Query 015130
Match_columns 413
No_of_seqs 216 out of 1591
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 07:14:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015130.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015130hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 5.6E-95 1.9E-99 732.9 45.2 393 19-413 4-400 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 3.3E-91 1.1E-95 710.8 46.6 390 20-413 31-427 (520)
3 3ifg_A Succinate-semialdehyde 100.0 6.2E-91 2.1E-95 704.2 46.1 389 21-413 12-401 (484)
4 3rh9_A Succinate-semialdehyde 100.0 2.3E-90 8E-95 702.3 47.8 391 19-413 9-401 (506)
5 1bxs_A Aldehyde dehydrogenase; 100.0 7.5E-90 2.6E-94 698.4 47.8 392 22-413 21-413 (501)
6 2o2p_A Formyltetrahydrofolate 100.0 5.5E-90 1.9E-94 701.3 46.6 392 22-413 37-432 (517)
7 3u4j_A NAD-dependent aldehyde 100.0 1.1E-89 3.9E-94 700.7 48.4 391 19-413 20-415 (528)
8 4f3x_A Putative aldehyde dehyd 100.0 7.7E-90 2.6E-94 697.9 45.2 390 18-413 22-414 (498)
9 3ek1_A Aldehyde dehydrogenase; 100.0 8.1E-90 2.8E-94 698.1 44.7 387 21-413 32-419 (504)
10 3b4w_A Aldehyde dehydrogenase; 100.0 2.3E-89 8E-94 694.5 47.7 392 20-413 7-400 (495)
11 1a4s_A ALDH, betaine aldehyde 100.0 5.8E-89 2E-93 692.8 48.6 389 20-413 18-413 (503)
12 3iwj_A Putative aminoaldehyde 100.0 4.1E-89 1.4E-93 694.5 46.4 392 20-413 6-406 (503)
13 3k2w_A Betaine-aldehyde dehydr 100.0 1.9E-89 6.7E-94 695.9 43.9 392 18-413 9-405 (497)
14 3i44_A Aldehyde dehydrogenase; 100.0 5.9E-89 2E-93 691.2 46.9 392 17-413 21-416 (497)
15 1o04_A Aldehyde dehydrogenase, 100.0 9.6E-89 3.3E-93 690.2 45.9 392 22-413 20-412 (500)
16 4e4g_A Methylmalonate-semialde 100.0 7.6E-89 2.6E-93 693.5 43.2 390 19-413 24-419 (521)
17 3r31_A BADH, betaine aldehyde 100.0 8.2E-89 2.8E-93 692.7 43.1 388 18-413 11-405 (517)
18 2imp_A Lactaldehyde dehydrogen 100.0 2.4E-88 8.1E-93 686.0 46.0 389 21-413 6-396 (479)
19 3jz4_A Succinate-semialdehyde 100.0 2.2E-88 7.5E-93 686.6 45.6 390 20-413 8-398 (481)
20 1wnd_A Putative betaine aldehy 100.0 1.9E-88 6.6E-93 687.1 44.6 394 14-413 16-412 (495)
21 2d4e_A 5-carboxymethyl-2-hydro 100.0 2.6E-88 9E-93 689.9 45.3 387 22-413 27-422 (515)
22 2ve5_A BADH, betaine aldehyde 100.0 2.8E-88 9.7E-93 687.7 45.2 395 16-413 1-400 (490)
23 3qan_A 1-pyrroline-5-carboxyla 100.0 3.5E-88 1.2E-92 691.1 45.3 386 21-413 37-430 (538)
24 3prl_A NADP-dependent glyceral 100.0 5.5E-88 1.9E-92 685.4 45.8 383 21-413 11-399 (505)
25 2j6l_A Aldehyde dehydrogenase 100.0 2.6E-87 9E-92 680.7 45.2 399 8-413 9-413 (500)
26 2w8n_A Succinate-semialdehyde 100.0 2.4E-87 8.2E-92 679.0 42.8 385 22-413 13-403 (487)
27 4dng_A Uncharacterized aldehyd 100.0 4.8E-87 1.6E-91 677.9 44.0 387 20-413 5-394 (485)
28 3r64_A NAD dependent benzaldeh 100.0 5.8E-87 2E-91 679.5 44.7 388 18-413 9-401 (508)
29 3pqa_A Lactaldehyde dehydrogen 100.0 8.6E-87 2.9E-91 673.7 42.4 376 24-413 2-381 (486)
30 1t90_A MMSDH, probable methylm 100.0 1.3E-86 4.5E-91 673.9 43.0 387 21-413 5-394 (486)
31 1euh_A NADP dependent non phos 100.0 1.7E-86 5.8E-91 671.7 43.4 382 20-413 3-390 (475)
32 1uzb_A 1-pyrroline-5-carboxyla 100.0 2.1E-86 7.2E-91 676.6 43.0 386 21-413 37-430 (516)
33 3ty7_A Putative aldehyde dehyd 100.0 1.6E-86 5.5E-91 672.9 41.3 387 20-413 6-395 (478)
34 3ros_A NAD-dependent aldehyde 100.0 2.6E-86 9E-91 669.8 42.0 371 38-413 5-375 (484)
35 1uxt_A Glyceraldehyde-3-phosph 100.0 4E-86 1.4E-90 671.7 42.1 383 20-413 17-408 (501)
36 3ju8_A Succinylglutamic semial 100.0 1.9E-85 6.4E-90 666.1 46.2 384 23-413 7-393 (490)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 2.6E-85 8.8E-90 671.4 41.3 388 20-413 62-460 (563)
38 3etf_A Putative succinate-semi 100.0 1.6E-83 5.5E-88 648.7 42.4 374 35-413 5-378 (462)
39 4f9i_A Proline dehydrogenase/d 100.0 1.2E-82 4.2E-87 685.0 43.4 388 20-413 530-924 (1026)
40 2y53_A Aldehyde dehydrogenase 100.0 2.8E-82 9.5E-87 649.2 37.8 383 21-412 7-415 (534)
41 4h7n_A Aldehyde dehydrogenase; 100.0 3.5E-82 1.2E-86 640.0 37.9 372 34-413 3-377 (474)
42 3lns_A Benzaldehyde dehydrogen 100.0 3.5E-78 1.2E-82 608.2 40.5 362 37-413 6-371 (457)
43 3v4c_A Aldehyde dehydrogenase 100.0 2.1E-78 7.3E-83 619.7 36.0 373 20-413 28-425 (528)
44 1ez0_A ALDH, aldehyde dehydrog 100.0 5.5E-77 1.9E-81 606.8 35.9 363 33-413 3-390 (510)
45 3sza_A Aldehyde dehydrogenase, 100.0 3E-76 1E-80 594.6 40.1 345 56-413 15-363 (469)
46 3haz_A Proline dehydrogenase; 100.0 5.4E-74 1.8E-78 616.6 37.7 352 53-413 544-899 (1001)
47 3my7_A Alcohol dehydrogenase/a 100.0 1.5E-66 5.3E-71 522.7 23.4 334 53-413 1-349 (452)
48 3k9d_A LMO1179 protein, aldehy 100.0 1.9E-66 6.5E-71 523.7 23.7 336 53-413 6-354 (464)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 3E-66 1E-70 520.6 20.6 321 40-413 10-348 (463)
50 1vlu_A Gamma-glutamyl phosphat 100.0 2.1E-64 7E-69 507.9 14.1 313 60-413 15-353 (468)
51 4ghk_A Gamma-glutamyl phosphat 100.0 3.9E-61 1.3E-65 482.1 25.3 306 58-413 25-352 (444)
52 1o20_A Gamma-glutamyl phosphat 100.0 3.8E-61 1.3E-65 479.9 22.8 305 57-413 12-335 (427)
53 4gic_A HDH, histidinol dehydro 87.6 21 0.0007 34.4 24.1 169 148-330 118-298 (423)
54 3v4g_A Arginine repressor; vib 68.8 21 0.00071 30.1 8.1 42 182-226 112-153 (180)
55 3lap_A Arginine repressor; arg 60.2 74 0.0025 26.5 11.4 42 181-226 106-147 (170)
56 3v42_A Folliculin; tumor suppr 55.8 12 0.00041 32.9 4.4 68 177-252 21-88 (226)
57 1b93_A Protein (methylglyoxal 51.0 26 0.00089 28.7 5.5 114 161-300 12-135 (152)
58 1kae_A HDH, histidinol dehydro 46.6 2.1E+02 0.007 27.6 22.2 191 123-330 88-292 (434)
59 1vmd_A MGS, methylglyoxal synt 43.5 21 0.00072 30.0 3.8 120 155-300 21-151 (178)
60 3fxd_A Protein ICMQ; helix bun 41.4 75 0.0026 21.0 6.1 47 56-108 5-51 (57)
61 2yvq_A Carbamoyl-phosphate syn 35.7 33 0.0011 27.6 3.8 63 206-270 60-132 (143)
62 2v9v_A Selenocysteine-specific 35.5 51 0.0017 25.7 5.0 83 290-372 36-124 (135)
63 1b4b_A Arginine repressor; cor 34.1 82 0.0028 21.8 5.3 57 186-259 12-68 (71)
64 2zfz_A Arginine repressor; DNA 33.2 89 0.003 22.2 5.4 37 186-226 20-56 (79)
65 1xxa_A ARGR, arginine represso 31.2 63 0.0022 22.9 4.3 38 186-226 14-51 (78)
66 3iwt_A 178AA long hypothetical 30.9 66 0.0023 26.6 5.2 53 199-251 39-94 (178)
67 2xw6_A MGS, methylglyoxal synt 30.4 16 0.00055 29.3 1.0 87 172-269 16-111 (134)
68 3pzy_A MOG; ssgcid, seattle st 29.6 59 0.002 26.7 4.5 52 200-252 27-80 (164)
69 2p5m_A Arginine repressor; alp 29.3 81 0.0028 22.6 4.7 56 186-258 24-79 (83)
70 1y5e_A Molybdenum cofactor bio 28.1 41 0.0014 27.8 3.3 54 198-251 29-85 (169)
71 2l82_A Designed protein OR32; 27.5 86 0.0029 23.8 4.6 104 241-370 5-108 (162)
72 2ioj_A Hypothetical protein AF 25.5 43 0.0015 26.5 2.9 43 217-259 53-95 (139)
73 3rfq_A Pterin-4-alpha-carbinol 24.5 64 0.0022 27.2 3.8 54 199-252 48-103 (185)
74 1use_A VAsp, vasodilator-stimu 24.0 79 0.0027 19.9 3.1 27 86-112 14-40 (45)
75 3u3x_A Oxidoreductase; structu 21.7 4.4E+02 0.015 24.1 9.7 89 230-335 80-170 (361)
76 3nol_A Glutamine cyclotransfer 20.1 1.2E+02 0.0041 27.0 4.9 33 25-57 179-212 (262)
77 1b4a_A Arginine repressor; hel 20.1 1.6E+02 0.0054 23.8 5.2 57 185-258 89-145 (149)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=5.6e-95 Score=732.85 Aligned_cols=393 Identities=42% Similarity=0.733 Sum_probs=375.7
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015130 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (413)
Q Consensus 19 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~ 98 (413)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++||++|++||. .|+++|..+|.++|++++++|++
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 4456899999999988889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeeccCCccceeeeeccceEEEeCCCchhHHhhHH
Q 015130 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (413)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (413)
|+++|++++++|+|||+.+++..|+..+++.++|++++++.+.+...+...+...+++++|+|||++|+|||||+++.++
T Consensus 82 ~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~ 161 (490)
T 2wme_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhh
Confidence 99999999999999999999864699999999999999988877776666677789999999999999999999999999
Q ss_pred HHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 015130 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (413)
Q Consensus 179 ~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (413)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 162 ~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~ 241 (490)
T 2wme_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASA 241 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred hHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999998765
Q ss_pred hhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCC
Q 015130 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (413)
Q Consensus 259 ~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~ 338 (413)
+.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||+++
T Consensus 242 a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 242 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 54789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 339 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
++++|||+++.+++++.++|++++++||++++||.+.. .+|+|++||||.+++++|++++||+||||++|++|+|
T Consensus 322 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 400 (490)
T 2wme_A 322 NTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD 400 (490)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESC
T ss_pred cCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCC
Confidence 99999999999999999999999999999999998643 3689999999999999999999999999999999986
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=3.3e-91 Score=710.82 Aligned_cols=390 Identities=39% Similarity=0.688 Sum_probs=372.7
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhc--ccCCCCCCCHHHHHHHHHHHHHHHH
Q 015130 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPRFSGAERRGIMLKFADLIE 97 (413)
Q Consensus 20 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~--~~~~W~~~~~~~R~~~L~~~a~~l~ 97 (413)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| . .|++++..+|.++|+++++.|+
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~ 108 (520)
T 3ed6_A 31 LSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIK 108 (520)
T ss_dssp SCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHH
T ss_pred cCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHH
Confidence 45678999999988788899999999999999999999999999999999999 8 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeecc-CCccceeeeeccceEEEeCCCchhHHhh
Q 015130 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMF 176 (413)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (413)
+++++|++++++|+|||+.+++. |+..+++.+++++.+++++.+...+.. .+...+++++|+|||++|+|||||+.+.
T Consensus 109 ~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 187 (520)
T 3ed6_A 109 EHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQA 187 (520)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHH
Confidence 99999999999999999999997 999999999999999887766554433 4566789999999999999999999999
Q ss_pred HHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHH
Q 015130 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (413)
Q Consensus 177 ~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (413)
+++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++
T Consensus 188 ~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~ 267 (520)
T 3ed6_A 188 SWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMK 267 (520)
T ss_dssp HHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987889999999999999999999999999999
Q ss_pred HHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCC
Q 015130 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (413)
Q Consensus 257 ~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~ 336 (413)
.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++|++|+++|+++++++++|||+
T Consensus 268 ~aa-~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~ 346 (520)
T 3ed6_A 268 NAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGF 346 (520)
T ss_dssp HHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTT
T ss_pred Hhh-hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCc
Confidence 999 8899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEEeCCCCCcccccccccceeEEEEec
Q 015130 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (413)
Q Consensus 337 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 412 (413)
++++++||++++.++++++++|++++++||++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 347 d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 426 (520)
T 3ed6_A 347 DADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFE 426 (520)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred cCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeC
Confidence 9999999999999999999999999999999999998642 469999999999999999999999999999999998
Q ss_pred C
Q 015130 413 K 413 (413)
Q Consensus 413 ~ 413 (413)
|
T Consensus 427 ~ 427 (520)
T 3ed6_A 427 T 427 (520)
T ss_dssp S
T ss_pred C
Confidence 6
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=6.2e-91 Score=704.17 Aligned_cols=389 Identities=37% Similarity=0.626 Sum_probs=372.2
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015130 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (413)
Q Consensus 21 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 100 (413)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+++|..+|.++|+++++.|++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45689999999877788999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeecc-CCccceeeeeccceEEEeCCCchhHHhhHHH
Q 015130 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (413)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (413)
++|++++++|+|||+.+++. |+..+++.+++++.+.++..+...+.. .+...+++++|+|||++|+|||||+...+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 99999999999999999986 999999999999998877665554432 4567889999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 015130 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (413)
Q Consensus 180 l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (413)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred hCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCC
Q 015130 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (413)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 339 (413)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.+++
T Consensus 249 -~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 -PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp -GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred -ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 340 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+++|||+++.++++++++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFAS 401 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECC
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCC
Confidence 99999999999999999999999999999999987545799999999999999999999999999999999986
No 4
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=2.3e-90 Score=702.34 Aligned_cols=391 Identities=32% Similarity=0.583 Sum_probs=373.7
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015130 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (413)
Q Consensus 19 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~ 98 (413)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|++++..+|.++|+++++.|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3556899999999887888999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeeccCCccceeee-eccceEEEeCCCchhHHhhH
Q 015130 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFF 177 (413)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~P~~~~~ 177 (413)
++++|++++++|+|||+.+++. |+..+++.+++++..+++..+...+...+...++++ +|+|||++|+|||||+...+
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQG-EVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 9999999999999999999996 999999999999999988766654433455678888 99999999999999999999
Q ss_pred HHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 015130 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (413)
Q Consensus 178 ~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (413)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||+||.|+||||+.+|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCC
Q 015130 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (413)
Q Consensus 258 ~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 337 (413)
++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|+|++
T Consensus 246 aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TT-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hh-hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCC-CCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 338 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+++++|||+++++++++.++|++++++||++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRT 401 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCC
Confidence 9999999999999999999999999999999999976433 799999999999999999999999999999999986
No 5
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=7.5e-90 Score=698.44 Aligned_cols=392 Identities=56% Similarity=0.953 Sum_probs=369.5
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHHHHHHHHHhH
Q 015130 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEHA 100 (413)
Q Consensus 22 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~-~W~~~~~~~R~~~L~~~a~~l~~~~ 100 (413)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++| .|+++|..+|.++|+++++.|++++
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999987667899999999999999999999999999999999999732 5999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeeccCCccceeeeeccceEEEeCCCchhHHhhHHHH
Q 015130 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (413)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 180 (413)
++|++++++|+|||+.++...|+..+++.+++++++++++.+...+...+...+++++|+|||++|+|||||+...++++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI 180 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHH
Confidence 99999999999999998754599999999999999988776654443344567899999999999999999999999999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhh
Q 015130 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (413)
Q Consensus 181 ~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (413)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+.+|+.|++.++.
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 260 (501)
T 1bxs_A 181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 260 (501)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999777899999999999999999999999999998875
Q ss_pred CCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCCC
Q 015130 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (413)
Q Consensus 261 ~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~ 340 (413)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|||.++++
T Consensus 261 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 340 (501)
T 1bxs_A 261 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGV 340 (501)
T ss_dssp TTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTC
T ss_pred ccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 341 ~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
++|||+++.++++++++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 341 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (501)
T 1bxs_A 341 SQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKS 413 (501)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred ccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCC
Confidence 9999999999999999999999999999999976434699999999999999999999999999999999986
No 6
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=5.5e-90 Score=701.30 Aligned_cols=392 Identities=43% Similarity=0.799 Sum_probs=368.7
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015130 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (413)
Q Consensus 22 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 101 (413)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||..|.|+++|..+|.++|++++++|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999998656778999999999999999999999999999999999974459999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeecc----CCccceeeeeccceEEEeCCCchhHHhhH
Q 015130 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (413)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (413)
+|++++++|+|||+.+++..|+..+++.+++++.+++++.+...+.. .+...+++++|+|||++|+|||||+...+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 99999999999999999734999999999999999887666544431 22356899999999999999999999999
Q ss_pred HHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 015130 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (413)
Q Consensus 178 ~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (413)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877899999999999999999999999999998
Q ss_pred HhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCC
Q 015130 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (413)
Q Consensus 258 ~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~ 337 (413)
++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++|++|+++|+++++++++|||++
T Consensus 277 aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~ 356 (517)
T 2o2p_A 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE 356 (517)
T ss_dssp HHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred hHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 87357899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 338 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+++++|||+++.+++++.++|++++++||++++||......|+|++||||.+++++|++++||+||||++|++|+|
T Consensus 357 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 432 (517)
T 2o2p_A 357 RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFAD 432 (517)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECT
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCC
Confidence 9999999999999999999999999999999999986534699999999999999999999999999999999986
No 7
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.1e-89 Score=700.69 Aligned_cols=391 Identities=41% Similarity=0.721 Sum_probs=373.4
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhc--ccCCCCCCCHHHHHHHHHHHHHH
Q 015130 19 IKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPRFSGAERRGIMLKFADL 95 (413)
Q Consensus 19 ~~~~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~~~~av~~A~~a~--~~~~W~~~~~~~R~~~L~~~a~~ 95 (413)
+...++||||+|+.+.++++++++||+| |+++++++.++.+|+++|+++|++|| . .|++++..+|.++|+++++.
T Consensus 20 ~~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~ 97 (528)
T 3u4j_A 20 KSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADL 97 (528)
T ss_dssp CCBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHH
Confidence 3456899999999887788999999999 99999999999999999999999999 7 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeecc-CCccceeeeeccceEEEeCCCchhHH
Q 015130 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTT 174 (413)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~ 174 (413)
|++++++|++++++|+|||..++.. |+..+++.+++++++++++.+...+.. .+...+++++|+|||++|+|||||+.
T Consensus 98 l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 176 (528)
T 3u4j_A 98 ILARQEELALIESLEVGKPIAQARG-EIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFI 176 (528)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHH
Confidence 9999999999999999999999975 999999999999999988766555433 45668899999999999999999999
Q ss_pred hhHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 015130 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (413)
Q Consensus 175 ~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (413)
..++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||+||.|+||||+.+|+.|
T Consensus 177 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 256 (528)
T 3u4j_A 177 IASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKL 256 (528)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999887899999999999999999999999999
Q ss_pred HHHHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCC
Q 015130 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (413)
Q Consensus 255 ~~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 334 (413)
++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|+
T Consensus 257 ~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 335 (528)
T 3u4j_A 257 GEIAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGD 335 (528)
T ss_dssp HHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEEC
T ss_pred HHHHH-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCC
Confidence 99999 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCC-CCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 335 p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
|+++++++||++++++++++.++|++++++||++++||....+ .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 336 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 415 (528)
T 3u4j_A 336 PLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKT 415 (528)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCC
Confidence 9999999999999999999999999999999999999986543 799999999999999999999999999999999986
No 8
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=7.7e-90 Score=697.87 Aligned_cols=390 Identities=34% Similarity=0.609 Sum_probs=371.1
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015130 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (413)
Q Consensus 18 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~ 97 (413)
.+...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||. .|+++|..+|.++|+++++.|+
T Consensus 22 ~~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 98 (498)
T 4f3x_A 22 SMMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIE 98 (498)
T ss_dssp -CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred hccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 3456789999999987666 899999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhh-hhCchHHHHHHHHHHHHHhhhhcCeeeec-cCCccceeeeeccceEEEeCCCchhHHh
Q 015130 98 EHAEVLAVLEALDAGKLHSWA-KMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTM 175 (413)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a-~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (413)
+++++|++++++|+|||+.++ + .|+..+++.+++++++++++.+...+. ..+...+++++|+|||++|+|||||+..
T Consensus 99 ~~~~ela~~~~~e~Gk~~~ea~~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 177 (498)
T 4f3x_A 99 KEADEFAALEALNCGKPINAVKN-DELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMM 177 (498)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHH-THHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HhHHHHHHHHHHHhCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHH
Confidence 999999999999999999999 6 499999999999999988765554432 2456788999999999999999999999
Q ss_pred hHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 015130 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (413)
Q Consensus 176 ~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (413)
.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|+
T Consensus 178 ~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 256 (498)
T 4f3x_A 178 MAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVL 256 (498)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999998888999999999999999999999999999
Q ss_pred HHHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCC
Q 015130 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (413)
Q Consensus 256 ~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p 335 (413)
+.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 257 ~~aa-~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 335 (498)
T 4f3x_A 257 AAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLD 335 (498)
T ss_dssp HHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCS
T ss_pred HHHH-hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCC
Confidence 9999 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHhHHHHHHHHHHHHHcCC-EEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 336 ~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+++++++|||+++.+++++.++|++++++|+ ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 336 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 414 (498)
T 4f3x_A 336 DDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTG 414 (498)
T ss_dssp SGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECT
T ss_pred ccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCC
Confidence 9999999999999999999999999999999 99999986556799999999999999999999999999999999986
No 9
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=8.1e-90 Score=698.07 Aligned_cols=387 Identities=39% Similarity=0.692 Sum_probs=370.5
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015130 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (413)
Q Consensus 21 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 100 (413)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+++|..+|.++|+++++.|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999877788999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeecc-CCccceeeeeccceEEEeCCCchhHHhhHHH
Q 015130 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (413)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (413)
++|++++++|+|||+.+++. |+..+++.+++++.+.++..+...+.. .+...+++++|+|||++|+|||||+...+++
T Consensus 110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999987 999999999999999887665544432 3466789999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 015130 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (413)
Q Consensus 180 l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (413)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred hCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCC
Q 015130 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (413)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 339 (413)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.+++
T Consensus 269 -~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 -PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp -GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred -hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 340 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+++||++++.++++++++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 419 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDT 419 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECC
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCC
Confidence 99999999999999999999999999999999976 3699999999999999999999999999999999986
No 10
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.3e-89 Score=694.46 Aligned_cols=392 Identities=39% Similarity=0.681 Sum_probs=370.2
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015130 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (413)
Q Consensus 20 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 99 (413)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||..|.|+++|..+|.++|+++++.|+++
T Consensus 7 ~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~ 86 (495)
T 3b4w_A 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAER 86 (495)
T ss_dssp ECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 33468999999987667899999999999999999999999999999999999744699999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeeccCCccceeeeeccceEEEeCCCchhHHhhHHH
Q 015130 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (413)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (413)
+++|++++++|+|||+.+++..|+..+++.+++++++++++.+...+...+...+++++|+|||++|+|||||+...+++
T Consensus 87 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 87 KDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 99999999999999999997349999999999999998887766544333346789999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 015130 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (413)
Q Consensus 180 l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (413)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.+++..|+.||+|+.|+||||+.+|+.|++.++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 245 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 8889999999999999999999999999999999
Q ss_pred hCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCC
Q 015130 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (413)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 339 (413)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|||++++
T Consensus 246 -~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 324 (495)
T 3b4w_A 246 -EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPA 324 (495)
T ss_dssp -HTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTT
T ss_pred -hcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccC--CCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 340 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+++|||+++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 325 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 400 (495)
T 3b4w_A 325 AQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDT 400 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCC
Confidence 9999999999999999999999999999999997643 2699999999999999999999999999999999986
No 11
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=5.8e-89 Score=692.84 Aligned_cols=389 Identities=38% Similarity=0.684 Sum_probs=369.6
Q ss_pred cccceeEcCeEeeCCCCCe-EEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015130 20 KFTKLFINGEFVDSVSGKT-FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (413)
Q Consensus 20 ~~~~~~I~G~~~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~ 98 (413)
...++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||. .|++++..+|.++|+++++.|++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 95 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRE 95 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 5567899999998766778 99999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeeccCCccceeeeeccceEEEeCCCchhHHhhHH
Q 015130 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (413)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (413)
++++|++++++|+|||+.++.. |+..+++.++++++++++..+...+...+...+++++|+|||++|+|||||+...++
T Consensus 96 ~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 174 (503)
T 1a4s_A 96 RRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAW 174 (503)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHH
Confidence 9999999999999999999986 999999999999999887665544433344678999999999999999999999999
Q ss_pred HHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 015130 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (413)
Q Consensus 179 ~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (413)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+ ++++.|+.||+++.|+||||+.+|+.|++.+
T Consensus 175 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 253 (503)
T 1a4s_A 175 KCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253 (503)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999977 8999999999999999999999999999999
Q ss_pred hhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCC
Q 015130 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (413)
Q Consensus 259 ~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~ 338 (413)
+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|||+++
T Consensus 254 a-~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 332 (503)
T 1a4s_A 254 A-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332 (503)
T ss_dssp H-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred h-hcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCccc
Confidence 9 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCccc--C----CCCCeEeeEEEEeCCCCCcccccccccceeEEEEec
Q 015130 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--G----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (413)
Q Consensus 339 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~----~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 412 (413)
++++|||+++.++++++++|++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 333 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (503)
T 1a4s_A 333 ETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412 (503)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecC
Confidence 9999999999999999999999999999999999764 2 358999999999999999999999999999999998
Q ss_pred C
Q 015130 413 K 413 (413)
Q Consensus 413 ~ 413 (413)
|
T Consensus 413 ~ 413 (503)
T 1a4s_A 413 T 413 (503)
T ss_dssp C
T ss_pred C
Confidence 6
No 12
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=4.1e-89 Score=694.47 Aligned_cols=392 Identities=44% Similarity=0.751 Sum_probs=370.6
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccC---CCCCCCHHHHHHHHHHHHHHH
Q 015130 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG---PWPRFSGAERRGIMLKFADLI 96 (413)
Q Consensus 20 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~---~W~~~~~~~R~~~L~~~a~~l 96 (413)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||.++ .|+++|..+|.++|+++++.|
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l 85 (503)
T 3iwj_A 6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKV 85 (503)
T ss_dssp CCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHH
T ss_pred CCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHH
Confidence 45679999999988788899999999999999999999999999999999999732 699999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCee-ee--c-cCCccceeeeeccceEEEeCCCchh
Q 015130 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LK--M-SRALQGYTLREPIGVVGHIIPWNFP 172 (413)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~-~~--~-~~~~~~~~~~~P~Gvv~~i~p~n~P 172 (413)
++++++|++++++|+|||+.+++. |+..+++.+++++.+++++.+.. .+ . ..+...+++++|+|||++|+|||||
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T 3iwj_A 86 TEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYP 164 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchH
Confidence 999999999999999999999986 99999999999999887654432 11 1 1345678999999999999999999
Q ss_pred HHhhHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHH
Q 015130 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252 (413)
Q Consensus 173 ~~~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~ 252 (413)
+.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+++.|+||||+.+|+
T Consensus 165 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~ 244 (503)
T 3iwj_A 165 MLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGS 244 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccC
Q 015130 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (413)
Q Consensus 253 ~i~~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~ 332 (413)
.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++
T Consensus 245 ~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (503)
T 3iwj_A 245 KIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKI 323 (503)
T ss_dssp HHHHHHG-GGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHh-cCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccC
Confidence 9999998 889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccC--CCCCeEeeEEEEeCCCCCcccccccccceeEEEE
Q 015130 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410 (413)
Q Consensus 333 g~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~ 410 (413)
|||+++++++|||+++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 403 (503)
T 3iwj_A 324 SDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKT 403 (503)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEE
Confidence 99999999999999999999999999999999999999998653 4799999999999999999999999999999999
Q ss_pred ecC
Q 015130 411 FKK 413 (413)
Q Consensus 411 ~~~ 413 (413)
|+|
T Consensus 404 ~~~ 406 (503)
T 3iwj_A 404 FST 406 (503)
T ss_dssp ESS
T ss_pred eCC
Confidence 986
No 13
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=1.9e-89 Score=695.91 Aligned_cols=392 Identities=35% Similarity=0.631 Sum_probs=371.5
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015130 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (413)
Q Consensus 18 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~ 97 (413)
+....++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+++|..+|.++|+++++.|+
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 86 (497)
T 3k2w_A 9 HFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIR 86 (497)
T ss_dssp CCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHH
T ss_pred cccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 45667899999999887788999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeec-cCCccceeeeeccceEEEeCCCchhHHhh
Q 015130 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (413)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (413)
+++++|++++++|+|||..+++. |+..+++.+++++..+++..+...+. ..+...+++++|+|||++|+|||||+...
T Consensus 87 ~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 165 (497)
T 3k2w_A 87 ENKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALA 165 (497)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHH
Confidence 99999999999999999999986 99999999999999988776655443 24566789999999999999999999999
Q ss_pred HHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHH
Q 015130 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (413)
Q Consensus 177 ~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (413)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+||.|+||||+.+|+.|++
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~ 245 (497)
T 3k2w_A 166 GRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYK 245 (497)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988789999999999999999999999999999
Q ss_pred HHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCC
Q 015130 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (413)
Q Consensus 257 ~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~ 336 (413)
.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|+|+
T Consensus 246 ~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~ 324 (497)
T 3k2w_A 246 TSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPM 324 (497)
T ss_dssp HHT-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred Hhh-hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 999 8899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcc--cCC--CCCeEeeEEEEeCCCCCcccccccccceeEEEEec
Q 015130 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP--IGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (413)
Q Consensus 337 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--~~~--~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 412 (413)
++++++||++++++++++.++|++++++||++++||.. .+. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 325 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 404 (497)
T 3k2w_A 325 DADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVS 404 (497)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeC
Confidence 99999999999999999999999999999999999973 222 69999999999999999999999999999999998
Q ss_pred C
Q 015130 413 K 413 (413)
Q Consensus 413 ~ 413 (413)
|
T Consensus 405 ~ 405 (497)
T 3k2w_A 405 S 405 (497)
T ss_dssp C
T ss_pred C
Confidence 6
No 14
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=5.9e-89 Score=691.25 Aligned_cols=392 Identities=36% Similarity=0.597 Sum_probs=367.4
Q ss_pred CcccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHH
Q 015130 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (413)
Q Consensus 17 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l 96 (413)
.++...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+++|..+|.++|+++++.|
T Consensus 21 ~m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l 98 (497)
T 3i44_A 21 SMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEIY 98 (497)
T ss_dssp -CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHH
T ss_pred ccccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHH
Confidence 344567899999999887788999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeeccCCccceee-eeccceEEEeCCCchhHHh
Q 015130 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL-REPIGVVGHIIPWNFPTTM 175 (413)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~P~~~ 175 (413)
++++++|++++++|+|||+.+++..|+..+++.+++++............ ..+...+++ ++|+|||++|+|||||+..
T Consensus 99 ~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 177 (497)
T 3i44_A 99 EKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLITPWNWPMNQ 177 (497)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEECCCcchHHH
Confidence 99999999999999999999998349999999999999877654322211 124457788 9999999999999999999
Q ss_pred hHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 015130 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (413)
Q Consensus 176 ~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (413)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|+
T Consensus 178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~ 257 (497)
T 3i44_A 178 VTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDIS 257 (497)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCC
Q 015130 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (413)
Q Consensus 256 ~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p 335 (413)
+.++ +++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 258 ~~aa-~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 335 (497)
T 3i44_A 258 KNAS-NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPG 335 (497)
T ss_dssp HHHH-TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred HHHh-hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999 89999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCc-ccC--CCCCeEeeEEEEeCCCCCcccccccccceeEEEEec
Q 015130 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (413)
Q Consensus 336 ~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~-~~~--~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 412 (413)
+++++++|||+++.++++++++|++++++||++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 336 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 415 (497)
T 3i44_A 336 HQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFN 415 (497)
T ss_dssp TSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecC
Confidence 99999999999999999999999999999999999994 322 269999999999999999999999999999999998
Q ss_pred C
Q 015130 413 K 413 (413)
Q Consensus 413 ~ 413 (413)
|
T Consensus 416 ~ 416 (497)
T 3i44_A 416 T 416 (497)
T ss_dssp S
T ss_pred C
Confidence 6
No 15
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=9.6e-89 Score=690.17 Aligned_cols=392 Identities=55% Similarity=0.894 Sum_probs=369.0
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHHHHHHHHHhH
Q 015130 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEHA 100 (413)
Q Consensus 22 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~-~W~~~~~~~R~~~L~~~a~~l~~~~ 100 (413)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||.++ .|+++|..+|.++|+++++.|++++
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999987667899999999999999999999999999999999999621 4999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeeccCCccceeeeeccceEEEeCCCchhHHhhHHHH
Q 015130 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (413)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 180 (413)
++|++++++|+|||+.++...|+..+++.+++++++++++.+...+...+...+++++|+|||++|+|||||+...++++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 99999999999999998754599999999999999888776654443334557899999999999999999999999999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhh
Q 015130 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (413)
Q Consensus 181 ~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (413)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.+++..|+.||+|+.|+||||+.+|+.|++.++.
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 259 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999777899999999999999999999999999998875
Q ss_pred CCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCCC
Q 015130 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (413)
Q Consensus 261 ~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~ 340 (413)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|||.++++
T Consensus 260 ~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp TTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred hcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 341 ~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
++|||+++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 412 (500)
T 1o04_A 340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKT 412 (500)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCC
Confidence 9999999999999999999999999999999976434699999999999999999999999999999999986
No 16
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.6e-89 Score=693.55 Aligned_cols=390 Identities=32% Similarity=0.464 Sum_probs=369.4
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015130 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (413)
Q Consensus 19 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~ 98 (413)
|...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|++++..+|.++|+++++.|++
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 101 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLND 101 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4667899999999887788999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeec-cCCccceeeeeccceEEEeCCCchhHHhhH
Q 015130 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (413)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (413)
++++|++++++|+|||..+++. |+..+++.+++++.+.+...+...+. ..+...+++++|+|||++|+|||||+...+
T Consensus 102 ~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 180 (521)
T 4e4g_A 102 NMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPM 180 (521)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHH
Confidence 9999999999999999999986 99999999999998777665544332 245568899999999999999999999999
Q ss_pred HHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 015130 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (413)
Q Consensus 178 ~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (413)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ .+.+..|+.||+||.|+||||+.+|+.|++.
T Consensus 181 ~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~ 259 (521)
T 4e4g_A 181 WMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGT 259 (521)
T ss_dssp HHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999995 4677999999999999999999999999999
Q ss_pred HhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecc-hHHHHHHHHHHHHHcccCCCCC
Q 015130 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPF 336 (413)
Q Consensus 258 ~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~L~~~~~~~~~g~p~ 336 (413)
++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ ++++|+++|+++++++++|+|.
T Consensus 260 aa-~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~ 338 (521)
T 4e4g_A 260 AA-MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYT 338 (521)
T ss_dssp HH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTT
T ss_pred Hh-hcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCC
Confidence 99 789999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCccc----CCCCCeEeeEEEEeCCCCCcccccccccceeEEEEec
Q 015130 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (413)
Q Consensus 337 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 412 (413)
++++++||++++.+++++.++|++++++||++++||... ...|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 418 (521)
T 4e4g_A 339 DEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRAR 418 (521)
T ss_dssp CTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBS
T ss_pred CccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeC
Confidence 999999999999999999999999999999999999752 2469999999999999999999999999999999998
Q ss_pred C
Q 015130 413 K 413 (413)
Q Consensus 413 ~ 413 (413)
|
T Consensus 419 ~ 419 (521)
T 4e4g_A 419 N 419 (521)
T ss_dssp S
T ss_pred C
Confidence 6
No 17
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=8.2e-89 Score=692.68 Aligned_cols=388 Identities=39% Similarity=0.681 Sum_probs=369.0
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015130 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (413)
Q Consensus 18 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~ 97 (413)
++...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+++|..+|.++|+++++.|+
T Consensus 11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 88 (517)
T 3r31_A 11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMR 88 (517)
T ss_dssp TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHH
Confidence 34567899999999887888999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhh----hcCeeeeccCCccceeeeeccceEEEeCCCchhH
Q 015130 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK----IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPT 173 (413)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (413)
+++++|++++++|+|||..++ |+..+++.+++++.+++. ..+...+...+. .+++++|+|||++|+|||||+
T Consensus 89 ~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~ 164 (517)
T 3r31_A 89 ERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQ 164 (517)
T ss_dssp HTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchH
Confidence 999999999999999999998 899999999999999877 666655543445 899999999999999999999
Q ss_pred HhhHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHH
Q 015130 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (413)
Q Consensus 174 ~~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (413)
...++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|+.||+||.|+||||+.+|+.
T Consensus 165 ~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 243 (517)
T 3r31_A 165 QIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRK 243 (517)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 7789999999999999999999999999
Q ss_pred HHHHHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCC
Q 015130 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (413)
Q Consensus 254 i~~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g 333 (413)
|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|
T Consensus 244 i~~~aa-~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 322 (517)
T 3r31_A 244 VAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG 322 (517)
T ss_dssp HHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHhh-cCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 999999 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccC---CCCCeEeeEEEEeCCCCCcccccccccceeEEEE
Q 015130 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410 (413)
Q Consensus 334 ~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~ 410 (413)
||+++++++|||+++++++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 323 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (517)
T 3r31_A 323 DPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLD 402 (517)
T ss_dssp CTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEE
T ss_pred CCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEE
Confidence 9999999999999999999999999999999999999993121 3699999999999999999999999999999999
Q ss_pred ecC
Q 015130 411 FKK 413 (413)
Q Consensus 411 ~~~ 413 (413)
|+|
T Consensus 403 ~~~ 405 (517)
T 3r31_A 403 FDD 405 (517)
T ss_dssp ECC
T ss_pred eCC
Confidence 986
No 18
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=2.4e-88 Score=686.00 Aligned_cols=389 Identities=33% Similarity=0.607 Sum_probs=369.1
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015130 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (413)
Q Consensus 21 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 100 (413)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|++++
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (479)
T 2imp_A 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRERA 83 (479)
T ss_dssp ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999876678899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeecc-CCccceeeeeccceEEEeCCCchhHHhhHHH
Q 015130 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (413)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (413)
++|++++++|+|||+.+++. |+..+++.++++++++++..+...+.. .+...+++++|+|||++|+|||||+...+++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 84 SEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 99999999999999999986 999999999999998877666554322 3446789999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 015130 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (413)
Q Consensus 180 l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (413)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+++.|+||||+.+|+.|++.++
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa 242 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA 242 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999977778999999999999999999999999999999
Q ss_pred hCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCC-C
Q 015130 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD-P 338 (413)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~-~ 338 (413)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|.++++++++|+|++ +
T Consensus 243 -~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 321 (479)
T 2imp_A 243 -KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321 (479)
T ss_dssp -TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCS
T ss_pred -ccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 339 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
++++|||+++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 322 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~ 396 (479)
T 2imp_A 322 DIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDT 396 (479)
T ss_dssp SCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESS
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCC
Confidence 999999999999999999999999999999999976334699999999999999999999999999999999986
No 19
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=2.2e-88 Score=686.55 Aligned_cols=390 Identities=37% Similarity=0.669 Sum_probs=371.5
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015130 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (413)
Q Consensus 20 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 99 (413)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+++|.++|.++|+++++.|+++
T Consensus 8 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 85 (481)
T 3jz4_A 8 FRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEH 85 (481)
T ss_dssp CCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 345689999999887888999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeec-cCCccceeeeeccceEEEeCCCchhHHhhHH
Q 015130 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (413)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (413)
+++|++++++|+|||..+++. |+..+++.+++++....+..+...+. ..+...+++++|+|||++|+|||||++..++
T Consensus 86 ~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 164 (481)
T 3jz4_A 86 QDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITR 164 (481)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHH
Confidence 999999999999999999987 99999999999999887665554442 2455678999999999999999999999999
Q ss_pred HHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 015130 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (413)
Q Consensus 179 ~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (413)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.+
T Consensus 165 ~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~a 244 (481)
T 3jz4_A 165 KAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQC 244 (481)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred hhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCC
Q 015130 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (413)
Q Consensus 259 ~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~ 338 (413)
+ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|+|.++
T Consensus 245 a-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 323 (481)
T 3jz4_A 245 A-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDN 323 (481)
T ss_dssp T-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTST
T ss_pred h-hcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccC
Confidence 9 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 339 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
++++||++++.++++++++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 324 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 398 (481)
T 3jz4_A 324 GVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKD 398 (481)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECC
T ss_pred cCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECC
Confidence 999999999999999999999999999999999986445689999999999999999999999999999999986
No 20
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.9e-88 Score=687.14 Aligned_cols=394 Identities=36% Similarity=0.614 Sum_probs=367.4
Q ss_pred cCCCcccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHH
Q 015130 14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFA 93 (413)
Q Consensus 14 ~~~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a 93 (413)
.|...+...++||||+|+.+.+ ++++++||+||+++++++.++.+|+++|+++|++||. .|+++|..+|.++|++++
T Consensus 16 ~~~~~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a 92 (495)
T 1wnd_A 16 YKKAGLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLA 92 (495)
T ss_dssp ------CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHH
T ss_pred cccccccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHH
Confidence 3444455567999999998655 7899999999999999999999999999999999999 899999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeecc-CCccceeeeeccceEEEeCCCchh
Q 015130 94 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFP 172 (413)
Q Consensus 94 ~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P 172 (413)
+.|++++++|++++++|+|||+.++...|+..+++.++++++++++..+...+.. .+...+++++|+|||++|+|||||
T Consensus 93 ~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P 172 (495)
T 1wnd_A 93 DVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYP 172 (495)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcch
Confidence 9999999999999999999999999755999999999999998877655543322 344568899999999999999999
Q ss_pred HHhhHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHH
Q 015130 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252 (413)
Q Consensus 173 ~~~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~ 252 (413)
+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+|.+.+++..|++||+||.|+||||+.+|+
T Consensus 173 ~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~ 251 (495)
T 1wnd_A 173 LMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGE 251 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHH
Confidence 9999999999999999999999999999999999999999 999999999997778999999999999999999999999
Q ss_pred HHHHHHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccC
Q 015130 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (413)
Q Consensus 253 ~i~~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~ 332 (413)
.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++
T Consensus 252 ~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 330 (495)
T 1wnd_A 252 HIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKS 330 (495)
T ss_dssp HHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHH-hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccC
Confidence 9999999 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHhHHHHHHHHHHHHHcC-CEEEeCCc-ccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEE
Q 015130 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGK-PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410 (413)
Q Consensus 333 g~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~ 410 (413)
|||.++++++|||+++.+++++.++|++++++| +++++||. .. +.|+|++|||+.+++++|++++||+||||++|++
T Consensus 331 g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 409 (495)
T 1wnd_A 331 GAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTP 409 (495)
T ss_dssp CCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEE
Confidence 999999999999999999999999999999999 99999997 53 3699999999999999999999999999999999
Q ss_pred ecC
Q 015130 411 FKK 413 (413)
Q Consensus 411 ~~~ 413 (413)
|+|
T Consensus 410 ~~~ 412 (495)
T 1wnd_A 410 FDN 412 (495)
T ss_dssp ECC
T ss_pred eCC
Confidence 986
No 21
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.6e-88 Score=689.87 Aligned_cols=387 Identities=43% Similarity=0.726 Sum_probs=368.3
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015130 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (413)
Q Consensus 22 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 101 (413)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|+++++
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 104 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD 104 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999876778999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeec-cCCccceeeeeccceEEEeCCCchhHHhhHHHH
Q 015130 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (413)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 180 (413)
+|++++++|+|||+.+++. |+..+++.++++++++++..+...+. ..+...+++++|+|||++|+|||||+...++++
T Consensus 105 ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 183 (515)
T 2d4e_A 105 ELAVMECLDAGQVLRIVRA-QVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI 183 (515)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence 9999999999999999985 99999999999999888776665443 234567889999999999999999999999999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhh
Q 015130 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (413)
Q Consensus 181 ~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (413)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+++.|+||||+.+|+.|++.++
T Consensus 184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa- 262 (515)
T 2d4e_A 184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA- 262 (515)
T ss_dssp HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG-
T ss_pred hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999977789999999999999999999999999999999
Q ss_pred CCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCCC
Q 015130 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (413)
Q Consensus 261 ~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~ 340 (413)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|+|.++++
T Consensus 263 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 342 (515)
T 2d4e_A 263 DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET 342 (515)
T ss_dssp GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccC--------CCCCeEeeEEEEeCCCCCcccccccccceeEEEEec
Q 015130 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (413)
Q Consensus 341 ~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--------~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 412 (413)
++|||+++.+++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+
T Consensus 343 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~ 421 (515)
T 2d4e_A 343 EVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFK 421 (515)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeC
Confidence 999999999999999999999999999999997642 2699999999999 9999999999999999999998
Q ss_pred C
Q 015130 413 K 413 (413)
Q Consensus 413 ~ 413 (413)
|
T Consensus 422 ~ 422 (515)
T 2d4e_A 422 D 422 (515)
T ss_dssp S
T ss_pred C
Confidence 6
No 22
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.8e-88 Score=687.69 Aligned_cols=395 Identities=42% Similarity=0.733 Sum_probs=375.5
Q ss_pred CCcccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 015130 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (413)
Q Consensus 16 ~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~ 95 (413)
|.+++..++||||+|+.+.++++++++||+||+++++++.++.+++++++++|++||. .|+.++..+|.++|+++++.
T Consensus 1 ~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~ 78 (490)
T 2ve5_A 1 MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDI 78 (490)
T ss_dssp -CCSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHH
T ss_pred CCccccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence 3556678899999999887788999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeeccCCccceeeeeccceEEEeCCCchhHHh
Q 015130 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTM 175 (413)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (413)
|++++++|++++++|+|||..+++..|+..+++.+++++++++...+...+...+...+++++|+|||++|+|||||+..
T Consensus 79 l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~ 158 (490)
T 2ve5_A 79 LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQI 158 (490)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHH
Confidence 99999999999999999999999855999999999999999887766555544566788999999999999999999999
Q ss_pred hHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 015130 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (413)
Q Consensus 176 ~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (413)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||++|.|+||||+.+|+.|+
T Consensus 159 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~ 238 (490)
T 2ve5_A 159 ALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238 (490)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred HHH-hhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCC
Q 015130 256 QAA-ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (413)
Q Consensus 256 ~~~-~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 334 (413)
+.+ + +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|+
T Consensus 239 ~~a~a-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 317 (490)
T 2ve5_A 239 ASASS-SSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGD 317 (490)
T ss_dssp HHHHH-HHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred Hhchh-ccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 999 7 78999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEEeCCCCCcccccccccceeEEEE
Q 015130 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410 (413)
Q Consensus 335 p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~ 410 (413)
|.++++++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 318 p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~ 397 (490)
T 2ve5_A 318 PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 397 (490)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEE
Confidence 999999999999999999999999999999999999997632 3689999999999999999999999999999999
Q ss_pred ecC
Q 015130 411 FKK 413 (413)
Q Consensus 411 ~~~ 413 (413)
|+|
T Consensus 398 ~~~ 400 (490)
T 2ve5_A 398 YDD 400 (490)
T ss_dssp ESC
T ss_pred eCC
Confidence 986
No 23
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=3.5e-88 Score=691.15 Aligned_cols=386 Identities=33% Similarity=0.571 Sum_probs=368.0
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015130 21 FTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (413)
Q Consensus 21 ~~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 99 (413)
.+++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||. .|++++..+|.++|+++++.|+++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR 112 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 467999999997 668999999999 999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHH-hhhhcCeeeeccCCccceeeeeccceEEEeCCCchhHHhhHH
Q 015130 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA-ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (413)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (413)
+++|++++++|+|||+.+++. |+..+++.+++++++ .+...+...+...+...+++++|+|||++|+|||||+.+.++
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 113 KHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 999999999999999999997 999999999999998 455555554433456788999999999999999999999999
Q ss_pred HHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 015130 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (413)
Q Consensus 179 ~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (413)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.+
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 271 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998878999999999999999999999999999999
Q ss_pred hhCC------CcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccC
Q 015130 259 ATSN------LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (413)
Q Consensus 259 ~~~~------~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~ 332 (413)
+ ++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++
T Consensus 272 a-~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 272 A-VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp T-SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred h-hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 8 67 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEec
Q 015130 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (413)
Q Consensus 333 g~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 412 (413)
|||.++++++||++++.+++++.++|++++++| ++++||..+...|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 429 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429 (538)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999998754479999999999999999999999999999999998
Q ss_pred C
Q 015130 413 K 413 (413)
Q Consensus 413 ~ 413 (413)
|
T Consensus 430 ~ 430 (538)
T 3qan_A 430 D 430 (538)
T ss_dssp S
T ss_pred C
Confidence 6
No 24
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=5.5e-88 Score=685.38 Aligned_cols=383 Identities=33% Similarity=0.542 Sum_probs=365.8
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015130 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (413)
Q Consensus 21 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 100 (413)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+.+|..+|.++|+++++.|++++
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (505)
T 3prl_A 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERK 88 (505)
T ss_dssp ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999887788999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeecc--C----CccceeeeeccceEEEeCCCchhHH
Q 015130 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--R----ALQGYTLREPIGVVGHIIPWNFPTT 174 (413)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gvv~~i~p~n~P~~ 174 (413)
++|++++++|+|||..+++. |+..+++.++++++.+++..+...+.. . +...+++++|+|||++|+|||||++
T Consensus 89 ~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 167 (505)
T 3prl_A 89 EIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVN 167 (505)
T ss_dssp HHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHH
Confidence 99999999999999999997 999999999999999887766544432 2 3457889999999999999999999
Q ss_pred hhHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 015130 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (413)
Q Consensus 175 ~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (413)
..++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||++|.|+||||+.+|+.|
T Consensus 168 ~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 247 (505)
T 3prl_A 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI 247 (505)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCC
Q 015130 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (413)
Q Consensus 255 ~~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 334 (413)
++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||
T Consensus 248 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 324 (505)
T 3prl_A 248 SEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS 324 (505)
T ss_dssp HHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence 99876 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 335 p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
|+ +++++||++++.+++++.++|++++++||++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 325 p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~ 399 (505)
T 3prl_A 325 PE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKD 399 (505)
T ss_dssp TT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCC
Confidence 99 9999999999999999999999999999999999974 589999999999999999999999999999999986
No 25
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=2.6e-87 Score=680.73 Aligned_cols=399 Identities=29% Similarity=0.477 Sum_probs=372.7
Q ss_pred cccccccCCCccc-ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHH
Q 015130 8 GSCKSLFKMPEIK-FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERR 86 (413)
Q Consensus 8 ~~~~~~~~~~~~~-~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~ 86 (413)
.....||+..+++ ..+.||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||. .|++++..+|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~ 84 (500)
T 2j6l_A 9 QPQYAWLKELGLREENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRG 84 (500)
T ss_dssp SGGGGGGGGGTCCSEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHH
T ss_pred cchhHHHHhcCCCCCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHH
Confidence 5566688888775 478999999994 567899999999999999999999999999999999999 89999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeecc-CCccceeeeeccceEEE
Q 015130 87 GIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGH 165 (413)
Q Consensus 87 ~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~ 165 (413)
++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++.+++++.+...+.. .+...+++++|+|||++
T Consensus 85 ~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~ 163 (500)
T 2j6l_A 85 EIVRQIGDALREKIQVLGSLVSLEMGKILVEGVG-EVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGI 163 (500)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEE
Confidence 9999999999999999999999999999999975 999999999999988877655544322 23345788999999999
Q ss_pred eCCCchhHHhhHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHHHcCCCCCE
Q 015130 166 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241 (413)
Q Consensus 166 i~p~n~P~~~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~----~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~ 241 (413)
|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+| +.++++.|+.||++|+
T Consensus 164 I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~ 242 (500)
T 2j6l_A 164 ITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNL 242 (500)
T ss_dssp ECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSE
T ss_pred ECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCE
Confidence 999999999999999999999999999999999999999988876 56999999999999 7789999999999999
Q ss_pred EEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHH
Q 015130 242 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321 (413)
Q Consensus 242 v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~ 321 (413)
|+||||+.+|+.|++.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|++
T Consensus 243 I~FTGS~~~g~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~ 321 (500)
T 2j6l_A 243 LSFTGSTQVGKQVGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVN 321 (500)
T ss_dssp EEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHH
T ss_pred EEEECCHHHHHHHHHHhc-cCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHH
Confidence 999999999999999999 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcccCCCCCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCccccccc
Q 015130 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEI 401 (413)
Q Consensus 322 ~L~~~~~~~~~g~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~ 401 (413)
+|+++++++++|||.++++++|||+++.++++++++|++++++|+++++||...+..|+|++|||+.+++++|++++||+
T Consensus 322 ~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 401 (500)
T 2j6l_A 322 RLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTET 401 (500)
T ss_dssp HHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCC
T ss_pred HHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcc
Confidence 99999999999999999999999999999999999999999999999999976434699999999999999999999999
Q ss_pred ccceeEEEEecC
Q 015130 402 FGPVMALMKFKK 413 (413)
Q Consensus 402 fgPvl~v~~~~~ 413 (413)
||||++|++|+|
T Consensus 402 FGPVl~v~~~~~ 413 (500)
T 2j6l_A 402 FAPILYVFKFQN 413 (500)
T ss_dssp SSSEEEEEEECC
T ss_pred cCceEEEEeeCC
Confidence 999999999986
No 26
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=2.4e-87 Score=678.98 Aligned_cols=385 Identities=37% Similarity=0.646 Sum_probs=366.5
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015130 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (413)
Q Consensus 22 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 101 (413)
.++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|+++++
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999754 7899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeec-cCCccceeeeeccceEEEeCCCchhHHhhHHHH
Q 015130 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (413)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 180 (413)
+|++++++|+|||..+++. |+..+++.++++++++++..+...+. ..+...+++++|+|||++|+|||||++..++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 9999999999999999986 99999999999999988766655443 234567899999999999999999999999999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 015130 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP---GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (413)
Q Consensus 181 ~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~---g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (413)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+ |.+.++++.|++||+++.|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 8667889999999999999999999999999999
Q ss_pred HhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHc-ccCCCCC
Q 015130 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPF 336 (413)
Q Consensus 258 ~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~-~~~g~p~ 336 (413)
++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|++++++ +++|||.
T Consensus 248 aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HH-TTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hh-ccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 99 899999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCC-eEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY-YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 337 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~-~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
++++++|||+++.+++++.++|++++++|+++++||..+ ..|+ |++|||+.+++++|++++||+||||++|++|+|
T Consensus 327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 403 (487)
T 2w8n_A 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDT 403 (487)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESC
T ss_pred cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCC
Confidence 999999999999999999999999999999999999764 3689 999999999999999999999999999999986
No 27
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=4.8e-87 Score=677.86 Aligned_cols=387 Identities=28% Similarity=0.489 Sum_probs=366.4
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015130 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (413)
Q Consensus 20 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 99 (413)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|+++++.|+++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHEN 82 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHH
Confidence 456799999999877788999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeec--cCCccceeeeeccceEEEeCCCchhHHhhH
Q 015130 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (413)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (413)
+++|++++++|+|||+.+++. |+..+++.+++++...+...+...+. ..+...+++++|+|||++|+|||||+...+
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (485)
T 4dng_A 83 RDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSM 161 (485)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHH
Confidence 999999999999999999997 99999999999999988766655442 234667899999999999999999999999
Q ss_pred HHHhhHhhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHH
Q 015130 178 MKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (413)
Q Consensus 178 ~~l~~AL~aGN~Vilkps~~~~~~~-~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (413)
+++++||++||+||+|||+.+|+++ .+|.+++.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.|++
T Consensus 162 ~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~ 241 (485)
T 4dng_A 162 RSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241 (485)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999987779999999999999999999999999999
Q ss_pred HHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCC
Q 015130 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (413)
Q Consensus 257 ~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~ 336 (413)
.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|+|.
T Consensus 242 ~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~ 320 (485)
T 4dng_A 242 IAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQT 320 (485)
T ss_dssp HHH-HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred HHh-hhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 998 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 337 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
++++++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 321 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~ 394 (485)
T 4dng_A 321 DPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGS 394 (485)
T ss_dssp STTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESS
T ss_pred cCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCC
Confidence 99999999999999999999999999999999999975 689999999999999999999999999999999986
No 28
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.8e-87 Score=679.48 Aligned_cols=388 Identities=36% Similarity=0.589 Sum_probs=370.3
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015130 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (413)
Q Consensus 18 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~ 97 (413)
.++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|++++..+|.++|+++++.|+
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 86 (508)
T 3r64_A 9 GIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELLE 86 (508)
T ss_dssp TBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred CccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHH
Confidence 34567899999999877788999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeec--cCCccceeeeeccceEEEeCCCchhHHh
Q 015130 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTM 175 (413)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (413)
+++++|++++++|+|||..+++. |+..+++.+++++.+.+...+ ..+. .++...+++++|+|||++|+|||||+..
T Consensus 87 ~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 164 (508)
T 3r64_A 87 EHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNL 164 (508)
T ss_dssp HTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHH
Confidence 99999999999999999999997 999999999999988876555 4432 2346788999999999999999999999
Q ss_pred hHHHHhhHhhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 015130 176 FFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (413)
Q Consensus 176 ~~~~l~~AL~aGN~Vilkps~~~~~~~-~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (413)
.++++++||++||+||+|||+.+|+++ .+|++++.++|+|+|++|+|+|++.++++.|+.||++|.|+||||+.+|+.|
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i 244 (508)
T 3r64_A 165 SIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244 (508)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999777899999999999999999999999999
Q ss_pred HHHHhhC--CCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccC
Q 015130 255 MQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (413)
Q Consensus 255 ~~~~~~~--~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~ 332 (413)
++.++ + +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++
T Consensus 245 ~~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (508)
T 3r64_A 245 GELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323 (508)
T ss_dssp HHHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HHHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99998 7 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEec
Q 015130 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (413)
Q Consensus 333 g~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 412 (413)
|+|.++++++|||+++.++++++++|++++++|+++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 324 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (508)
T 3r64_A 324 GDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400 (508)
T ss_dssp SCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeC
Confidence 999999999999999999999999999999999999999975 68999999999999999999999999999999998
Q ss_pred C
Q 015130 413 K 413 (413)
Q Consensus 413 ~ 413 (413)
|
T Consensus 401 ~ 401 (508)
T 3r64_A 401 D 401 (508)
T ss_dssp S
T ss_pred C
Confidence 6
No 29
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=8.6e-87 Score=673.66 Aligned_cols=376 Identities=31% Similarity=0.552 Sum_probs=353.4
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 015130 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (413)
Q Consensus 24 ~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (413)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++|+++|++||. .|+++|..+|.++|+++++.|++++++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999974 45 99999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeeccCCccceeeeeccceEEEeCCCchhHHhhHHHHhhH
Q 015130 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (413)
Q Consensus 104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 183 (413)
++++++|+|||..+++. |+..+++.+++++.+++++.+...+.. +...+++++|+|||++|+|||||+...++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999986 999999999999999887765554432 5678899999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 015130 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (413)
Q Consensus 184 L~aGN~Vilkps~~~~~~~~~l~~~l~~a----glP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (413)
|++||+||+|||+.+|+++.+|++++.++ |+|+|++|+|+|++.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988788999999999999999999999999999876
Q ss_pred hCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCC
Q 015130 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (413)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 339 (413)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|+|++++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 340 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+++|||+++.+++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~ 381 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE 381 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH
Confidence 99999999999999999999999999999999975 5899999999 9999999999999999999999985
No 30
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.3e-86 Score=673.90 Aligned_cols=387 Identities=34% Similarity=0.554 Sum_probs=365.0
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015130 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (413)
Q Consensus 21 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 100 (413)
.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|++++
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHK 82 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 46789999999876778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeee-ccCCccceeeeeccceEEEeCCCchhHHhhHHH
Q 015130 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (413)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (413)
++|++++++|+|||+.+++. |+..+++.+++++.+.+...+...+ ...+...+++++|+|||++|+|||||+...+++
T Consensus 83 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 83 EELAHLITIENGKNTKEALG-EVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 99999999999999999986 9999999999998776665555433 223456788999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 015130 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (413)
Q Consensus 180 l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (413)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.+++..|++||+++.|+||||+.+|+.|++.++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa 240 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 5578999999999999999999999999999998
Q ss_pred hCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCce-eEEecchHHHHHHHHHHHHHcccCCCCCCC
Q 015130 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR-VYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (413)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~-v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~ 338 (413)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +++|+++|+++++++++|+|+++
T Consensus 241 -~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~ 318 (486)
T 1t90_A 241 -ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDD 318 (486)
T ss_dssp -HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTST
T ss_pred -ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCcc
Confidence 789999999999999999999999999999999999999999999999 999999 99999999999999999999999
Q ss_pred CCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccC-CCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 339 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
++++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~ 394 (486)
T 1t90_A 319 GVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKN 394 (486)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCC
Confidence 99999999999999999999999999999999997432 3689999999999999999999999999999999986
No 31
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=1.7e-86 Score=671.74 Aligned_cols=382 Identities=31% Similarity=0.502 Sum_probs=362.0
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015130 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (413)
Q Consensus 20 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 99 (413)
+.+++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|+++
T Consensus 3 ~~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 78 (475)
T 1euh_A 3 KQYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD 78 (475)
T ss_dssp CBCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHh
Confidence 4568999999997543 899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeecc-CC----ccc-eeeeeccceEEEeCCCchhH
Q 015130 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RA----LQG-YTLREPIGVVGHIIPWNFPT 173 (413)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gvv~~i~p~n~P~ 173 (413)
+++|++++++|+|||+.+++. |+..+++.+++++.++++..+...+.. .+ ... +++++|+|||++|+|||||+
T Consensus 79 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 157 (475)
T 1euh_A 79 KEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 157 (475)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchH
Confidence 999999999999999999986 999999999999998877655544422 23 345 89999999999999999999
Q ss_pred HhhHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHH
Q 015130 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (413)
Q Consensus 174 ~~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (413)
...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+++.|+||||+.+|+.
T Consensus 158 ~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~ 237 (475)
T 1euh_A 158 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237 (475)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHH
Confidence 99999999999999999999999999999999999999999999999999977778999999999999999999999999
Q ss_pred HHHHHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCC
Q 015130 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (413)
Q Consensus 254 i~~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g 333 (413)
|++.++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|
T Consensus 238 i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 314 (475)
T 1euh_A 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 314 (475)
T ss_dssp HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred HHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence 999876 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 334 ~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
||.+ ++++|||+++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 315 ~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~ 390 (475)
T 1euh_A 315 NPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTS 390 (475)
T ss_dssp CGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESC
T ss_pred Cccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCC
Confidence 9999 999999999999999999999999999999999975 589999999999999999999999999999999986
No 32
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=2.1e-86 Score=676.56 Aligned_cols=386 Identities=32% Similarity=0.554 Sum_probs=362.9
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCC-CCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015130 21 FTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (413)
Q Consensus 21 ~~~~~I~G~~~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 99 (413)
.+++||||+|+. ++++++++||+ ||+++++++.++.+|+++|+++|++||. .|+++|..+|.++|+++++.|+++
T Consensus 37 ~~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (516)
T 1uzb_A 37 HYPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRR 112 (516)
T ss_dssp EECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 35789999999 6999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeee--ccCCccceeeeeccceEEEeCCCchhHHhhH
Q 015130 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (413)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (413)
+++|++++++|+|||+.+++. |+..+++.+++++..++++.+...+ ...+...+++++|+|||++|+|||||+++.+
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 191 (516)
T 1uzb_A 113 KRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHH
Confidence 999999999999999999986 9999999999999988877654322 1234456889999999999999999999999
Q ss_pred HHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 015130 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (413)
Q Consensus 178 ~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (413)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.+++..|+.||+|+.|+||||+.+|+.|++.
T Consensus 192 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~ 271 (516)
T 1uzb_A 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777899999999999999999999999999998
Q ss_pred Hhh-----CCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccC
Q 015130 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (413)
Q Consensus 258 ~~~-----~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~ 332 (413)
++. +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++
T Consensus 272 aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 351 (516)
T 1uzb_A 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred hhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence 872 468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEec
Q 015130 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (413)
Q Consensus 333 g~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 412 (413)
||| ++++++|||+++.+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 352 G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 429 (516)
T 1uzb_A 352 GPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp SCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeC
Confidence 999 99999999999999999999999999999 9999997632469999999999999999999999999999999998
Q ss_pred C
Q 015130 413 K 413 (413)
Q Consensus 413 ~ 413 (413)
|
T Consensus 430 ~ 430 (516)
T 1uzb_A 430 D 430 (516)
T ss_dssp S
T ss_pred C
Confidence 6
No 33
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.6e-86 Score=672.89 Aligned_cols=387 Identities=38% Similarity=0.615 Sum_probs=366.1
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015130 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (413)
Q Consensus 20 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 99 (413)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|+++++.|+++
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 83 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENR 83 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 456899999999987888999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeeccCCccceeeeeccceEEEeCCCchhHHhhHHH
Q 015130 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (413)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (413)
+++|++++++|+|||+.+++..|+..+++.++++++.+++..+... ....+++++|+|||++|+|||||+...+++
T Consensus 84 ~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 159 (478)
T 3ty7_A 84 KDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLK 159 (478)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHH
Confidence 9999999999999999999435999999999999998877655432 245788999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 015130 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (413)
Q Consensus 180 l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (413)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.|++.++
T Consensus 160 ~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa 239 (478)
T 3ty7_A 160 LAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239 (478)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTT
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988789999999999999999999999999999998
Q ss_pred hCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCC
Q 015130 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (413)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~ 339 (413)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|.++++++++|+|++++
T Consensus 240 -~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 318 (478)
T 3ty7_A 240 -KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDG 318 (478)
T ss_dssp -TTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred -hcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCccc-C--CCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-G--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 340 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-~--~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+++|||++++++++++++|++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 319 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~ 395 (478)
T 3ty7_A 319 TQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYND 395 (478)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCC
Confidence 999999999999999999999999999999999432 1 3699999999999999999999999999999999986
No 34
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=2.6e-86 Score=669.78 Aligned_cols=371 Identities=26% Similarity=0.435 Sum_probs=356.3
Q ss_pred eEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhh
Q 015130 38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW 117 (413)
Q Consensus 38 ~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 117 (413)
+++++||+||+++++++.++.+|+++++++|++||. .|++++..+|.++|+++++.|++++++|++++++|+|||+.+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 478999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred hhhCchHHHHHHHHHHHHHhhhhcCeeeeccCCccceeeeeccceEEEeCCCchhHHhhHHHHhhHhhcCCEEEEecCCC
Q 015130 118 AKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197 (413)
Q Consensus 118 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~Vilkps~~ 197 (413)
++. |+..+++.+++++..+++..+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 83 a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SKE-EVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 996 9999999999999998877666544445567899999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceE
Q 015130 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (413)
Q Consensus 198 ~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~i 277 (413)
+|+++..|++++.++|+|+|++|+|+|++.++++ |+.||+||.|+||||+.+|+.|++.++ +++||+++|||||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAG-KNLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHh-ccCCceEeecCCCCcce
Confidence 9999999999999999999999999998777788 999999999999999999999999999 78999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCCCcccccCCHHhHHHHHHH
Q 015130 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (413)
Q Consensus 278 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~Gpl~~~~~~~~~~~~ 357 (413)
|++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|||+++++++|||+++.+++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 375 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVED 375 (484)
T ss_dssp HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESS
T ss_pred HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCC
Confidence 99999999999999986556799999999999999999999999999999999986
No 35
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=4e-86 Score=671.70 Aligned_cols=383 Identities=29% Similarity=0.464 Sum_probs=362.3
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015130 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (413)
Q Consensus 20 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 99 (413)
..+++||||+|+.+. ++++++||+||+++++++.++.+|+++|+++|++||.. .|+++|..+|.++|+++++.|+++
T Consensus 17 ~~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~ 93 (501)
T 1uxt_A 17 PVYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERN 93 (501)
T ss_dssp EEECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHh
Confidence 346789999999753 78999999999999999999999999999999999951 399999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeecc--C---CccceeeeeccceEEEeCCCchhHH
Q 015130 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--R---ALQGYTLREPIGVVGHIIPWNFPTT 174 (413)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~P~Gvv~~i~p~n~P~~ 174 (413)
+++|++++++|+|||..+++. |+..+++.+++++.++++..+...+.. . +...+++++|+|||++|+|||||+.
T Consensus 94 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 172 (501)
T 1uxt_A 94 LDVFAEVLVMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLF 172 (501)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHH
Confidence 999999999999999999985 999999999999998887766654432 2 2357899999999999999999999
Q ss_pred hhHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 015130 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (413)
Q Consensus 175 ~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (413)
..++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++ ++++.|+.||++|.|+||||+.+|+.|
T Consensus 173 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i 251 (501)
T 1uxt_A 173 DAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERV 251 (501)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999977 899999999999999999999999999
Q ss_pred HHHHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCC
Q 015130 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (413)
Q Consensus 255 ~~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~ 334 (413)
++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|.++++++++||
T Consensus 252 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 328 (501)
T 1uxt_A 252 VKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGD 328 (501)
T ss_dssp HHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSC
T ss_pred HHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCC
Confidence 99876 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCC-CeEeeEEEEeCC---CCCcccccccccceeEEEE
Q 015130 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG-YYIEPTIFTNVT---EDMLIAKNEIFGPVMALMK 410 (413)
Q Consensus 335 p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g-~~~~Ptvl~~v~---~~~~i~~~E~fgPvl~v~~ 410 (413)
|.++++++|||+++.++++++++|++++++||++++||.. .| +|++|||+.+++ ++|++++||+||||++|++
T Consensus 329 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~ 405 (501)
T 1uxt_A 329 PRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVE 405 (501)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEE
T ss_pred ccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEe
Confidence 9999999999999999999999999999999999999975 58 999999999999 9999999999999999999
Q ss_pred ecC
Q 015130 411 FKK 413 (413)
Q Consensus 411 ~~~ 413 (413)
|+|
T Consensus 406 ~~~ 408 (501)
T 1uxt_A 406 VKD 408 (501)
T ss_dssp ESS
T ss_pred eCC
Confidence 986
No 36
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.9e-85 Score=666.08 Aligned_cols=384 Identities=27% Similarity=0.407 Sum_probs=363.7
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 015130 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (413)
Q Consensus 23 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (413)
++||||+|+.+. +.++.++||+||+++++++.++.+++++++++|++||. .|+++|..+|.++|+++++.|++++++
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999864 46789999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeeccCCccceeeeeccceEEEeCCCchhHHhhHHHHhh
Q 015130 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (413)
Q Consensus 103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 182 (413)
|++++++|+|||..+++. |+..+++.+++++...+...+...+...+...+++++|+|||++|+|||||+.+.++++++
T Consensus 84 la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWESAT-EVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 999999999999999986 9999999999999888776655443233445677899999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCC
Q 015130 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (413)
Q Consensus 183 AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 262 (413)
||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++| +.+.++.|+.||++|.|+||||+.+|+.|++.++ ++
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa-~~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFG-GQ 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTT-TC
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh-cc
Confidence 999999999999999999999999999999999999999999 6789999999999999999999999999999998 88
Q ss_pred Ccce-EEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecch-HHHHHHHHHHHHHcccCCC-CCCCC
Q 015130 263 LKPV-SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGD-PFDPA 339 (413)
Q Consensus 263 ~~~~-~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~~~f~~~L~~~~~~~~~g~-p~~~~ 339 (413)
++|+ ++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ +++|+++|+++++++++|+ |.+++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 9998 7999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 340 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+++|||+++.+++++.++|++++++||++++||...+..|+|++|||+. ++++|++++||+||||++|++|+|
T Consensus 321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~ 393 (490)
T 3ju8_A 321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSD 393 (490)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESS
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCC
Confidence 9999999999999999999999999999999997655679999999998 999999999999999999999986
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=2.6e-85 Score=671.38 Aligned_cols=388 Identities=26% Similarity=0.393 Sum_probs=361.3
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015130 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (413)
Q Consensus 20 ~~~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~ 98 (413)
..+++||||+|+.+. ..+.++||+| |+++++++.++.+|+++|+++|++||. .|+++|..+|.++|++++++|++
T Consensus 62 ~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 457899999999743 4678899998 799999999999999999999999999 89999999999999999999999
Q ss_pred h-HHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeee-ccCCccceeeeeccceEEEeCCCchhHHhh
Q 015130 99 H-AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (413)
Q Consensus 99 ~-~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (413)
+ +++|+.++++|+|||+.+++..++..+++.+++++.+++++.+.... ...+...+.++.|+|||++|+|||||+...
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 9 99999999999999999998623999999999999998776553321 112334566778889999999999999999
Q ss_pred HHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHH
Q 015130 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (413)
Q Consensus 177 ~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (413)
.++++||| +||+||+|||+.+|+++.+|+++|.++|+|+|+||+|+|++.++++.|+.||+|+.|+||||+.+|+.|++
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~ 296 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWR 296 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhhCCCcc------eEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcc
Q 015130 257 AAATSNLKP------VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 330 (413)
Q Consensus 257 ~~~~~~~~~------~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~ 330 (413)
.++ ++++| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++|++|+++|+++++++
T Consensus 297 ~aa-~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l 375 (563)
T 4e3x_A 297 QVA-QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375 (563)
T ss_dssp HHH-HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHH-hhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhc
Confidence 998 67774 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC-CCCCCcccccCCHHhHHHHHHHHHHHHH-cCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEE
Q 015130 331 VVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 408 (413)
Q Consensus 331 ~~g~p-~~~~~~~Gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 408 (413)
++||| .++++++||++++.+++++.++|+++++ +|+++++||..+...|+|++|||+.+++++|++++||+||||++|
T Consensus 376 ~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V 455 (563)
T 4e3x_A 376 KVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTV 455 (563)
T ss_dssp CBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEE
T ss_pred cCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEE
Confidence 99999 9999999999999999999999999996 899999999876567999999999999999999999999999999
Q ss_pred EEecC
Q 015130 409 MKFKK 413 (413)
Q Consensus 409 ~~~~~ 413 (413)
++|+|
T Consensus 456 ~~~~d 460 (563)
T 4e3x_A 456 YVYPD 460 (563)
T ss_dssp EEECG
T ss_pred EEECC
Confidence 99974
No 38
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=1.6e-83 Score=648.69 Aligned_cols=374 Identities=28% Similarity=0.452 Sum_probs=355.4
Q ss_pred CCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc
Q 015130 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL 114 (413)
Q Consensus 35 ~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 114 (413)
+..+++++||+||+++++++.++.+++++++++|++||. .|+++|..+|.++|+++++.|++++++|++++++|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 346789999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred hhhhhhCchHHHHHHHHHHHHHhhhhcCeeeeccCCccceeeeeccceEEEeCCCchhHHhhHHHHhhHhhcCCEEEEec
Q 015130 115 HSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194 (413)
Q Consensus 115 ~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~Vilkp 194 (413)
..+++. |+..+++.++++++..+...+.......+...+++++|+|||++|+|||||++..++++++||++||+||+||
T Consensus 83 ~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 999986 9999999999999988776554422224556789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCC
Q 015130 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274 (413)
Q Consensus 195 s~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~ 274 (413)
|+.+|+++.+|++++.++|+|+|++|+++| +.+.+..|+.||+++.|+||||+.+|+.|++.++ ++++|+++|+||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHh-ccCCceEEEcCCCC
Confidence 999999999999999999999999999999 4578899999999999999999999999999999 78999999999999
Q ss_pred ceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCCCcccccCCHHhHHHH
Q 015130 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354 (413)
Q Consensus 275 ~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~Gpl~~~~~~~~~ 354 (413)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|+|.++++++|||+++.+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 355 LSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 355 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~ 378 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKD 378 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCC
Confidence 99999999999999999986556799999999999999999999999999999999986
No 39
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=1.2e-82 Score=685.01 Aligned_cols=388 Identities=34% Similarity=0.523 Sum_probs=367.2
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015130 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (413)
Q Consensus 20 ~~~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~ 98 (413)
..+++||||+|+. ++++++++||+| ++++++++.++.+++++|+++|++||. .|+++|..+|+++|++++++|++
T Consensus 530 ~~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~ 605 (1026)
T 4f9i_A 530 KTYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARK 605 (1026)
T ss_dssp EEECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3568999999997 457899999998 899999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCeeeec-cCCccceeeeeccceEEEeCCCchhHHhhH
Q 015130 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (413)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (413)
++++|++++++|+|||..++.. |+..+++.++||+.+++++.+..... ..+...++.++|+|||++|+|||||+.+.+
T Consensus 606 ~~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 606 RLFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp THHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHH
Confidence 9999999999999999999987 99999999999999988765544332 345667889999999999999999999999
Q ss_pred HHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 015130 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (413)
Q Consensus 178 ~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (413)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|+.||+|+.|+||||+.+|+.|++.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~ 764 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIER 764 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred Hhh-----CCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccC
Q 015130 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (413)
Q Consensus 258 ~~~-----~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~ 332 (413)
++. ++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++++|+++|+++++++++
T Consensus 765 aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 765 AAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred hhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 872 368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEec
Q 015130 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (413)
Q Consensus 333 g~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 412 (413)
|+|.++++++||++++.+++++.++|++++++| ++++||..+...|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 845 G~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 923 (1026)
T 4f9i_A 845 GPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923 (1026)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999997654459999999999999999999999999999999998
Q ss_pred C
Q 015130 413 K 413 (413)
Q Consensus 413 ~ 413 (413)
|
T Consensus 924 d 924 (1026)
T 4f9i_A 924 D 924 (1026)
T ss_dssp S
T ss_pred C
Confidence 6
No 40
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=2.8e-82 Score=649.20 Aligned_cols=383 Identities=24% Similarity=0.365 Sum_probs=347.8
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhh-cccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015130 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEH 99 (413)
Q Consensus 21 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a-~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 99 (413)
.+++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+ .|+++|..+|.++|+++++.|+++
T Consensus 7 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (534)
T 2y53_A 7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAK 82 (534)
T ss_dssp ECCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHh
Confidence 467899999997544 579999999999999999988 9999999999999 58 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhhcCe-------eeecc-CC-ccceeeeecc-ceEEEeCCC
Q 015130 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-------VLKMS-RA-LQGYTLREPI-GVVGHIIPW 169 (413)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~-------~~~~~-~~-~~~~~~~~P~-Gvv~~i~p~ 169 (413)
+++|++++++|+|||+.++.. |+..+++.+++|+.+++++.+. ..+.. .+ ...+.+++|+ |||++|+||
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~Pw 161 (534)
T 2y53_A 83 RGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAF 161 (534)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCT
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCC
Confidence 999999999999999999986 9999999999999887665331 11211 11 2357889997 999999999
Q ss_pred chhHHhhHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCCh
Q 015130 170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 248 (413)
Q Consensus 170 n~P~~~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~ag-lP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~ 248 (413)
|||+++.++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|++.+++..| +++++|+||||+
T Consensus 162 N~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~ 238 (534)
T 2y53_A 162 NFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSA 238 (534)
T ss_dssp TCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCH
T ss_pred chHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 79999999999654433222 679999999999
Q ss_pred HHHHHHHHHHh-hCCCcceEEeCCCCCceEEcCCC-----CHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHH
Q 015130 249 DVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322 (413)
Q Consensus 249 ~~g~~i~~~~~-~~~~~~~~lelgG~~~~iV~~da-----dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~ 322 (413)
.+|+.|++.++ .+++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++++|+++
T Consensus 239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 99999998763 26899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHcccCCCCCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccC------CCCCeEeeEEEEeCCCC--C
Q 015130 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------KKGYYIEPTIFTNVTED--M 394 (413)
Q Consensus 323 L~~~~~~~~~g~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~------~~g~~~~Ptvl~~v~~~--~ 394 (413)
|+++++++++|||+++++++|||+++.++++++++|+++ .+|+++++||.... ..|+|++|||+.+++++ |
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 999999999999999999999999999999999999999 68999999997421 35899999999999987 6
Q ss_pred cccccccccceeEEEEec
Q 015130 395 LIAKNEIFGPVMALMKFK 412 (413)
Q Consensus 395 ~i~~~E~fgPvl~v~~~~ 412 (413)
++++||+||||++|++|+
T Consensus 398 ~i~~eEiFGPVl~v~~~~ 415 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYR 415 (534)
T ss_dssp STTTCCCSSSEEEEEEEC
T ss_pred HHHhCCCcCCEEEEEEEC
Confidence 999999999999999998
No 41
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=3.5e-82 Score=640.04 Aligned_cols=372 Identities=30% Similarity=0.462 Sum_probs=347.6
Q ss_pred CCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Q 015130 34 VSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGK 113 (413)
Q Consensus 34 ~~~~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 113 (413)
..+++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|+++++.|++|+++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3567999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred chhhhhhCchHHHHHHHHHHHHHhhhhcCeee-ec-cCCccceeeeeccceEEEeCCCchhHHhhHHHHhhHhhcCCEEE
Q 015130 114 LHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191 (413)
Q Consensus 114 ~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~Vi 191 (413)
+..+. . |+...+..+++++..+.+...... .. .++...+.+++|+|||++|+|||||+++.++++++||++||+||
T Consensus 81 ~~~~~-~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSITV-L-EIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHHH-H-HHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHHH-H-HHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 86544 4 899999999999988766543322 22 23445667889999999999999999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCC
Q 015130 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271 (413)
Q Consensus 192 lkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelg 271 (413)
+|||+.+|+++..+.+++.++|+|+|++++++| +.+.+..|+.| ++.|+||||+.+|+.|++.++ ++++|+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa-~~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAA-RRFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHH-HHTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhh-cccccccccCC
Confidence 999999999999999999999999999999999 56788999876 899999999999999999999 78999999999
Q ss_pred CCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCCCcccccCCHHhH
Q 015130 272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 351 (413)
Q Consensus 272 G~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~Gpl~~~~~~ 351 (413)
||||+||++|||++.+++.+++++|.|+||.|++++|||||++++++|+++|.+++.++++|+|.++++++||++++.++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEeCCcccC-CCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 352 DRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 352 ~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+++.+++++++++|++++.||.... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~ 377 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPD 377 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred HHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECC
Confidence 9999999999999999999997642 4689999999999999999999999999999999986
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=3.5e-78 Score=608.18 Aligned_cols=362 Identities=24% Similarity=0.398 Sum_probs=322.4
Q ss_pred CeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh
Q 015130 37 KTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS 116 (413)
Q Consensus 37 ~~~~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 116 (413)
..++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|++++++|++++++|+|||+.
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4678999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhhCchHHHHHHHHHHHHHhhhhcCe-eeec---cCCccceeeeeccceEEEeCCCchhHHhhHHHHhhHhhcCCEEEE
Q 015130 117 WAKMGDIPGAANTLRYYAGAADKIHGE-VLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192 (413)
Q Consensus 117 ~a~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~Vil 192 (413)
+++..|+..+++.++++++.++..... .... ..+...+++++|+|||++|+|||||+...++++++||++||+||+
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 998449999999999999887765432 2221 134567899999999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCC
Q 015130 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272 (413)
Q Consensus 193 kps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG 272 (413)
|||+.+|+++.+|++++.++ +|+|++|+|+| +.+.+..|++ +++|.|+||||+.+|+.|++.++ +++||+++||||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa-~~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHh-hccCceEEECCC
Confidence 99999999999999999999 99999999999 6688999998 78999999999999999999999 899999999999
Q ss_pred CCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCCCcccccCCHHhHH
Q 015130 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFD 352 (413)
Q Consensus 273 ~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~Gpl~~~~~~~ 352 (413)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|++++++++ |.++ ++|||+++++++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~ 314 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQ 314 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 6665 999999999999
Q ss_pred HHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 353 RILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 353 ~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+++++|+++. +++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 315 rv~~~i~~a~---~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 371 (457)
T 3lns_A 315 RLVSLLEATQ---GQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDS 371 (457)
T ss_dssp HHHHHHHHCC---SEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESC
T ss_pred HHHHHHHhcC---CeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCC
Confidence 9999999863 5999999764 3699999999999999999999999999999999986
No 43
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.1e-78 Score=619.65 Aligned_cols=373 Identities=24% Similarity=0.308 Sum_probs=339.6
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEE-EEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015130 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (413)
Q Consensus 20 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~-~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~ 98 (413)
...++||||+|+.+.+ ++||+||++++ +++.++.+|+++|+++|++||. .|+++|..+|.++|+++++.|++
T Consensus 28 ~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3v4c_A 28 PKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIEA 100 (528)
T ss_dssp CCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 4568999999997532 99999999998 9999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHHHhhhh--cCeeee----c---cCCccceeeeeccceEEEeCCC
Q 015130 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI--HGEVLK----M---SRALQGYTLREPIGVVGHIIPW 169 (413)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~--~~~~~~----~---~~~~~~~~~~~P~Gvv~~i~p~ 169 (413)
++++|++++++|+|||+.+++. |+..+++.++++++.+++. .+.... . ..+...+++++|+|||++|+||
T Consensus 101 ~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw 179 (528)
T 3v4c_A 101 RAEAITEIGSQETGLPEARLNG-ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGAS 179 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCS
T ss_pred hHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCC
Confidence 9999999999999999999986 9999999999999988762 222221 0 1234467899999999999999
Q ss_pred chhHHhhH--HHHhhHhhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEE
Q 015130 170 NFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 243 (413)
Q Consensus 170 n~P~~~~~--~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l----~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ 243 (413)
|||+.+.+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|.+.++++.|+.||+|+.|+
T Consensus 180 N~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~ 259 (528)
T 3v4c_A 180 NFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVG 259 (528)
T ss_dssp SSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEE
T ss_pred cchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEE
Confidence 99999865 89999999999999999999999999999875 5689999999999998888999999999999999
Q ss_pred EeCChHHHHHHHHHHhhCCC--cceEEeCCCCCceEEcCCC---CHHHHHHHHHHHhcccCCCccccCceeEEecc-hHH
Q 015130 244 FTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDV---DVNTAADMALLGILFNKGEICVASSRVYVQEG-IYD 317 (413)
Q Consensus 244 ftGs~~~g~~i~~~~~~~~~--~~~~lelgG~~~~iV~~da---dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~ 317 (413)
||||+.+|+.|++.++ +++ +|+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +++
T Consensus 260 fTGS~~~G~~i~~~aa-~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d 338 (528)
T 3v4c_A 260 FTGSLAGGRALFDLCA-ARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADAD 338 (528)
T ss_dssp EESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHH
T ss_pred EECChHHHHHHHHHHh-hccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHH
Confidence 9999999999999999 788 9999999999999999999 88999999999999999999999999999997 999
Q ss_pred HHHHHHHHHHHcccCCCCCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCC---C
Q 015130 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTED---M 394 (413)
Q Consensus 318 ~f~~~L~~~~~~~~~g~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~---~ 394 (413)
+|+++|++++++++.| +.+||++++.+.+++.++++ ++|+++++||.. .|+|++|||+.+++++ |
T Consensus 339 ~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~ 406 (528)
T 3v4c_A 339 RFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLAD 406 (528)
T ss_dssp HHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHC
T ss_pred HHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccC
Confidence 9999999999998643 67899998888777777653 479999999974 6999999999988887 8
Q ss_pred cccccccccceeEEEEecC
Q 015130 395 LIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 395 ~i~~~E~fgPvl~v~~~~~ 413 (413)
++++||+||||++|++|+|
T Consensus 407 ~i~~eEiFGPVl~V~~~~~ 425 (528)
T 3v4c_A 407 HALGEEVFGPLGLVVRVGS 425 (528)
T ss_dssp GGGGCCCSSSEEEEEEESS
T ss_pred hhhcccccCCeEEEEecCC
Confidence 9999999999999999986
No 44
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=5.5e-77 Score=606.79 Aligned_cols=363 Identities=21% Similarity=0.288 Sum_probs=332.6
Q ss_pred CCCCCeEEeecCCCCceE-EEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 015130 33 SVSGKTFETIDPRTGEAI-ARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA 111 (413)
Q Consensus 33 ~~~~~~~~~~~P~tg~~i-~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 111 (413)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+ .|+++|..+|.++|+++++.|++++++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 446678999999999999 79999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCchhhhhhCchHHHHHHHHHHHHHhhh--hcCeeeec----c-C-C-ccceeeeeccceEEEeCCCchhHHhh--HHHH
Q 015130 112 GKLHSWAKMGDIPGAANTLRYYAGAADK--IHGEVLKM----S-R-A-LQGYTLREPIGVVGHIIPWNFPTTMF--FMKV 180 (413)
Q Consensus 112 Gk~~~~a~~~ev~~~~~~l~~~~~~~~~--~~~~~~~~----~-~-~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~l 180 (413)
|||+.++.. |+..+++.++++++.+++ ..+..... . + + ...+++++|+|||++|+|||||++.. .+++
T Consensus 81 Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 999999986 999999999999988865 33332210 0 1 1 13578999999999999999999985 4999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHH
Q 015130 181 SPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (413)
Q Consensus 181 ~~AL~aGN~Vilkps~~~~~~~~~l~~~l----~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (413)
++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999998 56799999999999977789999999999999999999999999999
Q ss_pred HHhhCCC--cceEEeCCCCCceEEcCCCCHH--HHHHHHHHHhcccCCCccccCceeEEecc-hHHHHHHHHHHHHHccc
Q 015130 257 AAATSNL--KPVSLELGGKSPLLIFDDVDVN--TAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWV 331 (413)
Q Consensus 257 ~~~~~~~--~~~~lelgG~~~~iV~~dadl~--~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~L~~~~~~~~ 331 (413)
.++ +++ ||+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ ++++|+++|.+++++++
T Consensus 240 ~aa-~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhh-ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 998 665 9999999999999999999999 99999999999999999999999999999 99999999999999986
Q ss_pred CCCCCCCCCcccccCCHHhHHHHHHHHHHHHH-cCCEEEeCCcccCCCCCeEeeEEEEeCCCC---CcccccccccceeE
Q 015130 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTED---MLIAKNEIFGPVMA 407 (413)
Q Consensus 332 ~g~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~---~~i~~~E~fgPvl~ 407 (413)
+ ||++++.+.+++.++|+++++ +|+++++||. .|+|++|||+.+++++ |++++||+||||++
T Consensus 319 ~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~ 384 (510)
T 1ez0_A 319 P----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384 (510)
T ss_dssp C----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred C----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence 3 688888899999999999994 8999999996 2899999999988777 99999999999999
Q ss_pred EEEecC
Q 015130 408 LMKFKK 413 (413)
Q Consensus 408 v~~~~~ 413 (413)
|++|+|
T Consensus 385 v~~~~~ 390 (510)
T 1ez0_A 385 IVVCEN 390 (510)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 999986
No 45
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=3e-76 Score=594.64 Aligned_cols=345 Identities=27% Similarity=0.407 Sum_probs=316.3
Q ss_pred CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHHHHH
Q 015130 56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135 (413)
Q Consensus 56 ~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~ 135 (413)
.+.+|+++++++|++||. .|++++..+|.++|+++++.|++++++|++++++|+|||..++...|+..++..+++++.
T Consensus 15 ~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp ---CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456799999999999999 999999999999999999999999999999999999999999975599999999888876
Q ss_pred HhhhhcCee-e---eccCCccceeeeeccceEEEeCCCchhHHhhHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHH
Q 015130 136 AADKIHGEV-L---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 211 (413)
Q Consensus 136 ~~~~~~~~~-~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~ 211 (413)
......... . ....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 172 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ 172 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 654432211 1 112234678999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHH
Q 015130 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 291 (413)
Q Consensus 212 aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i 291 (413)
+ +|+|++|+++|++ +.+..|+.| ++|.|+||||+.+|+.|++.++ +++||+++|||||||+||++|||+|.|++.+
T Consensus 173 a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 Y-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp H-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred h-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHh-hccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 8 9999999999954 556778877 8999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEeC
Q 015130 292 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371 (413)
Q Consensus 292 ~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~g 371 (413)
++++|.|+||.|++++|||||++++|+|+++|+++++++ +|+|.++++++|||+++.+++++.++| +||++++|
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G 322 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG 322 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence 999999999999999999999999999999999999998 699999999999999999999999998 69999999
Q ss_pred CcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 372 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 372 g~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
|..+ ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 323 G~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 363 (469)
T 3sza_A 323 GTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRS 363 (469)
T ss_dssp CCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSS
T ss_pred CccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCC
Confidence 9864 4699999999999999999999999999999999986
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=5.4e-74 Score=616.64 Aligned_cols=352 Identities=31% Similarity=0.470 Sum_probs=332.1
Q ss_pred EeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHH
Q 015130 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132 (413)
Q Consensus 53 v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~ 132 (413)
++.++.+++++|+++|++||. .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++.. |+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHH
Confidence 789999999999999999999 899999999999999999999999999999999999999999986 99999999999
Q ss_pred HHHHhhhhcCee--eeccCCccceeeeeccceEEEeCCCchhHHhhHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHH
Q 015130 133 YAGAADKIHGEV--LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (413)
Q Consensus 133 ~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~ 210 (413)
|+..++...+.. .+...+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999988765543 333345678899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC--CCcceEEeCCCCCceEEcCCCCHHHHH
Q 015130 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAA 288 (413)
Q Consensus 211 ~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~--~~~~~~lelgG~~~~iV~~dadl~~a~ 288 (413)
++|+|+|++|+|+|++.+ +..|+.||+|+.|+||||+.+|+.|++.++.. +++|+++|+|||||+||++|||++.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998766 99999999999999999999999999998832 489999999999999999999999999
Q ss_pred HHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEE
Q 015130 289 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 368 (413)
Q Consensus 289 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v 368 (413)
+.+++++|.|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++.++|++++++| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998 88
Q ss_pred EeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 369 LTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 369 ~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+||..+ ..|+|+.|||+.+ +++++++||+||||++|++|+|
T Consensus 859 -~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~ 899 (1001)
T 3haz_A 859 -HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRP 899 (1001)
T ss_dssp -EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECG
T ss_pred -eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCC
Confidence 888764 4599999999974 6889999999999999999974
No 47
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.5e-66 Score=522.74 Aligned_cols=334 Identities=19% Similarity=0.272 Sum_probs=287.5
Q ss_pred EeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCchHHHHHHH-H
Q 015130 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL-R 131 (413)
Q Consensus 53 v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l-~ 131 (413)
++.++.+++++++++|++||+ .|+++|.++|.++|+++++.|++++++|++++++|+||+..+++..|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999 9999999999999999999999999999999999999999998743666666655 3
Q ss_pred HHHHHhhhhcCeeeeccCCccceeeeeccceEEEeCCCchhHHhhHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHH-
Q 015130 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK- 210 (413)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~- 210 (413)
++.. .+..+ ..+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+++++.
T Consensus 79 ~~~~--~~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKD--EQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTT--CCCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhh--ccccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 3322 11111 1222234457889999999999999999999999999999999999999999999999998888775
Q ss_pred ---HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceEEcCCCCHHHH
Q 015130 211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 287 (413)
Q Consensus 211 ---~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a 287 (413)
++|+|+|++++|+|.+.+.++.|+.||+++.|+||||+.+++ .++ +.+||+++|+|||||+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~-~~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAY-SSGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHH-TSSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHH-hcCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 799999999999998888999999999999999999998644 455 678999999999999999999999999
Q ss_pred HHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCCCcccccCCHHhHHHHHHHHHHHHHcCCE
Q 015130 288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367 (413)
Q Consensus 288 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~ 367 (413)
++.+++++|+|+||.|++++|||||+++||+|+++|+++ +||+++++++++++++|+++...|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999875 39999999999999999887677888
Q ss_pred EEeCCccc---CCCCCeEeeEE-------EEeCCCCCcccccccccceeEEEEecC
Q 015130 368 LLTGGKPI---GKKGYYIEPTI-------FTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 368 v~~gg~~~---~~~g~~~~Ptv-------l~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+ .||... ...|+|++||+ +.++++++++++ |+||||++|++|+|
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~ 349 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADN 349 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESS
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCC
Confidence 6 477542 13589999997 567889999876 89999999999986
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.9e-66 Score=523.75 Aligned_cols=336 Identities=20% Similarity=0.237 Sum_probs=293.2
Q ss_pred EeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCchHHHHHHHHH
Q 015130 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132 (413)
Q Consensus 53 v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~ 132 (413)
++.++.+++++++++|++||+ .|+++|.++|.++|+++++.|++++++|++++++|+||+..+++..+....++.+..
T Consensus 6 ~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~ 83 (464)
T 3k9d_A 6 KDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYN 83 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence 455678999999999999999 899999999999999999999999999999999999999988754233334443333
Q ss_pred HHHHhhhhcCeeeeccCCccceeeeeccceEEEeCCCchhHHhhHHHHhhHhhcCCEEEEecCCCChHHHHHHHH----H
Q 015130 133 YAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH----L 208 (413)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~----~ 208 (413)
+....+ ..+ ......+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++ +
T Consensus 84 ~~~~~~-~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~ 161 (464)
T 3k9d_A 84 YIKDMK-TIG-MLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEA 161 (464)
T ss_dssp HHTTCC-CSE-EEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhhccc-ccc-eeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHH
Confidence 322211 111 1222345677889999999999999999999999999999999999999999999999998654 5
Q ss_pred HHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCC-CCCceEEcCCCCHHHH
Q 015130 209 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG-GKSPLLIFDDVDVNTA 287 (413)
Q Consensus 209 l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelg-G~~~~iV~~dadl~~a 287 (413)
+.++|+|+|++++|+|.+.+.++.|+.||+||.|+||||+.+ .+.++ +++||+ +|+| ||+|+||++|||++.|
T Consensus 162 ~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~-~~~kpv-lelG~G~~p~iV~~dADl~~A 235 (464)
T 3k9d_A 162 AEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAY-SSGTPA-IGVGPGNGPAFIERSANIPRA 235 (464)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHT-TSSSCE-EEBCCCCCEEEECTTSCHHHH
T ss_pred HHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHH-hcCCcE-EeeCCCCCeEEECCCCCHHHH
Confidence 688999999999999987889999999999999999999984 45566 688999 7888 9999999999999999
Q ss_pred HHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHH-------HcccCCCCC-CCCCcccccCCHHhHHHHHHHHH
Q 015130 288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA-------KAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIE 359 (413)
Q Consensus 288 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~-------~~~~~g~p~-~~~~~~Gpl~~~~~~~~~~~~i~ 359 (413)
++.+++++|.|+||.|++++|||||+++|++|+++|+++. +.+++|+|. ++++++||+++.++++++.++++
T Consensus 236 a~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~ 315 (464)
T 3k9d_A 236 VKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAG 315 (464)
T ss_dssp HHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999985 466789887 77899999999999999999999
Q ss_pred HHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 360 HGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 360 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
.++.+|+++++||.. ++++++++. +|+||||++|++|+|
T Consensus 316 ~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~ 354 (464)
T 3k9d_A 316 LTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAET 354 (464)
T ss_dssp CCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESS
T ss_pred hhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCC
Confidence 999999999999853 467788865 899999999999986
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=3e-66 Score=520.61 Aligned_cols=321 Identities=16% Similarity=0.140 Sum_probs=257.2
Q ss_pred EeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-------C
Q 015130 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA-------G 112 (413)
Q Consensus 40 ~~~~P~tg~~i~~v~~~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------G 112 (413)
-++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|++++++|++++++|+ |
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G 87 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA 87 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence 4789999999999999999999999999999999 899999999999999999999999999999999999 7
Q ss_pred Cchh----hhhhCchHHHHHHHHHHHHHhhhhcCeeeecc---CCccceeeeeccceEEEeCCCchhHHhhHHHHhhHhh
Q 015130 113 KLHS----WAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185 (413)
Q Consensus 113 k~~~----~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~ 185 (413)
||+. ++.. |+..+++.+++++..+++..+...+.. .+...+++++|+|||++|+||| |...+ +++++||+
T Consensus 88 k~~~~rl~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 88 APLLKRLSLSTS-KLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHHTTCCCHH-HHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred CchhhhhhhhHH-HHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 9997 4654 999999999999988877666543321 3445689999999999999666 66655 79999999
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC
Q 015130 186 AGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (413)
Q Consensus 186 aGN~Vilkps~~~~~~~~~l~~~l~~a----glP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 261 (413)
+||+||+|||+.+|+++.+|++++.++ | |+|++|+|+| +.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999999 9 9999999999 6678999999999999999999999999999876
Q ss_pred CCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCCCc
Q 015130 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341 (413)
Q Consensus 262 ~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~ 341 (413)
+||+++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||+++++
T Consensus 241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------ 294 (463)
T 2h5g_A 241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------ 294 (463)
T ss_dssp -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT------------------------
T ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc------------------------
Confidence 899999999999999999999999999999999999 999999999999999998
Q ss_pred ccccCCHHhHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 342 ~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
||+ +++++++++++|++++.|+... ..|+|+ +++|++++||+||||++|++|+|
T Consensus 295 -~p~--------~~~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~ 348 (463)
T 2h5g_A 295 -TPL--------FDQIIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVDN 348 (463)
T ss_dssp -SHH--------HHHHHHHHHHTTCEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEESS
T ss_pred -hHH--------HHHHHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeCC
Confidence 343 2345888889999998555422 245543 57899999999999999999986
No 50
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=2.1e-64 Score=507.91 Aligned_cols=313 Identities=16% Similarity=0.150 Sum_probs=262.6
Q ss_pred HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch----hhhhhCchHH-HHHHHHHHH
Q 015130 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKMGDIPG-AANTLRYYA 134 (413)
Q Consensus 60 ~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~~ 134 (413)
.+++++++|++||+ .|+++|..+|.++|+++++.|++++++|++++++|+|||. .++...|+.. ++..+++++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 58899999999999 8999999999999999999999999999999999999998 7775238888 888888888
Q ss_pred HHhhhhc------Ceeeec---cCCccceeeeeccceEEEeCCCchhHHhhHHHHhhHhhcCCEEEEecCCCChHHHHHH
Q 015130 135 GAADKIH------GEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 205 (413)
Q Consensus 135 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l 205 (413)
+.++... +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 8776554 443331 12445689999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceE
Q 015130 206 AHLAK----L----AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (413)
Q Consensus 206 ~~~l~----~----aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~i 277 (413)
++++. + +|+|+|++|+|+ ++.++++.|..||+||.|+||||+.+|+.|++.+ +||+++|||||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6667899999999999999999999999999865 599999999999999
Q ss_pred EcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccC---CCCCCCCCcccccCCHHhHHHH
Q 015130 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRI 354 (413)
Q Consensus 278 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~---g~p~~~~~~~Gpl~~~~~~~~~ 354 (413)
|++|||++.|++.+++++|.|+| .|++++|||||+++ ++|+++|.++++++++ |||.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------- 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------- 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------
Confidence 99999999999999999999999 99999999999999 9999999999999987 87632
Q ss_pred HHH-HHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 355 LSY-IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 355 ~~~-i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+++ |++++ ++++||. | +.||++ ++++|++++||+||||++|++|+|
T Consensus 307 ~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~ 353 (468)
T 1vlu_A 307 KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTS 353 (468)
T ss_dssp HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCS
T ss_pred hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCC
Confidence 345 66665 3667775 4 689987 788999999999999999999986
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=3.9e-61 Score=482.10 Aligned_cols=306 Identities=21% Similarity=0.222 Sum_probs=255.6
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh----hhhh-------CchHHH
Q 015130 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGA 126 (413)
Q Consensus 58 ~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~ev~~~ 126 (413)
.+++++++++|++||. .|+++|..+|.++|+++++.|++++++|++++++|+||+.. +++. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 89999999999999999999999999999999999999853 4432 278889
Q ss_pred HHHHHHHHHHhhhhcCeeeec---cCCccceeeeeccceEEEeCCCchhHHhhHHHHhhHhhcCCEEEEecCCCChHHHH
Q 015130 127 ANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203 (413)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~Vilkps~~~~~~~~ 203 (413)
++.+++++.+.+.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999887642 333332 23456789999999999999999 8 588999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEEEeCCch-hHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceEE
Q 015130 204 YFAHLA----KLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (413)
Q Consensus 204 ~l~~~l----~~aglP~g~i~~v~g~~~-~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV 278 (413)
.+++++ .++|+|+|++|+|+|.+. ++++.|..||+|+.|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998654 5788888899999999999999999998865 5999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccC---CCCCCCCCcccccCCHHhHHHHH
Q 015130 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRIL 355 (413)
Q Consensus 279 ~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~---g~p~~~~~~~Gpl~~~~~~~~~~ 355 (413)
++|||++.|++.+++++|.|+| .|++++|||||++++|+|+++|+++++++++ |||. ..
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~ 317 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------AR 317 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HH
Confidence 9999999999999999999999 9999999999999999999999999999988 7642 13
Q ss_pred HHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 356 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 356 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
++|+++. .| ++ ++++|++++||+||||++|++|+|
T Consensus 318 ~~i~~a~---------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~ 352 (444)
T 4ghk_A 318 AVLEAAG---------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDG 352 (444)
T ss_dssp HHHHHTT---------------CC------CC--EECCSGGGTCC---CEEEEEEESS
T ss_pred HHHHhcc---------------cC------cc--cCCCchhhhccccCceEEEEEeCC
Confidence 5565542 12 12 356799999999999999999986
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=3.8e-61 Score=479.92 Aligned_cols=305 Identities=18% Similarity=0.215 Sum_probs=265.9
Q ss_pred CHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch----hhhhh-------CchHH
Q 015130 57 DKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKM-------GDIPG 125 (413)
Q Consensus 57 ~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~-------~ev~~ 125 (413)
.-+++++++++|++||. .|+++|..+|.++|+++++.|++++++|++++++|+||+. .++.. .|+..
T Consensus 12 ~~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~ 89 (427)
T 1o20_A 12 HMDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDE 89 (427)
T ss_dssp --CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHH
Confidence 34689999999999999 8999999999999999999999999999999999999986 45431 28999
Q ss_pred HHHHHHHHHHHhhhhcCeeeec---cCCccceeeeeccceEEEeCCCchhHHhhHHHHhhHhhcCCEEEEecCCCChHHH
Q 015130 126 AANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202 (413)
Q Consensus 126 ~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~Vilkps~~~~~~~ 202 (413)
+++.+++++++.+. .+...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++
T Consensus 90 ~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p-~-~~~~~~~~~ALaaGNtVVlKps~~tp~t~ 166 (427)
T 1o20_A 90 MIKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR-P-NVTVETTILALKSGNTILLRGGSDALNSN 166 (427)
T ss_dssp HHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC-T-HHHHHHHHHHHHTTCCEEEECCGGGHHHH
T ss_pred HHHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC-h-HHHHHHHHHHHHcCCEEEEECCHhHHHHH
Confidence 99999999988765 3443332 12345688999999999999986 4 68899999999999999999999999999
Q ss_pred HHHHHHHH----HcCCCCCcEEEEeCC-chhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceE
Q 015130 203 LYFAHLAK----LAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (413)
Q Consensus 203 ~~l~~~l~----~aglP~g~i~~v~g~-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~i 277 (413)
.+|++++. ++|+|+|++|+|+|. +.+.++.|..||+++.|+||||+.+|+.|++.+ +||+++|||||||+|
T Consensus 167 ~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~i 242 (427)
T 1o20_A 167 KAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIF 242 (427)
T ss_dssp HHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEE
Confidence 99999998 689999999999984 456788899999999999999999999999876 499999999999999
Q ss_pred EcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHHHHHHHHHHcccCCCCCCCCCcccccCCHHhHHHHHHH
Q 015130 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (413)
Q Consensus 278 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~Gpl~~~~~~~~~~~~ 357 (413)
|++|||+|.|++.+++++|.|+| .|++++|||||++++|+|+++|.+++++++++
T Consensus 243 V~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------ 297 (427)
T 1o20_A 243 VDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------ 297 (427)
T ss_dssp ECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE------------------------
T ss_pred EeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe------------------------
Confidence 99999999999999999999999 99999999999999999999999999988652
Q ss_pred HHHHHHcCCEEEeCCcccCCCCCeEeeEEEEeCCCCCcccccccccceeEEEEecC
Q 015130 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKK 413 (413)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 413 (413)
+.||.+. .| |+ ||| +++++++++||+||||++|++|+|
T Consensus 298 -----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~ 335 (427)
T 1o20_A 298 -----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKN 335 (427)
T ss_dssp -----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESS
T ss_pred -----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECC
Confidence 2233221 13 33 885 345789999999999999999986
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=87.63 E-value=21 Score=34.38 Aligned_cols=169 Identities=18% Similarity=0.189 Sum_probs=100.4
Q ss_pred cCCccceeeeeccceEEEeCCCc---hhHHhhHHHHhhHhhcCCE--EEEecCCCChHHHHHHHHHHHHcCCCCCcEEEE
Q 015130 148 SRALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCT--MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVV 222 (413)
Q Consensus 148 ~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~l~~AL~aGN~--Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v 222 (413)
.+|.....++.|+--|++..|.- ||-.. +...+||-.+|+. |+.-|++. -.....+.-+...+|+. .+.
T Consensus 118 ~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~AA~l~Gv~----eIy 191 (423)
T 4gic_A 118 ADGTLLGQKITPLDRVGLYVPGGKAAYPSSV-LMNAVPAKVAGVPELIMAVPAPR-GELNALVLAAAYISGVD----RVF 191 (423)
T ss_dssp TTSCEEEEEEEECSEEEEECCCSTTCCHHHH-HHHHHHHHHHTCSEEEEECCCGG-GCCCHHHHHHHHHHTCC----EEE
T ss_pred CCCCEEEEEEEEecceeEEeeCCCCchhhHH-HHhhccHHHhCCCeEEEecCCCC-CCccHHHHHHHHhcCCc----EEE
Confidence 45666778899999999999944 77544 5557899999986 33445432 11222333344556653 233
Q ss_pred eCCchhHHHHHHc----CCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceEEc-CCCCHHHHHHHHHHHhcc
Q 015130 223 PGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF-DDVDVNTAADMALLGILF 297 (413)
Q Consensus 223 ~g~~~~~~~~l~~----~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~-~dadl~~a~~~i~~~~~~ 297 (413)
.-.|.+.-.+|.- -|.||.|+=.|..-+... ++.. .+..-+=+.-|-.--+||. +++|.+..+..++..+=+
T Consensus 192 ~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v-~g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEH 268 (423)
T 4gic_A 192 RIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLV-FGQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEH 268 (423)
T ss_dssp CCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHH-BTTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTT
T ss_pred EcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHh-cCCcCcccccccceEEEEeCCCCCHHHHHHHHHHhhcc
Confidence 3235555555543 678999999999887543 2222 1112222222334444444 468999999988887766
Q ss_pred cCCCccccCceeEEecc--hHHHHHHHHHHHHHcc
Q 015130 298 NKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAW 330 (413)
Q Consensus 298 ~~GQ~C~a~~~v~V~~~--i~~~f~~~L~~~~~~~ 330 (413)
... .+.++|..+ +.+++.+.+.+.+..+
T Consensus 269 d~~-----a~~iLvT~s~~la~~V~~~i~~~l~~l 298 (423)
T 4gic_A 269 DED-----AQAILISPDAAHLEAVQASIERLLPGM 298 (423)
T ss_dssp CTT-----CEEEEEESCHHHHHHHHHHHHHHGGGC
T ss_pred CCC-----CeEEEEeCcHHHHHHHHHHHHHHHhhC
Confidence 543 234666544 4555655665555544
No 54
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=68.78 E-value=21 Score=30.14 Aligned_cols=42 Identities=19% Similarity=0.284 Sum_probs=33.6
Q ss_pred hHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015130 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (413)
Q Consensus 182 ~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~ 226 (413)
..-.+||-+|+|-.|-. +..++.++...++|++++-.|.|++
T Consensus 112 sv~~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGDD 153 (180)
T 3v4g_A 112 DVDHNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGDD 153 (180)
T ss_dssp EEEECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECSS
T ss_pred EEeecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecCC
Confidence 33457999999987765 6778888888889999999998854
No 55
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=60.20 E-value=74 Score=26.46 Aligned_cols=42 Identities=19% Similarity=0.303 Sum_probs=32.0
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015130 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (413)
Q Consensus 181 ~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~ 226 (413)
...=.+||-+|+|-.|-. +..++.++...++| +++-.|-|++
T Consensus 106 ~sv~~~~nlvVikT~PG~---A~~vA~~iD~~~~~-eIlGTIAGDD 147 (170)
T 3lap_A 106 VSTDDSGNLAVLRTPPGA---AHYLASAIDRAALP-QVVGTIAGDD 147 (170)
T ss_dssp CEEEEETTEEEEECSTTC---HHHHHHHHHHHTCT-TEEEEEECSS
T ss_pred eEEeecCCEEEEEeCCCc---HHHHHHHHHhCCCC-CeEEEEecCC
Confidence 334457999999987655 67788888888776 7888888854
No 56
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=55.81 E-value=12 Score=32.90 Aligned_cols=68 Identities=10% Similarity=0.137 Sum_probs=46.0
Q ss_pred HHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHH
Q 015130 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252 (413)
Q Consensus 177 ~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~ 252 (413)
+..++..+.+||-||++-+. +-....+..+|... +|.|++++++.+. +- ...-..+.+.++.+...-.
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s~-~Y----~~~~~cnilgls~~v~iP~ 88 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYSS-QY----EEAYRCNFLGLSPHVQIPP 88 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEES-SC----CCTTTCSEEEECTTCCCCH
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccch-hh----cchhheeeecCCCCcccCc
Confidence 45567788899999999876 44555667778887 9999999986522 11 1223456666666655443
No 57
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=51.02 E-value=26 Score=28.66 Aligned_cols=114 Identities=16% Similarity=0.122 Sum_probs=75.1
Q ss_pred ceEEEeCCCch-hHHhhHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhHHHHHHcCC
Q 015130 161 GVVGHIIPWNF-PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTAGAAIASHM 237 (413)
Q Consensus 161 Gvv~~i~p~n~-P~~~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~-aglP~g~i~~v~g-~~~~~~~~l~~~~ 237 (413)
|.|+++..-+. +-...+.+-...++.|..++-- .-|+ +.|.+ .|+|-..++-++. ..+++++. +.+.
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~-I~~g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTG----NLISRATGMNVNAMLSGPMGGDQQVGAL-ISEG 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHH----HHHHHHHCCCCEEECCGGGTHHHHHHHH-HHTT
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHH----HHHHHHhCceeEEEEecCCCCCchHHHH-HHCC
Confidence 76666555444 6666666666777789887752 2344 44555 7999776664443 23345554 4567
Q ss_pred CCCEEEEeCC-------hHHHHHHHHHHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCC
Q 015130 238 DIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300 (413)
Q Consensus 238 ~v~~v~ftGs-------~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~G 300 (413)
.|+.|.||-+ ..-+..|.+.|. .+-.|+..-+ ..++.++.+.+.+..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~-~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLAT-VWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHH-HTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 8999999876 457788999988 6667777543 456777777777754
No 58
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=46.59 E-value=2.1e+02 Score=27.56 Aligned_cols=191 Identities=20% Similarity=0.219 Sum_probs=106.9
Q ss_pred hHHHHHHHHHHHHHhhhhcCeeeeccCCccceeeeeccceEEEeCCC---chhHHhhHHHHhhHhhcCCEEEE--ecCCC
Q 015130 123 IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIV--KPAEQ 197 (413)
Q Consensus 123 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~l~~AL~aGN~Vil--kps~~ 197 (413)
+..+.+.++.|...... .........|.....++.|+--|++..|. -||.. .+...+||-.+|+.=|+ -|+..
T Consensus 88 i~~A~~nI~~fH~~Q~~-~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~i 165 (434)
T 1kae_A 88 MAVAVKNIETFHTAQKL-PPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFST-VLMLATPASIAGCKKVVLCSPPPI 165 (434)
T ss_dssp HHHHHHHHHHHHHTTCC-CCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCTHH-HHHHHHHHHHHTCSEEEEEECSSC
T ss_pred HHHHHHHHHHHHHHhcC-CCceEEecCCcEEEEEEeehheEEEEecCCCCCchhH-HHHhhccHhhcCCCeEEEECCCCC
Confidence 44555556655432211 11122223456677889999999999996 46654 45557899999987554 44422
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHc----CCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEe--CC
Q 015130 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE--LG 271 (413)
Q Consensus 198 ~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~----~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~le--lg 271 (413)
.| .+.-+...+|..+ +..-.|.+.-.+|.- -|.||.|+=.|..-+...=..... . ...|-.. -|
T Consensus 166 ~p----~iL~AA~l~Gv~e----Iy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~-~-~G~VgIDm~AG 235 (434)
T 1kae_A 166 AD----EILYAAQLCGVQD----VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ-R-LDGAAIDMPAG 235 (434)
T ss_dssp CH----HHHHHHHHTTCCE----EEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHH-C-TTSCEESCCCC
T ss_pred CH----HHHHHHHHcCCCE----EeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHh-h-cCccccCCCCC
Confidence 22 2333345566542 222225444444432 588999999999876433111111 1 1222222 23
Q ss_pred CCCceEE-cCCCCHHHHHHHHHHHhcccCCCccccCceeEEecc--hHHHHHHHHHHHHHcc
Q 015130 272 GKSPLLI-FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAW 330 (413)
Q Consensus 272 G~~~~iV-~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~--i~~~f~~~L~~~~~~~ 330 (413)
-.--+|+ +++||.+..+..++..+=+..- .+.++|..+ +.+++.+.+.+.+..+
T Consensus 236 PSEilViAD~tAnp~~vAaDLLsQAEHd~~-----a~aiLvT~s~~la~~V~~ev~~ql~~l 292 (434)
T 1kae_A 236 PSEVLVIADSGATPDFVASDLLSQAEHGPD-----SQVILLTPAADMARRVAEAVERQLAEL 292 (434)
T ss_dssp CCEEEEEECTTSCHHHHHHHHHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHhccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhC
Confidence 3333343 4579999999988887766542 334566443 5566666666555544
No 59
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=43.46 E-value=21 Score=30.04 Aligned_cols=120 Identities=15% Similarity=0.067 Sum_probs=78.5
Q ss_pred eeeecc-ceEEEeCCCch-hHHhhHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhHH
Q 015130 155 TLREPI-GVVGHIIPWNF-PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTAG 230 (413)
Q Consensus 155 ~~~~P~-Gvv~~i~p~n~-P~~~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~-aglP~g~i~~v~g-~~~~~~ 230 (413)
.+.-|. |.|+++..-+. +-...+.+-...++.|..++- +.-|+. .|.+ .|+|-..++-++. ..++++
T Consensus 21 ~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~----~L~e~~Gl~v~~v~k~~eGG~pqI~ 91 (178)
T 1vmd_A 21 KIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGA----LLQEKLGLKVHRLKSGPLGGDQQIG 91 (178)
T ss_dssp EEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHH----HHHHHHCCCCEECSCGGGTHHHHHH
T ss_pred eeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHH----HHHHHhCceeEEEeecCCCCCchHH
Confidence 334443 76666665544 666666667777778998775 344444 4455 7999766654432 233455
Q ss_pred HHHHcCCCCCEEEEeCC-------hHHHHHHHHHHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCC
Q 015130 231 AAIASHMDIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300 (413)
Q Consensus 231 ~~l~~~~~v~~v~ftGs-------~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~G 300 (413)
+ ++....|+.|.||-+ ..-+..|.+.|. .+-.|+..-+ ..++.++.+.+.+..
T Consensus 92 d-~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~-~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 92 A-MIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIAT-VYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp H-HHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHH-HTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred H-HHHCCCccEEEEccCccCCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 4 445678999999876 335788999888 6667777543 567778888877764
No 60
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=41.43 E-value=75 Score=21.02 Aligned_cols=47 Identities=15% Similarity=0.247 Sum_probs=34.7
Q ss_pred CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 015130 56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEA 108 (413)
Q Consensus 56 ~~~~~~~~av~~A~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~ 108 (413)
.+.++.++.+++.-+|-..|.|... .+|+-+...|.+-++.++..+.
T Consensus 5 lt~eq~~aILkaLdeaIe~GPWe~S------NFLRvIGKnL~eIRd~F~~~i~ 51 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEKGPWDKS------NFLRVIGKKLIAIRDRFLKRIG 51 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCTTSC------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCchHH------HHHHHHHHhHHHHHHHHHHHhc
Confidence 3556666666766677666789764 6788888888888888887653
No 61
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=35.68 E-value=33 Score=27.60 Aligned_cols=63 Identities=13% Similarity=0.034 Sum_probs=44.4
Q ss_pred HHHHHHcCCCCCcEEEEeCC-c----hhHHHHHHcCCCCCEEEEeCCh-----HHHHHHHHHHhhCCCcceEEeC
Q 015130 206 AHLAKLAGVPDGVLNVVPGF-G----PTAGAAIASHMDIDKVSFTGST-----DVGRQVMQAAATSNLKPVSLEL 270 (413)
Q Consensus 206 ~~~l~~aglP~g~i~~v~g~-~----~~~~~~l~~~~~v~~v~ftGs~-----~~g~~i~~~~~~~~~~~~~lel 270 (413)
++.|.+.|+|-..++-++.. . +.+.+.+. +..|++|.+|-+. .-+..|.+.+. .+..|++..+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~-~g~i~lVInt~~~~~~~~~d~~~iRR~Av-~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIR-DGSIDLVINLPNNNTKFVHDNYVIRRTAV-DSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHHH-TTSCCEEEECCCCCGGGHHHHHHHHHHHH-HTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHHH-CCCceEEEECCCCCCcCCccHHHHHHHHH-HhCCCeEcCH
Confidence 44567899998877766542 2 45666554 5689999998654 36788888888 6668887654
No 62
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=35.52 E-value=51 Score=25.68 Aligned_cols=83 Identities=11% Similarity=0.113 Sum_probs=48.5
Q ss_pred HHHHHhcccCCCcccc--CceeEEecchHHHHHHHHHHHHHcccCCCCCCCCCcccccCCH----HhHHHHHHHHHHHHH
Q 015130 290 MALLGILFNKGEICVA--SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDK----KQFDRILSYIEHGKR 363 (413)
Q Consensus 290 ~i~~~~~~~~GQ~C~a--~~~v~V~~~i~~~f~~~L~~~~~~~~~g~p~~~~~~~Gpl~~~----~~~~~~~~~i~~a~~ 363 (413)
..+.......+-.|.. ....|++.+.++++.+++.+.+..+.--+|+.++..-.-|.+. -...-+..+|+..++
T Consensus 36 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~~~~ll~~l~~ 115 (135)
T 2v9v_A 36 KLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARVYQALLEEWSR 115 (135)
T ss_dssp HHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHHHHHHHHHHHH
Confidence 3344444344434443 2344899999999999999999986555565544322222111 012234567788888
Q ss_pred cCCEEEeCC
Q 015130 364 EGATLLTGG 372 (413)
Q Consensus 364 ~Ga~v~~gg 372 (413)
+|.-...|+
T Consensus 116 ~g~l~~~~~ 124 (135)
T 2v9v_A 116 EGRLQLAAN 124 (135)
T ss_dssp TTSEEECSS
T ss_pred CCCEEecCC
Confidence 886555444
No 63
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=34.07 E-value=82 Score=21.83 Aligned_cols=57 Identities=9% Similarity=0.102 Sum_probs=40.4
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 015130 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (413)
Q Consensus 186 aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (413)
+||-+|+|-.|-. +..++.++.+.++|. ++-.+-|++. .+...-+...++.+.+...
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGDDT-------------Ilvi~r~~~~a~~l~~~i~ 68 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDDT-------------CLIICRTPKDAKKVSNQLL 68 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECSSE-------------EEEEESSHHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeCCE-------------EEEEECCHHHHHHHHHHHH
Confidence 6999999987655 677888888887776 8998888541 3445556666666665543
No 64
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=33.23 E-value=89 Score=22.16 Aligned_cols=37 Identities=22% Similarity=0.399 Sum_probs=29.3
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015130 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (413)
Q Consensus 186 aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~ 226 (413)
++|-+|+|-.|-. +..++.++.+.++|. ++-.|-|++
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGDD 56 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGDD 56 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECSS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCC
Confidence 7999999987655 677888888887765 888888753
No 65
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=31.20 E-value=63 Score=22.95 Aligned_cols=38 Identities=18% Similarity=0.364 Sum_probs=30.8
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015130 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (413)
Q Consensus 186 aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~ 226 (413)
++|-+|+|-.|-. +..++.++.+.+.+++++-.+-|++
T Consensus 14 ~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGDD 51 (78)
T 1xxa_A 14 NDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGDD 51 (78)
T ss_dssp CSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECSS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecCC
Confidence 6899999987654 6778888887778889999998854
No 66
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=30.92 E-value=66 Score=26.57 Aligned_cols=53 Identities=19% Similarity=0.016 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHH---cCCCCCEEEEeCChHHH
Q 015130 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA---SHMDIDKVSFTGSTDVG 251 (413)
Q Consensus 199 ~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~---~~~~v~~v~ftGs~~~g 251 (413)
-....+|.+.|.+.|+.--...+++.+...+..++. .....|.|..||+...+
T Consensus 39 D~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 39 DESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred cchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 456778999999999876556666654444555543 34678999999998654
No 67
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=30.39 E-value=16 Score=29.26 Aligned_cols=87 Identities=15% Similarity=0.131 Sum_probs=53.2
Q ss_pred hHHhhHHHHhhHhhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEe-CCchhHHHHHHcCCCCCEEEEeCC--
Q 015130 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVP-GFGPTAGAAIASHMDIDKVSFTGS-- 247 (413)
Q Consensus 172 P~~~~~~~l~~AL~aGN~Vilkps~~~~~~~~~l~~~l~~-aglP~g~i~~v~-g~~~~~~~~l~~~~~v~~v~ftGs-- 247 (413)
+-...+.+-...++.|..++- +.-|+ +.|.+ .|++-..++-++ +..+.+++.+ .+..++.|.||-+
T Consensus 16 ~~~v~~a~~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I-~~geIdlVInt~~pl 85 (134)
T 2xw6_A 16 EEMVAFCQRHREVLARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARV-AEGRILAVIFFRDPL 85 (134)
T ss_dssp HHHHHHHHHTHHHHTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHH-HTTCEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCCCcchHHHHH-HCCCccEEEEccCcc
Confidence 334444444455556766554 33444 44445 799987777666 5344555555 5668999999977
Q ss_pred -----hHHHHHHHHHHhhCCCcceEEe
Q 015130 248 -----TDVGRQVMQAAATSNLKPVSLE 269 (413)
Q Consensus 248 -----~~~g~~i~~~~~~~~~~~~~le 269 (413)
..-+..|.+.+. .+-.|+...
T Consensus 86 ~~~~h~~D~~~IrR~A~-~~~IP~~T~ 111 (134)
T 2xw6_A 86 TAQPHEPDVQALLRVCD-VHGVPLATN 111 (134)
T ss_dssp TCCTTSCCSHHHHHHHH-HHTCCEECS
T ss_pred cCCCccchHHHHHHHHH-HcCCCeEcC
Confidence 234577888877 455666643
No 68
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=29.56 E-value=59 Score=26.73 Aligned_cols=52 Identities=17% Similarity=0.199 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcC--CCCCEEEEeCChHHHH
Q 015130 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVGR 252 (413)
Q Consensus 200 ~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~--~~v~~v~ftGs~~~g~ 252 (413)
.....|.+++.+.|...-...+++.+ ..+.+.|.+. ...|.|..||++..+.
T Consensus 27 sn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 27 RCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp CHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 45677888899999876667788776 6666666442 3679999999887643
No 69
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=29.35 E-value=81 Score=22.63 Aligned_cols=56 Identities=11% Similarity=0.082 Sum_probs=39.6
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 015130 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (413)
Q Consensus 186 aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (413)
+||-+|+|-.|-. +..++.++.+.++|. ++-.|-|++. .+...-+...+..+.+..
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGDDT-------------Ilvi~r~~~~a~~l~~~l 79 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGDDT-------------ILIICRTPEDTEGVKNRL 79 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECSSE-------------EEEECSSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCCE-------------EEEEECCHHHHHHHHHHH
Confidence 7999999987655 677888888887765 8888888541 344455556666666554
No 70
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=28.13 E-value=41 Score=27.79 Aligned_cols=54 Identities=22% Similarity=0.183 Sum_probs=36.9
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHc---CCCCCEEEEeCChHHH
Q 015130 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG 251 (413)
Q Consensus 198 ~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~---~~~v~~v~ftGs~~~g 251 (413)
.-.....|.+.+.+.|+..-...+++.+...+.+.|.. ....|.|..||++..+
T Consensus 29 ~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 29 TDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp TCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred ccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 34566778888999998655566676654455555533 2368999999998654
No 71
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=27.52 E-value=86 Score=23.79 Aligned_cols=104 Identities=16% Similarity=0.250 Sum_probs=67.4
Q ss_pred EEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCceeEEecchHHHHH
Q 015130 241 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320 (413)
Q Consensus 241 ~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~ 320 (413)
.|.|...++.-+.|.+... +.+.++ +++..|-|-..--+.+ .-|-..|-. +--.++ .++|.
T Consensus 5 fvvfssdpeilkeivreik-rqgvrv---------vllysdqdekrrrerl--eefekqgvd------vrtved-kedfr 65 (162)
T 2l82_A 5 FVVFSSDPEILKEIVREIK-RQGVRV---------VLLYSDQDEKRRRERL--EEFEKQGVD------VRTVED-KEDFR 65 (162)
T ss_dssp EEEEESCHHHHHHHHHHHH-HTTCEE---------EEEECCSCHHHHHHHH--HHHHTTTCE------EEECCS-HHHHH
T ss_pred EEEecCCHHHHHHHHHHHH-hCCeEE---------EEEecCchHHHHHHHH--HHHHHcCCc------eeeecc-HHHHH
Confidence 4667777777777777776 333444 3455666655444333 335555521 111222 58899
Q ss_pred HHHHHHHHcccCCCCCCCCCcccccCCHHhHHHHHHHHHHHHHcCCEEEe
Q 015130 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370 (413)
Q Consensus 321 ~~L~~~~~~~~~g~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 370 (413)
+.+++...++. ..++--+++.+..+.+++.|++|.+.|..+..
T Consensus 66 enireiweryp-------qldvvvivttddkewikdfieeakergvevfv 108 (162)
T 2l82_A 66 ENIREIWERYP-------QLDVVVIVTTDDKEWIKDFIEEAKERGVEVFV 108 (162)
T ss_dssp HHHHHHHHHCT-------TCCEEEEEECCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhCC-------CCcEEEEEecCcHHHHHHHHHHHHhcCcEEEE
Confidence 99998888762 34455566777889999999999999987653
No 72
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=25.54 E-value=43 Score=26.51 Aligned_cols=43 Identities=14% Similarity=0.053 Sum_probs=30.5
Q ss_pred CcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 015130 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (413)
Q Consensus 217 g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (413)
|.+.+++|+..+......+.+++.++.+||+......+.+.+.
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~ 95 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAE 95 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHH
Confidence 5688887866554444433257889999999887777777766
No 73
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=24.46 E-value=64 Score=27.20 Aligned_cols=54 Identities=19% Similarity=0.055 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcC--CCCCEEEEeCChHHHH
Q 015130 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVGR 252 (413)
Q Consensus 199 ~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~--~~v~~v~ftGs~~~g~ 252 (413)
-.....|.+++.+.|...-...+++.+...+.+.|... ...|.|..||++..+.
T Consensus 48 Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 48 DHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp CSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred CcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 34667788899999876666667776555555555442 4689999999988654
No 74
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=24.02 E-value=79 Score=19.92 Aligned_cols=27 Identities=4% Similarity=0.016 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhC
Q 015130 86 RGIMLKFADLIEEHAEVLAVLEALDAG 112 (413)
Q Consensus 86 ~~~L~~~a~~l~~~~~~l~~~~~~e~G 112 (413)
.++|..+...|.+-++++.+++..|..
T Consensus 14 qEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 14 QELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888888888889999888877654
No 75
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=21.68 E-value=4.4e+02 Score=24.12 Aligned_cols=89 Identities=12% Similarity=0.023 Sum_probs=54.8
Q ss_pred HHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCccccCcee
Q 015130 230 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 309 (413)
Q Consensus 230 ~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v 309 (413)
.+.|+.++++|.|.....+..-..+...+. +..|.|+.|-. + ..+++.+- .++..+- .+|. .+
T Consensus 80 ~~~ll~~~~vD~V~I~tp~~~H~~~~~~al-~aGkhVl~EKP----l----a~~~~ea~-~l~~~a~-~~g~------~l 142 (361)
T 3u3x_A 80 AEEILEDENIGLIVSAAVSSERAELAIRAM-QHGKDVLVDKP----G----MTSFDQLA-KLRRVQA-ETGR------IF 142 (361)
T ss_dssp HHHHHTCTTCCEEEECCCHHHHHHHHHHHH-HTTCEEEEESC----S----CSSHHHHH-HHHHHHH-TTCC------CE
T ss_pred HHHHhcCCCCCEEEEeCChHHHHHHHHHHH-HCCCeEEEeCC----C----CCCHHHHH-HHHHHHH-HcCC------EE
Confidence 356778889999999999988888887777 45577766632 1 22455543 3433332 2332 23
Q ss_pred EE-ecchHH-HHHHHHHHHHHcccCCCC
Q 015130 310 YV-QEGIYD-EFEKKLVEKAKAWVVGDP 335 (413)
Q Consensus 310 ~V-~~~i~~-~f~~~L~~~~~~~~~g~p 335 (413)
.| +...++ ....++++.+.+=.+|.+
T Consensus 143 ~v~~~~R~~~p~~~~~k~~i~~g~iG~i 170 (361)
T 3u3x_A 143 SILYSEHFESPATVKAGELVAAGAIGEV 170 (361)
T ss_dssp EEECHHHHTCHHHHHHHHHHHTTTTSSE
T ss_pred EEechHhhCCHHHHHHHHHHHcCCCCCe
Confidence 33 344564 777788888876455553
No 76
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=20.08 E-value=1.2e+02 Score=27.05 Aligned_cols=33 Identities=27% Similarity=0.503 Sum_probs=24.0
Q ss_pred eEcCe-EeeCCCCCeEEeecCCCCceEEEEeCCC
Q 015130 25 FINGE-FVDSVSGKTFETIDPRTGEAIARIAEGD 57 (413)
Q Consensus 25 ~I~G~-~~~~~~~~~~~~~~P~tg~~i~~v~~~~ 57 (413)
+++|+ |+.......+.++||.||+++..+....
T Consensus 179 ~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~ 212 (262)
T 3nol_A 179 WVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNG 212 (262)
T ss_dssp EETTEEEEEETTSSEEEEECTTTCBEEEEEECTT
T ss_pred EECCEEEEEEccCCeEEEEECCCCcEEEEEECCc
Confidence 45555 3333345688999999999999998764
No 77
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=20.05 E-value=1.6e+02 Score=23.77 Aligned_cols=57 Identities=9% Similarity=0.112 Sum_probs=40.6
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 015130 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (413)
Q Consensus 185 ~aGN~Vilkps~~~~~~~~~l~~~l~~aglP~g~i~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (413)
.+||-+|+|-.|-. +..++.++...++|. ++-.|.|++. .+..+-+...+..+.+..
T Consensus 89 ~~~n~vVikT~PG~---A~~va~~iD~~~~~e-IlGTIAGDDT-------------Ilvi~r~~~~a~~l~~~l 145 (149)
T 1b4a_A 89 GTGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDDT-------------CLIICRTPKDAKKVSNQL 145 (149)
T ss_dssp EETTEEEEEESTTC---HHHHHHHHHHHTCTT-EEEEEECSSE-------------EEEEESSHHHHHHHHHHH
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCCE-------------EEEEeCCHHHHHHHHHHH
Confidence 37999999987655 677888888887776 8998888541 344555566666666554
Done!