BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015135
(412 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/253 (48%), Positives = 157/253 (62%), Gaps = 34/253 (13%)
Query: 106 PKFGMTSVCGRRRDMEDTVSIHPSFCK-------------QNCAHFYGVFDGHGCSHVAM 152
P +G TS+CGRR +MED VS P F + Q+ AHF+GV+DGHG S VA
Sbjct: 12 PLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVAN 71
Query: 153 KCKDRLHDILREEIES-----CNVVEESVKWKQTMQASFGKMDKEVQDWSVSSKISNCRC 207
C++R+H L EEI C+ KWK+ + SF ++D E++ SV+
Sbjct: 72 YCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIE--SVAP------- 122
Query: 208 ELQTPQCDAVGSXXXXXXXXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRI 267
+ VGS P + V+NCGDSRAVLCR A+PLS DHKPDR DE RI
Sbjct: 123 -------ETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARI 175
Query: 268 EAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLW 327
EAAGG+VI W+G RV GVLAMSR+IGD YLKP +I +PEVT +R ED+CLILASDG+W
Sbjct: 176 EAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVW 235
Query: 328 DVVSNETACSVVR 340
DV+++E AC + R
Sbjct: 236 DVMTDEEACEMAR 248
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/253 (48%), Positives = 157/253 (62%), Gaps = 34/253 (13%)
Query: 106 PKFGMTSVCGRRRDMEDTVSIHPSFCK-------------QNCAHFYGVFDGHGCSHVAM 152
P +G TS+CGRR +MED VS P F + Q+ AHF+GV+DGHG S VA
Sbjct: 24 PLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVAN 83
Query: 153 KCKDRLHDILREEIES-----CNVVEESVKWKQTMQASFGKMDKEVQDWSVSSKISNCRC 207
C++R+H L EEI C+ KWK+ + SF ++D E++ SV+
Sbjct: 84 YCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIE--SVAP------- 134
Query: 208 ELQTPQCDAVGSXXXXXXXXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRI 267
+ VGS P + V+NCGDSRAVLCR A+PLS DHKPDR DE RI
Sbjct: 135 -------ETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARI 187
Query: 268 EAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLW 327
EAAGG+VI W+G RV GVLAMSR+IGD YLKP +I +PEVT +R ED+CLILASDG+W
Sbjct: 188 EAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVW 247
Query: 328 DVVSNETACSVVR 340
DV+++E AC + R
Sbjct: 248 DVMTDEEACEMAR 260
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 234 bits (597), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 123/253 (48%), Positives = 158/253 (62%), Gaps = 34/253 (13%)
Query: 106 PKFGMTSVCGRRRDMEDTVSIHPSFCK-------------QNCAHFYGVFDGHGCSHVAM 152
P +G TS+CGRR +MED VS P F + Q+ AHF+GV+DGHG S VA
Sbjct: 9 PLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVAN 68
Query: 153 KCKDRLHDILREEI--ESCNVVEESV---KWKQTMQASFGKMDKEVQDWSVSSKISNCRC 207
C++R+H L EEI E + + KWK+ + SF ++D E++ SV+
Sbjct: 69 YCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIE--SVAP------- 119
Query: 208 ELQTPQCDAVGSXXXXXXXXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRI 267
+ VGS P + V+NCGDSRAVLCR A+PLS DHKPDR DE RI
Sbjct: 120 -------ETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARI 172
Query: 268 EAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLW 327
EAAGG+VI W+G RV GVLAMSR+IGD YLKP +I +PEVT +R ED+CLILASDG+W
Sbjct: 173 EAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVW 232
Query: 328 DVVSNETACSVVR 340
DV+++E AC + R
Sbjct: 233 DVMTDEEACEMAR 245
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 167/302 (55%), Gaps = 38/302 (12%)
Query: 106 PKFGMTSVCGRRRDMEDTVSIHPSFCKQNC-----------------AHFYGVFDGHGCS 148
P +G+TS+CGRR +MED+VS P F + + AHF+GV+DGHG S
Sbjct: 12 PLYGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGGS 71
Query: 149 HVAMKCKDRLHDILREEI-----ESCNVVEESVKWKQTMQASFGKMDKEVQDWSVSSKIS 203
VA C++R+H L EEI E C+ KWK+ + SF ++D E++ +
Sbjct: 72 QVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSEIETVA------ 125
Query: 204 NCRCELQTPQCDAVGSXXXXXXXXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDE 263
P+ VGS P + V+NCGDSRAVLCR + LS DHKPDR DE
Sbjct: 126 ------HAPE--TVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDE 177
Query: 264 LLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILAS 323
RIEAAGG+VI W+G RV GVLAMSR+IGD YLKP VI +PEVT R ED+CLILAS
Sbjct: 178 AARIEAAGGKVIRWNGARVFGVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILAS 237
Query: 324 DGLWDVVSNETACSVVRTCFRAQKXXXXXXXXXXXXXXXXXXXQSSDKACLDASILLTKL 383
DGLWDV++NE C + R R + D A + A+ L+K+
Sbjct: 238 DGLWDVMTNEEVCDLARK--RILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSKM 295
Query: 384 AL 385
AL
Sbjct: 296 AL 297
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 148/261 (56%), Gaps = 26/261 (9%)
Query: 106 PKFGMTSVCGRRRDMEDTVSIHPSFCK------------------QNCAHFYGVFDGHGC 147
P +G S+ G R +MED ++ P F K HF+GV+DGHG
Sbjct: 17 PLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGG 76
Query: 148 SHVAMKCKDRLHDILREEIESC-------NVVE-ESVKWKQTMQASFGKMDKEVQDWSVS 199
VA C+DRLH L EEIE N E V+W + + F +D E++
Sbjct: 77 HKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGR 136
Query: 200 SKISNCRCELQTPQCDAVGSXXXXXXXXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPD 259
+ + + L+ + VGS ++VSNCGDSRAVL R A+PLS DHKPD
Sbjct: 137 AVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPD 196
Query: 260 RPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECL 319
R DE RIE AGG+VI W G RV GVLAMSR+IGD YLKPYVI EPEVT R+ EDECL
Sbjct: 197 REDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECL 256
Query: 320 ILASDGLWDVVSNETACSVVR 340
ILASDGLWDV++N+ C + R
Sbjct: 257 ILASDGLWDVMNNQEVCEIAR 277
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 148/261 (56%), Gaps = 26/261 (9%)
Query: 106 PKFGMTSVCGRRRDMEDTVSIHPSFCK------------------QNCAHFYGVFDGHGC 147
P +G S+ G R +MED ++ P F K HF+GV+DGHG
Sbjct: 20 PLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGG 79
Query: 148 SHVAMKCKDRLHDILREEIESC-------NVVE-ESVKWKQTMQASFGKMDKEVQDWSVS 199
VA C+DRLH L EEIE N E V+W + + F +D E++
Sbjct: 80 HKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGR 139
Query: 200 SKISNCRCELQTPQCDAVGSXXXXXXXXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPD 259
+ + + L+ + VGS ++VSNCGDSRAVL R A+PLS DHKPD
Sbjct: 140 AVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPD 199
Query: 260 RPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECL 319
R DE RIE AGG+VI W G RV GVLAMSR+IGD YLKPYVI EPEVT R+ EDECL
Sbjct: 200 REDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECL 259
Query: 320 ILASDGLWDVVSNETACSVVR 340
ILASDGLWDV++N+ C + R
Sbjct: 260 ILASDGLWDVMNNQEVCEIAR 280
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 148/261 (56%), Gaps = 26/261 (9%)
Query: 106 PKFGMTSVCGRRRDMEDTVSIHPSFCK------------------QNCAHFYGVFDGHGC 147
P +G S+ G R +MED ++ P F K HF+GV+DGHG
Sbjct: 14 PLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGG 73
Query: 148 SHVAMKCKDRLHDILREEIESC-------NVVE-ESVKWKQTMQASFGKMDKEVQDWSVS 199
VA C+DRLH L EEIE N E V+W + + F +D E++
Sbjct: 74 HKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGR 133
Query: 200 SKISNCRCELQTPQCDAVGSXXXXXXXXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPD 259
+ + + L+ + VGS ++VSNCGDSRAVL R A+PLS DHKPD
Sbjct: 134 AVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPD 193
Query: 260 RPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECL 319
R DE RIE AGG+VI W G RV GVLAMSR+IGD YLKPYVI EPEVT R+ EDECL
Sbjct: 194 REDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECL 253
Query: 320 ILASDGLWDVVSNETACSVVR 340
ILASDGLWDV++N+ C + R
Sbjct: 254 ILASDGLWDVMNNQEVCEIAR 274
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 148/261 (56%), Gaps = 26/261 (9%)
Query: 106 PKFGMTSVCGRRRDMEDTVSIHPSFCK------------------QNCAHFYGVFDGHGC 147
P +G S+ G R +MED ++ P F K HF+GV+DGHG
Sbjct: 18 PLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGG 77
Query: 148 SHVAMKCKDRLHDILREEIESC-------NVVE-ESVKWKQTMQASFGKMDKEVQDWSVS 199
VA C+DRLH L EEIE N E V+W + + F +D E++
Sbjct: 78 HKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGR 137
Query: 200 SKISNCRCELQTPQCDAVGSXXXXXXXXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPD 259
+ + + L+ + VGS ++VSNCGDSRAVL R A+PLS DHKPD
Sbjct: 138 AVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPD 197
Query: 260 RPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECL 319
R DE RIE AGG+VI W G RV GVLAMSR+IGD YLKPYVI EPEVT R+ EDECL
Sbjct: 198 REDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECL 257
Query: 320 ILASDGLWDVVSNETACSVVR 340
ILASDGLWDV++N+ C + R
Sbjct: 258 ILASDGLWDVMNNQEVCEIAR 278
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 148/261 (56%), Gaps = 26/261 (9%)
Query: 106 PKFGMTSVCGRRRDMEDTVSIHPSFCK------------------QNCAHFYGVFDGHGC 147
P +G S+ G R +MED ++ P F K HF+GV+DGHG
Sbjct: 27 PLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGG 86
Query: 148 SHVAMKCKDRLHDILREEIESC-------NVVE-ESVKWKQTMQASFGKMDKEVQDWSVS 199
VA C+DRLH L EEIE N E V+W + + F +D E++
Sbjct: 87 HKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGR 146
Query: 200 SKISNCRCELQTPQCDAVGSXXXXXXXXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPD 259
+ + + L+ + VGS ++VSNCGDSRAVL R A+PLS DHKPD
Sbjct: 147 AVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPD 206
Query: 260 RPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECL 319
R DE RIE AGG+VI W G RV GVLAMSR+IGD YLKPYVI EPEVT R+ EDECL
Sbjct: 207 REDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECL 266
Query: 320 ILASDGLWDVVSNETACSVVR 340
ILASDGLWDV++N+ C + R
Sbjct: 267 ILASDGLWDVMNNQEVCEIAR 287
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 148/261 (56%), Gaps = 26/261 (9%)
Query: 106 PKFGMTSVCGRRRDMEDTVSIHPSFCK------------------QNCAHFYGVFDGHGC 147
P +G S+ G R +MED ++ P F K HF+GV+DGHG
Sbjct: 3 PLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGG 62
Query: 148 SHVAMKCKDRLHDILREEIESC-------NVVE-ESVKWKQTMQASFGKMDKEVQDWSVS 199
VA C+DRLH L EEIE N E V+W + + F +D E++
Sbjct: 63 HKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGR 122
Query: 200 SKISNCRCELQTPQCDAVGSXXXXXXXXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPD 259
+ + + L+ + VGS ++VSNCGDSRAVL R A+PLS DHKPD
Sbjct: 123 AVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPD 182
Query: 260 RPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECL 319
R DE RIE AGG+VI W G RV GVLAMSR+IGD YLKPYVI EPEVT R+ EDECL
Sbjct: 183 REDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECL 242
Query: 320 ILASDGLWDVVSNETACSVVR 340
ILASDGLWDV++N+ C + R
Sbjct: 243 ILASDGLWDVMNNQEVCEIAR 263
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 130/253 (51%), Gaps = 33/253 (13%)
Query: 107 KFGMTSVCGRRRDMED--TVSIHPSFCKQNCAHFYGVFDGHGCSHVAMKCKDRL------ 158
++G++S+ G R +MED T + ++ + F+ V+DGH S VA C L
Sbjct: 25 RYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWS-FFAVYDGHAGSRVANYCSTHLLEHITT 83
Query: 159 HDILREEIESCNVVEESVK-WKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAV 217
++ R +S + +E SV+ K ++ F K+D+ ++++S +L+ D
Sbjct: 84 NEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFS----------DLRNGM-DRS 132
Query: 218 GSXXXXXXXXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYW 277
GS P+ + NCGDSRAVL RNG + DHKP P E RI+ AGG V+
Sbjct: 133 GSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI- 191
Query: 278 DGPRVLGVLAMSRAIGDNYLK---------PYVISEPEVTVTERTAEDECLILASDGLWD 328
RV G LA+SRA+GD K V EPEV R EDE +ILA DG+WD
Sbjct: 192 --QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILAXDGIWD 249
Query: 329 VVSNETACSVVRT 341
V+SNE C V++
Sbjct: 250 VMSNEELCEYVKS 262
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 118/250 (47%), Gaps = 31/250 (12%)
Query: 107 KFGMTSVCGRRRDMEDT---VSIHPSFCKQNCAHFYGVFDGHGCSHVAMKCKDRLHDIL- 162
++G++S+ G R +MED V PS + F+ V+DGH S VA C + L D +
Sbjct: 23 RYGLSSMQGWRVEMEDAHTAVIGLPSGLES--WSFFAVYDGHAGSQVAKYCCEHLLDHIT 80
Query: 163 -REEIESCNVVEESVKWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXX 221
++ + K ++ F ++D+ ++ S D GS
Sbjct: 81 NNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKH-----------GADRSGSTA 129
Query: 222 XXXXXXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPR 281
P+ NCGDSR +LCRN + DHKP P E RI+ AGG V+ R
Sbjct: 130 VGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI---QR 186
Query: 282 VLGVLAMSRAIGDNYLK---------PYVISEPEVTVTERTAE-DECLILASDGLWDVVS 331
V G LA+SRA+GD K V EPEV ER+ E D+ +ILA DG+WDV+
Sbjct: 187 VNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMG 246
Query: 332 NETACSVVRT 341
NE C VR+
Sbjct: 247 NEELCDFVRS 256
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 118/250 (47%), Gaps = 31/250 (12%)
Query: 107 KFGMTSVCGRRRDMEDT---VSIHPSFCKQNCAHFYGVFDGHGCSHVAMKCKDRLHDIL- 162
++G++S+ G R +MED V PS + F+ V+DGH S VA C + L D +
Sbjct: 23 RYGLSSMQGWRVEMEDAHTAVIGLPSGLES--WSFFAVYDGHAGSQVAKYCCEHLLDHIT 80
Query: 163 -REEIESCNVVEESVKWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXX 221
++ + K ++ F ++D+ ++ S D GS
Sbjct: 81 NNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKH-----------GADRSGSTA 129
Query: 222 XXXXXXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPR 281
P+ NCGDSR +LCRN + DHKP P E RI+ AGG V+ R
Sbjct: 130 VGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI---QR 186
Query: 282 VLGVLAMSRAIGDNYLK---------PYVISEPEVTVTERTAE-DECLILASDGLWDVVS 331
V G LA+SRA+GD K V EPEV ER+ E D+ +ILA DG+WDV+
Sbjct: 187 VNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMG 246
Query: 332 NETACSVVRT 341
NE C VR+
Sbjct: 247 NEELCDFVRS 256
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 121/251 (48%), Gaps = 35/251 (13%)
Query: 109 GMTSVCGRRRDMEDTVSIHPSFCKQNCAHFYGVFDGHGCSHVAMKCKDRLHDILREEIES 168
G +S+ G R ED + +F Q C+ F+ V+DGHG + VA C L L+ +E+
Sbjct: 26 GSSSMQGWRISQEDAHNCILNFDDQ-CS-FFAVYDGHGGAEVAQYCSLHLPTFLKT-VEA 82
Query: 169 CNVVEESVKWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGS--------- 219
E +++ ++ +F D + V EL+ D+ GS
Sbjct: 83 YGRKE----FEKALKEAFLGFDATLLQEKVIE-------ELKVLSGDSAGSDAEPGKDSG 131
Query: 220 -XXXXXXXXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWD 278
+ L V+N GDSR V+CRNG A+ +S DHKP+ E RIE AGGRV D
Sbjct: 132 CTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRIEKAGGRVT-LD 190
Query: 279 GPRVLGVLAMSRAIGDNYLK---------PYVISEPEVTVTERTAEDECLILASDGLWDV 329
G RV G L +SRAIGD+ K + + P++ EDE ++LA DG+W+
Sbjct: 191 G-RVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNF 249
Query: 330 VSNETACSVVR 340
+++E V+
Sbjct: 250 MTSEQVVQFVQ 260
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 119/242 (49%), Gaps = 29/242 (11%)
Query: 109 GMTSVCGRRRDMEDTVSIHPSFCK-QNCAHFYGVFDGHGCSHVAMKCKDRLHDILREEIE 167
G S G+R++ ED F + + ++ V+DGHG A D +E
Sbjct: 125 GCASQIGKRKENEDRFD----FAQLTDEVLYFAVYDGHGGPAAA--------DFCHTHME 172
Query: 168 SC--NVVEESVKWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXX 225
C +++ + + + +F ++DK +S +++S L + V
Sbjct: 173 KCIMDLLPKEKNLETLLTLAFLEIDKA---FSSHARLSADATLLTSGTTATVALLRDGI- 228
Query: 226 XXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDG---PRV 282
+L+V++ GDSRA+LCR G + L+ DH P+R DE RI+ GG + W+ P V
Sbjct: 229 ----ELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGG-FVAWNSLGQPHV 283
Query: 283 LGVLAMSRAIGDNYLKPY-VISEPEVT-VTERTAEDECLILASDGLWDVVSNETACSVVR 340
G LAM+R+IGD LK VI+EPE + A+D L+L +DG+ +V+++ C V
Sbjct: 284 NGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVN 343
Query: 341 TC 342
C
Sbjct: 344 QC 345
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 29/242 (11%)
Query: 109 GMTSVCGRRRDMEDTVSIHPSFCK-QNCAHFYGVFDGHGCSHVAMKCKDRLHDILREEIE 167
G S G+R++ ED F + + ++ V+DGHG A D +E
Sbjct: 11 GCASQIGKRKENEDRFD----FAQLTDEVLYFAVYDGHGGPAAA--------DFCHTHME 58
Query: 168 SC--NVVEESVKWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXX 225
C +++ + + + +F ++DK S+ R + +
Sbjct: 59 KCIMDLLPKEKNLETLLTLAFLEIDKAFS--------SHARLSADATLLTSGTTATVALL 110
Query: 226 XXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDG---PRV 282
+L+V++ GDSRA+LCR G + L+ DH P+R DE RI+ GG + W+ P V
Sbjct: 111 RDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGG-FVAWNSLGQPHV 169
Query: 283 LGVLAMSRAIGDNYLKPY-VISEPEVT-VTERTAEDECLILASDGLWDVVSNETACSVVR 340
G LAM+R+IGD LK VI+EPE + A+D L+L +DG+ +V+++ C V
Sbjct: 170 NGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVN 229
Query: 341 TC 342
C
Sbjct: 230 QC 231
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 108/260 (41%), Gaps = 44/260 (16%)
Query: 114 CGRRRDMEDTVSIHPSFC--KQNCAHFYGVFDGHGCSHVAMKCKDRLHDILREEIESCNV 171
G R+ ED ++ P + +CA F+GVFDG + KD ++ + I S
Sbjct: 30 IGGRKHQEDRFTLCPQLVPGRDDCA-FFGVFDGTVGDFASENVKDL---VVPQLISSPAW 85
Query: 172 VEESVKWKQTMQASFGKMDK---EVQDWSVSSKISNCRCEL----QTPQCDAVGSXXXXX 224
E + + + A+ ++D+ ++ D +V N EL + D S
Sbjct: 86 QEVTEXLRSDVPAT--EVDEKLPQLLDQAVDDXYKNADNELVKXCEQLNKDYASSTSVTA 143
Query: 225 XXXPEKLIVSNCGDSRAVLCRNGVAVP-------LSNDHKPDRPDELLRIEAAGGRVIYW 277
+ V + GDSR GV P L+ DHKPD P E LRI GG V Y
Sbjct: 144 VLAKGFVAVGHLGDSR---IAXGVETPNGLNCEFLTVDHKPDXPHEKLRIXRNGGSVEYL 200
Query: 278 ----DGPRVLG--------------VLAMSRAIGDNYLKPYVIS-EPEVTVTERTAEDEC 318
+ P + G L SRA G LK Y +S +P+V V T +
Sbjct: 201 HNHNNKPFIRGGDFSFRKSRGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQHRV 260
Query: 319 LILASDGLWDVVSNETACSV 338
ILA+DGLWDV S A +
Sbjct: 261 XILATDGLWDVXSAAQAVEI 280
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 235 NCGDSRAVLCR-NGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIG 293
N GDSRA L +G LS DHKP+ P E RIE AGG V +D PRV GVLA+SRA G
Sbjct: 179 NIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLALSRAFG 238
Query: 294 DNYLK 298
D+ K
Sbjct: 239 DSDFK 243
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 66/155 (42%), Gaps = 51/155 (32%)
Query: 231 LIVSNCGDSRAVLCRNGV--------AVPLSNDHKPDRPDELLRIEAAGGR-----VIYW 277
L V+N GDSRA+L GV AV LSNDH EL R++ + V+
Sbjct: 213 LHVANTGDSRAML---GVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQ 269
Query: 278 DGPRVLGVLAMSRAIGDNYLK---------------------------------PYVISE 304
D R+LG+L RA GD K PY+ +E
Sbjct: 270 D--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAE 327
Query: 305 PEVTVTERTAEDECLILASDGLWDVVSNETACSVV 339
PEVT +D+ L+LA+DGLW+ + + +V
Sbjct: 328 PEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 362
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 68/155 (43%), Gaps = 51/155 (32%)
Query: 231 LIVSNCGDSRAVLCRNGV--------AVPLSNDH--KPDRPDELLRIEAAGGR---VIYW 277
L V+N GDSRA+L GV AV LSNDH + +R E L++E V+
Sbjct: 213 LHVANTGDSRAML---GVQEEDGSWSAVTLSNDHNAQNEREVERLKLEHPKNEAKSVVKQ 269
Query: 278 DGPRVLGVLAMSRAIGD---------------------------------NYLKPYVISE 304
D R+LG+L RA GD Y PY+ +E
Sbjct: 270 D--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYYTPPYLTAE 327
Query: 305 PEVTVTERTAEDECLILASDGLWDVVSNETACSVV 339
PEVT +D+ L+LA+DGLW+ + + +V
Sbjct: 328 PEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 362
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 45/254 (17%)
Query: 130 FCKQNCAHFYGVFDGHGCSHVAMKCKDRLHDILREEIESCNVVEESVKWKQTMQASFGKM 189
F +N YGVF+G+ + V RL L + N ++ + +F +
Sbjct: 58 FRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELL--LGQLNAEHAEADVRRVLLQAFDVV 115
Query: 190 DK---EVQDWSVSSKISNCRCELQTPQCD-AVGSXXXXXXXXPEKLIVSNCGDSRAVLCR 245
++ E D +++ K S L+T + + + G+ KL V+N G +RA+LC+
Sbjct: 116 ERSFLESIDDALAEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCK 175
Query: 246 NGV----AVPLSNDHKPDRPDELLRIEAAG---GRVIYWDGPRVLGVL---AMSRAIGDN 295
+ V L+ DH + DEL R+ G G++ + +G++ +R IGD
Sbjct: 176 STVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKI------KQVGIICGQESTRRIGDY 229
Query: 296 YLK--------------PYVISEPEVTVTE-RTAEDECLILASDGLWDVV--------SN 332
+K +I+EPE+ + L+L S+GL+ + +N
Sbjct: 230 KVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQAN 289
Query: 333 ETACSVVRTCFRAQ 346
+ +++ T F Q
Sbjct: 290 QEIAAMIDTEFAKQ 303
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 111/271 (40%), Gaps = 60/271 (22%)
Query: 130 FCKQNCAHFYGVFDGHGCSHVAMKCKDRLH---------------DILREEIESCNVVE- 173
F +N YGVF+G+ + V RL D+ R +++ +VVE
Sbjct: 58 FRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVER 117
Query: 174 ---ESVKWKQTMQASF-GKMDKEVQDWSVSSKISNCRCELQTPQCD-AVGSXXXXXXXXP 228
ES+ +AS ++ + V + + L+T + + + G+
Sbjct: 118 SFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLN 177
Query: 229 EKLIVSNCGDSRAVLCRNGV----AVPLSNDHKPDRPDELLRIEAAG---GRVIYWDGPR 281
KL V+N G +RA+LC++ V L+ DH + DEL R+ G G++ +
Sbjct: 178 NKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKI------K 231
Query: 282 VLGVL---AMSRAIGDNYLK--------------PYVISEPEVTVTERT-AEDECLILAS 323
+G++ +R IGD +K +I+EPE+ + L+L S
Sbjct: 232 QVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMS 291
Query: 324 DGLWDVV--------SNETACSVVRTCFRAQ 346
+GL+ + +N+ +++ T F Q
Sbjct: 292 EGLYKALEAAHGPGQANQEIAAMIDTEFAKQ 322
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 111/271 (40%), Gaps = 60/271 (22%)
Query: 130 FCKQNCAHFYGVFDGHGCSHVAMKCKDRLH---------------DILREEIESCNVVE- 173
F +N YGVF+G+ + V RL D+ R +++ +VVE
Sbjct: 56 FRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVER 115
Query: 174 ---ESVKWKQTMQASF-GKMDKEVQDWSVSSKISNCRCELQTPQCD-AVGSXXXXXXXXP 228
ES+ +AS ++ + V + + L+T + + + G+
Sbjct: 116 SFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLN 175
Query: 229 EKLIVSNCGDSRAVLCRNGV----AVPLSNDHKPDRPDELLRIEAAG---GRVIYWDGPR 281
KL V+N G +RA+LC++ V L+ DH + DEL R+ G G++ +
Sbjct: 176 NKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKI------K 229
Query: 282 VLGVL---AMSRAIGDNYLK--------------PYVISEPEVTVTERT-AEDECLILAS 323
+G++ +R IGD +K +I+EPE+ + L+L S
Sbjct: 230 QVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMS 289
Query: 324 DGLWDVV--------SNETACSVVRTCFRAQ 346
+GL+ + +N+ +++ T F Q
Sbjct: 290 EGLYKALEAAHGPGQANQEIAAMIDTEFAKQ 320
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|B Chain B, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|C Chain C, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|D Chain D, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
Length = 377
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 233 VSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVL-GVLAMSRA 291
V++ G+SR VL A+ LS H E R++AAGG +G +L GV+ +RA
Sbjct: 170 VASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPXTRA 229
Query: 292 IG 293
G
Sbjct: 230 FG 231
>pdb|2CM1|A Chain A, Crystal Structure Of The Catalytic Domain Of Serine
Threonine Protein Phosphatase Pstp In Complex With 2
Manganese Ions
Length = 260
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 17/149 (11%)
Query: 186 FGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPEKLIVSNCGDSRAVLCR 245
K+D V+ + +S I+ + E++ P + +G+ +L + + GDSR L R
Sbjct: 90 LAKLDAAVR--AGNSAIA-AQVEME-PDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLR 145
Query: 246 NGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEP 305
+G ++ D D ++ GR+ + + RA+ + + EP
Sbjct: 146 DGELTQITKD------DTFVQTLVDEGRITPEEAHSHPQRSLIMRALTGHEV------EP 193
Query: 306 EVTVTERTAEDECLILASDGLWDVVSNET 334
+T+ E A D L L SDGL D VS+ET
Sbjct: 194 TLTMREARAGDRYL-LCSDGLSDPVSDET 221
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 86/234 (36%), Gaps = 44/234 (18%)
Query: 134 NCAHFYGVFDGHGCSHVAMKC-KDRLHDILREEIESCNVVEESVKWKQTMQASFGKMDKE 192
N Y + GH VA ++ ++L ++ CN +E+VK + ++ SF ++K
Sbjct: 48 NNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNVCNT-DEAVK--ELIRQSFMSVEKG 104
Query: 193 VQD-----------------------WSVSSKISNCRCELQT-PQCDAVGSXXXXXXXXP 228
D + +S + N +L + +VGS
Sbjct: 105 YFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHR 164
Query: 229 EKLIVSNCGDSRAVLCRNG-----VAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVL 283
L + N G+ RA+LC+ LS DH +E R+ G ++G +
Sbjct: 165 SHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNFEGVPLY 224
Query: 284 GVLAMSRAIGD------NYLKPY----VISEPEVT-VTERTAEDECLILASDGL 326
+ +G N+L VI EPE+ + T L+L S GL
Sbjct: 225 STRCIGNYLGKAGYKDCNFLSSATAEPVIFEPEIVGGIQITPACRFLVLMSSGL 278
>pdb|1TXO|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
SerineTHREONINE PHOSPHATASE PSTPPPP AT 1.95 A.
pdb|1TXO|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
SerineTHREONINE PHOSPHATASE PSTPPPP AT 1.95 A
Length = 237
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 13/123 (10%)
Query: 212 PQCDAVGSXXXXXXXXPEKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAG 271
P + G+ +L + + GDSR L R+G ++ D D ++
Sbjct: 89 PDLEGXGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKD------DTFVQTLVDE 142
Query: 272 GRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVS 331
GR+ + + RA+ + + EP +T E A D L L SDGL D VS
Sbjct: 143 GRITPEEAHSHPQRSLIXRALTGHEV------EPTLTXREARAGDRYL-LCSDGLSDPVS 195
Query: 332 NET 334
+ET
Sbjct: 196 DET 198
>pdb|1OED|C Chain C, Structure Of Acetylcholine Receptor Pore From Electron
Images
Length = 260
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 144 GHGCSHVAMKCKDRLHDILREEIESCNVVEESVKWKQTMQASFGKMDKEVQDWS-VSSKI 202
G G ++ + D+LHD ++ I+S N + + +K K D+EV +W+ V I
Sbjct: 177 GFGNNNENIAASDQLHDEIKSGIDSTNYIVKQIKEKNA-------YDEEVGNWNLVGQTI 229
Query: 203 SNCRCELQTP 212
+ TP
Sbjct: 230 DRLSMFIITP 239
>pdb|4AQ5|C Chain C, Gating Movement In Acetylcholine Receptor Analysed By
Time- Resolved Electron Cryo-Microscopy (Closed Class)
pdb|4AQ9|C Chain C, Gating Movement In Acetylcholine Receptor Analysed By
Time-Resolved Electron Cryo-Microscopy (Open Class)
Length = 522
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 144 GHGCSHVAMKCKDRLHDILREEIESCNVVEESVKWKQTMQASFGKMDKEVQDWS-VSSKI 202
G G ++ + D+LHD ++ I+S N + + +K K D+EV +W+ V I
Sbjct: 422 GFGNNNENIAASDQLHDEIKSGIDSTNYIVKQIKEKNA-------YDEEVGNWNLVGQTI 474
Query: 203 SNCRCELQTP 212
+ TP
Sbjct: 475 DRLSMFIITP 484
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.131 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,002,748
Number of Sequences: 62578
Number of extensions: 365427
Number of successful extensions: 776
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 695
Number of HSP's gapped (non-prelim): 37
length of query: 412
length of database: 14,973,337
effective HSP length: 101
effective length of query: 311
effective length of database: 8,652,959
effective search space: 2691070249
effective search space used: 2691070249
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)