHHHHHHh-CCCeEEEEECCccHHHHHHHHHHHcCCCceEecChh----------hhcCc--eEEEEEecCccccccC
Confidence 4556666654 346899999999999999999999999887765431 12333 3567778899999988
Q ss_pred CCcEEEEc
Q 015129 347 QVSLVINY 354 (413)
Q Consensus 347 ~~~~vi~~ 354 (413)
....+|+.
T Consensus 90 ~~~l~vIt 97 (117)
T d2eyqa2 90 VRNLALIC 97 (117)
T ss_dssp TTTEEEEE
T ss_pred CCCEEEEE
Confidence 88888864
No 129
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=87.20 E-value=0.18 Score=37.87 Aligned_cols=19 Identities=16% Similarity=0.097 Sum_probs=15.7
Q ss_pred CcEEEeCCCCCcchHHhHH
Q 015129 78 LDVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~~ 96 (413)
+.+++.|++|+|||.++-.
T Consensus 3 ~~Iil~G~~GsGKSTia~~ 21 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRE 21 (170)
T ss_dssp CCEEEESCTTSSHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHH
Confidence 5678999999999987643
No 130
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=87.19 E-value=0.17 Score=39.08 Aligned_cols=22 Identities=18% Similarity=0.176 Sum_probs=18.0
Q ss_pred hhcCCcEEEeCCCCCcchHHhH
Q 015129 74 FCKGLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~~ 95 (413)
+.+++-+++.||+|||||..+-
T Consensus 5 ~~~~~iI~l~G~pGSGKsT~a~ 26 (194)
T d3adka_ 5 LKKSKIIFVVGGPGSGKGTQCE 26 (194)
T ss_dssp HHTSCEEEEEECTTSSHHHHHH
T ss_pred ccCCcEEEEECCCCCCHHHHHH
Confidence 4456778999999999998764
No 131
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=86.94 E-value=0.19 Score=38.67 Aligned_cols=19 Identities=21% Similarity=0.270 Sum_probs=15.9
Q ss_pred CcEEEeCCCCCcchHHhHH
Q 015129 78 LDVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~~ 96 (413)
-++++.||+|||||..+-.
T Consensus 7 mrIiliG~PGSGKtT~a~~ 25 (189)
T d2ak3a1 7 LRAAIMGAPGSGKGTVSSR 25 (189)
T ss_dssp CEEEEECCTTSSHHHHHHH
T ss_pred eeEEEECCCCCCHHHHHHH
Confidence 4688999999999988643
No 132
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.93 E-value=0.13 Score=38.99 Aligned_cols=17 Identities=24% Similarity=0.302 Sum_probs=14.2
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
.-++++|++|||||..+
T Consensus 15 ~liil~G~pGsGKST~a 31 (172)
T d1yj5a2 15 EVVVAVGFPGAGKSTFI 31 (172)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred EEEEEECCCCCCHHHHH
Confidence 45799999999999754
No 133
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.88 E-value=0.068 Score=41.22 Aligned_cols=19 Identities=37% Similarity=0.398 Sum_probs=15.4
Q ss_pred CCcEEEeCCCCCcchHHhH
Q 015129 77 GLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~~ 95 (413)
|.-++++|++|||||.++-
T Consensus 19 g~vI~L~G~pGSGKTTiAk 37 (195)
T d1x6va3 19 GCTVWLTGLSGAGKTTVSM 37 (195)
T ss_dssp CEEEEEESSCHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4466789999999998763
No 134
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=86.78 E-value=0.15 Score=39.10 Aligned_cols=18 Identities=22% Similarity=0.314 Sum_probs=15.2
Q ss_pred CcEEEeCCCCCcchHHhH
Q 015129 78 LDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~ 95 (413)
-.+++.||+|||||..+-
T Consensus 4 m~I~i~GppGsGKsT~a~ 21 (189)
T d1zaka1 4 LKVMISGAPASGKGTQCE 21 (189)
T ss_dssp CCEEEEESTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 358999999999998764
No 135
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=86.64 E-value=0.14 Score=38.87 Aligned_cols=17 Identities=24% Similarity=0.286 Sum_probs=14.6
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
+-+++.|++|||||...
T Consensus 2 kiI~i~G~~GsGKsT~~ 18 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSS 18 (190)
T ss_dssp CEEEEECCTTSCHHHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 55789999999999775
No 136
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=86.58 E-value=0.15 Score=41.14 Aligned_cols=27 Identities=15% Similarity=-0.047 Sum_probs=21.4
Q ss_pred cCCcEEEeCCCCCcchHHhHHHHHHcc
Q 015129 76 KGLDVIQQAQSGTGKTATFCSGILQQL 102 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~~~~~~~~~ 102 (413)
.|+-+++.||+|+|||..++-.+.+..
T Consensus 35 ~G~~~li~G~pGsGKT~~~lq~~~~~~ 61 (254)
T d1pzna2 35 TQAITEVFGEFGSGKTQLAHTLAVMVQ 61 (254)
T ss_dssp SSEEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHHhh
Confidence 356789999999999988776666554
No 137
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.39 E-value=0.19 Score=40.36 Aligned_cols=50 Identities=10% Similarity=-0.088 Sum_probs=30.8
Q ss_pred cCCcEEEeCCCCCcchHHhHHHHHHccccCC---CceeEEEEcCcHHHHHHHH
Q 015129 76 KGLDVIQQAQSGTGKTATFCSGILQQLDYGL---VQCQALVLAPTRELAQQIE 125 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~---~~~~~liv~P~~~l~~q~~ 125 (413)
.|+-+++.|++|+|||..++-.+.+...... ....++++.........+.
T Consensus 36 ~G~~~~i~G~~GsGKT~lalq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (258)
T d1v5wa_ 36 SMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRL 88 (258)
T ss_dssp SSEEEEEECCTTCTHHHHHHHHHHHTTSCBTTTBCCCEEEEEESSSCCCHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHhhhhcccccceEEEechHHHHHHHHH
Confidence 4677899999999999887666655443221 2235565555444333333
No 138
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=86.29 E-value=0.18 Score=38.04 Aligned_cols=23 Identities=30% Similarity=0.560 Sum_probs=16.4
Q ss_pred cEEEeCCCCCcchHHhHHHHHHcc
Q 015129 79 DVIQQAQSGTGKTATFCSGILQQL 102 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~~~~~~~~~ 102 (413)
++++.||+|+|||..+ ..++..+
T Consensus 2 ki~I~G~~G~GKSTLl-~~i~~~l 24 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLV-KKIVERL 24 (178)
T ss_dssp EEEEECCTTSSHHHHH-HHHHHHH
T ss_pred EEEEECCCCcHHHHHH-HHHHhcC
Confidence 4799999999999753 3344333
No 139
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=86.29 E-value=0.28 Score=39.83 Aligned_cols=39 Identities=18% Similarity=0.064 Sum_probs=27.6
Q ss_pred cCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCc
Q 015129 76 KGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPT 117 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~ 117 (413)
.|+-+.+.+|+|+|||..++..+......+ ..++|+---
T Consensus 53 ~g~itei~G~~gsGKTtl~l~~~~~~q~~g---~~~vyidtE 91 (263)
T d1u94a1 53 MGRIVEIYGPESSGKTTLTLQVIAAAQREG---KTCAFIDAE 91 (263)
T ss_dssp TTSEEEEECSTTSSHHHHHHHHHHHHHHTT---CCEEEEESS
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHHHcCC---CEEEEEccc
Confidence 356789999999999988776666654433 366665543
No 140
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.19 E-value=0.73 Score=36.16 Aligned_cols=73 Identities=14% Similarity=0.125 Sum_probs=53.8
Q ss_pred ccceEEEEccHHHHHHHHHHhhhC----CCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcCC------CCCCCCCCCC
Q 015129 279 ITQSVIFVNTRRKVDWLTDKMRSR----DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL------LARGIDVQQV 348 (413)
Q Consensus 279 ~~~~lif~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~------~~~G~d~~~~ 348 (413)
..+++|++++++-+..+++.+... +..+..+.|+.+..+....++ . ..+|+|+|+- -...+++.++
T Consensus 85 ~~~~lil~PtreLa~Qi~~~~~~l~~~~~i~~~~~~g~~~~~~~~~~l~---~-~~~Ilv~TPgrl~~~~~~~~~~~~~l 160 (222)
T d2j0sa1 85 ETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLD---Y-GQHVVAGTPGRVFDMIRRRSLRTRAI 160 (222)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECTTSCHHHHHHHHH---H-CCSEEEECHHHHHHHHHTTSSCCTTC
T ss_pred CceeEEecchHHHHHHHHHHHHHHhCccceeEEEEeecccchhhHHHhc---c-CCeEEeCCCCcHHhcccccccccccc
Confidence 347899999999999988877653 567888888877665544432 2 4689999972 3567788899
Q ss_pred cEEEEcc
Q 015129 349 SLVINYD 355 (413)
Q Consensus 349 ~~vi~~~ 355 (413)
.++|...
T Consensus 161 ~~lVlDE 167 (222)
T d2j0sa1 161 KMLVLDE 167 (222)
T ss_dssp CEEEEET
T ss_pred eeeeecc
Confidence 9988654
No 141
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.74 E-value=0.2 Score=38.05 Aligned_cols=17 Identities=18% Similarity=0.251 Sum_probs=14.6
Q ss_pred cEEEeCCCCCcchHHhH
Q 015129 79 DVIQQAQSGTGKTATFC 95 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~~ 95 (413)
.+++.||+|||||..+-
T Consensus 4 rIvl~G~pGSGKtT~a~ 20 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAP 20 (180)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 57889999999998863
No 142
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=85.72 E-value=0.81 Score=36.58 Aligned_cols=21 Identities=29% Similarity=0.447 Sum_probs=17.5
Q ss_pred hhcCCcEEEeCCCCCcchHHh
Q 015129 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~ 94 (413)
...+..++|.|++|+|||.++
T Consensus 20 a~~~~pvlI~Ge~GtGK~~~A 40 (247)
T d1ny5a2 20 SCAECPVLITGESGVGKEVVA 40 (247)
T ss_dssp TTCCSCEEEECSTTSSHHHHH
T ss_pred hCCCCCEEEECCCCcCHHHHH
Confidence 345788999999999999765
No 143
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.69 E-value=0.23 Score=38.28 Aligned_cols=18 Identities=17% Similarity=0.202 Sum_probs=14.8
Q ss_pred cEEEeCCCCCcchHHhHH
Q 015129 79 DVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~~~ 96 (413)
-+++.||+|||||..+-.
T Consensus 10 iI~i~GppGSGKsT~a~~ 27 (196)
T d1ukza_ 10 VIFVLGGPGAGKGTQCEK 27 (196)
T ss_dssp EEEEECSTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 478899999999987643
No 144
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=85.63 E-value=0.33 Score=36.00 Aligned_cols=15 Identities=47% Similarity=0.508 Sum_probs=13.0
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+.++|+.|||||...
T Consensus 5 i~itG~~GSGKTTL~ 19 (170)
T d1np6a_ 5 LAFAAWSGTGKTTLL 19 (170)
T ss_dssp EEEECCTTSCHHHHH
T ss_pred EEEEcCCCCCHHHHH
Confidence 578999999999764
No 145
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=85.56 E-value=0.18 Score=40.42 Aligned_cols=28 Identities=14% Similarity=0.070 Sum_probs=22.6
Q ss_pred cCCcEEEeCCCCCcchHHhHHHHHHccc
Q 015129 76 KGLDVIQQAQSGTGKTATFCSGILQQLD 103 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~~~~~~~~~~ 103 (413)
.|.-+++.|++|+|||..++-.+.+...
T Consensus 33 ~G~l~~i~G~~G~GKT~~~l~~a~~~~~ 60 (258)
T d2i1qa2 33 SQSVTEFAGVFGSGKTQIMHQSCVNLQN 60 (258)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHHTTC
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 4677899999999999888777766654
No 146
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=85.16 E-value=0.2 Score=38.54 Aligned_cols=18 Identities=22% Similarity=0.231 Sum_probs=15.0
Q ss_pred CcEEEeCCCCCcchHHhH
Q 015129 78 LDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~ 95 (413)
.-+++.||+|||||.++-
T Consensus 7 ~iI~i~G~pGSGKsT~a~ 24 (194)
T d1qf9a_ 7 NVVFVLGGPGSGKGTQCA 24 (194)
T ss_dssp EEEEEEESTTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 357899999999998763
No 147
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=85.02 E-value=0.3 Score=41.71 Aligned_cols=19 Identities=16% Similarity=0.053 Sum_probs=16.1
Q ss_pred CCcEEEeCCCCCcchHHhH
Q 015129 77 GLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~~ 95 (413)
++.+++.||+|+|||..+.
T Consensus 154 ~~~~~~~g~~~~gk~~~~~ 172 (362)
T d1svma_ 154 KRYWLFKGPIDSGKTTLAA 172 (362)
T ss_dssp CCEEEEECSTTSSHHHHHH
T ss_pred cCeEEEECCCCCCHHHHHH
Confidence 4679999999999997753
No 148
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.96 E-value=0.23 Score=38.17 Aligned_cols=17 Identities=24% Similarity=0.286 Sum_probs=14.5
Q ss_pred cEEEeCCCCCcchHHhH
Q 015129 79 DVIQQAQSGTGKTATFC 95 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~~ 95 (413)
-+++.||+|||||..+-
T Consensus 3 iI~i~GppGSGKsT~a~ 19 (194)
T d1teva_ 3 VVFVLGGPGAGKGTQCA 19 (194)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 36899999999998863
No 149
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=84.46 E-value=0.31 Score=38.10 Aligned_cols=34 Identities=15% Similarity=0.159 Sum_probs=21.8
Q ss_pred CcEEEeCC-CCCcchHHhHHHHHHccccCCCceeEEEE
Q 015129 78 LDVIQQAQ-SGTGKTATFCSGILQQLDYGLVQCQALVL 114 (413)
Q Consensus 78 ~~~li~~~-tGsGKT~~~~~~~~~~~~~~~~~~~~liv 114 (413)
++++|++- ||.|||.+....+......+. +++++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~---rVl~i 36 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGY---RTAGY 36 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTC---CEEEE
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCC---eEEEE
Confidence 45666666 799999887554444333333 77775
No 150
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=84.41 E-value=0.22 Score=37.91 Aligned_cols=18 Identities=28% Similarity=0.401 Sum_probs=15.5
Q ss_pred CCcEEEeCCCCCcchHHh
Q 015129 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~ 94 (413)
|+-++++||.|+|||...
T Consensus 2 G~iivl~GpsG~GK~tl~ 19 (182)
T d1znwa1 2 GRVVVLSGPSAVGKSTVV 19 (182)
T ss_dssp CCEEEEECSTTSSHHHHH
T ss_pred CeEEEEECCCCCCHHHHH
Confidence 566899999999999764
No 151
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=84.17 E-value=0.31 Score=36.27 Aligned_cols=18 Identities=17% Similarity=0.219 Sum_probs=14.7
Q ss_pred cEEEeCCCCCcchHHhHH
Q 015129 79 DVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~~~ 96 (413)
++++.|++|+|||.++-.
T Consensus 3 ~IvliG~~G~GKSTig~~ 20 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRR 20 (165)
T ss_dssp SEEEECSTTSSHHHHHHH
T ss_pred cEEEECCCCCCHHHHHHH
Confidence 467889999999988643
No 152
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=84.05 E-value=0.17 Score=41.49 Aligned_cols=15 Identities=27% Similarity=0.202 Sum_probs=12.7
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+++.||+|+|||.+.
T Consensus 49 l~l~GppGtGKT~l~ 63 (287)
T d1w5sa2 49 YGSIGRVGIGKTTLA 63 (287)
T ss_dssp EECTTCCSSSHHHHH
T ss_pred EEeECCCCCCHHHHH
Confidence 466899999999875
No 153
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=83.66 E-value=0.39 Score=39.09 Aligned_cols=62 Identities=19% Similarity=0.189 Sum_probs=37.8
Q ss_pred hhhhhhcCCcEEEeCCCCCcchHHhHHHHHHccccC--------CCceeEEEEcCcHHHHHHHHHHHHHhhc
Q 015129 70 GIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYG--------LVQCQALVLAPTRELAQQIEKVMRALGD 133 (413)
Q Consensus 70 ~~~~i~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~--------~~~~~~liv~P~~~l~~q~~~~~~~~~~ 133 (413)
+++-+..|.-.++.|++|+|||..++..++. +..+ ....+++|+.-- .-..++.+++..+..
T Consensus 22 li~G~~pg~~~~i~G~~G~GKS~l~l~la~~-ia~g~~~~~~~~~~~~~vl~~~~E-~~~~~~~~Rl~~~~~ 91 (274)
T d1nlfa_ 22 VLPNMVAGTVGALVSPGGAGKSMLALQLAAQ-IAGGPDLLEVGELPTGPVIYLPAE-DPPTAIHHRLHALGA 91 (274)
T ss_dssp EETTEETTSEEEEEESTTSSHHHHHHHHHHH-HHTCCCTTCCCCCCCCCEEEEESS-SCHHHHHHHHHHHHT
T ss_pred HhCCccCCcEEEEEeCCCCCHHHHHHHHHHH-HHcCCCcccccccCCCceEEEecc-chHHHHHHHHHHHhh
Confidence 4555666888899999999999776554443 2221 123367776542 234455566665543
No 154
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.48 E-value=0.24 Score=37.83 Aligned_cols=17 Identities=29% Similarity=0.507 Sum_probs=14.6
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
+-++++||+|+|||...
T Consensus 2 rpIvl~GpsG~GK~tl~ 18 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLL 18 (186)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred CeEEEECCCCCCHHHHH
Confidence 45899999999999764
No 155
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=83.26 E-value=0.41 Score=38.17 Aligned_cols=21 Identities=24% Similarity=0.264 Sum_probs=17.5
Q ss_pred hhcCCcEEEeCCCCCcchHHh
Q 015129 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~ 94 (413)
+..|..+.|+||+|||||...
T Consensus 26 i~~Ge~vaIvG~sGsGKSTLl 46 (241)
T d2pmka1 26 IKQGEVIGIVGRSGSGKSTLT 46 (241)
T ss_dssp EETTCEEEEECSTTSSHHHHH
T ss_pred EcCCCEEEEECCCCCCHHHHH
Confidence 345899999999999999653
No 156
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=83.10 E-value=0.27 Score=38.28 Aligned_cols=19 Identities=37% Similarity=0.494 Sum_probs=16.2
Q ss_pred cCCcEEEeCCCCCcchHHh
Q 015129 76 KGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~ 94 (413)
+|+-++++||.|+|||...
T Consensus 1 ~G~livi~GPSG~GK~tl~ 19 (205)
T d1s96a_ 1 QGTLYIVSAPSGAGKSSLI 19 (205)
T ss_dssp CCCEEEEECCTTSCHHHHH
T ss_pred CCeEEEEECCCCCCHHHHH
Confidence 4677899999999999764
No 157
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.89 E-value=0.35 Score=39.35 Aligned_cols=18 Identities=28% Similarity=0.272 Sum_probs=15.9
Q ss_pred CCcEEEeCCCCCcchHHh
Q 015129 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~ 94 (413)
.+.+++.||+|+|||..+
T Consensus 41 ~~giLL~Gp~GtGKT~l~ 58 (265)
T d1r7ra3 41 SKGVLFYGPPGCGKTLLA 58 (265)
T ss_dssp CCEEEEBCCTTSSHHHHH
T ss_pred CCeEEEECCCCCcchhHH
Confidence 567999999999999875
No 158
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.25 E-value=0.48 Score=38.04 Aligned_cols=21 Identities=19% Similarity=0.241 Sum_probs=17.6
Q ss_pred hhcCCcEEEeCCCCCcchHHh
Q 015129 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~ 94 (413)
+..|..+.++||+|||||...
T Consensus 37 i~~Ge~vaivG~sGsGKSTLl 57 (251)
T d1jj7a_ 37 LRPGEVTALVGPNGSGKSTVA 57 (251)
T ss_dssp ECTTCEEEEECSTTSSHHHHH
T ss_pred EcCCCEEEEECCCCCcHHHHH
Confidence 345889999999999999754
No 159
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.69 E-value=0.4 Score=40.25 Aligned_cols=24 Identities=25% Similarity=0.469 Sum_probs=18.7
Q ss_pred hhhhhcCCc--EEEeCCCCCcchHHh
Q 015129 71 IVPFCKGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 71 ~~~i~~~~~--~li~~~tGsGKT~~~ 94 (413)
++.+++|.+ ++.-|+||||||++.
T Consensus 68 v~~~l~G~n~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 68 VKDVLEGYNGTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp HHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHcCCCcceeeecccCCCCceec
Confidence 444556765 688999999999885
No 160
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=81.52 E-value=0.32 Score=37.28 Aligned_cols=16 Identities=31% Similarity=0.557 Sum_probs=14.0
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
-+++.||+|+|||..+
T Consensus 2 pIvl~GPsGsGK~tl~ 17 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLL 17 (190)
T ss_dssp CEEEECCTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 4789999999999864
No 161
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=80.99 E-value=0.61 Score=36.91 Aligned_cols=22 Identities=27% Similarity=0.353 Sum_probs=15.8
Q ss_pred EEEeCCCCCcchHHhHHHHHHcc
Q 015129 80 VIQQAQSGTGKTATFCSGILQQL 102 (413)
Q Consensus 80 ~li~~~tGsGKT~~~~~~~~~~~ 102 (413)
+++.|+.|+|||.. +-.+++..
T Consensus 3 i~v~G~~GsGKTTL-l~~ll~~~ 24 (244)
T d1yrba1 3 VVFVGTAGSGKTTL-TGEFGRYL 24 (244)
T ss_dssp EEEECSTTSSHHHH-HHHHHHHH
T ss_pred EEEEcCCCCcHHHH-HHHHHHHH
Confidence 57899999999965 44444443
No 162
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.85 E-value=1.7 Score=33.49 Aligned_cols=74 Identities=8% Similarity=0.170 Sum_probs=52.9
Q ss_pred cceEEEEccHHHHHHHHHHhhhCC-----CeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcCC------CCCCCCCCCC
Q 015129 280 TQSVIFVNTRRKVDWLTDKMRSRD-----HTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL------LARGIDVQQV 348 (413)
Q Consensus 280 ~~~lif~~~~~~~~~l~~~L~~~~-----~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~------~~~G~d~~~~ 348 (413)
.+++|.+++++.+..+.+.++..+ ..+....|+.+...... .+.....+|||+|+- -...+++.++
T Consensus 70 ~~~lil~PtreL~~qi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~l~~~~~~ilI~TP~rl~~~~~~~~~~l~~l 146 (207)
T d1t6na_ 70 VSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEE---VLKKNCPHIVVGTPGRILALARNKSLNLKHI 146 (207)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHHTTTSTTCCEEEESCCSCHHHHHH---HHHHSCCSEEEECHHHHHHHHHTTSSCCTTC
T ss_pred ceEEEEeccchhhHHHHHHHHHHHhhCCCceeEEEeccccHHHHHH---HHHhcCCCEEEeCcchhhhhccCCceecccc
Confidence 479999999999988888886532 34667777776554433 334567889999982 2346788899
Q ss_pred cEEEEccC
Q 015129 349 SLVINYDL 356 (413)
Q Consensus 349 ~~vi~~~~ 356 (413)
.++|....
T Consensus 147 ~~lVlDEa 154 (207)
T d1t6na_ 147 KHFILDEC 154 (207)
T ss_dssp CEEEEESH
T ss_pred ceeehhhh
Confidence 99886643
No 163
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=80.82 E-value=0.75 Score=37.26 Aligned_cols=43 Identities=16% Similarity=0.155 Sum_probs=29.0
Q ss_pred hcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHH
Q 015129 75 CKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120 (413)
Q Consensus 75 ~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l 120 (413)
..|+-..+.+|.|+|||..++..+......+ ..++|+---..+
T Consensus 58 ~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g---~~~vyIDtE~~~ 100 (269)
T d1mo6a1 58 PRGRVIEIYGPESSGKTTVALHAVANAQAAG---GVAAFIDAEHAL 100 (269)
T ss_dssp CSSSEEEEECSSSSSHHHHHHHHHHHHHHTT---CEEEEEESSCCC
T ss_pred ccceeEEEecCCCcHHHHHHHHHHHHHhcCC---CEEEEEECCccC
Confidence 3467789999999999988766665544333 366665543333
No 164
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=80.11 E-value=2.1 Score=33.56 Aligned_cols=96 Identities=15% Similarity=0.188 Sum_probs=58.2
Q ss_pred EEeccccchHHHHHH--HHHhhcccceEEEEccHHHHHHHHHHhhh----CCC----eeEEecCCCCHHHHHHHHHHHhc
Q 015129 258 VNVEKEEWKLETLCD--LYETLAITQSVIFVNTRRKVDWLTDKMRS----RDH----TVSATHGDMDQNTRDIIMREFRS 327 (413)
Q Consensus 258 ~~~~~~~~~~~~l~~--~~~~~~~~~~lif~~~~~~~~~l~~~L~~----~~~----~~~~~~~~~~~~~r~~~~~~f~~ 327 (413)
...++..+|.....- +.....++++++.+|++.-+...++.+++ .+. .+..+++..+...+.+.++..
T Consensus 63 i~apTGsGKT~~~~~~~~~~~~~~~rvliv~Pt~~La~Q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 140 (237)
T d1gkub1 63 ATAPTGVGKTSFGLAMSLFLALKGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNL-- 140 (237)
T ss_dssp CCCCBTSCSHHHHHHHHHHHHTTSCCEEEEESCHHHHHHHHHHHHHHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSG--
T ss_pred EEecCCChHHHHHHHHHHHHHHhcCeEEEEeccHHHHHHHHHHHHHHHHHcCCceEEEEeeeecccchhhhhhhhccc--
Confidence 334555555533222 11223567999999999998888877764 232 244566666666666655533
Q ss_pred CCCcEEEEcC-CCCC-CCCCCCCcEEEEcc
Q 015129 328 GSSRVLITTD-LLAR-GIDVQQVSLVINYD 355 (413)
Q Consensus 328 ~~~~vli~t~-~~~~-G~d~~~~~~vi~~~ 355 (413)
...+|+|+|+ .+.. -.++..+++||...
T Consensus 141 ~~~~Ilv~Tp~~l~~~~~~~~~~~~vVvDE 170 (237)
T d1gkub1 141 RNFKIVITTTQFLSKHYRELGHFDFIFVDD 170 (237)
T ss_dssp GGCSEEEEEHHHHHHCSTTSCCCSEEEESC
T ss_pred cccceeccChHHHHHhhhhcCCCCEEEEEC
Confidence 3567999986 2222 23456788887654
No 165
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=79.98 E-value=0.66 Score=36.55 Aligned_cols=28 Identities=32% Similarity=0.355 Sum_probs=20.3
Q ss_pred hhcCCcEEEeCCCCCcchHHhHHHHHHccc
Q 015129 74 FCKGLDVIQQAQSGTGKTATFCSGILQQLD 103 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~~~~~~~~~~ 103 (413)
+.+|..+.+.||.|+|||.. +-++.-+.
T Consensus 28 i~~Ge~~~iiG~sGsGKSTL--l~~i~gl~ 55 (230)
T d1l2ta_ 28 IKEGEFVSIMGPSGSGKSTM--LNIIGCLD 55 (230)
T ss_dssp ECTTCEEEEECSTTSSHHHH--HHHHTTSS
T ss_pred EcCCCEEEEECCCCCCcchh--hHhccCCC
Confidence 34688999999999999964 33444443
No 166
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=79.98 E-value=0.32 Score=36.92 Aligned_cols=15 Identities=27% Similarity=0.417 Sum_probs=13.0
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+++.|++|+|||.++
T Consensus 4 ivi~G~~GsGKTT~~ 18 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVL 18 (194)
T ss_dssp EEEEECTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 578999999999775
No 167
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=79.80 E-value=0.61 Score=37.15 Aligned_cols=20 Identities=25% Similarity=0.290 Sum_probs=16.8
Q ss_pred hcCCcEEEeCCCCCcchHHh
Q 015129 75 CKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 75 ~~~~~~li~~~tGsGKT~~~ 94 (413)
..|..+.++||+|+|||..+
T Consensus 26 ~~Ge~vaivG~sGsGKSTLl 45 (242)
T d1mv5a_ 26 QPNSIIAFAGPSGGGKSTIF 45 (242)
T ss_dssp CTTEEEEEECCTTSSHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHH
Confidence 45888999999999999643
No 168
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=79.74 E-value=0.33 Score=37.10 Aligned_cols=14 Identities=29% Similarity=0.131 Sum_probs=12.2
Q ss_pred EEeCCCCCcchHHh
Q 015129 81 IQQAQSGTGKTATF 94 (413)
Q Consensus 81 li~~~tGsGKT~~~ 94 (413)
-|.||+|||||..+
T Consensus 26 gI~G~~GSGKSTla 39 (198)
T d1rz3a_ 26 GIDGLSRSGKTTLA 39 (198)
T ss_dssp EEEECTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 48999999999765
No 169
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=79.47 E-value=2.8 Score=33.95 Aligned_cols=77 Identities=22% Similarity=0.276 Sum_probs=50.6
Q ss_pred CCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchH--------H----HHHHHHcCCcEEEEccHHHHHHH
Q 015129 106 LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR--------E----DQRILQAGVHVVVGTPGRVFDML 173 (413)
Q Consensus 106 ~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~~~~~iii~T~~~l~~~~ 173 (413)
..+.++||.|.++.-+..+.+.+.+. ++.+..++|..... . ........++|+|+|. .
T Consensus 159 ~~~~k~iiF~~~~~~~~~~~~~L~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~~g~~~vLv~T~-----~- 228 (286)
T d1wp9a2 159 KQNSKIIVFTNYRETAKKIVNELVKD----GIKAKRFVGQASKENDRGLSQREQKLILDEFARGEFNVLVATS-----V- 228 (286)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHT----TCCEEEECCSSCC-------CCHHHHHHHHHHHTSCSEEEECG-----G-
T ss_pred CCCCcEEEEeCcHHhHHHHHHHHHHc----CCceEEeeccccccccchhchHHHHHHHHHHHcCCCcEEEEcc-----c-
Confidence 44559999999999998888887764 55666665543221 1 1222345789999992 2
Q ss_pred HcCCCCCCcceEEEeccch
Q 015129 174 RRQSLRPDYIKMFVLDEAD 192 (413)
Q Consensus 174 ~~~~~~~~~~~~iV~DE~h 192 (413)
...++++..+++||.=+.+
T Consensus 229 ~~~Gld~~~~~~Vi~~d~~ 247 (286)
T d1wp9a2 229 GEEGLDVPEVDLVVFYEPV 247 (286)
T ss_dssp GGGGGGSTTCCEEEESSCC
T ss_pred eeccccCCCCCEEEEeCCC
Confidence 3346778888888865554
No 170
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=79.34 E-value=0.5 Score=40.22 Aligned_cols=24 Identities=29% Similarity=0.504 Sum_probs=18.3
Q ss_pred hhhhhcCCc--EEEeCCCCCcchHHh
Q 015129 71 IVPFCKGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 71 ~~~i~~~~~--~li~~~tGsGKT~~~ 94 (413)
++.+++|.+ ++.-|+||||||++.
T Consensus 72 v~~~l~G~n~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 72 VDDILNGYNGTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp HHHHTTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHhhccCceeEEecccCCCCcceee
Confidence 344556766 577899999999885
No 171
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=78.86 E-value=0.52 Score=40.24 Aligned_cols=25 Identities=28% Similarity=0.419 Sum_probs=17.9
Q ss_pred hhhhhcCCc--EEEeCCCCCcchHHhH
Q 015129 71 IVPFCKGLD--VIQQAQSGTGKTATFC 95 (413)
Q Consensus 71 ~~~i~~~~~--~li~~~tGsGKT~~~~ 95 (413)
+..+++|.+ ++.-|+||||||+++.
T Consensus 106 v~~~l~G~n~tifaYGqTGSGKTyTm~ 132 (362)
T d1v8ka_ 106 VQTIFEGGKATCFAYGQTGSGKTHTMG 132 (362)
T ss_dssp HHHHHTTCEEEEEEEESTTSSHHHHHH
T ss_pred HHHHHhccCceEEeeccCCCCCceeee
Confidence 334456766 4566999999999853
No 172
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=78.37 E-value=0.53 Score=36.70 Aligned_cols=17 Identities=24% Similarity=0.329 Sum_probs=13.6
Q ss_pred EEEeCCCCCcchHHhHH
Q 015129 80 VIQQAQSGTGKTATFCS 96 (413)
Q Consensus 80 ~li~~~tGsGKT~~~~~ 96 (413)
+.|.||+||||+.++-.
T Consensus 6 I~I~GppGSGKgT~ak~ 22 (225)
T d1ckea_ 6 ITIDGPSGAGKGTLCKA 22 (225)
T ss_dssp EEEECCTTSSHHHHHHH
T ss_pred EEEECCCCCCHHHHHHH
Confidence 46679999999988743
No 173
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=78.36 E-value=0.52 Score=39.38 Aligned_cols=17 Identities=24% Similarity=0.376 Sum_probs=14.8
Q ss_pred cEEEeCCCCCcchHHhH
Q 015129 79 DVIQQAQSGTGKTATFC 95 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~~ 95 (413)
.+++.||||+|||..+-
T Consensus 54 ~~lf~Gp~GvGKT~lak 70 (315)
T d1r6bx3 54 SFLFAGPTGVGKTEVTV 70 (315)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCcchhHHHHH
Confidence 58999999999998763
No 174
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.13 E-value=0.49 Score=35.72 Aligned_cols=17 Identities=12% Similarity=0.212 Sum_probs=14.6
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
+-++++||+|+|||...
T Consensus 4 k~ivl~Gpsg~GK~tl~ 20 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIK 20 (178)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred CcEEEECCCCCCHHHHH
Confidence 45899999999999764
No 175
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=78.08 E-value=0.8 Score=37.08 Aligned_cols=41 Identities=15% Similarity=0.029 Sum_probs=28.1
Q ss_pred CCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHH
Q 015129 77 GLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l 120 (413)
|+-..+.+|.|+|||..++..+...... +..++|+---..+
T Consensus 57 g~itei~G~~~sGKT~l~l~~~~~aqk~---g~~v~yiDtE~~~ 97 (268)
T d1xp8a1 57 GRITEIYGPESGGKTTLALAIVAQAQKA---GGTCAFIDAEHAL 97 (268)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHHHHT---TCCEEEEESSCCC
T ss_pred ceEEEEecCCccchHHHHHHHHHHHHhC---CCEEEEEECCccC
Confidence 5668999999999998876666554433 3377776554333
No 176
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=77.95 E-value=0.44 Score=36.84 Aligned_cols=16 Identities=19% Similarity=0.152 Sum_probs=13.8
Q ss_pred EEEeCCCCCcchHHhH
Q 015129 80 VIQQAQSGTGKTATFC 95 (413)
Q Consensus 80 ~li~~~tGsGKT~~~~ 95 (413)
++++|.+|||||..+-
T Consensus 5 i~l~GlpgsGKSTla~ 20 (213)
T d1bifa1 5 IVMVGLPARGKTYISK 20 (213)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 6889999999998763
No 177
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=77.79 E-value=0.52 Score=40.28 Aligned_cols=25 Identities=28% Similarity=0.442 Sum_probs=19.2
Q ss_pred hhhhhhcCCc--EEEeCCCCCcchHHh
Q 015129 70 GIVPFCKGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 70 ~~~~i~~~~~--~li~~~tGsGKT~~~ 94 (413)
.++.+++|.+ ++.-|+||||||++.
T Consensus 66 lv~~~l~G~n~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 66 LVQSAVDGYNVCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp HHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred HHHHHhcCCceeeeccccCCCCccccc
Confidence 3555667765 577899999999885
No 178
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=77.74 E-value=0.54 Score=35.34 Aligned_cols=20 Identities=30% Similarity=0.451 Sum_probs=17.3
Q ss_pred cCCcEEEeCCCCCcchHHhH
Q 015129 76 KGLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~~ 95 (413)
.|+.+++.|+.|+|||..++
T Consensus 14 ~g~gvli~G~sG~GKS~lal 33 (177)
T d1knxa2 14 FGVGVLLTGRSGIGKSECAL 33 (177)
T ss_dssp TTEEEEEEESSSSSHHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHHH
Confidence 57889999999999997764
No 179
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=77.37 E-value=1.1 Score=36.60 Aligned_cols=31 Identities=19% Similarity=0.048 Sum_probs=23.2
Q ss_pred hhhhhh---hcCCcEEEeCCCCCcchHHhHHHHH
Q 015129 69 RGIVPF---CKGLDVIQQAQSGTGKTATFCSGIL 99 (413)
Q Consensus 69 ~~~~~i---~~~~~~li~~~tGsGKT~~~~~~~~ 99 (413)
+++..+ .+|+...|.|+.|+|||......+.
T Consensus 32 r~ID~l~PigrGQr~~I~g~~g~GKT~l~~~i~~ 65 (289)
T d1xpua3 32 RVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQ 65 (289)
T ss_dssp HHHHHHSCCBTTCEEEEEECSSSSHHHHHHHHHH
T ss_pred eeeeecccccCCCeeeEeCCCCCCHHHHHHHHHH
Confidence 455554 4699999999999999977544333
No 180
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=77.33 E-value=0.63 Score=39.49 Aligned_cols=24 Identities=25% Similarity=0.479 Sum_probs=18.3
Q ss_pred hhhhhcCCc--EEEeCCCCCcchHHh
Q 015129 71 IVPFCKGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 71 ~~~i~~~~~--~li~~~tGsGKT~~~ 94 (413)
++.+++|.+ ++.-|+||||||.+.
T Consensus 79 v~~~l~G~n~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 79 LQHAFEGYNVCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp HHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHhccCceeeeeccCCCCCceee
Confidence 344556765 688899999999885
No 181
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.18 E-value=0.48 Score=36.83 Aligned_cols=15 Identities=13% Similarity=0.266 Sum_probs=12.6
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+-|.|++|||||..+
T Consensus 5 IgI~G~~gSGKSTla 19 (213)
T d1uj2a_ 5 IGVSGGTASGKSSVC 19 (213)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 457899999999765
No 182
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=77.07 E-value=0.46 Score=39.64 Aligned_cols=16 Identities=31% Similarity=0.389 Sum_probs=13.0
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
++++.||+|+|||+.+
T Consensus 125 ~~l~~G~pG~GKT~la 140 (321)
T d1w44a_ 125 MVIVTGKGNSGKTPLV 140 (321)
T ss_dssp EEEEECSSSSCHHHHH
T ss_pred eEEEECCCCccHHHHH
Confidence 3455899999999875
No 183
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=76.56 E-value=0.62 Score=39.43 Aligned_cols=25 Identities=32% Similarity=0.420 Sum_probs=19.1
Q ss_pred hhhhhhcCCc--EEEeCCCCCcchHHh
Q 015129 70 GIVPFCKGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 70 ~~~~i~~~~~--~li~~~tGsGKT~~~ 94 (413)
.++.+++|.+ ++.-|+||||||++.
T Consensus 72 lv~~~l~G~n~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 72 ILDEVIMGYNCTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp HHHHHHTTCEEEEEEEECTTSSHHHHH
T ss_pred hHHHHhccCCceEEeeeeccccceEEe
Confidence 3455566765 578999999999885
No 184
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.54 E-value=4.5 Score=30.84 Aligned_cols=74 Identities=18% Similarity=0.182 Sum_probs=51.6
Q ss_pred cccceEEEEccHHHHHHHHHHhhhC-----CCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcC------CCCCCCCCC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRSR-----DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD------LLARGIDVQ 346 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~~-----~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~------~~~~G~d~~ 346 (413)
....++|.+++++.+..+.+.+... +..+....|+.....+...+ ....+++|+|+ .-...+++.
T Consensus 70 ~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l----~~~~~ivv~TPgrl~~~~~~~~~~~~ 145 (206)
T d1veca_ 70 DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRL----DDTVHVVIATPGRILDLIKKGVAKVD 145 (206)
T ss_dssp CSCCEEEECSCHHHHHHHHHHHHHHTTTSSSCCEEEECSSSCHHHHHHHT----TSCCSEEEECHHHHHHHHHTTCSCCT
T ss_pred cCcceEEEeecchhhHHHHHHHHHHhhcccCcccccccCCccHHHHHHHH----HhccCeEEeCCccccccccchhcccc
Confidence 3457999999999999888777542 35566677776655443332 35778999997 234456777
Q ss_pred CCcEEEEcc
Q 015129 347 QVSLVINYD 355 (413)
Q Consensus 347 ~~~~vi~~~ 355 (413)
++.++|...
T Consensus 146 ~l~~lVlDE 154 (206)
T d1veca_ 146 HVQMIVLDE 154 (206)
T ss_dssp TCCEEEEET
T ss_pred ccceEEEec
Confidence 899988654
No 185
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=76.53 E-value=0.53 Score=37.88 Aligned_cols=21 Identities=33% Similarity=0.355 Sum_probs=17.6
Q ss_pred hhcCCcEEEeCCCCCcchHHh
Q 015129 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~ 94 (413)
+..|..+.++|++|||||...
T Consensus 41 i~~Ge~vaivG~sGsGKSTLl 61 (255)
T d2hyda1 41 IEKGETVAFVGMSGGGKSTLI 61 (255)
T ss_dssp ECTTCEEEEECSTTSSHHHHH
T ss_pred EcCCCEEEEECCCCCcHHHHH
Confidence 346889999999999999654
No 186
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=76.51 E-value=0.69 Score=34.69 Aligned_cols=20 Identities=40% Similarity=0.552 Sum_probs=17.2
Q ss_pred cCCcEEEeCCCCCcchHHhH
Q 015129 76 KGLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~~ 95 (413)
.|+.+++.|+.|+|||..++
T Consensus 13 ~g~gvl~~G~sG~GKStlal 32 (176)
T d1kkma_ 13 YGLGVLITGDSGVGKSETAL 32 (176)
T ss_dssp TTEEEEEECCTTSCHHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHHH
Confidence 47889999999999997754
No 187
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=76.39 E-value=0.73 Score=35.93 Aligned_cols=17 Identities=12% Similarity=0.190 Sum_probs=13.6
Q ss_pred EEEeCCCCCcchHHhHH
Q 015129 80 VIQQAQSGTGKTATFCS 96 (413)
Q Consensus 80 ~li~~~tGsGKT~~~~~ 96 (413)
+.|.||+|||||.++-.
T Consensus 6 IaIdGp~GsGKgT~ak~ 22 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKI 22 (223)
T ss_dssp EEEECSSCSSHHHHHHH
T ss_pred EEEECCCCCCHHHHHHH
Confidence 45679999999988743
No 188
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=76.31 E-value=0.64 Score=39.75 Aligned_cols=25 Identities=32% Similarity=0.444 Sum_probs=18.9
Q ss_pred hhhhhhcCCc--EEEeCCCCCcchHHh
Q 015129 70 GIVPFCKGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 70 ~~~~i~~~~~--~li~~~tGsGKT~~~ 94 (413)
.++.+++|.+ ++.-|+||||||++.
T Consensus 116 lv~~vl~G~n~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 116 LIQSALDGYNICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp HHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred HHHHHhcccceeEEeeccCCCccceEe
Confidence 3444566765 688999999999885
No 189
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=76.25 E-value=0.2 Score=38.91 Aligned_cols=81 Identities=15% Similarity=0.201 Sum_probs=49.5
Q ss_pred ceeEEEEcCcHHHHHH-----HHHHHHHhhcc--cCcEEEEEEcCcchHHHH----HHHHcCCcEEEEccHHHHHHHHcC
Q 015129 108 QCQALVLAPTRELAQQ-----IEKVMRALGDY--LGVKVHACVGGTSVREDQ----RILQAGVHVVVGTPGRVFDMLRRQ 176 (413)
Q Consensus 108 ~~~~liv~P~~~l~~q-----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~iii~T~~~l~~~~~~~ 176 (413)
+.++.||||..+-... ..+.+..+... .+.++..+||..+..+.. ...+...+|+||| -+-+-
T Consensus 29 g~QvyvVcP~Ieese~~~~~~~~e~~~~l~~~~~p~~~v~~lHG~m~~~eke~~m~~F~~g~~~iLVaT------tViE~ 102 (206)
T d1gm5a4 29 GGQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKLGLMHGRLSQEEKDRVMLEFAEGRYDILVST------TVIEV 102 (206)
T ss_dssp SCCBCCBCCCC--------CHHHHHHHSGGGSCC---CBCCCCSSSCCSCSHHHHHHHTTTSSSBCCCS------SCCCS
T ss_pred CCCEEEEEeeecccccccchhhHHHHHHHHHhcCCCCeEEEEeecccHHHHHHHHHHHHCCCEEEEEEe------hhhhc
Confidence 3489999998643222 12222333222 256777888887654433 3344678999999 33445
Q ss_pred CCCCCcceEEEeccchHH
Q 015129 177 SLRPDYIKMFVLDEADEM 194 (413)
Q Consensus 177 ~~~~~~~~~iV~DE~h~~ 194 (413)
+.+.++..++|+..++.+
T Consensus 103 GIDip~a~~iii~~a~~f 120 (206)
T d1gm5a4 103 GIDVPRANVMVIENPERF 120 (206)
T ss_dssp CSCCTTCCEEEBCSCSSS
T ss_pred cccccCCcEEEEEccCCc
Confidence 788899999999999874
No 190
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=75.97 E-value=0.57 Score=36.13 Aligned_cols=20 Identities=35% Similarity=0.350 Sum_probs=17.1
Q ss_pred hcCCcEEEeCCCCCcchHHh
Q 015129 75 CKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 75 ~~~~~~li~~~tGsGKT~~~ 94 (413)
.+|.-+.+.||.|+|||..+
T Consensus 25 ~~Gei~~l~G~NGsGKSTLl 44 (200)
T d1sgwa_ 25 EKGNVVNFHGPNGIGKTTLL 44 (200)
T ss_dssp ETTCCEEEECCTTSSHHHHH
T ss_pred cCCCEEEEECCCCChHHHHH
Confidence 45888999999999999754
No 191
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=75.84 E-value=14 Score=28.70 Aligned_cols=72 Identities=11% Similarity=0.082 Sum_probs=52.0
Q ss_pred cceEEEEccHHHHHHHHHHhhh----CCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcCC------CCCCCCCCCCc
Q 015129 280 TQSVIFVNTRRKVDWLTDKMRS----RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL------LARGIDVQQVS 349 (413)
Q Consensus 280 ~~~lif~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~------~~~G~d~~~~~ 349 (413)
.+++|.+++++.+..+.+.+.. .+..+..+.|+.....+.+ ......+|+|+|+- -...+++.++.
T Consensus 99 ~~alil~pt~el~~q~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~ivV~TP~~l~~~~~~~~~~l~~v~ 174 (238)
T d1wrba1 99 PKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIR----EVQMGCHLLVATPGRLVDFIEKNKISLEFCK 174 (238)
T ss_dssp CSEEEECSSHHHHHHHHHHHHHHHTTSSCCEEEECSSSCSHHHHH----HHSSCCSEEEECHHHHHHHHHTTSBCCTTCC
T ss_pred ceEEEeccchhhhcchheeeeecccCCCcEEEEEeccchhhHHHh----hcccCCceeecCHHHHHhHHccCceeccccc
Confidence 4799999999999988877654 3567777877765544322 23457889999982 24567788999
Q ss_pred EEEEcc
Q 015129 350 LVINYD 355 (413)
Q Consensus 350 ~vi~~~ 355 (413)
++|..+
T Consensus 175 ~lViDE 180 (238)
T d1wrba1 175 YIVLDE 180 (238)
T ss_dssp EEEEET
T ss_pred eeeeeh
Confidence 988654
No 192
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=75.17 E-value=0.71 Score=34.38 Aligned_cols=20 Identities=35% Similarity=0.506 Sum_probs=17.1
Q ss_pred cCCcEEEeCCCCCcchHHhH
Q 015129 76 KGLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~~ 95 (413)
.|+.+++.|+.|+|||..++
T Consensus 14 ~g~gvli~G~sg~GKS~la~ 33 (169)
T d1ko7a2 14 YGVGVLITGDSGIGKSETAL 33 (169)
T ss_dssp TTEEEEEEESTTSSHHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHHH
Confidence 57889999999999997653
No 193
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=75.15 E-value=1.6 Score=33.72 Aligned_cols=74 Identities=14% Similarity=0.132 Sum_probs=46.3
Q ss_pred cccceEEEEccHHHHHHHHHHhhhC----CCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcC------CCCCCCCCCC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRSR----DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD------LLARGIDVQQ 347 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~------~~~~G~d~~~ 347 (413)
.+..++|++++++.+......+... ........++.+..++... ..+.+|+|+|+ .-..++++.+
T Consensus 77 ~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~IvI~TP~~l~~~~~~~~~~l~~ 151 (212)
T d1qdea_ 77 KAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEG-----LRDAQIVVGTPGRVFDNIQRRRFRTDK 151 (212)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHTTTSCCCEEEECC---------------CTTCSEEEECHHHHHHHHHTTSSCCTT
T ss_pred CCcceEEEcccHHHhhhhhhhhcccccccccceeeEeeccchhHHHHH-----hcCCcEEEECCCccccccccCceecCc
Confidence 3458999999999998888777543 3445555555443333222 23578999996 2456778899
Q ss_pred CcEEEEccC
Q 015129 348 VSLVINYDL 356 (413)
Q Consensus 348 ~~~vi~~~~ 356 (413)
++++|..+.
T Consensus 152 l~~lVlDEa 160 (212)
T d1qdea_ 152 IKMFILDEA 160 (212)
T ss_dssp CCEEEEETH
T ss_pred ceEEeehhh
Confidence 999986543
No 194
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=75.06 E-value=1.2 Score=35.03 Aligned_cols=20 Identities=30% Similarity=0.365 Sum_probs=16.8
Q ss_pred hhcCCcEEEeCCCCCcchHH
Q 015129 74 FCKGLDVIQQAQSGTGKTAT 93 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~ 93 (413)
+.+|.-+.+.||.|+|||..
T Consensus 23 i~~Gei~~liGpsGsGKSTL 42 (232)
T d2awna2 23 IHEGEFVVFVGPSGCGKSTL 42 (232)
T ss_dssp ECTTCEEEEECCTTSSHHHH
T ss_pred EcCCCEEEEECCCCChHHHH
Confidence 34588899999999999965
No 195
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=74.73 E-value=1.3 Score=32.51 Aligned_cols=15 Identities=20% Similarity=0.107 Sum_probs=12.4
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+-|+|+.|||||...
T Consensus 4 i~I~G~~gSGKTTli 18 (165)
T d1xjca_ 4 WQVVGYKHSGKTTLM 18 (165)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEEeCCCCCHHHHH
Confidence 358999999999764
No 196
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=74.70 E-value=0.89 Score=38.38 Aligned_cols=26 Identities=27% Similarity=0.388 Sum_probs=19.9
Q ss_pred hhhhhhcCCc--EEEeCCCCCcchHHhH
Q 015129 70 GIVPFCKGLD--VIQQAQSGTGKTATFC 95 (413)
Q Consensus 70 ~~~~i~~~~~--~li~~~tGsGKT~~~~ 95 (413)
.++.+++|.+ ++.-|+||||||++..
T Consensus 74 ~v~~~l~G~n~~i~aYGqtgSGKT~T~~ 101 (342)
T d1f9va_ 74 LVQSSLDGYNVCIFAYGQTGSGKTFTML 101 (342)
T ss_dssp HHGGGGGTCCEEEEEECCTTSSHHHHHH
T ss_pred hhcchhcccccceeeeeccCCccccccc
Confidence 4555667765 5779999999999863
No 197
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=74.47 E-value=0.91 Score=37.04 Aligned_cols=14 Identities=29% Similarity=0.380 Sum_probs=11.5
Q ss_pred EEeCCCCCcchHHh
Q 015129 81 IQQAQSGTGKTATF 94 (413)
Q Consensus 81 li~~~tGsGKT~~~ 94 (413)
-|.|++|||||..+
T Consensus 31 Gi~G~qGSGKSTl~ 44 (286)
T d1odfa_ 31 FFSGPQGSGKSFTS 44 (286)
T ss_dssp EEECCTTSSHHHHH
T ss_pred EeECCCCCCHHHHH
Confidence 36899999999654
No 198
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=74.35 E-value=15 Score=29.12 Aligned_cols=18 Identities=17% Similarity=0.366 Sum_probs=14.7
Q ss_pred CcEEEeCCCCCcchHHhH
Q 015129 78 LDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~ 95 (413)
.-+.|.|.-|.|||..+.
T Consensus 45 ~~v~I~GmgGiGKTtLA~ 62 (277)
T d2a5yb3 45 FFLFLHGRAGSGKSVIAS 62 (277)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 346799999999997754
No 199
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=74.13 E-value=7.5 Score=29.43 Aligned_cols=75 Identities=19% Similarity=0.175 Sum_probs=53.6
Q ss_pred cccceEEEEccHHHHHHHHHHhhh----CCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcCC------CCCCCCCCC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRS----RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL------LARGIDVQQ 347 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~------~~~G~d~~~ 347 (413)
.....++.++....+......+.. .+..+...+|+.........+ ....+|||+|+. -...+++.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l----~~~~~Ili~TP~~l~~~l~~~~~~l~~ 143 (206)
T d1s2ma1 68 NKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRL----NETVHILVGTPGRVLDLASRKVADLSD 143 (206)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECSSSCHHHHHHHT----TSCCSEEEECHHHHHHHHHTTCSCCTT
T ss_pred ccccceeeccchhhhhhhhhhhhhcccccCeeEEeecCccchhhHHHHh----cccceEEEECCcccccccccceeeccc
Confidence 445788999998887766665543 467888888988776554433 456889999972 345678889
Q ss_pred CcEEEEccC
Q 015129 348 VSLVINYDL 356 (413)
Q Consensus 348 ~~~vi~~~~ 356 (413)
+.++|..+.
T Consensus 144 l~~lV~DEa 152 (206)
T d1s2ma1 144 CSLFIMDEA 152 (206)
T ss_dssp CCEEEEESH
T ss_pred ceEEEeech
Confidence 999886543
No 200
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=73.50 E-value=8.9 Score=28.58 Aligned_cols=95 Identities=17% Similarity=0.143 Sum_probs=60.7
Q ss_pred EEEeccccchHHHHHHHH---HhhcccceEEEEccHHHHHHHHHHhhhC----CCeeEEecCCCCHHHHHHHHHHHhcCC
Q 015129 257 YVNVEKEEWKLETLCDLY---ETLAITQSVIFVNTRRKVDWLTDKMRSR----DHTVSATHGDMDQNTRDIIMREFRSGS 329 (413)
Q Consensus 257 ~~~~~~~~~~~~~l~~~~---~~~~~~~~lif~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~r~~~~~~f~~~~ 329 (413)
....++..+|.-....+. ....++++++.+|++.-++..++.+.+. +..+..++++.....+......
T Consensus 27 lv~~pTGsGKT~i~~~~~~~~~~~~~~~il~i~P~~~L~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----- 101 (200)
T d1wp9a1 27 LIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVALTGEKSPEERSKAWAR----- 101 (200)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHHSCSCEEEECSSHHHHHHHHHHHHHHBCSCGGGEEEECSCSCHHHHHHHHHH-----
T ss_pred EEEeCCCCcHHHHHHHHHHHHHHhcCCcEEEEcCchHHHHHHHHHHHHhhcccccceeeeecccchhHHHHhhhc-----
Confidence 344566666653222111 1234578999999998887777666653 5678888998888888766653
Q ss_pred CcEEEEcCC------CCCCCCCCCCcEEEEccC
Q 015129 330 SRVLITTDL------LARGIDVQQVSLVINYDL 356 (413)
Q Consensus 330 ~~vli~t~~------~~~G~d~~~~~~vi~~~~ 356 (413)
..++++|+. ....+...+++.||....
T Consensus 102 ~~i~i~t~~~~~~~~~~~~~~~~~~~~vIiDE~ 134 (200)
T d1wp9a1 102 AKVIVATPQTIENDLLAGRISLEDVSLIVFDEA 134 (200)
T ss_dssp CSEEEECHHHHHHHHHTTSCCTTSCSEEEEETG
T ss_pred ccccccccchhHHHHhhhhhhccccceEEEEeh
Confidence 468888752 233445567888886554
No 201
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=73.48 E-value=0.79 Score=38.16 Aligned_cols=17 Identities=24% Similarity=0.266 Sum_probs=14.5
Q ss_pred cEEEeCCCCCcchHHhH
Q 015129 79 DVIQQAQSGTGKTATFC 95 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~~ 95 (413)
.++++||||+|||..+-
T Consensus 55 ~~lf~Gp~G~GKt~lak 71 (315)
T d1qvra3 55 SFLFLGPTGVGKTELAK 71 (315)
T ss_dssp EEEEBSCSSSSHHHHHH
T ss_pred EEEEECCCcchHHHHHH
Confidence 46889999999998763
No 202
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=73.38 E-value=0.66 Score=37.24 Aligned_cols=21 Identities=29% Similarity=0.363 Sum_probs=17.6
Q ss_pred hhcCCcEEEeCCCCCcchHHh
Q 015129 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~ 94 (413)
+..|..+.|++|+|||||..+
T Consensus 38 i~~Ge~iaivG~sGsGKSTLl 58 (253)
T d3b60a1 38 IPAGKTVALVGRSGSGKSTIA 58 (253)
T ss_dssp ECTTCEEEEEECTTSSHHHHH
T ss_pred EcCCCEEEEECCCCChHHHHH
Confidence 345889999999999999654
No 203
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=72.33 E-value=6.2 Score=29.90 Aligned_cols=74 Identities=18% Similarity=0.149 Sum_probs=46.8
Q ss_pred eEEEEcCcHHHHHHHHHHHHHhhcccC--------------------------cEEEEEEcCcchHHHHHH----HHcCC
Q 015129 110 QALVLAPTRELAQQIEKVMRALGDYLG--------------------------VKVHACVGGTSVREDQRI----LQAGV 159 (413)
Q Consensus 110 ~~liv~P~~~l~~q~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~----~~~~~ 159 (413)
++||.||++.-+...+..+........ .-+...+++......... .....
T Consensus 42 ~~LVF~~sRk~~~~~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~GIa~hh~~l~~~~r~~ie~~f~~g~i 121 (201)
T d2p6ra4 42 GVLVFESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLNGQRRVVEDAFRRGNI 121 (201)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHHHTTCCCSSHHHHHHTTCCSHHHHHHHHHHHTTCCEECTTSCHHHHHHHHHHHHTTSC
T ss_pred cEEEEeCCHHHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhhhhhHHHHHHHhccHHHHHHHhhhhhHHHHHHHHhCCCc
Confidence 899999999887777777665432110 115667777765544322 23567
Q ss_pred cEEEEccHHHHHHHHcCCCCCCcceEEEec
Q 015129 160 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLD 189 (413)
Q Consensus 160 ~iii~T~~~l~~~~~~~~~~~~~~~~iV~D 189 (413)
+++|||.. ...+.++....+||.|
T Consensus 122 ~vlvaT~~------l~~Gin~p~~~vvi~~ 145 (201)
T d2p6ra4 122 KVVVATPT------LAAGVNLPARRVIVRS 145 (201)
T ss_dssp CEEEECST------TTSSSCCCBSEEEECC
T ss_pred eEEEechH------HHhhcCCCCceEEEec
Confidence 89999943 2356777766666653
No 204
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=72.16 E-value=1.2 Score=34.82 Aligned_cols=32 Identities=22% Similarity=0.239 Sum_probs=20.7
Q ss_pred EEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcC
Q 015129 80 VIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAP 116 (413)
Q Consensus 80 ~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P 116 (413)
.++.|.-|||||.. +-.++.. ..+.++.|++.
T Consensus 6 ~iitGFLGaGKTTl-l~~lL~~----~~~~riaVI~N 37 (222)
T d1nija1 6 TLLTGFLGAGKTTL-LRHILNE----QHGYKIAVIEN 37 (222)
T ss_dssp EEEEESSSSSCHHH-HHHHHHS----CCCCCEEEECS
T ss_pred EEEeeCCCCCHHHH-HHHHHhc----CCCCcEEEEEe
Confidence 48899999999964 3333332 33446767665
No 205
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=71.99 E-value=1 Score=34.25 Aligned_cols=16 Identities=31% Similarity=0.553 Sum_probs=13.6
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
-+.+.|+.|||||..+
T Consensus 11 ~I~ieG~~GsGKTTl~ 26 (197)
T d2vp4a1 11 TVLIEGNIGSGKTTYL 26 (197)
T ss_dssp EEEEECSTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3789999999999764
No 206
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=71.79 E-value=0.91 Score=37.02 Aligned_cols=20 Identities=30% Similarity=0.409 Sum_probs=16.8
Q ss_pred hcCCcEEEeCCCCCcchHHh
Q 015129 75 CKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 75 ~~~~~~li~~~tGsGKT~~~ 94 (413)
.+|..+.+.||.|+|||...
T Consensus 60 ~~Ge~vaivG~nGsGKSTLl 79 (281)
T d1r0wa_ 60 EKGEMLAITGSTGSGKTSLL 79 (281)
T ss_dssp CTTCEEEEEESTTSSHHHHH
T ss_pred cCCCEEEEECCCCChHHHHH
Confidence 35888999999999999653
No 207
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=71.19 E-value=1.7 Score=34.31 Aligned_cols=21 Identities=33% Similarity=0.409 Sum_probs=17.4
Q ss_pred hhcCCcEEEeCCCCCcchHHh
Q 015129 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~ 94 (413)
+.+|.-+.+.||.|+|||...
T Consensus 29 v~~Ge~~~liGpsGaGKSTLl 49 (239)
T d1v43a3 29 IKDGEFLVLLGPSGCGKTTTL 49 (239)
T ss_dssp ECTTCEEEEECCTTSSHHHHH
T ss_pred ECCCCEEEEECCCCChHHHHH
Confidence 345888999999999999754
No 208
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=71.17 E-value=5.1 Score=32.12 Aligned_cols=26 Identities=27% Similarity=0.272 Sum_probs=20.3
Q ss_pred hhcCCcEEEeCCCCCcchHHhHHHHH
Q 015129 74 FCKGLDVIQQAQSGTGKTATFCSGIL 99 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~~~~~~ 99 (413)
+.+|+...+.++.|+|||..+.-.+.
T Consensus 65 igkGQr~~If~~~g~GKt~l~~~i~~ 90 (276)
T d2jdid3 65 YAKGGKIGLFGGAGVGKTVLIMELIN 90 (276)
T ss_dssp EETTCEEEEEECTTSSHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCCCCHHHHHHHHHH
Confidence 34699999999999999977554443
No 209
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=70.48 E-value=0.89 Score=36.03 Aligned_cols=20 Identities=40% Similarity=0.425 Sum_probs=16.9
Q ss_pred hcCCcEEEeCCCCCcchHHh
Q 015129 75 CKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 75 ~~~~~~li~~~tGsGKT~~~ 94 (413)
.+|.-+-+.||.|+|||..+
T Consensus 27 ~~Ge~~~liG~sGaGKSTll 46 (240)
T d1g2912 27 KDGEFMILLGPSGCGKTTTL 46 (240)
T ss_dssp ETTCEEEEECSTTSSHHHHH
T ss_pred cCCCEEEEECCCCChHHHHH
Confidence 45888999999999999653
No 210
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=70.06 E-value=0.84 Score=36.18 Aligned_cols=20 Identities=25% Similarity=0.154 Sum_probs=17.0
Q ss_pred hhcCCcEEEeCCCCCcchHH
Q 015129 74 FCKGLDVIQQAQSGTGKTAT 93 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~ 93 (413)
+.+|.-+.+.||.|+|||..
T Consensus 28 i~~Ge~~~iiG~sGsGKSTL 47 (240)
T d3dhwc1 28 VPAGQIYGVIGASGAGKSTL 47 (240)
T ss_dssp ECSSCEEEEEESTTSSHHHH
T ss_pred EcCCCEEEEECCCCCCHHHH
Confidence 34688899999999999965
No 211
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=69.93 E-value=1.8 Score=35.69 Aligned_cols=15 Identities=20% Similarity=0.257 Sum_probs=13.0
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+-|.|+.|||||..+
T Consensus 83 IGIaG~sgSGKSTla 97 (308)
T d1sq5a_ 83 ISIAGSVAVGKSTTA 97 (308)
T ss_dssp EEEEECTTSSHHHHH
T ss_pred EEEeCCCCCCCcHHH
Confidence 568999999999765
No 212
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=69.76 E-value=3.1 Score=31.81 Aligned_cols=20 Identities=20% Similarity=0.318 Sum_probs=16.3
Q ss_pred cCCcEEEeCCCCCcchHHhH
Q 015129 76 KGLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~~ 95 (413)
+|+-+++.|+.|||||...-
T Consensus 1 rgkfIviEG~dGsGKsT~~~ 20 (210)
T d4tmka_ 1 RSKYIVIEGLEGAGKTTARN 20 (210)
T ss_dssp CCCEEEEEECTTSCHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 36668889999999998753
No 213
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=69.43 E-value=1.3 Score=35.58 Aligned_cols=18 Identities=17% Similarity=0.134 Sum_probs=15.5
Q ss_pred CCcEEEeCCCCCcchHHh
Q 015129 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~ 94 (413)
++.+++.||.|+|||...
T Consensus 29 ~~~i~i~G~~G~GKTsLl 46 (283)
T d2fnaa2 29 APITLVLGLRRTGKSSII 46 (283)
T ss_dssp SSEEEEEESTTSSHHHHH
T ss_pred CCEEEEEcCCCCcHHHHH
Confidence 567899999999999764
No 214
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=69.25 E-value=1.4 Score=34.62 Aligned_cols=21 Identities=24% Similarity=0.284 Sum_probs=17.3
Q ss_pred hhcCCcEEEeCCCCCcchHHh
Q 015129 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~ 94 (413)
+.+|.-+.+.||.|+|||...
T Consensus 23 i~~Ge~~~liGpsGaGKSTll 43 (229)
T d3d31a2 23 VESGEYFVILGPTGAGKTLFL 43 (229)
T ss_dssp ECTTCEEEEECCCTHHHHHHH
T ss_pred ECCCCEEEEECCCCCcHHHHH
Confidence 345888999999999999653
No 215
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=68.65 E-value=1.1 Score=35.40 Aligned_cols=20 Identities=30% Similarity=0.258 Sum_probs=17.2
Q ss_pred hcCCcEEEeCCCCCcchHHh
Q 015129 75 CKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 75 ~~~~~~li~~~tGsGKT~~~ 94 (413)
.+|..+.+.||.|+|||...
T Consensus 29 ~~Ge~~~iiG~sGsGKSTll 48 (242)
T d1oxxk2 29 ENGERFGILGPSGAGKTTFM 48 (242)
T ss_dssp CTTCEEEEECSCHHHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHH
Confidence 45888999999999999754
No 216
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}
Probab=68.64 E-value=6.1 Score=29.33 Aligned_cols=83 Identities=12% Similarity=0.069 Sum_probs=41.3
Q ss_pred cCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcH-HHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHH
Q 015129 76 KGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTR-ELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 154 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~-~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (413)
++++++|.+.=|+||+.++.+ ... +.+-++++.+. +-.......++++....+..+....- ...... ..
T Consensus 17 ~~k~vlIlGaGGaarai~~al------~~~--g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~-~~ 86 (182)
T d1vi2a1 17 KGKTMVLLGAGGASTAIGAQG------AIE--GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL-ADQQAF-AE 86 (182)
T ss_dssp TTCEEEEECCSHHHHHHHHHH------HHT--TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEET-TCHHHH-HH
T ss_pred CCCEEEEECCcHHHHHHHHHH------hhc--CCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeec-ccccch-hh
Confidence 678999999989988865421 111 12445555543 22333333344443333444433322 222222 22
Q ss_pred HHcCCcEEE-EccHH
Q 015129 155 LQAGVHVVV-GTPGR 168 (413)
Q Consensus 155 ~~~~~~iii-~T~~~ 168 (413)
....++++| |||-.
T Consensus 87 ~~~~~diiIN~Tp~G 101 (182)
T d1vi2a1 87 ALASADILTNGTKVG 101 (182)
T ss_dssp HHHTCSEEEECSSTT
T ss_pred hhcccceeccccCCc
Confidence 234578888 66633
No 217
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.28 E-value=2.2 Score=32.80 Aligned_cols=20 Identities=15% Similarity=0.275 Sum_probs=15.5
Q ss_pred cCCcEEEeCCCCCcchHHhH
Q 015129 76 KGLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~~ 95 (413)
+|.=+.+.|+.|+|||..+-
T Consensus 2 rG~lI~ieG~dGsGKsT~~~ 21 (209)
T d1nn5a_ 2 RGALIVLEGVDRAGKSTQSR 21 (209)
T ss_dssp CCCEEEEEESTTSSHHHHHH
T ss_pred CeeEEEEECCCCCCHHHHHH
Confidence 35556778999999998753
No 218
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=68.14 E-value=1.1 Score=34.74 Aligned_cols=18 Identities=28% Similarity=0.403 Sum_probs=15.4
Q ss_pred CCcEEEeCCCCCcchHHh
Q 015129 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~ 94 (413)
|.-+.+.|.+|||||..+
T Consensus 24 g~vIwltGlsGsGKTTia 41 (208)
T d1m7ga_ 24 GLTIWLTGLSASGKSTLA 41 (208)
T ss_dssp CEEEEEECSTTSSHHHHH
T ss_pred CeEEEEECCCCCCHHHHH
Confidence 556899999999999775
No 219
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=67.41 E-value=21 Score=26.51 Aligned_cols=81 Identities=12% Similarity=0.041 Sum_probs=63.4
Q ss_pred EEEEeccccchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEE
Q 015129 256 FYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 335 (413)
Q Consensus 256 ~~~~~~~~~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~ 335 (413)
.....++..+|.....-.. ....+++++.++++.-+....+.|+..+.......+................+...++++
T Consensus 43 vlv~apTGsGKT~~~~~~~-~~~~~~~~~v~P~~~L~~q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 121 (206)
T d1oywa2 43 CLVVMPTGGGKSLCYQIPA-LLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYI 121 (206)
T ss_dssp EEEECSCHHHHHHHHHHHH-HHSSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHHTCCSEEEE
T ss_pred EEEEcCCCCCCcchhhhhh-hhccCceEEeccchhhhhhHHHHHHhhcccccccccccccccchhHHHHHhcCCceEEEE
Confidence 4555666666654433222 234578999999999999999999999888888888888888888888888899999998
Q ss_pred cC
Q 015129 336 TD 337 (413)
Q Consensus 336 t~ 337 (413)
|.
T Consensus 122 t~ 123 (206)
T d1oywa2 122 AP 123 (206)
T ss_dssp CH
T ss_pred ec
Confidence 86
No 220
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=66.82 E-value=1.8 Score=31.66 Aligned_cols=39 Identities=31% Similarity=0.406 Sum_probs=24.9
Q ss_pred CcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHH
Q 015129 78 LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQ 122 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~ 122 (413)
.-+++.|+-|+|||.. .-.++..+... --|-.||=.|++
T Consensus 34 ~ii~L~G~LGaGKTtf-vr~~~~~lg~~-----~~V~SPTF~l~~ 72 (158)
T d1htwa_ 34 IMVYLNGDLGAGKTTL-TRGMLQGIGHQ-----GNVKSPTYTLVE 72 (158)
T ss_dssp EEEEEECSTTSSHHHH-HHHHHHHTTCC-----SCCCCCTTTCEE
T ss_pred eEEEEecCCCccHHHH-HHHHHhhcccc-----cccCCCceEEEE
Confidence 3477899999999955 34455544221 135688876653
No 221
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=66.63 E-value=1.1 Score=33.98 Aligned_cols=14 Identities=21% Similarity=0.256 Sum_probs=12.0
Q ss_pred EEeCCCCCcchHHh
Q 015129 81 IQQAQSGTGKTATF 94 (413)
Q Consensus 81 li~~~tGsGKT~~~ 94 (413)
-|.|+.|||||.++
T Consensus 7 gitG~~gSGKstva 20 (191)
T d1uf9a_ 7 GITGNIGSGKSTVA 20 (191)
T ss_dssp EEEECTTSCHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 46799999999875
No 222
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=66.08 E-value=1.2 Score=35.24 Aligned_cols=21 Identities=33% Similarity=0.414 Sum_probs=17.5
Q ss_pred hhcCCcEEEeCCCCCcchHHh
Q 015129 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~ 94 (413)
+.+|.-+-+.||.|+|||..+
T Consensus 29 i~~Gei~~liGpnGaGKSTl~ 49 (240)
T d1ji0a_ 29 VPRGQIVTLIGANGAGKTTTL 49 (240)
T ss_dssp EETTCEEEEECSTTSSHHHHH
T ss_pred ECCCCEEEEECCCCCcHHHHH
Confidence 345888999999999999764
No 223
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=65.98 E-value=2.3 Score=39.56 Aligned_cols=58 Identities=12% Similarity=0.203 Sum_probs=33.7
Q ss_pred ccCcccCCC-CHHHHHHHHHCCCC--CCcHHH--Hhhhhhhhc---CCcEEEeCCCCCcchHHhHH
Q 015129 39 YDSFDAMGL-QENLLRGIYAYGFE--KPSAIQ--QRGIVPFCK---GLDVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 39 ~~~~~~~~l-~~~~~~~l~~~~~~--~~~~~Q--~~~~~~i~~---~~~~li~~~tGsGKT~~~~~ 96 (413)
..||..+++ ++...+........ .|..+. ..|+..+.. ++.+++.|..|||||.+.=.
T Consensus 79 vNP~k~l~iy~~~~~~~y~~~~~~~~~PHifaiA~~Ay~~m~~~~~nQsIiisGeSGaGKTe~~k~ 144 (712)
T d1d0xa2 79 VNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKK 144 (712)
T ss_dssp ECCSSCCSCCSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHH
T ss_pred ECCCCCCCCCCHHHHHHHcCCCcCCCCCcHHHHHHHHHHHHHHhCCCceEEEeCCCCCCHHHHHHH
Confidence 456666664 33334333322222 233333 355555553 67899999999999987633
No 224
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=65.94 E-value=1.2 Score=34.26 Aligned_cols=15 Identities=27% Similarity=0.366 Sum_probs=12.8
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+-|.|+.|||||.++
T Consensus 6 IgitG~igSGKStv~ 20 (208)
T d1vhta_ 6 VALTGGIGSGKSTVA 20 (208)
T ss_dssp EEEECCTTSCHHHHH
T ss_pred EEEECCCcCCHHHHH
Confidence 357999999999876
No 225
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=65.68 E-value=2.6 Score=39.11 Aligned_cols=29 Identities=24% Similarity=0.229 Sum_probs=21.9
Q ss_pred Hhhhhhhhc---CCcEEEeCCCCCcchHHhHH
Q 015129 68 QRGIVPFCK---GLDVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 68 ~~~~~~i~~---~~~~li~~~tGsGKT~~~~~ 96 (413)
..|+..+.+ ++.+++.|..|||||.++=.
T Consensus 74 ~~Ay~~l~~~~~~QsIiisGeSGsGKTe~~k~ 105 (684)
T d1lkxa_ 74 NDAYRSMRQSQENQCVIISGESGAGKTEASKK 105 (684)
T ss_dssp HHHHHHHHHHCCCEEEEEECSTTSSHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEEEcCCCCCHHHHHHH
Confidence 356666553 57899999999999988643
No 226
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.40 E-value=1.3 Score=34.90 Aligned_cols=18 Identities=11% Similarity=0.100 Sum_probs=15.3
Q ss_pred CCcEEEeCCCCCcchHHh
Q 015129 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~ 94 (413)
.+-+.+.|+.|||||..+
T Consensus 2 ~k~I~ieG~dGsGKST~~ 19 (241)
T d1p5zb_ 2 IKKISIEGNIAAGKSTFV 19 (241)
T ss_dssp CEEEEEECSTTSSHHHHH
T ss_pred CCEEEEECCCCCCHHHHH
Confidence 456899999999999875
No 227
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=64.27 E-value=1.5 Score=33.66 Aligned_cols=17 Identities=29% Similarity=0.335 Sum_probs=14.6
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
+++++.|++|+|||...
T Consensus 1 k~V~ivG~~~~GKTsLl 17 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLF 17 (207)
T ss_dssp CEEEEECSTTSSHHHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 57899999999999653
No 228
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=63.96 E-value=1.5 Score=36.76 Aligned_cols=19 Identities=37% Similarity=0.511 Sum_probs=15.3
Q ss_pred cCCc--EEEeCCCCCcchHHh
Q 015129 76 KGLD--VIQQAQSGTGKTATF 94 (413)
Q Consensus 76 ~~~~--~li~~~tGsGKT~~~ 94 (413)
+|.+ ++.-|+||||||++.
T Consensus 82 ~G~n~~i~aYGqTGSGKTyTm 102 (330)
T d1ry6a_ 82 NGCVCSCFAYGQTGSGKTYTM 102 (330)
T ss_dssp HCCEEEEEEECCTTSSHHHHH
T ss_pred cCCCeEEEeeeccccccceee
Confidence 4765 466799999999985
No 229
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=63.83 E-value=1.5 Score=33.74 Aligned_cols=15 Identities=33% Similarity=0.293 Sum_probs=12.6
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+-|.|+.|||||.++
T Consensus 5 IgITG~igSGKStv~ 19 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIA 19 (205)
T ss_dssp EEEECSTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 347999999999875
No 230
>d2b2na1 c.37.1.19 (A:26-333) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=62.70 E-value=26 Score=28.33 Aligned_cols=91 Identities=13% Similarity=0.039 Sum_probs=57.0
Q ss_pred hcccceEEEEccHHHHHHHHHHhhhCC-CeeEEecCC------------CCHHHHHHHHHHHhcCCCcEEEEcC--CCCC
Q 015129 277 LAITQSVIFVNTRRKVDWLTDKMRSRD-HTVSATHGD------------MDQNTRDIIMREFRSGSSRVLITTD--LLAR 341 (413)
Q Consensus 277 ~~~~~~lif~~~~~~~~~l~~~L~~~~-~~~~~~~~~------------~~~~~r~~~~~~f~~~~~~vli~t~--~~~~ 341 (413)
...++++|.|++...|..+++.|+... ..+..+-+. ....+|.+++..+.+++..++|+|. .+..
T Consensus 12 ~~~~p~lvv~~~~~~A~~l~~~L~~~~~~~v~~fP~~e~lpyd~~s~~~~i~~~R~~~L~~l~~~~~~iiits~~al~~~ 91 (308)
T d2b2na1 12 RHAGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQR 91 (308)
T ss_dssp HCSSCEEEEESSHHHHHHHHHHHHTTCSSCEEECCCCCSCTTCSSCCCHHHHHHHHHHHHHGGGCCSSEEEEEHHHHTBC
T ss_pred hhCCCEEEEcCCHHHHHHHHHHHHhcCCCceEEcCCcccCccccCCCChHHHHHHHHHHHHHhhcCCceEEeechhhhhh
Confidence 345789999999999999999998642 233322111 1135678888888888888888874 2333
Q ss_pred CCCCCC---CcEEEEccCCCChhhHHHhh
Q 015129 342 GIDVQQ---VSLVINYDLPTQPENYLHRI 367 (413)
Q Consensus 342 G~d~~~---~~~vi~~~~~~s~~~~~Q~~ 367 (413)
...... ....+..|...+...+...+
T Consensus 92 ~~p~~~~~~~~~~l~~g~~~~~~~l~~~L 120 (308)
T d2b2na1 92 VCPHSFLHGHALVMKKGQRLSRDALRTQL 120 (308)
T ss_dssp CCCHHHHHHHCEEEETTCBCCHHHHHHHH
T ss_pred cccHHHHHHHHHhhhhhccccHHHHHHHH
Confidence 322221 23446666666665554433
No 231
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=61.70 E-value=1.2 Score=35.00 Aligned_cols=21 Identities=19% Similarity=0.240 Sum_probs=17.8
Q ss_pred hhcCCcEEEeCCCCCcchHHh
Q 015129 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~ 94 (413)
+.+|.-+-+.||.|+|||..+
T Consensus 22 I~~Gei~~iiG~nGaGKSTLl 42 (231)
T d1l7vc_ 22 VRAGEILHLVGPNGAGKSTLL 42 (231)
T ss_dssp EETTCEEECBCCTTSSHHHHH
T ss_pred EcCCCEEEEECCCCCcHHHHH
Confidence 456889999999999999753
No 232
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=61.60 E-value=3.2 Score=33.59 Aligned_cols=35 Identities=20% Similarity=0.402 Sum_probs=25.0
Q ss_pred CcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEc
Q 015129 78 LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLA 115 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~ 115 (413)
+-+++++.=|.|||.++...+......+. +++++-
T Consensus 9 ~~i~~sGKGGVGKTTvaa~lA~~lA~~G~---rVLlvD 43 (296)
T d1ihua1 9 PYLFFTGKGGVGKTSISCATAIRLAEQGK---RVLLVS 43 (296)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHHTTC---CEEEEE
T ss_pred eEEEEECCCcChHHHHHHHHHHHHHHCCC---CEEEEe
Confidence 55788999999999988666555444433 777765
No 233
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=61.30 E-value=1.7 Score=34.76 Aligned_cols=21 Identities=24% Similarity=0.240 Sum_probs=17.2
Q ss_pred hhcCCcEEEeCCCCCcchHHh
Q 015129 74 FCKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~ 94 (413)
+.+|.-+-+.||.|+|||..+
T Consensus 25 i~~GEi~~iiG~sGsGKSTLl 45 (258)
T d1b0ua_ 25 ARAGDVISIIGSSGSGKSTFL 45 (258)
T ss_dssp ECTTCEEEEECCTTSSHHHHH
T ss_pred EcCCCEEEEECCCCCcHHHHH
Confidence 345888999999999999653
No 234
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=60.85 E-value=1.4 Score=36.54 Aligned_cols=15 Identities=20% Similarity=0.231 Sum_probs=12.9
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
.+++||+|||||.+.
T Consensus 29 nvi~G~NGsGKS~il 43 (329)
T g1xew.1 29 TAIVGANGSGKSNIG 43 (329)
T ss_dssp EEEEECTTSSSHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 489999999999763
No 235
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=59.98 E-value=9.6 Score=25.68 Aligned_cols=49 Identities=12% Similarity=0.204 Sum_probs=32.4
Q ss_pred ceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEE
Q 015129 281 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 335 (413)
Q Consensus 281 ~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~ 335 (413)
|+||.=.....+..+...|+..|+.+...+.+ .+.++.+++..+++++.
T Consensus 2 rILiVdDd~~~~~~l~~~L~~~g~~v~~a~~~------~eal~~~~~~~~dlill 50 (117)
T d2a9pa1 2 KILIVDDEKPISDIIKFNMTKEGYEVVTAFNG------REALEQFEAEQPDIIIL 50 (117)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEESSH------HHHHHHHHHHCCSEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCEEEEECCH------HHHHHHHHhcCCCEEEe
Confidence 56666677777777888888877777655443 44555566666666554
No 236
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=59.76 E-value=3.9 Score=38.18 Aligned_cols=58 Identities=14% Similarity=0.330 Sum_probs=34.2
Q ss_pred ccCcccCCC-CHHHHHHHHHCCC--CCCcHH--HHhhhhhhhc---CCcEEEeCCCCCcchHHhHH
Q 015129 39 YDSFDAMGL-QENLLRGIYAYGF--EKPSAI--QQRGIVPFCK---GLDVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 39 ~~~~~~~~l-~~~~~~~l~~~~~--~~~~~~--Q~~~~~~i~~---~~~~li~~~tGsGKT~~~~~ 96 (413)
+.||..+++ ++.....-..... -.|..+ =..|+..+.. ++.+++.|..|||||.+.-.
T Consensus 48 iNP~~~~~~y~~~~~~~y~~~~~~~~~PHif~vA~~Ay~~l~~~~~~Q~IiisGeSGsGKTe~~k~ 113 (730)
T d1w7ja2 48 INPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKY 113 (730)
T ss_dssp ECCSSCCSCCSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHH
T ss_pred ECCCCCCCCCCHHHHHHHcCCCcCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCHHHHHHH
Confidence 567777764 3333333322211 123333 3456666543 67899999999999987644
No 237
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=59.74 E-value=3 Score=33.63 Aligned_cols=26 Identities=31% Similarity=0.317 Sum_probs=20.3
Q ss_pred hhcCCcEEEeCCCCCcchHHhHHHHH
Q 015129 74 FCKGLDVIQQAQSGTGKTATFCSGIL 99 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~~~~~~ 99 (413)
+.+|+...|.++.|+|||......+.
T Consensus 64 ig~GQr~~Ifg~~g~GKt~l~~~~~~ 89 (276)
T d1fx0a3 64 VGRGQRELIIGDRQTGKTAVATDTIL 89 (276)
T ss_dssp CBTTCBCBEEESSSSSHHHHHHHHHH
T ss_pred ccCCceEeeccCCCCChHHHHHHHHh
Confidence 44699999999999999976554433
No 238
>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=59.15 E-value=5 Score=27.92 Aligned_cols=38 Identities=8% Similarity=0.059 Sum_probs=32.4
Q ss_pred hcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCC
Q 015129 277 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMD 314 (413)
Q Consensus 277 ~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 314 (413)
...+++++||.+-..+...+..|.+.|+.+..+.|++.
T Consensus 78 ~~~~~ivl~C~~G~rS~~aa~~L~~~G~~v~~l~GG~~ 115 (130)
T d1yt8a4 78 VRGARLVLVDDDGVRANMSASWLAQMGWQVAVLDGLSE 115 (130)
T ss_dssp SBTCEEEEECSSSSHHHHHHHHHHHTTCEEEEECSCCG
T ss_pred CccceEEeecCCCccHHHHHHHHHHcCCCeEEEcCchH
Confidence 34568999999988888999999999999989988863
No 239
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=58.13 E-value=5.1 Score=33.18 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=23.1
Q ss_pred CcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHH
Q 015129 78 LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 119 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~ 119 (413)
..+-|.||+|+|||...- .+...+.......-++-+=|+..
T Consensus 55 ~~IgitG~pGaGKSTLi~-~l~~~~~~~g~~vavlavDpss~ 95 (327)
T d2p67a1 55 LRLGVTGTPGAGKSTFLE-AFGMLLIREGLKVAVIAVDPSSP 95 (327)
T ss_dssp EEEEEEECTTSCHHHHHH-HHHHHHHHTTCCEEEEEECCC--
T ss_pred eEEEeeCCCCCCHHHHHH-HHHHHHHhcCCceeeecCCCcee
Confidence 357889999999996643 33333333333334555556554
No 240
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=56.80 E-value=2.3 Score=32.80 Aligned_cols=19 Identities=26% Similarity=0.386 Sum_probs=16.1
Q ss_pred cCCcEEEeCCCCCcchHHh
Q 015129 76 KGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 76 ~~~~~li~~~tGsGKT~~~ 94 (413)
+|+=+.+.|+-|||||...
T Consensus 2 kGk~I~iEG~DGsGKST~~ 20 (214)
T d1tmka_ 2 RGKLILIEGLDRTGKTTQC 20 (214)
T ss_dssp CCCEEEEEESTTSSHHHHH
T ss_pred CeEEEEEECCCCCcHHHHH
Confidence 4666889999999999875
No 241
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=56.31 E-value=4.5 Score=32.36 Aligned_cols=33 Identities=18% Similarity=0.326 Sum_probs=21.4
Q ss_pred EEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEc
Q 015129 80 VIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLA 115 (413)
Q Consensus 80 ~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~ 115 (413)
++++|-=|.|||.++...+......+. +++++=
T Consensus 23 ii~sGKGGVGKTT~a~nLA~~lA~~G~---rVllvD 55 (279)
T d1ihua2 23 IMLMGKGGVGKTTMAAAIAVRLADMGF---DVHLTT 55 (279)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTC---CEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCC---cEEEEe
Confidence 567799999999887655554433332 655543
No 242
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=56.06 E-value=3.2 Score=31.55 Aligned_cols=17 Identities=18% Similarity=-0.003 Sum_probs=14.7
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
+.+++.||+++|||..+
T Consensus 54 n~i~~~GP~~TGKS~f~ 70 (205)
T d1tuea_ 54 NCLVFCGPANTGKSYFG 70 (205)
T ss_dssp SEEEEESCGGGCHHHHH
T ss_pred eEEEEECCCCccHHHHH
Confidence 56899999999999765
No 243
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=56.05 E-value=2 Score=36.91 Aligned_cols=16 Identities=19% Similarity=0.235 Sum_probs=13.2
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
-.+|.||+|+|||.+.
T Consensus 27 l~~i~G~NGsGKS~il 42 (427)
T d1w1wa_ 27 FTSIIGPNGSGKSNMM 42 (427)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3578999999999764
No 244
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=56.00 E-value=4.9 Score=30.38 Aligned_cols=15 Identities=20% Similarity=0.397 Sum_probs=13.0
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+.|.|.-|||||...
T Consensus 3 I~ieG~dGsGKST~~ 17 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLV 17 (208)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 578899999999875
No 245
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=55.98 E-value=3.4 Score=32.11 Aligned_cols=29 Identities=21% Similarity=0.275 Sum_probs=23.2
Q ss_pred HHHHhhhhhhhcCCcEEEeCCCCCcchHH
Q 015129 65 AIQQRGIVPFCKGLDVIQQAQSGTGKTAT 93 (413)
Q Consensus 65 ~~Q~~~~~~i~~~~~~li~~~tGsGKT~~ 93 (413)
....+.+..+++|+..++.|+.|.|||..
T Consensus 83 ~~g~~~L~~~l~~kt~~~~G~SGVGKSTL 111 (225)
T d1u0la2 83 GMGIEELKEYLKGKISTMAGLSGVGKSSL 111 (225)
T ss_dssp CTTHHHHHHHHSSSEEEEECSTTSSHHHH
T ss_pred chhHhhHHHHhcCCeEEEECCCCCCHHHH
Confidence 34455666677899999999999999965
No 246
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=55.67 E-value=2.5 Score=30.32 Aligned_cols=16 Identities=19% Similarity=0.374 Sum_probs=13.7
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|++|+|||...
T Consensus 2 kivlvG~~~vGKSsLi 17 (160)
T d1r8sa_ 2 RILMVGLDAAGKTTIL 17 (160)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999664
No 247
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=55.61 E-value=2.5 Score=33.31 Aligned_cols=20 Identities=30% Similarity=0.270 Sum_probs=16.6
Q ss_pred hcCCcEEEeCCCCCcchHHh
Q 015129 75 CKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 75 ~~~~~~li~~~tGsGKT~~~ 94 (413)
..|.-+-+.||.|+|||..+
T Consensus 26 ~~Gei~glvG~nGaGKSTLl 45 (238)
T d1vpla_ 26 EEGEIFGLIGPNGAGKTTTL 45 (238)
T ss_dssp CTTCEEEEECCTTSSHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHH
Confidence 35777889999999999764
No 248
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=55.27 E-value=2.5 Score=33.72 Aligned_cols=20 Identities=25% Similarity=0.351 Sum_probs=16.7
Q ss_pred hcCCcEEEeCCCCCcchHHh
Q 015129 75 CKGLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 75 ~~~~~~li~~~tGsGKT~~~ 94 (413)
.+|.-+-+.||.|+|||..+
T Consensus 28 ~~Gei~~liG~nGaGKSTLl 47 (254)
T d1g6ha_ 28 NKGDVTLIIGPNGSGKSTLI 47 (254)
T ss_dssp ETTCEEEEECSTTSSHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHH
Confidence 45788899999999999654
No 249
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=55.26 E-value=24 Score=23.77 Aligned_cols=51 Identities=10% Similarity=0.074 Sum_probs=34.6
Q ss_pred cceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEc
Q 015129 280 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336 (413)
Q Consensus 280 ~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t 336 (413)
+++||.=........+.+.|+..|+.+...+++ .+.++.+++.++++++.-
T Consensus 4 ~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~------~~a~~~l~~~~~dlii~D 54 (123)
T d1krwa_ 4 GIVWVVDDDSSIRWVLERALAGAGLTCTTFENG------NEVLAALASKTPDVLLSD 54 (123)
T ss_dssp CEEEEESSSHHHHHHHHHHHHHTTCEEEEESSS------HHHHHHHTTCCCSEEEEC
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCH------HHHHHHHHhCCCCEEEeh
Confidence 356666666677777788888888877766655 456666666677766653
No 250
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=54.97 E-value=2.6 Score=30.65 Aligned_cols=16 Identities=19% Similarity=0.343 Sum_probs=13.6
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|++|+|||...
T Consensus 4 ki~ivG~~~~GKTsLi 19 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTIL 19 (165)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5899999999999643
No 251
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=54.58 E-value=2.3 Score=34.26 Aligned_cols=43 Identities=14% Similarity=0.166 Sum_probs=24.1
Q ss_pred cCCCCHHHHHHHHHHHhc---CCCcEEEEcCCCCCCCCCCCCcEEEEcc
Q 015129 310 HGDMDQNTRDIIMREFRS---GSSRVLITTDLLARGIDVQQVSLVINYD 355 (413)
Q Consensus 310 ~~~~~~~~r~~~~~~f~~---~~~~vli~t~~~~~G~d~~~~~~vi~~~ 355 (413)
...+.+..+.++++.++. ....|+++|-.... ++ .++.+|.++
T Consensus 235 ~~~Ld~~~~~~l~~~l~~~~~~~~qviv~TH~~~~-~~--~~D~ii~l~ 280 (292)
T g1f2t.1 235 TPYLDEERRRKLITIMERYLKKIPQVILVSHDEEL-KD--AADHVIRIS 280 (292)
T ss_dssp SCTTCHHHHHHHHHHHHHTGGGSSEEEEEESCGGG-GG--GCSEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHHhCCCEEEEEeecHHH-HH--hCCEEEEEE
Confidence 355667776666665542 22478887754322 22 356777653
No 252
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=54.39 E-value=2.7 Score=33.10 Aligned_cols=17 Identities=18% Similarity=0.262 Sum_probs=13.3
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
.-+.+.||.|+|||...
T Consensus 25 e~~~liGpnGaGKSTll 41 (240)
T d2onka1 25 DYCVLLGPTGAGKSVFL 41 (240)
T ss_dssp SEEEEECCTTSSHHHHH
T ss_pred EEEEEECCCCChHHHHH
Confidence 34568999999999653
No 253
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=53.90 E-value=6.3 Score=31.82 Aligned_cols=37 Identities=19% Similarity=0.352 Sum_probs=30.7
Q ss_pred eeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchH
Q 015129 109 CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 149 (413)
Q Consensus 109 ~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (413)
.++||.|+++..++++...+++. |+++..++++.+..
T Consensus 37 gk~LVFcnSR~~aE~La~~L~~~----Gi~a~~~Hgglsq~ 73 (299)
T d1a1va2 37 GRHLIFCHSKKKCDELAAKLVAL----GINAVAYYRGLDVS 73 (299)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHT----TCCEEEECTTSCGG
T ss_pred CCEEEECCcHHHHHHHHHHHHHC----CCCEEEEeCCchHH
Confidence 38999999999999999988775 67888888876643
No 254
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.23 E-value=3.2 Score=32.11 Aligned_cols=75 Identities=11% Similarity=0.172 Sum_probs=46.8
Q ss_pred cccceEEEEccHHHHHHHHHHhhhC----CCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcCC------CCCCCCCCC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRSR----DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL------LARGIDVQQ 347 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~------~~~G~d~~~ 347 (413)
...++||++++++-+..+++.+... +..+..+.++....+ .......+..+|+|+|+. -...+++.+
T Consensus 79 ~~~~alil~Pt~eL~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~IvV~TP~rl~~~l~~~~~~~~~ 155 (218)
T d2g9na1 79 KATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRA---EVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKY 155 (218)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHHTTTTCCEEEECC--CCCS---TTTSSSSCCCSEEEECHHHHHHHHHTTSSCSTT
T ss_pred cCccEEEEcccchhhhhHHHHHhhhccccceeEEeeecccchhH---HHHHHhcCCCEEEEeCChhHHHHHhcCCccccc
Confidence 4457999999999998887777542 445555544432211 111223356789999972 244567778
Q ss_pred CcEEEEcc
Q 015129 348 VSLVINYD 355 (413)
Q Consensus 348 ~~~vi~~~ 355 (413)
+.++|...
T Consensus 156 l~~lVlDE 163 (218)
T d2g9na1 156 IKMFVLDE 163 (218)
T ss_dssp CCEEEEES
T ss_pred ceEEEeee
Confidence 99988653
No 255
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=52.99 E-value=7.2 Score=32.13 Aligned_cols=17 Identities=29% Similarity=0.411 Sum_probs=13.9
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
..+=|.||+|+|||...
T Consensus 52 ~~igitG~pGaGKSTli 68 (323)
T d2qm8a1 52 IRVGITGVPGVGKSTTI 68 (323)
T ss_dssp EEEEEECCTTSCHHHHH
T ss_pred eEEeeeCCCCCCHHHHH
Confidence 34788999999999664
No 256
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=52.50 E-value=6.1 Score=31.87 Aligned_cols=54 Identities=20% Similarity=0.144 Sum_probs=41.3
Q ss_pred eeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcCCcEEEEcc
Q 015129 109 CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 166 (413)
Q Consensus 109 ~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~T~ 166 (413)
.++++.|+++.-+..+.+.+++. +..+..++++...............++|+|.
T Consensus 179 ~~~lvf~~~~~~~~~l~~~L~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~lvaT~ 232 (305)
T d2bmfa2 179 GKTVWFVPSIKAGNDIAACLRKN----GKKVIQLSRKTFDSEYIKTRTNDWDFVVTTD 232 (305)
T ss_dssp SCEEEECSCHHHHHHHHHHHHHH----TCCCEECCTTCHHHHGGGGGTSCCSEEEECG
T ss_pred CCEEEEeccHHHHHHHHHHHHhC----CCCEEEeCCcChHHHHhhhhccchhhhhhhH
Confidence 47999999999999988888775 5566777887665554444556778999994
No 257
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=52.03 E-value=1 Score=34.26 Aligned_cols=15 Identities=27% Similarity=0.481 Sum_probs=12.4
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
.+|.||+|+|||.+.
T Consensus 27 tvi~G~NGsGKStil 41 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTM 41 (222)
T ss_dssp HHHHSCCSHHHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 467899999999763
No 258
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=51.99 E-value=3.1 Score=38.73 Aligned_cols=28 Identities=18% Similarity=0.268 Sum_probs=21.7
Q ss_pred Hhhhhhhhc---CCcEEEeCCCCCcchHHhH
Q 015129 68 QRGIVPFCK---GLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 68 ~~~~~~i~~---~~~~li~~~tGsGKT~~~~ 95 (413)
..|+..+.. ++.+++.|..|||||.+.-
T Consensus 79 ~~Ay~~m~~~~~~Q~IiisGeSGaGKTe~~k 109 (710)
T d1br2a2 79 DTAYRSMLQDREDQSILCTGESGAGKTENTK 109 (710)
T ss_dssp HHHHHHHHHHTCCEEEEEECSTTSSHHHHHH
T ss_pred HHHHHHHHHhCCCcEEEEEeCCCCCHHHHHH
Confidence 456666554 5789999999999998753
No 259
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=51.93 E-value=23 Score=23.83 Aligned_cols=49 Identities=8% Similarity=0.030 Sum_probs=34.0
Q ss_pred ceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEE
Q 015129 281 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 335 (413)
Q Consensus 281 ~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~ 335 (413)
++||.=.+...+..+...|+..|+.+...+.+ .+.++.+...++++++.
T Consensus 4 ~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~------~~al~~l~~~~~dlii~ 52 (121)
T d1xhfa1 4 HILIVEDELVTRNTLKSIFEAEGYDVFEATDG------AEMHQILSEYDINLVIM 52 (121)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTCEEEEESSH------HHHHHHHHHSCCSEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCEEEEECCh------HHHHHHHHhcCCCEEEe
Confidence 66777777788888888888888777655433 44555666667776665
No 260
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.60 E-value=2.7 Score=32.86 Aligned_cols=17 Identities=12% Similarity=0.139 Sum_probs=14.3
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
+-+++.|+.|||||..+
T Consensus 3 k~IviEG~~GsGKST~~ 19 (241)
T d2ocpa1 3 RRLSIEGNIAVGKSTFV 19 (241)
T ss_dssp EEEEEEECTTSSHHHHH
T ss_pred eEEEEECCCCCcHHHHH
Confidence 34789999999999874
No 261
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=51.13 E-value=2.6 Score=31.14 Aligned_cols=18 Identities=17% Similarity=0.182 Sum_probs=14.9
Q ss_pred CCcEEEeCCCCCcchHHh
Q 015129 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~ 94 (413)
...+++.|++|+|||...
T Consensus 13 ~~kI~lvG~~~vGKTsLl 30 (186)
T d1f6ba_ 13 TGKLVFLGLDNAGKTTLL 30 (186)
T ss_dssp CEEEEEEEETTSSHHHHH
T ss_pred CCEEEEECCCCCCHHHHH
Confidence 446899999999999653
No 262
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}
Probab=51.06 E-value=17 Score=24.47 Aligned_cols=29 Identities=10% Similarity=0.119 Sum_probs=14.3
Q ss_pred ceEEEEccHHHHHHHHHHhhhCCCeeEEe
Q 015129 281 QSVIFVNTRRKVDWLTDKMRSRDHTVSAT 309 (413)
Q Consensus 281 ~~lif~~~~~~~~~l~~~L~~~~~~~~~~ 309 (413)
|+||.=......+.+...|+..|+.+...
T Consensus 4 rILiVDDd~~~~~~l~~~L~~~g~~v~~a 32 (121)
T d1mvoa_ 4 KILVVDDEESIVTLLQYNLERSGYDVITA 32 (121)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCEEEEE
Confidence 44444444445555555555555544443
No 263
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=50.97 E-value=17 Score=24.44 Aligned_cols=49 Identities=2% Similarity=0.035 Sum_probs=25.8
Q ss_pred ceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEE
Q 015129 281 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 335 (413)
Q Consensus 281 ~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~ 335 (413)
|+||.=.+....+.+...|+..|+.+...+++ .+.++.++...+++++.
T Consensus 2 kILiVDD~~~~~~~l~~~L~~~g~~v~~a~~~------~~al~~l~~~~~dlil~ 50 (121)
T d1zesa1 2 RILVVEDEAPIREMVCFVLEQNGFQPVEAEDY------DSAVNQLNEPWPDLILL 50 (121)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEECSH------HHHHHHSSSSCCSEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCEEEEECCh------HHHHHHHHccCCCEEEe
Confidence 45555555556666666666666655544332 34444444444544443
No 264
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=50.04 E-value=3.1 Score=39.31 Aligned_cols=27 Identities=19% Similarity=0.222 Sum_probs=20.7
Q ss_pred hhhhhhhc---CCcEEEeCCCCCcchHHhH
Q 015129 69 RGIVPFCK---GLDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 69 ~~~~~i~~---~~~~li~~~tGsGKT~~~~ 95 (413)
.|+..+.. ++.+++.|..|||||.++=
T Consensus 112 ~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K 141 (794)
T d2mysa2 112 NAYQFMLTDRENQSILITGESGAGKTVNTK 141 (794)
T ss_dssp HHHHHHHHHTCCEEEEEEECTTSCHHHHHH
T ss_pred HHHHHHHHcCCCcEEEEEcCCCCCHHHHHH
Confidence 45555553 5679999999999997763
No 265
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=49.68 E-value=3.3 Score=34.22 Aligned_cols=16 Identities=25% Similarity=0.383 Sum_probs=13.3
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
-.+++|+.|+|||...
T Consensus 25 ~~vi~G~NgsGKTtil 40 (369)
T g1ii8.1 25 INLIIGQNGSGKSSLL 40 (369)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 4578999999999764
No 266
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=49.66 E-value=3.1 Score=33.93 Aligned_cols=15 Identities=20% Similarity=0.368 Sum_probs=13.0
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
.+++||.|+|||.+.
T Consensus 27 nvlvG~NgsGKS~iL 41 (308)
T d1e69a_ 27 TAIVGPNGSGKSNII 41 (308)
T ss_dssp EEEECCTTTCSTHHH
T ss_pred EEEECCCCCcHHHHH
Confidence 589999999999763
No 267
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=49.43 E-value=29 Score=26.66 Aligned_cols=97 Identities=13% Similarity=0.093 Sum_probs=54.6
Q ss_pred CCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHH---H--cCC
Q 015129 85 QSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL---Q--AGV 159 (413)
Q Consensus 85 ~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~ 159 (413)
...|||.... .-++..+.. .+.++||.+....-..-+...+.+. .+..+..++|+.+.......+ . ...
T Consensus 65 ~~~S~K~~~l-~~~l~~~~~--~g~kviIFs~~~~~~~~l~~~l~~~---~~~~~~~i~G~~~~~~R~~~i~~F~~~~~~ 138 (244)
T d1z5za1 65 VRRSGKMIRT-MEIIEEALD--EGDKIAIFTQFVDMGKIIRNIIEKE---LNTEVPFLYGELSKKERDDIISKFQNNPSV 138 (244)
T ss_dssp STTCHHHHHH-HHHHHHHHH--TTCCEEEEESCHHHHHHHHHHHHHH---HCSCCCEECTTSCHHHHHHHHHHHHHCTTC
T ss_pred hhhhhHHHHH-HHHHHhhcc--cccceEEEeeceehHHHHHHHHHhh---ccceEEEEecccchhccchhhhhhhccccc
Confidence 4567887653 334433322 2338999999887665555555433 256677788888766544332 2 245
Q ss_pred cEEEEccHHHHHHHHcCCCCCCcceEEEeccch
Q 015129 160 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 192 (413)
Q Consensus 160 ~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h 192 (413)
.++++|+... ..++++...+.+|+=+.+
T Consensus 139 ~vll~~~~~~-----g~Glnl~~a~~vi~~~~~ 166 (244)
T d1z5za1 139 KFIVLSVKAG-----GFGINLTSANRVIHFDRW 166 (244)
T ss_dssp CEEEEECCTT-----CCCCCCTTCSEEEECSCC
T ss_pred hhcccccccc-----ccccccchhhhhhhcCch
Confidence 7788876432 234455555555543343
No 268
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=49.40 E-value=2.8 Score=34.01 Aligned_cols=15 Identities=20% Similarity=0.344 Sum_probs=10.0
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+-|+|++|||||..+
T Consensus 7 IgIaG~SGSGKTTva 21 (288)
T d1a7ja_ 7 ISVTGSSGAGTSTVK 21 (288)
T ss_dssp EEEESCC---CCTHH
T ss_pred EEEECCCCCcHHHHH
Confidence 578999999999774
No 269
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=48.81 E-value=24 Score=23.74 Aligned_cols=106 Identities=10% Similarity=-0.005 Sum_probs=54.5
Q ss_pred EeccccchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhc--CCCcEEEEc
Q 015129 259 NVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRS--GSSRVLITT 336 (413)
Q Consensus 259 ~~~~~~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~--~~~~vli~t 336 (413)
.++........+...++.. +-. +..+.+-.++- +.+++....+..+.-.|+..+-.+..+.+++ ....|++.|
T Consensus 6 iVDD~~~~~~~l~~~L~~~-g~~-v~~a~~~~eal---~~~~~~~~dlvl~D~~mP~~~G~el~~~ir~~~~~~piI~lt 80 (121)
T d1ys7a2 6 VVDDDSDVLASLERGLRLS-GFE-VATAVDGAEAL---RSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLS 80 (121)
T ss_dssp EECSCHHHHHHHHHHHHHT-TCE-EEEESSHHHHH---HHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEE
T ss_pred EEECCHHHHHHHHHHHHHC-CCE-EEEECCHHHHH---HHHHhCCCCEEEEEeeccCcccHHHHHHHHhcCCCCEEEEEE
Confidence 3344444556666666543 223 33444434333 3444556677777666665555555555553 345666655
Q ss_pred CC-----CCCCCCCCCCcEEEEccCCCChhhHHHhhhhccC
Q 015129 337 DL-----LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGR 372 (413)
Q Consensus 337 ~~-----~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~R 372 (413)
.. ...+++....++ +--|.+..++..++-|+.|
T Consensus 81 ~~~~~~~~~~a~~~Ga~dy---l~KP~~~~~L~~~i~~~l~ 118 (121)
T d1ys7a2 81 ARSSVDDRVAGLEAGADDY---LVKPFVLAELVARVKALLR 118 (121)
T ss_dssp CCCTTTCCCTTTTTTCSEE---EESSCCHHHHHHHHHHHHH
T ss_pred eeCCHHHHHHHHHCCCCEE---EECCCCHHHHHHHHHHHHH
Confidence 43 223333322222 2346777777777666544
No 270
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=48.71 E-value=3.6 Score=32.16 Aligned_cols=15 Identities=20% Similarity=0.288 Sum_probs=13.2
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+-+.|+.|||||.++
T Consensus 4 IgiTG~igSGKsTva 18 (241)
T d1deka_ 4 IFLSGVKRSGKDTTA 18 (241)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 568999999999876
No 271
>d2b2na1 c.37.1.19 (A:26-333) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=48.58 E-value=14 Score=29.99 Aligned_cols=24 Identities=17% Similarity=0.350 Sum_probs=21.5
Q ss_pred eEEEEcCcHHHHHHHHHHHHHhhc
Q 015129 110 QALVLAPTRELAQQIEKVMRALGD 133 (413)
Q Consensus 110 ~~liv~P~~~l~~q~~~~~~~~~~ 133 (413)
.+|+|||+...+.++++.++.+..
T Consensus 16 p~lvv~~~~~~A~~l~~~L~~~~~ 39 (308)
T d2b2na1 16 PVVLIAPDMQNALRLHDEISQFTD 39 (308)
T ss_dssp CEEEEESSHHHHHHHHHHHHTTCS
T ss_pred CEEEEcCCHHHHHHHHHHHHhcCC
Confidence 899999999999999999987653
No 272
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]}
Probab=48.09 E-value=21 Score=29.93 Aligned_cols=72 Identities=17% Similarity=0.157 Sum_probs=53.9
Q ss_pred chHHHHHHHHHhhcccceEEEEccH----HHHHHHHHHhhhCCCeeEEecC---CCCHHHHHHHHHHHhcCCCcEEEEc
Q 015129 265 WKLETLCDLYETLAITQSVIFVNTR----RKVDWLTDKMRSRDHTVSATHG---DMDQNTRDIIMREFRSGSSRVLITT 336 (413)
Q Consensus 265 ~~~~~l~~~~~~~~~~~~lif~~~~----~~~~~l~~~L~~~~~~~~~~~~---~~~~~~r~~~~~~f~~~~~~vli~t 336 (413)
..++.+-+.+++...+++||++... ...+.+.+.|++.|+.+..+.+ +-+.++-.+..+.++..+++++|+.
T Consensus 16 g~l~~l~~~l~~~G~k~~Livt~~~~~~~g~~~~v~~~L~~~gi~~~vf~~v~~~p~~~~v~~~~~~~~~~~~D~Iiai 94 (385)
T d1rrma_ 16 GAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAI 94 (385)
T ss_dssp TGGGGHHHHHHHHTCCEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHHcCCCEEEEEECcchhhCcHHHHHHHHHHHcCCeEEEEcCccCCCCHHHHHHHhhhhhccCCCEEEec
Confidence 4667777778877778888887532 1346778888888988877655 4466777888888998889998883
No 273
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=48.01 E-value=4 Score=29.82 Aligned_cols=15 Identities=27% Similarity=0.426 Sum_probs=13.2
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
++++|++|+|||...
T Consensus 8 i~vvG~~~vGKTsLi 22 (169)
T d3raba_ 8 ILIIGNSSVGKTSFL 22 (169)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 899999999999654
No 274
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=47.72 E-value=18 Score=28.03 Aligned_cols=73 Identities=16% Similarity=0.221 Sum_probs=42.4
Q ss_pred eeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCC-cceEEE
Q 015129 109 CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD-YIKMFV 187 (413)
Q Consensus 109 ~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~-~~~~iV 187 (413)
.++||.|+++..+..+++.+... + ...+.................+|+|||... .+. ...++++. .+++||
T Consensus 26 ~~~iif~~~~~~~~~l~~~l~~~-----~-hg~~~~~~R~~~~~~f~~g~~~vLVaT~a~-~~v-~~rGlDip~~v~~VI 97 (248)
T d1gkub2 26 TGGIIYARTGEEAEEIYESLKNK-----F-RIGIVTATKKGDYEKFVEGEIDHLIGTAHY-YGT-LVRGLDLPERIRFAV 97 (248)
T ss_dssp SCEEEEESSHHHHHHHHHTTTTS-----S-CEEECTTSSSHHHHHHHHTSCSEEEEECC--------CCSCCTTTCCEEE
T ss_pred CCEEEEECCHHHHHHHHHHHHHh-----c-cCCCCHHHHHHHHHHHHhCCCeEEEEeccc-cch-hhhccCccccccEEE
Confidence 37899999999888877766542 1 112222222233344456788999999531 011 23466776 488888
Q ss_pred ec
Q 015129 188 LD 189 (413)
Q Consensus 188 ~D 189 (413)
.=
T Consensus 98 ~~ 99 (248)
T d1gkub2 98 FV 99 (248)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 275
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=47.47 E-value=4.2 Score=29.02 Aligned_cols=16 Identities=19% Similarity=0.312 Sum_probs=13.6
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|++|+|||...
T Consensus 2 KI~liG~~nvGKSSLl 17 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLL 17 (166)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999654
No 276
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=47.24 E-value=4 Score=32.49 Aligned_cols=17 Identities=29% Similarity=0.616 Sum_probs=14.7
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
-++++.|.||+|||...
T Consensus 33 l~I~LvG~tg~GKSSli 49 (257)
T d1h65a_ 33 LTILVMGKGGVGKSSTV 49 (257)
T ss_dssp EEEEEEESTTSSHHHHH
T ss_pred cEEEEECCCCCcHHHHH
Confidence 47899999999999764
No 277
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=47.19 E-value=4.1 Score=29.32 Aligned_cols=17 Identities=24% Similarity=0.507 Sum_probs=14.0
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
-.++++|.+|+|||...
T Consensus 6 ~kI~ivG~~~vGKSSLi 22 (169)
T d1upta_ 6 MRILILGLDGAGKTTIL 22 (169)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 35899999999999653
No 278
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=46.95 E-value=3.5 Score=38.87 Aligned_cols=29 Identities=17% Similarity=0.232 Sum_probs=21.4
Q ss_pred Hhhhhhhhc---CCcEEEeCCCCCcchHHhHH
Q 015129 68 QRGIVPFCK---GLDVIQQAQSGTGKTATFCS 96 (413)
Q Consensus 68 ~~~~~~i~~---~~~~li~~~tGsGKT~~~~~ 96 (413)
..|+..+.. ++.+++.|..|||||.+.=.
T Consensus 109 ~~Ay~~m~~~~~nQ~IiisGESGaGKTe~~K~ 140 (789)
T d1kk8a2 109 DNAYQNMVTDRENQSCLITGESGAGKTENTKK 140 (789)
T ss_dssp HHHHHHHHHHTSEEEEEEECSTTSSHHHHHHH
T ss_pred HHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHH
Confidence 355655553 57899999999999977533
No 279
>d2gc6a1 c.59.1.2 (A:297-425) Folylpolyglutamate synthetase, C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=46.87 E-value=16 Score=24.86 Aligned_cols=111 Identities=12% Similarity=0.066 Sum_probs=47.4
Q ss_pred EEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEEeeCCHhHHHHHHHhcCCCEEE-EecCCcc---cccCeEEEEEEe
Q 015129 185 MFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRI-LVKRDEL---TLEGIKQFYVNV 260 (413)
Q Consensus 185 ~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~ 260 (413)
.+++|=||.-. +.......+... .....+++++++-..+...++..+......+ ....... .+..........
T Consensus 13 ~iilD~AHN~~--~~~~l~~~l~~~-~~~~~~~v~g~~~dKd~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (129)
T d2gc6a1 13 LIVIDGAHNPD--GINGLITALKQL-FSQPITVIAGILADKDYAAMADRLTAAFSTVYLVPVPGTPRALPEAGYEALHEG 89 (129)
T ss_dssp TEEECCCCSHH--HHHHHHHHHHHH-CSSCCEEEECCC----CCSSSSTTTTTCSEEEECCCTTSCCCC-----------
T ss_pred cEEEECCCCHH--HHHHHhhccccc-cchhhhhhccccCCccHHHHHHhhhhhCCeEEEECCCCCcccChHHHHHHHHhc
Confidence 48999999742 222333333333 3344456666665554434433333333222 2221111 111111111111
Q ss_pred ccccchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHh
Q 015129 261 EKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 299 (413)
Q Consensus 261 ~~~~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L 299 (413)
.......+.+...++..+ +..++++-|...+..+.+.|
T Consensus 90 ~~~~~~~~ai~~a~~~~~-~~~vli~GS~ylvg~v~~~L 127 (129)
T d2gc6a1 90 RLKDSWQEALAASLNDVP-DQPIVITGSLYLASAVRQTL 127 (129)
T ss_dssp CBCSCHHHHHHHHHHHCT-TSCEEEESCHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhCC-CCcEEEEehHHHHHHHHHHh
Confidence 222334566666666544 34566667777666666655
No 280
>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=46.70 E-value=4.6 Score=27.58 Aligned_cols=36 Identities=8% Similarity=0.004 Sum_probs=30.3
Q ss_pred cccceEEEEccHHHHHHHHHHhhhCCC-eeEEecCCC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRSRDH-TVSATHGDM 313 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 313 (413)
+..++++||.+-..+......|...|. ++..+.|++
T Consensus 71 ~~~~iv~~C~~G~rs~~a~~~L~~~G~~nv~~l~GG~ 107 (119)
T d1tq1a_ 71 QSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGY 107 (119)
T ss_dssp TTSSEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCH
T ss_pred CCcEEEEEcCCcCcHHHHHHHHHhcccCCeEEecChH
Confidence 446899999988888889999999887 588888986
No 281
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=45.82 E-value=4.4 Score=29.31 Aligned_cols=16 Identities=19% Similarity=0.173 Sum_probs=13.5
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
++++.|+.|+|||...
T Consensus 4 ki~i~G~~~~GKTsLl 19 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFV 19 (164)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5789999999999653
No 282
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=45.77 E-value=22 Score=23.87 Aligned_cols=26 Identities=0% Similarity=-0.057 Sum_probs=14.2
Q ss_pred CCCeeEEecCCCCHHHHHHHHHHHhc
Q 015129 302 RDHTVSATHGDMDQNTRDIIMREFRS 327 (413)
Q Consensus 302 ~~~~~~~~~~~~~~~~r~~~~~~f~~ 327 (413)
....+..+.-.|+..+-.++.+.+++
T Consensus 44 ~~~dlil~D~~mp~~dG~el~~~ir~ 69 (123)
T d1mb3a_ 44 NKPDLILMDIQLPEISGLEVTKWLKE 69 (123)
T ss_dssp HCCSEEEEESBCSSSBHHHHHHHHHH
T ss_pred CCCCEEEEEeccCCCcHHHHHHHHHh
Confidence 34555555555555555555555543
No 283
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.63 E-value=4.5 Score=30.03 Aligned_cols=15 Identities=33% Similarity=0.539 Sum_probs=13.1
Q ss_pred cEEEeCCCCCcchHH
Q 015129 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~li~~~tGsGKT~~ 93 (413)
.+++.|++|+|||..
T Consensus 7 Ki~ivG~~~vGKTsL 21 (186)
T d2f7sa1 7 KLLALGDSGVGKTTF 21 (186)
T ss_dssp EEEEESCTTSSHHHH
T ss_pred EEEEECCCCcCHHHH
Confidence 378999999999965
No 284
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=45.49 E-value=4.5 Score=29.26 Aligned_cols=16 Identities=13% Similarity=0.358 Sum_probs=13.5
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|++|+|||...
T Consensus 4 Kv~liG~~~vGKSsLi 19 (164)
T d1z2aa1 4 KMVVVGNGAVGKSSMI 19 (164)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 3789999999999654
No 285
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=45.42 E-value=28 Score=23.28 Aligned_cols=69 Identities=10% Similarity=-0.022 Sum_probs=30.5
Q ss_pred cchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcC--CCcEEEEcC
Q 015129 264 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG--SSRVLITTD 337 (413)
Q Consensus 264 ~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~--~~~vli~t~ 337 (413)
......+...++.. +-.+..+.+-+.+. +.+.+....+..+.-.|+..+-.+..+.++.. ...|++.|.
T Consensus 11 ~~~~~~l~~~L~~~--g~~v~~a~~~~~al---~~l~~~~~dlillD~~mp~~~g~~~~~~lr~~~~~~piI~lt~ 81 (122)
T d1kgsa2 11 RDLADLITEALKKE--MFTVDVCYDGEEGM---YMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTA 81 (122)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEESSHHHHH---HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEES
T ss_pred HHHHHHHHHHHHHC--CCEEEEEcchHHHH---HHHHhhCccccccccccccchhHHHHHHHHhcCCCCcEEEEcC
Confidence 33444455555432 22233344433332 23344455566655555555444555544432 234444443
No 286
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=44.96 E-value=4.1 Score=29.77 Aligned_cols=16 Identities=31% Similarity=0.320 Sum_probs=14.0
Q ss_pred CcEEEeCCCCCcchHH
Q 015129 78 LDVIQQAQSGTGKTAT 93 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~ 93 (413)
..++++|.+|+|||..
T Consensus 16 ~kI~vvG~~~~GKSsL 31 (177)
T d1zj6a1 16 HKVIIVGLDNAGKTTI 31 (177)
T ss_dssp EEEEEEESTTSSHHHH
T ss_pred EEEEEECCCCCCHHHH
Confidence 4789999999999954
No 287
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.88 E-value=4.8 Score=29.48 Aligned_cols=16 Identities=25% Similarity=0.451 Sum_probs=13.4
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.++++|+.|+|||...
T Consensus 5 KivvvG~~~vGKTsli 20 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLL 20 (173)
T ss_dssp EEEEESSTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 4789999999999653
No 288
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=44.76 E-value=25 Score=23.53 Aligned_cols=28 Identities=7% Similarity=-0.022 Sum_probs=14.6
Q ss_pred ceEEEEccHHHHHHHHHHhhhCCCeeEE
Q 015129 281 QSVIFVNTRRKVDWLTDKMRSRDHTVSA 308 (413)
Q Consensus 281 ~~lif~~~~~~~~~l~~~L~~~~~~~~~ 308 (413)
|+||.=........+.+.|...|+.+..
T Consensus 3 rILvVDD~~~~~~~l~~~L~~~g~~v~~ 30 (119)
T d1peya_ 3 KILIVDDQSGIRILLNEVFNKEGYQTFQ 30 (119)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCEEEE
Confidence 4455545555555555555555555443
No 289
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=44.69 E-value=4.6 Score=30.47 Aligned_cols=15 Identities=27% Similarity=0.446 Sum_probs=13.3
Q ss_pred cEEEeCCCCCcchHH
Q 015129 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~li~~~tGsGKT~~ 93 (413)
.+++.|++|+|||..
T Consensus 5 ~V~lvG~~n~GKTSL 19 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSL 19 (209)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 579999999999965
No 290
>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=43.55 E-value=20 Score=23.96 Aligned_cols=37 Identities=8% Similarity=-0.005 Sum_probs=30.3
Q ss_pred cccceEEEEccHHHHHHHHHHhhhCCC-eeEEecCCCC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRSRDH-TVSATHGDMD 314 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~ 314 (413)
..+++++||.+=..+......|+..|. ++..+.|++.
T Consensus 81 ~~~~ii~yC~sG~~A~~~~~~L~~lG~~~v~~y~Gs~~ 118 (120)
T d1urha2 81 YDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWS 118 (120)
T ss_dssp SSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCC
T ss_pred ccCceEEEccchhHHHHHHHHHHHcCCCCceEcCCChh
Confidence 446899999998778888888888887 5888888864
No 291
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=43.53 E-value=5 Score=29.21 Aligned_cols=15 Identities=20% Similarity=0.361 Sum_probs=12.9
Q ss_pred cEEEeCCCCCcchHH
Q 015129 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~li~~~tGsGKT~~ 93 (413)
.+.+.|++|+|||..
T Consensus 2 ~V~liG~~n~GKSsL 16 (171)
T d1mkya1 2 TVLIVGRPNVGKSTL 16 (171)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 368999999999965
No 292
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.34 E-value=5.1 Score=29.14 Aligned_cols=16 Identities=25% Similarity=0.401 Sum_probs=13.4
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 4 Ki~lvG~~~vGKTsli 19 (168)
T d2atva1 4 KLAIFGRAGVGKSALV 19 (168)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999653
No 293
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=43.16 E-value=4.4 Score=29.07 Aligned_cols=16 Identities=19% Similarity=0.464 Sum_probs=13.6
Q ss_pred CcEEEeCCCCCcchHH
Q 015129 78 LDVIQQAQSGTGKTAT 93 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~ 93 (413)
-.+++.|++|+|||..
T Consensus 2 ~kI~lvG~~nvGKSsL 17 (161)
T d2gj8a1 2 MKVVIAGRPNAGKSSL 17 (161)
T ss_dssp EEEEEEESTTSSHHHH
T ss_pred CEEEEECCCCCCHHHH
Confidence 3688999999999954
No 294
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.96 E-value=5.9 Score=28.92 Aligned_cols=15 Identities=33% Similarity=0.563 Sum_probs=13.2
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
++++|+.|+|||...
T Consensus 9 I~vvG~~~vGKSSli 23 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLM 23 (174)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 889999999999654
No 295
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=42.93 E-value=8.1 Score=28.64 Aligned_cols=44 Identities=16% Similarity=0.196 Sum_probs=25.5
Q ss_pred EEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHH
Q 015129 80 VIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRA 130 (413)
Q Consensus 80 ~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~ 130 (413)
++|.|+.+||||.-+.- +... .++++||+-....-.++.+++.+
T Consensus 2 iLVtGGarSGKS~~AE~-----l~~~--~~~~~YiAT~~~~D~em~~RI~~ 45 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEA-----LIGD--APQVLYIATSQILDDEMAARIQH 45 (180)
T ss_dssp EEEEECTTSSHHHHHHH-----HHCS--CSSEEEEECCCC------CHHHH
T ss_pred EEEECCCCccHHHHHHH-----HHhc--CCCcEEEEccCCCCHHHHHHHHH
Confidence 58999999999976532 2222 23778888776655555555544
No 296
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.89 E-value=62 Score=25.14 Aligned_cols=69 Identities=12% Similarity=0.090 Sum_probs=48.2
Q ss_pred HHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHH-HHHHHHHHhc--CCCcEEEEcC
Q 015129 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT-RDIIMREFRS--GSSRVLITTD 337 (413)
Q Consensus 269 ~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-r~~~~~~f~~--~~~~vli~t~ 337 (413)
.+...+.+..+.++++.+.+.+.++.+.+.|+..+..+..+..+++..+ -.+..+.+.+ |.+++||..-
T Consensus 18 a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNA 89 (275)
T d1wmaa1 18 AIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNA 89 (275)
T ss_dssp HHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECC
T ss_pred HHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 3433333333568888898999999999999998888888888876544 3333444432 7899999865
No 297
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=42.86 E-value=4.1 Score=30.10 Aligned_cols=17 Identities=29% Similarity=0.530 Sum_probs=14.2
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
-.+++.|++|+|||...
T Consensus 18 ~KI~lvG~~~vGKTsLi 34 (182)
T d1moza_ 18 LRILILGLDGAGKTTIL 34 (182)
T ss_dssp EEEEEEEETTSSHHHHH
T ss_pred EEEEEECCCCCCHHHHH
Confidence 36899999999999653
No 298
>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=42.76 E-value=36 Score=22.57 Aligned_cols=49 Identities=16% Similarity=0.122 Sum_probs=32.1
Q ss_pred ceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEE
Q 015129 281 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 335 (413)
Q Consensus 281 ~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~ 335 (413)
|+||.=......+.+...|+..|+.+...+++ .+.++.+.+..+++++.
T Consensus 3 rILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~------~~a~~~~~~~~~dliil 51 (120)
T d1zgza1 3 HIVIVEDEPVTQARLQSYFTQEGYTVSVTASG------AGLREIMQNQSVDLILL 51 (120)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCEEEEESSH------HHHHHHHHHSCCSEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCEEEEECCH------HHHHHHHHhcCCCEEee
Confidence 56666667777777788887777776655442 34555566666666665
No 299
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=42.48 E-value=9.4 Score=29.24 Aligned_cols=31 Identities=29% Similarity=0.329 Sum_probs=19.6
Q ss_pred EEeCCCCCcchHHhHHHHHHccccCCCceeEEEE
Q 015129 81 IQQAQSGTGKTATFCSGILQQLDYGLVQCQALVL 114 (413)
Q Consensus 81 li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv 114 (413)
+..+--|.|||.++...+......+ .+++++
T Consensus 7 v~~~kGGvGKTtia~nLA~~la~~g---~~Vlli 37 (237)
T d1g3qa_ 7 IVSGKGGTGKTTVTANLSVALGDRG---RKVLAV 37 (237)
T ss_dssp EECSSTTSSHHHHHHHHHHHHHHTT---CCEEEE
T ss_pred EECCCCCCcHHHHHHHHHHHHHhCC---CCEEEE
Confidence 4446779999988765554433332 266666
No 300
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.19 E-value=5.5 Score=28.73 Aligned_cols=16 Identities=31% Similarity=0.366 Sum_probs=13.5
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 4 Kv~liG~~~vGKTsLl 19 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLT 19 (165)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 3789999999999654
No 301
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.98 E-value=5.5 Score=28.83 Aligned_cols=16 Identities=31% Similarity=0.455 Sum_probs=13.7
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.++++|+.|+|||...
T Consensus 5 Ki~lvG~~~vGKTsLi 20 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALT 20 (167)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 5799999999999653
No 302
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.89 E-value=5.6 Score=29.11 Aligned_cols=16 Identities=31% Similarity=0.530 Sum_probs=13.6
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 6 Ki~vvG~~~vGKTsLi 21 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLL 21 (175)
T ss_dssp EEEEESSTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 3789999999999654
No 303
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.80 E-value=5 Score=29.29 Aligned_cols=15 Identities=33% Similarity=0.532 Sum_probs=12.9
Q ss_pred cEEEeCCCCCcchHH
Q 015129 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~li~~~tGsGKT~~ 93 (413)
.+++.|++|+|||..
T Consensus 5 Ki~vvG~~~vGKTsl 19 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTF 19 (170)
T ss_dssp EEEEEECTTSSHHHH
T ss_pred EEEEECCCCcCHHHH
Confidence 478899999999965
No 304
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.72 E-value=5 Score=29.31 Aligned_cols=15 Identities=27% Similarity=0.521 Sum_probs=13.1
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+++.|+.|+|||...
T Consensus 8 I~lvG~~~vGKTsll 22 (174)
T d2bmea1 8 FLVIGNAGTGKSCLL 22 (174)
T ss_dssp EEEEESTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 889999999999653
No 305
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}
Probab=41.45 E-value=36 Score=22.61 Aligned_cols=27 Identities=7% Similarity=0.144 Sum_probs=12.0
Q ss_pred hhCCCeeEEecCCCCHHHHHHHHHHHh
Q 015129 300 RSRDHTVSATHGDMDQNTRDIIMREFR 326 (413)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~r~~~~~~f~ 326 (413)
++....+..+.-.|+..+-.+.++.++
T Consensus 41 ~~~~~dliilD~~mP~~~G~e~~~~i~ 67 (119)
T d2pl1a1 41 NEHIPDIAIVDLGLPDEDGLSLIRRWR 67 (119)
T ss_dssp HHSCCSEEEECSCCSSSCHHHHHHHHH
T ss_pred HhcccceeehhccCCCchhHHHHHHHH
Confidence 334445555544444444344444443
No 306
>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}
Probab=41.40 E-value=12 Score=24.80 Aligned_cols=36 Identities=8% Similarity=0.038 Sum_probs=30.6
Q ss_pred cccceEEEEccHHHHHHHHHHhhhCCC-eeEEecCCC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRSRDH-TVSATHGDM 313 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 313 (413)
+..+++++|.+-..+..++..|.+.|. ++..+.|++
T Consensus 57 ~~~~ivv~c~~g~rs~~~a~~L~~~G~~~v~~l~GG~ 93 (108)
T d1gmxa_ 57 FDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGF 93 (108)
T ss_dssp TTSCEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHH
T ss_pred ccCcccccCCCChHHHHHHHHHHHcCCCCEEEEcChH
Confidence 456899999998889999999999998 588888875
No 307
>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}
Probab=40.87 E-value=6.8 Score=27.50 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=30.7
Q ss_pred cccceEEEEccHHHHHHHHHHhhhCCC-eeEEecCCC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRSRDH-TVSATHGDM 313 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 313 (413)
+..++++||.+-..+..++..|...|+ ++..+.|++
T Consensus 81 ~~~~ivvyC~~G~rs~~aa~~L~~~G~~nV~~l~GG~ 117 (137)
T d1qxna_ 81 PEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGM 117 (137)
T ss_dssp TTSCEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCH
T ss_pred cccceeeeecccchHHHHHHHHHHcCCCcEEEecCHH
Confidence 456899999998888999999999988 588888885
No 308
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=40.76 E-value=5.1 Score=29.94 Aligned_cols=15 Identities=20% Similarity=0.401 Sum_probs=13.2
Q ss_pred cEEEeCCCCCcchHH
Q 015129 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~li~~~tGsGKT~~ 93 (413)
.+.+.|++|+|||..
T Consensus 25 ~I~lvG~~n~GKSTL 39 (195)
T d1svia_ 25 EIALAGRSNVGKSSF 39 (195)
T ss_dssp EEEEEEBTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 489999999999965
No 309
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=40.61 E-value=5.1 Score=29.46 Aligned_cols=16 Identities=25% Similarity=0.428 Sum_probs=13.5
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+||+|||...
T Consensus 2 ~I~lvG~~nvGKSsLi 17 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLI 17 (184)
T ss_dssp EEEEEEBTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999753
No 310
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.95 E-value=6.2 Score=28.65 Aligned_cols=15 Identities=27% Similarity=0.370 Sum_probs=13.1
Q ss_pred cEEEeCCCCCcchHH
Q 015129 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~li~~~tGsGKT~~ 93 (413)
.+++.|++|+|||..
T Consensus 4 Ki~viG~~~vGKTsL 18 (171)
T d2erxa1 4 RVAVFGAGGVGKSSL 18 (171)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 478999999999965
No 311
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.89 E-value=6.2 Score=28.58 Aligned_cols=16 Identities=25% Similarity=0.347 Sum_probs=13.6
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|..|+|||...
T Consensus 5 KivlvG~~~vGKTsLi 20 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLV 20 (167)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 4789999999999654
No 312
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=39.69 E-value=5.6 Score=29.03 Aligned_cols=15 Identities=20% Similarity=0.322 Sum_probs=13.4
Q ss_pred cEEEeCCCCCcchHH
Q 015129 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~li~~~tGsGKT~~ 93 (413)
.+++.|+.|+|||..
T Consensus 18 kI~vvG~~~vGKSsL 32 (176)
T d1fzqa_ 18 RILLLGLDNAGKTTL 32 (176)
T ss_dssp EEEEEESTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 589999999999955
No 313
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.54 E-value=6.4 Score=28.43 Aligned_cols=16 Identities=25% Similarity=0.391 Sum_probs=13.4
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 6 KivlvG~~~vGKTsli 21 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLL 21 (166)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 3789999999999653
No 314
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=39.48 E-value=7.4 Score=31.34 Aligned_cols=27 Identities=22% Similarity=0.279 Sum_probs=20.9
Q ss_pred hhcCCcEEEeCCCCCcchHHhHHHHHH
Q 015129 74 FCKGLDVIQQAQSGTGKTATFCSGILQ 100 (413)
Q Consensus 74 i~~~~~~li~~~tGsGKT~~~~~~~~~ 100 (413)
+.+|+...+.++.|.|||....-.+.+
T Consensus 65 ig~GQr~~If~~~g~GKt~ll~~~~~~ 91 (285)
T d2jdia3 65 IGRGQRELIIGDRQTGKTSIAIDTIIN 91 (285)
T ss_dssp CBTTCBCEEEESTTSSHHHHHHHHHHH
T ss_pred ccCCCEEEeecCCCCChHHHHHHHHHh
Confidence 456999999999999999775444443
No 315
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=39.48 E-value=13 Score=28.39 Aligned_cols=31 Identities=19% Similarity=0.290 Sum_probs=19.9
Q ss_pred EEeCCCCCcchHHhHHHHHHccccCCCceeEEEE
Q 015129 81 IQQAQSGTGKTATFCSGILQQLDYGLVQCQALVL 114 (413)
Q Consensus 81 li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv 114 (413)
+..+--|.|||.++...+......+ .+++++
T Consensus 6 v~s~KGGvGKTtia~nlA~~la~~g---~~Vlli 36 (232)
T d1hyqa_ 6 VASGKGGTGKTTITANLGVALAQLG---HDVTIV 36 (232)
T ss_dssp EEESSSCSCHHHHHHHHHHHHHHTT---CCEEEE
T ss_pred EECCCCCChHHHHHHHHHHHHHhCC---CCEEEE
Confidence 5568889999988765544433222 266665
No 316
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.07 E-value=6.4 Score=28.66 Aligned_cols=15 Identities=47% Similarity=0.618 Sum_probs=13.1
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+++.|++|+|||...
T Consensus 5 i~~vG~~~vGKSsLi 19 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLM 19 (175)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 789999999999654
No 317
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.90 E-value=5.9 Score=29.02 Aligned_cols=16 Identities=19% Similarity=0.362 Sum_probs=13.4
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 4 KivvvG~~~vGKTsLi 19 (177)
T d1kmqa_ 4 KLVIVGDGACGKTCLL 19 (177)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 4788999999999653
No 318
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.77 E-value=6.7 Score=28.46 Aligned_cols=16 Identities=19% Similarity=0.383 Sum_probs=13.6
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 8 Ki~vvG~~~vGKTsLi 23 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLV 23 (170)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 4789999999999653
No 319
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=38.66 E-value=21 Score=28.24 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=28.2
Q ss_pred HHHHHHHHCCCCCCcHHHHhhhhhhhcC-----CcEEEeCCCCCcchHHh
Q 015129 50 NLLRGIYAYGFEKPSAIQQRGIVPFCKG-----LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 50 ~~~~~l~~~~~~~~~~~Q~~~~~~i~~~-----~~~li~~~tGsGKT~~~ 94 (413)
.+.+.|.-.++ .|..++. ++..++.+ +-+++.||.++|||..+
T Consensus 74 ~i~~~l~~q~~-~~~~f~~-~l~~~L~~~~~k~n~~~l~G~~~tGKS~f~ 121 (267)
T d1u0ja_ 74 RIYKILELNGY-DPQYAAS-VFLGWATKKFGKRNTIWLFGPATTGKTNIA 121 (267)
T ss_dssp HHHHHHHHTTC-CHHHHHH-HHHHHHTTCSTTCCEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHcCc-CHHHHHH-HHHHHHcCCCCccEEEEEEcCCCCCHHHHH
Confidence 46666665565 5566665 44444432 34688999999999764
No 320
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.39 E-value=6.1 Score=28.87 Aligned_cols=16 Identities=25% Similarity=0.399 Sum_probs=13.6
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 8 Kv~lvG~~~vGKTsLi 23 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALT 23 (173)
T ss_dssp EEEEEECTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 5899999999999653
No 321
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.31 E-value=6.9 Score=28.40 Aligned_cols=16 Identities=38% Similarity=0.563 Sum_probs=13.5
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 8 Ki~vvG~~~vGKTsli 23 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLL 23 (170)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 3899999999999653
No 322
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=38.31 E-value=50 Score=21.91 Aligned_cols=84 Identities=18% Similarity=0.152 Sum_probs=47.7
Q ss_pred eeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEe
Q 015129 109 CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVL 188 (413)
Q Consensus 109 ~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~ 188 (413)
|++|+|=........+...++.. |+.+.. ..+.+.....+... .+++|++
T Consensus 2 PkILiVDD~~~~~~~l~~~L~~~----g~~v~~---------------------a~~~~eal~~~~~~-----~~dlvl~ 51 (121)
T d1ys7a2 2 PRVLVVDDDSDVLASLERGLRLS----GFEVAT---------------------AVDGAEALRSATEN-----RPDAIVL 51 (121)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT----TCEEEE---------------------ESSHHHHHHHHHHS-----CCSEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHC----CCEEEE---------------------ECCHHHHHHHHHhC-----CCCEEEE
Confidence 47777777777666666666553 444322 22334444455442 2578888
Q ss_pred ccchHHhccCcHHHHHHHHhhCCCCceEEEEEeeCCH
Q 015129 189 DEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPP 225 (413)
Q Consensus 189 DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT~~~ 225 (413)
|-- +.+.+-...+..+.+ ......++++|+....
T Consensus 52 D~~--mP~~~G~el~~~ir~-~~~~~piI~lt~~~~~ 85 (121)
T d1ys7a2 52 DIN--MPVLDGVSVVTALRA-MDNDVPVCVLSARSSV 85 (121)
T ss_dssp ESS--CSSSCHHHHHHHHHH-TTCCCCEEEEECCCTT
T ss_pred Eee--ccCcccHHHHHHHHh-cCCCCEEEEEEeeCCH
Confidence 843 233332344444444 4457789999988653
No 323
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.10 E-value=6.9 Score=28.36 Aligned_cols=15 Identities=33% Similarity=0.516 Sum_probs=12.8
Q ss_pred cEEEeCCCCCcchHH
Q 015129 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~li~~~tGsGKT~~ 93 (413)
.+++.|+.|+|||..
T Consensus 3 Ki~lvG~~~vGKTsL 17 (168)
T d2gjsa1 3 KVLLLGAPGVGKSAL 17 (168)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCcCHHHH
Confidence 378999999999954
No 324
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.10 E-value=6.2 Score=28.71 Aligned_cols=16 Identities=25% Similarity=0.383 Sum_probs=13.8
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 7 Ki~lvG~~~vGKTsLi 22 (171)
T d2erya1 7 RLVVVGGGGVGKSALT 22 (171)
T ss_dssp EEEEEECTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5899999999999654
No 325
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.09 E-value=6.9 Score=28.44 Aligned_cols=16 Identities=25% Similarity=0.439 Sum_probs=13.5
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 6 Ki~lvG~~~vGKTsll 21 (169)
T d1x1ra1 6 KLVVVGDGGVGKSALT 21 (169)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 4788999999999654
No 326
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=37.80 E-value=7 Score=28.60 Aligned_cols=15 Identities=20% Similarity=0.182 Sum_probs=13.1
Q ss_pred cEEEeCCCCCcchHH
Q 015129 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~li~~~tGsGKT~~ 93 (413)
.+.+.|.+|+|||..
T Consensus 7 ~I~lvG~~~~GKSSL 21 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTL 21 (178)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 478999999999965
No 327
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=37.56 E-value=11 Score=29.64 Aligned_cols=32 Identities=22% Similarity=0.186 Sum_probs=19.7
Q ss_pred EEEeCCCCCcchHHhHHHHHHccccCCCceeEEEE
Q 015129 80 VIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVL 114 (413)
Q Consensus 80 ~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv 114 (413)
+.+.+-=|.|||.++...+......+. +++++
T Consensus 4 Iai~gKGGvGKTT~a~nLA~~LA~~G~---rVllI 35 (269)
T d1cp2a_ 4 VAIYGKGGIGKSTTTQNLTSGLHAMGK---TIMVV 35 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTTTC---CEEEE
T ss_pred EEEECCCcCCHHHHHHHHHHHHHhCCC---cEEEE
Confidence 445677799999887655554433322 55554
No 328
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=36.99 E-value=74 Score=25.91 Aligned_cols=97 Identities=13% Similarity=0.071 Sum_probs=55.8
Q ss_pred CCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHH---HHc---C
Q 015129 85 QSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI---LQA---G 158 (413)
Q Consensus 85 ~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~ 158 (413)
+-.|||... +..++..+... .+.++||.+..+....-+.+.+. ..++.+..++|+.+....... +.. +
T Consensus 97 ~~~S~Kl~~-L~~ll~~~~~~-~g~KvlIFs~~~~~ld~l~~~l~----~~g~~~~~l~G~~~~~~R~~~i~~F~~~~~~ 170 (346)
T d1z3ix1 97 PQLSGKMLV-LDYILAMTRTT-TSDKVVLVSNYTQTLDLFEKLCR----NRRYLYVRLDGTMSIKKRAKIVERFNNPSSP 170 (346)
T ss_dssp GGGSHHHHH-HHHHHHHHHHH-CCCEEEEEESCHHHHHHHHHHHH----HHTCCEEEECSSCCHHHHHHHHHHHHSTTCC
T ss_pred cccCHHHHH-HHHHHHHHHHh-cCCceeEEeehhhhhHHHHHHHh----hhhccccccccchhHHHHHHHHHhhhccccc
Confidence 445899754 44444433222 23489999998876554444444 447888888998886654433 222 2
Q ss_pred CcEEEEccHHHHHHHHcCCCCCCcceEEEeccch
Q 015129 159 VHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 192 (413)
Q Consensus 159 ~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h 192 (413)
..+++.++.. -..++++...+.||+=+.+
T Consensus 171 ~~vlLls~~a-----gg~GlnL~~a~~vi~~d~~ 199 (346)
T d1z3ix1 171 EFIFMLSSKA-----GGCGLNLIGANRLVMFDPD 199 (346)
T ss_dssp CCEEEEEGGG-----SCTTCCCTTEEEEEECSCC
T ss_pred ceeeeecchh-----hhhccccccceEEEEecCC
Confidence 2356655432 1235566666666655554
No 329
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.91 E-value=7.5 Score=28.07 Aligned_cols=16 Identities=25% Similarity=0.422 Sum_probs=13.5
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.++++|..|+|||...
T Consensus 5 KivvvG~~~vGKTsli 20 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALT 20 (167)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999653
No 330
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]}
Probab=36.82 E-value=59 Score=27.10 Aligned_cols=72 Identities=6% Similarity=0.085 Sum_probs=52.0
Q ss_pred hHHHHHHHHHhhcccceEEEEcc--HH---HHHHHHHHhhhCCCeeEEecC---CCCHHHHHHHHHHHhcCCCcEEEEcC
Q 015129 266 KLETLCDLYETLAITQSVIFVNT--RR---KVDWLTDKMRSRDHTVSATHG---DMDQNTRDIIMREFRSGSSRVLITTD 337 (413)
Q Consensus 266 ~~~~l~~~~~~~~~~~~lif~~~--~~---~~~~l~~~L~~~~~~~~~~~~---~~~~~~r~~~~~~f~~~~~~vli~t~ 337 (413)
.++.+.+.++....++++|++.. .+ ..+.+.+.|++.+..+..+++ +-+.+.-.+..+.++..+++++|+.-
T Consensus 21 ~~~~l~~~l~~~g~~rvliVt~~~~~~~~g~~~~l~~~L~~~gi~~~~f~~v~~~pt~~~v~~~~~~~~~~~~D~IIavG 100 (398)
T d1vlja_ 21 TIPKIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVG 100 (398)
T ss_dssp CGGGHHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHhcCCCeEEEEECCcHHHHhhHHHHHHHHHHhcCCeEEEEcCccCCCCHHHHHHHhhhcccccCceEEecC
Confidence 45667777777766788877743 22 357888899999998887754 33556667788888888888888753
No 331
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=36.78 E-value=6.1 Score=29.02 Aligned_cols=16 Identities=25% Similarity=0.289 Sum_probs=13.5
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
++.+.|.+|+|||..+
T Consensus 3 ~VaivG~~nvGKSTLi 18 (180)
T d1udxa2 3 DVGLVGYPNAGKSSLL 18 (180)
T ss_dssp SEEEECCGGGCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4788999999999764
No 332
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=36.71 E-value=59 Score=22.22 Aligned_cols=44 Identities=9% Similarity=0.038 Sum_probs=27.8
Q ss_pred cceEEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEEeeCCHhHH
Q 015129 182 YIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEAL 228 (413)
Q Consensus 182 ~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~ 228 (413)
.+++|++| .+ +.+.+-...+..+... .+..++|++||....+..
T Consensus 44 ~~dlil~D-~~-mP~~~G~el~~~lr~~-~~~~pvI~lT~~~~~~~~ 87 (140)
T d1qkka_ 44 FAGIVISD-IR-MPGMDGLALFRKILAL-DPDLPMILVTGHGDIPMA 87 (140)
T ss_dssp CCSEEEEE-SC-CSSSCHHHHHHHHHHH-CTTSCEEEEECGGGHHHH
T ss_pred CcchHHHh-hc-cCCCCHHHHHHHHHHh-CCCCcEEEEECCCCHHHH
Confidence 36889998 33 4444433445555554 456889999998765443
No 333
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=36.67 E-value=7.4 Score=29.88 Aligned_cols=17 Identities=12% Similarity=0.214 Sum_probs=14.3
Q ss_pred CCcEEEeCCCCCcchHH
Q 015129 77 GLDVIQQAQSGTGKTAT 93 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~ 93 (413)
...+++.|+.|+|||..
T Consensus 6 ~~KilllG~~~vGKTsl 22 (221)
T d1azta2 6 THRLLLLGAGESGKSTI 22 (221)
T ss_dssp SEEEEEECSTTSSHHHH
T ss_pred cCEEEEECCCCCCHHHH
Confidence 35689999999999955
No 334
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=36.65 E-value=7.6 Score=28.14 Aligned_cols=16 Identities=38% Similarity=0.486 Sum_probs=13.7
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 6 KivlvG~~~vGKTsli 21 (168)
T d1u8za_ 6 KVIMVGSGGVGKSALT 21 (168)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 5899999999999653
No 335
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=36.41 E-value=6 Score=28.84 Aligned_cols=16 Identities=19% Similarity=0.372 Sum_probs=13.8
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 14 kIvlvG~~~vGKTSli 29 (173)
T d1e0sa_ 14 RILMLGLDAAGKTTIL 29 (173)
T ss_dssp EEEEEEETTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5899999999999653
No 336
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.30 E-value=7.6 Score=28.03 Aligned_cols=16 Identities=25% Similarity=0.470 Sum_probs=13.6
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|..|.|||...
T Consensus 6 Ki~lvG~~~vGKTsli 21 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIM 21 (167)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 4789999999999654
No 337
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=35.70 E-value=42 Score=22.22 Aligned_cols=24 Identities=8% Similarity=-0.001 Sum_probs=12.0
Q ss_pred CCeeEEecCCCCHHHHHHHHHHHh
Q 015129 303 DHTVSATHGDMDQNTRDIIMREFR 326 (413)
Q Consensus 303 ~~~~~~~~~~~~~~~r~~~~~~f~ 326 (413)
...+..+.-.|+..+-.+..+.++
T Consensus 46 ~~dliilD~~mp~~~G~e~~~~ir 69 (118)
T d1u0sy_ 46 KPDIVTMDITMPEMNGIDAIKEIM 69 (118)
T ss_dssp CCSEEEEECSCGGGCHHHHHHHHH
T ss_pred cCCEEEEecCCCCCCHHHHHHHHH
Confidence 455555555555544444444443
No 338
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.57 E-value=7.9 Score=28.79 Aligned_cols=16 Identities=13% Similarity=0.341 Sum_probs=13.3
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|..|+|||...
T Consensus 4 KivllG~~~vGKTsll 19 (200)
T d1zcba2 4 KILLLGAGESGKSTFL 19 (200)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999643
No 339
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.57 E-value=8 Score=28.14 Aligned_cols=15 Identities=27% Similarity=0.496 Sum_probs=13.0
Q ss_pred cEEEeCCCCCcchHH
Q 015129 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~li~~~tGsGKT~~ 93 (413)
.+++.|+.|+|||..
T Consensus 5 Kv~lvG~~~vGKTsL 19 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTL 19 (172)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCcCHHHH
Confidence 478999999999955
No 340
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=35.44 E-value=7.9 Score=31.91 Aligned_cols=16 Identities=38% Similarity=0.432 Sum_probs=13.7
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+.|.|+-|+|||..+
T Consensus 6 rI~IEG~iGsGKTTl~ 21 (329)
T d1e2ka_ 6 RVYIDGPHGMGKTTTT 21 (329)
T ss_dssp EEEECSCTTSSHHHHH
T ss_pred EEEEECCcCCCHHHHH
Confidence 4788999999999764
No 341
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.38 E-value=7.3 Score=27.97 Aligned_cols=16 Identities=19% Similarity=0.358 Sum_probs=13.4
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|..|+|||...
T Consensus 2 Kv~vvG~~~vGKTsLi 17 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLI 17 (164)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 4789999999999654
No 342
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=35.38 E-value=6.8 Score=28.83 Aligned_cols=18 Identities=22% Similarity=0.434 Sum_probs=14.6
Q ss_pred CCcEEEeCCCCCcchHHh
Q 015129 77 GLDVIQQAQSGTGKTATF 94 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~~ 94 (413)
+-++.+.|.+|+|||...
T Consensus 8 ~~kV~iiG~~~~GKSTLi 25 (186)
T d1mkya2 8 AIKVAIVGRPNVGKSTLF 25 (186)
T ss_dssp CEEEEEECSTTSSHHHHH
T ss_pred CCEEEEECCCCCCHHHHH
Confidence 346899999999999653
No 343
>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}
Probab=35.23 E-value=77 Score=23.11 Aligned_cols=116 Identities=13% Similarity=0.183 Sum_probs=70.8
Q ss_pred ceEEEEccHHHHHHHHHHhhhC--CCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcC----CCCCCCCCCCCcEEEEc
Q 015129 281 QSVIFVNTRRKVDWLTDKMRSR--DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD----LLARGIDVQQVSLVINY 354 (413)
Q Consensus 281 ~~lif~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~----~~~~G~d~~~~~~vi~~ 354 (413)
|.+.++....-.+.+.+...+. ..++..+.+++.. .-..+.+....+.++++|+-. .+..-+|+| |+
T Consensus 2 p~i~~~~~srL~~l~~~i~~ey~~~~~i~v~~~~~e~-av~~~~~~~~~~~~DviISRG~ta~~ir~~~~iP----VV-- 74 (186)
T d2pjua1 2 PVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEK-AVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVP----VI-- 74 (186)
T ss_dssp CEEEEECCHHHHHHHHHHHTTTTTTCEEEEECCCHHH-HHHHHHHHTTTSCCSEEEEEHHHHHHHHTTCSSC----EE--
T ss_pred CEEEEEEHHHHHHHHHHHHHHhcCCceEEeecCcHHH-HHHHHHHHHHcCCCCEEEECchHHHHHHHhCCCC----EE--
Confidence 3445554444444344444432 2467777776532 223344555678899999853 456666766 33
Q ss_pred cCCCChhhHHHhhhhccCCCCcceEEEEeccCcHHHHHHHHHHhccccccC
Q 015129 355 DLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 405 (413)
Q Consensus 355 ~~~~s~~~~~Q~~GR~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (413)
..+.|.-+++|.+-++.+.+. +.-++-...-...+..+.+.++......
T Consensus 75 ~I~vs~~Dil~al~~a~~~~~--kiavV~~~~~~~~~~~~~~ll~~~i~~~ 123 (186)
T d2pjua1 75 LIKPSGYDVLQFLAKAGKLTS--SIGVVTYQETIPALVAFQKTFNLRLDQR 123 (186)
T ss_dssp EECCCHHHHHHHHHHTTCTTS--CEEEEEESSCCHHHHHHHHHHTCCEEEE
T ss_pred EEcCCHhHHHHHHHHHHHhCC--CEEEEeCCccchHHHHHHHHhCCceEEE
Confidence 346778899999999977643 3444444455677788888888776543
No 344
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=35.20 E-value=8.4 Score=28.30 Aligned_cols=16 Identities=25% Similarity=0.248 Sum_probs=13.4
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
++.+.|++++|||..+
T Consensus 3 ~VaiiG~~nvGKSSLi 18 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLL 18 (185)
T ss_dssp CEEEESSTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 4789999999999653
No 345
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.11 E-value=8.2 Score=28.38 Aligned_cols=16 Identities=19% Similarity=0.343 Sum_probs=13.6
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 7 KivviG~~~vGKTsli 22 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLL 22 (183)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4799999999999653
No 346
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.02 E-value=7.5 Score=28.22 Aligned_cols=16 Identities=25% Similarity=0.495 Sum_probs=13.3
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 7 Ki~lvG~~~vGKTsLi 22 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLV 22 (171)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 3789999999999653
No 347
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=34.87 E-value=13 Score=29.76 Aligned_cols=32 Identities=16% Similarity=0.267 Sum_probs=19.6
Q ss_pred EEEeCCCCCcchHHhHHHHHHccccCCCceeEEEE
Q 015129 80 VIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVL 114 (413)
Q Consensus 80 ~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv 114 (413)
+.+.+-=|.|||.++.-.+......+. ++|+|
T Consensus 5 IaisgKGGVGKTT~a~NLA~~LA~~G~---rVLlI 36 (289)
T d2afhe1 5 CAIYGKGGIGKSTTTQNLVAALAEMGK---KVMIV 36 (289)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHTTC---CEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCC---CEEEE
Confidence 455677799999887654444333332 65554
No 348
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=34.83 E-value=8.3 Score=27.87 Aligned_cols=16 Identities=13% Similarity=0.374 Sum_probs=13.3
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 5 Ki~vvG~~~vGKTsLi 20 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIV 20 (170)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 4789999999999653
No 349
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=34.81 E-value=7.6 Score=27.98 Aligned_cols=15 Identities=27% Similarity=0.558 Sum_probs=13.0
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+++.|+.|+|||...
T Consensus 5 i~vvG~~~vGKTSli 19 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLL 19 (166)
T ss_dssp EEEEESTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 789999999999653
No 350
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.58 E-value=6.9 Score=28.50 Aligned_cols=15 Identities=33% Similarity=0.547 Sum_probs=8.8
Q ss_pred cEEEeCCCCCcchHH
Q 015129 79 DVIQQAQSGTGKTAT 93 (413)
Q Consensus 79 ~~li~~~tGsGKT~~ 93 (413)
.+++.|.+|+|||..
T Consensus 8 Ki~vvG~~~vGKTsL 22 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCV 22 (173)
T ss_dssp EEEEECCCCC-----
T ss_pred EEEEECCCCcCHHHH
Confidence 378999999999964
No 351
>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=34.37 E-value=88 Score=23.57 Aligned_cols=121 Identities=12% Similarity=0.074 Sum_probs=67.3
Q ss_pred CCcHHHHhhhhhhhc--CCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEE
Q 015129 62 KPSAIQQRGIVPFCK--GLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKV 139 (413)
Q Consensus 62 ~~~~~Q~~~~~~i~~--~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~ 139 (413)
...|.|-+.+..+.+ +-.-++.-.|+.|-+..++. ..+.. +++++-+-.....+....+.+.+..- .-++
T Consensus 42 ~~~~~~g~~L~~L~~~~~~k~iLEiGT~~GyStl~la---~al~~---~g~v~tie~~~~~~~~A~~~~~~~g~--~~~i 113 (227)
T d1susa1 42 TTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATA---LAIPE---DGKILAMDINKENYELGLPVIKKAGV--DHKI 113 (227)
T ss_dssp SCCHHHHHHHHHHHHHHTCCEEEEECCGGGHHHHHHH---HHSCT---TCEEEEEESCCHHHHHHHHHHHHTTC--GGGE
T ss_pred ccCHHHHHHHHHHHHhcCCCcEEEecchhhhhHHHHH---hhCCC---CcEEEEEeccchhHHHHHHHHHHhcc--ccce
Confidence 355777777777655 44568899999999876533 23322 23666666665555444445554321 1123
Q ss_pred EEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccchHHhccCcHHHHHHHHhhCCCCc
Q 015129 140 HACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKV 214 (413)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~ 214 (413)
.++++.....+..+.........+|+|++|=.| ..|...+..+...++++.
T Consensus 114 --------------------~~~~g~a~~~L~~l~~~~~~~~~fD~iFiDa~k----~~y~~~~e~~~~ll~~gG 164 (227)
T d1susa1 114 --------------------DFREGPALPVLDEMIKDEKNHGSYDFIFVDADK----DNYLNYHKRLIDLVKVGG 164 (227)
T ss_dssp --------------------EEEESCHHHHHHHHHHCGGGTTCBSEEEECSCS----TTHHHHHHHHHHHBCTTC
T ss_pred --------------------eeeehHHHHHHHHHHhccccCCceeEEEeccch----hhhHHHHHHHHhhcCCCc
Confidence 344444433333332222223448899998555 235566666677776655
No 352
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.32 E-value=7.8 Score=28.49 Aligned_cols=16 Identities=31% Similarity=0.443 Sum_probs=13.4
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 4 KivliG~~~vGKTsli 19 (179)
T d1m7ba_ 4 KIVVVGDSQCGKTALL 19 (179)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 3689999999999654
No 353
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=34.16 E-value=7.8 Score=28.91 Aligned_cols=15 Identities=27% Similarity=0.525 Sum_probs=13.1
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+++.|+.|+|||...
T Consensus 9 ivvvG~~~vGKTsli 23 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLL 23 (194)
T ss_dssp EEEEESTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 789999999999653
No 354
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.78 E-value=8 Score=27.87 Aligned_cols=16 Identities=25% Similarity=0.416 Sum_probs=13.5
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 5 Ki~viG~~~vGKTsli 20 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALT 20 (166)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999653
No 355
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=33.75 E-value=5 Score=31.25 Aligned_cols=23 Identities=30% Similarity=0.533 Sum_probs=18.4
Q ss_pred hhhhhcCCcEEEeCCCCCcchHH
Q 015129 71 IVPFCKGLDVIQQAQSGTGKTAT 93 (413)
Q Consensus 71 ~~~i~~~~~~li~~~tGsGKT~~ 93 (413)
+...++++..++.|+.|.|||..
T Consensus 91 L~~~l~~~~~vl~G~SGVGKSSL 113 (231)
T d1t9ha2 91 IIPHFQDKTTVFAGQSGVGKSSL 113 (231)
T ss_dssp TGGGGTTSEEEEEESHHHHHHHH
T ss_pred HHHhhccceEEEECCCCccHHHH
Confidence 33445788899999999999965
No 356
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=33.65 E-value=8.9 Score=28.18 Aligned_cols=15 Identities=47% Similarity=0.618 Sum_probs=13.0
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
++++|.+|+|||...
T Consensus 5 v~vvG~~~vGKSSLi 19 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLM 19 (184)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCcCHHHHH
Confidence 789999999999653
No 357
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=33.46 E-value=18 Score=29.65 Aligned_cols=16 Identities=25% Similarity=0.287 Sum_probs=14.0
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+.+.|+-|+|||..+
T Consensus 8 rI~iEG~iGsGKSTl~ 23 (333)
T d1p6xa_ 8 RIYLDGVYGIGKSTTG 23 (333)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCccCCHHHHH
Confidence 5789999999999775
No 358
>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=33.25 E-value=63 Score=21.80 Aligned_cols=28 Identities=11% Similarity=0.084 Sum_probs=13.7
Q ss_pred ceEEEEccHHHHHHHHHHhhhCCCeeEE
Q 015129 281 QSVIFVNTRRKVDWLTDKMRSRDHTVSA 308 (413)
Q Consensus 281 ~~lif~~~~~~~~~l~~~L~~~~~~~~~ 308 (413)
++||.=......+.+.+.|+..|+.+..
T Consensus 10 ~ILiVDD~~~~~~~l~~~L~~~g~~v~~ 37 (133)
T d2ayxa1 10 MILVVDDHPINRRLLADQLGSLGYQCKT 37 (133)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHTSEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCEEEE
Confidence 3444444444455555555555554443
No 359
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=33.21 E-value=33 Score=23.57 Aligned_cols=26 Identities=19% Similarity=0.211 Sum_probs=11.5
Q ss_pred eEEEEccHHHHHHHHHHhhhCCCeeE
Q 015129 282 SVIFVNTRRKVDWLTDKMRSRDHTVS 307 (413)
Q Consensus 282 ~lif~~~~~~~~~l~~~L~~~~~~~~ 307 (413)
+||.=......+.+...|...|+.+.
T Consensus 4 ILiVDD~~~~~~~l~~~L~~~g~~v~ 29 (139)
T d1w25a1 4 ILVVDDIEANVRLLEAKLTAEYYEVS 29 (139)
T ss_dssp EEEECSSTTHHHHHHHHHHHTTCEEE
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEE
Confidence 34444444444444444444444443
No 360
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.15 E-value=8.4 Score=27.76 Aligned_cols=17 Identities=12% Similarity=0.100 Sum_probs=14.1
Q ss_pred CcEEEeCCCCCcchHHh
Q 015129 78 LDVIQQAQSGTGKTATF 94 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~ 94 (413)
..+++.|+.|+|||...
T Consensus 5 ~Kv~liG~~~vGKTsLl 21 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLT 21 (167)
T ss_dssp EEEEEEESTTSSHHHHH
T ss_pred eEEEEECCCCcCHHHHH
Confidence 45899999999999653
No 361
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.19 E-value=8.6 Score=28.36 Aligned_cols=16 Identities=19% Similarity=0.343 Sum_probs=13.5
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 11 Ki~lvG~~~vGKTsLi 26 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLL 26 (185)
T ss_dssp EEEEEECTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999653
No 362
>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}
Probab=32.07 E-value=65 Score=21.35 Aligned_cols=48 Identities=10% Similarity=0.025 Sum_probs=22.4
Q ss_pred ceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEE
Q 015129 281 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 334 (413)
Q Consensus 281 ~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli 334 (413)
++||.=........+.+.|+..|+.+...+++ .+.++...+..+++++
T Consensus 5 ~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~------~~al~~~~~~~~dlvi 52 (123)
T d1dbwa_ 5 TVHIVDDEEPVRKSLAFMLTMNGFAVKMHQSA------EAFLAFAPDVRNGVLV 52 (123)
T ss_dssp EEEEEESSHHHHHHHHHHHHHTTCEEEEESCH------HHHHHHGGGCCSEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCEEEEECCH------HHHHHHHhhcCCcEEE
Confidence 44444444555555555555555554433322 3334444444444444
No 363
>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=31.88 E-value=23 Score=24.43 Aligned_cols=36 Identities=14% Similarity=0.074 Sum_probs=29.7
Q ss_pred cccceEEEEccHHHHHHHHHHhhhCCC-e-eEEecCCC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRSRDH-T-VSATHGDM 313 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~~~~-~-~~~~~~~~ 313 (413)
...++++||.+-..+...+..|...|. + +..+.|++
T Consensus 79 ~~~~iV~~C~~g~rs~~aa~~L~~~G~~~~V~~L~GG~ 116 (136)
T d1yt8a1 79 PRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGT 116 (136)
T ss_dssp TTSEEEEECSSSHHHHHHHHHHHHTTCSSCEEEETTHH
T ss_pred ccceEEEEcCCCCchHHHHHHHHHcCCCceEEEeCCcH
Confidence 345799999998888999999999988 3 77788874
No 364
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=31.87 E-value=17 Score=29.91 Aligned_cols=16 Identities=25% Similarity=0.355 Sum_probs=13.8
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+.|.|+-|+|||...
T Consensus 7 rI~IEG~iGsGKSTl~ 22 (331)
T d1osna_ 7 RIYLDGAYGIGKTTAA 22 (331)
T ss_dssp EEEEEESSSSCTTHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999775
No 365
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.85 E-value=11 Score=27.77 Aligned_cols=16 Identities=19% Similarity=0.343 Sum_probs=13.4
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 5 KvvllG~~~vGKTSli 20 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLL 20 (191)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 4789999999999653
No 366
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.46 E-value=9.1 Score=28.32 Aligned_cols=16 Identities=13% Similarity=0.297 Sum_probs=13.6
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|..|+|||...
T Consensus 4 Kiv~lG~~~vGKTsll 19 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFI 19 (200)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999654
No 367
>d1vl1a_ c.124.1.1 (A:) 6-phosphogluconolactonase {Thermotoga maritima [TaxId: 2336]}
Probab=31.35 E-value=29 Score=26.22 Aligned_cols=56 Identities=25% Similarity=0.284 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEeccch
Q 015129 119 ELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEAD 192 (413)
Q Consensus 119 ~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~DE~h 192 (413)
.++..+.+.+++.....+.-...+.||. ||..+++.+.+....++++.++.+||-.
T Consensus 14 ~~a~~i~~~~~~~~~~~~~~~i~lsGG~------------------tp~~~y~~L~~~~~~w~kv~~~~~DER~ 69 (218)
T d1vl1a_ 14 FVVEKIRTKMEKLLEEKDKIFVVLAGGR------------------TPLPVYEKLAEQKFPWNRIHFFLSDERY 69 (218)
T ss_dssp HHHHHHHHHHHHHHHHCSCEEEEECCST------------------THHHHHHHHTTSCCCGGGEEEEESEEES
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECCCh------------------hHHHHHHHHHhcCCCcceEEEEecceec
Confidence 3444455555554433344444555553 3444555555666778889999999954
No 368
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=30.83 E-value=9.3 Score=27.82 Aligned_cols=16 Identities=25% Similarity=0.491 Sum_probs=13.7
Q ss_pred CcEEEeCCCCCcchHH
Q 015129 78 LDVIQQAQSGTGKTAT 93 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~ 93 (413)
-.+.+.|.+++|||..
T Consensus 17 ~~I~lvG~~NvGKSSL 32 (188)
T d1puia_ 17 IEVAFAGRSNAGKSSA 32 (188)
T ss_dssp EEEEEEECTTSSHHHH
T ss_pred CEEEEECCCCCCHHHH
Confidence 4589999999999954
No 369
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.77 E-value=11 Score=27.52 Aligned_cols=16 Identities=25% Similarity=0.557 Sum_probs=13.5
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.++++|+.|+|||...
T Consensus 9 Ki~vvG~~~vGKTsli 24 (177)
T d1x3sa1 9 KILIIGESGVGKSSLL 24 (177)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 4789999999999653
No 370
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=30.68 E-value=48 Score=22.59 Aligned_cols=104 Identities=10% Similarity=0.058 Sum_probs=53.0
Q ss_pred eccccchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhc--CCCcEEEEcC
Q 015129 260 VEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRS--GSSRVLITTD 337 (413)
Q Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~--~~~~vli~t~ 337 (413)
++........+...++.. +--+..+.+-+.|. +.+.+....+..+.-.|+...-.+.++.+++ ....|++.|.
T Consensus 6 VDDd~~~~~~l~~~L~~~--g~~v~~a~~~~eAl---~~l~~~~~dlvilD~~mp~~~G~e~~~~lr~~~~~~piI~lT~ 80 (137)
T d1ny5a1 6 IEDDKVFRGLLEEYLSMK--GIKVESAERGKEAY---KLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITG 80 (137)
T ss_dssp ECCCHHHHHHHHHHHHHH--TCEEEEESSHHHHH---HHHHHSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEEE
T ss_pred EecCHHHHHHHHHHHHHC--CCEEEEECCHHHHH---HHhhccccccchHHHhhhhhhHHHHHHHHHHhCCCCCEEEEEC
Confidence 334344555566666543 22344555544443 3444556677776666665555555555543 3456666554
Q ss_pred C-----CCCCCCCCCCcEEEEccCCCChhhHHHhhhhcc
Q 015129 338 L-----LARGIDVQQVSLVINYDLPTQPENYLHRIGRSG 371 (413)
Q Consensus 338 ~-----~~~G~d~~~~~~vi~~~~~~s~~~~~Q~~GR~~ 371 (413)
. ...++.....+++. -|.+...+..++.|+.
T Consensus 81 ~~~~~~~~~a~~~Ga~dyl~---KP~~~~~L~~~i~~~l 116 (137)
T d1ny5a1 81 HGTIKTAVEAMKMGAYDFLT---KPCMLEEIELTINKAI 116 (137)
T ss_dssp TTCHHHHHHHHTTTCCEEEE---ESCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEe---CCCCHHHHHHHHHHHH
Confidence 2 12223332223332 3566666666666654
No 371
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=29.55 E-value=11 Score=27.59 Aligned_cols=16 Identities=13% Similarity=0.308 Sum_probs=13.4
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|..|+|||...
T Consensus 4 KivllG~~~vGKTsl~ 19 (195)
T d1svsa1 4 KLLLLGAGESGKSTIV 19 (195)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999653
No 372
>d1ozbi_ g.74.1.1 (I:) Preprotein translocase SecA C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=29.41 E-value=8 Score=17.99 Aligned_cols=9 Identities=33% Similarity=0.601 Sum_probs=6.7
Q ss_pred CCCCCcchH
Q 015129 84 AQSGTGKTA 92 (413)
Q Consensus 84 ~~tGsGKT~ 92 (413)
-|.||||-+
T Consensus 7 CpCgSgkky 15 (26)
T d1ozbi_ 7 CPCGSGKKY 15 (26)
T ss_dssp CTTTCSSBG
T ss_pred CCCCCCccH
Confidence 377899875
No 373
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.91 E-value=12 Score=27.36 Aligned_cols=16 Identities=13% Similarity=0.190 Sum_probs=13.8
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+++.|+.|+|||...
T Consensus 7 ki~vlG~~~vGKTsLi 22 (175)
T d2bmja1 7 RLGVLGDARSGKSSLI 22 (175)
T ss_dssp EEEEECCTTTTHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5789999999999654
No 374
>d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=28.83 E-value=59 Score=21.41 Aligned_cols=23 Identities=9% Similarity=0.095 Sum_probs=9.2
Q ss_pred CeeEEecCCCCHHHHHHHHHHHh
Q 015129 304 HTVSATHGDMDQNTRDIIMREFR 326 (413)
Q Consensus 304 ~~~~~~~~~~~~~~r~~~~~~f~ 326 (413)
..+..+.-.|+..+-.+..+..+
T Consensus 45 ~dliilD~~mP~~~G~e~~~~ir 67 (119)
T d1zh2a1 45 PDLIILDLGLPDGDGIEFIRDLR 67 (119)
T ss_dssp CSEEEEESEETTEEHHHHHHHHH
T ss_pred CCEEEeccccCCCCCchHHHHHH
Confidence 44444444444333333333333
No 375
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=28.50 E-value=47 Score=22.77 Aligned_cols=42 Identities=7% Similarity=0.028 Sum_probs=18.6
Q ss_pred HHHhhhCCCeeEEecCCCCHHHHHHHHHHHhc--CCCcEEEEcC
Q 015129 296 TDKMRSRDHTVSATHGDMDQNTRDIIMREFRS--GSSRVLITTD 337 (413)
Q Consensus 296 ~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~--~~~~vli~t~ 337 (413)
.+.+++....+....-.|+..+-.+.++..++ ....|++.|.
T Consensus 37 l~~l~~~~~dlil~D~~mP~~~G~el~~~lr~~~~~~pvI~lT~ 80 (140)
T d1qkka_ 37 LAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTG 80 (140)
T ss_dssp HHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEEC
T ss_pred HHHHhccCcchHHHhhccCCCCHHHHHHHHHHhCCCCcEEEEEC
Confidence 33444444555555444444333334433332 2344555553
No 376
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=27.55 E-value=14 Score=29.40 Aligned_cols=18 Identities=28% Similarity=0.172 Sum_probs=15.4
Q ss_pred CcEEEeCCCCCcchHHhH
Q 015129 78 LDVIQQAQSGTGKTATFC 95 (413)
Q Consensus 78 ~~~li~~~tGsGKT~~~~ 95 (413)
+|+.+.|..|+|||...-
T Consensus 7 Rni~i~gh~~~GKTtL~e 24 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTE 24 (276)
T ss_dssp EEEEEEECTTSCHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHH
Confidence 689999999999997543
No 377
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=27.29 E-value=1.2e+02 Score=22.97 Aligned_cols=69 Identities=12% Similarity=0.283 Sum_probs=47.5
Q ss_pred HHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHH-HHHHHHHHh--cCCCcEEEEcC
Q 015129 268 ETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT-RDIIMREFR--SGSSRVLITTD 337 (413)
Q Consensus 268 ~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-r~~~~~~f~--~~~~~vli~t~ 337 (413)
..+...+.. .+.++++...+.+.++.+.+.++..+..+..+..+.+..+ ....++... -|.+++||...
T Consensus 24 ~a~a~~la~-~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnna 95 (251)
T d2c07a1 24 REIAKMLAK-SVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNA 95 (251)
T ss_dssp HHHHHHHTT-TSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECC
T ss_pred HHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeecc
Confidence 444444432 3457777777888899999999988888888888876443 344444433 38999999865
No 378
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=27.24 E-value=14 Score=26.74 Aligned_cols=15 Identities=13% Similarity=0.319 Sum_probs=12.9
Q ss_pred EEEeCCCCCcchHHh
Q 015129 80 VIQQAQSGTGKTATF 94 (413)
Q Consensus 80 ~li~~~tGsGKT~~~ 94 (413)
+++.|.+|.|||...
T Consensus 8 I~iiG~~nvGKSSLi 22 (179)
T d1egaa1 8 IAIVGRPNVGKSTLL 22 (179)
T ss_dssp EEEECSSSSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 678999999999653
No 379
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=27.18 E-value=15 Score=28.48 Aligned_cols=17 Identities=18% Similarity=0.087 Sum_probs=14.1
Q ss_pred CCcEEEeCCCCCcchHH
Q 015129 77 GLDVIQQAQSGTGKTAT 93 (413)
Q Consensus 77 ~~~~li~~~tGsGKT~~ 93 (413)
++..+|.||.++|||..
T Consensus 41 ~~~~iiTGpN~~GKSt~ 57 (234)
T d1wb9a2 41 RRMLIITGPNMGGKSTY 57 (234)
T ss_dssp SCEEEEECCTTSSHHHH
T ss_pred ceEEEEeccCchhhHHH
Confidence 35579999999999954
No 380
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}
Probab=25.88 E-value=42 Score=24.49 Aligned_cols=79 Identities=18% Similarity=0.120 Sum_probs=43.4
Q ss_pred hcCCcEEEeCCC-CCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHH
Q 015129 75 CKGLDVIQQAQS-GTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 153 (413)
Q Consensus 75 ~~~~~~li~~~t-GsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (413)
++|+.++|.+.+ |.|+-.+.. +... +.+++++.-+.+-..+..+.+.... ...+.... ........
T Consensus 21 l~gK~vlItGasgGIG~~ia~~------la~~--G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~d--~~~~~~~~ 87 (191)
T d1luaa1 21 VKGKKAVVLAGTGPVGMRSAAL------LAGE--GAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAE--TADDASRA 87 (191)
T ss_dssp CTTCEEEEETTTSHHHHHHHHH------HHHT--TCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEE--CCSHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHH------HHhh--ccchhhcccchHHHHHHHHHHHhcc---chhhhhhh--cccHHHHH
Confidence 368999998854 556665532 1111 2377777777777777777666543 22222222 11122333
Q ss_pred HHHcCCcEEEEcc
Q 015129 154 ILQAGVHVVVGTP 166 (413)
Q Consensus 154 ~~~~~~~iii~T~ 166 (413)
....+.||+|.+.
T Consensus 88 ~~~~~iDilin~A 100 (191)
T d1luaa1 88 EAVKGAHFVFTAG 100 (191)
T ss_dssp HHTTTCSEEEECC
T ss_pred HHhcCcCeeeecC
Confidence 3345678888764
No 381
>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=25.32 E-value=25 Score=24.28 Aligned_cols=36 Identities=11% Similarity=0.016 Sum_probs=28.4
Q ss_pred cccceEEEEccHHHHHHHHHHhhhCCC-eeEEecCCC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRSRDH-TVSATHGDM 313 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 313 (413)
..+++++||.+-..+....-.|+..|. ++..+.|++
T Consensus 87 ~~~~vV~yC~~G~~a~~~~~~l~~~G~~~v~~ydGg~ 123 (136)
T d1e0ca2 87 PDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSW 123 (136)
T ss_dssp TTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHH
T ss_pred CCCceEEeCCChHHHHHHHHHHHHcCCCCcEEecCCH
Confidence 446899999987777778888888888 578888764
No 382
>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.20 E-value=36 Score=21.62 Aligned_cols=36 Identities=8% Similarity=0.105 Sum_probs=29.5
Q ss_pred cccceEEEEccHHHHHHHHHHhhhCCC-eeEEecCCC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRSRDH-TVSATHGDM 313 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 313 (413)
...+++++|++-..+..++..|.+.|. ++..+.|++
T Consensus 57 ~~~~vv~~~~~g~~s~~~~~~l~~~G~~nV~~l~GG~ 93 (101)
T d1yt8a2 57 RDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGL 93 (101)
T ss_dssp TTSCEEEECSSSSHHHHHHHHHHHTTCSSEEEETTHH
T ss_pred cCceeeeccchhhhHHHHHHHHHHcCCCcEEEeCChH
Confidence 345788888888889999999999987 577888874
No 383
>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}
Probab=24.72 E-value=28 Score=24.34 Aligned_cols=46 Identities=11% Similarity=0.045 Sum_probs=32.3
Q ss_pred HHHHHHHHhh---cccceEEEEccHHHHHHHHHHhhhCCC-eeEEecCCC
Q 015129 268 ETLCDLYETL---AITQSVIFVNTRRKVDWLTDKMRSRDH-TVSATHGDM 313 (413)
Q Consensus 268 ~~l~~~~~~~---~~~~~lif~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 313 (413)
+.+..++... ..+++++||.+--.+..+.-.|+..|. ++..+.|++
T Consensus 77 ~~l~~~~~~~gi~~~~~iI~yC~sG~~A~~~~~~l~~lG~~~v~~YdGsw 126 (144)
T d1rhsa2 77 EELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSW 126 (144)
T ss_dssp HHHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHH
T ss_pred HHHHHHHHHcCCCCCCCEEEEecccchHHHHHHHHHHcCCCCCEEeCCCH
Confidence 4455555443 446899999886666667777888888 578888864
No 384
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=24.57 E-value=90 Score=20.53 Aligned_cols=88 Identities=14% Similarity=0.097 Sum_probs=51.3
Q ss_pred eeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEe
Q 015129 109 CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVL 188 (413)
Q Consensus 109 ~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~ 188 (413)
+++|||=........+...++.. |+.+... .+.+.....+... .+++|++
T Consensus 4 ~~ILIVDDd~~~~~~l~~~L~~~----g~~v~~a---------------------~~~~~a~~~l~~~-----~~dlii~ 53 (123)
T d1krwa_ 4 GIVWVVDDDSSIRWVLERALAGA----GLTCTTF---------------------ENGNEVLAALASK-----TPDVLLS 53 (123)
T ss_dssp CEEEEESSSHHHHHHHHHHHHHT----TCEEEEE---------------------SSSHHHHHHHTTC-----CCSEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHC----CCEEEEe---------------------CCHHHHHHHHHhC-----CCCEEEe
Confidence 36777777777666655555553 4544332 3333444444432 3689999
Q ss_pred ccchHHhccCcHHHHHHHHhhCCCCceEEEEEeeCCHhHHH
Q 015129 189 DEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALE 229 (413)
Q Consensus 189 DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~ 229 (413)
| .+ +.+.+-...+..+.+.. +..++|++|+....+...
T Consensus 54 D-~~-mp~~~G~el~~~l~~~~-~~~piI~~t~~~~~~~~~ 91 (123)
T d1krwa_ 54 D-IR-MPGMDGLALLKQIKQRH-PMLPVIIMTAHSDLDAAV 91 (123)
T ss_dssp C-CS-SSSSTTHHHHHHHHHHS-SSCCEEESCCCSCHHHHH
T ss_pred h-hh-cCCchHHHHHHHHHHhC-CCCeEEEEecCCCHHHHH
Confidence 9 32 44444344555665554 467799999998765433
No 385
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=24.51 E-value=1.4e+02 Score=22.69 Aligned_cols=69 Identities=13% Similarity=0.133 Sum_probs=46.7
Q ss_pred HHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHH-HHHHHHHHhc--CCCcEEEEcC
Q 015129 268 ETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT-RDIIMREFRS--GSSRVLITTD 337 (413)
Q Consensus 268 ~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-r~~~~~~f~~--~~~~vli~t~ 337 (413)
..+...+.. .+-++++...+.+.++.+.+.+++.+..+..+..+.+..+ -...++...+ |.+++||...
T Consensus 25 ~aia~~la~-~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnA 96 (255)
T d1fmca_ 25 KEIAITFAT-AGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNA 96 (255)
T ss_dssp HHHHHHHHT-TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred HHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCC
Confidence 344443333 2346777777788889999999998888888888876543 3444444332 7899999864
No 386
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=24.32 E-value=76 Score=21.10 Aligned_cols=73 Identities=12% Similarity=0.063 Sum_probs=34.6
Q ss_pred eccccchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcC--CCcEEEEcC
Q 015129 260 VEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG--SSRVLITTD 337 (413)
Q Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~--~~~vli~t~ 337 (413)
++........+...++.. +-.+.-+.+- +...+.++.....+..+.-.|+..+-...++.++.. ...|++.|.
T Consensus 8 VDDd~~~~~~l~~~L~~~--g~~v~~a~~~---~~al~~~~~~~~dliilD~~mp~~~G~~~~~~i~~~~~~~~ii~lt~ 82 (128)
T d1yioa2 8 VDDDMSVREGLRNLLRSA--GFEVETFDCA---STFLEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITA 82 (128)
T ss_dssp ECSCHHHHHHHHHHHHTT--TCEEEEESSH---HHHHHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEES
T ss_pred EECCHHHHHHHHHHHHHc--CCCccccccH---HHHHHHHHhcCCCEeehhhhcccchhHHHHHHHHhhCCCCeEEEEEE
Confidence 344344455555555542 1222333332 233334455566666666666655555555555532 234444443
No 387
>d1zuna1 c.26.2.2 (A:1-211) Sulfate adenylyltransferase subunit 2, CysD {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=23.80 E-value=43 Score=24.26 Aligned_cols=73 Identities=10% Similarity=0.051 Sum_probs=36.1
Q ss_pred HHHHhhhhhhh----cCCcEEEeCCCCCcchHHhHHHHHHccccCCC-ceeEEEEcCcHHHHHHHHHHHHHhhcccCcEE
Q 015129 65 AIQQRGIVPFC----KGLDVIQQAQSGTGKTATFCSGILQQLDYGLV-QCQALVLAPTRELAQQIEKVMRALGDYLGVKV 139 (413)
Q Consensus 65 ~~Q~~~~~~i~----~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~-~~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~ 139 (413)
....+++..+. ++.++++. ...||--+.++.++........ ...++. +.+...-.+..+.++.+....++..
T Consensus 10 ~l~~~ai~~ir~~~~~~d~i~va--~SGGKDS~vlL~L~~~~~~~~~~~~~~v~-~d~~~~~~et~~~~~~~~~~~~~~~ 86 (211)
T d1zuna1 10 QLEAESIHIIREVAAEFDNPVML--YSIGKDSAVMLHLARKAFFPGKLPFPVMH-VDTRWKFQEMYRFRDQMVEEMGLDL 86 (211)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEE--CCSSHHHHHHHHHHHHHHTTSCCSSCEEE-ECCSCCCHHHHHHHHHHHHTTTCCE
T ss_pred HHHHHHHHHHHHHHHhcCCEEEE--eCCcHHHHHHHHHHHhhcccccCCeeEEE-ecCcccchhhHHHHHHHHHHhCCce
Confidence 34455554443 25555443 6789997777665544433222 223443 3333333344555555555555544
Q ss_pred E
Q 015129 140 H 140 (413)
Q Consensus 140 ~ 140 (413)
.
T Consensus 87 ~ 87 (211)
T d1zuna1 87 I 87 (211)
T ss_dssp E
T ss_pred E
Confidence 3
No 388
>d1o5za1 c.59.1.2 (A:294-430) Folylpolyglutamate synthetase, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=23.39 E-value=66 Score=21.70 Aligned_cols=54 Identities=17% Similarity=0.133 Sum_probs=31.9
Q ss_pred eEEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEEeeCCHhHHHHHHHhcCCCE
Q 015129 184 KMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPV 239 (413)
Q Consensus 184 ~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~~~~~~~~~~ 239 (413)
..+|+|=||.-.. ....+..+....+...-+++++.....+...++..+.....
T Consensus 11 ~~iilD~AHN~~a--~~~l~~~l~~~~~~~~~~~i~g~~~dkd~~~~l~~l~~~~~ 64 (137)
T d1o5za1 11 KMYILDGAHNPHG--AESLVRSLKLYFNGEPLSLVIGILDDKNREDILRKYTGIFE 64 (137)
T ss_dssp EEEEECCCCSHHH--HHHHHHHHHHHCTTCCEEEEECCCTTSCHHHHHGGGTTTCS
T ss_pred CEEEEECCCCHHH--HHHHHHHHHhhhccccceeeecccccccHHHHHHHHHhhcc
Confidence 4689999997532 23444455555555555555666666666666666555443
No 389
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=22.97 E-value=7.7 Score=27.62 Aligned_cols=16 Identities=13% Similarity=0.343 Sum_probs=13.4
Q ss_pred cEEEeCCCCCcchHHh
Q 015129 79 DVIQQAQSGTGKTATF 94 (413)
Q Consensus 79 ~~li~~~tGsGKT~~~ 94 (413)
.+.+.|.+|+|||...
T Consensus 2 kI~liG~~n~GKSSLi 17 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLL 17 (160)
T ss_dssp EEEEECCHHHHTCHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3689999999999664
No 390
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=22.81 E-value=22 Score=27.91 Aligned_cols=40 Identities=23% Similarity=0.286 Sum_probs=27.9
Q ss_pred ceEEEeccchHHhccCcHHHHHHHHhhCCC-CceEEEEEee
Q 015129 183 IKMFVLDEADEMLSRGFKDQIYDIFQLLPA-KVQVGVFSAT 222 (413)
Q Consensus 183 ~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~-~~~~i~~SaT 222 (413)
.+++++||.-..++......+..++..+.. ..|+++.|-.
T Consensus 226 ~~llllDEp~~~Ld~~~~~~l~~~l~~~~~~~~qviv~TH~ 266 (292)
T g1f2t.1 226 ISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHD 266 (292)
T ss_dssp CSEEEEESCSCTTCHHHHHHHHHHHHHTGGGSSEEEEEESC
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeec
Confidence 468999998877776666677777766644 3577776444
No 391
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.49 E-value=99 Score=20.26 Aligned_cols=88 Identities=10% Similarity=0.122 Sum_probs=49.6
Q ss_pred eeEEEEcCcHHHHHHHHHHHHHhhcccCcEEEEEEcCcchHHHHHHHHcCCcEEEEccHHHHHHHHcCCCCCCcceEEEe
Q 015129 109 CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVL 188 (413)
Q Consensus 109 ~~~liv~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~T~~~l~~~~~~~~~~~~~~~~iV~ 188 (413)
+++|++=............+++. |+.+.. ..+.+.....+... .+++||+
T Consensus 3 p~ILiVDDd~~~~~~l~~~L~~~----g~~v~~---------------------a~~~~~al~~l~~~-----~~dlii~ 52 (121)
T d1xhfa1 3 PHILIVEDELVTRNTLKSIFEAE----GYDVFE---------------------ATDGAEMHQILSEY-----DINLVIM 52 (121)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTT----TCEEEE---------------------ESSHHHHHHHHHHS-----CCSEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHC----CCEEEE---------------------ECChHHHHHHHHhc-----CCCEEEe
Confidence 47888888888777766666653 444432 22333344444432 3678888
Q ss_pred ccchHHhccCcHHHHHHHHhhCCCCceEEEEEeeCCHhHHHH
Q 015129 189 DEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEI 230 (413)
Q Consensus 189 DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~ 230 (413)
| .+ +.+.+-...+..+... +..+++++|+.........
T Consensus 53 D-~~-mp~~~G~~~~~~~r~~--~~~pii~lt~~~~~~~~~~ 90 (121)
T d1xhfa1 53 D-IN-LPGKNGLLLARELREQ--ANVALMFLTGRDNEVDKIL 90 (121)
T ss_dssp C-SS-CSSSCHHHHHHHHHHH--CCCEEEEEESCCSHHHHHH
T ss_pred e-cc-cCCccCcHHHHHHHhc--CCCcEEEEECCCCHHHHHH
Confidence 8 22 2233322333333332 3678999999877654433
No 392
>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]}
Probab=22.36 E-value=84 Score=21.45 Aligned_cols=58 Identities=17% Similarity=0.228 Sum_probs=33.2
Q ss_pred cceEEEEcc-----HHHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhcCCCcEEEEcCCCC
Q 015129 280 TQSVIFVNT-----RRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 340 (413)
Q Consensus 280 ~~~lif~~~-----~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~vli~t~~~~ 340 (413)
.|++|+.-| .+.|+.+++.+.+.|..+..++-. ......+...+.. ---|+++|++..
T Consensus 3 ~K~lIvY~S~~GnT~~vA~~Ia~~l~~~g~~v~~~~~~--~~~~~~~~~~~~~-~d~ii~Gspt~~ 65 (149)
T d1ycga1 3 AKAVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKLS--VSDRNDVIKEILD-ARAVLVGSPTIN 65 (149)
T ss_dssp SEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGG--GSCHHHHHHHHHH-CSEEEEECCCBT
T ss_pred cEEEEEEECCCcHHHHHHHHHHHHHHhcCCeeEEEEcc--ccchHHHhhhhhh-CCeEEEEeeccc
Confidence 356666533 577788888888888877766422 2222334443332 122667777654
No 393
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}
Probab=21.52 E-value=1.6e+02 Score=22.27 Aligned_cols=59 Identities=8% Similarity=0.099 Sum_probs=43.2
Q ss_pred ccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHH-HHHHHHHHHh--cCCCcEEEEcC
Q 015129 279 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN-TRDIIMREFR--SGSSRVLITTD 337 (413)
Q Consensus 279 ~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~-~r~~~~~~f~--~~~~~vli~t~ 337 (413)
+-++++...+.+.++.+.+.+++.+..+..+..+++.. .-...++... -|.+++||..-
T Consensus 26 Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnA 87 (257)
T d2rhca1 26 GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNA 87 (257)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECC
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEecc
Confidence 34677777788888999999998888888888887544 3444555443 28899999754
No 394
>g1qtn.1 c.17.1.1 (A:,B:) Caspase-8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.40 E-value=1e+02 Score=23.21 Aligned_cols=37 Identities=11% Similarity=0.109 Sum_probs=30.6
Q ss_pred HHHHHHHHHhhhCCCeeEEecCCCCHHHHHHHHHHHhc
Q 015129 290 RKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRS 327 (413)
Q Consensus 290 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~ 327 (413)
.+++.+.+.|++.|..+..+. +++.++-...++.|.+
T Consensus 43 ~Da~~l~~~l~~lGF~V~~~~-nlt~~~~~~~l~~~~~ 79 (242)
T g1qtn.1 43 LDAGALTTTFEELHFEIKPHD-DCTVEQIYEILKIYQL 79 (242)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE-SCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEECc-CCCHHHHHHHHHHhhh
Confidence 589999999999999876554 7888888888888864
No 395
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.09 E-value=1.6e+02 Score=22.18 Aligned_cols=70 Identities=9% Similarity=0.065 Sum_probs=48.6
Q ss_pred HHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCCeeEEecCCCCHHHH-HHHHHHH--hcCCCcEEEEcCC
Q 015129 268 ETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTR-DIIMREF--RSGSSRVLITTDL 338 (413)
Q Consensus 268 ~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r-~~~~~~f--~~~~~~vli~t~~ 338 (413)
..+...+.+ .+-++++..-+.+.++.+.+.+...+.++..+..+++..+. ...++.. +.|.+++||...-
T Consensus 21 ~~ia~~la~-~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag 93 (244)
T d1yb1a_ 21 RLTAYEFAK-LKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAG 93 (244)
T ss_dssp HHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCC
T ss_pred HHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeecc
Confidence 344443332 24578888888888999999998888888888888765543 4455544 3488999987653
No 396
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=20.90 E-value=1.2e+02 Score=20.42 Aligned_cols=57 Identities=11% Similarity=0.064 Sum_probs=34.0
Q ss_pred EccHHHHHHHHcCCCCCCcceEEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEEeeCCHhHH
Q 015129 164 GTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEAL 228 (413)
Q Consensus 164 ~T~~~l~~~~~~~~~~~~~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~ 228 (413)
.+.+.....+... .+++|++|-. +.+.+-...+..+... .+..++|++||....+..
T Consensus 31 ~~~~eAl~~l~~~-----~~dlvilD~~--mp~~~G~e~~~~lr~~-~~~~piI~lT~~~~~~~~ 87 (137)
T d1ny5a1 31 ERGKEAYKLLSEK-----HFNVVLLDLL--LPDVNGLEILKWIKER-SPETEVIVITGHGTIKTA 87 (137)
T ss_dssp SSHHHHHHHHHHS-----CCSEEEEESB--CSSSBHHHHHHHHHHH-CTTSEEEEEEETTCHHHH
T ss_pred CCHHHHHHHhhcc-----ccccchHHHh--hhhhhHHHHHHHHHHh-CCCCCEEEEECCCCHHHH
Confidence 3444555555543 3689999932 3444433455555444 457889999998765443
No 397
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}
Probab=20.70 E-value=69 Score=24.93 Aligned_cols=51 Identities=8% Similarity=0.083 Sum_probs=35.9
Q ss_pred CeEEEEEEeccccchHHHHHHHHHhhcccceEEEEccHHHHHHHHHHhhhCCC
Q 015129 252 GIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 304 (413)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lif~~~~~~~~~l~~~L~~~~~ 304 (413)
.....+..++.....++.+...++ ++++.++|+++.++++++.+.|++.|.
T Consensus 172 ~~D~V~~d~p~p~~~l~~~~~~LK--pGG~lv~~~P~~~Qv~~~~~~l~~~gF 222 (266)
T d1o54a_ 172 DVDALFLDVPDPWNYIDKCWEALK--GGGRFATVCPTTNQVQETLKKLQELPF 222 (266)
T ss_dssp SEEEEEECCSCGGGTHHHHHHHEE--EEEEEEEEESSHHHHHHHHHHHHHSSE
T ss_pred ceeeeEecCCCHHHHHHHHHhhcC--CCCEEEEEeCcccHHHHHHHHHHHCCc
Confidence 344455555554445555555544 567999999999999999999988764
No 398
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]}
Probab=20.61 E-value=1.3e+02 Score=24.25 Aligned_cols=72 Identities=10% Similarity=0.120 Sum_probs=47.6
Q ss_pred chHHHHHHHHHhhcccceEEEEcc--HH---HHHHHHHHhhhCCCeeEEe---cCCCCHHHHHHHHHHHhcCCCcEEEEc
Q 015129 265 WKLETLCDLYETLAITQSVIFVNT--RR---KVDWLTDKMRSRDHTVSAT---HGDMDQNTRDIIMREFRSGSSRVLITT 336 (413)
Q Consensus 265 ~~~~~l~~~~~~~~~~~~lif~~~--~~---~~~~l~~~L~~~~~~~~~~---~~~~~~~~r~~~~~~f~~~~~~vli~t 336 (413)
..++.+.+.++.. ++|++|++.. .+ ..+.+.+.|++.++.+..+ .++-+.+.-.++.+.++..+++++|+.
T Consensus 15 g~l~~l~~~~~~~-g~k~liV~~~~~~~~~g~~~~v~~~L~~~~i~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIav 93 (359)
T d1o2da_ 15 KILEKRGNIIDLL-GKRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVVGL 93 (359)
T ss_dssp THHHHHGGGGGGT-CSEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSEEEEE
T ss_pred CHHHHHHHHHHHc-CCeEEEEEcCcHHHHhhHHHHHHHHHHHcCCeEEEEcCccCCCCHHHHHHhhhhccccCCceEEec
Confidence 3556666666554 3566666532 22 3577888888888776553 445566777788888888888888875
Q ss_pred C
Q 015129 337 D 337 (413)
Q Consensus 337 ~ 337 (413)
-
T Consensus 94 G 94 (359)
T d1o2da_ 94 G 94 (359)
T ss_dssp E
T ss_pred c
Confidence 3
No 399
>d1e0ta3 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=20.61 E-value=35 Score=22.76 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=25.3
Q ss_pred EEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHH
Q 015129 81 IQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQ 123 (413)
Q Consensus 81 li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q 123 (413)
.+...|.||.|.-. +...++...++.++|....+.|
T Consensus 20 aIvv~T~sG~tar~-------iS~~RP~~pI~a~T~~~~~~r~ 55 (117)
T d1e0ta3 20 LIVVATQGGKSARA-------VRKYFPDATILALTTNEKTAHQ 55 (117)
T ss_dssp BEEEECSSSHHHHH-------HHTTCCSSBEEEEESCHHHHHH
T ss_pred EEEEEcCCChHHHH-------HHhhccCCceeeecCCHHHHHH
Confidence 56778899999542 3334555689999998876554
No 400
>d2piaa2 c.25.1.2 (A:104-223) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]}
Probab=20.60 E-value=31 Score=22.77 Aligned_cols=18 Identities=28% Similarity=0.444 Sum_probs=13.6
Q ss_pred CCcEEEEccHHHHHHHHc
Q 015129 158 GVHVVVGTPGRVFDMLRR 175 (413)
Q Consensus 158 ~~~iii~T~~~l~~~~~~ 175 (413)
...+++|-|..+.+.+..
T Consensus 90 ~~~~y~CGp~~mi~~v~~ 107 (120)
T d2piaa2 90 AQHVYCCGPQALMDTVRD 107 (120)
T ss_dssp TEEEEEESCHHHHHHHHH
T ss_pred cCEEEEeCCHHHHHHHHH
Confidence 457999999888776654
No 401
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=20.57 E-value=23 Score=28.21 Aligned_cols=41 Identities=20% Similarity=0.211 Sum_probs=28.0
Q ss_pred ceEEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEEeeC
Q 015129 183 IKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATM 223 (413)
Q Consensus 183 ~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT~ 223 (413)
..++++||....+.......+..++.......|+++.|-.|
T Consensus 242 ~~~~~iDEpe~~Lhp~~~~~l~~~l~~~~~~~QviitTHsp 282 (308)
T d1e69a_ 242 SPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVITHNK 282 (308)
T ss_dssp CSEEEEESCCSSCCHHHHHHHHHHHHHHTTTSEEEEECCCT
T ss_pred CchhhhhhccccCCHHHHHHHHHHHHHhccCCEEEEEECCH
Confidence 46899999876555555566666666555678998765444
No 402
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}
Probab=20.48 E-value=35 Score=24.54 Aligned_cols=48 Identities=10% Similarity=0.059 Sum_probs=32.2
Q ss_pred hcCCcEEEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHHHHHHHHH
Q 015129 75 CKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRA 130 (413)
Q Consensus 75 ~~~~~~li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q~~~~~~~ 130 (413)
.++++++|.|.=|+||+.++. + ..+. .++.|+.-+.+-++++.+.+..
T Consensus 16 ~~~k~vlIlGaGGaarai~~a---L---~~~~--~~i~I~nR~~~~a~~l~~~~~~ 63 (171)
T d1p77a1 16 RPNQHVLILGAGGATKGVLLP---L---LQAQ--QNIVLANRTFSKTKELAERFQP 63 (171)
T ss_dssp CTTCEEEEECCSHHHHTTHHH---H---HHTT--CEEEEEESSHHHHHHHHHHHGG
T ss_pred CCCCEEEEECCcHHHHHHHHH---H---cccC--ceeeeccchHHHHHHHHHHHhh
Confidence 367899999888888876652 2 2222 2777777777777777776654
No 403
>d1zl0a2 c.23.16.7 (A:3-169) LD-carboxypeptidase A, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.33 E-value=1.4e+02 Score=21.16 Aligned_cols=57 Identities=2% Similarity=-0.027 Sum_probs=37.0
Q ss_pred ceEEEEcc----HHHHHHHHHHhhhCCCeeEEe---------cCCCCHHHHHHHHHHHhcCCCcEEEEcC
Q 015129 281 QSVIFVNT----RRKVDWLTDKMRSRDHTVSAT---------HGDMDQNTRDIIMREFRSGSSRVLITTD 337 (413)
Q Consensus 281 ~~lif~~~----~~~~~~l~~~L~~~~~~~~~~---------~~~~~~~~r~~~~~~f~~~~~~vli~t~ 337 (413)
++-|..++ .+..+...+.|++.|..+..- .++...+...++.+.|.+.+++.++|..
T Consensus 15 ~I~iiAPS~~~~~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~dp~i~aI~~~r 84 (167)
T d1zl0a2 15 RVALIAPASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLR 84 (167)
T ss_dssp EEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESC
T ss_pred EEEEEeCCCcCCHHHHHHHHHHHHHCCCEEEECcccccccCcccCCHHHHHHHHHHhccCcCCCEEEECc
Confidence 45555544 355677778888877766542 2233444445667777888999999975
No 404
>d2vgba3 c.49.1.1 (A:440-573) Pyruvate kinase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.29 E-value=40 Score=23.08 Aligned_cols=36 Identities=17% Similarity=0.196 Sum_probs=25.4
Q ss_pred EEeCCCCCcchHHhHHHHHHccccCCCceeEEEEcCcHHHHHH
Q 015129 81 IQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQ 123 (413)
Q Consensus 81 li~~~tGsGKT~~~~~~~~~~~~~~~~~~~~liv~P~~~l~~q 123 (413)
.|+..|.+|+|.-. +..-++...++.++|....+.|
T Consensus 31 aIvv~T~sG~tar~-------vSk~RP~~pI~a~t~~~~~~r~ 66 (134)
T d2vgba3 31 AIIVLTTTGRSAQL-------LSRYRPRAAVIAVTRSAQAARQ 66 (134)
T ss_dssp EEEEECSSSHHHHH-------HHTTCCSSEEEEEESCHHHHHH
T ss_pred EEEEEcCCcHHHHH-------HHhhcCCCCeeeeeCCHHHHHH
Confidence 56777899999653 2233455689999998877655
No 405
>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.24 E-value=1.1e+02 Score=20.49 Aligned_cols=34 Identities=3% Similarity=-0.101 Sum_probs=21.3
Q ss_pred cccceEEEEccHHHHHHHHHHhhhCCCeeEEecC
Q 015129 278 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 311 (413)
Q Consensus 278 ~~~~~lif~~~~~~~~~l~~~L~~~~~~~~~~~~ 311 (413)
.+.++||.=.+......+.+.|+..|+.+....+
T Consensus 6 ~g~rILvVDD~~~~~~~l~~~L~~~G~~v~~a~~ 39 (134)
T d1dcfa_ 6 TGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSS 39 (134)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECC
Confidence 3446666666666666677777777776655544
No 406
>d2r25b1 c.23.1.1 (B:1087-1214) Response regulator Sin1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.02 E-value=1.2e+02 Score=20.15 Aligned_cols=48 Identities=13% Similarity=-0.027 Sum_probs=29.4
Q ss_pred CcceEEEeccchHHhccCcHHHHHHHHhhCCCCceEEEEEeeCCHhHHHH
Q 015129 181 DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEI 230 (413)
Q Consensus 181 ~~~~~iV~DE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SaT~~~~~~~~ 230 (413)
..+++|++|=. +.+.+-...+..+.+......+++++|+.........
T Consensus 50 ~~~dlillD~~--mP~~dG~el~~~ir~~~~~~~piI~lT~~~~~~~~~~ 97 (128)
T d2r25b1 50 ENYNMIFMDVQ--MPKVDGLLSTKMIRRDLGYTSPIVALTAFADDSNIKE 97 (128)
T ss_dssp CCCSEEEECSC--CSSSCHHHHHHHHHHHSCCCSCEEEEESCCSHHHHHH
T ss_pred CCCCEEEEEeC--CCCCCHHHHHHHHHHccCCCCeEEEEECCCCHHHHHH
Confidence 34788998843 2223323455555555555677999999877654443
Done!