Query 015136
Match_columns 412
No_of_seqs 344 out of 1432
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 03:27:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015136.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015136hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01299 synapt_SV2 synaptic 100.0 1.7E-40 3.6E-45 320.2 32.7 400 13-412 155-679 (742)
2 KOG0253 Synaptic vesicle trans 100.0 2.4E-37 5.3E-42 261.6 26.5 394 10-412 63-465 (528)
3 TIGR00887 2A0109 phosphate:H+ 100.0 1.1E-35 2.4E-40 282.7 31.5 363 14-412 5-423 (502)
4 COG2271 UhpC Sugar phosphate p 100.0 2.3E-35 4.9E-40 256.1 24.4 344 19-412 23-377 (448)
5 TIGR02332 HpaX 4-hydroxyphenyl 100.0 9.2E-35 2E-39 269.4 28.3 353 20-412 3-364 (412)
6 PRK11551 putative 3-hydroxyphe 100.0 9E-34 2E-38 263.5 30.8 328 20-412 10-339 (406)
7 TIGR00895 2A0115 benzoate tran 100.0 3.4E-33 7.3E-38 259.1 32.8 358 18-412 10-369 (398)
8 PRK10642 proline/glycine betai 100.0 1.8E-33 3.8E-38 266.7 31.5 333 24-412 15-373 (490)
9 COG2814 AraJ Arabinose efflux 100.0 7.4E-34 1.6E-38 250.3 26.1 320 20-411 8-330 (394)
10 TIGR00891 2A0112 putative sial 100.0 2.2E-33 4.8E-38 261.0 30.7 350 19-412 6-359 (405)
11 PRK10406 alpha-ketoglutarate t 100.0 3.8E-33 8.3E-38 260.7 30.8 324 20-412 17-367 (432)
12 KOG0569 Permease of the major 100.0 8.2E-34 1.8E-38 257.7 24.0 361 20-412 6-399 (485)
13 TIGR00898 2A0119 cation transp 100.0 5.1E-33 1.1E-37 265.6 29.5 325 46-412 110-441 (505)
14 PRK09556 uhpT sugar phosphate 100.0 8.6E-34 1.9E-38 267.6 22.3 358 6-412 10-380 (467)
15 PRK10077 xylE D-xylose transpo 100.0 1.7E-32 3.8E-37 260.5 31.0 355 20-412 7-395 (479)
16 TIGR00903 2A0129 major facilit 100.0 1.2E-32 2.6E-37 250.1 27.0 304 37-412 3-311 (368)
17 PRK12307 putative sialic acid 100.0 2.2E-32 4.8E-37 255.9 28.9 337 20-412 13-352 (426)
18 PRK09952 shikimate transporter 100.0 1.4E-31 3E-36 250.2 30.5 327 22-412 19-374 (438)
19 PRK03545 putative arabinose tr 100.0 7.8E-32 1.7E-36 248.9 28.3 317 21-411 5-324 (390)
20 PRK14995 methyl viologen resis 100.0 1.7E-31 3.6E-36 253.4 31.1 366 22-411 3-381 (495)
21 PRK03699 putative transporter; 100.0 2.7E-31 5.9E-36 245.4 29.9 319 22-411 4-324 (394)
22 TIGR00879 SP MFS transporter, 100.0 2.5E-32 5.4E-37 259.6 23.0 362 24-412 27-414 (481)
23 PRK11663 regulatory protein Uh 100.0 2.5E-31 5.3E-36 248.5 28.6 285 20-355 18-306 (434)
24 PRK15075 citrate-proton sympor 100.0 8.6E-31 1.9E-35 245.0 31.3 323 23-412 13-362 (434)
25 PRK10213 nepI ribonucleoside t 100.0 2.2E-30 4.9E-35 238.7 29.4 317 21-411 16-335 (394)
26 PLN00028 nitrate transmembrane 100.0 1.2E-30 2.6E-35 246.0 26.7 332 19-411 30-378 (476)
27 KOG0254 Predicted transporter 100.0 1.9E-30 4.2E-35 246.9 26.0 358 24-412 44-426 (513)
28 PRK03893 putative sialic acid 100.0 4.8E-30 1E-34 244.8 28.6 357 20-412 15-397 (496)
29 TIGR00710 efflux_Bcr_CflA drug 100.0 1.5E-29 3.2E-34 233.7 31.0 311 34-412 14-331 (385)
30 PRK09705 cynX putative cyanate 100.0 7.8E-30 1.7E-34 235.3 28.7 311 23-410 8-321 (393)
31 TIGR00890 2A0111 Oxalate/Forma 100.0 1.1E-30 2.5E-35 240.3 23.0 308 37-412 15-326 (377)
32 TIGR00711 efflux_EmrB drug res 100.0 1E-29 2.2E-34 242.0 30.0 355 25-411 2-378 (485)
33 TIGR00893 2A0114 d-galactonate 100.0 1.5E-30 3.2E-35 241.2 23.6 331 34-412 3-342 (399)
34 PRK10133 L-fucose transporter; 100.0 2.4E-29 5.1E-34 234.3 30.5 325 20-411 21-377 (438)
35 PF07690 MFS_1: Major Facilita 100.0 2.7E-30 5.9E-35 235.6 23.0 321 31-412 2-330 (352)
36 TIGR00894 2A0114euk Na(+)-depe 100.0 5.8E-30 1.3E-34 241.9 26.0 288 19-358 13-327 (465)
37 TIGR00900 2A0121 H+ Antiporter 100.0 2.6E-29 5.5E-34 230.4 28.4 320 31-412 5-332 (365)
38 COG2223 NarK Nitrate/nitrite t 100.0 2.7E-29 5.8E-34 218.9 25.2 322 20-411 9-344 (417)
39 PRK15034 nitrate/nitrite trans 100.0 3.2E-29 7E-34 229.1 26.9 312 23-411 32-375 (462)
40 PRK10091 MFS transport protein 100.0 3.7E-29 8E-34 230.2 27.1 297 27-396 5-304 (382)
41 PRK15402 multidrug efflux syst 100.0 1.2E-28 2.6E-33 229.0 30.1 318 20-404 8-332 (406)
42 PRK11273 glpT sn-glycerol-3-ph 100.0 8.3E-29 1.8E-33 232.7 29.0 342 20-412 24-378 (452)
43 TIGR00886 2A0108 nitrite extru 100.0 3.4E-29 7.5E-34 229.6 25.0 326 29-411 5-348 (366)
44 PRK05122 major facilitator sup 100.0 9.4E-29 2E-33 229.3 27.4 309 24-411 14-332 (399)
45 KOG0255 Synaptic vesicle trans 100.0 3.1E-28 6.6E-33 233.2 28.7 323 52-412 110-437 (521)
46 PRK10504 putative transporter; 100.0 9.1E-28 2E-32 227.5 31.7 362 26-411 11-383 (471)
47 TIGR00881 2A0104 phosphoglycer 100.0 7.7E-29 1.7E-33 228.3 23.4 331 33-412 3-341 (379)
48 PRK12382 putative transporter; 100.0 4.2E-28 9.1E-33 224.3 27.6 304 29-411 19-332 (392)
49 PRK11043 putative transporter; 100.0 1.3E-27 2.8E-32 221.7 30.9 306 34-411 15-326 (401)
50 PRK15403 multidrug efflux syst 100.0 1.3E-27 2.9E-32 221.5 30.5 310 27-403 18-334 (413)
51 TIGR00892 2A0113 monocarboxyla 100.0 3.8E-28 8.2E-33 227.9 26.7 346 19-412 13-364 (455)
52 TIGR00885 fucP L-fucose:H+ sym 100.0 1.7E-27 3.7E-32 220.0 30.3 317 27-411 5-351 (410)
53 TIGR00899 2A0120 sugar efflux 100.0 1.1E-27 2.4E-32 220.4 27.7 310 32-412 4-319 (375)
54 PRK11195 lysophospholipid tran 100.0 2.8E-27 6.1E-32 218.0 28.6 314 30-411 8-323 (393)
55 PRK11102 bicyclomycin/multidru 100.0 1.1E-27 2.4E-32 220.5 25.9 307 39-411 5-317 (377)
56 PRK10489 enterobactin exporter 100.0 1.4E-27 3E-32 222.5 26.7 312 34-412 26-343 (417)
57 PRK10473 multidrug efflux syst 100.0 6.3E-27 1.4E-31 216.5 30.7 282 32-383 10-294 (392)
58 PRK11652 emrD multidrug resist 100.0 5.3E-27 1.2E-31 217.1 29.6 319 23-411 6-329 (394)
59 TIGR00883 2A0106 metabolite-pr 100.0 4E-27 8.7E-32 218.1 28.6 313 35-412 3-343 (394)
60 PRK03633 putative MFS family t 100.0 4.7E-27 1E-31 216.3 27.7 307 27-411 8-315 (381)
61 KOG1330 Sugar transporter/spin 100.0 4.9E-30 1.1E-34 225.1 6.9 182 20-201 28-212 (493)
62 TIGR00712 glpT glycerol-3-phos 100.0 1.7E-27 3.6E-32 223.1 24.3 287 22-358 24-317 (438)
63 cd06174 MFS The Major Facilita 100.0 5.7E-27 1.2E-31 213.6 26.9 291 30-412 4-296 (352)
64 PRK09874 drug efflux system pr 100.0 1.2E-26 2.6E-31 216.0 28.9 315 29-411 18-341 (408)
65 TIGR00897 2A0118 polyol permea 100.0 1.5E-26 3.3E-31 214.3 28.7 301 44-411 32-345 (402)
66 KOG2532 Permease of the major 100.0 2.3E-26 5E-31 211.8 27.2 276 52-379 65-354 (466)
67 TIGR00901 2A0125 AmpG-related 100.0 1.5E-26 3.2E-31 211.2 25.9 305 42-412 5-340 (356)
68 PF00083 Sugar_tr: Sugar (and 100.0 6.5E-33 1.4E-37 261.3 -16.5 345 31-412 6-380 (451)
69 TIGR00896 CynX cyanate transpo 100.0 9.7E-27 2.1E-31 212.3 24.4 293 41-408 16-312 (355)
70 KOG2533 Permease of the major 100.0 2.2E-26 4.9E-31 212.3 22.8 337 23-407 43-393 (495)
71 KOG2504 Monocarboxylate transp 99.9 4.5E-26 9.7E-31 212.5 23.9 369 19-411 40-418 (509)
72 PRK10054 putative transporter; 99.9 1.1E-25 2.4E-30 207.6 25.8 311 33-412 15-329 (395)
73 PRK11646 multidrug resistance 99.9 4.3E-25 9.3E-30 204.0 29.3 296 44-412 30-328 (400)
74 KOG0252 Inorganic phosphate tr 99.9 3.6E-27 7.9E-32 206.3 13.7 364 20-412 36-437 (538)
75 PRK15011 sugar efflux transpor 99.9 3.7E-25 8.1E-30 204.4 27.8 306 34-412 24-336 (393)
76 TIGR00902 2A0127 phenyl propri 99.9 3.4E-25 7.5E-30 203.8 27.0 309 30-411 9-322 (382)
77 PRK11128 putative 3-phenylprop 99.9 8.1E-25 1.8E-29 201.4 26.4 304 34-409 13-321 (382)
78 PRK11010 ampG muropeptide tran 99.9 1.6E-24 3.5E-29 204.8 28.6 276 30-373 17-304 (491)
79 TIGR00805 oat sodium-independe 99.9 1E-25 2.3E-30 217.4 18.2 303 28-374 36-415 (633)
80 PRK11902 ampG muropeptide tran 99.9 1.2E-23 2.5E-28 195.1 29.8 312 32-411 6-337 (402)
81 TIGR00806 rfc RFC reduced fola 99.9 1.7E-23 3.7E-28 187.9 26.7 163 40-203 41-207 (511)
82 COG0738 FucP Fucose permease [ 99.9 7E-23 1.5E-27 177.7 28.3 317 25-411 13-354 (422)
83 PRK08633 2-acyl-glycerophospho 99.9 2.7E-23 5.7E-28 217.7 29.6 310 42-412 27-353 (1146)
84 PTZ00207 hypothetical protein; 99.9 2.2E-23 4.8E-28 196.0 25.4 178 20-201 23-208 (591)
85 PRK06814 acylglycerophosphoeth 99.9 1.3E-23 2.9E-28 219.2 26.2 323 27-412 17-365 (1140)
86 PRK09528 lacY galactoside perm 99.9 6E-23 1.3E-27 191.6 27.2 320 34-412 19-346 (420)
87 TIGR00882 2A0105 oligosacchari 99.9 1.1E-22 2.3E-27 188.4 24.5 317 32-410 9-336 (396)
88 COG2807 CynX Cyanate permease 99.9 3.3E-22 7.2E-27 170.9 23.9 311 24-409 11-324 (395)
89 PF06609 TRI12: Fungal trichot 99.9 8.7E-22 1.9E-26 184.0 28.1 359 27-409 46-433 (599)
90 PRK10207 dipeptide/tripeptide 99.9 1.1E-21 2.4E-26 184.6 29.1 174 26-199 15-194 (489)
91 TIGR00924 yjdL_sub1_fam amino 99.9 1.4E-21 3.1E-26 183.8 29.8 171 28-198 13-191 (475)
92 KOG2615 Permease of the major 99.9 9E-23 2E-27 174.8 18.4 304 58-411 66-382 (451)
93 TIGR00792 gph sugar (Glycoside 99.9 8E-22 1.7E-26 185.2 26.0 299 46-411 21-341 (437)
94 TIGR00889 2A0110 nucleoside tr 99.9 9.9E-22 2.1E-26 182.4 25.7 316 32-412 9-339 (418)
95 PF05977 MFS_3: Transmembrane 99.9 3.8E-21 8.3E-26 180.5 26.1 320 27-411 12-337 (524)
96 KOG3764 Vesicular amine transp 99.9 1.2E-22 2.6E-27 175.1 11.7 274 53-396 99-376 (464)
97 PRK09584 tppB putative tripept 99.9 3E-20 6.5E-25 175.9 28.8 162 30-191 26-193 (500)
98 TIGR02718 sider_RhtX_FptX side 99.9 8.1E-20 1.8E-24 168.9 27.0 274 27-370 3-286 (390)
99 TIGR01301 GPH_sucrose GPH fami 99.8 1.6E-18 3.4E-23 160.2 28.2 335 32-411 11-410 (477)
100 PRK15462 dipeptide/tripeptide 99.8 3.3E-18 7.1E-23 158.7 27.9 168 27-194 11-184 (493)
101 PRK09669 putative symporter Ya 99.8 6.4E-18 1.4E-22 158.7 25.5 296 46-411 31-349 (444)
102 PF13347 MFS_2: MFS/sugar tran 99.8 9E-19 2E-23 163.7 18.6 297 46-411 23-345 (428)
103 TIGR00788 fbt folate/biopterin 99.8 1.7E-18 3.7E-23 162.6 18.1 335 25-412 26-382 (468)
104 PRK10429 melibiose:sodium symp 99.8 1.4E-17 3E-22 157.5 24.3 309 38-411 19-354 (473)
105 PRK10642 proline/glycine betai 99.8 1.2E-17 2.6E-22 158.7 18.3 184 39-222 264-458 (490)
106 PRK11462 putative transporter; 99.8 9.4E-16 2E-20 144.0 27.9 293 46-409 31-346 (460)
107 PF03825 Nuc_H_symport: Nucleo 99.8 6.4E-16 1.4E-20 141.2 25.3 311 34-412 11-332 (400)
108 KOG2563 Permease of the major 99.8 1.5E-16 3.3E-21 140.2 19.8 327 18-409 38-387 (480)
109 PRK09848 glucuronide transport 99.7 1.8E-15 3.9E-20 142.4 26.3 296 46-411 30-349 (448)
110 COG2211 MelB Na+/melibiose sym 99.7 4.9E-15 1.1E-19 134.3 26.6 311 35-410 22-356 (467)
111 TIGR01272 gluP glucose/galacto 99.7 3.5E-16 7.6E-21 138.9 19.1 236 109-411 6-260 (310)
112 PF01306 LacY_symp: LacY proto 99.7 3.9E-16 8.5E-21 140.0 19.2 316 34-411 16-342 (412)
113 PF11700 ATG22: Vacuole efflux 99.7 3E-14 6.5E-19 132.8 31.1 293 60-412 70-411 (477)
114 KOG4686 Predicted sugar transp 99.7 3.1E-16 6.7E-21 129.5 10.2 291 22-371 41-343 (459)
115 TIGR00889 2A0110 nucleoside tr 99.6 2.7E-15 5.8E-20 139.4 14.5 157 45-201 228-405 (418)
116 TIGR01299 synapt_SV2 synaptic 99.6 6.4E-15 1.4E-19 143.4 17.2 139 63-202 598-737 (742)
117 COG3104 PTR2 Dipeptide/tripept 99.6 1.8E-13 3.9E-18 123.2 24.0 173 27-199 23-206 (498)
118 PRK15011 sugar efflux transpor 99.6 1E-14 2.2E-19 134.9 16.8 155 45-200 236-392 (393)
119 PRK09528 lacY galactoside perm 99.6 5E-15 1.1E-19 138.3 14.5 149 53-201 255-406 (420)
120 TIGR00880 2_A_01_02 Multidrug 99.6 1.1E-15 2.5E-20 119.5 8.4 135 66-200 4-140 (141)
121 cd06174 MFS The Major Facilita 99.6 4.2E-14 9E-19 128.8 16.9 164 34-197 184-350 (352)
122 PRK11551 putative 3-hydroxyphe 99.6 3E-14 6.5E-19 132.6 16.2 160 41-200 236-397 (406)
123 TIGR00890 2A0111 Oxalate/Forma 99.6 1.5E-14 3.3E-19 133.0 14.0 146 46-191 226-374 (377)
124 PF03209 PUCC: PUCC protein; 99.6 7.9E-13 1.7E-17 116.8 22.3 291 49-404 4-324 (403)
125 PRK05122 major facilitator sup 99.6 8.7E-14 1.9E-18 129.2 17.2 156 44-201 235-391 (399)
126 TIGR00899 2A0120 sugar efflux 99.6 8.4E-14 1.8E-18 128.2 15.8 150 50-200 225-375 (375)
127 COG2270 Permeases of the major 99.6 2E-12 4.4E-17 114.0 23.3 291 60-412 58-372 (438)
128 TIGR00902 2A0127 phenyl propri 99.5 1.4E-13 3.1E-18 126.8 15.3 152 41-194 221-374 (382)
129 PRK09556 uhpT sugar phosphate 99.5 2E-13 4.3E-18 129.2 16.5 169 29-197 262-447 (467)
130 PRK10489 enterobactin exporter 99.5 2E-13 4.4E-18 127.4 16.2 159 44-202 242-403 (417)
131 PRK09874 drug efflux system pr 99.5 1.4E-13 3E-18 128.3 15.0 155 43-197 237-396 (408)
132 PF05631 DUF791: Protein of un 99.5 4.5E-12 9.8E-17 110.3 23.0 262 42-373 51-324 (354)
133 PRK12382 putative transporter; 99.5 2.2E-13 4.7E-18 126.1 15.7 152 43-196 234-386 (392)
134 PRK03893 putative sialic acid 99.5 1.4E-13 3.1E-18 131.6 14.9 145 45-189 295-443 (496)
135 PRK03545 putative arabinose tr 99.5 4.6E-13 1E-17 123.9 17.4 149 45-195 226-376 (390)
136 PF01770 Folate_carrier: Reduc 99.5 2.4E-11 5.3E-16 108.7 27.3 336 41-402 20-361 (412)
137 KOG2325 Predicted transporter/ 99.5 3.5E-13 7.6E-18 122.6 15.7 184 20-203 29-234 (488)
138 TIGR00892 2A0113 monocarboxyla 99.5 1.1E-13 2.3E-18 130.4 12.7 156 38-193 254-415 (455)
139 PRK03699 putative transporter; 99.5 2.9E-13 6.4E-18 125.3 14.5 167 33-200 213-381 (394)
140 PRK03633 putative MFS family t 99.5 7.3E-13 1.6E-17 122.1 17.0 151 45-198 220-371 (381)
141 TIGR00879 SP MFS transporter, 99.5 7.6E-13 1.6E-17 125.9 17.6 178 25-202 284-474 (481)
142 PF03137 OATP: Organic Anion T 99.5 2.1E-15 4.5E-20 142.5 -0.2 306 30-373 8-389 (539)
143 PRK09705 cynX putative cyanate 99.5 1.8E-12 4E-17 119.8 17.6 162 39-202 219-385 (393)
144 KOG2816 Predicted transporter 99.5 2.1E-11 4.4E-16 112.7 23.5 322 25-405 22-354 (463)
145 TIGR00897 2A0118 polyol permea 99.5 1.9E-12 4.1E-17 120.2 16.8 164 34-198 231-400 (402)
146 KOG3626 Organic anion transpor 99.5 1.4E-12 2.9E-17 123.7 15.3 304 26-373 98-476 (735)
147 PRK10077 xylE D-xylose transpo 99.5 4.6E-12 9.9E-17 120.7 19.1 162 41-202 287-461 (479)
148 TIGR00887 2A0109 phosphate:H+ 99.4 3.6E-12 7.9E-17 121.7 16.8 172 32-203 295-493 (502)
149 TIGR00891 2A0112 putative sial 99.4 2.9E-12 6.3E-17 119.2 15.4 136 49-184 263-401 (405)
150 TIGR00893 2A0114 d-galactonate 99.4 2.9E-12 6.3E-17 118.6 15.2 165 31-195 221-395 (399)
151 PRK12307 putative sialic acid 99.4 7.3E-12 1.6E-16 117.4 17.7 141 44-184 250-393 (426)
152 PRK09952 shikimate transporter 99.4 8.1E-12 1.8E-16 117.2 17.9 157 45-201 270-435 (438)
153 PF06813 Nodulin-like: Nodulin 99.4 2.9E-12 6.3E-17 107.9 12.8 177 23-202 1-185 (250)
154 TIGR00883 2A0106 metabolite-pr 99.4 1.9E-12 4.1E-17 119.8 12.9 158 32-189 226-391 (394)
155 PRK11010 ampG muropeptide tran 99.4 1.1E-11 2.4E-16 117.6 17.2 155 47-201 245-405 (491)
156 PF05977 MFS_3: Transmembrane 99.4 8.9E-12 1.9E-16 117.6 16.3 150 45-194 238-389 (524)
157 TIGR00882 2A0105 oligosacchari 99.4 8.7E-12 1.9E-16 115.6 15.9 139 56-194 250-390 (396)
158 COG2814 AraJ Arabinose efflux 99.4 1.4E-11 3E-16 109.8 16.3 161 35-197 222-384 (394)
159 PLN00028 nitrate transmembrane 99.4 1E-11 2.3E-16 117.5 16.3 149 49-199 277-433 (476)
160 PRK11273 glpT sn-glycerol-3-ph 99.4 1.3E-11 2.8E-16 116.4 16.4 164 32-195 260-431 (452)
161 PRK11663 regulatory protein Uh 99.4 1.7E-11 3.8E-16 114.9 16.6 164 32-196 250-421 (434)
162 PRK11128 putative 3-phenylprop 99.4 1.8E-11 3.9E-16 112.8 16.4 144 46-191 226-371 (382)
163 TIGR00900 2A0121 H+ Antiporter 99.4 7E-12 1.5E-16 114.8 13.1 131 46-176 232-365 (365)
164 TIGR00895 2A0115 benzoate tran 99.4 1.2E-11 2.6E-16 114.7 14.2 140 32-171 257-397 (398)
165 PF11700 ATG22: Vacuole efflux 99.4 4.2E-11 9.1E-16 111.9 17.6 160 42-201 299-470 (477)
166 PRK15075 citrate-proton sympor 99.4 3E-11 6.4E-16 113.4 16.3 142 37-178 250-398 (434)
167 PRK10504 putative transporter; 99.3 1.7E-11 3.7E-16 116.4 14.8 140 38-177 274-418 (471)
168 KOG0569 Permease of the major 99.3 2.3E-10 5E-15 105.2 20.5 180 22-202 267-458 (485)
169 TIGR02718 sider_RhtX_FptX side 99.3 2.9E-11 6.3E-16 111.9 14.4 147 47-193 230-385 (390)
170 TIGR00898 2A0119 cation transp 99.3 3.1E-11 6.8E-16 115.7 14.2 148 50-202 348-498 (505)
171 TIGR00792 gph sugar (Glycoside 99.3 7.2E-11 1.6E-15 111.1 16.3 130 47-177 244-383 (437)
172 PRK10406 alpha-ketoglutarate t 99.3 8.8E-11 1.9E-15 110.1 16.8 159 42-200 260-425 (432)
173 TIGR01272 gluP glucose/galacto 99.3 1E-10 2.2E-15 104.1 15.2 155 29-186 144-302 (310)
174 PRK10054 putative transporter; 99.3 6.3E-11 1.4E-15 109.6 13.9 142 53-195 237-380 (395)
175 TIGR00712 glpT glycerol-3-phos 99.3 7.1E-11 1.5E-15 110.9 14.4 160 43-202 269-437 (438)
176 TIGR02332 HpaX 4-hydroxyphenyl 99.3 8.3E-11 1.8E-15 109.4 13.9 159 30-188 247-410 (412)
177 PRK10213 nepI ribonucleoside t 99.3 2.4E-10 5.2E-15 105.7 16.5 144 46-191 238-383 (394)
178 PRK10091 MFS transport protein 99.2 1.3E-10 2.9E-15 107.1 14.2 147 46-194 221-371 (382)
179 PRK11902 ampG muropeptide tran 99.2 3.2E-10 6.8E-15 105.4 16.5 147 48-198 233-389 (402)
180 PRK15402 multidrug efflux syst 99.2 3.1E-10 6.7E-15 105.6 16.5 144 47-191 237-387 (406)
181 PF01306 LacY_symp: LacY proto 99.2 2.6E-10 5.6E-15 102.8 13.3 159 44-202 243-404 (412)
182 PRK11646 multidrug resistance 99.2 3E-10 6.5E-15 105.3 14.2 150 46-195 229-384 (400)
183 TIGR00896 CynX cyanate transpo 99.2 2.9E-10 6.4E-15 103.8 13.6 134 42-176 214-350 (355)
184 TIGR00881 2A0104 phosphoglycer 99.2 1.2E-10 2.6E-15 107.3 10.6 150 32-181 223-379 (379)
185 PF03825 Nuc_H_symport: Nucleo 99.2 5E-10 1.1E-14 102.7 14.4 166 35-200 217-397 (400)
186 COG2270 Permeases of the major 99.2 3E-10 6.5E-15 100.4 12.3 176 25-201 254-431 (438)
187 KOG2504 Monocarboxylate transp 99.2 6.9E-11 1.5E-15 111.1 8.9 174 26-199 299-476 (509)
188 PRK08633 2-acyl-glycerophospho 99.2 4.1E-10 8.9E-15 118.8 15.8 142 47-188 255-399 (1146)
189 COG2223 NarK Nitrate/nitrite t 99.2 5.5E-10 1.2E-14 98.8 13.8 163 32-195 225-397 (417)
190 TIGR00710 efflux_Bcr_CflA drug 99.2 1.2E-09 2.5E-14 101.0 16.2 137 45-183 226-370 (385)
191 COG2271 UhpC Sugar phosphate p 99.2 3.7E-10 7.9E-15 99.8 11.6 169 26-194 253-429 (448)
192 PF03092 BT1: BT1 family; Int 99.1 7.9E-10 1.7E-14 102.8 14.3 155 45-200 10-176 (433)
193 PRK11195 lysophospholipid tran 99.1 2.1E-09 4.5E-14 99.4 15.6 141 49-191 230-372 (393)
194 PRK09848 glucuronide transport 99.1 3.7E-09 7.9E-14 99.7 17.5 135 43-177 246-391 (448)
195 TIGR00903 2A0129 major facilit 99.1 2.5E-09 5.4E-14 97.6 15.6 163 32-200 199-366 (368)
196 TIGR00926 2A1704 Peptide:H+ sy 99.1 8.8E-08 1.9E-12 92.9 26.5 152 45-196 8-179 (654)
197 TIGR00711 efflux_EmrB drug res 99.1 7E-10 1.5E-14 105.9 12.1 133 42-174 272-410 (485)
198 PRK10473 multidrug efflux syst 99.1 2.1E-09 4.6E-14 99.6 14.9 134 50-188 229-363 (392)
199 KOG4686 Predicted sugar transp 99.1 8E-10 1.7E-14 92.1 10.5 148 49-198 289-442 (459)
200 PF13347 MFS_2: MFS/sugar tran 99.1 4.4E-09 9.5E-14 98.5 16.7 145 33-177 233-387 (428)
201 PRK10429 melibiose:sodium symp 99.1 7E-09 1.5E-13 98.4 17.5 138 40-177 246-396 (473)
202 PRK15034 nitrate/nitrite trans 99.1 8.2E-09 1.8E-13 95.5 17.2 162 35-197 262-453 (462)
203 PRK06814 acylglycerophosphoeth 99.1 1.9E-09 4.1E-14 113.5 14.6 143 47-189 247-412 (1140)
204 PRK14995 methyl viologen resis 99.1 1.5E-09 3.3E-14 103.5 12.5 129 45-173 279-412 (495)
205 TIGR00894 2A0114euk Na(+)-depe 99.1 4.8E-09 1E-13 99.5 15.8 171 27-198 263-449 (465)
206 TIGR00901 2A0125 AmpG-related 99.1 9.7E-10 2.1E-14 100.4 10.3 120 39-158 223-355 (356)
207 PRK10133 L-fucose transporter; 99.1 3.5E-09 7.5E-14 99.2 14.1 137 52-191 287-425 (438)
208 PRK11102 bicyclomycin/multidru 99.0 1.2E-08 2.5E-13 94.1 16.6 119 50-169 220-344 (377)
209 PRK11043 putative transporter; 99.0 9.5E-09 2.1E-13 95.5 15.4 134 45-179 223-362 (401)
210 PF07690 MFS_1: Major Facilita 99.0 2.6E-09 5.6E-14 97.3 10.9 126 40-165 221-352 (352)
211 PRK09669 putative symporter Ya 99.0 7.6E-09 1.6E-13 97.5 14.1 130 48-177 252-391 (444)
212 KOG0253 Synaptic vesicle trans 99.0 1.4E-08 3.1E-13 88.0 13.4 132 69-202 390-522 (528)
213 COG0477 ProP Permeases of the 98.9 2.2E-08 4.8E-13 89.2 14.4 154 36-189 13-175 (338)
214 TIGR00924 yjdL_sub1_fam amino 98.9 8.6E-08 1.9E-12 90.7 16.0 133 62-194 314-463 (475)
215 PF06779 DUF1228: Protein of u 98.8 2.3E-08 4.9E-13 68.2 8.0 81 37-117 4-84 (85)
216 COG2211 MelB Na+/melibiose sym 98.8 5.3E-07 1.2E-11 82.6 19.1 143 34-176 245-398 (467)
217 PRK11652 emrD multidrug resist 98.8 1.1E-07 2.4E-12 88.2 15.1 128 50-178 233-364 (394)
218 TIGR00885 fucP L-fucose:H+ sym 98.8 7.4E-08 1.6E-12 89.5 13.8 140 45-187 252-400 (410)
219 KOG0254 Predicted transporter 98.8 3.3E-07 7.1E-12 87.9 18.5 178 24-202 294-487 (513)
220 TIGR00788 fbt folate/biopterin 98.8 3.2E-08 7E-13 93.4 10.9 148 53-200 281-447 (468)
221 KOG3098 Uncharacterized conser 98.8 6.1E-06 1.3E-10 75.8 25.1 104 66-170 56-160 (461)
222 PRK09584 tppB putative tripept 98.8 1.1E-07 2.3E-12 90.7 14.2 130 62-191 318-471 (500)
223 KOG0637 Sucrose transporter an 98.8 1.3E-08 2.8E-13 90.8 7.1 147 25-171 32-202 (498)
224 PF06963 FPN1: Ferroportin1 (F 98.8 1.6E-05 3.5E-10 73.1 27.2 302 29-371 6-336 (432)
225 KOG0252 Inorganic phosphate tr 98.8 3E-08 6.6E-13 88.6 9.1 179 25-203 304-502 (538)
226 COG2807 CynX Cyanate permease 98.8 3.8E-07 8.3E-12 79.4 15.3 158 36-194 219-380 (395)
227 TIGR00769 AAA ADP/ATP carrier 98.8 3.5E-06 7.5E-11 78.3 22.3 144 26-173 8-190 (472)
228 PRK11462 putative transporter; 98.7 3.9E-07 8.5E-12 86.0 15.9 130 48-177 251-390 (460)
229 PF03209 PUCC: PUCC protein; 98.7 1.6E-06 3.5E-11 77.3 17.7 147 49-195 233-394 (403)
230 KOG3762 Predicted transporter 98.7 4.2E-08 9.1E-13 89.4 6.6 152 46-197 392-545 (618)
231 PF02487 CLN3: CLN3 protein; 98.7 3.2E-05 6.8E-10 70.0 24.3 130 63-198 62-194 (402)
232 TIGR00886 2A0108 nitrite extru 98.6 1.2E-07 2.6E-12 87.0 9.3 115 45-160 245-365 (366)
233 KOG2532 Permease of the major 98.6 4.1E-07 8.9E-12 84.8 11.6 171 26-197 259-445 (466)
234 PRK15462 dipeptide/tripeptide 98.6 2.5E-07 5.4E-12 86.7 10.2 121 282-412 9-131 (493)
235 KOG4332 Predicted sugar transp 98.6 1.6E-06 3.5E-11 72.1 13.1 99 42-141 54-154 (454)
236 PF00083 Sugar_tr: Sugar (and 98.6 2.6E-10 5.5E-15 107.8 -10.5 170 32-203 260-441 (451)
237 PF06609 TRI12: Fungal trichot 98.6 4.5E-06 9.7E-11 79.5 17.8 144 27-170 312-463 (599)
238 PRK10207 dipeptide/tripeptide 98.6 1.6E-06 3.4E-11 82.4 14.5 131 62-192 311-469 (489)
239 PF12832 MFS_1_like: MFS_1 lik 98.5 1E-06 2.2E-11 59.9 8.6 69 32-100 7-75 (77)
240 KOG3764 Vesicular amine transp 98.5 6.5E-08 1.4E-12 84.9 3.3 154 41-194 286-449 (464)
241 COG0738 FucP Fucose permease [ 98.5 1.5E-06 3.2E-11 77.0 11.2 159 31-192 242-402 (422)
242 PF05978 UNC-93: Ion channel r 98.5 3.8E-06 8.3E-11 65.6 12.0 114 58-172 35-149 (156)
243 PRK15403 multidrug efflux syst 98.4 1.2E-05 2.6E-10 75.0 16.8 146 42-189 235-387 (413)
244 KOG3810 Micronutrient transpor 98.3 8.9E-06 1.9E-10 70.3 12.1 159 45-203 25-187 (433)
245 KOG3574 Acetyl-CoA transporter 98.3 4.8E-05 1.1E-09 66.8 15.2 142 24-168 30-189 (510)
246 KOG3762 Predicted transporter 98.2 4.6E-05 9.9E-10 70.1 14.8 89 324-412 402-490 (618)
247 TIGR01301 GPH_sucrose GPH fami 98.2 7.1E-05 1.5E-09 70.1 15.7 139 64-202 309-475 (477)
248 PF03219 TLC: TLC ATP/ADP tran 98.2 0.0019 4E-08 60.8 24.5 153 20-173 19-205 (491)
249 KOG2533 Permease of the major 98.2 8.1E-06 1.8E-10 76.6 8.6 160 26-185 274-442 (495)
250 PTZ00207 hypothetical protein; 98.1 2.6E-05 5.6E-10 74.7 11.8 115 285-411 30-150 (591)
251 KOG1330 Sugar transporter/spin 98.1 1E-05 2.2E-10 73.0 7.1 91 322-412 62-152 (493)
252 KOG1237 H+/oligopeptide sympor 98.0 0.0025 5.3E-08 61.3 22.2 176 22-197 34-243 (571)
253 TIGR00880 2_A_01_02 Multidrug 98.0 8.8E-06 1.9E-10 62.9 4.7 77 336-412 6-82 (141)
254 COG3104 PTR2 Dipeptide/tripept 98.0 3.5E-05 7.6E-10 70.5 8.8 125 282-412 21-148 (498)
255 TIGR00939 2a57 Equilibrative N 97.9 0.014 3E-07 54.6 25.3 82 329-411 308-402 (437)
256 KOG0255 Synaptic vesicle trans 97.9 0.00026 5.6E-09 68.4 13.6 152 48-203 341-497 (521)
257 TIGR00806 rfc RFC reduced fola 97.8 0.00021 4.5E-09 65.9 10.9 91 321-412 54-145 (511)
258 PF00854 PTR2: POT family; In 97.8 4.7E-05 1E-09 70.0 6.9 108 91-198 2-122 (372)
259 PF13000 Acatn: Acetyl-coenzym 97.8 0.0014 2.9E-08 60.4 15.7 141 29-171 4-177 (544)
260 KOG2816 Predicted transporter 97.8 0.00019 4.2E-09 66.9 10.3 125 48-172 265-390 (463)
261 COG3202 ATP/ADP translocase [E 97.8 0.014 3.1E-07 53.7 21.6 151 19-173 21-209 (509)
262 KOG2615 Permease of the major 97.6 0.00019 4.1E-09 63.4 7.6 122 52-173 289-413 (451)
263 KOG2563 Permease of the major 97.6 0.00099 2.1E-08 60.4 11.8 160 41-200 282-451 (480)
264 PF12832 MFS_1_like: MFS_1 lik 97.5 0.00059 1.3E-08 46.3 7.1 47 322-368 29-75 (77)
265 TIGR00805 oat sodium-independe 97.5 0.00019 4E-09 70.5 6.3 92 321-412 61-203 (633)
266 PF06813 Nodulin-like: Nodulin 97.3 0.00099 2.1E-08 56.6 7.4 81 285-377 5-85 (250)
267 KOG3097 Predicted membrane pro 97.3 0.11 2.4E-06 45.4 19.7 72 69-141 67-139 (390)
268 KOG1479 Nucleoside transporter 97.0 0.15 3.3E-06 46.3 18.3 113 31-145 24-149 (406)
269 PF03092 BT1: BT1 family; Int 96.9 0.0029 6.2E-08 59.3 7.0 146 57-202 252-416 (433)
270 PF06779 DUF1228: Protein of u 96.7 0.0044 9.6E-08 42.5 5.1 63 321-383 20-82 (85)
271 PF05631 DUF791: Protein of un 96.7 0.042 9.1E-07 48.9 12.4 78 322-400 63-140 (354)
272 PF06963 FPN1: Ferroportin1 (F 96.5 0.054 1.2E-06 50.3 12.3 144 27-170 260-414 (432)
273 PRK03612 spermidine synthase; 96.5 0.13 2.9E-06 49.3 15.3 139 49-189 39-187 (521)
274 KOG3098 Uncharacterized conser 96.4 0.12 2.7E-06 48.0 14.0 103 67-170 286-410 (461)
275 KOG2325 Predicted transporter/ 96.2 0.0057 1.2E-07 56.9 4.5 174 18-191 255-467 (488)
276 PF07672 MFS_Mycoplasma: Mycop 96.2 0.039 8.5E-07 46.6 8.7 55 144-198 2-61 (267)
277 PF02487 CLN3: CLN3 protein; 96.0 0.052 1.1E-06 49.6 9.3 111 58-172 279-395 (402)
278 TIGR00926 2A1704 Peptide:H+ sy 94.9 0.06 1.3E-06 53.0 6.4 89 323-411 18-115 (654)
279 PF05978 UNC-93: Ion channel r 94.9 0.91 2E-05 35.7 11.7 83 325-408 34-116 (156)
280 KOG3880 Predicted small molecu 94.5 0.52 1.1E-05 41.1 9.9 137 62-202 64-202 (409)
281 COG0477 ProP Permeases of the 94.2 0.17 3.7E-06 44.4 7.4 83 329-411 40-124 (338)
282 TIGR00939 2a57 Equilibrative N 93.5 0.87 1.9E-05 42.7 10.6 108 63-171 310-431 (437)
283 PF03137 OATP: Organic Anion T 92.1 0.043 9.3E-07 52.9 0.0 149 26-174 306-514 (539)
284 PF01733 Nucleoside_tran: Nucl 91.0 0.083 1.8E-06 47.1 0.6 79 332-411 186-278 (309)
285 KOG1479 Nucleoside transporter 89.9 2 4.3E-05 39.3 8.3 111 59-170 281-401 (406)
286 KOG0637 Sucrose transporter an 88.6 0.52 1.1E-05 43.5 3.7 85 282-377 32-121 (498)
287 TIGR00769 AAA ADP/ATP carrier 87.5 27 0.00058 33.3 17.1 68 123-190 276-345 (472)
288 KOG2601 Iron transporter [Inor 85.0 17 0.00036 33.2 10.7 162 28-190 30-217 (503)
289 PF01770 Folate_carrier: Reduc 82.3 9.9 0.00021 35.2 8.7 96 59-154 284-382 (412)
290 KOG2765 Predicted membrane pro 77.1 15 0.00032 33.1 7.7 25 278-302 156-180 (416)
291 PF03219 TLC: TLC ATP/ADP tran 76.5 74 0.0016 30.6 16.3 68 123-190 292-361 (491)
292 COG4262 Predicted spermidine s 76.2 60 0.0013 29.4 12.5 93 47-139 29-132 (508)
293 KOG2881 Predicted membrane pro 75.9 49 0.0011 28.2 11.9 35 337-371 249-283 (294)
294 KOG3810 Micronutrient transpor 74.4 8.1 0.00018 34.7 5.4 93 63-155 274-369 (433)
295 KOG4332 Predicted sugar transp 74.1 20 0.00043 31.1 7.4 126 62-191 284-423 (454)
296 PF06912 DUF1275: Protein of u 72.3 55 0.0012 27.1 14.2 29 150-178 164-192 (209)
297 PF01733 Nucleoside_tran: Nucl 70.8 1.1 2.3E-05 40.0 -0.6 105 65-170 187-306 (309)
298 COG5336 Uncharacterized protei 69.0 23 0.00049 25.5 5.6 39 336-374 50-89 (116)
299 KOG3626 Organic anion transpor 68.5 17 0.00036 36.4 6.7 79 26-104 393-475 (735)
300 COG5336 Uncharacterized protei 68.1 33 0.00071 24.7 6.2 37 63-99 45-82 (116)
301 PF02990 EMP70: Endomembrane p 66.2 77 0.0017 30.8 10.7 24 333-356 302-325 (521)
302 KOG3880 Predicted small molecu 66.1 13 0.00027 32.9 4.8 72 100-171 329-401 (409)
303 PF07672 MFS_Mycoplasma: Mycop 62.3 67 0.0015 27.7 8.3 97 64-163 145-254 (267)
304 COG1288 Predicted membrane pro 61.5 1.3E+02 0.0029 28.1 10.4 23 171-193 212-234 (481)
305 PF11947 DUF3464: Protein of u 59.7 28 0.0006 27.1 5.2 51 111-163 95-145 (153)
306 PRK10263 DNA translocase FtsK; 59.4 51 0.0011 35.4 8.5 22 68-89 60-81 (1355)
307 COG1268 BioY Uncharacterized c 57.4 50 0.0011 26.7 6.5 26 67-92 89-114 (184)
308 KOG1237 H+/oligopeptide sympor 57.2 71 0.0015 31.4 8.8 55 323-377 68-123 (571)
309 PRK10697 DNA-binding transcrip 54.9 43 0.00092 24.8 5.2 13 192-204 57-69 (118)
310 PF02694 UPF0060: Uncharacteri 53.8 42 0.00091 24.2 4.9 51 60-110 54-104 (107)
311 PF03547 Mem_trans: Membrane t 51.2 93 0.002 28.6 8.4 14 74-87 9-22 (385)
312 KOG3097 Predicted membrane pro 51.1 1.8E+02 0.0038 26.4 9.2 35 338-372 68-102 (390)
313 PF02632 BioY: BioY family; I 48.7 87 0.0019 24.4 6.5 40 67-106 60-99 (148)
314 PRK02237 hypothetical protein; 47.1 77 0.0017 23.0 5.3 51 60-110 56-106 (109)
315 PF07857 DUF1632: CEO family ( 46.9 1.9E+02 0.0041 25.0 8.9 20 293-312 189-208 (254)
316 PF11151 DUF2929: Protein of u 46.6 73 0.0016 20.0 6.0 45 157-201 11-55 (57)
317 TIGR02230 ATPase_gene1 F0F1-AT 43.0 1.1E+02 0.0023 22.0 5.5 32 341-372 56-87 (100)
318 COG4769 Predicted membrane pro 42.6 41 0.00088 26.4 3.7 51 69-125 82-132 (181)
319 PF02694 UPF0060: Uncharacteri 41.7 51 0.0011 23.7 3.8 49 328-376 54-102 (107)
320 PRK03612 spermidine synthase; 40.6 3.6E+02 0.0077 26.3 12.5 31 324-354 46-76 (521)
321 TIGR00844 c_cpa1 na(+)/h(+) an 39.2 4.5E+02 0.0098 27.1 20.8 37 153-189 106-142 (810)
322 KOG1278 Endosomal membrane pro 37.5 42 0.00091 32.1 3.6 30 325-354 356-385 (628)
323 PF11298 DUF3099: Protein of u 36.9 1E+02 0.0022 20.6 4.4 60 83-145 10-69 (73)
324 PF13000 Acatn: Acetyl-coenzym 35.6 1.2E+02 0.0027 29.0 6.4 48 131-178 424-471 (544)
325 PRK02237 hypothetical protein; 33.7 97 0.0021 22.5 4.2 48 328-375 56-103 (109)
326 PRK10599 calcium/sodium:proton 33.1 3.9E+02 0.0085 24.6 9.2 30 37-66 234-263 (366)
327 PLN02332 membrane bound O-acyl 31.5 4.1E+02 0.0088 25.5 9.3 33 88-120 339-371 (465)
328 COG3202 ATP/ADP translocase [E 31.4 4.8E+02 0.011 25.1 15.4 148 43-191 164-365 (509)
329 KOG3574 Acetyl-CoA transporter 30.5 1.1E+02 0.0023 28.4 4.9 133 43-179 283-436 (510)
330 PF04024 PspC: PspC domain; I 29.5 1.3E+02 0.0028 19.2 3.9 26 177-202 31-60 (61)
331 KOG4830 Predicted sugar transp 29.3 78 0.0017 27.4 3.7 62 32-93 24-94 (412)
332 TIGR02978 phageshock_pspC phag 28.8 1.9E+02 0.0041 21.6 5.2 13 192-204 52-64 (121)
333 PRK10263 DNA translocase FtsK; 28.0 8.6E+02 0.019 26.9 12.1 38 338-375 141-178 (1355)
334 PF10785 NADH-u_ox-rdase: NADH 27.2 2.2E+02 0.0047 19.8 5.4 42 72-113 30-78 (86)
335 COG2233 UraA Xanthine/uracil p 27.2 1.1E+02 0.0024 28.8 4.6 79 27-107 18-96 (451)
336 PF07556 DUF1538: Protein of u 26.2 3.8E+02 0.0082 22.4 7.0 86 111-200 60-148 (212)
337 TIGR00801 ncs2 uracil-xanthine 25.9 3.4E+02 0.0075 25.4 7.8 97 52-150 30-132 (415)
338 COG2962 RarD Predicted permeas 25.2 4.8E+02 0.01 23.0 10.1 24 350-373 119-142 (293)
339 PF11023 DUF2614: Protein of u 24.7 2.9E+02 0.0062 20.3 6.2 9 353-361 6-14 (114)
340 TIGR01667 YCCS_YHJK integral m 24.2 6.5E+02 0.014 25.7 9.6 54 77-130 40-98 (701)
341 PF06912 DUF1275: Protein of u 24.1 4.1E+02 0.0089 21.9 9.7 41 335-375 53-96 (209)
342 COG4721 ABC-type cobalt transp 23.7 3.8E+02 0.0082 21.3 10.9 147 26-187 12-160 (192)
343 PRK11588 hypothetical protein; 23.4 6.9E+02 0.015 24.2 16.1 49 80-128 136-186 (506)
344 PF13536 EmrE: Multidrug resis 22.6 3E+02 0.0066 19.9 6.5 20 353-372 84-103 (113)
345 PF04281 Tom22: Mitochondrial 22.5 2E+02 0.0043 22.1 4.4 26 137-162 60-85 (137)
346 PF08566 Pam17: Mitochondrial 22.5 4.1E+02 0.0089 21.3 6.9 31 52-82 69-101 (173)
347 TIGR02230 ATPase_gene1 F0F1-AT 22.4 3E+02 0.0066 19.7 7.5 36 151-186 46-85 (100)
348 COG1230 CzcD Co/Zn/Cd efflux s 22.3 5.6E+02 0.012 22.8 11.3 79 22-106 22-103 (296)
349 PF04550 Phage_holin_2: Phage 22.0 1.6E+02 0.0036 20.4 3.5 39 105-143 23-62 (89)
350 PF00854 PTR2: POT family; In 21.9 3.1E+02 0.0068 25.0 6.7 63 48-110 55-122 (372)
351 PF11947 DUF3464: Protein of u 21.7 2.9E+02 0.0064 21.6 5.3 15 350-364 56-70 (153)
352 PF07760 DUF1616: Protein of u 21.6 3.5E+02 0.0076 23.8 6.5 57 116-172 22-78 (287)
353 KOG1484 Putative Zn2+ transpor 21.4 6.1E+02 0.013 22.9 9.6 32 154-186 214-245 (354)
354 PF03596 Cad: Cadmium resistan 21.0 2E+02 0.0043 23.6 4.5 47 42-91 111-166 (191)
355 PF07456 Hpre_diP_synt_I: Hept 20.7 3.7E+02 0.0081 20.9 5.7 50 67-122 68-117 (148)
356 PF01528 Herpes_glycop: Herpes 20.5 2.7E+02 0.0057 25.7 5.6 14 131-144 253-266 (374)
357 PF12273 RCR: Chitin synthesis 20.4 44 0.00094 25.3 0.6 16 178-193 1-16 (130)
358 PF07168 Ureide_permease: Urei 20.4 3.6E+02 0.0079 24.0 6.0 21 347-367 293-313 (336)
No 1
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.7e-40 Score=320.25 Aligned_cols=400 Identities=26% Similarity=0.464 Sum_probs=306.5
Q ss_pred HhhhcCCCccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhH
Q 015136 13 ALTSAGFGKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKG 92 (412)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~ 92 (412)
..++.+.++++|.++++++++.+..+++...++..+|.+.+++|++..+.+++.+++.++++++++++|+++||+|||+.
T Consensus 155 ~l~~~~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~ 234 (742)
T TIGR01299 155 IIQECGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQC 234 (742)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 34455667888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015136 93 FLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIV 171 (412)
Q Consensus 93 ~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 171 (412)
++++.++.+++.++++++++++.++++|++.|++.|.. +...++++|++|+++|++.+++..+++.+|.++++.++..+
T Consensus 235 lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~i 314 (742)
T TIGR01299 235 LLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAI 314 (742)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 88999999999999999999999999999999999988776
Q ss_pred Hhc-------------CChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCcc---c
Q 015136 172 MIT-------------LNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGML---V 235 (412)
Q Consensus 172 ~~~-------------~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 235 (412)
... .+||+.+++.+++.++.++..+++||+|+|+..+++.+++.+.++++...+......... .
T Consensus 315 l~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~ 394 (742)
T TIGR01299 315 IPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSV 394 (742)
T ss_pred HHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHH
Confidence 643 358999998888887777778889999999999999999999998887655432111000 0
Q ss_pred cccCCCCCcc--cC-CCCCCCcccchhhhh-hhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 015136 236 SDATSRPDEE--LA-PPDNTPLLTSSRIRI-TKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSST 311 (412)
Q Consensus 236 ~~~~~~~~~~--~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (412)
.+.+...+.. .+ +.+......+...+. ......+.+++.++++++++.++.+++.+++..+.+|++..|.|.+.+.
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~ 474 (742)
T TIGR01299 395 NHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKH 474 (742)
T ss_pred HHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000 00 000000000000000 0111122357778999999999999999999999999999999976432
Q ss_pred ccc---------------------------------c------c------------------------------------
Q 015136 312 QSK---------------------------------C------G------------------------------------ 316 (412)
Q Consensus 312 ~~~---------------------------------~------~------------------------------------ 316 (412)
... . +
T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 554 (742)
T TIGR01299 475 LQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDT 554 (742)
T ss_pred HHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhh
Confidence 100 0 0
Q ss_pred --------------------cccccccCCC---------CcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHH
Q 015136 317 --------------------TTLTVSQSMH---------DSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLIL 367 (412)
Q Consensus 317 --------------------~~~~~~~~~~---------~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~ 367 (412)
+.++...|.+ .........+..++.++|.+++|+++||+|||++++++.++
T Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~l 634 (742)
T TIGR01299 555 LFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVL 634 (742)
T ss_pred hccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 0000000000 01234456677789999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 368 VFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 368 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
.+++.+++.+.++....+++.++.+++.++.++...++++|++|+
T Consensus 635 sai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt 679 (742)
T TIGR01299 635 SCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPS 679 (742)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 999988888766666666666677777788889999999999995
No 2
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.4e-37 Score=261.64 Aligned_cols=394 Identities=40% Similarity=0.664 Sum_probs=331.3
Q ss_pred HHHHhhhcCCCccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015136 10 VDEALTSAGFGKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGR 89 (412)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr 89 (412)
.++.....++.+.+|........+++...+.....+.+.|.+.+..|.+..+..++....+.|..+++..+|..+|++||
T Consensus 63 v~ea~~aigfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~gr 142 (528)
T KOG0253|consen 63 VDEAMNAIGFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGR 142 (528)
T ss_pred ehhhhhhcCcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhc
Confidence 34556667788999999999999999999988888999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 015136 90 KKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAW 169 (412)
Q Consensus 90 r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 169 (412)
|+.+........+..++.+.++|+..+++.|.+.|+|.|+.|...++-.|..|..+|+..+-.. ..+.+|.++...+..
T Consensus 143 r~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law 221 (528)
T KOG0253|consen 143 RKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAW 221 (528)
T ss_pred chhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888888889999999999888777 999999999999999
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCC
Q 015136 170 IVMITLNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPP 249 (412)
Q Consensus 170 ~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (412)
....++||||.....+.+..+.....+++||+|++...+++++++.+.++++...|....+..........+.++++...
T Consensus 222 ~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~ 301 (528)
T KOG0253|consen 222 GVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDL 301 (528)
T ss_pred HHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhch
Confidence 99999999999999998888888888999999999999999999999999999999887776554443322222222221
Q ss_pred CCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccc------cccc-
Q 015136 250 DNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTT------LTVS- 322 (412)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~- 322 (412)
++.+. +-.++...+..+++.++.++.+++.+..++.+.+.||+.......+.+....|+.+ ..+.
T Consensus 302 ~~~~~--------~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~ 373 (528)
T KOG0253|consen 302 DDSKS--------SAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETR 373 (528)
T ss_pred hhhhh--------ccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhh
Confidence 11111 01122233677889999999999999999999999999988887777665544322 1111
Q ss_pred --cCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhH
Q 015136 323 --QSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFT 400 (412)
Q Consensus 323 --~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (412)
-..+...-..-..+..+..+.|.++.+++.||+|||+.+..+.++.+++.+.+....+.....+..+..-++..+.+.
T Consensus 374 ~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fq 453 (528)
T KOG0253|consen 374 ANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQ 453 (528)
T ss_pred hcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchhe
Confidence 123334445566777889999999999999999999999999999999999998877777777788888899999999
Q ss_pred HHHhhccCCCCC
Q 015136 401 IACIFTPEQLGW 412 (412)
Q Consensus 401 ~~~~~~~e~~P~ 412 (412)
+.++|++|+||+
T Consensus 454 vaYvYtPEVyPT 465 (528)
T KOG0253|consen 454 VAYVYTPEVYPT 465 (528)
T ss_pred EEEEecCcccch
Confidence 999999999996
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.1e-35 Score=282.75 Aligned_cols=363 Identities=20% Similarity=0.297 Sum_probs=260.2
Q ss_pred hhhcCCCccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhc-----CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015136 14 LTSAGFGKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEW-----GVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYG 88 (412)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G 88 (412)
.++.+.++++++++.++.++.+.++++...++...|.+.+++ +.+..+.+++.+.+.+++.++++++|+++||+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~G 84 (502)
T TIGR00887 5 ADTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLG 84 (502)
T ss_pred hhccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 355667788888999999999999999999999999887653 345667899999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHhhcchh------HHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHH
Q 015136 89 RKKGFLGIAMITSGIGLLSAFSPN------YISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGS 161 (412)
Q Consensus 89 rr~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 161 (412)
||+++.++.++..++.++++++++ ++.++++|++.|++.|.. +....+++|++|+++|++++++.+....+|.
T Consensus 85 rr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~ 164 (502)
T TIGR00887 85 RKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGI 164 (502)
T ss_pred cHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHH
Confidence 999999999999999988888765 788999999999999998 8889999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-----------------------cCChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChH-HHHHH
Q 015136 162 IFEAALAWIVMI-----------------------TLNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTT-EARNI 217 (412)
Q Consensus 162 ~~~~~~~~~l~~-----------------------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 217 (412)
.+++.++..+.. ..+||+.+.+.+++.++..+..+++||+|+|+..+++++ ++++.
T Consensus 165 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~ 244 (502)
T TIGR00887 165 LAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASD 244 (502)
T ss_pred HHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHH
Confidence 999988876542 247999998888888877777889999999998877764 35554
Q ss_pred HHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccch----hhHHHHHHHHHHHHH
Q 015136 218 LDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSS----RLVRTTLLLWMLFFG 293 (412)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~ 293 (412)
..+....+..+. .++.++.+++ ++ . ...+++++++. +..+.++.....++.
T Consensus 245 ~~~~~~~~~~~~---------~~~~~~~~~~-~~------------~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 299 (502)
T TIGR00887 245 MSAVLQVKIEAE---------PDEVEKASTA-VE------------V---PKASWSDFFTHFFKWRHGKHLLGTAGSWFL 299 (502)
T ss_pred HHHHhccccccC---------cccccchhcc-cc------------c---hhhhHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 444432111000 0000000000 00 0 00134455432 222334444455556
Q ss_pred HHHHHHHHHHhhhcccccccccccccccccCCCCcchH------------HHHHHHHcchhhHHHHHHHHHHhhchhhHH
Q 015136 294 NSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLY------------LSVFLASLGELPGLVLAGIIVDRAGRKLSL 361 (412)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~g~~~~g~l~dr~grr~~l 361 (412)
..+.+|+...+.|.+.++. |+++...+ .......++.+++.+++++++||+|||+++
T Consensus 300 ~~~~~y~~~~~~p~i~~~~-----------G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l 368 (502)
T TIGR00887 300 LDIAFYGVNLNQKVILSAI-----------GYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ 368 (502)
T ss_pred HHHHHHccccccHHHHHHH-----------cCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH
Confidence 6677888888888776443 34332211 123344556777889999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 362 TIMLILVFICILPLAMLQS----NILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 362 ~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
+++..+.+++.+++....+ ........+...++..+..+..+.+.+|++|+
T Consensus 369 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~ 423 (502)
T TIGR00887 369 LMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPT 423 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCch
Confidence 8888887777666654221 11111112222222344567888899999995
No 4
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-35 Score=256.13 Aligned_cols=344 Identities=19% Similarity=0.232 Sum_probs=276.3
Q ss_pred CCccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHH
Q 015136 19 FGKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAM 98 (412)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~ 98 (412)
.+++|+.+++.+++++...++.+..++...|.+.++.++|.+|.|.+.+.+++.|.++-++.|.++||.+.|+.+.+|++
T Consensus 23 y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLi 102 (448)
T COG2271 23 YKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHH
Confidence 46788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHH--HHHHhcC
Q 015136 99 ITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALA--WIVMITL 175 (412)
Q Consensus 99 ~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~l~~~~ 175 (412)
+.++..++++++++.+.+.+..++.|..+|+. |.+...+.+|+|+++||+..++++++-++|..+.|++. +.+..+.
T Consensus 103 lsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~ 182 (448)
T COG2271 103 LSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG 182 (448)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999998 99999999999999999999999999999999999999 8898889
Q ss_pred ChHHHHHHHHHHHHHH-HHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCc
Q 015136 176 NWRWLLALSSIPSFAV-LLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPL 254 (412)
Q Consensus 176 ~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (412)
+||..|++.++++++. ++.++..+|+|+..-. ++.+|.++. +.+.+.++++.
T Consensus 183 ~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GL-P~ie~~~~d-----------------------~~e~~~~~~~~--- 235 (448)
T COG2271 183 GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGL-PPIEEYRGD-----------------------PLEIYEEEKEN--- 235 (448)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhCCCccccCC-CCHHHhhcC-----------------------chhhhhhhccC---
Confidence 9999999999888876 5567778888763211 111111000 00000000000
Q ss_pred ccchhhhhhhhcccccchhhccc--hhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHH
Q 015136 255 LTSSRIRITKLKSGFSSFLLLFS--SRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYL 332 (412)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (412)
++. +.++.+. .-..+..+..++..+.....-|++..|.|.|+.+. .|++..++..
T Consensus 236 ------------~~l-s~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~----------k~~s~~~a~~ 292 (448)
T COG2271 236 ------------EGL-TAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEV----------KGFSLVKANW 292 (448)
T ss_pred ------------CCc-cHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh----------cCCCHHHHHH
Confidence 000 1222221 12234566777777788888999999999888544 6899999999
Q ss_pred HHHHHHcchhhHHHHHHHHHHhh--chhhHHH-HHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHhhHhHHHHhhcc
Q 015136 333 SVFLASLGELPGLVLAGIIVDRA--GRKLSLT-IMLILVFICILPLAMLQSN--ILITGLLVGARMFAFGAFTIACIFTP 407 (412)
Q Consensus 333 ~~~~~~~~~~~g~~~~g~l~dr~--grr~~l~-~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (412)
..+.+-+++++|++++|+++||+ |||.... +.++...++.+.+...++. ....++++..|+...+..-+.-....
T Consensus 293 a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~ 372 (448)
T COG2271 293 AISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAA 372 (448)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHh
Confidence 99999999999999999999995 6665554 4555555555555554443 66677788888888888777788888
Q ss_pred CCCCC
Q 015136 408 EQLGW 412 (412)
Q Consensus 408 e~~P~ 412 (412)
|+.|.
T Consensus 373 e~~pK 377 (448)
T COG2271 373 EFVPK 377 (448)
T ss_pred ccccH
Confidence 88773
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=9.2e-35 Score=269.40 Aligned_cols=353 Identities=16% Similarity=0.201 Sum_probs=247.9
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
+|.+|..+..+++.++.++.++...+...|.+.+|+|+|+++.|++.+++.+++.+++++.|+++||+|||+++..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~ 82 (412)
T TIGR02332 3 KKLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL 82 (412)
T ss_pred eeehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH
Confidence 35678888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-----
Q 015136 100 TSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI----- 173 (412)
Q Consensus 100 ~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----- 173 (412)
.+++.+++++++|++.+++.|++.|++.+.. +....++.|++|+++|++++++++.+.++|..+++++++.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999998 8778889999999999999999999999999999999998874
Q ss_pred -cCChHHHHHHHHHHHHHH-HHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCC
Q 015136 174 -TLNWRWLLALSSIPSFAV-LLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDN 251 (412)
Q Consensus 174 -~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (412)
..|||+.|++.+++.++. .+.++++||+|+... .-.++.++...+..+.+..+.+ +.+ ...+
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~--~l~~~~~~~~~~~~~~~~~~~~----------~~~---~~~~- 226 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAK--WLDEEDKKALKEMIDNDQLTLE----------QPE---GAFA- 226 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhccCCCcccCC--CCCHHHHHHHHHHHHhcccccc----------ccc---cccc-
Confidence 369999999988877665 445667788875210 0011111111111110000000 000 0000
Q ss_pred CCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchH
Q 015136 252 TPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLY 331 (412)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (412)
++... ....+++++++ ..+.....+++....+++...|.|.++++.. .+.++.+++
T Consensus 227 ~~~~~-----------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---------~~~s~~~~~ 282 (412)
T TIGR02332 227 HAAMP-----------QRSMLREIFTP----AIMLYTLAYFCLTNTLSAINIWTPQILQSFN---------QGSSNIMIG 282 (412)
T ss_pred ccccc-----------HHHHHHHhcCh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCCcHHHhH
Confidence 00000 00023333332 2344555556666777888888998885421 246677888
Q ss_pred HHHHHHHcchhhHHHHHHHHHHhhchhhH-HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCC
Q 015136 332 LSVFLASLGELPGLVLAGIIVDRAGRKLS-LTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQL 410 (412)
Q Consensus 332 ~~~~~~~~~~~~g~~~~g~l~dr~grr~~-l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 410 (412)
.......++.++|+++.|+++||+++|+. ......+..++.+......+.........+.+++.....+..+....|.+
T Consensus 283 ~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 362 (412)
T TIGR02332 283 LLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSI 362 (412)
T ss_pred HHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhccccc
Confidence 88899999999999999999999997764 34444444443332222222222222222223333333344555666766
Q ss_pred CC
Q 015136 411 GW 412 (412)
Q Consensus 411 P~ 412 (412)
|+
T Consensus 363 ~~ 364 (412)
T TIGR02332 363 SL 364 (412)
T ss_pred ch
Confidence 63
No 6
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=9e-34 Score=263.53 Aligned_cols=328 Identities=20% Similarity=0.271 Sum_probs=258.1
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
++++|.++.+.++..+.++++....+...|.+.+++|.|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 45788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 015136 100 TSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWR 178 (412)
Q Consensus 100 ~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 178 (412)
..++.+++.++++++.+++.|++.|++.+.. +...+++.|++|+++|++++++.+.+..+|..+++.++..+.+..+||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 169 (406)
T PRK11551 90 FGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWR 169 (406)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHH
Confidence 9999998999999999999999999999887 888899999999999999999999999999999999999888889999
Q ss_pred HHHHHHHHHHHHHH-HHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccc
Q 015136 179 WLLALSSIPSFAVL-LLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTS 257 (412)
Q Consensus 179 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (412)
+.|++.+++.++.. +...++||+|++..++++.++.++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----------------------------------------- 208 (406)
T PRK11551 170 HIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAP----------------------------------------- 208 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhh-----------------------------------------
Confidence 99998876655543 345567887653221111000000
Q ss_pred hhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHH
Q 015136 258 SRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLA 337 (412)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (412)
..+..++++..+.....+...+......+....+.|.+.++ .|.++.+.+......
T Consensus 209 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-----------~g~s~~~~~~~~~~~ 264 (406)
T PRK11551 209 -------------VLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-----------QGLSRSQAGLVQIAF 264 (406)
T ss_pred -------------hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCChhhhhHHHHHH
Confidence 00001111111122222233333344555666667766633 468888889999999
Q ss_pred HcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 338 SLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 338 ~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
.++.++++++.|++.||+|||+.+..+.+...++.+.+...++.+...+..++.+++..+..+..+++..|.+|+
T Consensus 265 ~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 339 (406)
T PRK11551 265 NIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPT 339 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcch
Confidence 999999999999999999999998887777777766666555555555666667777777788888888888874
No 7
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=3.4e-33 Score=259.13 Aligned_cols=358 Identities=25% Similarity=0.363 Sum_probs=263.1
Q ss_pred CCCccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHH
Q 015136 18 GFGKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIA 97 (412)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~ 97 (412)
+.++++|+.+....+..+..+.+....++..|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+.+..+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 89 (398)
T TIGR00895 10 PLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSI 89 (398)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHH
Confidence 34566777777777788888888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015136 98 MITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN 176 (412)
Q Consensus 98 ~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 176 (412)
++.+++.++..+.++++.+++.|++.|++.+.. +...+++.|++|+++|++++++...+..+|..+++.+++.+.+..+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g 169 (398)
T TIGR00895 90 LLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG 169 (398)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999988 8888999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHH-HHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcc
Q 015136 177 WRWLLALSSIPSFAV-LLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLL 255 (412)
Q Consensus 177 w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (412)
||+.|++.++..++. .+...++||++++..++ +.++.++..++.......+.+ ++.+++. .+.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~-- 234 (398)
T TIGR00895 170 WRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQ---------SALPEQK---ATQG-- 234 (398)
T ss_pred ceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhcccccc---------ccccccc---cccc--
Confidence 999999886555444 45566788887654433 223333322222211110000 0000000 0000
Q ss_pred cchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHH
Q 015136 256 TSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVF 335 (412)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (412)
.. ....+.+++++..+.....+...+.....++....+.|.+.+ +.|.++.+.+....
T Consensus 235 --------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~ 292 (398)
T TIGR00895 235 --------TK---RSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMV-----------ELGFSLSLAATGGA 292 (398)
T ss_pred --------hh---hHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HcCCCHHHHHHHHH
Confidence 00 002223344444444444555555555666666666774442 24678888889999
Q ss_pred HHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 336 LASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 336 ~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
...++.++++++.++++||++||+...........+.+......+........++.+++.+...+...++..|.+|+
T Consensus 293 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 369 (398)
T TIGR00895 293 LFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPT 369 (398)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCH
Confidence 99999999999999999999998554444433333333333244555566677788888888899999999999884
No 8
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.8e-33 Score=266.71 Aligned_cols=333 Identities=18% Similarity=0.208 Sum_probs=238.3
Q ss_pred HHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcch-hHH-----HHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHH
Q 015136 24 YLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSA-ESL-----LSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIA 97 (412)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~~-----~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~ 97 (412)
+..+...+++.++++++...++...|.+.++++.+.+. .++ +.++..+++.+++++.|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 34666778899999999999999999999999754432 222 247788999999999999999999999999999
Q ss_pred HHHHHHHHHhhcchhHHH--------HHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHH
Q 015136 98 MITSGIGLLSAFSPNYIS--------LVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALA 168 (412)
Q Consensus 98 ~~~~i~~~~~~~~~~~~~--------~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 168 (412)
++++++++++++++|++. +++.|+++|++.|.. +...++++|++|+++||++.++...+..+|..+++.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875 789999999999998 88889999999999999999999988888888888776
Q ss_pred HHHH--------hcCChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCC
Q 015136 169 WIVM--------ITLNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATS 240 (412)
Q Consensus 169 ~~l~--------~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (412)
..+. .++|||+.|++.+++.++.++....+||+|++...+++.++. +.+
T Consensus 175 ~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~----------~~~------------- 231 (490)
T PRK10642 175 VLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQG----------DRE------------- 231 (490)
T ss_pred HHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhh----------ccc-------------
Confidence 5543 257999999998766665555566789988764322111000 000
Q ss_pred CCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccc
Q 015136 241 RPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLT 320 (412)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (412)
+.. +. +..++++++++ .++.........+.....+|+...+.|.+.++.
T Consensus 232 ~~~-------~~---------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-------- 280 (490)
T PRK10642 232 GLQ-------DG---------------PKVSFKEIATK-HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHN-------- 280 (490)
T ss_pred ccc-------cc---------------ccCCHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 000 00 00033344433 223333333344455677788888888777432
Q ss_pred cccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH-HHh--hhhhHHHHHHHHHHHHHHhh
Q 015136 321 VSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILP-LAM--LQSNILITGLLVGARMFAFG 397 (412)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~-l~~--~~~~~~~~~~~~~~~~~~~~ 397 (412)
.|.+............++.+++.++.|+++||+|||+.+..+.++..++.+. +.. ..+.....+..++.+++.+.
T Consensus 281 --~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 358 (490)
T PRK10642 281 --LHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNC 358 (490)
T ss_pred --cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 3566666677777778888999999999999999999888777644433322 221 22233334444555555555
Q ss_pred HhHHHHhhccCCCCC
Q 015136 398 AFTIACIFTPEQLGW 412 (412)
Q Consensus 398 ~~~~~~~~~~e~~P~ 412 (412)
..+....+.+|++|+
T Consensus 359 ~~g~~~~~~~~~~p~ 373 (490)
T PRK10642 359 FTGVMASTLPAMFPT 373 (490)
T ss_pred HHHHHHHHHHHHCCC
Confidence 666777778888885
No 9
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.4e-34 Score=250.33 Aligned_cols=320 Identities=23% Similarity=0.283 Sum_probs=252.9
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
++..+..++.+.++.|..+.........+|++.+|+|+|..+.|+..|.|.+++.+++|+...+.||+.||++++....+
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~l 87 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLAL 87 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH
Confidence 34556677778888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 015136 100 TSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWR 178 (412)
Q Consensus 100 ~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 178 (412)
+.++.+++++++|++.++++|++.|++.|.. +...++..+..|+++|++++++...+..++..+|.+++.++.+.+|||
T Consensus 88 Fi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR 167 (394)
T COG2814 88 FIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWR 167 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHH
Confidence 9999999999999999999999999999998 889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccc
Q 015136 179 WLLALSSIPSFAVLL-LYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTS 257 (412)
Q Consensus 179 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (412)
+.|++.+.++++..+ .+..+| |+... +.+..+.
T Consensus 168 ~~F~~ia~l~ll~~~~~~~~lP--~~~~~-~~~~~~~------------------------------------------- 201 (394)
T COG2814 168 ATFLAIAVLALLALLLLWKLLP--PSEIS-GSLPGPL------------------------------------------- 201 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC--CccCC-CCCCcch-------------------------------------------
Confidence 999999988887754 466677 21000 0000000
Q ss_pred hhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHH
Q 015136 258 SRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLA 337 (412)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (412)
.+..++++++..+.........+. ..|....|...+.. +..|++....++.+..+
T Consensus 202 ------------~~~~~~l~~p~v~~~l~~t~l~~~---g~F~~ftYi~P~L~----------~v~g~s~~~vs~~Ll~~ 256 (394)
T COG2814 202 ------------RTLLRLLRRPGVLLGLLATFLFMT---GHFALYTYIRPFLE----------SVAGFSVSAVSLVLLAF 256 (394)
T ss_pred ------------hHHHHHhcCchHHHHHHHHHHHHc---chhhhHHhHHHHHH----------HccCCCHhHHHHHHHHH
Confidence 012223344444444444444443 33333333433332 34579999999999999
Q ss_pred HcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 338 SLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSN-ILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 338 ~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
+++.++|+.++|++.|| +.|+.+.....+.++..+.+.+..+. +......++.++.............++..|
T Consensus 257 Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p 330 (394)
T COG2814 257 GIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAP 330 (394)
T ss_pred HHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCC
Confidence 99999999999999999 88888888888888888887764444 444455555665555555555555555444
No 10
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=2.2e-33 Score=261.01 Aligned_cols=350 Identities=19% Similarity=0.266 Sum_probs=251.8
Q ss_pred CCccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHH
Q 015136 19 FGKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAM 98 (412)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~ 98 (412)
.++++|+.+..++++++.++++....++..|.+.+++|.|+++.+++.+++.++..+++++.|+++||+|||++++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 45678888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-
Q 015136 99 ITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN- 176 (412)
Q Consensus 99 ~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~- 176 (412)
+.+++.+++.++++++.+++.|++.|++.+.. +...+++.|++|+++|+++.++.+.+..+|..+++.+++.+.+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 165 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD 165 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999988 8888999999999999999999999999999999999999988766
Q ss_pred -hHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcc
Q 015136 177 -WRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLL 255 (412)
Q Consensus 177 -w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (412)
||+.|.+.++..++..+.....||++++..+++++++.++..++..+. + ... + ...
T Consensus 166 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------------~~~-~-----~~~ 222 (405)
T TIGR00891 166 GWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGG---E--------------HRI-A-----NIV 222 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhcc---c--------------hhh-h-----hhh
Confidence 999998877666655555666788765332211111111111100000 0 000 0 000
Q ss_pred cchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHH
Q 015136 256 TSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVF 335 (412)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (412)
+ +.....++.. .+.++.....................+.|.+.++ +.|.++.+.+....
T Consensus 223 ~----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~g~s~~~~~~~~~ 281 (405)
T TIGR00891 223 M----------TLAAAMVQSA-GKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKA----------DLGLSPHTVANIVV 281 (405)
T ss_pred h----------hhhHHhhhhh-hhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH----------HhCCCHHHHHHHHH
Confidence 0 0000001000 1111112222222222233333444455555432 34688888899999
Q ss_pred HHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHH-hhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 336 LASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLA-MLQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 336 ~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
...++.++++++.|++.||+|||+.+..+..+..+....+. ...+.+...+..++.+++..+..+..+.++.|.+|+
T Consensus 282 ~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (405)
T TIGR00891 282 FSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPT 359 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCc
Confidence 99999999999999999999999998887776544333322 233333444444556666666777888888888874
No 11
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=3.8e-33 Score=260.66 Aligned_cols=324 Identities=17% Similarity=0.188 Sum_probs=227.3
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcC---CCcchhHHHHH---HHHHHHHHHHHHHHHHHhhhcchhHH
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWG---VSPSAESLLST---VVFAGNLVGVYLWGLLSDNYGRKKGF 93 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~~~~~s---~~~~~~~i~~~~~g~l~dr~Grr~~~ 93 (412)
++++++.+...+++.+.++++...++...|.+.++++ .+..+.+...+ ..+++..++++++|+++||+|||+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l 96 (432)
T PRK10406 17 TRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM 96 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 3455666777788899999999999999999999985 45554444444 44455559999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhHH--------HHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHH
Q 015136 94 LGIAMITSGIGLLSAFSPNYI--------SLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFE 164 (412)
Q Consensus 94 ~~~~~~~~i~~~~~~~~~~~~--------~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~ 164 (412)
..+.++++++++++++++++. .+++.|+++|++.|.. +...++++|++|+++|+++.++...+...|.+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~ 176 (432)
T PRK10406 97 LISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLA 176 (432)
T ss_pred HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHH
Confidence 999999999999999988764 5889999999999998 8889999999999999999999998888888888
Q ss_pred HHHHHHHH--------hcCChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCcccc
Q 015136 165 AALAWIVM--------ITLNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVS 236 (412)
Q Consensus 165 ~~~~~~l~--------~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (412)
+.+...+. +.+|||+.|++.+++.++........||+|++..++ + +
T Consensus 177 ~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~------~---------~----------- 230 (432)
T PRK10406 177 LLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRA------L---------K----------- 230 (432)
T ss_pred HHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh------h---------c-----------
Confidence 87765543 257999999988877766554444556654321000 0 0
Q ss_pred ccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc
Q 015136 237 DATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCG 316 (412)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (412)
+..+++++++.+.. ........+.....+|+...|.|.+..+.
T Consensus 231 -------------------------------~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~lp~~l~~~---- 273 (432)
T PRK10406 231 -------------------------------EAGSLKGLWRNRRA--FIMVLGFTAAGSLCFYTFTTYMQKYLVNT---- 273 (432)
T ss_pred -------------------------------ccccHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 00033344443221 12222222334566777788888776432
Q ss_pred cccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHH--h--hhhhHHHHHHHHHHH
Q 015136 317 TTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLA--M--LQSNILITGLLVGAR 392 (412)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~--~--~~~~~~~~~~~~~~~ 392 (412)
.|.+..+.+.......+...++.++.|+++||++||+.+.++.++.++....+. . ..+......+..+..
T Consensus 274 ------~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (432)
T PRK10406 274 ------AGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCAL 347 (432)
T ss_pred ------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 467777777777777778888899999999999999888776655443332221 1 112222222222222
Q ss_pred HHHhhHhHHHHhhccCCCCC
Q 015136 393 MFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 393 ~~~~~~~~~~~~~~~e~~P~ 412 (412)
+..+...+..+.+.+|.+|+
T Consensus 348 ~~~~~~~~~~~~~~~e~fp~ 367 (432)
T PRK10406 348 LIVSFYTSISGILKAEMFPA 367 (432)
T ss_pred HHHHHHHHHHHHHHHHHCCC
Confidence 33333445677888999985
No 12
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.2e-34 Score=257.67 Aligned_cols=361 Identities=22% Similarity=0.323 Sum_probs=261.6
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhh--------hhhhhcCC--Ccc----hhHHHHHHHHHHHHHHHHHHHHHHh
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGP--------AVKSEWGV--SPS----AESLLSTVVFAGNLVGVYLWGLLSD 85 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~--s~~----~~~~~~s~~~~~~~i~~~~~g~l~d 85 (412)
+++.........++.+..++.....+...+ .+.+.+|. +++ ..+.+.+++.+|.++|++..++++|
T Consensus 6 t~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~ 85 (485)
T KOG0569|consen 6 TRRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLAD 85 (485)
T ss_pred cHHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555555666666555554432 34455663 332 2477889999999999999999999
Q ss_pred hhcchhHHHHHHHHHHHHHHHhhc---chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHH
Q 015136 86 NYGRKKGFLGIAMITSGIGLLSAF---SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGS 161 (412)
Q Consensus 86 r~Grr~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 161 (412)
|+|||..+.++.++..++.+++.+ .+++++++++|++.|+..|.. ...+.++.|..|++.||......+.+..+|.
T Consensus 86 ~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ 165 (485)
T KOG0569|consen 86 RFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGI 165 (485)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHH
Confidence 999999999999988888876654 578999999999999999998 8888999999999999999999999999999
Q ss_pred HHHHHHHHH--HHhcCChHHHHHHHHHHHHHHHHHHHhccCCchhhhh-cCChHHHHHHHHHHHHhhCCCCCCCcccccc
Q 015136 162 IFEAALAWI--VMITLNWRWLLALSSIPSFAVLLLYSLAPESPRYLNV-KGRTTEARNILDKIALLNKAKLPNGMLVSDA 238 (412)
Q Consensus 162 ~~~~~~~~~--l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (412)
.++..++.. +.+...|++.+....+++++.++.+.++||+|+|+.. +++++++++.++.+++.++.+.+.++...+.
T Consensus 166 ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~ 245 (485)
T KOG0569|consen 166 LLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREI 245 (485)
T ss_pred HHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHH
Confidence 999776543 3345569999999999999999999999999999987 8999999999999987655332222111111
Q ss_pred CCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHH-HHHHHHHHHHHHHH-HHHHHHHhhhcccccccccc
Q 015136 239 TSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVR-TTLLLWMLFFGNSF-TYYGIILMTSKLSSTQSKCG 316 (412)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 316 (412)
+++.. .+.+..+++++++++..| ...+.+...+...+ +.+....+...++.
T Consensus 246 ~~~~~---------------------~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~------ 298 (485)
T KOG0569|consen 246 EEEEL---------------------EKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFK------ 298 (485)
T ss_pred HHhcc---------------------ccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHH------
Confidence 11100 001222677777754433 33344333333222 22333344444442
Q ss_pred cccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh---hhh---hHHH---HHH
Q 015136 317 TTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAM---LQS---NILI---TGL 387 (412)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~---~~~---~~~~---~~~ 387 (412)
+.|+++..+.+.....++..++.++++.++.||.|||++++.+..++.++.+.+.. ..+ .|.. ++.
T Consensus 299 -----~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~ 373 (485)
T KOG0569|consen 299 -----TAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAA 373 (485)
T ss_pred -----HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 34789999999999999999999999999999999999999999999998888775 111 1111 222
Q ss_pred HH-HHHHHHhhHhHHHHhhccCCCCC
Q 015136 388 LV-GARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 388 ~~-~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
.+ ....+..|..|+.+.+.+|++|+
T Consensus 374 ~~~~~~~f~~G~gpi~~fi~aELf~~ 399 (485)
T KOG0569|consen 374 IFLFIISFAIGPGPIPWFIGAELFPQ 399 (485)
T ss_pred HHHHHHhhhcCCCchhHHHHHHhCCc
Confidence 22 23334455679999999999996
No 13
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=5.1e-33 Score=265.64 Aligned_cols=325 Identities=34% Similarity=0.589 Sum_probs=253.4
Q ss_pred hhhhhhhhhcCCC---cchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 015136 46 FIGPAVKSEWGVS---PSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGL 122 (412)
Q Consensus 46 ~~~~~~~~~~~~s---~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 122 (412)
+..|.+.+|+|++ +.+.++..+++.++..+++++.|+++||+|||++++++.++.+++.++.+++++++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 5678999999999 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhccCC
Q 015136 123 VGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSLAPES 201 (412)
Q Consensus 123 ~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 201 (412)
.|++.+.. +...+++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.+++.+++.++..+..+++||+
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~~~es 266 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWFVPES 266 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999997 8889999999999999999999999999999999998877643 9999999998888777777889999
Q ss_pred chhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchh-h
Q 015136 202 PRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSR-L 280 (412)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~ 280 (412)
|+|+..+++.+++.+..++..+.+......+....+ .+++ .+.+.+..+++++++.+ .
T Consensus 267 p~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~----~~~~-----------------~~~~~~~~~~~~l~~~~~~ 325 (505)
T TIGR00898 267 PRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLS----LEKD-----------------LSSSKKQYSFLDLFRTPNL 325 (505)
T ss_pred hHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhh----hhhh-----------------hhhccCCCcHHHHhCChHH
Confidence 999998998888888877776555432111000000 0000 00000012455666544 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhH
Q 015136 281 VRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLS 360 (412)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~ 360 (412)
++..+..+..++.....+|+...+.+.+. .+ ........++..+++.++.+++.||+|||+.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~---~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~ 387 (505)
T TIGR00898 326 RKTTLCLMMLWFTTAFSYYGLVLDLGNLG---------------GN---IYLDLFISGLVELPAKLITLLLIDRLGRRYT 387 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccC---------------CC---hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 44445555566666677777666655332 22 3445556678889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 361 LTIMLILVFICILPLAMLQSN--ILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 361 l~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
+.++.++.+++.+++.+.++. +......++.+++..+.++..+++.+|++|+
T Consensus 388 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 441 (505)
T TIGR00898 388 MAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPT 441 (505)
T ss_pred HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccH
Confidence 999999888888777764433 4444555666677778889999999999985
No 14
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=8.6e-34 Score=267.56 Aligned_cols=358 Identities=15% Similarity=0.105 Sum_probs=248.1
Q ss_pred CCCCHHHHhhhcCCCccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 015136 6 HRYTVDEALTSAGFGKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSD 85 (412)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d 85 (412)
+..+.+++..+....+..+.++.++++.++..+.++..+++..|.+.+++|+|.++.|++.+.+.+++.+++++.|+++|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~D 89 (467)
T PRK09556 10 PTLDLPLEVQRKMWFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYAD 89 (467)
T ss_pred CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhh
Confidence 34445444444445566778888999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhHHHHHHHHHHHHHHHhhc-----chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHH
Q 015136 86 NYGRKKGFLGIAMITSGIGLLSAF-----SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTL 159 (412)
Q Consensus 86 r~Grr~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 159 (412)
|+|||+++.++.++++++.+..+. +++++.+++.|++.|++.+.. +...++++|++|+++||+++|+...+.++
T Consensus 90 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~l 169 (467)
T PRK09556 90 GKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNL 169 (467)
T ss_pred ccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccch
Confidence 999999998888887777665544 689999999999999999987 88889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcC---ChHHHHHHHHHHHHHHHH-HHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccc
Q 015136 160 GSIFEAALAWIVMITL---NWRWLLALSSIPSFAVLL-LYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLV 235 (412)
Q Consensus 160 g~~~~~~~~~~l~~~~---~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (412)
|.++++.+..++.+.. +||..|.+.+++.++..+ .+++.+++|+... ..++ ++.. ++
T Consensus 170 G~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~---~~~~-~~~~------~~--------- 230 (467)
T PRK09556 170 GGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELG---WGKA-EEIF------GE--------- 230 (467)
T ss_pred hhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcC---CCCh-hhcc------cC---------
Confidence 9999999987776643 699999888877766544 4455566654210 0000 0000 00
Q ss_pred cccCCCCCcccCCCCCCCcccchhhhhhhhcccccch-hhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Q 015136 236 SDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSF-LLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSK 314 (412)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (412)
....+.+..++++ .... ..+ +..++++ .++..++..++....+++...|.|.|.++.
T Consensus 231 -----~~~~~~~~~~~~~-~~~~-----------~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~-- 288 (467)
T PRK09556 231 -----PISEEDKETESTD-MTKW-----------QIFVEYVLKNP---VIWLLCFANIFLYIVRIGIDNWSPVYAFQE-- 288 (467)
T ss_pred -----ccchhhhcccccc-CcHH-----------HHHHHHHHcCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--
Confidence 0000000000000 0000 001 1122222 334445555555666677778888777443
Q ss_pred cccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHH--hhhhhHHHHHHHHHHH
Q 015136 315 CGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLA--MLQSNILITGLLVGAR 392 (412)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~ 392 (412)
.|++..+++.......++.+++++++|+++||++||+.+.....+..++...+. ..++.....+..++.|
T Consensus 289 --------~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 360 (467)
T PRK09556 289 --------LGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALG 360 (467)
T ss_pred --------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 578888888888889999999999999999999998877665444443332222 2233333434455555
Q ss_pred HHHhhHhHHHHhhccCCCCC
Q 015136 393 MFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 393 ~~~~~~~~~~~~~~~e~~P~ 412 (412)
++..+........+.|.+|+
T Consensus 361 ~~~~~~~~~~~~~~~~~~p~ 380 (467)
T PRK09556 361 FLVFGPQLLIGVAAVGFVPK 380 (467)
T ss_pred HHHhhHHHHHHHHHHhhcch
Confidence 44333333334566687774
No 15
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.7e-32 Score=260.50 Aligned_cols=355 Identities=19% Similarity=0.204 Sum_probs=246.7
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhc--------CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEW--------GVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKK 91 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~ 91 (412)
.+...+..++..++.+..+++...+++..|.+.+++ +.++.+.+++.+.+.++..++++++|+++||+|||+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~ 86 (479)
T PRK10077 7 SSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRD 86 (479)
T ss_pred chHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 445667777788889999999999999999898887 888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcc------------hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHH
Q 015136 92 GFLGIAMITSGIGLLSAFS------------PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWT 158 (412)
Q Consensus 92 ~~~~~~~~~~i~~~~~~~~------------~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 158 (412)
+++++.++.+++.+.+++. +.++.++++|+++|++.|.. +...++++|++|+++|++++++.+.+..
T Consensus 87 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~ 166 (479)
T PRK10077 87 SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAII 166 (479)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHH
Confidence 9999999999888877652 23567889999999999998 8899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH--------hcCChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCC
Q 015136 159 LGSIFEAALAWIVM--------ITLNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLP 230 (412)
Q Consensus 159 ~g~~~~~~~~~~l~--------~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (412)
+|..+++.++..+. +..|||+.|++.+++.++..+..+++||+|+++..+++.+++++..++....++..
T Consensus 167 ~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~-- 244 (479)
T PRK10077 167 FGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLAT-- 244 (479)
T ss_pred HHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHH--
Confidence 99999988776653 35689999999888777776667789999988766666665554443322110000
Q ss_pred CCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 015136 231 NGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSS 310 (412)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (412)
. ..+..+....+.+. ..+..+...............+.....++....+.|.+.+
T Consensus 245 --~--------------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~ 299 (479)
T PRK10077 245 --Q--------------------ALQEIKHSLDHGRK---TGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFK 299 (479)
T ss_pred --H--------------------HHHHHHHHHHHhhh---hhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHH
Confidence 0 00000000000000 0000111000000001111112222223334445555442
Q ss_pred cccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhh--hh--HHHHH
Q 015136 311 TQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQ--SN--ILITG 386 (412)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~--~~--~~~~~ 386 (412)
+.|.+...........++..+++.+++++++||+|||+.++.+.++.+++.+++.... +. .....
T Consensus 300 -----------~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 368 (479)
T PRK10077 300 -----------TLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALL 368 (479)
T ss_pred -----------HcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 2356666667777778888999999999999999999999999998888877765421 11 12222
Q ss_pred HHHHHHHHHh-hHhHHHHhhccCCCCC
Q 015136 387 LLVGARMFAF-GAFTIACIFTPEQLGW 412 (412)
Q Consensus 387 ~~~~~~~~~~-~~~~~~~~~~~e~~P~ 412 (412)
..++.+++.. ...|..+++++|.+|+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~ 395 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPN 395 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCCh
Confidence 2333333333 2347788999999984
No 16
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.2e-32 Score=250.11 Aligned_cols=304 Identities=16% Similarity=0.076 Sum_probs=217.0
Q ss_pred HhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHH
Q 015136 37 EAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISL 116 (412)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 116 (412)
+......+++..|.+.+|+|+|+++.|++.+.+.+++.+++++.|+++||+|||+++..+......+.......++++.+
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 44566788899999999999999999999999999999999999999999999987765555554443333334799999
Q ss_pred HHHHHHHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH-HHHH
Q 015136 117 VTLRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAV-LLLY 195 (412)
Q Consensus 117 ~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~-~~~~ 195 (412)
++.|+++|++.+........++|++|+++|++++++.+.+..+|..++++++..+.++.|||+.|++.+++.++. ++.+
T Consensus 83 ~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~ 162 (368)
T TIGR00903 83 LACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVL 162 (368)
T ss_pred HHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999998655455556899999999999999999999999999999999999999999999988777665 4456
Q ss_pred HhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhc
Q 015136 196 SLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLL 275 (412)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 275 (412)
+++||+|++..+ +. +.++. .++++++
T Consensus 163 ~~lp~~p~~~~~--~~-~~~~~---------------------------------------------------~~~~~~l 188 (368)
T TIGR00903 163 AALPALPFQAAE--GF-GFKDA---------------------------------------------------VKEFGAL 188 (368)
T ss_pred HHcCCCCCCCCC--Cc-chHHH---------------------------------------------------HHHHHHH
Confidence 678887753110 00 00000 0023445
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhh
Q 015136 276 FSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRA 355 (412)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~ 355 (412)
++++ ..+.....+++....+|++..|.|.|+++. |++.. .+.......+.+. +..++++||.
T Consensus 189 l~~~---~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~-----------g~s~~-~~~~~~l~~~~g~---~g~~~~~d~~ 250 (368)
T TIGR00903 189 AGRK---DLWIIGAILGFGVALFDNLAIWLEAALRPA-----------GLEDI-AGDAVALAILAGL---IGVAVIPDRV 250 (368)
T ss_pred HcCh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------CCChH-HHHHHHHHHHHHH---HHHHHhhHHh
Confidence 5543 335555666777788888889999988443 45543 4444444444444 4457888887
Q ss_pred ch---hhHHH-HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 356 GR---KLSLT-IMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 356 gr---r~~l~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
.| |+... ....+.++....+....+......+..+.+++....++..+++.+|++|+
T Consensus 251 ~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~ 311 (368)
T TIGR00903 251 ARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDK 311 (368)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcch
Confidence 54 33323 23444444444444443444444555566677777778888999999996
No 17
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.2e-32 Score=255.86 Aligned_cols=337 Identities=21% Similarity=0.266 Sum_probs=242.2
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
++.++..+..+.+.++..+++.....+..|.+.+++|+|+.+.+++.+++.+++.+++++.|+++||+|||+++.++.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 13 TRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 34566677888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 015136 100 TSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWR 178 (412)
Q Consensus 100 ~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 178 (412)
.+++.++.+++++++.++++|++.|++.+.. +....++.|++|+++|+++.++...+.++|.++++.+.+.+.+..+||
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~ 172 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWR 172 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHH
Confidence 9999999999999999999999999999987 788889999999999999999999999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccch
Q 015136 179 WLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSS 258 (412)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (412)
+.|++..+..++........||++++..++. ++.. + + .+....
T Consensus 173 ~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~---------------~~~~------------~-~--~~~~~~------- 215 (426)
T PRK12307 173 AAFFVGLLPVLLVIYIRARAPESKEWEEAKL---------------SGKG------------K-H--SQSAWS------- 215 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCChHHHHhhh---------------hccc------------c-c--cccchh-------
Confidence 9998865443333222222344332110000 0000 0 0 000000
Q ss_pred hhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHH
Q 015136 259 RIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLAS 338 (412)
Q Consensus 259 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (412)
....+++++++++..+.........+......+....+.|.+.++ .|.++...+.......
T Consensus 216 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~ 276 (426)
T PRK12307 216 --------VFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-----------EGFDTGVVSNLMTAAA 276 (426)
T ss_pred --------hhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------cCCCHHHHHHHHHHHH
Confidence 000134445554444433333333333333334455566666533 3577778888888889
Q ss_pred cchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhh-hHH-HHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 339 LGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQS-NIL-ITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 339 ~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
++.++++++.|++.||++||+.+..+.++..+..+.+..... ... .....+..++...+..+..+.++.|.+|+
T Consensus 277 ~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 352 (426)
T PRK12307 277 FGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPL 352 (426)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcH
Confidence 999999999999999999999988888777666555543222 222 11222222222234455667777888874
No 18
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.4e-31 Score=250.16 Aligned_cols=327 Identities=16% Similarity=0.171 Sum_probs=227.5
Q ss_pred cHHHHHHHHHHHHHHHhhHHHhhhhhhhh-hhhhc--CCCcchhHHHH-----HHHHHHHHHHHHHHHHHHhhhcchhHH
Q 015136 22 FQYLVFAYAGLAVFAEAMEIMILSFIGPA-VKSEW--GVSPSAESLLS-----TVVFAGNLVGVYLWGLLSDNYGRKKGF 93 (412)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~s~~~~~~~~-----s~~~~~~~i~~~~~g~l~dr~Grr~~~ 93 (412)
++++.+....++.+.++++...++.+.|. +.+++ +.++. .+++. ++.+++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 44567777888999999999999988775 45555 67766 45554 345567789999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhHH--------HHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHH
Q 015136 94 LGIAMITSGIGLLSAFSPNYI--------SLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFE 164 (412)
Q Consensus 94 ~~~~~~~~i~~~~~~~~~~~~--------~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~ 164 (412)
+.+.++++++.++++++++++ .+++.|+++|++.|.. +....++.|++|+++|++..+....+..+|..++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 5888999999999998 8888999999999999999999999999999998
Q ss_pred HHHHHHHHh--------cCChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCcccc
Q 015136 165 AALAWIVMI--------TLNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVS 236 (412)
Q Consensus 165 ~~~~~~l~~--------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (412)
..+...+.. .+|||+.|++.+++.++........||+|++..++++.++.+
T Consensus 178 ~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~~--------------------- 236 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAAK--------------------- 236 (438)
T ss_pred HHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhccccc---------------------
Confidence 877776652 579999999888766554444445677665321110000000
Q ss_pred ccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc
Q 015136 237 DATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCG 316 (412)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (412)
++ . ...+.+++.+. .........++....+|....+.|.|.++.
T Consensus 237 -------------~~---~--------------~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~---- 280 (438)
T PRK09952 237 -------------KR---I--------------PVIEALLRHPG--AFLKIIALRLCELLTMYIVTAFALNYSTQN---- 280 (438)
T ss_pred -------------cc---C--------------CHHHHHHHchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 00 0 00111222221 112222233344556666667777665332
Q ss_pred cccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh---hhh-hHHHHHHHHHHH
Q 015136 317 TTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAM---LQS-NILITGLLVGAR 392 (412)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~---~~~-~~~~~~~~~~~~ 392 (412)
.|.+...........++..+++.++.|+++||+|||+.+..+.++..++.+.+.. ..+ ........++.+
T Consensus 281 ------~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 354 (438)
T PRK09952 281 ------LGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLAN 354 (438)
T ss_pred ------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 3566555444555566777888999999999999999988877666554433322 122 222233344456
Q ss_pred HHHhhHhHHHHhhccCCCCC
Q 015136 393 MFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 393 ~~~~~~~~~~~~~~~e~~P~ 412 (412)
++.+...+..+++.+|.+|+
T Consensus 355 ~~~~~~~~~~~~~~~e~~p~ 374 (438)
T PRK09952 355 IAHDMVVCVQQPMFTEMFGA 374 (438)
T ss_pred HHHHHHHHHHHHHHHHHCCc
Confidence 66666778888999999985
No 19
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=7.8e-32 Score=248.88 Aligned_cols=317 Identities=17% Similarity=0.146 Sum_probs=229.3
Q ss_pred ccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHH
Q 015136 21 KFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMIT 100 (412)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 100 (412)
+++|..+..+.+..+..........+..|.+.+++|.|+++.++..+.+.+++.+++++.|+++||+|||+++..+.++.
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 34555555555555554444455566789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHH
Q 015136 101 SGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRW 179 (412)
Q Consensus 101 ~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~ 179 (412)
+++.+.+.+++|++.+++.|+++|++.+.. +...+++.|++|+++|++++|+...+.++|..++|++++.+.++.|||+
T Consensus 85 ~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~ 164 (390)
T PRK03545 85 IASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRT 164 (390)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHH
Confidence 999999999999999999999999999887 7888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccch
Q 015136 180 LLALSSIPSFAVLLL-YSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSS 258 (412)
Q Consensus 180 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (412)
.|++.+++.++..+. ....||.|+ +++ ++.
T Consensus 165 ~f~~~~~~~~l~~~~~~~~~~~~~~----~~~-~~~-------------------------------------------- 195 (390)
T PRK03545 165 TFLAIGGGALITLLLLIKLLPLLPS----EHS-GSL-------------------------------------------- 195 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCC----CCc-chH--------------------------------------------
Confidence 999998877665433 344555432 000 000
Q ss_pred hhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHH
Q 015136 259 RIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLAS 338 (412)
Q Consensus 259 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (412)
++.++.++++..+..... .+......+....+.+.+.++ ..|.++.+.+.......
T Consensus 196 -----------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~----------~~g~s~~~~~~~~~~~~ 251 (390)
T PRK03545 196 -----------KSLPLLFRRPALVSLYLL---TVVVVTAHFTAYSYIEPFVQQ----------VAGLSENFATLLLLLFG 251 (390)
T ss_pred -----------HHHHHHHhCcHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH----------hcCCCccHHHHHHHHHH
Confidence 012223333332222222 122222333333344444322 24688888899999999
Q ss_pred cchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHH-HhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 339 LGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPL-AMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 339 ~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
+++++++++.|++.||++||.... +..+..++...+ ...++.+...+..++.+++.....+.......|..|
T Consensus 252 ~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 324 (390)
T PRK03545 252 GAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP 324 (390)
T ss_pred HHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC
Confidence 999999999999999999886544 444444444333 334444555556666666665555555566655554
No 20
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.7e-31 Score=253.39 Aligned_cols=366 Identities=17% Similarity=0.110 Sum_probs=256.4
Q ss_pred cHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHH
Q 015136 22 FQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITS 101 (412)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 101 (412)
++|.++..++++.+....+..+.+...|.+.+++|.+.++.+|+.+.+.+++.++.++.|+++||+|||++++.+.++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecc-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHH
Q 015136 102 GIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFV-PAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRW 179 (412)
Q Consensus 102 i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~ 179 (412)
++.+++++++|++.++++|+++|+|.+.. +.....+.+.+ |+++|++++|+......+|..+||.+++.+.++.+||+
T Consensus 83 ~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~ 162 (495)
T PRK14995 83 LASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGS 162 (495)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHH
Confidence 99999999999999999999999999887 76666676665 67999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHhccCCchhhhhcCChHHHHHHH------HHHHHhhCCCCCCCccccccCCCCCcccCCC-CC
Q 015136 180 LLALSSIPSFAVL-LLYSLAPESPRYLNVKGRTTEARNIL------DKIALLNKAKLPNGMLVSDATSRPDEELAPP-DN 251 (412)
Q Consensus 180 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 251 (412)
.|++...+.++.. +..+++||+++.. +++.+...... ......+......... ....... ..
T Consensus 163 ~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~--------~~~~~~~~~~ 232 (495)
T PRK14995 163 VFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTALKGFLSL--------WVTSLTLLTG 232 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhccccCCch--------HHHHHHHHHH
Confidence 9999876666553 4456677765321 11111111000 0000000000000000 0000000 00
Q ss_pred CCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchH
Q 015136 252 TPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLY 331 (412)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (412)
.........+|.+.+.+..+++ +++++.. .......+.....+++...+.|.++++. .|.++.+++
T Consensus 233 ~~~l~~f~~~e~~~~~p~~~~~-lf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~lq~v----------~g~s~~~ag 298 (495)
T PRK14995 233 ALLLGLFIRTQLAASRPMIDMR-LFTHRII---LSGVVMAMTAMITLVGFELLMAQELQFV----------HGLSPLEAG 298 (495)
T ss_pred HHHHHHHHHHHhcCCCCCcCHH-HhCCccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHH----------cCCCHHHHH
Confidence 0000000001111222222333 3333322 2223333334445556666667665433 478999999
Q ss_pred HHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHHHhhHhHHHHhhccC
Q 015136 332 LSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAML---QSNILITGLLVGARMFAFGAFTIACIFTPE 408 (412)
Q Consensus 332 ~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 408 (412)
....+..++..++.++.|++.||+|+|+.+..+.++.+++.+++... .+.+......++.|++.+...+.......+
T Consensus 299 ~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~ 378 (495)
T PRK14995 299 MFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMA 378 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999888888877777665432 233444556777788777777766666666
Q ss_pred CCC
Q 015136 409 QLG 411 (412)
Q Consensus 409 ~~P 411 (412)
..|
T Consensus 379 ~~~ 381 (495)
T PRK14995 379 AAP 381 (495)
T ss_pred cCC
Confidence 555
No 21
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=2.7e-31 Score=245.42 Aligned_cols=319 Identities=13% Similarity=0.114 Sum_probs=245.4
Q ss_pred cHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHH
Q 015136 22 FQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITS 101 (412)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 101 (412)
++++....+++..+..+......+...|.+.+++|+|.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45566667778888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-cCChHH
Q 015136 102 GIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI-TLNWRW 179 (412)
Q Consensus 102 i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~w~~ 179 (412)
++.+++.++++++.+++.|++.|++.+.. +...+++.|++|+++|+++++..+....+|..++|.+.+.+.+ ..+||+
T Consensus 84 i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~ 163 (394)
T PRK03699 84 LAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYW 163 (394)
T ss_pred HHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 99999999999999999999999999887 7788899999999999999999999999999999999888764 579999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchh
Q 015136 180 LLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSR 259 (412)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (412)
.|.+.+++.++..+..++ .+.|+.. +++. +++ ++
T Consensus 164 ~f~~~~~~~~~~~~~~~~-~~~p~~~--~~~~---------------------------~~~-----~~----------- 197 (394)
T PRK03699 164 VYACIGLVYVAIFILTLF-SEFPALG--KHAP---------------------------KAD-----KP----------- 197 (394)
T ss_pred HHHHHHHHHHHHHHHHHh-cCCcccc--ccCc---------------------------ccc-----Cc-----------
Confidence 999888776655443333 2222100 0000 000 00
Q ss_pred hhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHc
Q 015136 260 IRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASL 339 (412)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (412)
..+..++ +..+......++....++....|.|.|.++. .|+++.+.+.......+
T Consensus 198 -----------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----------~g~s~~~~~~~~~~~~~ 252 (394)
T PRK03699 198 -----------VAKEKWG----IGVLFLAIAALLYILAQLTFISWVPEYAQKK----------FGMSLEDAGNLVSNFWM 252 (394)
T ss_pred -----------cccccCC----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------cCCChHHhhHHHHHHHH
Confidence 0000001 2233344444445556677778888777433 47888889999999999
Q ss_pred chhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 340 GELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 340 ~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
+..+++++.|+++||++||+.+.....+.++...++...++.....+..++.+++.++.++...++..|..|
T Consensus 253 ~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 324 (394)
T PRK03699 253 AYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK 324 (394)
T ss_pred HHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999888777777766666555555555556667777777777777766666544
No 22
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=2.5e-32 Score=259.59 Aligned_cols=362 Identities=22% Similarity=0.294 Sum_probs=243.4
Q ss_pred HHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCC--------cchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHH
Q 015136 24 YLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVS--------PSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLG 95 (412)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--------~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~ 95 (412)
+....++.++.+...++...++...+.+.++++.+ ..+.+++.+++.++..+++++.|+++||+|||+++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~ 106 (481)
T TIGR00879 27 ALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLI 106 (481)
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHH
Confidence 33444455566667778888888899998888877 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcc---hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHH---
Q 015136 96 IAMITSGIGLLSAFS---PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALA--- 168 (412)
Q Consensus 96 ~~~~~~i~~~~~~~~---~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--- 168 (412)
+.++.+++.+++... .+++.+++.|++.|++.+.. +...+++.|++|+++|++++++.+.+..+|..+++.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 186 (481)
T TIGR00879 107 IALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGK 186 (481)
T ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 999999999888543 34568999999999999988 88889999999999999999999999999999999998
Q ss_pred HHHHhcCChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCC
Q 015136 169 WIVMITLNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAP 248 (412)
Q Consensus 169 ~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (412)
....+..+||+.|++.++..++..+..+++||+|++...+++.++..+..++....+. +....... .+.
T Consensus 187 ~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~---- 255 (481)
T TIGR00879 187 VSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSG---EDKELLDE----LEL---- 255 (481)
T ss_pred hcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCC---CcHHHHHH----HHH----
Confidence 6665678999999997776666666677889998876555554443333222211100 00000000 000
Q ss_pred CCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCc
Q 015136 249 PDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDS 328 (412)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (412)
.........+..+....+..+..++...+..+...+..+...........+.+.+.. +.|++..
T Consensus 256 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~g~~~~ 319 (481)
T TIGR00879 256 -----IDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFE-----------NAGVSTD 319 (481)
T ss_pred -----HHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHH-----------HcCCCch
Confidence 000000000000011112222222212223333333333333333344445554442 3467777
Q ss_pred chHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh-----hhh-----hHH-HHHHHHHHHHHHhh
Q 015136 329 SLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAM-----LQS-----NIL-ITGLLVGARMFAFG 397 (412)
Q Consensus 329 ~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~-----~~~-----~~~-~~~~~~~~~~~~~~ 397 (412)
..+.......++.+++++++|+++||+|||+.+.++.++.+++.+.+.+ ..+ ... .....++.++...+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (481)
T TIGR00879 320 HAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMG 399 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHcc
Confidence 7888888889999999999999999999999999888888777776652 110 222 22222223333333
Q ss_pred HhHHHHhhccCCCCC
Q 015136 398 AFTIACIFTPEQLGW 412 (412)
Q Consensus 398 ~~~~~~~~~~e~~P~ 412 (412)
..+....++.|.+|+
T Consensus 400 ~~~~~~~~~~~~~p~ 414 (481)
T TIGR00879 400 WGPVPWVIVSEIFPL 414 (481)
T ss_pred ccCeehhhhhccCCh
Confidence 446677788888874
No 23
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=2.5e-31 Score=248.51 Aligned_cols=285 Identities=17% Similarity=0.171 Sum_probs=214.4
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
++.++.+....++.++...++...++...|.+.+++|+|+++.|++.+.+.+++.+++++.|+++||+|||+++.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~ 97 (434)
T PRK11663 18 RYWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHH
Confidence 34555666777788888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 015136 100 TSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWR 178 (412)
Q Consensus 100 ~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 178 (412)
.+++.++++++++++.+++.|++.|++.|.. +...+++.|++|+++|++++++.+.+.++|..+++.+.+.+.+.+|||
T Consensus 98 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~ 177 (434)
T PRK11663 98 TGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWR 177 (434)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHH
Confidence 9999999999999999999999999999887 778889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccc
Q 015136 179 WLLALSSIPSFAV-LLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTS 257 (412)
Q Consensus 179 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (412)
+.|++.+++.++. ++..++++|+|++.......++.+ + .++.+++ ..+ +..
T Consensus 178 ~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----------------~------~~~~~~~--~~~--~~~-- 229 (434)
T PRK11663 178 YGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH----------------D------ALELAQQ--QEG--AGL-- 229 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc----------------c------ccccchh--ccc--cCC--
Confidence 9999988776654 344556777664221000000000 0 0000000 000 000
Q ss_pred hhhhhhhhcccccc-hh-hccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHH
Q 015136 258 SRIRITKLKSGFSS-FL-LLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVF 335 (412)
Q Consensus 258 ~~~~~~~~~~~~~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (412)
+.++ ++ ..++++ ..+......+.....+++...|.|.|.++. .|++..+++....
T Consensus 230 ----------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----------~g~s~~~a~~~~~ 286 (434)
T PRK11663 230 ----------SRKEILTKYVLLNP---YIWLLSFSYVLVYVVRAAINDWGNLYMSET----------LGVDLVTANSAVS 286 (434)
T ss_pred ----------ChhhhHHHHHhcCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------cCCCHHHHHHHHH
Confidence 0000 00 112222 233333334444455566667777776332 4788888899999
Q ss_pred HHHcchhhHHHHHHHHHHhh
Q 015136 336 LASLGELPGLVLAGIIVDRA 355 (412)
Q Consensus 336 ~~~~~~~~g~~~~g~l~dr~ 355 (412)
...+++++++++.|+++||+
T Consensus 287 ~~~~~~~~g~~~~g~l~dr~ 306 (434)
T PRK11663 287 MFELGGFIGALVAGWGSDKL 306 (434)
T ss_pred HHHHHHHHHHHHHhhhHHHh
Confidence 99999999999999999998
No 24
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=8.6e-31 Score=244.99 Aligned_cols=323 Identities=18% Similarity=0.240 Sum_probs=221.7
Q ss_pred HHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHH-HHHH-----HHHHHHHHHHHHHHHhhhcchhHHHHH
Q 015136 23 QYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLL-STVV-----FAGNLVGVYLWGLLSDNYGRKKGFLGI 96 (412)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~s~~-----~~~~~i~~~~~g~l~dr~Grr~~~~~~ 96 (412)
|++....++++.+.+++|+..+++..|.+.++++.++.+.+.. .+.. .++..+++++.|+++||+|||+.++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 4556888889999999999999999999999999988876544 3322 222347899999999999999999999
Q ss_pred HHHHHHHHHHhhcchhHHH--------HHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHH
Q 015136 97 AMITSGIGLLSAFSPNYIS--------LVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAAL 167 (412)
Q Consensus 97 ~~~~~i~~~~~~~~~~~~~--------~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 167 (412)
.++.+++.++++++++++. ++++|+++|++.+.. +....+++|++|+++|++++++.....++|..+++.+
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998773 688999999999987 7778899999999999999999999988888888888
Q ss_pred HHHHH--------hcCChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccC
Q 015136 168 AWIVM--------ITLNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDAT 239 (412)
Q Consensus 168 ~~~l~--------~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (412)
++.+. +.+|||+.|++..+...+........||++++.. + +.+.
T Consensus 173 g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~---------~--------~~~~----------- 224 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLA---------R--------KHRP----------- 224 (434)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHH---------h--------hhcc-----------
Confidence 77763 5689999998754432222211111222211000 0 0000
Q ss_pred CCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccc
Q 015136 240 SRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTL 319 (412)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (412)
+.. ..++...+. ++.........+.....++....+.|.|.++.
T Consensus 225 ----------~~~-----------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~------- 268 (434)
T PRK15075 225 ----------SMR-----------------EIFRSLAAN--WRIVLAGMLMVAMTTVSFYLITVYTPTFGKTV------- 268 (434)
T ss_pred ----------ccc-----------------cHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------
Confidence 000 011111111 12222223333344556677778888777432
Q ss_pred ccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHH-HHHh---hhhhHHHHHHHHHHHHHH
Q 015136 320 TVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICIL-PLAM---LQSNILITGLLVGARMFA 395 (412)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~-~l~~---~~~~~~~~~~~~~~~~~~ 395 (412)
.|.+..+.++......+++++++++.|+++||+|||+.+..+..+..+... .+.. .++.........+.+++.
T Consensus 269 ---~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (434)
T PRK15075 269 ---LHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLY 345 (434)
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 467777888888888899999999999999999999988776554433222 1111 112222222234445555
Q ss_pred hhHhHHHHhhccCCCCC
Q 015136 396 FGAFTIACIFTPEQLGW 412 (412)
Q Consensus 396 ~~~~~~~~~~~~e~~P~ 412 (412)
+...+....+..|.+|+
T Consensus 346 g~~~~~~~~~~~e~~p~ 362 (434)
T PRK15075 346 GSYNGAMVVALTEVMPA 362 (434)
T ss_pred HHHHhhHHHHHHHHCCC
Confidence 55566667788888874
No 25
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=2.2e-30 Score=238.66 Aligned_cols=317 Identities=12% Similarity=0.109 Sum_probs=227.8
Q ss_pred ccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHH
Q 015136 21 KFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMIT 100 (412)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 100 (412)
|..|+.+..+.+..+.............|.+.+++|.++++.++..+.+.++..+++++.|+++||+|||++++.+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~ 95 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLL 95 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 33566555555555555555556666789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHH
Q 015136 101 SGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRW 179 (412)
Q Consensus 101 ~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~ 179 (412)
+++.+++.++++++.+++.|+++|++.+.. +...+++.|++|+++|++++++...+.++|..++|++++.+.+.+|||+
T Consensus 96 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~ 175 (394)
T PRK10213 96 TLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRN 175 (394)
T ss_pred HHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHH
Confidence 999999999999999999999999999988 8888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccch
Q 015136 180 LLALSSIPSFAVLLL-YSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSS 258 (412)
Q Consensus 180 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (412)
.|++.+++.++..+. ....||+|+. ++. + .
T Consensus 176 ~f~~~~~l~~~~~l~~~~~~p~~~~~----~~~-~-~------------------------------------------- 206 (394)
T PRK10213 176 VFNAAAVMGVLCIFWIIKSLPSLPGE----PSH-Q-K------------------------------------------- 206 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCcc----ccc-c-h-------------------------------------------
Confidence 999987766554333 3335554310 000 0 0
Q ss_pred hhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhh-hcccccccccccccccccCCCCcchHHHHHHH
Q 015136 259 RIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMT-SKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLA 337 (412)
Q Consensus 259 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (412)
.+.++.++++..+..... .+......++...+. |.+. ++.|+++...+......
T Consensus 207 -----------~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~-----------~~~g~s~~~~g~~~~~~ 261 (394)
T PRK10213 207 -----------QNTFRLLQRPGVMAGMIA---IFMSFAGQFAFFTYIRPVYM-----------NLAGFGVDGLTLVLLSF 261 (394)
T ss_pred -----------hHHHHHhcCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH-----------HhcCCChhHHHHHHHHH
Confidence 011122333322222222 222222233333333 4443 23468888889999999
Q ss_pred HcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 338 SLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 338 ~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
+++.++++++.+++.||.+++..............++....++.+......++.|++.+...+...+++.+..|
T Consensus 262 ~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~ 335 (394)
T PRK10213 262 GIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA 335 (394)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc
Confidence 99999999999999999654433443333333333333344455555556667777777667766666655544
No 26
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=1.2e-30 Score=245.97 Aligned_cols=332 Identities=13% Similarity=0.088 Sum_probs=227.9
Q ss_pred CCccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHH
Q 015136 19 FGKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAM 98 (412)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~ 98 (412)
.++++++.+...++..+.........++..|.+.+++|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+.+
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~ 109 (476)
T PLN00028 30 FARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLM 109 (476)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 44555666777777777777878888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHH----hc
Q 015136 99 ITSGIGLLSAFSPNYISLVTLRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVM----IT 174 (412)
Q Consensus 99 ~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~----~~ 174 (412)
+++++.++++++++++.+++.|++.|++.+.......+++|++|+++||+++++.....++|..+++.+.+.+. +.
T Consensus 110 ~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~ 189 (476)
T PLN00028 110 LTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDA 189 (476)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999998765334567889999999999999998877778777766665443 22
Q ss_pred -----CChHHHHHHHHHHHHHHHHHHHhccCC-chhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCC
Q 015136 175 -----LNWRWLLALSSIPSFAVLLLYSLAPES-PRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAP 248 (412)
Q Consensus 175 -----~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (412)
.|||+.|++.+++.++..+..++++++ |+ ++.++.++ +. +
T Consensus 190 ~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~-----~~~~~~~~---------~~---------------~----- 235 (476)
T PLN00028 190 GAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPD-----GNYRELKK---------SG---------------T----- 235 (476)
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCC-----CchhhHHh---------cC---------------c-----
Confidence 489999999988877665554444432 21 10000000 00 0
Q ss_pred CCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCc
Q 015136 249 PDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDS 328 (412)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (412)
.+++ . ....+++.++.+. ++..+..++......+....+.|.|..+ +.|+++.
T Consensus 236 -~~~~--~-----------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~l~~----------~~g~s~~ 288 (476)
T PLN00028 236 -MPKD--S-----------FSKVLRYGVTNYR---TWILALTYGYSFGVELTMDNIIAEYFYD----------RFGLSLE 288 (476)
T ss_pred -cccc--c-----------HHHHHHHHHcCch---hHHHHHHHHHHHHHHHHHHhHHHHHHHH----------hcCCCHH
Confidence 0000 0 0002222223222 2233333333334444455566655532 2478888
Q ss_pred chHHHHHHHHcchhhHHHHHHHHHHhhchh-------hHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHH
Q 015136 329 SLYLSVFLASLGELPGLVLAGIIVDRAGRK-------LSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTI 401 (412)
Q Consensus 329 ~~~~~~~~~~~~~~~g~~~~g~l~dr~grr-------~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (412)
+++....+..++++++++++|+++||++|| ....+..++.+++.+.+....+.+...+.+++.+++.....+.
T Consensus 289 ~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 368 (476)
T PLN00028 289 TAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGA 368 (476)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhh
Confidence 899999999999999999999999999865 2233333333333343333444444444455555555555666
Q ss_pred HHhhccCCCC
Q 015136 402 ACIFTPEQLG 411 (412)
Q Consensus 402 ~~~~~~e~~P 411 (412)
.+++.+|+.|
T Consensus 369 ~~~~~~~~~~ 378 (476)
T PLN00028 369 TFGIVPFVSR 378 (476)
T ss_pred hcccCcccCh
Confidence 6666666654
No 27
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.98 E-value=1.9e-30 Score=246.86 Aligned_cols=358 Identities=23% Similarity=0.305 Sum_probs=255.4
Q ss_pred HHHHHHHHHHHHHHhhH--HHhhhhhhhhhhhhcC-----CCc--chhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHH
Q 015136 24 YLVFAYAGLAVFAEAME--IMILSFIGPAVKSEWG-----VSP--SAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFL 94 (412)
Q Consensus 24 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~s~--~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~ 94 (412)
........+..+..+.+ ....+.....+.++.. .+. .+.+++.+...++..+++++.|+++|++|||+.++
T Consensus 44 ~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~ 123 (513)
T KOG0254|consen 44 ILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLL 123 (513)
T ss_pred HHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 33344444444444443 3445555556655332 122 34589999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015136 95 GIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI 173 (412)
Q Consensus 95 ~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 173 (412)
++.+++.++.+++++++|+++++++|++.|+|.|.. .+.+.+++|..|++.||...+..+....+|..++..++....+
T Consensus 124 ~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~ 203 (513)
T KOG0254|consen 124 LAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK 203 (513)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999999999999998 8889999999999999999999999999999999655555543
Q ss_pred c-CChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCC
Q 015136 174 T-LNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNT 252 (412)
Q Consensus 174 ~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (412)
. .+||..+.+..+++++..+..+++||+|+|+.++++.+++++.+.++.+.++.+.+.+. .+...+..
T Consensus 204 ~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~--~~~~~~~~--------- 272 (513)
T KOG0254|consen 204 VYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVEL--ELLKIKLL--------- 272 (513)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHH--HHHHHHHH---------
Confidence 3 48999999999998888777889999999999999999999999988764311111000 00000000
Q ss_pred CcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHH-HHHHHhhhcccccccccccccccccCCCCcchH
Q 015136 253 PLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTY-YGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLY 331 (412)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (412)
.+.........+++++++...++....+....+..++. ....++.+.+++.. |.+... .
T Consensus 273 --------~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~-----------g~~~~~-~ 332 (513)
T KOG0254|consen 273 --------VEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA-----------GLKSDT-F 332 (513)
T ss_pred --------HhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-----------CCCCch-H
Confidence 00000000013445555555565655555555444433 33445555555333 343332 6
Q ss_pred HHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhh-------------hHHHHHHHHHHHHHHhhH
Q 015136 332 LSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQS-------------NILITGLLVGARMFAFGA 398 (412)
Q Consensus 332 ~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~-------------~~~~~~~~~~~~~~~~~~ 398 (412)
....+.++..+++..++.++.||+|||++++.+...+.++.+++..... ...+...++....+..+.
T Consensus 333 ~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~ 412 (513)
T KOG0254|consen 333 LASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGW 412 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhccc
Confidence 6677778889999999999999999999999999999999988875211 112233344445556667
Q ss_pred hHHHHhhccCCCCC
Q 015136 399 FTIACIFTPEQLGW 412 (412)
Q Consensus 399 ~~~~~~~~~e~~P~ 412 (412)
.++.+.+.+|++|.
T Consensus 413 g~v~w~~~sEifp~ 426 (513)
T KOG0254|consen 413 GPVPWVIVSEIFPL 426 (513)
T ss_pred ccchhhhhhccCcH
Confidence 78999999999984
No 28
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.98 E-value=4.8e-30 Score=244.77 Aligned_cols=357 Identities=17% Similarity=0.253 Sum_probs=240.2
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
++++|+.+..++++.+...++....++..|.+.+++|.|+.+.+++.+.+.+++.+++++.|+++||+|||+.++.+.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 15 NRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 45677888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 015136 100 TSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWR 178 (412)
Q Consensus 100 ~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 178 (412)
.+++.++.+++++++.+++.|++.|++.+.. +....++.|.+|+++|++++++...+..+|..+++.+.+.+.++.+||
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 174 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWR 174 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 9999999999999999999999999998887 778889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccch
Q 015136 179 WLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSS 258 (412)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (412)
+.|.+..+..++.++.....||++++..++++.++.++..+.....+ .......
T Consensus 175 ~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~ 228 (496)
T PRK03893 175 ALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGE--------------------------HRIINIL 228 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcch--------------------------hHHHHHH
Confidence 99987555444434444455665443211111100000000000000 0000000
Q ss_pred hhh------hhhhc-ccccch----------------hhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Q 015136 259 RIR------ITKLK-SGFSSF----------------LLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKC 315 (412)
Q Consensus 259 ~~~------~~~~~-~~~~~~----------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (412)
... ..... .....+ ....+.+.++.........+......+....+.|.|.++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~---- 304 (496)
T PRK03893 229 LTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKT---- 304 (496)
T ss_pred HHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHh----
Confidence 000 00000 000000 000000000111111111111111222344566666532
Q ss_pred ccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHH
Q 015136 316 GTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQ--SNILITGLLVGARM 393 (412)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~ 393 (412)
+.|.+..+.+...+...++.++++++.|++.||+|||+.+..+..+..+..+.+.... ..+......++.++
T Consensus 305 ------~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (496)
T PRK03893 305 ------DLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQM 378 (496)
T ss_pred ------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence 3468888999999999999999999999999999999998887766665554443322 22222233333333
Q ss_pred HHhhHhHHHHhhccCCCCC
Q 015136 394 FAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 394 ~~~~~~~~~~~~~~e~~P~ 412 (412)
...+..+..++++.|.+|+
T Consensus 379 ~~~~~~~~~~~~~~~~~~~ 397 (496)
T PRK03893 379 LGQGISGLLPKLIGGYFDT 397 (496)
T ss_pred HhcccchhhHHHHHhhCCH
Confidence 3334456667777787763
No 29
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.98 E-value=1.5e-29 Score=233.70 Aligned_cols=311 Identities=21% Similarity=0.258 Sum_probs=234.4
Q ss_pred HHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhH
Q 015136 34 VFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNY 113 (412)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 113 (412)
.+....+.....+..|.+.+++|.|+++.+++.+.+.++..+++++.|+++||+|||+.+..+.++.+++.++...++++
T Consensus 14 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 93 (385)
T TIGR00710 14 SILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNI 93 (385)
T ss_pred HHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccH
Confidence 45556677788888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 015136 114 ISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVL 192 (412)
Q Consensus 114 ~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~ 192 (412)
+.+++.|++.|++.+.. +...+++.|++|+++|+++.++.+....+|..+++.+++.+.+..+||+.|++.++..++..
T Consensus 94 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 173 (385)
T TIGR00710 94 ETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLS 173 (385)
T ss_pred HHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 99999999999999988 88889999999999999999999999999999999999999999999999998887666554
Q ss_pred HH-HHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccc
Q 015136 193 LL-YSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSS 271 (412)
Q Consensus 193 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (412)
+. .++.||+++... + ++.++. .++
T Consensus 174 ~~~~~~~~~~~~~~~---~-~~~~~~---------------------------------------------------~~~ 198 (385)
T TIGR00710 174 ALIFFILPETLPYEA---R-IQISTY---------------------------------------------------FET 198 (385)
T ss_pred HHHHHhCCCCCCCcc---c-CCHHHH---------------------------------------------------HHH
Confidence 43 445565532110 0 000000 002
Q ss_pred hhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHH
Q 015136 272 FLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGII 351 (412)
Q Consensus 272 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l 351 (412)
+++.++++..+... +........++....+.|.+.. ++.|.++.+.+.......++.++++++.|++
T Consensus 199 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----------~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l 265 (385)
T TIGR00710 199 FLLLLKSKMFWGYA---LIYGASFGGFFAFFSGAPFVYI----------DIMGVSPSVFGLLFALNIIAMIFGGFLNGRF 265 (385)
T ss_pred HHHHHcCchhHHHH---HHHHHHHHHHHHHHHcChHHHH----------HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233333222222 1222222333444444454442 2346888888999999999999999999999
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 352 VDRAGRKLSLTIMLILVFICILPLAMLQ-----SNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 352 ~dr~grr~~l~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
.||+++|+.+..+..+..++.+.+.... ..........+.+++.+...+....+..|..|+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 331 (385)
T TIGR00710 266 IKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPH 331 (385)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc
Confidence 9999999998888777777666555421 222333445566677777788888888887763
No 30
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.98 E-value=7.8e-30 Score=235.27 Aligned_cols=311 Identities=14% Similarity=0.135 Sum_probs=228.2
Q ss_pred HHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHH
Q 015136 23 QYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSG 102 (412)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i 102 (412)
.|.....++++.+.... ....++..|.+.+|+|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+..++++
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~ 86 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPL-LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAV 86 (393)
T ss_pred HHHHHHHHHHHHHcchh-hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHH
Confidence 34444444444444333 36778999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHH
Q 015136 103 IGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITL-NWRWL 180 (412)
Q Consensus 103 ~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~w~~~ 180 (412)
+.+++++++|++.++++|+++|++.+.. +....++.+++| ++|+++++++..+..+|..+++.+++.+.++. +||+.
T Consensus 87 ~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~ 165 (393)
T PRK09705 87 GALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQT 165 (393)
T ss_pred HHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 9999999999999999999999999987 777778888886 88999999999999999999999999998875 89998
Q ss_pred HHHHHHHHHHHHHHHHhccC-CchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchh
Q 015136 181 LALSSIPSFAVLLLYSLAPE-SPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSR 259 (412)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (412)
+.+.++..++..+.++...+ .|+ +++ + + + .
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----------------------------~--~---~--~--------- 196 (393)
T PRK09705 166 LAWWALPAVVALFAWWWQSAREVA-----SSH----------------------------K--T---T--T--------- 196 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCc-----ccc----------------------------C--C---C--c---------
Confidence 87766654444333322211 110 000 0 0 0 0
Q ss_pred hhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHc
Q 015136 260 IRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASL 339 (412)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (412)
+.++.++++ ..+......+.....+++...+.|.+..+ .|.+..+.+.......+
T Consensus 197 -----------~~~~~l~~~---~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-----------~g~s~~~ag~~~~~~~i 251 (393)
T PRK09705 197 -----------TPVRVVFTP---RAWTLGVYFGLINGGYASLIAWLPAFYIE-----------IGASAQYSGSLLALMTL 251 (393)
T ss_pred -----------CCcccccCH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------cCCChhhhhHHHHHHHH
Confidence 001111122 22223333444456667777788877633 46888889999999999
Q ss_pred chhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCC
Q 015136 340 GELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQL 410 (412)
Q Consensus 340 ~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 410 (412)
+.++++++.+++.||++||+.+.++..+..++.+++...+..... ....+.+++.+..++.......+.+
T Consensus 252 ~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~l~g~g~g~~~~~~~~~~~~~~ 321 (393)
T PRK09705 252 GQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPV-LWAMVCGLGLGGAFPLCLLLALDHS 321 (393)
T ss_pred HHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHH-HHHHHHHHhccchHHHHHHHHHhhc
Confidence 999999999999999999999888887777776655432222111 2233456666666676665555554
No 31
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.98 E-value=1.1e-30 Score=240.34 Aligned_cols=308 Identities=18% Similarity=0.177 Sum_probs=222.6
Q ss_pred HhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHH
Q 015136 37 EAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISL 116 (412)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 116 (412)
.....+..++..|.+.+++|+|.++.+++.+++.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (377)
T TIGR00890 15 TSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAAL 94 (377)
T ss_pred HhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 33346678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH-
Q 015136 117 VTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLL- 194 (412)
Q Consensus 117 ~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~- 194 (412)
++.|++.|++.+.. +.....+.|++| ++|+++.++...+.++|..+++++.+.+.+..+||+.|++.+++.++..+.
T Consensus 95 ~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 173 (377)
T TIGR00890 95 YLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLG 173 (377)
T ss_pred HHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999876 666667778876 689999999999999999888777777778889999999998877766444
Q ss_pred HHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhh
Q 015136 195 YSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLL 274 (412)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (412)
+++++++|+... +++. +. + ++ ..+.++
T Consensus 174 ~~~~~~~~~~~~-~~~~-----------------------------~~----~--~~-----------------~~~~~~ 200 (377)
T TIGR00890 174 AFLIGYPPGQLI-KTNI-----------------------------EV----S--VK-----------------DYTVWE 200 (377)
T ss_pred HHheecCchhcc-ccCc-----------------------------cc----c--hh-----------------hhhHHH
Confidence 444544332100 0000 00 0 00 001222
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHh
Q 015136 275 LFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDR 354 (412)
Q Consensus 275 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr 354 (412)
.++++..+..... .+...........+.+.+.+ +.+.++.+.+.......++.++++++.|++.||
T Consensus 201 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr 266 (377)
T TIGR00890 201 MLRTPQFWVLYLS---FFLNAVSGLLLIGLYKPYGQ-----------SLGLSDGFLVLAVSISSIFNGGGRPFLGALSDK 266 (377)
T ss_pred HHcCccHHHHHHH---HHHHhHHHHHHHHHHHHHHH-----------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333322222222 22222222222223333332 235677778888888999999999999999999
Q ss_pred hchhhHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 355 AGRKLSLTIMLILVFICILPLAMLQSN--ILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 355 ~grr~~l~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
++||+.+.++..+.+++.+.+.+.++. .......++.+++.+...+..+.+.+|.+|+
T Consensus 267 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~ 326 (377)
T TIGR00890 267 IGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGP 326 (377)
T ss_pred HhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhh
Confidence 999999999888888887776654432 2233334555666666667777778887763
No 32
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.97 E-value=1e-29 Score=241.98 Aligned_cols=355 Identities=17% Similarity=0.169 Sum_probs=252.0
Q ss_pred HHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHH
Q 015136 25 LVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIG 104 (412)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 104 (412)
+++..++++.+...++....++..|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGS 81 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 34566778888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHH
Q 015136 105 LLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLAL 183 (412)
Q Consensus 105 ~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~ 183 (412)
++++.++|++.+++.|+++|++.+.. +...+++.|++|+++|+++.+++.....+|..++|.+++.+.++.+||+.|++
T Consensus 82 ~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~ 161 (485)
T TIGR00711 82 LLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLI 161 (485)
T ss_pred HHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhh
Confidence 99999999999999999999999988 88889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-HHHhccCCchhhhhcCChHHHHHHHH------HHHHhhCCCCCCCccccccCCCCCcccCCCCCCCccc
Q 015136 184 SSIPSFAVLL-LYSLAPESPRYLNVKGRTTEARNILD------KIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLT 256 (412)
Q Consensus 184 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (412)
.+.+.++..+ ..++.||+++. ++++.+....... .....+..+.. ...+......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~ 223 (485)
T TIGR00711 162 NVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPER----------------GWFDSNEILI 223 (485)
T ss_pred hhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCCC----------------CCCCchHHHH
Confidence 8877665543 34556664331 1111111111000 00000000000 0000000000
Q ss_pred ----------chhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCC
Q 015136 257 ----------SSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMH 326 (412)
Q Consensus 257 ----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (412)
....++.+.+++..+.+ +++.+..+ ......+...+.+++...+.|.|.++. .|.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~----------~g~s 289 (485)
T TIGR00711 224 LSITGLVAIIAFVVWELTDDNPLVDLR-LFKYRNFT---IGCVYMSLLGLGLYGSFYLLPLYLQQV----------LGYT 289 (485)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCccCHH-HHcCCChH---HHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCC
Confidence 00001111112222222 22322222 223333334455556666677666433 4788
Q ss_pred CcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh----hhhhHHHHHHHHHHHHHHhhHhHHH
Q 015136 327 DSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAM----LQSNILITGLLVGARMFAFGAFTIA 402 (412)
Q Consensus 327 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (412)
+.+.+....+..++.++++++.|++.||+|||+.+.++..+.+++.+.+.+ ..+.+......++.+++.+..++..
T Consensus 290 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~ 369 (485)
T TIGR00711 290 ALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPL 369 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999998888888777662 1223344455666777777666555
Q ss_pred HhhccCCCC
Q 015136 403 CIFTPEQLG 411 (412)
Q Consensus 403 ~~~~~e~~P 411 (412)
.....+..|
T Consensus 370 ~~~~~~~~~ 378 (485)
T TIGR00711 370 TTIALSGLP 378 (485)
T ss_pred HHHHHhcCC
Confidence 555555555
No 33
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=1.5e-30 Score=241.22 Aligned_cols=331 Identities=19% Similarity=0.206 Sum_probs=229.7
Q ss_pred HHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhH
Q 015136 34 VFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNY 113 (412)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 113 (412)
++....+...++...|.+.+++|.|+.+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 82 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY 82 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCH
Confidence 34566777888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 015136 114 ISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVL 192 (412)
Q Consensus 114 ~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~ 192 (412)
+.+++.|++.|++.+.. +....++.|++|+++|++++++.+...++|..+++.+++.+.+..+||+.|++.+++.++..
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 99999999999999988 88889999999999999999999999999999999999999999999999999887776654
Q ss_pred HH-HHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccc
Q 015136 193 LL-YSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSS 271 (412)
Q Consensus 193 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (412)
+. .++.+|+|+... ...++.++...+ .. ..+.+.+.+ + +....+
T Consensus 163 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~-------------~~~~~~~~~--~---------------~~~~~~ 207 (399)
T TIGR00893 163 VLWLKFIPDPPQKAK--WLTEEEKYIVVG---GL-------------LAEQQGKGP--S---------------TPKKYQ 207 (399)
T ss_pred HHhhheecCCCCccc--cCCHHHHhhcch---hh-------------ccccccccc--c---------------CCCccc
Confidence 44 444566543111 111111000000 00 000000000 0 000012
Q ss_pred hhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHH
Q 015136 272 FLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGII 351 (412)
Q Consensus 272 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l 351 (412)
.++.++++ ..+......+...........+.|.+.++. .|.++.+.+.......++.++++++.|++
T Consensus 208 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 274 (399)
T TIGR00893 208 IKELLKDR---RVWGLALGQFLVNIGLGFFLTWFPTYLVQE----------RGLSILEAGFMASLPGIVGFIGMILGGRL 274 (399)
T ss_pred hHHHhcCH---HHHHHHHHHHHHHhHHHHHHHHHHHHHHHH----------hcccHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 33333333 233334444444555556666667665332 36777888888889999999999999999
Q ss_pred HHhhchhh--HHHHHHHH--HH--HHHHHHHhh-hhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 352 VDRAGRKL--SLTIMLIL--VF--ICILPLAML-QSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 352 ~dr~grr~--~l~~~~~~--~~--~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
.||++||+ ........ .. .+...+... .+.....+.....+.+..+..+...++.+|.+|+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (399)
T TIGR00893 275 SDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPG 342 (399)
T ss_pred HHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcCh
Confidence 99999885 11111111 11 111111111 1122223333333434444788899999998874
No 34
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=2.4e-29 Score=234.33 Aligned_cols=325 Identities=14% Similarity=0.092 Sum_probs=233.7
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
++.....+..+.+.++..++.....++..|.+++++|+|+++.++..+.+.+++.+++++.|++.||+|||+++..+..+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~ 100 (438)
T PRK10133 21 SRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFL 100 (438)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 34456666777788888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh---hcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-c
Q 015136 100 TSGIGLLS---AFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI-T 174 (412)
Q Consensus 100 ~~i~~~~~---~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~ 174 (412)
.+++.+++ ..+++++.++++|+++|+|.|.. +...+++.|+.|+++|.+.+++.+..+.+|..+++.++..+.. .
T Consensus 101 ~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~ 180 (438)
T PRK10133 101 YALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSN 180 (438)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999775 46889999999999999999998 7888888888777777778999999999999999999876541 0
Q ss_pred -------------------------CChHHHHHHHH-HHHHHHHHH-HHhccCCchhhhhcCChHHHHHHHHHHHHhhCC
Q 015136 175 -------------------------LNWRWLLALSS-IPSFAVLLL-YSLAPESPRYLNVKGRTTEARNILDKIALLNKA 227 (412)
Q Consensus 175 -------------------------~~w~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (412)
.+||+.|+... +..++..+. ....||.+. ++.++.+
T Consensus 181 ~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~-----~~~~~~~------------ 243 (438)
T PRK10133 181 VPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS-----DNHSDAK------------ 243 (438)
T ss_pred CcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----ccccccc------------
Confidence 24566665433 322222222 222333211 0000000
Q ss_pred CCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015136 228 KLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSK 307 (412)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (412)
. ++...+.+++++++..+...+.. ++.....++...|.+.
T Consensus 244 -----------------------~--------------~~~~~~~~~ll~~~~~~~~~l~~---~~~~~~~~~~~~~~~~ 283 (438)
T PRK10133 244 -----------------------Q--------------GSFSASLSRLARIRHWRWAVLAQ---FCYVGAQTACWSYLIR 283 (438)
T ss_pred -----------------------c--------------cchhhhHHHHHhCchHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 0 00000223344444333222222 2222333333344444
Q ss_pred ccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 015136 308 LSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGL 387 (412)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 387 (412)
|.. .+..|.++.+.+.......++.++|+++++++.||+|+|+++..+..+..+.+++..+.++. .....
T Consensus 284 ~l~---------~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~ 353 (438)
T PRK10133 284 YAV---------EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGH-VGLIA 353 (438)
T ss_pred HHh---------hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCCh-HHHHH
Confidence 421 12257999999999999999999999999999999999999888877776666555544433 33455
Q ss_pred HHHHHHHHhhHhHHHHhhccCCCC
Q 015136 388 LVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
..+.+++.+..+|..++...|.+|
T Consensus 354 ~~l~glg~~~i~P~~~s~a~~~~~ 377 (438)
T PRK10133 354 LTLCSAFMSIQYPTIFSLGIKNLG 377 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc
Confidence 677888999999999998888776
No 35
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.97 E-value=2.7e-30 Score=235.64 Aligned_cols=321 Identities=26% Similarity=0.343 Sum_probs=240.8
Q ss_pred HHHHHHHhhHHHhhhhhhh-hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhc
Q 015136 31 GLAVFAEAMEIMILSFIGP-AVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAF 109 (412)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 109 (412)
+++.+....+.....+..| .+.+++|.|+++.+++.+++.++..+++++.|+++||+|||++++.+.++.+++..+..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 4566777778888888899 899999999999999999999999999999999999999999999999999999666666
Q ss_pred chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 015136 110 SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPS 188 (412)
Q Consensus 110 ~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~ 188 (412)
+++.+.+++.|++.|++.+.. +...+++.|++|+++|++++++.....++|..++|.+++.+.+..+||+.|++.+++.
T Consensus 82 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~ 161 (352)
T PF07690_consen 82 ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILS 161 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHH
T ss_pred hhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchh
Confidence 688889999999999999888 8889999999999999999999999999999999999999998899999999999888
Q ss_pred HHHHHH-HHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcc
Q 015136 189 FAVLLL-YSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKS 267 (412)
Q Consensus 189 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (412)
++..++ ..+.+++++....+++.++. ++.++
T Consensus 162 ~~~~il~~~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~ 193 (352)
T PF07690_consen 162 LIAAILFILFLPEPPPPRERESPKESE------------------------------------------------SKKPK 193 (352)
T ss_dssp HHHHHHHHCCC---STTTT--SSTTTT--------------------------------------------------HHH
T ss_pred hhhhhhHhhhhhhcccccccccccccc------------------------------------------------ccccc
Confidence 877553 34455443311111110000 00001
Q ss_pred cccc-hhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCC-CcchHHHHHHHHcchhhHH
Q 015136 268 GFSS-FLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMH-DSSLYLSVFLASLGELPGL 345 (412)
Q Consensus 268 ~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~ 345 (412)
+..+ ++.+++++..+ ......+...+.++....+.|.|.. +..|.+ ..+.+.......+..++++
T Consensus 194 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (352)
T PF07690_consen 194 PLKPGFKSLFKNPVLW---ILLIAFFLFFFVFSGFSFFLPLYLQ----------EVLGFSGPSQAGLLFSIFGIVGIIGS 260 (352)
T ss_dssp CCCH-CTHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHCC----------HHHHCCTHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccchhh---hhhhhhhHHHHHHHHhhcccchhhh----------hccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1112 34444444332 2222222333344456666666532 234677 5788888889999999999
Q ss_pred HHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 346 VLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQ---SNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 346 ~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
++.|++.||+++|+..........+..+.+.... +........++.+++.+...+....+..|.+|+
T Consensus 261 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 330 (352)
T PF07690_consen 261 LLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPP 330 (352)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHT
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 9999999999988887777777777766666522 345566667778888888899999999998874
No 36
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.97 E-value=5.8e-30 Score=241.90 Aligned_cols=288 Identities=15% Similarity=0.157 Sum_probs=223.2
Q ss_pred CCccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhh----------------------hcCCCcchhHHHHHHHHHHHHHH
Q 015136 19 FGKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKS----------------------EWGVSPSAESLLSTVVFAGNLVG 76 (412)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~s~~~~~~~~s~~~~~~~i~ 76 (412)
+.+.+|.+..+++++....+.++..++...+.+.+ +++++..+.|++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 46778889999999999999999999999888877 78999999999999999999999
Q ss_pred HHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHH
Q 015136 77 VYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS--PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIF 153 (412)
Q Consensus 77 ~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~ 153 (412)
+++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+.. +....++.|++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999999999999999988876543 56788999999999999998 88899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHH-HhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCC
Q 015136 154 STFWTLGSIFEAALAWIVMIT-LNWRWLLALSSIPSFAVLLLY-SLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPN 231 (412)
Q Consensus 154 ~~~~~~g~~~~~~~~~~l~~~-~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (412)
..+..+|..+++++++.+.+. .+||+.|++.+++.++..+.+ .+.+|+|+... + ..++.++..++ ..+
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~-~-~~~~~~~~i~~---~~~----- 242 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHP-C-ISKFEKKYINS---SLQ----- 242 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCC-C-CCHHHHHHHHh---hcc-----
Confidence 999999999999999999998 499999999988877665544 44556664211 1 11111111100 000
Q ss_pred CccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 015136 232 GMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSST 311 (412)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (412)
++ ..+ . +...+++++++.+ ..+......++....++....|.|.|+++
T Consensus 243 --------~~----~~~--~---------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lp~~l~~ 290 (465)
T TIGR00894 243 --------GQ----KGS--T---------------RQSLPIKAIPKSL---PVWAIWFAIFGHFWLYTILPTYLPTFISW 290 (465)
T ss_pred --------cc----cCC--C---------------CCCCCHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 0 0001344455443 33444555566667777778888887744
Q ss_pred ccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchh
Q 015136 312 QSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRK 358 (412)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr 358 (412)
. .|.+..+.++...+..++.+++.+++|+++||+++|
T Consensus 291 ~----------~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~ 327 (465)
T TIGR00894 291 V----------LRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSS 327 (465)
T ss_pred H----------hCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3 478888999999999999999999999999998644
No 37
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.97 E-value=2.6e-29 Score=230.36 Aligned_cols=320 Identities=17% Similarity=0.124 Sum_probs=239.7
Q ss_pred HHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc
Q 015136 31 GLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS 110 (412)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 110 (412)
..+.+....+.....+..|.+..+++.++.+.+++.+++.++..+++++.|+++||+|||++++.+.++.+++..+..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 35566666777778888899999999999999999999999999999999999999999999999999998888888777
Q ss_pred h-----hHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 015136 111 P-----NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALS 184 (412)
Q Consensus 111 ~-----~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~ 184 (412)
+ +++.+++.|++.|++.+.. +...+++.|++|+++|+++.++.+....+|..++|.+++.+.+..+||+.|++.
T Consensus 85 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~ 164 (365)
T TIGR00900 85 ALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVD 164 (365)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 7 9999999999999999988 888899999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhh
Q 015136 185 SIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITK 264 (412)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (412)
++..++..+..+.++++++.. +++++..++..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---------------------------------------------- 196 (365)
T TIGR00900 165 AVGFAISALLIVSVRIPELAA--SEIQALSNAVL---------------------------------------------- 196 (365)
T ss_pred HHHHHHHHHHHHhcccccCCC--ccccccchhHH----------------------------------------------
Confidence 776655544433332211100 00000000000
Q ss_pred hcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHH-HhhhcccccccccccccccccCCCCcchHHHHHHHHcchhh
Q 015136 265 LKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGII-LMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELP 343 (412)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (412)
++..+.++.+++++..+....... .....+.... .+.|.+.++. .|.++.+.+.......++.++
T Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 262 (365)
T TIGR00900 197 -RDTREGIKFVLKNPLLRTLLLLAL---LFNLVFAPAIVALFPYVQSKY----------LGRGSTHYGWVLAAFGLGALL 262 (365)
T ss_pred -HHHHhHHHHHHcCcHHHHHHHHHH---HHHHHHHHHHHHHhHHHHHHH----------hCCchHHHHHHHHHHHHHHHH
Confidence 000012334444443333322222 2222222222 4445444321 367888889999999999999
Q ss_pred HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 344 GLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQS-NILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 344 g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
++++.+++.||.+||+.+..+..+.+++.+.+.+..+ .+...+..++.+++.+...+...++..|..|+
T Consensus 263 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 332 (365)
T TIGR00900 263 GALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPA 332 (365)
T ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 9999999999999999998887777777777766553 55566677778888888888888888888874
No 38
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=2.7e-29 Score=218.87 Aligned_cols=322 Identities=19% Similarity=0.193 Sum_probs=256.6
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
++.+++.+.+..+........+..++++.+.+.+++|+|++|.+++.++..+...+..++.|.+.||+|.|++...+.++
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 45566777777888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhH---HHHHHHHHHHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015136 100 TSGIGLLSAFSPNY---ISLVTLRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN 176 (412)
Q Consensus 100 ~~i~~~~~~~~~~~---~~~~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 176 (412)
..+-.+..+++.+. +.+++.+.+.|++.+...+..+++++++|++++|.++|+.. ..++|..+...++..+....+
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g 167 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFG 167 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHh
Confidence 99999988887644 59999999999997777899999999999999999999999 999999999999999999888
Q ss_pred ---hHHHHHHHHHHHHHH-HHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCC
Q 015136 177 ---WRWLLALSSIPSFAV-LLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNT 252 (412)
Q Consensus 177 ---w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (412)
||.+..+..+..++. +..++...|.|......++... .
T Consensus 168 ~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~--~------------------------------------ 209 (417)
T COG2223 168 FLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP--A------------------------------------ 209 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch--h------------------------------------
Confidence 999988888777765 4456666666542111110000 0
Q ss_pred CcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHH
Q 015136 253 PLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYL 332 (412)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (412)
.++.+++. +.+|..++.++.....+.++..+.|.|.++. ++.++..++.
T Consensus 210 ------------------~~~~v~~~---~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~----------fg~~~~~Ag~ 258 (417)
T COG2223 210 ------------------QLKAVFSN---KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQ----------FGLSPVTAGL 258 (417)
T ss_pred ------------------HHHHHhcC---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCChhhHHH
Confidence 12222222 4556677777777778888888888888554 6899999999
Q ss_pred HHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhh-------hhHHHHHHHHHHHHHHhhHhHHHHhh
Q 015136 333 SVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQ-------SNILITGLLVGARMFAFGAFTIACIF 405 (412)
Q Consensus 333 ~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (412)
......+.+.+.++.+|+++||+|.++++...+..++++..++.... +........+..+.+.+......+-.
T Consensus 259 ~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~ 338 (417)
T COG2223 259 IAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKM 338 (417)
T ss_pred HHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheee
Confidence 99999999999999999999999999999999999998888887643 23333443444455555555555555
Q ss_pred ccCCCC
Q 015136 406 TPEQLG 411 (412)
Q Consensus 406 ~~e~~P 411 (412)
++.++|
T Consensus 339 Ip~if~ 344 (417)
T COG2223 339 IPVIFP 344 (417)
T ss_pred chHHHH
Confidence 555444
No 39
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.97 E-value=3.2e-29 Score=229.05 Aligned_cols=312 Identities=13% Similarity=0.074 Sum_probs=221.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHhhhhhhhhhhh-hcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHH
Q 015136 23 QYLVFAYAGLAVFAEAMEIMILSFIGPAVKS-EWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITS 101 (412)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 101 (412)
.++.+.+..++.+........+++..+.+.+ ++|+|++|.+++.+++.+++.++.++.|++.||+|.|+++.++.++++
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 4567778888888899999999999999876 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcc-----hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHH---
Q 015136 102 GIGLLSAFS-----PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVM--- 172 (412)
Q Consensus 102 i~~~~~~~~-----~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~--- 172 (412)
+..+.++++ ++++.+++.|++.|++ +.. +.....+++++|+++||+++|+.....++|..+++++...+.
T Consensus 112 i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~ 190 (462)
T PRK15034 112 IPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVP 190 (462)
T ss_pred HHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 999988876 8999999999999998 545 888899999999999999999998777777777666665433
Q ss_pred --h-------------cCChHHHHHHHHHHHHHHHHHH-HhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCcccc
Q 015136 173 --I-------------TLNWRWLLALSSIPSFAVLLLY-SLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVS 236 (412)
Q Consensus 173 --~-------------~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (412)
+ ..+||.+.++..++.++..+.. ++.++.|. .+.+.
T Consensus 191 l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~~~~------------------------- 242 (462)
T PRK15034 191 VFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SRASI------------------------- 242 (462)
T ss_pred HHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---cccCH-------------------------
Confidence 2 2347887777777666554443 33333221 00000
Q ss_pred ccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc
Q 015136 237 DATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCG 316 (412)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (412)
++....+|.+ .++..+..+++....+.++..+.|.|.++.
T Consensus 243 ---------------------------------~~~~~vlk~~---~~Wllslly~~tFG~fvg~s~~lp~~~~~~---- 282 (462)
T PRK15034 243 ---------------------------------ADQLPVLQRL---HLWLLSLLYLATFGSFIGFSAGFAMLAKTQ---- 282 (462)
T ss_pred ---------------------------------HHHHHHhCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 0222233333 345555666666666666777777776432
Q ss_pred cccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh-hh-----hhHHHHHHHHH
Q 015136 317 TTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAM-LQ-----SNILITGLLVG 390 (412)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~-~~-----~~~~~~~~~~~ 390 (412)
++............+...++++++|+++||+|+++++.++.+...++...+.. .+ +.+...+..+.
T Consensus 283 --------~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~ 354 (462)
T PRK15034 283 --------FPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMG 354 (462)
T ss_pred --------cChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHH
Confidence 33333333344456778889999999999999999999888877776644332 21 22333333333
Q ss_pred HHHHHhhHhHHHHhhccCCCC
Q 015136 391 ARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 391 ~~~~~~~~~~~~~~~~~e~~P 411 (412)
..++.+..+...+-++++.+|
T Consensus 355 l~~~~G~gngsvfk~ip~~f~ 375 (462)
T PRK15034 355 LFLTAGLGSGSTFQMIAVIFR 375 (462)
T ss_pred HHHHhcccchHHHHhhHHHHh
Confidence 334444444555555555444
No 40
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=3.7e-29 Score=230.23 Aligned_cols=297 Identities=16% Similarity=0.160 Sum_probs=220.4
Q ss_pred HHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 015136 27 FAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLL 106 (412)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 106 (412)
+....+..+..+.......+..|.+.+++|.|.++.|+..+.+.+++.+++++.|+++||+|||+++..+..+.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l 84 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAM 84 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 34445566777777788888999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 015136 107 SAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSS 185 (412)
Q Consensus 107 ~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~ 185 (412)
+++++|++.+++.|++.|++.+.. +....++.|++|+++|++++++...+..+|..+++++++.+.+..+||+.|++.+
T Consensus 85 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~ 164 (382)
T PRK10091 85 FTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIA 164 (382)
T ss_pred HHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHH
Confidence 999999999999999999999987 7777788899999999999999999999999999999999999899999999988
Q ss_pred HHHHHHHH-HHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhh
Q 015136 186 IPSFAVLL-LYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITK 264 (412)
Q Consensus 186 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (412)
+..++..+ ...++||.++ +++. +.++
T Consensus 165 ~~~~~~~~~~~~~lp~~~~----~~~~-~~~~------------------------------------------------ 191 (382)
T PRK10091 165 VFNIAVLASIYFWVPDIRD----EAKG-GLRE------------------------------------------------ 191 (382)
T ss_pred HHHHHHHHHHHHhCCCCCc----cccc-CHHH------------------------------------------------
Confidence 77665543 3455666432 0000 0000
Q ss_pred hcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhH
Q 015136 265 LKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPG 344 (412)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 344 (412)
.++.+.+++. +. .....+......+....+.+.+.. +..|.++.+.+.......++.+++
T Consensus 192 ------~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~----------~~~g~s~~~~~~~~~~~~~~~~ig 251 (382)
T PRK10091 192 ------QFHFLRSPAP-WL---IFAATMFGNAGVFAWFSYIKPYMM----------FISGFSETSMTFIMMLVGLGMVLG 251 (382)
T ss_pred ------HHHHhcChHH-HH---HHHHHHHHHHHHHHHHHHHHHHHH----------HhcCCCHHHHHHHHHHHHHHHHHH
Confidence 1111111211 11 111111111222222222332332 224688889999999999999999
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHHh
Q 015136 345 LVLAGIIVDRAGRKLSLTIMLILVFICILPLAM-LQSNILITGLLVGARMFAF 396 (412)
Q Consensus 345 ~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~ 396 (412)
+++.|++.||+++|+.+..+..+.+++.+++.. .++.+...+..++.+.+..
T Consensus 252 ~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~ 304 (382)
T PRK10091 252 NLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLF 304 (382)
T ss_pred hHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 999999999999999998888887777765543 3333333333344444333
No 41
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.97 E-value=1.2e-28 Score=228.98 Aligned_cols=318 Identities=15% Similarity=0.074 Sum_probs=234.0
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
+++.+.....+.+..+........+.+..|.+.+++|.|+++.++..+.+.+++.+++++.|+++||+|||++++.+..+
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 45567777777788888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 015136 100 TSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWR 178 (412)
Q Consensus 100 ~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 178 (412)
.+++.++...+++++.+++.|++.|++.+.. +...+++.|.+|+++|+++.++......+|..++|.+++.+.++.+||
T Consensus 88 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~ 167 (406)
T PRK15402 88 FILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWR 167 (406)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcc
Confidence 9999999999999999999999999999887 777888899999999999999998888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-HHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccc
Q 015136 179 WLLALSSIPSFAVLLL-YSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTS 257 (412)
Q Consensus 179 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (412)
+.|++.++..++..+. ....||+++... ++.+.++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---------------------------------------- 204 (406)
T PRK15402 168 GMFVLFAALAALSFFGLWRAMPETAGRVG---EKLSLKEL---------------------------------------- 204 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcccc---ccccHHHH----------------------------------------
Confidence 9999888777665443 445566532110 00000000
Q ss_pred hhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHH
Q 015136 258 SRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLA 337 (412)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (412)
..+++.+++++..+... ...+......+....+.|.+.. +..|.++.+.+......
T Consensus 205 -----------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~----------~~~g~~~~~~g~~~~~~ 260 (406)
T PRK15402 205 -----------GRDYKLVLKNRRFVAGA---LALGLVSLPLLAWIALSPVILI----------SGEQLSSYEYGLLQVPV 260 (406)
T ss_pred -----------HHHHHHHHcCcHHHHHH---HHHHHHHHHHHHHHHHhHHHHH----------HHhCCCHHHHHHHHHHH
Confidence 00233334443332222 2222222223333333444432 22467777778777777
Q ss_pred HcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHHHHHhhHhHHHHh
Q 015136 338 SLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAML-----QSNILITGLLVGARMFAFGAFTIACI 404 (412)
Q Consensus 338 ~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (412)
.++.++++++.+++.||+++|+.+.++.++..++.+.+... .+.++.....++.+++.+...+....
T Consensus 261 ~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~ 332 (406)
T PRK15402 261 FGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYR 332 (406)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 78889999999999999999999988888777766666542 22334445555666666655554433
No 42
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.97 E-value=8.3e-29 Score=232.70 Aligned_cols=342 Identities=13% Similarity=0.167 Sum_probs=223.9
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
++++|.++...++.....+.++..++...|.+.++ |+|+++.+++.+.+.+++.+++++.|+++||+|||++++.+.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~ 102 (452)
T PRK11273 24 RRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 102 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHH
Confidence 44566666666677777777777788888999888 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcc----hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHH-HHHHHHHHHHh
Q 015136 100 TSGIGLLSAFS----PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSI-FEAALAWIVMI 173 (412)
Q Consensus 100 ~~i~~~~~~~~----~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~ 173 (412)
.+++.+++++. .+++.+++.|++.|++.+.. +.....+.|++|+++|++++++.+.+.++|.. .+|+++..+..
T Consensus 103 ~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 182 (452)
T PRK11273 103 AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW 182 (452)
T ss_pred HHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99998888765 37888899999999999887 76677788999999999999999999999864 45554444444
Q ss_pred cCChHHHHHHHHHHHHHH-HHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCC
Q 015136 174 TLNWRWLLALSSIPSFAV-LLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNT 252 (412)
Q Consensus 174 ~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (412)
..+||+.|++.+++.++. ++..+++||+|+....++ .++.++ +. + ++ .+.++.++.
T Consensus 183 ~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~---------~~--~---------~~--~~~~~~~~~ 239 (452)
T PRK11273 183 FNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPP-IEEYKN---------DY--P---------DD--YNEKHEQEL 239 (452)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCC-hhhhhh---------cc--c---------cc--cccccCCCc
Confidence 459999999988776665 455667788765311110 000000 00 0 00 000000000
Q ss_pred Ccccchhhhhhhhcccccch-hhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchH
Q 015136 253 PLLTSSRIRITKLKSGFSSF-LLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLY 331 (412)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (412)
+ . .+ .+ +.+++++ .++...+..++.....++...+.|.|.++. .|++..+++
T Consensus 240 ~-~--~~-----------~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~----------~g~s~~~~~ 292 (452)
T PRK11273 240 T-A--KQ-----------IFMQYVLPNK---LLWYIAIANVFVYLLRYGILDWSPTYLKEV----------KHFALDKSS 292 (452)
T ss_pred c-H--HH-----------HHHHHHHcCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCCHHHHH
Confidence 0 0 00 01 1122222 233344444444455667777888877443 367777888
Q ss_pred HHHHHHHcchhhHHHHHHHHHHhh--chhhHH-HHHHHHHHHHHHHHHhh--hhhHHHHHHHHHHHHHHhhHhHHHHhhc
Q 015136 332 LSVFLASLGELPGLVLAGIIVDRA--GRKLSL-TIMLILVFICILPLAML--QSNILITGLLVGARMFAFGAFTIACIFT 406 (412)
Q Consensus 332 ~~~~~~~~~~~~g~~~~g~l~dr~--grr~~l-~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (412)
.......++.+++++++|+++||+ +||... .....+..++.+.+... .+.+...+..+..+....+.......+.
T Consensus 293 ~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 372 (452)
T PRK11273 293 WAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHA 372 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 888888899999999999999999 455432 22223333333333222 2222233333444443333333344556
Q ss_pred cCCCCC
Q 015136 407 PEQLGW 412 (412)
Q Consensus 407 ~e~~P~ 412 (412)
.|.+|+
T Consensus 373 ~~~~p~ 378 (452)
T PRK11273 373 LELAPK 378 (452)
T ss_pred HHHcCh
Confidence 677764
No 43
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=3.4e-29 Score=229.64 Aligned_cols=326 Identities=17% Similarity=0.196 Sum_probs=226.6
Q ss_pred HHHHHHHHHhhHHHhhhhhhhh-hhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHh
Q 015136 29 YAGLAVFAEAMEIMILSFIGPA-VKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLS 107 (412)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 107 (412)
..+++.+........+++..|. +.+++|+|+.+.+++.+++.+++.+++++.|+++||+|||+.++++.++.+++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 4566677777788888999995 999999999999999999999999999999999999999999999999999999999
Q ss_pred hcch-hHHHHHHHHHHHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh----------cCC
Q 015136 108 AFSP-NYISLVTLRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI----------TLN 176 (412)
Q Consensus 108 ~~~~-~~~~~~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----------~~~ 176 (412)
++++ +++.+++.|++.|++.+..+...++++|++|+++|++++++.....++|..+++.+++.+.+ +.+
T Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~ 164 (366)
T TIGR00886 85 GLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLA 164 (366)
T ss_pred HHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 9999 99999999999999866555567889999999999999999998888888888887776654 348
Q ss_pred hHHHHH-HHHHHHHHH-HHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCc
Q 015136 177 WRWLLA-LSSIPSFAV-LLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPL 254 (412)
Q Consensus 177 w~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (412)
||+.|+ ..+++..+. .+...+.+|+|+.. ++ +.+. +.. .+ ... .+++
T Consensus 165 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~--------~~~------------~~----~~~-~~~~- 213 (366)
T TIGR00886 165 WGWAFVIVPAGILLLPALLIFFVGADTPPGK----PA-TGKL--------SFK------------GA----RWS-VGTG- 213 (366)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhcccCCccc----cc-chhc--------ccc------------cc----ccc-ccch-
Confidence 999994 434444433 34445556655311 00 0000 000 00 000 0000
Q ss_pred ccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHH
Q 015136 255 LTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSV 334 (412)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (412)
..++..+.++++.. +......+......+....+.+.|.++. .|.++.+.+...
T Consensus 214 -------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~~~~~~~ 267 (366)
T TIGR00886 214 -------------ALGDQLKVFRDRHT---WILALLYSVTFGSFLGVSSIFAMFFKDQ----------FGLSKVTAGAYA 267 (366)
T ss_pred -------------hHHHHHHHHhccch---hhHHHHHHHHHHHHHHHHHHHHHHHHHH----------cCCcHHHHHHHH
Confidence 00012222333222 2222333333344455556666665332 468888888888
Q ss_pred HHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh--hh--hhHHHHHHHHHHHHHHhhHhHHHHhhccCCC
Q 015136 335 FLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAM--LQ--SNILITGLLVGARMFAFGAFTIACIFTPEQL 410 (412)
Q Consensus 335 ~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 410 (412)
....+.++++++++|+++||+|+|+.+..+......+.+++.+ .. +.........+..++.+...+..++..+|+.
T Consensus 268 ~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 347 (366)
T TIGR00886 268 SLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIF 347 (366)
T ss_pred HHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhc
Confidence 8889999999999999999999988877777666666555543 22 3333344444455555555666777777776
Q ss_pred C
Q 015136 411 G 411 (412)
Q Consensus 411 P 411 (412)
|
T Consensus 348 ~ 348 (366)
T TIGR00886 348 R 348 (366)
T ss_pred h
Confidence 5
No 44
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.97 E-value=9.4e-29 Score=229.29 Aligned_cols=309 Identities=17% Similarity=0.094 Sum_probs=221.5
Q ss_pred HHHHHHHHHHHHHHhhHHHhhhhhhhh-hhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHH
Q 015136 24 YLVFAYAGLAVFAEAMEIMILSFIGPA-VKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSG 102 (412)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i 102 (412)
++.+..+.+..+....+..+..+.+|. +.+++|.|+++.|++.+++.+++.+++++.|+++||+|||++++.+.++.++
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCAL 93 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHH
Confidence 344455666677777777888888886 6788999999999999999999999999999999999999999999998888
Q ss_pred HHHHhhcc--------hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015136 103 IGLLSAFS--------PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI 173 (412)
Q Consensus 103 ~~~~~~~~--------~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 173 (412)
+.+.+.++ .+++.+++.|+++|++.+.. +...+++.|++|+++|++++++...+..+|..+++.+++.+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 173 (399)
T PRK05122 94 SGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH 173 (399)
T ss_pred HHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 76655432 25678899999999999987 7777888999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCC
Q 015136 174 TLNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTP 253 (412)
Q Consensus 174 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (412)
..|||+.+++..+..++..+.....|++++ +++++.
T Consensus 174 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----------------------------------------- 209 (399)
T PRK05122 174 WGGLAGLGLLIMLLALLGLLLARPRPAVPP---VKGERL----------------------------------------- 209 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhcCCCCCC---CCccch-----------------------------------------
Confidence 999999888766554433322221222110 000000
Q ss_pred cccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHH
Q 015136 254 LLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLS 333 (412)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (412)
++++.+++ .++.. .......+.+.....+.+.+..+. |. ...+..
T Consensus 210 -----------------~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-----------~~--~~~~~~ 254 (399)
T PRK05122 210 -----------------PFRRVLGR-VWPYG----MGLALASIGFGTIATFITLYYAAR-----------GW--DGAALA 254 (399)
T ss_pred -----------------hHHHHHHH-HHHHH----HHHHHHHHHHHHHHHHHHHHHHHc-----------cc--ccchHH
Confidence 01111111 01111 111112223333444445444222 23 234555
Q ss_pred HHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 334 VFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 334 ~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
.....++.++++++.|++.||+++|+.+..+..+.+++.+++...++.+...+..++.+++.+..++.......|.+|
T Consensus 255 ~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~ 332 (399)
T PRK05122 255 LTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVP 332 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCC
Confidence 667788889999999999999999999988888888887777766666666666777888777777777777777666
No 45
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=3.1e-28 Score=233.17 Aligned_cols=323 Identities=33% Similarity=0.447 Sum_probs=254.7
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-
Q 015136 52 KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG- 130 (412)
Q Consensus 52 ~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~- 130 (412)
.+.++.+.....+..+++++|..+|++++|+++||+|||++++++.++..++.++.++++|++.+++.|++.|++.+..
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 4666778888999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCC
Q 015136 131 PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGR 210 (412)
Q Consensus 131 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (412)
.+...++.|+.++++|+.+..+ ......+..+++..++++.. +||+.+++..++.++.++.+++.+|+|+|+..+++
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~ 266 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGR 266 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCc
Confidence 8889999999999999999999 77777788888888888877 89999999999988887777777799999999999
Q ss_pred hHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchh-hHHHHHHHHH
Q 015136 211 TTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSR-LVRTTLLLWM 289 (412)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~ 289 (412)
.+++.+..++..+.|+............. + .+..+.....+...+.++++.+ ..+.++...+
T Consensus 267 ~~~a~~~l~~~a~~n~~~~~~~~~~~~~~-~----------------~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~ 329 (521)
T KOG0255|consen 267 IDEAIKILKKIAKLNGRKLSVKELLRLEL-L----------------LRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLF 329 (521)
T ss_pred hHHHHHHHHHHHhhcCCCCCcHHHHHHHH-H----------------hhHhhhhccCCCCchhhhhcCHHHHHHHHHHHH
Confidence 99999988887766522211111110000 0 0000000001112456666654 6777777888
Q ss_pred HHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHH
Q 015136 290 LFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVF 369 (412)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~ 369 (412)
.++.....+|+.......+. ..........+.....+....+...|++|||..+..+..+..
T Consensus 330 ~~~~~~~~y~gl~~~~~~lg------------------~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~ 391 (521)
T KOG0255|consen 330 IWFVFSLVYYGLSLNVSGLG------------------GNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAG 391 (521)
T ss_pred HHHHHhHHHHhhhhhhhhcC------------------chHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 88888888888876665332 334555556666788888888999999999999999999999
Q ss_pred HHHHHHHhhhhhH---HHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 370 ICILPLAMLQSNI---LITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 370 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
++++...+..... ...+...+..++.+..+...+.+.+|++|+
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt 437 (521)
T KOG0255|consen 392 IGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPT 437 (521)
T ss_pred HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccH
Confidence 9999888744332 456666667777777888889999999995
No 46
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=9.1e-28 Score=227.50 Aligned_cols=362 Identities=17% Similarity=0.138 Sum_probs=240.1
Q ss_pred HHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 015136 26 VFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGL 105 (412)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 105 (412)
.+..++++.+....+....++..|.+.+++|.|+.+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 34556677788888888889999999999999999999999999999999999999999999999999999999999998
Q ss_pred HhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 015136 106 LSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALS 184 (412)
Q Consensus 106 ~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~ 184 (412)
++.++++++.+++.|+++|++.+.. +...+++.|++|+++|+++.++.....++|..++|.+++.+.++.+||+.|.+.
T Consensus 91 ~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~ 170 (471)
T PRK10504 91 FCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLIN 170 (471)
T ss_pred HHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHH
Confidence 8889999999999999999999988 888889999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHH-HHhccCCchhhhhcCChHHHHHHHH---H---HHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccc
Q 015136 185 SIPSFAVLLL-YSLAPESPRYLNVKGRTTEARNILD---K---IALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTS 257 (412)
Q Consensus 185 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (412)
.....+..+. ....|+.+. ++.+.+....... . ....++.+. .... .......... ......-
T Consensus 171 ~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~-----~~~~~~~ 240 (471)
T PRK10504 171 IPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKG-LGLS-PLAIAGLVAV-----GVVALLL 240 (471)
T ss_pred HHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCc-CCcc-hHHHHHHHHH-----HHHHHHH
Confidence 7666555433 344444332 1112221111000 0 000000000 0000 0000000000 0000000
Q ss_pred hhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHH
Q 015136 258 SRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLA 337 (412)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (412)
...++++.+++..+.+ +++++..+......+ .....+.....+.|.|.+. ..|.++...++.....
T Consensus 241 ~~~~~~~~~~~~~~~~-l~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~----------~~g~~~~~~g~~~~~~ 306 (471)
T PRK10504 241 YLLHARNNNRALFSLK-LFRTRTFSLGLAGSF---AGRIGSGMLPFMTPVFLQI----------GLGFSPFHAGLMMIPM 306 (471)
T ss_pred HHHHHhcCCCCccCHH-HhcccchHHHHHHHH---HHHHHHHHHHHHHHHHHHH----------HcCCCHHHHHHHHHHH
Confidence 0000000011111222 334333333322222 2222333333445544432 2467888889888888
Q ss_pred HcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhh--h-hHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 338 SLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQ--S-NILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 338 ~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
.++.+++.++.+++.||+|||+.+..+..+.++..+++.+.. + .+......++.+++.+..++.......+..|
T Consensus 307 ~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 383 (471)
T PRK10504 307 VLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLP 383 (471)
T ss_pred HHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 888899999999999999999999988887777766665522 2 2222334455556666666777777666665
No 47
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.97 E-value=7.7e-29 Score=228.34 Aligned_cols=331 Identities=16% Similarity=0.234 Sum_probs=226.5
Q ss_pred HHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchh
Q 015136 33 AVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPN 112 (412)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 112 (412)
.++..+.++..++...|.+.+++|.|.++.+++.+++.++..+++++.|+++||+|||++++.+.++.+++.++..++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 82 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTS 82 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhh
Confidence 45667788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHH-HHHHHHHhcCChHHHHHHHHHHHHH
Q 015136 113 YISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEA-ALAWIVMITLNWRWLLALSSIPSFA 190 (412)
Q Consensus 113 ~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~w~~~~~~~~~~~~~ 190 (412)
++.+++.|++.|++.+.. +...+++.|++|+++|++++++.+.+..+|..+++ .++..+.+..+||+.|++.+++.++
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAII 162 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 999999999999999988 88889999999999999999999999999999999 5777777888999999988876665
Q ss_pred H-HHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccc
Q 015136 191 V-LLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGF 269 (412)
Q Consensus 191 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (412)
. ++..++.+|+|+....++.++ . . .+ +.+.+++. +++..+ ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~--------------~--~-----~~-~~~~~~~~----~~~~~~----------~~~ 206 (379)
T TIGR00881 163 VSLICFLLLRDSPQSCGLPPAEE--------------M--P-----NE-EPDGDAEK----KEEELT----------KKQ 206 (379)
T ss_pred HHHHHheeeCCCccccccCcccc--------------C--c-----cc-cccccccc----cccccc----------chH
Confidence 5 444555666553110000000 0 0 00 00000000 000000 000
Q ss_pred cchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHH
Q 015136 270 SSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAG 349 (412)
Q Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g 349 (412)
...+.+++.+.. +...+..+...........+.|.+.++ ..|.++.+.+.......++.++++++.|
T Consensus 207 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~g 273 (379)
T TIGR00881 207 IFLQYVLLNKVL---WYISLGYVFVYVVRTGILDWSPLYLTQ----------EKGFSKEKASWAFTLYELGGLVGTLLAG 273 (379)
T ss_pred HHHHHHHhcchH---HHHHHHHHHHHHHHHHHHHHHHHHHHH----------HhCCCHHHHHHHHHHHHHHcchhHHHHH
Confidence 022233333322 223333333344445555566665532 2468888889999999999999999999
Q ss_pred HHHHhhc-hhhH-HHHHH-HHHHHHHHHHHh--hhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 350 IIVDRAG-RKLS-LTIML-ILVFICILPLAM--LQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 350 ~l~dr~g-rr~~-l~~~~-~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
++.||.. +|+. +.... ....++...+.. ..+.....+..++.++...+..+....+..|.+|+
T Consensus 274 ~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 341 (379)
T TIGR00881 274 WLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPK 341 (379)
T ss_pred HHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCc
Confidence 9999864 3332 22222 222222222222 22333334444555555555556666777887764
No 48
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=4.2e-28 Score=224.34 Aligned_cols=304 Identities=15% Similarity=0.075 Sum_probs=210.5
Q ss_pred HHHHHHHHHhhHHHhhhhhhhh-hhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHh
Q 015136 29 YAGLAVFAEAMEIMILSFIGPA-VKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLS 107 (412)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 107 (412)
.+.++.+..........+.+|. +.+++|.|+++.|++.+++.+++.+++++.|+++||+|||++++.+.+...++.+..
T Consensus 19 ~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~ 98 (392)
T PRK12382 19 RIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAY 98 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 3444455556666677777775 578999999999999999999999999999999999999999999988877665432
Q ss_pred ---hc-----chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 015136 108 ---AF-----SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWR 178 (412)
Q Consensus 108 ---~~-----~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 178 (412)
.. .++++.+++.|+++|++.+.. +...+++.|+.|+|+|++++++.+.+..+|..++|++++.+.+..|||
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 178 (392)
T PRK12382 99 LLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFA 178 (392)
T ss_pred HhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChH
Confidence 21 357889999999999999887 777788899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccch
Q 015136 179 WLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSS 258 (412)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (412)
+.+.+..+..++........||.++ ++++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---------------------------------------------- 209 (392)
T PRK12382 179 ALALTTMVLPLLAWAFNGTVRKVPA---HAGERP---------------------------------------------- 209 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCC---CcccCc----------------------------------------------
Confidence 8776654433322222111222110 000000
Q ss_pred hhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHH
Q 015136 259 RIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLAS 338 (412)
Q Consensus 259 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (412)
+.++..+........ .+.....+.....+.+.+..+. +.+ ..+.......
T Consensus 210 ------------~~~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~-----------~~~--~~~~~~~~~~ 259 (392)
T PRK12382 210 ------------SLWSVVGLIWKPGLG-----LALQGVGFAVIGTFVSLYFASK-----------GWA--MAGFTLTAFG 259 (392)
T ss_pred ------------hHHHHHHHHHHhHHH-----HHHHHHHHhHHHHHHHHHHHhc-----------CCc--hhHHHHHHHH
Confidence 000001100001111 1111222233334444444222 233 3455566677
Q ss_pred cchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 339 LGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 339 ~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
++.++++++.|++.||+|+|+.+..+..+.+++.+++.+.++.+...+..++.+++.+..++...+...|.+|
T Consensus 260 ~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 332 (392)
T PRK12382 260 GAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVP 332 (392)
T ss_pred HHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC
Confidence 7788999999999999999999998888888887777666655555566667777777777777777777665
No 49
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=1.3e-27 Score=221.74 Aligned_cols=306 Identities=17% Similarity=0.180 Sum_probs=223.6
Q ss_pred HHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhH
Q 015136 34 VFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNY 113 (412)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 113 (412)
.....+....+.+..|.+.+++|.++++.++..+++.+++.++++++|+++||+|||+.+..+.++.+++.+++.+++++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 94 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESA 94 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCH
Confidence 44455566777888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 015136 114 ISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVL 192 (412)
Q Consensus 114 ~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~ 192 (412)
+.+++.|++.|++.+.. +...+++.|++|++++++..+.......+|..++|.+++.+.++.+||+.|++.++..++..
T Consensus 95 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 174 (401)
T PRK11043 95 AQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLI 174 (401)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Confidence 99999999999998876 66667889999999999999999999999999999999999999999999999887777665
Q ss_pred HHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccch
Q 015136 193 LLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSF 272 (412)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (412)
+..++++|+++. ++.++.+ .++
T Consensus 175 ~~~~~~~~~~~~----~~~~~~~------------------------------------------------------~~~ 196 (401)
T PRK11043 175 LPTLRLKPSKKA----RKQSQDA------------------------------------------------------LTF 196 (401)
T ss_pred HHHHHcCCCCCc----cccchHH------------------------------------------------------HHH
Confidence 555555554321 0000000 022
Q ss_pred hhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHH
Q 015136 273 LLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIV 352 (412)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~ 352 (412)
+++++++..+.... ........++....+.|.+.+ +.|.++.+.++......++.++|+++.+++.
T Consensus 197 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~-----------~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~ 262 (401)
T PRK11043 197 KQLLKSKTYLGNVL---IFAACSAAFFAWLTGSPFILE-----------QMGYSPADIGLSYVPQTIAFLVGGYGCRAAL 262 (401)
T ss_pred HHHHcChhHHHHHH---HHHHHHHHHHHHHHHhHHHHH-----------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23333332222111 112222333444445555542 2468888888888888888899999999999
Q ss_pred HhhchhhHHHHHHHHHHHHHHHHH---h--hhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 353 DRAGRKLSLTIMLILVFICILPLA---M--LQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 353 dr~grr~~l~~~~~~~~~~~~~l~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
||+++|+.+.......+++.+.+. . .++.+...+...+.+++.+..++.......|..|
T Consensus 263 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (401)
T PRK11043 263 QKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP 326 (401)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc
Confidence 999988876655554444433322 1 2233334444555666777777877776666555
No 50
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=1.3e-27 Score=221.54 Aligned_cols=310 Identities=14% Similarity=0.045 Sum_probs=219.6
Q ss_pred HHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 015136 27 FAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLL 106 (412)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 106 (412)
...+.+..+..........+.+|.+.+++|.+.++.++..+++.+++.+++++.|+++||+|||++++.+.++++++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 97 (413)
T PRK15403 18 PMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAA 97 (413)
T ss_pred HHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 33445555566677888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 015136 107 SAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSS 185 (412)
Q Consensus 107 ~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~ 185 (412)
+..++|++.++++|+++|++.+.. +....++.|++|+++|++++++......+|..++|.+++.+.++.|||+.|++.+
T Consensus 98 ~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~ 177 (413)
T PRK15403 98 TLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIA 177 (413)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 999999999999999999998865 5566788899999999999999999999999999999999999899999999988
Q ss_pred HHHHHHHHH-HHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhh
Q 015136 186 IPSFAVLLL-YSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITK 264 (412)
Q Consensus 186 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (412)
+..++..+. ++.+||+++. ++++.+.+.
T Consensus 178 ~~~~i~~~~~~~~lp~~~~~---~~~~~~~~~------------------------------------------------ 206 (413)
T PRK15403 178 VMGLIAFVGLLLAMPETVKR---GAVPFSAKS------------------------------------------------ 206 (413)
T ss_pred HHHHHHHHHHHHhCCCCccc---cCCCCChHH------------------------------------------------
Confidence 877766544 4557776431 000000000
Q ss_pred hcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhH
Q 015136 265 LKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPG 344 (412)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 344 (412)
..++++.+++++..+ ............++....+.|.+.++. .|.++.+.++.......+.+++
T Consensus 207 ---~~~~~~~ll~~~~~~---~~~l~~~~~~~~~~~~~~~~P~~l~~~----------~g~s~~~~gl~~~~~~~~~~i~ 270 (413)
T PRK15403 207 ---VLRDFRNVFRNRLFL---TGAATLSLSYIPMMSWVAVSPVILIDA----------GGMTTSQFAWTQVPVFGAVIVA 270 (413)
T ss_pred ---HHHHHHHHHcCHHHH---HHHHHHHHHHHHHHHHHHhChHHHHHh----------cCCCHHHHHHHHHHHHHHHHHH
Confidence 001333444443333 233333334444555556667665433 4688888888888788888888
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh----hhhhH-HHHHHHHHHHHHHhhHhHHHH
Q 015136 345 LVLAGIIVDRAGRKLSLTIMLILVFICILPLAM----LQSNI-LITGLLVGARMFAFGAFTIAC 403 (412)
Q Consensus 345 ~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~ 403 (412)
+.+.+.+.+|..+++.......+..++.+.+.. ..+.+ ..++..++.+++.+...|...
T Consensus 271 ~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~ 334 (413)
T PRK15403 271 NAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLF 334 (413)
T ss_pred HHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHH
Confidence 888887765544333332222222222222211 12222 234455556666666666665
No 51
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.97 E-value=3.8e-28 Score=227.89 Aligned_cols=346 Identities=11% Similarity=0.055 Sum_probs=236.9
Q ss_pred CCccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHH
Q 015136 19 FGKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAM 98 (412)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~ 98 (412)
.+.++|.++..+.+...........++...|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.+
T Consensus 13 ~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~ 92 (455)
T TIGR00892 13 DGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGL 92 (455)
T ss_pred CCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHH
Confidence 35667888877777766666666678888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHH-HHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015136 99 ITSGIGLLSAFSPNYISLVT-LRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN 176 (412)
Q Consensus 99 ~~~i~~~~~~~~~~~~~~~~-~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 176 (412)
+.+++.++++++++++.+++ .|++.|++.+.. +....++.++++ ++|+++.++.+.+..+|..++|++++.+.+.+|
T Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g 171 (455)
T TIGR00892 93 LASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG 171 (455)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC
Confidence 99999999999999988865 579999999876 666677788885 899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCccc
Q 015136 177 WRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLT 256 (412)
Q Consensus 177 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (412)
||+.|++.+++.++..+..++..+.+... ++.+.++ + +.. .+ +...+.. .. +
T Consensus 172 wr~~f~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~-~---------~~~-~~----------~~~~~~~--~~----~ 223 (455)
T TIGR00892 172 WRGSFLILGGLLLHCCVCGALMRPVGPSQ-RVSKSKS-K---------EGL-PP----------DGSTKKL--SK----K 223 (455)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCccc-ccccccc-c---------ccC-CC----------CCccccc--cc----c
Confidence 99999999887766544444443322100 0000000 0 000 00 0000000 00 0
Q ss_pred chhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHH
Q 015136 257 SSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFL 336 (412)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (412)
. ..+...+..++ ++++++.. +......+.....++....+.+.|.++ .|+++.+.+....+
T Consensus 224 -~---~~~~~~~~~~~-~~~~~~~~---~~~~~~~~l~~~~~~~~~~~l~~~~~~-----------~g~s~~~~g~~~~~ 284 (455)
T TIGR00892 224 -S---TAEKINRFLDF-SLFTHRGF---LVYLSGNVIMFLGFFAPIIFLVPYAKD-----------KGVDEYEAAFLLSI 284 (455)
T ss_pred -c---hhhhhhhhcch-HHhcCchH---HHHHHHHHHHHHHccchHHHHHHHHHH-----------cCCCHHHHHHHHHH
Confidence 0 00000000112 23333322 222233333444555556666666532 36888899999999
Q ss_pred HHcchhhHHHHHHHHHHhh--chhhHHHH--HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 337 ASLGELPGLVLAGIIVDRA--GRKLSLTI--MLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 337 ~~~~~~~g~~~~g~l~dr~--grr~~l~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
.+++.+++++++|++.||. ++|+...+ +.++.+++.+......+.+.+.+..++.+++.+...+...+...|.+|+
T Consensus 285 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~ 364 (455)
T TIGR00892 285 IGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGA 364 (455)
T ss_pred HHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhH
Confidence 9999999999999999983 33333332 3333344444444455556666667778887777778888887777663
No 52
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=1.7e-27 Score=219.96 Aligned_cols=317 Identities=13% Similarity=0.044 Sum_probs=231.8
Q ss_pred HHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 015136 27 FAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLL 106 (412)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 106 (412)
+.+++..++..++.....++..|.+++++|+|+.+.|++.+.+.+++.+++++.|++.||+|||++++.+.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 44566777788888888899999999999999999999999999999999999999999999999999999999999887
Q ss_pred hhc---chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc--------
Q 015136 107 SAF---SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMIT-------- 174 (412)
Q Consensus 107 ~~~---~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-------- 174 (412)
... .++++.+++.|++.|+|.|.. +...+++.+..|+++|++.+++.+...++|..++|.++..+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 543 468999999999999999998 88888999999999999999999999999999999999887532
Q ss_pred ------------------CChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCcccc
Q 015136 175 ------------------LNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVS 236 (412)
Q Consensus 175 ------------------~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (412)
.+||++|++.+++.++..+...+.+. |+. ++++++ +.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~-p~~---~~~~~~-~~-------------------- 219 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKM-PAL---NHSDAK-QI-------------------- 219 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCC---Cccccc-cc--------------------
Confidence 36999999888766655444333221 110 000000 00
Q ss_pred ccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc
Q 015136 237 DATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCG 316 (412)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (412)
+ ...+.+++++++..+...+ ..++......+...+.+.|..+.+
T Consensus 220 -------------~-----------------~~~~~~~~~~~~~~~~~~l---~~f~yvg~e~~~~s~l~~y~~~~~--- 263 (410)
T TIGR00885 220 -------------S-----------------FSASLSRLARIRHYREGVI---AQFFYVGVQIMCWTFIIQYAVRLI--- 263 (410)
T ss_pred -------------c-----------------chhhHHHHHhChhHHHHHH---HHHHHHHHHHHHHHHHHHHHhhcc---
Confidence 0 0001222333333333222 223333333444456666653321
Q ss_pred cccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh
Q 015136 317 TTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAF 396 (412)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 396 (412)
.+.+.............+..+|+++++++.||+++|+.+.+...+..++.++..+.++.. ....+.+.+++.+
T Consensus 264 ------~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~-~~~~l~~~glf~s 336 (410)
T TIGR00885 264 ------PGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHV-GLYCLTLCSAFMS 336 (410)
T ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHH
Confidence 123333334455555677889999999999999999999888888888887777755543 3566777788888
Q ss_pred hHhHHHHhhccCCCC
Q 015136 397 GAFTIACIFTPEQLG 411 (412)
Q Consensus 397 ~~~~~~~~~~~e~~P 411 (412)
..+|..++...+..+
T Consensus 337 ~~fp~i~sl~~~~~g 351 (410)
T TIGR00885 337 LMFPTIYGIALKGLG 351 (410)
T ss_pred HHHHHHHHHHHhhhh
Confidence 889998888777654
No 53
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=1.1e-27 Score=220.36 Aligned_cols=310 Identities=17% Similarity=0.123 Sum_probs=217.6
Q ss_pred HHHHHHhhHHHhhhhhhhh-hhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHH-HHHHHHHHHHHhhc
Q 015136 32 LAVFAEAMEIMILSFIGPA-VKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLG-IAMITSGIGLLSAF 109 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~-~~~~~~i~~~~~~~ 109 (412)
+.++..........+..|. +.+++|.|+++.|++.+.+.++..+.+++.|+++||+||||.++. +..+.+++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 3455666666777777775 578899999999999999999999999999999999999887654 55666677778888
Q ss_pred chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhH--HHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 015136 110 SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMW--MVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSI 186 (412)
Q Consensus 110 ~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~ 186 (412)
+++++.+++.|++.|.+.+.. +...++..|+.|+++|+++ .+....+.++|..++|.+++.+.+..+||+.|++.++
T Consensus 84 ~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~ 163 (375)
T TIGR00899 84 NRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAAL 163 (375)
T ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHH
Confidence 999999999999988877766 7777788888887777755 5788888899999999999999999999999999988
Q ss_pred HHHHHHHH-HHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhh
Q 015136 187 PSFAVLLL-YSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKL 265 (412)
Q Consensus 187 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (412)
+.++..+. ++++||.|+...++++. .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~------------------ 190 (375)
T TIGR00899 164 AFVLCGVLVWLFLPSYPRGAPGALTR-----------------------------------L------------------ 190 (375)
T ss_pred HHHHHHHHHHHhCCCcccCcccccCc-----------------------------------c------------------
Confidence 76665444 45577765311000000 0
Q ss_pred cccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHH
Q 015136 266 KSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGL 345 (412)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 345 (412)
+.++.++++..+.......... ........+.|.+.. ++.|.++.+.+..........+++.
T Consensus 191 -----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----------~~~g~~~~~~g~~~~~~~~~~~~~~ 252 (375)
T TIGR00899 191 -----EVRGLLASRDTRLLFVACTLMW---GCNILYIINMPLLII----------HELGLPDKLAGLMMGTAAGLEIPFM 252 (375)
T ss_pred -----hhhhhhcCcchHHHHHHHHHHH---HHHHHHHhhhHHHHH----------HHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 0011112222222222211111 111222233343332 2246777788877777777778889
Q ss_pred HHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 346 VLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 346 ~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
+++|++.||+|||+.+..+.++..+..+.+...++.+.......+.+++.+...+....+..|..|+
T Consensus 253 ~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~ 319 (375)
T TIGR00899 253 LLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG 319 (375)
T ss_pred HhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 9999999999999998887776666555555555555555556666777777778888888887764
No 54
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.96 E-value=2.8e-27 Score=218.00 Aligned_cols=314 Identities=15% Similarity=0.055 Sum_probs=218.4
Q ss_pred HHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhc
Q 015136 30 AGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAF 109 (412)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 109 (412)
++++.++..++........+.+.++++.+..+.+++.+.+.+++.+.+++.|+++||+|||++++++.++.+++.+.+.+
T Consensus 8 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~ 87 (393)
T PRK11195 8 IMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLF 87 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHH
Confidence 34556666665555666667778999999999999999999999999999999999999999999999999998887776
Q ss_pred chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 015136 110 SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPS 188 (412)
Q Consensus 110 ~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~ 188 (412)
..+. ++.|+++|++.+.. |...+++.|++|+++|+++.++.+....+|.++||.+++.+.+. .|+..+.+.+...
T Consensus 88 ~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~ 163 (393)
T PRK11195 88 GIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIY 163 (393)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 6654 77899999999998 99999999999999999999999999999999999999999885 4887777766555
Q ss_pred HHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhccc
Q 015136 189 FAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSG 268 (412)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (412)
++..+..+.+||+|....+ ++++..+..++..
T Consensus 164 ~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~---------------------------------------------- 195 (393)
T PRK11195 164 LLAALFNLFIPRLGARRPG--QSWNPIALLRDFF---------------------------------------------- 195 (393)
T ss_pred HHHHHHHhcCCCCcccccc--cCCCHHHHHHHHH----------------------------------------------
Confidence 5445555667776532110 0000000000000
Q ss_pred ccchhhccchhhHHHHHHH-HHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHH
Q 015136 269 FSSFLLLFSSRLVRTTLLL-WMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVL 347 (412)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 347 (412)
...+.+++++..+..... .+.+.......+....+.+.. .|.++.+.+......+++.+++++.
T Consensus 196 -~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------lg~s~~~~G~~~~~~~~g~i~g~~~ 260 (393)
T PRK11195 196 -HACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVA--------------LGITLNQPAYLQAVVAIGIAVGAGA 260 (393)
T ss_pred -HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------cCCChhHHHHHHHHHHHHHHHHHHH
Confidence 012233333333322222 222222222223333333332 3688889999999999999999999
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 348 AGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 348 ~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
.+++.||.++++.+..+.. .++..+.+.+.++.+......++.|++.+...+...+...|.-|
T Consensus 261 ~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~ 323 (393)
T PRK11195 261 AARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGH 323 (393)
T ss_pred HHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCc
Confidence 9999999998887777653 34444444444444445555656676666655555555555443
No 55
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.96 E-value=1.1e-27 Score=220.52 Aligned_cols=307 Identities=14% Similarity=0.171 Sum_probs=218.2
Q ss_pred hHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 015136 39 MEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVT 118 (412)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 118 (412)
+....+.+..|.+.+++|+|+++.+++.+++.++..++.++.|+++||+|||+.+..+.++.+++..++.++++++.+++
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIY 84 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 34456678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH-HHHH
Q 015136 119 LRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVL-LLYS 196 (412)
Q Consensus 119 ~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~-~~~~ 196 (412)
.|++.|++.+.. +...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++.. ...+
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999887 78889999999999999999999999999999999999999998999999998887766654 3445
Q ss_pred hccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhcc
Q 015136 197 LAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLF 276 (412)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 276 (412)
+.||+++... +++ .+.++ ..+++++.+
T Consensus 165 ~~~~~~~~~~-~~~-~~~~~---------------------------------------------------~~~~~~~~~ 191 (377)
T PRK11102 165 FIPETLPKER-RQP-FHLRT---------------------------------------------------TIRNFASLF 191 (377)
T ss_pred hCCccCcccc-cCC-CChHH---------------------------------------------------HHHHHHHHH
Confidence 5666532100 000 00000 000223333
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhc
Q 015136 277 SSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAG 356 (412)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g 356 (412)
+++...... ...+......+....+.|.+.. +..|.++.+.+.......++.++++++.|++.||+|
T Consensus 192 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----------~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g 258 (377)
T PRK11102 192 RHKRVLGYM---LASGFSFAGMFSFLTAGPFVYI----------ELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVG 258 (377)
T ss_pred cChHHHHHH---HHHHHHHHHHHHHHHcCHHHHH----------HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 333222222 1222222223333333343332 224688888999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHh---hh-hhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 357 RKLSLTIMLILVFICILPLAM---LQ-SNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 357 rr~~l~~~~~~~~~~~~~l~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
||+.+..+..+..+..+.+.. .+ +.+...+...+...+.+...+....+..|..|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (377)
T PRK11102 259 ALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP 317 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc
Confidence 999988887765444333322 12 22222222323333333334444455566555
No 56
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.96 E-value=1.4e-27 Score=222.55 Aligned_cols=312 Identities=19% Similarity=0.119 Sum_probs=230.4
Q ss_pred HHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhh-----
Q 015136 34 VFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSA----- 108 (412)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~----- 108 (412)
.+...+......+..|.+.++++.++.+.|++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+...
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~ 105 (417)
T PRK10489 26 RFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL 105 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc
Confidence 444555666777888999999999999999999999999999999999999999999999988887777665443
Q ss_pred cchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 015136 109 FSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIP 187 (412)
Q Consensus 109 ~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~ 187 (412)
..++++.+++.|++.|++.+.. +...+++.|+.|+++|+++.++.....++|..+||.+++.+.+..+|++.|++.++.
T Consensus 106 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~ 185 (417)
T PRK10489 106 PEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAG 185 (417)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 2567888999999999998877 777889999999999999999999999999999999999999988999999988777
Q ss_pred HHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcc
Q 015136 188 SFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKS 267 (412)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (412)
.++..+..+.+|++++.. +++.++.++
T Consensus 186 ~~~~~~~~~~l~~~~~~~--~~~~~~~~~--------------------------------------------------- 212 (417)
T PRK10489 186 TFITLLPLLRLPALPPPP--QPREHPLRS--------------------------------------------------- 212 (417)
T ss_pred HHHHHHHHHhCCCCCCCC--cccccchHH---------------------------------------------------
Confidence 666666666666653210 000000000
Q ss_pred cccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHH
Q 015136 268 GFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVL 347 (412)
Q Consensus 268 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 347 (412)
....++..++++..+.......... ...+...+.|.+.++. .|.++...++......++.+++.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~----------~g~~~~~~g~~~~~~~~g~~ig~~~ 278 (417)
T PRK10489 213 LLAGFRFLLASPVVGGIALLGGLLT----MASAVRVLYPALADEV----------WQMGAAQIGLLYAAVPLGAALGALT 278 (417)
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHH----HHHhHHHhhHHHHHhc----------cCCChhHhHHHHHHHHHHHHHHHHH
Confidence 0002223333333333222222111 1233445566665332 4688888899999999999999999
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 348 AGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 348 ~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
.+++.||.++++.+..+.++.+++.+.+.+.++.+...+..++.+++.+...+...+++.|..|+
T Consensus 279 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 343 (417)
T PRK10489 279 SGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPD 343 (417)
T ss_pred HHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCH
Confidence 99999998888888888887777777776666655555666667776666667777888888773
No 57
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.96 E-value=6.3e-27 Score=216.50 Aligned_cols=282 Identities=13% Similarity=0.107 Sum_probs=210.9
Q ss_pred HHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcch
Q 015136 32 LAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSP 111 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 111 (412)
...+....+.....+..|.+.+++|.|.++.++..+.+.++..+++++.|+++||+|||+.++.+.++.+++..++..++
T Consensus 10 ~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~ 89 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAE 89 (392)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhC
Confidence 33445555566667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015136 112 NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFA 190 (412)
Q Consensus 112 ~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~ 190 (412)
+++.+++.|++.|++.+.. +...+++.|.+|+++|+++.++.+....+|..++|.+++.+.+..+||+.|++.++..++
T Consensus 90 ~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i 169 (392)
T PRK10473 90 TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGIL 169 (392)
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHH
Confidence 9999999999999999887 778899999999999999999999999999999999999988889999999998877665
Q ss_pred HHH-HHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccc
Q 015136 191 VLL-LYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGF 269 (412)
Q Consensus 191 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (412)
..+ ..+.+||+++.. +++..+..+
T Consensus 170 ~~~~~~~~~~~~~~~~--~~~~~~~~~----------------------------------------------------- 194 (392)
T PRK10473 170 VLLLSLFILKETRPAR--APAASSKPR----------------------------------------------------- 194 (392)
T ss_pred HHHHHHHHcCCCCCcc--cCCccchHH-----------------------------------------------------
Confidence 543 455566653210 000000000
Q ss_pred cchhhccch-hhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHH
Q 015136 270 SSFLLLFSS-RLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLA 348 (412)
Q Consensus 270 ~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 348 (412)
..++.+++ +.+........... .......+.|.+.. ++.|.++.+.+......+++.++++++.
T Consensus 195 -~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 259 (392)
T PRK10473 195 -ENSESLLNRFFLSRLVITTLSVT----VILTFVNTSPVLLM----------EQMGFSRGEYAIIMALTAGVSMTVSFST 259 (392)
T ss_pred -HHHHHHhCHHHHHHHHHHHHHHH----HHHHHHHhCHHHHH----------HHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111222 22222222211111 11112222333321 2246777788888888999999999999
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHH
Q 015136 349 GIIVDRAGRKLSLTIMLILVFICILPLAMLQSNIL 383 (412)
Q Consensus 349 g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~ 383 (412)
+++.||+|||+.+..+..+..++.+.+.+......
T Consensus 260 ~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (392)
T PRK10473 260 PFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAV 294 (392)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888877777766544443
No 58
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.96 E-value=5.3e-27 Score=217.12 Aligned_cols=319 Identities=14% Similarity=0.079 Sum_probs=222.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHH
Q 015136 23 QYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSG 102 (412)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i 102 (412)
.++.+.+.........+......+..|.+.+++|.|+.+.+++.+.+.+++.+++++.|+++||+|||+++..+.++..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 34444444455556566677778889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHH
Q 015136 103 IGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLL 181 (412)
Q Consensus 103 ~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~ 181 (412)
+.+++.++++++.+++.|++.|++.+.. +....+..|.+++++|+++.++.+.+..+|..++|.+++.+.+..|||+.|
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f 165 (394)
T PRK11652 86 GTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACY 165 (394)
T ss_pred HHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHH
Confidence 9999999999999999999999998876 666677889999999999999999999999999999999999989999999
Q ss_pred HHHHHHHHHH-HHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhh
Q 015136 182 ALSSIPSFAV-LLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRI 260 (412)
Q Consensus 182 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (412)
++.++..++. .+..++.||+++.. +++++.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------------------------------------------- 197 (394)
T PRK11652 166 LFLLLLGAGVTFSMARWMPETRPAD---ARRTRVL--------------------------------------------- 197 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCccCccc---cchhHHH---------------------------------------------
Confidence 9987766554 33455667754311 0000000
Q ss_pred hhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcc
Q 015136 261 RITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLG 340 (412)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (412)
..++..++++..+.........+.. ........+.+.++ ..|.++.+.++......++
T Consensus 198 ---------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----------~~g~~~~~~~~~~~~~~~~ 255 (394)
T PRK11652 198 ---------ASYRTLLSNRRFNCYLLMLIGTLAG---IAVFEACSGVLMGA----------VLGLSSMTVSILFILPIPA 255 (394)
T ss_pred ---------HHHHHHHcChHHHHHHHHHHHHHHH---HHHHHHhChHHHHH----------HcCCCHHHHHHHHHHHHHH
Confidence 0223333333333333222222211 11111222222221 2467777888888788888
Q ss_pred hhhHHHHHHHHHHhhchhhHHHHHHH-HHHHHHHHHHh--hhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 341 ELPGLVLAGIIVDRAGRKLSLTIMLI-LVFICILPLAM--LQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 341 ~~~g~~~~g~l~dr~grr~~l~~~~~-~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
.+++..+.+++.||.+++........ ...+....... ..+.+......++.+++.+..+|...++..|.+|
T Consensus 256 ~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 329 (394)
T PRK11652 256 AFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP 329 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 88888899999999884433322222 22222222211 1233444555666777777778888888777766
No 59
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.96 E-value=4e-27 Score=218.08 Aligned_cols=313 Identities=20% Similarity=0.252 Sum_probs=220.4
Q ss_pred HHHhhHHHhhhhhhhhhhhhcC--CCcchhHHHHHH-----HHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHh
Q 015136 35 FAEAMEIMILSFIGPAVKSEWG--VSPSAESLLSTV-----VFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLS 107 (412)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~--~s~~~~~~~~s~-----~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 107 (412)
+.+++++..++...+.+.+++. .++++.+...+. ..++..+++++.|+++||+|||++++.+.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4567788888888888887764 445666655443 333445789999999999999999999999999999999
Q ss_pred hcchhHH--------HHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHH------
Q 015136 108 AFSPNYI--------SLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVM------ 172 (412)
Q Consensus 108 ~~~~~~~--------~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~------ 172 (412)
+++++++ .+++.|+++|++.+.. +....++.|++|+++|++..++...+..+|..+++.++..+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~ 162 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD 162 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9988875 4788999999999987 888899999999999999999999999999999998877654
Q ss_pred --hcCChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCC
Q 015136 173 --ITLNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPD 250 (412)
Q Consensus 173 --~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (412)
+..+||+.|.+.+++.++........+|++++..++++.+ +
T Consensus 163 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~---------------------- 205 (394)
T TIGR00883 163 ALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKHK---------------K---------------------- 205 (394)
T ss_pred HhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhccc---------------c----------------------
Confidence 3578999998877766655555555666543211000000 0
Q ss_pred CCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcch
Q 015136 251 NTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSL 330 (412)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (412)
...+.++.++++. +..+......+.....++....+.|.+.++ +.|.++.+.
T Consensus 206 -----------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~g~~~~~~ 257 (394)
T TIGR00883 206 -----------------KRGPIRETLTKHR-KPFLLGLGLVIATTTTFYLITTYLPTYLTQ----------TLGLSANSA 257 (394)
T ss_pred -----------------ccCCHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------hcCCChhHH
Confidence 0002222222221 223333444444455556666667766532 246778888
Q ss_pred HHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHH-HHHH-h--hhhhHHHHHHHHHHHHHHhhHhHHHHhhc
Q 015136 331 YLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICI-LPLA-M--LQSNILITGLLVGARMFAFGAFTIACIFT 406 (412)
Q Consensus 331 ~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~-~~l~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (412)
+.......+...++.++.|+++||+|||+.+.....+..+.. ..+. . ..+.+.......+.+++.+...+...++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 337 (394)
T TIGR00883 258 LLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFL 337 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 888888899999999999999999999988775554443332 2222 2 23334444555666777777888889999
Q ss_pred cCCCCC
Q 015136 407 PEQLGW 412 (412)
Q Consensus 407 ~e~~P~ 412 (412)
+|.+|+
T Consensus 338 ~~~~p~ 343 (394)
T TIGR00883 338 PELFPT 343 (394)
T ss_pred HHhCCc
Confidence 999884
No 60
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=4.7e-27 Score=216.29 Aligned_cols=307 Identities=16% Similarity=0.175 Sum_probs=216.9
Q ss_pred HHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 015136 27 FAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLL 106 (412)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 106 (412)
+..+.++.+.........++..|.+.+++|.|.++.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++..+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~ 87 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAG 87 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455667777888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 015136 107 SAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSS 185 (412)
Q Consensus 107 ~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~ 185 (412)
+++++|++.+++.|+++|++.+.. +.....+.+..++++|+++++.+..+.++|..+|+.+++.+.+...|+..+.. +
T Consensus 88 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~-~ 166 (381)
T PRK03633 88 LGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVT-G 166 (381)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHH-H
Confidence 999999999999999999999887 77667777888999999999999999999999999999998775433333322 2
Q ss_pred HHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhh
Q 015136 186 IPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKL 265 (412)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (412)
........ .++.+.+++ +++++ + .
T Consensus 167 ~~~~~~~~-~~~~~~~~~----~~~~~-----------------------------------~-~--------------- 190 (381)
T PRK03633 167 LVLAAILP-LLFTRILNQ----QAENH-----------------------------------D-S--------------- 190 (381)
T ss_pred HHHHHHHH-HHHhcccCC----CCCCC-----------------------------------C-C---------------
Confidence 21111111 112111110 00000 0 0
Q ss_pred cccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHH
Q 015136 266 KSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGL 345 (412)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 345 (412)
.+.++.++++..+......+. ....+.....+.|.|.++ .|.++...+.......++.++++
T Consensus 191 ----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~lp~~~~~-----------~g~s~~~~g~~~~~~~~~~~~~~ 252 (381)
T PRK03633 191 ----TSIWPMLKLRQARLGVNGCII---SGIVLGSLYGLMPLYLNH-----------QGMSDASIGFWMALLVSAGILGQ 252 (381)
T ss_pred ----CCHHHHHHhcchHHHHHHHHH---HHHHHHHHHHHHHHHHHH-----------cCCCHHHHHHHHHHHHHHHHHHH
Confidence 011222222222221111111 112222333445655532 35777788888888889999999
Q ss_pred HHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 346 VLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 346 ~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
+..|++.||+++|+.+..+..+..++.+.+. .. ........+.+.+.....|...+.+.|..|
T Consensus 253 ~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~ 315 (381)
T PRK03633 253 WPIGRLADRFGRLLVLRVQVFVVILGSIAML--SQ-AAMAPALFILGAAGFTLYPVAMAWACEKVE 315 (381)
T ss_pred hhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--hh-HHHHHHHHHHHHHHHhHHHHHHHHHHccCC
Confidence 9999999999999998888777777665443 11 222233444555555667888888878765
No 61
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.96 E-value=4.9e-30 Score=225.11 Aligned_cols=182 Identities=25% Similarity=0.290 Sum_probs=169.8
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
.+..++.+.++++...++..+++.+....+.+++.||++++..|++.+.+.+++.+.+|+.|+++||+.||+++.+|..+
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~i 107 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFI 107 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHH
Confidence 45567788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-h
Q 015136 100 TSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN-W 177 (412)
Q Consensus 100 ~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w 177 (412)
+.++.+.++++..+|++.++|.+.|+|.+.. ++.+++++|.+|.++|++++++++.+.++|..+|.+.+..+.+..+ |
T Consensus 108 W~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~W 187 (493)
T KOG1330|consen 108 WTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWW 187 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccce
Confidence 9999999999999999999999999999998 9999999999999999999999999999999999999999888666 9
Q ss_pred HHHHHHHHHHHHHHHHHH-HhccCC
Q 015136 178 RWLLALSSIPSFAVLLLY-SLAPES 201 (412)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~-~~~~~~ 201 (412)
||.|...++++++..++. ++.+|+
T Consensus 188 r~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 188 RWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred EEEEEeehHHHHHHHHHHHhhccCc
Confidence 999999999998886654 445544
No 62
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.96 E-value=1.7e-27 Score=223.11 Aligned_cols=287 Identities=16% Similarity=0.195 Sum_probs=203.2
Q ss_pred cHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHH
Q 015136 22 FQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITS 101 (412)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 101 (412)
.++..+....+.+...+.++..+....|.+.+ +|+|+++.+++.+++.++..+++++.|+++||+|||+.+..+.++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~ 102 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHH
Confidence 35666677777777777777777778888876 59999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcc----hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHH-hcC
Q 015136 102 GIGLLSAFS----PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVM-ITL 175 (412)
Q Consensus 102 i~~~~~~~~----~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-~~~ 175 (412)
++.++.... ++++.+.+.|++.|++.+.. +.....+.|++|+++|++++++.+.+.++|..+++.+.+... ++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 182 (438)
T TIGR00712 103 AVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN 182 (438)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhh
Confidence 988877654 46777888999999999987 777788889999999999999999999999999988877544 457
Q ss_pred ChHHHHHHHHHHHHHH-HHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCc
Q 015136 176 NWRWLLALSSIPSFAV-LLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPL 254 (412)
Q Consensus 176 ~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (412)
+||+.|++.+++.++. ++.++++||+|+....+ +.++.+ ++. .++.. ++ .+.+
T Consensus 183 ~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~~-----------~~~~~---~~--~~~~ 236 (438)
T TIGR00712 183 DWHAALYFPAICAIIVALFAFAMMRDTPQSCGLP-PIEEYR---------NDY-----------PDDYN---EK--AEQE 236 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCC-Cchhcc---------ccc-----------ccccc---cc--cccc
Confidence 9999999988877665 44566677765421100 000000 000 00000 00 0000
Q ss_pred ccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHH
Q 015136 255 LTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSV 334 (412)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (412)
.+. ++. ..+.+++++..+ ......++.....++...+.|.|.++. .|.++.+.++..
T Consensus 237 ~~~--------~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~l~~~----------~g~s~~~~~~~~ 293 (438)
T TIGR00712 237 LTA--------KEI--FMQYVLPNKLLW---YIAIANVFVYLLRYGVLDWSPTYLKEV----------KHFALDKSSWAY 293 (438)
T ss_pred cch--------HHH--HHHHHccCchHH---HHHHHHHHHHHHHHHHHHhHHHHHHHc----------cCCChhhHHHHH
Confidence 000 000 011233333222 222233333445566777788777443 468888889988
Q ss_pred HHHHcchhhHHHHHHHHHHhhchh
Q 015136 335 FLASLGELPGLVLAGIIVDRAGRK 358 (412)
Q Consensus 335 ~~~~~~~~~g~~~~g~l~dr~grr 358 (412)
.+..+.++++++++|+++||++++
T Consensus 294 ~~~~~~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 294 FLYEYAGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC
Confidence 899999999999999999999643
No 63
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.96 E-value=5.7e-27 Score=213.58 Aligned_cols=291 Identities=29% Similarity=0.373 Sum_probs=247.1
Q ss_pred HHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhc
Q 015136 30 AGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAF 109 (412)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 109 (412)
+.+..+....+....++..|.+.+++|.++++.++..+...++..++.++.|+++||+|||+.+..+..+..++.+....
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~ 83 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF 83 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH
Confidence 44566777788888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 015136 110 SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPS 188 (412)
Q Consensus 110 ~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~ 188 (412)
.++++.+++.|++.|++.+.. +...+++.|++|+|+|++.+++.+...++|..+++.+++.+.+..+||+.+++.++..
T Consensus 84 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (352)
T cd06174 84 ASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILG 163 (352)
T ss_pred hccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999999999999998 8888999999999999999999999999999999999999999999999999988777
Q ss_pred HHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhccc
Q 015136 189 FAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSG 268 (412)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (412)
++..+...+.+
T Consensus 164 ~~~~~~~~~~~--------------------------------------------------------------------- 174 (352)
T cd06174 164 LLLALLLLFLL--------------------------------------------------------------------- 174 (352)
T ss_pred HHHHHHHHHHH---------------------------------------------------------------------
Confidence 76655544432
Q ss_pred ccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHH
Q 015136 269 FSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLA 348 (412)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 348 (412)
+..+......+...........+.+.+.++. .|.++.+.+.......++.++++++.
T Consensus 175 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~~~~~ 231 (352)
T cd06174 175 -------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEV----------LGLSAAEAGLLLSLFGLGGILGALLG 231 (352)
T ss_pred -------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112223333333444455555555555332 25788889999999999999999999
Q ss_pred HHHHHhhchhh-HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 349 GIIVDRAGRKL-SLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 349 g~l~dr~grr~-~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
+++.||++||+ .+..+..+..++.+.+...++.+...+..++.+++.+...+...++..|..|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 296 (352)
T cd06174 232 GLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPP 296 (352)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCH
Confidence 99999999999 99999999999988888777777777788888888888899999999998873
No 64
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.96 E-value=1.2e-26 Score=216.04 Aligned_cols=315 Identities=17% Similarity=0.149 Sum_probs=220.8
Q ss_pred HHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcch-----hHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHH
Q 015136 29 YAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSA-----ESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGI 103 (412)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 103 (412)
.++++.++.........+.+|.+.+++|.+..+ .|++.+++.++..+++++.|+++||+|||++++.+.++.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 97 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIV 97 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHH
Confidence 345566667777778888999999999998765 488999999999999999999999999999999999999999
Q ss_pred HHHhhcchhHHHHHHHHHHHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHH
Q 015136 104 GLLSAFSPNYISLVTLRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLAL 183 (412)
Q Consensus 104 ~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~ 183 (412)
.++....++++.+++.|++.|++.+..+....++.|.+|+++|+++.++......+|..++|.+++.+.+..+||+.|++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 177 (408)
T PRK09874 98 MVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFI 177 (408)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 98888899999999999999998654466667888999999999999999999999999999999999998999999999
Q ss_pred HHHHHHHHHH-HHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhh
Q 015136 184 SSIPSFAVLL-LYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRI 262 (412)
Q Consensus 184 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (412)
.++..++..+ ..++.+|+++... +++..+.++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---------------------------------------------- 210 (408)
T PRK09874 178 TASVLFLCFLVTLFCIRENFQPVS-KKEMLHMRE---------------------------------------------- 210 (408)
T ss_pred HHHHHHHHHHHHHHHhccCccccc-chhhhHHHH----------------------------------------------
Confidence 8877666544 3445555432100 000000000
Q ss_pred hhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCC---cchHHHHHHHHc
Q 015136 263 TKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHD---SSLYLSVFLASL 339 (412)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 339 (412)
..+.+.+++..+........ ..........+.+.|..+.. +... ...+......++
T Consensus 211 --------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~g~~~~~~~l 269 (408)
T PRK09874 211 --------VVTSLKNPKLVLSLFVTTLI---IQVATGSIAPILTLYVRELA----------GNVSNIAFISGMIASVPGV 269 (408)
T ss_pred --------HHHhCcCCchHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHh----------ccchHHHHHHHHHHHHHHH
Confidence 00111112222211111111 11111222223333332211 1111 123445556677
Q ss_pred chhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 340 GELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 340 ~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
+.+++.+..|++.||++||+.+..+..+..++.+.+.+.++.+...+..++.+++.+...+...+...+..|
T Consensus 270 ~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 341 (408)
T PRK09874 270 AALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSS 341 (408)
T ss_pred HHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCC
Confidence 888889999999999999999998888877777766665565656666667777777777777666555444
No 65
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.96 E-value=1.5e-26 Score=214.30 Aligned_cols=301 Identities=13% Similarity=0.049 Sum_probs=202.8
Q ss_pred hhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHh---hc-chhHHHHHHH
Q 015136 44 LSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLS---AF-SPNYISLVTL 119 (412)
Q Consensus 44 ~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~-~~~~~~~~~~ 119 (412)
.....+.+.+++|.|+++.++..+.+.+++.+++++.|+++||+|||+++..+..+.+++.+++ +. .++++.+++.
T Consensus 32 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (402)
T TIGR00897 32 EQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLF 111 (402)
T ss_pred HHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHH
Confidence 3345566778999999999999999999999999999999999999999999999998887654 23 3578888999
Q ss_pred HHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHH-HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH-HH
Q 015136 120 RGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGS-IFEAALAWIVMITLNWRWLLALSSIPSFAVLLL-YS 196 (412)
Q Consensus 120 r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~-~~ 196 (412)
|++.|++.+.. +...+.+.+++|+++|++++|+.+.+.++|. .++|.+++.+.+..||+..++.......+..+. .+
T Consensus 112 ~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 191 (402)
T TIGR00897 112 YGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALF 191 (402)
T ss_pred HHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHh
Confidence 99999998776 6667788899999999999999999999997 689999999888889766655443333322222 33
Q ss_pred hccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhcc
Q 015136 197 LAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLF 276 (412)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 276 (412)
+.++.++.. +++++++.+ + ..+.++.++
T Consensus 192 ~~~~~~~~~-~~~~~~~~~-------------------------------------------~--------~~~~~~~~~ 219 (402)
T TIGR00897 192 SNKDIFTPQ-HMQTREKFS-------------------------------------------E--------LGKAATILF 219 (402)
T ss_pred ccCCCCCcc-cccCCcchh-------------------------------------------h--------HHHHHHHHH
Confidence 333321100 000000000 0 000223344
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhc
Q 015136 277 SSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAG 356 (412)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g 356 (412)
+++.. +......++....+++...+.|.|.++ .|.++.+.+.......++.+++++..|+++||++
T Consensus 220 ~~~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~-----------~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~ 285 (402)
T TIGR00897 220 TNPNV---LLGGMVRIINTIGLFGFAVFLPMFVAE-----------LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLG 285 (402)
T ss_pred cChhH---HHHHHHHHHHHHHHHHHHHHHHHHHHH-----------cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 44332 333334444556667777778877633 4688888888888888999999999999999999
Q ss_pred hhhHHH-HHHHHHHHHHHHHHh-----hhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 357 RKLSLT-IMLILVFICILPLAM-----LQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 357 rr~~l~-~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
||+.+. .+.+..+++.+.+.. .++.+...+..++.+++.+...+. .....|..|
T Consensus 286 ~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~ 345 (402)
T TIGR00897 286 WMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP 345 (402)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc
Confidence 887664 333333333333221 123344445566666666555443 344556554
No 66
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=2.3e-26 Score=211.78 Aligned_cols=276 Identities=20% Similarity=0.297 Sum_probs=220.3
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHHhhhcCc
Q 015136 52 KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSP--NYISLVTLRGLVGIGIGS 129 (412)
Q Consensus 52 ~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~r~l~G~~~g~ 129 (412)
..++++|+++.+++.+.+..|+.+++++.|++.||+|-|+++..+.++.++++++...+. +++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 346889999999999999999999999999999999999999999999999999987764 456778999999999999
Q ss_pred c-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHH-HhccCCchhhh
Q 015136 130 G-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMIT-LNWRWLLALSSIPSFAVLLLY-SLAPESPRYLN 206 (412)
Q Consensus 130 ~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 206 (412)
. |....+.++|.|+++|++..++..++..+|.+++.++++++.+. +||++.|++.++.+++..+++ ++..|+|.. .
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~-h 223 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK-H 223 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc-C
Confidence 8 99999999999999999999999999999999999999999998 999999999999999886665 455666652 1
Q ss_pred hcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHH
Q 015136 207 VKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLL 286 (412)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 286 (412)
+.-..+|.+...+ .+..+ . ..+....+++++++.+ .++.
T Consensus 224 ~~is~~El~~I~~----~k~~~-----------------~-----------------~~~~~~vP~~~i~ts~---~vwa 262 (466)
T KOG2532|consen 224 PNISEKELKYIEK----GKSEA-----------------H-----------------VKKKPPVPYKAILTSP---PVWA 262 (466)
T ss_pred CCCCHHHHHHHHh----ccccc-----------------c-----------------cCCCCCCCHHHHHcCH---HHHH
Confidence 1111122111111 00000 0 0000123788888775 4456
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhch---------
Q 015136 287 LWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGR--------- 357 (412)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr--------- 357 (412)
.++..++..+.++.+..+.|.|+++. .|++..+.|+..++..+...+..+++|.++||..+
T Consensus 263 i~~~~f~~~~~~~~l~~y~PtY~~~V----------L~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~r 332 (466)
T KOG2532|consen 263 IWISAFGGNWGFYLLLTYLPTYLKEV----------LGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVR 332 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHH----------hCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHH
Confidence 66777778889999999999998766 58999999999999999999999999999999754
Q ss_pred hhHHHHHHHHHHHHHHHHHhhh
Q 015136 358 KLSLTIMLILVFICILPLAMLQ 379 (412)
Q Consensus 358 r~~l~~~~~~~~~~~~~l~~~~ 379 (412)
|..-.++....+++++.+.+.+
T Consensus 333 kifn~i~~~~~ai~l~~l~~~~ 354 (466)
T KOG2532|consen 333 KIFNTIAFGGPAVFLLVLAFTS 354 (466)
T ss_pred HHHHhHHHHHHHHHHHeeeecC
Confidence 4444566777777777777644
No 67
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.96 E-value=1.5e-26 Score=211.19 Aligned_cols=305 Identities=15% Similarity=0.170 Sum_probs=219.1
Q ss_pred HhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-----cchhHH-HHHHHHHHHHHHHhhcc---hh
Q 015136 42 MILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNY-----GRKKGF-LGIAMITSGIGLLSAFS---PN 112 (412)
Q Consensus 42 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-----Grr~~~-~~~~~~~~i~~~~~~~~---~~ 112 (412)
...++..|.+.+|+|+|.+++|+..+. .+...+ .+++|+++||+ ||||.+ +.+.++.++.....++. .+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456778899999999999999999755 455555 99999999998 899974 56777777776666666 45
Q ss_pred HHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------hHHHHHH
Q 015136 113 YISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN--------WRWLLAL 183 (412)
Q Consensus 113 ~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--------w~~~~~~ 183 (412)
.+.+....++.+.+.+.. +...+++.|++|+|+|+++.++...+..+|.++++.+++.+.+..+ ||..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 666777777888887777 7888999999999999999999999999999999999999988888 9999999
Q ss_pred HHHHHHHHHHHHHh-ccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhh
Q 015136 184 SSIPSFAVLLLYSL-APESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRI 262 (412)
Q Consensus 184 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (412)
.++..++..+..++ .+|+++. +++.++.++.
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~---~~~~~~~~~~--------------------------------------------- 194 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQED---ASVPKPLTQA--------------------------------------------- 194 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCcc---cccchhHHHH---------------------------------------------
Confidence 88877665544443 4553221 0000000000
Q ss_pred hhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHH-cch
Q 015136 263 TKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLAS-LGE 341 (412)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 341 (412)
....++++++++..+..+......+.....++....+.+.|.++ .|.++.+.+......+ +..
T Consensus 195 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~g~~~~~~g~~~~~~~~~~~ 258 (356)
T TIGR00901 195 -----VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-----------MGFSKEEIALVAKINGLLGA 258 (356)
T ss_pred -----HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------cCCCHHHHHHHhHHHHHHHH
Confidence 00023333443332233334444444456666666677766633 3688888887776655 567
Q ss_pred hhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhh-----------hhhHHHHHHHHHHHHHHhhHhHHHHhhccCCC
Q 015136 342 LPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAML-----------QSNILITGLLVGARMFAFGAFTIACIFTPEQL 410 (412)
Q Consensus 342 ~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 410 (412)
+++.+++|++.||+|||+.+..+.++.++...++.+. ++.+......++.+++.+...+...++..|.+
T Consensus 259 ~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 338 (356)
T TIGR00901 259 ILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLS 338 (356)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 8999999999999999999888888877766655442 22344455566667888888999999999998
Q ss_pred CC
Q 015136 411 GW 412 (412)
Q Consensus 411 P~ 412 (412)
|+
T Consensus 339 p~ 340 (356)
T TIGR00901 339 NP 340 (356)
T ss_pred CC
Confidence 85
No 68
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.96 E-value=6.5e-33 Score=261.33 Aligned_cols=345 Identities=30% Similarity=0.468 Sum_probs=241.3
Q ss_pred HHHHHHHhhHHHhhhhhhhhhh--hhcCCCc---------chhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Q 015136 31 GLAVFAEAMEIMILSFIGPAVK--SEWGVSP---------SAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~---------~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
.++.+..+++....+...+... .+++.+. .+.++..+...+|..+|+++.|+++||+|||+.++++.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 3445667777766666555444 2222222 2468899999999999999999999999999999999999
Q ss_pred HHHHHHHhhcch---hHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015136 100 TSGIGLLSAFSP---NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITL 175 (412)
Q Consensus 100 ~~i~~~~~~~~~---~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 175 (412)
..++.++.++++ +++.+.++|++.|++.|.. +....++.|..|+++|++..++.+.+..+|..++..++..+.+..
T Consensus 86 ~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999 9999999999999999998 889999999999999999999999999999999888876664433
Q ss_pred ---ChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCC
Q 015136 176 ---NWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNT 252 (412)
Q Consensus 176 ---~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (412)
+||..+.+..++.++..+..+++||+|+|+..++|.+|+++..++.++.+..+.+.++ +.++.++.++.
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~- 237 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEE-------IKAEKKESQES- 237 (451)
T ss_pred ccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccc-------ccccccccccc-
Confidence 4999999999988877777789999999999999999988887764433111111000 00000000000
Q ss_pred Ccccchhhhhhhhcccccchhhccchhh-HHHHHHHHHHHHHHHHHH-HHHHHhhhcccccccccccccccccCCCCcch
Q 015136 253 PLLTSSRIRITKLKSGFSSFLLLFSSRL-VRTTLLLWMLFFGNSFTY-YGIILMTSKLSSTQSKCGTTLTVSQSMHDSSL 330 (412)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (412)
...++++++.+. +++............+.. +....+.+.+.++ .+.+..
T Consensus 238 ----------------~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-----------~~~~~~-- 288 (451)
T PF00083_consen 238 ----------------KASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-----------AGISNS-- 288 (451)
T ss_pred ----------------ceeeeeccccccccccccccccccccccccccccccccccccccc-----------cccccc--
Confidence 025555665432 334444444333333333 3333444444422 234443
Q ss_pred HHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHH--h---hhh----hHHHHHHHHHH-HHHHhhHhH
Q 015136 331 YLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLA--M---LQS----NILITGLLVGA-RMFAFGAFT 400 (412)
Q Consensus 331 ~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~--~---~~~----~~~~~~~~~~~-~~~~~~~~~ 400 (412)
........+...++.+++.++.||+|||++++.+..+++++.+.+. . ... ......+..+. ..+..+..+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~ 368 (451)
T PF00083_consen 289 FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGP 368 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeeccccccccccc
Confidence 3344455677788888888999999999999999988888877774 1 222 12222222222 233335678
Q ss_pred HHHhhccCCCCC
Q 015136 401 IACIFTPEQLGW 412 (412)
Q Consensus 401 ~~~~~~~e~~P~ 412 (412)
..+.+++|++|+
T Consensus 369 ~~~~~~~ElfPt 380 (451)
T PF00083_consen 369 LPWIYTAELFPT 380 (451)
T ss_pred cccccccccccc
Confidence 888999999996
No 69
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.96 E-value=9.7e-27 Score=212.28 Aligned_cols=293 Identities=17% Similarity=0.193 Sum_probs=213.1
Q ss_pred HHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 015136 41 IMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLR 120 (412)
Q Consensus 41 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r 120 (412)
....++..|.+.+++|+|+++.+++.+++.+++.+++++.|+++||+|||+++.++.++..++.+.+ ..++.+.+++.|
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~ 94 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGT 94 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHH
Confidence 3567889999999999999999999999999999999999999999999999999999888888777 778899999999
Q ss_pred HHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHh
Q 015136 121 GLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITL--NWRWLLALSSIPSFAVLLLYSL 197 (412)
Q Consensus 121 ~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--~w~~~~~~~~~~~~~~~~~~~~ 197 (412)
++.|++.+.. +....++.|++| ++|++++++.+...++|..+++.+.+.+.+.. +||+.|.+.++..++.. ..+
T Consensus 95 ~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~--~~~ 171 (355)
T TIGR00896 95 ALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL--LAW 171 (355)
T ss_pred HHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH--HHH
Confidence 9999999886 666677778775 68999999999999999999999999887764 39999887765443332 223
Q ss_pred ccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccc
Q 015136 198 APESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFS 277 (412)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 277 (412)
+|+.++ +++.+ . + .. . .+.+++++
T Consensus 172 ~~~~~~----~~~~~-------------~----------------~---~~-~-------------------~~~~~~~~ 195 (355)
T TIGR00896 172 IPQVRR----RVAAN-------------Q----------------T---TT-R-------------------LTPVRIWR 195 (355)
T ss_pred hhhhcc----ccCCC-------------C----------------C---CC-C-------------------CCCchhhc
Confidence 343321 00000 0 0 00 0 01122233
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhh-c
Q 015136 278 SRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRA-G 356 (412)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g 356 (412)
++..+ ......+.....++....+.|.+.++ .|.+..+.+...+...++.++++++.|++.||+ +
T Consensus 196 ~~~~~---~~~~~~~~~~~~~~~~~~~lp~~~~~-----------~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~ 261 (355)
T TIGR00896 196 SPLAW---QVTVFFGLQSGLYYSLIGWLPAILIS-----------HGASAATAGSLLALMQLAQAASALLIPALARRVKD 261 (355)
T ss_pred CHhHH---HHHHHHHHHHHHHHHHHHHHHHHHHH-----------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcc
Confidence 32222 22223334445566666777776643 368888899999999999999999999999999 5
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccC
Q 015136 357 RKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPE 408 (412)
Q Consensus 357 rr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 408 (412)
||+.+.++..+.+++.+.+.+..+.... ....+.+++.+..++...+...+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~g~~~g~~~~~~~~~~~~ 312 (355)
T TIGR00896 262 QRGIVAVLAVLQLVGLCGLLFAPMHGLW-AWALVLGLGQGGAFPLALTLIGL 312 (355)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHhhhhHhHHHHHHHHH
Confidence 6667777777777777666654433222 23456677777777776555443
No 70
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=2.2e-26 Score=212.25 Aligned_cols=337 Identities=19% Similarity=0.277 Sum_probs=241.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHhhh-hhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHH
Q 015136 23 QYLVFAYAGLAVFAEAMEIMILS-FIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITS 101 (412)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 101 (412)
.+.++..+++.++....+...++ ..+..+.+|.+....+.+.+.++++++++++.++++.|.||++..+.+....++++
T Consensus 43 dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~ 122 (495)
T KOG2533|consen 43 DLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWG 122 (495)
T ss_pred HHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHH
Confidence 34455555666666666655444 23344668999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHH------hc
Q 015136 102 GIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVM------IT 174 (412)
Q Consensus 102 i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~------~~ 174 (412)
+..++....+|++.+++.|++.|+.++.. |....++..|+.+++|++.++++.+..++|.++|.+++..+. ..
T Consensus 123 ~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~ 202 (495)
T KOG2533|consen 123 LFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGL 202 (495)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCc
Confidence 98888888999999999999999999998 999999999999999999999999999999999999998863 34
Q ss_pred CChHHHHHHHHHHHHHH-HHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCC
Q 015136 175 LNWRWLLALSSIPSFAV-LLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTP 253 (412)
Q Consensus 175 ~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (412)
.||||.|++.+++.++. +++.+++|+.|.... -..++|..-..++.+..+.... +++
T Consensus 203 ~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~-fl~~~ek~~~~~~~~~~~~~~~--------------------~~~- 260 (495)
T KOG2533|consen 203 AGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAW-FLTDEEKELVVERLRESPSGGI--------------------ENK- 260 (495)
T ss_pred CCceeehhHHHHHHHHHHheEEEEecCChhhcc-ccchHHHHHHHHHHHhccCCCc--------------------ccc-
Confidence 68999999999888876 556788999886221 1111111111111110000000 000
Q ss_pred cccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHH
Q 015136 254 LLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLS 333 (412)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (412)
.+++++++.-..+.++..+++.++.....+++..|+|.+.++. .|++..++..+
T Consensus 261 ----------------~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~----------~~~s~~~a~~l 314 (495)
T KOG2533|consen 261 ----------------FKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSN----------GGYSELQANLL 314 (495)
T ss_pred ----------------cCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcC----------CCcChHHhccc
Confidence 1233333333345667788888888899999999999998662 36888999999
Q ss_pred HHHHHcchhhHHHHHHHHHHh----hchhhHHHHHHHHHHHHH-HHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhcc
Q 015136 334 VFLASLGELPGLVLAGIIVDR----AGRKLSLTIMLILVFICI-LPLAMLQSNILITGLLVGARMFAFGAFTIACIFTP 407 (412)
Q Consensus 334 ~~~~~~~~~~g~~~~g~l~dr----~grr~~l~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (412)
.++..++++++.+++|+++|| ..+|........+..+.. +.+..................+.....+.....++
T Consensus 315 s~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s 393 (495)
T KOG2533|consen 315 STPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTS 393 (495)
T ss_pred cchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhcc
Confidence 999999999999999999999 556666555554444433 44444432333333333333333333444444433
No 71
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.95 E-value=4.5e-26 Score=212.52 Aligned_cols=369 Identities=14% Similarity=0.103 Sum_probs=263.2
Q ss_pred CCccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHH
Q 015136 19 FGKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAM 98 (412)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~ 98 (412)
...+-|.+.+..++..+........++.+.+.++++++.+.++++|+.++....+.+.+|+.+.+.||+|.|.+.+.|.+
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 46678888888888888888778888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHH-HHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015136 99 ITSGIGLLSAFSPNYISLVTL-RGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN 176 (412)
Q Consensus 99 ~~~i~~~~~~~~~~~~~~~~~-r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 176 (412)
+.+++.++.++++++|.+++. -++.|+|.|+. ......+. .+++|+|+.+.|+...+.++|..+-|.+...+.+.+|
T Consensus 120 v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G 198 (509)
T KOG2504|consen 120 VAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG 198 (509)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC
Confidence 999999999999999988876 58899999998 44444444 6677999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccC-CchhhhhcCChHHHHHHHHHHHHhhCCCCCCCcccccc-CCCCCcccCCCCCCCc
Q 015136 177 WRWLLALSSIPSFAVLLLYSLAPE-SPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDA-TSRPDEELAPPDNTPL 254 (412)
Q Consensus 177 w~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 254 (412)
||+.+++.+.+.+-.++.....++ +++.. +..++..+. .....+.......... +++.............
T Consensus 199 ~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (509)
T KOG2504|consen 199 WRGALLIFGGISLNVLVAGALLRPLSPPKK---PNEEKDLRN-----SAASVESTPKPVELRISERDSGLKKLSLSNLAT 270 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCcCCC---chhhhhhcc-----ccccccccccccccccccCCCCCCcccccchhh
Confidence 999999998877655555444433 33211 111110000 0000000000000000 0000000000000000
Q ss_pred ccchhhhhhh--hcccccc--hhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcch
Q 015136 255 LTSSRIRITK--LKSGFSS--FLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSL 330 (412)
Q Consensus 255 ~~~~~~~~~~--~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (412)
.+.. .++.+ ..+.... -.++++. +.++...+...+..+.++....+++.+.++ .+++..++
T Consensus 271 ~~~~-~~~~~~~~~~~~~~~~d~~ll~~---~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-----------~g~~~~~a 335 (509)
T KOG2504|consen 271 LKRG-PDKWRNSPLQAFLSMLDLSLLKD---PKFLLLALSNLFAYLGFNVPFVYLPSYAKS-----------LGLSSNDA 335 (509)
T ss_pred hhhC-CccccccchhhhhhhhhHHHHcC---chHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------cCCChhhh
Confidence 0000 00000 0000001 0233333 344555556666777888888888888753 46999999
Q ss_pred HHHHHHHHcchhhHHHHHHHHHHhhc--hhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccC
Q 015136 331 YLSVFLASLGELPGLVLAGIIVDRAG--RKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPE 408 (412)
Q Consensus 331 ~~~~~~~~~~~~~g~~~~g~l~dr~g--rr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 408 (412)
+...++.++.+++++++.|++.|+.. ++.+..++.+..+++.+...+.++.+.+.....+.|++.+.........+.|
T Consensus 336 a~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~ 415 (509)
T KOG2504|consen 336 AFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVD 415 (509)
T ss_pred HHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999977 5666677778888888777788888888888999999888888777777666
Q ss_pred CCC
Q 015136 409 QLG 411 (412)
Q Consensus 409 ~~P 411 (412)
+.+
T Consensus 416 ~~g 418 (509)
T KOG2504|consen 416 LVG 418 (509)
T ss_pred HcC
Confidence 553
No 72
>PRK10054 putative transporter; Provisional
Probab=99.95 E-value=1.1e-25 Score=207.62 Aligned_cols=311 Identities=12% Similarity=0.022 Sum_probs=215.9
Q ss_pred HHHHHhhHHHhhhhhh-hhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcch
Q 015136 33 AVFAEAMEIMILSFIG-PAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSP 111 (412)
Q Consensus 33 ~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 111 (412)
..++.....+...+.. +.+.+++|+|.+++|++.+.+.+++.+++++.|+++||+|||++++++.++.+++.++..+++
T Consensus 15 ~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~ 94 (395)
T PRK10054 15 SSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVN 94 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHh
Confidence 3444455555555544 456678999999999999999999999999999999999999999999999999998889999
Q ss_pred hHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015136 112 NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFA 190 (412)
Q Consensus 112 ~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~ 190 (412)
+++.+++.|.+.|.+.+.. +...++..|..|+++|+++.++.....++|.+++|.+++.+.+ .+|+..|++.++..++
T Consensus 95 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i 173 (395)
T PRK10054 95 NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAF 173 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHH
Confidence 9999998998888877766 7778889999999999999999999999999999999998875 7999999988877666
Q ss_pred HHH-HHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccc
Q 015136 191 VLL-LYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGF 269 (412)
Q Consensus 191 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (412)
..+ ..+++||+++. +++++ ++.
T Consensus 174 ~~i~~~~~~~~~~~~----~~~~~-~~~---------------------------------------------------- 196 (395)
T PRK10054 174 PLVFIQIWVQRSEKA----IATET-GSV---------------------------------------------------- 196 (395)
T ss_pred HHHHHHHHHhccccc----cccch-hhh----------------------------------------------------
Confidence 543 34445554320 00000 000
Q ss_pred cchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHH
Q 015136 270 SSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAG 349 (412)
Q Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g 349 (412)
.+.++.++++..+..... .++..+.+.....+.+.+.... ++.+.+....+.......+..+..+...|
T Consensus 197 ~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 265 (395)
T PRK10054 197 WSPSVLLQDKALLWFTCS---GFLASFVSGAFASCISQYVMVV--------ADSDFAEKVVAVVLPVNAAMVVSLQYSVG 265 (395)
T ss_pred hhhhhhccCceehHHHHH---HHHHHHHHHHhhhhHHHHHHHh--------cccchHHHHHHHHHHhhhhheeeehhHHH
Confidence 011122222222222221 1111111111111222222100 12245555667777777777778888999
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 350 IIVDRAGRKLSLTIMLILVFICILPLAML-QSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 350 ~l~dr~grr~~l~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
++.||.++|+.+..+..+.+++.+.+.+. ++.+...+...+.+++.....|....++.+..|+
T Consensus 266 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~ 329 (395)
T PRK10054 266 RRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPP 329 (395)
T ss_pred HHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCc
Confidence 99999999999988888888877766653 3444444556666777666667777777666663
No 73
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.95 E-value=4.3e-25 Score=204.03 Aligned_cols=296 Identities=13% Similarity=0.061 Sum_probs=209.8
Q ss_pred hhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 015136 44 LSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLV 123 (412)
Q Consensus 44 ~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~ 123 (412)
++...+.+.+++|.|+.++|++.+...++..+.+++.|+++||+|||++++.+.++.+++.+.+...++++.+++.|++.
T Consensus 30 ~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 109 (400)
T PRK11646 30 FPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILS 109 (400)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 33444567889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-HHHhccCC
Q 015136 124 GIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLL-LYSLAPES 201 (412)
Q Consensus 124 G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~ 201 (412)
|++.+.. +...+++.|++|+++|++++++.....++|..+||.+++.+. ..+||+.|++.++..++..+ ..++.||.
T Consensus 110 g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 110 GLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 9998877 777888999999999999999999999999999999999998 67999999988776665533 33444442
Q ss_pred chhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhH
Q 015136 202 PRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLV 281 (412)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 281 (412)
+. ++..++.+ .+++++++++..
T Consensus 189 ~~----~~~~~~~~------------------------------------------------------~~~~~~~~~~~~ 210 (400)
T PRK11646 189 KL----STVRTPVR------------------------------------------------------EGMTRVLRDKRF 210 (400)
T ss_pred cc----cccchhhH------------------------------------------------------HHHHHHHcCchH
Confidence 10 00000000 022223333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHH-hhchhhH
Q 015136 282 RTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVD-RAGRKLS 360 (412)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~d-r~grr~~ 360 (412)
....... +...........+.|.+.++. +.++.+.+.......+....+....+++.| |++.++.
T Consensus 211 ~~~~~~~---~~~~~~~~~~~~~~p~~~~~~-----------~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 276 (400)
T PRK11646 211 VTYVLTL---TGYYMLAVQVMLMLPIMVNDI-----------AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHR 276 (400)
T ss_pred HHHHHHH---HHHHHHHHHHHHhhhhhHHhh-----------cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 2221111 111112222334566655433 245667777777777666655555555554 5666666
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 361 LTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 361 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
+..+..+.+++.+.+...++.+...+...+.+.+.+...|...++..|..|+
T Consensus 277 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~ 328 (400)
T PRK11646 277 LMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADA 328 (400)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCc
Confidence 7777777777776666655555554555556666666677778888887773
No 74
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=3.6e-27 Score=206.29 Aligned_cols=364 Identities=21% Similarity=0.281 Sum_probs=259.9
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhc-C-------CCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEW-G-------VSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKK 91 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~ 91 (412)
.+++...+.+...+.+.+.++..+++.+.|.+...| | +++...+.+..+.++|..+|+++.|++.||+|||+
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~ 115 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKK 115 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Confidence 566777888889999999999999999998887665 2 45667789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcch-------hHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHH
Q 015136 92 GFLGIAMITSGIGLLSAFSP-------NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIF 163 (412)
Q Consensus 92 ~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 163 (412)
++...++++.+++++++.+. -.+++.+.|++.|+|.|.- |...+..+|....++||...+...+..++|.+.
T Consensus 116 vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gila 195 (538)
T KOG0252|consen 116 VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILA 195 (538)
T ss_pred hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhh
Confidence 99999999999998777643 2567889999999999998 888899999999999999999999999999888
Q ss_pred HHHHHHHHHhc---------------CChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCCh-HHHHHHHHHHHHhhCC
Q 015136 164 EAALAWIVMIT---------------LNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRT-TEARNILDKIALLNKA 227 (412)
Q Consensus 164 ~~~~~~~l~~~---------------~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 227 (412)
|.+++..+..- .=||..+.+.+++++.++...+.+||++++.....++ +++. ++. .+
T Consensus 196 G~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~---~d~----~k 268 (538)
T KOG0252|consen 196 GGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAA---GDM----KK 268 (538)
T ss_pred ccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhh---hcc----cc
Confidence 88777665431 1299999999999998888888999999876333222 1111 000 00
Q ss_pred CCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015136 228 KLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSK 307 (412)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (412)
.. +.+.++++......+. .++.+..+...+..++.+..+..+..|+.....+|+...+...
T Consensus 269 ~~---------~~~~~~~~~~~~~~~~----------~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~ 329 (538)
T KOG0252|consen 269 VL---------SVDIEAESTAESDVPP----------PSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSV 329 (538)
T ss_pred cc---------ccccchhhccccCCCC----------cccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHH
Confidence 00 0000111100000000 0111123444444446678888899999999999999999988
Q ss_pred ccccccccccccccccCCCC-cchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhh----H
Q 015136 308 LSSTQSKCGTTLTVSQSMHD-SSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSN----I 382 (412)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~----~ 382 (412)
.++..++.+..-.. + .. ..+-....+.....++|..+..+++|++||++..+.+++++.+..+.+....+. .
T Consensus 330 I~~~ig~~~~~~~~--~-~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~ 406 (538)
T KOG0252|consen 330 IFSAIGVIPSANTY--H-ELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTI 406 (538)
T ss_pred HHHhhccCCCcchH--H-HHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccC
Confidence 88766533311000 0 00 012223344455566688888899999999999999999999999998874431 1
Q ss_pred HH-HHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 383 LI-TGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 383 ~~-~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
.. +...+...++..+.......+.+|++|+
T Consensus 407 Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPa 437 (538)
T KOG0252|consen 407 GFVVLYSLTFFFGNFGPNATTFIVPAEIFPA 437 (538)
T ss_pred ceeehHHHHHHHHhcCCCceeEEeehhhchH
Confidence 22 2223333444556677888899999985
No 75
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.95 E-value=3.7e-25 Score=204.36 Aligned_cols=306 Identities=14% Similarity=0.127 Sum_probs=192.6
Q ss_pred HHHHhhHHHhhhhhhhh-hhhhcCCCcchhHHHHHHHHH-HHHHHHHHHHHHHhhhcchhHH-HHHHHHHHHHHHHhhcc
Q 015136 34 VFAEAMEIMILSFIGPA-VKSEWGVSPSAESLLSTVVFA-GNLVGVYLWGLLSDNYGRKKGF-LGIAMITSGIGLLSAFS 110 (412)
Q Consensus 34 ~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~Grr~~~-~~~~~~~~i~~~~~~~~ 110 (412)
.+..........+..|. +.+++|.|++++|++.+...+ ++.++.+..++ +||+||||.+ +.+.++.+++..+.+++
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 102 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWN 102 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHh
Confidence 44455555555555554 678899999999999876655 55566655566 9999999875 45566666777777888
Q ss_pred hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccch--hhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 015136 111 PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKR--GMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIP 187 (412)
Q Consensus 111 ~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~ 187 (412)
++++.+++.+.+.|...+.. +...+++.|+.+++.| +...++.+.+.++|.+++|++++.+.+++|||..|+..++.
T Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~ 182 (393)
T PRK15011 103 RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVA 182 (393)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHH
Confidence 99988766554444333444 7777777787766655 34457888999999999999999999999999999998877
Q ss_pred HHHHHH-HHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhc
Q 015136 188 SFAVLL-LYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLK 266 (412)
Q Consensus 188 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (412)
.++..+ .++++||.++. +++.+ + +.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~---~~~~~---~------------------------~~~----------------------- 209 (393)
T PRK15011 183 FIVCGVMVWLFLPSMRKE---LPLAT---G------------------------TLE----------------------- 209 (393)
T ss_pred HHHHHHHHHhhcCccCCC---Ccccc---c------------------------ccc-----------------------
Confidence 665543 45556765421 00000 0 000
Q ss_pred ccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHH
Q 015136 267 SGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLV 346 (412)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 346 (412)
..++ +++........... ....++....+.|.|.++ +.|.++.+.+.......++.+++++
T Consensus 210 ----~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~l~~----------~~~~~~~~~g~~~~~~~~~~i~~~~ 270 (393)
T PRK15011 210 ----APRR--NRRDTLLLFVICTL---MWGTNSLYIINMPLFIIN----------ELHLPEKLAGVMMGTAAGLEIPTML 270 (393)
T ss_pred ----cccc--ccccHHHHHHHHHH---HHHHHHHHHHHHHHHHHH----------HcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00101111111111 112233333455555432 2467777888877777777888999
Q ss_pred HHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 347 LAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 347 ~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
+.|+++||++||+.+..+.....+....+...++.+...+..++.++..+...+....+..|.+|+
T Consensus 271 ~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~ 336 (393)
T PRK15011 271 IAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG 336 (393)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999888777666555544444344444444444444444455555556666777663
No 76
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.95 E-value=3.4e-25 Score=203.79 Aligned_cols=309 Identities=15% Similarity=0.013 Sum_probs=225.6
Q ss_pred HHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHH----HHHHHHHHHHHH
Q 015136 30 AGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGF----LGIAMITSGIGL 105 (412)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~----~~~~~~~~i~~~ 105 (412)
+.+.++..+.......+++|.+.+++|.|.+++|++.+++.+...++++++|+++||+|||... ..+..+..+ .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--A 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--H
Confidence 3455666666678888899999999999999999999999999999999999999999985433 222222222 2
Q ss_pred HhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 015136 106 LSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALS 184 (412)
Q Consensus 106 ~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~ 184 (412)
....+++++.+++.|.++|.+.+.. +...++..++ +++|+++.|......++|.+++|++++.+.+++|||..|.+.
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~ 164 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAIL 164 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence 3346789999999999999888877 7766666543 578899999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhh
Q 015136 185 SIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITK 264 (412)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (412)
....++.. ..+..+|+++. +++.++. +.
T Consensus 165 ~~~~~~~~-~~~~~~~~~~~---~~~~~~~-------------------------------~~----------------- 192 (382)
T TIGR00902 165 TAGLAFML-IGFLIKPTIPP---KDAIPED-------------------------------ES----------------- 192 (382)
T ss_pred HHHHHHHH-HHHHcCCCCCC---Ccccccc-------------------------------cc-----------------
Confidence 65433222 23333333210 0000000 00
Q ss_pred hcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhH
Q 015136 265 LKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPG 344 (412)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 344 (412)
++.++.+++++++..+...+... ...........+.+.+.++ .|.++...+.......+..+++
T Consensus 193 --~~~~~~~~~l~~~~~~~~l~~~~---l~~~~~~~~~~~~~~~l~~-----------~g~s~~~~g~l~~~~~~~~i~~ 256 (382)
T TIGR00902 193 --QGDSAFIALLKNPMNLRFLAAVC---LIQGAHAAYYGFSAIYWQA-----------AGISASATGLLWGIGVLAEIII 256 (382)
T ss_pred --ccchhHHHHHcChHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-----------CCCCHhHHHHHHHHHHHHHHHH
Confidence 00013344455544433333322 2333444444455655533 4688899999999999999999
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 345 LVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 345 ~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
..+.+++.||+|+|+.+.++.+...+....+.+.++.+.+.....+-++..+...+....++.+. |
T Consensus 257 ~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~ 322 (382)
T TIGR00902 257 FAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-P 322 (382)
T ss_pred HHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 99999999999999999999999999999888888877777788888888888888888888776 5
No 77
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.94 E-value=8.1e-25 Score=201.40 Aligned_cols=304 Identities=11% Similarity=0.026 Sum_probs=212.2
Q ss_pred HHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcch----hHHHHHHHHHHHHHHHhhc
Q 015136 34 VFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRK----KGFLGIAMITSGIGLLSAF 109 (412)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr----~~~~~~~~~~~i~~~~~~~ 109 (412)
++..........+.+|.+.+++|.|.+++|++.+++.++..+++++.|+++||+||| +.+.++..+. .......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 344445567788888999999999999999999999999999999999999999994 3333332222 2223344
Q ss_pred chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 015136 110 SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPS 188 (412)
Q Consensus 110 ~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~ 188 (412)
.++++.+++.|++.|++.+.. +...+++.++ .++|+++.+......++|..+||++++.+.+++|||..|++.++..
T Consensus 91 ~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~ 168 (382)
T PRK11128 91 AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGV 168 (382)
T ss_pred cccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHH
Confidence 688999999999999988877 7666666655 4668888999999999999999999999999999999998877654
Q ss_pred HHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhccc
Q 015136 189 FAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSG 268 (412)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (412)
++..+..++.||.++ ++++++ + .. +.
T Consensus 169 ~~~~~~~~~~~~~~~----~~~~~~-----------------------------~----~~-----------------~~ 194 (382)
T PRK11128 169 ASMLLGQLLRPTIMP----QGESRQ-----------------------------Q----ES-----------------AG 194 (382)
T ss_pred HHHHHHHHccCCCCC----cccccc-----------------------------c----cc-----------------cc
Confidence 444333333333211 000000 0 00 00
Q ss_pred ccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHH
Q 015136 269 FSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLA 348 (412)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 348 (412)
..+++++++++..+......... ...+.....+.+.|.. +.|.++.+.+.......++.++...+.
T Consensus 195 ~~~~~~i~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~-----------~~g~s~~~~g~~~~~~~~~~~~~~~~~ 260 (382)
T PRK11128 195 WPAWKALLKEPTVWRFLLCVSLL---QGSHAAYYGFSAIYWQ-----------AAGYSASTIGYLWSLGVVAEVLIFAFS 260 (382)
T ss_pred cchHHHHHcChhHHHHHHHHHHH---HHHhHhHHHHHHHHHH-----------HCCCCHhHHHHHHHHHHHHHHHHHHHH
Confidence 01445555554443333322222 2222233333444442 246788888988888888999999999
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCC
Q 015136 349 GIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQ 409 (412)
Q Consensus 349 g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 409 (412)
+++.||+++|+.+..+.+..+++.+.+...++.+...+..++.+++.+...+....+..+.
T Consensus 261 g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 321 (382)
T PRK11128 261 NRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR 321 (382)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999998888887777777767666667777777776666666665554
No 78
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.94 E-value=1.6e-24 Score=204.75 Aligned_cols=276 Identities=20% Similarity=0.210 Sum_probs=193.9
Q ss_pred HHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-----cchhH-HHHHHHHHHHH
Q 015136 30 AGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNY-----GRKKG-FLGIAMITSGI 103 (412)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-----Grr~~-~~~~~~~~~i~ 103 (412)
+++..+..+......+...|.+.++.|.|.++++.. +.....+ ++.+++|+++||+ |||+. ++.+.++.+++
T Consensus 17 ~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~ 94 (491)
T PRK11010 17 LLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVA 94 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHH
Confidence 334455666667778888999999999999999997 4444444 6899999999999 99986 55777777777
Q ss_pred HHHhhcc---hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-cCChH
Q 015136 104 GLLSAFS---PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI-TLNWR 178 (412)
Q Consensus 104 ~~~~~~~---~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~w~ 178 (412)
...+++. ++++.+.+.+++.|++.+.. +...++..|++|+++|+++.++...+..+|.++++.++..+.+ ..|||
T Consensus 95 ~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr 174 (491)
T PRK11010 95 IAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQ 174 (491)
T ss_pred HHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHH
Confidence 7666664 47888888999999998887 7888999999999999999999999999999999999999998 57999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccch
Q 015136 179 WLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSS 258 (412)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (412)
..|++.++..++..+..++.||+++.. +++++.++.
T Consensus 175 ~~f~i~a~l~ll~~l~~~~~~e~~~~~---~~~~~~~~~----------------------------------------- 210 (491)
T PRK11010 175 GMYWLMAALLIPCIIATLLAPEPTDTI---PVPKTLEQA----------------------------------------- 210 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcccc---ccccchhhh-----------------------------------------
Confidence 999999877776655555667754210 000000000
Q ss_pred hhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHH-HH
Q 015136 259 RIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVF-LA 337 (412)
Q Consensus 259 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 337 (412)
...+++++++++..+........ .....+....+.+.+.. +..|+++.+.+.... ..
T Consensus 211 ---------~~~~l~~~~~~~~~~~~ll~~~l---~~~~~~~~~~~~~~~l~----------~~~G~s~~~~g~~~~~~g 268 (491)
T PRK11010 211 ---------VVAPLRDFFGRNNAWLILLLIVL---YKLGDAFAMSLTTTFLI----------RGVGFDAGEVGLVNKTLG 268 (491)
T ss_pred ---------HHHHHHHHHcCcCHHHHHHHHHH---HHHHHHHHHHHHHHHHH----------HhcCCCHHHHHHHHHHHH
Confidence 00033334443333322222222 22222223333443331 225788888888874 55
Q ss_pred HcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHH
Q 015136 338 SLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICIL 373 (412)
Q Consensus 338 ~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~ 373 (412)
.++.++|.+++|+++||+|+|+.+.++.++.++..+
T Consensus 269 ~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l 304 (491)
T PRK11010 269 LLATIVGALYGGILMQRLSLFRALMIFGILQGVSNA 304 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 678999999999999999998887766665554443
No 79
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.94 E-value=1e-25 Score=217.43 Aligned_cols=303 Identities=13% Similarity=0.125 Sum_probs=216.8
Q ss_pred HHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHh
Q 015136 28 AYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLS 107 (412)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 107 (412)
+..++..+.........+..++.+.++|+++.++.|++.+.+.++++++.++.+++.||+|||+.+.++.++++++.+++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 44455667777778888999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hcch---------------------------------------------------hHHHHHHHHHHHhhhcCcc-cccee
Q 015136 108 AFSP---------------------------------------------------NYISLVTLRGLVGIGIGSG-PVFSA 135 (412)
Q Consensus 108 ~~~~---------------------------------------------------~~~~~~~~r~l~G~~~g~~-~~~~~ 135 (412)
++.+ .+..++++|+++|+|.+.. +...+
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 7653 2456778999999999998 89999
Q ss_pred eeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC----------------------ChHHHHHHHHHHHHHHHH
Q 015136 136 WFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITL----------------------NWRWLLALSSIPSFAVLL 193 (412)
Q Consensus 136 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------------------~w~~~~~~~~~~~~~~~~ 193 (412)
++.|++|+++|++.++++..+..+|.++|+++++.+.+.+ +||..|++.+++.++..+
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v 275 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSI 275 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987643 277778888877777655
Q ss_pred HHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchh
Q 015136 194 LYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFL 273 (412)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (412)
.++++|++.+....+.+.++.++ +. .++.+. +. +. .. ....++....++
T Consensus 276 ~l~~~p~~lp~~~~~~~~~~~~~--------~~------------~~~~~~--~~-~~-~~-------~~~~~~~~~~~~ 324 (633)
T TIGR00805 276 PFFFFPKALPKEGKRVNVDVHET--------EK------------LEKSED--KS-RK-KN-------SDITKDFPKIIK 324 (633)
T ss_pred HHHhCccccCCcccccchhhhhh--------hc------------cccccc--cc-ch-hh-------hhhHHHHHHHHH
Confidence 56666664321000000000000 00 000000 00 00 00 000000111344
Q ss_pred hccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHc-chhhHHHHHHHHH
Q 015136 274 LLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASL-GELPGLVLAGIIV 352 (412)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~g~l~ 352 (412)
.+++.+ .++...+..+.....++++..+.|.|+++. .|.++.++++......+ +.++|.+++|+++
T Consensus 325 ~Ll~n~---~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~----------~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~ 391 (633)
T TIGR00805 325 RLLCNP---IYMLVILAQVIDSLAFNGYITFLPKYLENQ----------YGISSAEANFLIGVVNLPAAGLGYLIGGFIM 391 (633)
T ss_pred HHHcCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------cCCcHHHHHHHhhhhhhhHHHHHHhhhhhee
Confidence 555544 333444455555667777888888887543 57888898888877665 5689999999999
Q ss_pred Hhhc--hhhHHHHHHHHHHHHHHH
Q 015136 353 DRAG--RKLSLTIMLILVFICILP 374 (412)
Q Consensus 353 dr~g--rr~~l~~~~~~~~~~~~~ 374 (412)
||++ .|+.+..+.++..++.++
T Consensus 392 ~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 392 KKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred eeecccHHHHHHHHHHHHHHHHHH
Confidence 9987 456666666665555443
No 80
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.94 E-value=1.2e-23 Score=195.10 Aligned_cols=312 Identities=18% Similarity=0.134 Sum_probs=214.7
Q ss_pred HHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-----cchh-HHHHHHHHHHHHHH
Q 015136 32 LAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNY-----GRKK-GFLGIAMITSGIGL 105 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-----Grr~-~~~~~~~~~~i~~~ 105 (412)
..++.++.........+|.+.++.|+|.+++|++..+... .+..+++|+++||+ |||| .++++.++.+++..
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~ 83 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIA 83 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHH
Confidence 4466777777888889999999999999999999777776 58899999999999 8876 68888888887777
Q ss_pred Hhhcc---hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHH
Q 015136 106 LSAFS---PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMIT-LNWRWL 180 (412)
Q Consensus 106 ~~~~~---~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~w~~~ 180 (412)
..++. .+++.+++..++.++..+.. ++..+++.|+.|+++|+++.++...+.++|.++++.++..+.+. .|||..
T Consensus 84 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~ 163 (402)
T PRK11902 84 AMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNT 163 (402)
T ss_pred HHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHH
Confidence 76665 35777777777788777777 88889999999999999999999999999999999999998885 599999
Q ss_pred HHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhh
Q 015136 181 LALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRI 260 (412)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (412)
|++.++..++..+..++.||+++.. +++++.++.
T Consensus 164 f~i~a~~~l~~~l~~~~~~e~~~~~---~~~~~~~~~------------------------------------------- 197 (402)
T PRK11902 164 YLLMAGLMLAGALTTLWAPEPEVPA---RPPRSLGEA------------------------------------------- 197 (402)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccc---cccchhHHH-------------------------------------------
Confidence 9998877666555555666654311 000000000
Q ss_pred hhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHH-c
Q 015136 261 RITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLAS-L 339 (412)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 339 (412)
...+++++++++..+................+.. .+.+.. ++.|.++.+.+......+ +
T Consensus 198 -------~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~---~~~~l~----------~~~G~~~~~~g~~~~~~~~~ 257 (402)
T PRK11902 198 -------VVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSL---STTFLI----------RGAGFSAGEVGIVNKTLGLA 257 (402)
T ss_pred -------HHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHH---HHHHHH----------HhcCCCHHHHHHHHhHHHHH
Confidence 0013444555554444443333322211111111 111121 224688888888775544 4
Q ss_pred chhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHH---Hhh-hhhHHHHHHH----HHHHHHHhhHhHHHHhhccCCCC
Q 015136 340 GELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPL---AML-QSNILITGLL----VGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 340 ~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l---~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
+.+++.+++|++.||+|+|+.+..+..+..+..+.+ ... ++.+...... +..++..+..++....++.+.+|
T Consensus 258 ~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 337 (402)
T PRK11902 258 ATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFS 337 (402)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 688999999999999999988877776655554433 232 2333333333 23445566667777888888776
No 81
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.93 E-value=1.7e-23 Score=187.85 Aligned_cols=163 Identities=15% Similarity=0.133 Sum_probs=146.2
Q ss_pred HHHhhhhhhhhhhhhcCCCcch-hHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 015136 40 EIMILSFIGPAVKSEWGVSPSA-ESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVT 118 (412)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~s~~~-~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 118 (412)
.+...+.+.|.+.+++|+|+++ .|.+.+++..++++..++.|+++||+|.|+++.++.+.+++..++.++++++..+.+
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i 120 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQL 120 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788889999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH---HHHHHHHHHH
Q 015136 119 LRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSS---IPSFAVLLLY 195 (412)
Q Consensus 119 ~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~---~~~~~~~~~~ 195 (412)
.|++.|++.|...+...++.+++|+++|+++.++..++..+|.++++++++. ...+|||+.+...- ....+.++..
T Consensus 121 ~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a 199 (511)
T TIGR00806 121 MEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLA 199 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999977777999999999999999999999999999999999999 55689998765442 3333446667
Q ss_pred HhccCCch
Q 015136 196 SLAPESPR 203 (412)
Q Consensus 196 ~~~~~~~~ 203 (412)
+++|..++
T Consensus 200 ~~LP~~~~ 207 (511)
T TIGR00806 200 LFLKRPKR 207 (511)
T ss_pred HhCCCCch
Confidence 88886554
No 82
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=7e-23 Score=177.73 Aligned_cols=317 Identities=16% Similarity=0.181 Sum_probs=244.7
Q ss_pred HHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHH
Q 015136 25 LVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIG 104 (412)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 104 (412)
..+..+...++..++......+..|.+++.|+++..|.+++...++.|+.+.+++.|++.+|+|+|+.++.|..+++++.
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 44555556677788888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhh---cchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc------
Q 015136 105 LLSA---FSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMIT------ 174 (412)
Q Consensus 105 ~~~~---~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------ 174 (412)
.+.. ...++..++++-++.|.|.+.. ....+++....++++..+.+++.+...++|.+++|++++.+..+
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 8874 5678999999999999999998 99999999999999999999999999999999999999988762
Q ss_pred -------------CChHHHHHHHHHHHHHHHHHHHhc--cCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccC
Q 015136 175 -------------LNWRWLLALSSIPSFAVLLLYSLA--PESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDAT 239 (412)
Q Consensus 175 -------------~~w~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (412)
..||.+|...+...++..+..... |+.+....++.+
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~----------------------------- 223 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGA----------------------------- 223 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccc-----------------------------
Confidence 137777777765555443333222 222110000000
Q ss_pred CCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccc
Q 015136 240 SRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTL 319 (412)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (412)
.+.....++++.++.+...+..+++.+ .......|.+.|..+.
T Consensus 224 ---------------------------~~~~~~~~l~~~~~~~~gvl~~FlYVG---~Eva~gsfl~~y~~~~------- 266 (422)
T COG0738 224 ---------------------------SGSAGLSSLFQNKHLRLGVLAIFLYVG---AEVAIGSFLVSYLEEL------- 266 (422)
T ss_pred ---------------------------cccchHHHHHhChHHHHHHHHHHHHHh---HHHHHHHHHHHHHHhc-------
Confidence 000023445556655555555444444 3444445555555332
Q ss_pred ccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHh
Q 015136 320 TVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAF 399 (412)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 399 (412)
.|.+..++....+...++.++|++++.++..|+...+.+.+..++..+.++...+.++ ...+...++.|++.+..+
T Consensus 267 ---~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g-~v~~~~l~~ig~F~simf 342 (422)
T COG0738 267 ---LGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGG-VVALYALFLIGLFNSIMF 342 (422)
T ss_pred ---CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcC-hHHHHHHHHHHHHhHHHH
Confidence 4688899999999999999999999999999999999999888887777777777666 445556778888999999
Q ss_pred HHHHhhccCCCC
Q 015136 400 TIACIFTPEQLG 411 (412)
Q Consensus 400 ~~~~~~~~e~~P 411 (412)
|..++...+..|
T Consensus 343 PTIfslal~~l~ 354 (422)
T COG0738 343 PTIFSLALKNLG 354 (422)
T ss_pred HHHHHHHHhccC
Confidence 999988777665
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.93 E-value=2.7e-23 Score=217.71 Aligned_cols=310 Identities=12% Similarity=0.021 Sum_probs=216.2
Q ss_pred HhhhhhhhhhhhhcCCCc--chhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHh---hcchhHHHH
Q 015136 42 MILSFIGPAVKSEWGVSP--SAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLS---AFSPNYISL 116 (412)
Q Consensus 42 ~~~~~~~~~~~~~~~~s~--~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~~~~~~~ 116 (412)
.......+.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++.+++.++. ...++++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 106 (1146)
T PRK08633 27 GHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLA 106 (1146)
T ss_pred HHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 344455566666777654 346899999999999999999999999999999999887766555443 345789999
Q ss_pred HHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc--------C-ChHHHHHHHHH
Q 015136 117 VTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMIT--------L-NWRWLLALSSI 186 (412)
Q Consensus 117 ~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--------~-~w~~~~~~~~~ 186 (412)
++.|++.|++.+.. ++..+++.|++|+++|++++++...+.++|.++|+.+++++.+. . +|++.+.+..+
T Consensus 107 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 186 (1146)
T PRK08633 107 FAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLL 186 (1146)
T ss_pred HHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHH
Confidence 99999999999998 88889999999999999999999999999999999999998875 2 34444444443
Q ss_pred HHH-HHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhh
Q 015136 187 PSF-AVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKL 265 (412)
Q Consensus 187 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (412)
... +.++..+.+||.|.....+.+.++ .. . .
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------------------------------------~-----~ 218 (1146)
T PRK08633 187 AVAVLGLIFAYRLPKVPAAAPEVFDKKK-YL------------------------------------------F-----P 218 (1146)
T ss_pred HHHHHHHHHHhcCcCCCCCCcccccccc-cc------------------------------------------c-----H
Confidence 333 334444556766532110000000 00 0 0
Q ss_pred cccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCc-chHHHHHHHHcchhhH
Q 015136 266 KSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDS-SLYLSVFLASLGELPG 344 (412)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g 344 (412)
+.....++.+++.+..+...+..... ....+....+.+.+..+ ..|.+.. ..++......++.+++
T Consensus 219 ~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----------~~g~s~~~~~g~~~~~~~ig~~~g 285 (1146)
T PRK08633 219 KLLWRNLKLLRSDRVLWLAIIGLSYF---WFISQLAQANFPAYAKE----------VLGLDNTFQVQYLLAASAIGIGIG 285 (1146)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHH---HHHHHHHHHhhHHHHHH----------HhCCCcHHHHHHHHHHHHHHHHHH
Confidence 00001334444444433332222221 22223333344444422 2467777 8899999999999999
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 345 LVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 345 ~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
.++.|++.||+++++.+.++.++.+++.+.+.+..+.+...+..++.+++.+...+...+++.+..|+
T Consensus 286 ~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 353 (1146)
T PRK08633 286 SLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPE 353 (1146)
T ss_pred HHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCc
Confidence 99999999999999888888888888887777766666666777778887777777788888887764
No 84
>PTZ00207 hypothetical protein; Provisional
Probab=99.92 E-value=2.2e-23 Score=196.02 Aligned_cols=178 Identities=15% Similarity=0.135 Sum_probs=140.5
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
..++|.++........+.+ ..+.++.+.|.+.+++|+|.++.+++.++. ....+++++.|++.||+|+|++++++.++
T Consensus 23 e~~Rw~~lva~~~~~~~~g-~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll 100 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTS-FMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTV 100 (591)
T ss_pred ccchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 3566766665555444443 446778889999999999999999998874 44566788899999999999999999999
Q ss_pred HHHHHHHhhcc------hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015136 100 TSGIGLLSAFS------PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVM 172 (412)
Q Consensus 100 ~~i~~~~~~~~------~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 172 (412)
++++.++++++ ++++.+++.|++.|+|.+.. +.....+.+++| ++||+++|+...+.++|.++.+.+...+.
T Consensus 101 ~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 101 FCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999886 68999999999999999887 777777888886 78999999999999999986544444443
Q ss_pred hcCChHHHHHHHHHHHHHHHH-HHHhccCC
Q 015136 173 ITLNWRWLLALSSIPSFAVLL-LYSLAPES 201 (412)
Q Consensus 173 ~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~ 201 (412)
. .+|+..|++.+++.++..+ .+.++++.
T Consensus 180 ~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p 208 (591)
T PTZ00207 180 S-DNTSAYFFFLMSFALVVGILAIVFMRLP 208 (591)
T ss_pred H-HhHHHHHHHHHHHHHHHHHHHHhheeCC
Confidence 3 4688888888877766543 34444433
No 85
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.92 E-value=1.3e-23 Score=219.24 Aligned_cols=323 Identities=13% Similarity=0.001 Sum_probs=214.8
Q ss_pred HHHHHHHHHHHhhHHHhhhhhhh-hhhhhcCCCc-chhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHH---HHHHHH
Q 015136 27 FAYAGLAVFAEAMEIMILSFIGP-AVKSEWGVSP-SAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLG---IAMITS 101 (412)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~-~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~---~~~~~~ 101 (412)
+...++..+.+.+....+..... .+..+.+.+. ...++..+++.+.+.+.++++|+++||+|||+++.. +.+...
T Consensus 17 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~ 96 (1140)
T PRK06814 17 FWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIA 96 (1140)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHH
Confidence 33344444444444444333332 3444444333 457888899999999999999999999999997643 222223
Q ss_pred HHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHH
Q 015136 102 GIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWL 180 (412)
Q Consensus 102 i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~ 180 (412)
+..+.....++++.++++|+++|++.+.. ++..+++.+++|+++|++++|+.+++.++|.++||++++++.+..+|++.
T Consensus 97 ~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~ 176 (1140)
T PRK06814 97 ALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVIL 176 (1140)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 33333334589999999999999999988 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhh
Q 015136 181 LALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRI 260 (412)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (412)
|+..++..++.+++.+++++++... ++...+. ...+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~---------------------------------------- 213 (1140)
T PRK06814 177 VALLMGIAVLGWLASLFIPKTGNAA--PDLKIDR-NIIRS---------------------------------------- 213 (1140)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCCC--CCCeecc-chHHH----------------------------------------
Confidence 9555555555555566666653210 0000000 00000
Q ss_pred hhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcc
Q 015136 261 RITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLG 340 (412)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (412)
....++.+++.+..+.. .+..+...+.......+.|.|.++. .|.++...++..+..+++
T Consensus 214 -------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~----------~g~~~~~~g~~~~~~~~g 273 (1140)
T PRK06814 214 -------TITLLKYAKADKRIWLA---ILGISWFWLVGAVVLSQLPLLAKET----------LGGDENVATLFLAVFSVG 273 (1140)
T ss_pred -------HHHHHHHHhcCchHHHH---HHHHHHHHHHHHHHHHHhHHHHHHH----------cCCchHHHHHHHHHHHHH
Confidence 00023334444333332 2222223333444555666665332 468888999999999999
Q ss_pred hhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhh--------------------hhhHHHHHHHHHHHHHHhhHhH
Q 015136 341 ELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAML--------------------QSNILITGLLVGARMFAFGAFT 400 (412)
Q Consensus 341 ~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~--------------------~~~~~~~~~~~~~~~~~~~~~~ 400 (412)
.++|.++.|+++|+.++++.+..+.++.+++.+.+.+. .+.+...+..++.+++.+...+
T Consensus 274 ~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 353 (1140)
T PRK06814 274 VAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIV 353 (1140)
T ss_pred HHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHH
Confidence 99999999999988876666555555555444433332 4445556666777777777777
Q ss_pred HHHhhccCCCCC
Q 015136 401 IACIFTPEQLGW 412 (412)
Q Consensus 401 ~~~~~~~e~~P~ 412 (412)
...+++.+..|+
T Consensus 354 ~~~~~~~~~~p~ 365 (1140)
T PRK06814 354 PLFAALQAWANP 365 (1140)
T ss_pred HHHHHHHhhCCc
Confidence 788888887764
No 86
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.92 E-value=6e-23 Score=191.56 Aligned_cols=320 Identities=15% Similarity=0.033 Sum_probs=188.6
Q ss_pred HHHHhhHHHhhhhhhh-hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhh---c
Q 015136 34 VFAEAMEIMILSFIGP-AVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSA---F 109 (412)
Q Consensus 34 ~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~---~ 109 (412)
.++.....+...+..| .+.+++|+|+.+.|++.+.+.++..+++++.|+++||+|||++++++..+.+++..... .
T Consensus 19 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 98 (420)
T PRK09528 19 FFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVF 98 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444 55666999999999999999999999999999999999999999887666655443221 1
Q ss_pred chhHH-HHHHHHHHHhhhcCcc-ccceeeeeeccc--ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 015136 110 SPNYI-SLVTLRGLVGIGIGSG-PVFSAWFLEFVP--AAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSS 185 (412)
Q Consensus 110 ~~~~~-~~~~~r~l~G~~~g~~-~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~ 185 (412)
++... ......++.++..+.. ......+.++.+ .+++++..|......++|..++|.+++.+.+ .+|++.|++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~ 177 (420)
T PRK09528 99 APLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGS 177 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHH
Confidence 11111 1111222233322222 222222223322 3456778889899999999999999999877 48999999888
Q ss_pred HHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhh
Q 015136 186 IPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKL 265 (412)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (412)
+..++..+..++.+++++..... ++++ + .+ ++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~---------------------------~~-----~~-------------- 209 (420)
T PRK09528 178 GSALILLVLLFFAKPDAPSTAKV-ANAL-G---------------------------AN-----AS-------------- 209 (420)
T ss_pred HHHHHHHHHHhcccccccchhhh-ccch-h---------------------------cc-----cc--------------
Confidence 77766655554443332110000 0000 0 00 00
Q ss_pred cccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHH
Q 015136 266 KSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGL 345 (412)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 345 (412)
+...++.++.++++..+...+.. +.....+.....+.|.+..+.. .+.+.+....+.......+..+++.
T Consensus 210 ~~~~~~~~~~l~~~~~~~l~l~~---~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~ 279 (420)
T PRK09528 210 AVSLKDALALLKLPKFWFLVLYV---IGVACFYDVFDQQFPNFFASFF-------ATPEQGTRVFGYLNSFQVFLEALIM 279 (420)
T ss_pred cccHHHHHHHccCCCeEeehHHH---HHHHHHHHHHHHHHHHHHHHHH-------hccCcchHHHHHHHHHHHHHHHHHH
Confidence 00000222233333222222111 1111111112222332221110 1123455667888888888889999
Q ss_pred HHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 346 VLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 346 ~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
++.|++.||+|+|+.+..+..+.++..+++.+.++.+......++.+.......+....+..|.+|+
T Consensus 280 ~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 346 (420)
T PRK09528 280 FFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDV 346 (420)
T ss_pred HHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 9999999999999999998888888888877766666666656666666655556666777776653
No 87
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.91 E-value=1.1e-22 Score=188.39 Aligned_cols=317 Identities=16% Similarity=0.114 Sum_probs=197.0
Q ss_pred HHHHHHhhHHHhhhhhhhhh-hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHh---
Q 015136 32 LAVFAEAMEIMILSFIGPAV-KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLS--- 107 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~--- 107 (412)
...++.......+.+..|.+ .+++|.|+.+.|++.+++.++..+++++.|+++||+|||+.++.+....+++....
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~ 88 (396)
T TIGR00882 9 LFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIY 88 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555556666666654 56789999999999999999999999999999999999999988776665544322
Q ss_pred hcch-----hHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHH
Q 015136 108 AFSP-----NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLL 181 (412)
Q Consensus 108 ~~~~-----~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~ 181 (412)
...+ ....+++.+++.|++.+.. +....+..|.. ++++...+......++|.+++|.+++.+.+ .+||..|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f 165 (396)
T TIGR00882 89 VFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVF 165 (396)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHH
Confidence 1111 2334566788888888876 66655555532 334556778888889999999999998765 5999999
Q ss_pred HHHHHHHHHHHHHHHhc-cCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhh
Q 015136 182 ALSSIPSFAVLLLYSLA-PESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRI 260 (412)
Q Consensus 182 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (412)
++.+++.++..+..+.. +|+|+. ++.++ +. +++ . + +
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--------~~----------------~~~--~-~-~-------- 202 (396)
T TIGR00882 166 WLGSGFALILMLLLMFAKPKAPSS-------ATVAN--------AL----------------GAN--A-S-A-------- 202 (396)
T ss_pred HHHHHHHHHHHHHHHHhCCCCchh-------hhhhc--------cc----------------ccc--c-C-C--------
Confidence 99887777665444443 332210 00000 00 000 0 0 0
Q ss_pred hhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcc
Q 015136 261 RITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLG 340 (412)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (412)
.+.++.+++++++..+..... .+.....+.....+.+.|.++.. .+.+.+....+.......+.
T Consensus 203 ------~~~~~~~~~l~~~~~~~~~l~---~~~~~~~~~~~~~~~~~y~~~~~-------~~~~~~~~~~g~~~~~~~i~ 266 (396)
T TIGR00882 203 ------FSLKLALELFRQRKFWMFVLY---VVGVACVYDVFDQQFANFFTSFF-------ATPQQGTRVFGYVTTMGELL 266 (396)
T ss_pred ------CCHHHHHHHHcCCcHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhc-------cccccchHHHHHHHHHHHHH
Confidence 000133444444433222222 22222222222223343332211 11234455667788888888
Q ss_pred hhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCC
Q 015136 341 ELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQL 410 (412)
Q Consensus 341 ~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 410 (412)
..++.+..|++.||+|||+.+.++..+.++...++...++.+......++.+.+..........+..|..
T Consensus 267 ~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 336 (396)
T TIGR00882 267 NALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQF 336 (396)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8999999999999999999999988888887777666666665555555555544433333334444433
No 88
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.91 E-value=3.3e-22 Score=170.89 Aligned_cols=311 Identities=17% Similarity=0.179 Sum_probs=247.8
Q ss_pred HHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHH
Q 015136 24 YLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGI 103 (412)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 103 (412)
+..+..+.+..+.---.....++.++.+.+++|+|.+..|++.++..+...+.+++..+++.|+|.++.+..++++.+++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45555555555555566678889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHH
Q 015136 104 GLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITL-NWRWLL 181 (412)
Q Consensus 104 ~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~w~~~~ 181 (412)
.++-... +.+.++.+-.+.|.|.+.. ...+..+-+.+| |+-+..+|++....++|.++++.+...+.++. |||...
T Consensus 91 ~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL 168 (395)
T COG2807 91 ILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGAL 168 (395)
T ss_pred HHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHH
Confidence 9988877 7888899999999999998 778888888887 77899999999999999999999999998877 799999
Q ss_pred HHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhh
Q 015136 182 ALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIR 261 (412)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (412)
.+-++++++.++.|+.-...++.. +.+
T Consensus 169 ~~WAl~allAl~~WlPq~~r~~~~--~~~--------------------------------------------------- 195 (395)
T COG2807 169 GFWALLALLALLIWLPQALREQAA--SIA--------------------------------------------------- 195 (395)
T ss_pred HHHHHHHHHHHHHHhhhccccccc--ccc---------------------------------------------------
Confidence 999998888777654432111000 000
Q ss_pred hhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcch
Q 015136 262 ITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGE 341 (412)
Q Consensus 262 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (412)
.+..+-..+++++ ..+...+.+..++..+|....|+|.+..| .|++..+++.+.+...+..
T Consensus 196 -----~~~~~~~~vw~~~---~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-----------~G~sa~~aG~llsl~~l~~ 256 (395)
T COG2807 196 -----TKLVSVRKVWRSP---LAWQVTLFMGLQSLLYYIVIGWLPAILID-----------RGLSAAEAGSLLSLMQLAQ 256 (395)
T ss_pred -----cccccccccccCc---hhHHHHHHHHhhHHHHHHHHHHHHHHHHH-----------cCCCHHHhhhHHHHHHHHH
Confidence 0000112234443 33455566667889999999999998855 4699999999999999999
Q ss_pred hhHHHHHHHHHHhh-chhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCC
Q 015136 342 LPGLVLAGIIVDRA-GRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQ 409 (412)
Q Consensus 342 ~~g~~~~g~l~dr~-grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 409 (412)
++.++....+.+|. .+|+.......++.++.+.+.+.+....... .++.|++.++.+|....++.+.
T Consensus 257 ~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~r 324 (395)
T COG2807 257 LPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLR 324 (395)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhh
Confidence 99999999999985 5788888888888888888877444333322 5788888899999887776554
No 89
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.91 E-value=8.7e-22 Score=184.05 Aligned_cols=359 Identities=19% Similarity=0.187 Sum_probs=219.7
Q ss_pred HHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 015136 27 FAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLL 106 (412)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 106 (412)
+...++.....++.....+..++.+..++|- .....|+.+.+.++.+++.++.|+++|.||||.+++.+.++..+|.++
T Consensus 46 ~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv 124 (599)
T PF06609_consen 46 FAAFSLAVIAAYFVLVLPASILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIV 124 (599)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHH
Confidence 3334454555555666667778999999985 467889999999999999999999999999999999999999999999
Q ss_pred hhcchhHHHHHHHHHHHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 015136 107 SAFSPNYISLVTLRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSI 186 (412)
Q Consensus 107 ~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~ 186 (412)
++.++|...++++..+.|+|.|........++|..|.|.|+...++...........++.++..+..+.+|||.|++.++
T Consensus 125 ~atA~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i 204 (599)
T PF06609_consen 125 CATAQNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFII 204 (599)
T ss_pred hhcCCcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHH
Confidence 99999999999999999999887655555689999999999888877766666666778888777777899999999988
Q ss_pred HHHHHHHHHHhccCCchhhhhcCCh---HHHHHHHHHHH-------------HhhCCC-----CCCCccccccCCCCCcc
Q 015136 187 PSFAVLLLYSLAPESPRYLNVKGRT---TEARNILDKIA-------------LLNKAK-----LPNGMLVSDATSRPDEE 245 (412)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-------------~~~~~~-----~~~~~~~~~~~~~~~~~ 245 (412)
...+.++..+++...|++...++++ .+..+.++.+. +.+-.. ....+......
T Consensus 205 ~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lv------ 278 (599)
T PF06609_consen 205 WSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLV------ 278 (599)
T ss_pred HHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHH------
Confidence 7766644432222223322222211 11112222210 011000 00000000000
Q ss_pred cCCCCCCCcccchhhhhhh--hcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccc
Q 015136 246 LAPPDNTPLLTSSRIRITK--LKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQ 323 (412)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (412)
..--...---.+|.. .+.+..+.+. ++++ |.+....+..+.....+|....+.|...... +
T Consensus 279 ----iG~~~Lv~F~~wE~~~~~~~Pl~P~~L-f~~~--r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~v----------f 341 (599)
T PF06609_consen 279 ----IGFVLLVAFVVWEWFGAPKDPLFPHRL-FKDR--RGFAALLVISFISGMNFFSVNILWPQQVVNV----------F 341 (599)
T ss_pred ----HHHHHHHHHHHhhhhccCCCCcCCHHH-hccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----------c
Confidence 000000000112211 1223334443 3332 2233333444445555666655555443211 1
Q ss_pred CCCC---cchHHHHHHHHcchhhHHHHHHHHHHhhchhhH-HHHHHHHHHHHHHHHHh--hhhhHHHHHHHHHHHHHHhh
Q 015136 324 SMHD---SSLYLSVFLASLGELPGLVLAGIIVDRAGRKLS-LTIMLILVFICILPLAM--LQSNILITGLLVGARMFAFG 397 (412)
Q Consensus 324 ~~~~---~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~-l~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~ 397 (412)
+.++ ...++.....+.+..+|.++.|.+..+++|-|. ++++..++.+++-++.. .++....+.+.++.+++.+.
T Consensus 342 ~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~ 421 (599)
T PF06609_consen 342 GSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGG 421 (599)
T ss_pred cCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHH
Confidence 2222 345677778888888999999999999886444 45666665554444443 23333445666677777766
Q ss_pred HhHHHHhhccCC
Q 015136 398 AFTIACIFTPEQ 409 (412)
Q Consensus 398 ~~~~~~~~~~e~ 409 (412)
......+.+.-.
T Consensus 422 ~~~~~~~~~ql~ 433 (599)
T PF06609_consen 422 ILVPAIVIAQLI 433 (599)
T ss_pred HHHHHHHeeEee
Confidence 655555444333
No 90
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.91 E-value=1.1e-21 Score=184.57 Aligned_cols=174 Identities=14% Similarity=0.097 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHHhhHHHhhh-hhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh-hcchhHHHHHHHHHHHH
Q 015136 26 VFAYAGLAVFAEAMEIMILS-FIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDN-YGRKKGFLGIAMITSGI 103 (412)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~i~ 103 (412)
.+..+++..+...+..+.+. ....++.+++|.+.++.+++.+.+.....+..+++|+++|| +||||+++++.++++++
T Consensus 15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g 94 (489)
T PRK10207 15 PFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIG 94 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHH
Confidence 34444455555656655554 44556678899999999999999999999999999999999 99999999999999999
Q ss_pred HHHhhcchhHHH-HHHHHHHHhhhcCcc-ccceeeeeeccccc--chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHH
Q 015136 104 GLLSAFSPNYIS-LVTLRGLVGIGIGSG-PVFSAWFLEFVPAA--KRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRW 179 (412)
Q Consensus 104 ~~~~~~~~~~~~-~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~ 179 (412)
.++++++.+... ++++|+++|+|.|.. +...+++.|.+|++ +|+++.+++..+.++|.++||.+++++.++.|||+
T Consensus 95 ~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~ 174 (489)
T PRK10207 95 YFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSV 174 (489)
T ss_pred HHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHH
Confidence 999988876454 557899999999998 88889999999877 45889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcc
Q 015136 180 LLALSSIPSFAVLLLYSLAP 199 (412)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~ 199 (412)
.|++.++..++.++.+.+.+
T Consensus 175 ~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 175 TYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred HHHHHHHHHHHHHHHHHHcc
Confidence 99987654443344444443
No 91
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.91 E-value=1.4e-21 Score=183.82 Aligned_cols=171 Identities=14% Similarity=0.030 Sum_probs=145.8
Q ss_pred HHHHHHHHHHhhHHHhhhhhhhhhh-hh--cCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh-hcchhHHHHHHHHHHHH
Q 015136 28 AYAGLAVFAEAMEIMILSFIGPAVK-SE--WGVSPSAESLLSTVVFAGNLVGVYLWGLLSDN-YGRKKGFLGIAMITSGI 103 (412)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~i~ 103 (412)
..+.+..+...+..+...+.+|.+. ++ +|++..+.+++.+.+.++..++.+++|+++|| +|||++++++.++.+++
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g 92 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLG 92 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 3344556666666666666666664 44 89999999999999999999999999999999 89999999999999999
Q ss_pred HHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccc---hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHH
Q 015136 104 GLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAK---RGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRW 179 (412)
Q Consensus 104 ~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~ 179 (412)
.++.+++++.+.+.++|++.|+|.|.. +...++++|++|+++ |+++.++.+.+.++|.++||.+++.+.++.|||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~ 172 (475)
T TIGR00924 93 HFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHV 172 (475)
T ss_pred HHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHH
Confidence 999999888889999999999999988 888899999998754 8889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 015136 180 LLALSSIPSFAVLLLYSLA 198 (412)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~ 198 (412)
.|.+.++..++..+..++.
T Consensus 173 ~f~~~~~~~~~~~l~~~~~ 191 (475)
T TIGR00924 173 GFNLAAVGMVIGLLTFFAG 191 (475)
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 9999876555544444343
No 92
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.91 E-value=9e-23 Score=174.76 Aligned_cols=304 Identities=19% Similarity=0.114 Sum_probs=189.2
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCccccceeee
Q 015136 58 SPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSGPVFSAWF 137 (412)
Q Consensus 58 s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~i 137 (412)
+..-.|.+.+.|.++..+.++.+|.++||+|||++++++++..++...+.+.+.|+..+.++|++.|+.-|-..+..+++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAii 145 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAII 145 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHH
Confidence 44567999999999999999999999999999999999999999999999999999777777999999999888899999
Q ss_pred eecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh---cCChHHHHHHH----HHHHHH-HHHHHHhccCCchhhhhcC
Q 015136 138 LEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI---TLNWRWLLALS----SIPSFA-VLLLYSLAPESPRYLNVKG 209 (412)
Q Consensus 138 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~w~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~ 209 (412)
+|.+++|+|+++++....+.++|.++||.+++++.. ..| ++.|... .+.... .....+++||+-+...+++
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~ 224 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRND 224 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhcc
Confidence 999999999999999999999999999999999987 222 2222221 122222 2345677888743221110
Q ss_pred ChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHH---HHHH
Q 015136 210 RTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVR---TTLL 286 (412)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~ 286 (412)
...+..+..+.. .+....+ +.+ ....+.+.+... ....
T Consensus 225 ~~~~~~~~~~~~----------------------~~~~~~~----------~~~-------~v~~lrn~p~~~~i~~~~i 265 (451)
T KOG2615|consen 225 EHSTLQEAADDR----------------------LALLKFA----------RIF-------KVAALRNPPLLDFISVLRI 265 (451)
T ss_pred cccchhhhhhhh----------------------hhhcchh----------hhh-------hhhhhcCccccchHHHHHH
Confidence 001011000000 0000000 000 000000011000 0011
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhc--hhhHHHHH
Q 015136 287 LWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAG--RKLSLTIM 364 (412)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g--rr~~l~~~ 364 (412)
...-.+.....+-+.....+. +.++..|+++.+.|.+++..++...+.+..-....||.. -+..+..+
T Consensus 266 ~~l~~~ly~~l~s~~~~t~~~----------l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~ 335 (451)
T KOG2615|consen 266 FGLHYFLYLELFSGLENTVLF----------LTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFS 335 (451)
T ss_pred HHHHHHHHHHHHHHHHhhHHH----------hhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHH
Confidence 111111111111111111221 123557899999999988887777777776667777765 55566666
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 365 LILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 365 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
..++.-..+.+........+.....+..+......+-...++....|
T Consensus 336 l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~ 382 (451)
T KOG2615|consen 336 LLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGP 382 (451)
T ss_pred HHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCC
Confidence 66666666666666665555555555555544444444444444433
No 93
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.90 E-value=8e-22 Score=185.25 Aligned_cols=299 Identities=14% Similarity=0.057 Sum_probs=202.7
Q ss_pred hhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh----hcchh-HHHHHHHHHHHHHHHhhcchh------HH
Q 015136 46 FIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDN----YGRKK-GFLGIAMITSGIGLLSAFSPN------YI 114 (412)
Q Consensus 46 ~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~-~~~~~~~~~~i~~~~~~~~~~------~~ 114 (412)
...+.+.+++|+++.++|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++...++ ..
T Consensus 21 ~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~ 100 (437)
T TIGR00792 21 YLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLV 100 (437)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHH
Confidence 45567778899999999999999999999999999999997 68755 566788888888777766543 45
Q ss_pred HHHHHHHHHhhhcCcc-ccceeeeeecc-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-------cCChHHHHHHHH
Q 015136 115 SLVTLRGLVGIGIGSG-PVFSAWFLEFV-PAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI-------TLNWRWLLALSS 185 (412)
Q Consensus 115 ~~~~~r~l~G~~~g~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~w~~~~~~~~ 185 (412)
.+++.+++.+++.+.. ....++..|.. ++++|++..++.+.+..+|..+++.+.+.+.. ..+||+.+.+.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~ 180 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLA 180 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHH
Confidence 5667788888888876 56667888887 56899999999999989988887776665542 458999999888
Q ss_pred HHHHHHHHH-HHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhh
Q 015136 186 IPSFAVLLL-YSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITK 264 (412)
Q Consensus 186 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (412)
++.++..+. .+..+|+++. .+.++ + + +.
T Consensus 181 ~l~~~~~~~~~~~~~e~~~~----~~~~~---------------------------------~--~-~~----------- 209 (437)
T TIGR00792 181 LIGVVSLIICFFGTKERYSE----IPKNI---------------------------------E--K-KL----------- 209 (437)
T ss_pred HHHHHHHHHHHcCCEecCCC----CCccc---------------------------------c--c-CC-----------
Confidence 777666443 4455554310 00000 0 0 00
Q ss_pred hcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhH
Q 015136 265 LKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPG 344 (412)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 344 (412)
+..+.++.+++++..+.... ..+......+....+.+.+.+.. .+ ++...+.......++.+++
T Consensus 210 --~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~~~~i~~ii~ 273 (437)
T TIGR00792 210 --SLKQIFKALFKNDQLLILCL---AYLFYNLAFNIKNGVQVYYFTYV----------LG-DPELFSYMGSIAIVAGLIG 273 (437)
T ss_pred --CHHHHHHHHhCCHHHHHHHH---HHHHHHHHHHHHcchhheeEeee----------cC-ChHHHHHHHHHHHHHHHHH
Confidence 00013344444443333322 22222233333333333333211 22 3445566667778889999
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 345 LVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQ-SNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 345 ~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
.++.++++||+|+|+.+..+..+.+++.+.+.+.. +.+...+..++.+++.+...+..+++.+|..|
T Consensus 274 ~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 341 (437)
T TIGR00792 274 VLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVD 341 (437)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999888888777666543 33445555667777778888888888887754
No 94
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.90 E-value=9.9e-22 Score=182.38 Aligned_cols=316 Identities=11% Similarity=0.024 Sum_probs=196.9
Q ss_pred HHHHHHhhHHHhh-hhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcc-hhHHHHHHHHHHHHHHHhhc
Q 015136 32 LAVFAEAMEIMIL-SFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGR-KKGFLGIAMITSGIGLLSAF 109 (412)
Q Consensus 32 ~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~~~~~~~~~~i~~~~~~~ 109 (412)
+..+..+...... ++..+.+.+++|++.+++|++.+++.++..+++++.|.++||+|| |+++.++.++.+++..+..+
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~ 88 (418)
T TIGR00889 9 FMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ 88 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555 556677778899999999999999999999999999999999965 77888888888888888888
Q ss_pred chhHHHHHHHHHHHhhhcCcc-ccceee----ee----ecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHH
Q 015136 110 SPNYISLVTLRGLVGIGIGSG-PVFSAW----FL----EFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWL 180 (412)
Q Consensus 110 ~~~~~~~~~~r~l~G~~~g~~-~~~~~~----i~----~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~ 180 (412)
.++++.+++.|++.|++.+.. +...+. .. |......|.+..| .+|.+++|.+++.+.....|+ .
T Consensus 89 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~ 161 (418)
T TIGR00889 89 VTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-Q 161 (418)
T ss_pred hcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-H
Confidence 899999999999999987765 544332 11 2222233444444 368888888888774333455 3
Q ss_pred HHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhh
Q 015136 181 LALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRI 260 (412)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (412)
|++.++..++..+..+++||+|+... +++.+.++..
T Consensus 162 f~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~~~~~------------------------------------------ 197 (418)
T TIGR00889 162 LYITAGSSALLGVFALTLPDIPVAKS--TAKMSIKVML------------------------------------------ 197 (418)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcc--ccccCHHHHh------------------------------------------
Confidence 55555555555445566777653110 0000000000
Q ss_pred hhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcc
Q 015136 261 RITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLG 340 (412)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (412)
+ .+.+++++.+.........+. ..........+.+.+.++.+..+ ....+......+.......+.
T Consensus 198 -------~-~~~~~~~k~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~g~~~~~~~i~ 263 (418)
T TIGR00889 198 -------G-LDAFILFKNKRMAIFFFFSML---LGAPLQITNIFGNGFLHEFGRNP---EFADSFVVKNASIWMSLSQFS 263 (418)
T ss_pred -------h-hhHHHHhcCCCeeeHHHHHHH---HHhHHHHHHHhHHHHHHHhcccc---cccchhhhhhHHHHHHHHHHH
Confidence 0 011222332222222222211 11112222233343332221000 000123346678888888999
Q ss_pred hhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 341 ELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQS----NILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 341 ~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
.+++.+..|++.||+|+|+++..+.++..++...+..... .+...+..++.+++.+...+....++.|.+|+
T Consensus 264 ~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~ 339 (418)
T TIGR00889 264 EIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPV 339 (418)
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Confidence 9999999999999999999999999988888766665321 23344456666766667777778888888773
No 95
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.89 E-value=3.8e-21 Score=180.47 Aligned_cols=320 Identities=17% Similarity=0.109 Sum_probs=237.8
Q ss_pred HHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 015136 27 FAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLL 106 (412)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 106 (412)
+-.++++.+...++..+.....+.+..+..-|+..++++.++..+...+.++++|.++||++||++++.+.++.++..+.
T Consensus 12 Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~ 91 (524)
T PF05977_consen 12 FRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALL 91 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Confidence 33445666777777777788888888888889999999999999999999999999999999999999998887766544
Q ss_pred hhc-----chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHH
Q 015136 107 SAF-----SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWL 180 (412)
Q Consensus 107 ~~~-----~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~ 180 (412)
.++ ..+.+.+++.-++.|++.+.. |.-.+++.|..|+++...+.++.+...++..++||.++|.+....|-.+.
T Consensus 92 L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~ 171 (524)
T PF05977_consen 92 LAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAA 171 (524)
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 332 247888999999999999998 99999999999999999999999999999999999999999998898899
Q ss_pred HHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhh
Q 015136 181 LALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRI 260 (412)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (412)
|.+.++..++.+......+++++ +++.. .++..+.+.
T Consensus 172 f~inalsfl~~i~~l~~~~~~~~---~~~~~--~e~~~~~l~-------------------------------------- 208 (524)
T PF05977_consen 172 FLINALSFLISILALLRWKPPPP---PSSLP--RERFFSALR-------------------------------------- 208 (524)
T ss_pred HHHHHHHHHHHHHHHHHcccccc---ccccc--hhhhhhhHH--------------------------------------
Confidence 99888766655444444433221 00000 000000000
Q ss_pred hhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcc
Q 015136 261 RITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLG 340 (412)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (412)
..++-+.+.+..+..+.....+...... ....+|.+.++ ..|.++...|++....+++
T Consensus 209 ---------~G~ryv~~~~~l~~~l~~~~~~~l~~~a---~~aLlPl~a~~----------~l~~~a~~yGll~a~~gvG 266 (524)
T PF05977_consen 209 ---------EGLRYVRSSPPLRSVLLRSFLFNLFASA---VWALLPLFARD----------VLGGGASGYGLLLAAFGVG 266 (524)
T ss_pred ---------HHHHHHhcchHHHHHHHHHHHHHHhhhH---HHHhhhHHHHH----------HhCCcHHHHHHHHHHHHHH
Confidence 0222233334334333332222222222 22334544432 2467888999999999999
Q ss_pred hhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 341 ELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 341 ~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
.++|.++.+++.+|+++++++..+.++.+++.+.+.+.++.+...+.+++.|++.........+...+..|
T Consensus 267 ai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P 337 (524)
T PF05977_consen 267 AILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVP 337 (524)
T ss_pred HHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999998888888888887788888888877777766666666555
No 96
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.89 E-value=1.2e-22 Score=175.08 Aligned_cols=274 Identities=18% Similarity=0.076 Sum_probs=199.3
Q ss_pred hhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-c
Q 015136 53 SEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-P 131 (412)
Q Consensus 53 ~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~ 131 (412)
++.+-.++++|++.+...+...+.+++.|.+.||+|+|..+++|.+.+..++++.++..++++++++|.++|+|.+.. .
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 344567789999999999999999999999999999999999999999999999999999999999999999999998 8
Q ss_pred cceeeeeecccccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCC
Q 015136 132 VFSAWFLEFVPAAK-RGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGR 210 (412)
Q Consensus 132 ~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (412)
...+++++.+|+++ |++++|+...+.++|.++||+.++.+.+..|.+..|++.+++.++...+.+++-|..+ .+
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~-----~~ 253 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTE-----MD 253 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccc-----cC
Confidence 88899999999765 7999999999999999999999999999999999999999998888666555443211 00
Q ss_pred hHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHH
Q 015136 211 TTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWML 290 (412)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 290 (412)
.++ .+ .-.++.++++.++..... .
T Consensus 254 ~~~---------------------------------~~-------------------~~~~~~~Ll~dP~I~~~a---g- 277 (464)
T KOG3764|consen 254 PDS---------------------------------TE-------------------QGTPMWSLLMDPYILLIA---G- 277 (464)
T ss_pred ccc---------------------------------cc-------------------cCccHHHHHhCchHhhhh---c-
Confidence 000 00 000333444443322111 1
Q ss_pred HHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhc--hhhHHHHHHHHH
Q 015136 291 FFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAG--RKLSLTIMLILV 368 (412)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g--rr~~l~~~~~~~ 368 (412)
...++..+..+..|.+. ..+.++...+.-+.++.+....+...++..+.|.+.||++ |......+.+..
T Consensus 278 --ai~~~n~~lafLePtls-------lwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~ 348 (464)
T KOG3764|consen 278 --AITFSNSSLAFLEPTLS-------LWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATV 348 (464)
T ss_pred --chhhccchHHHhCcccH-------HHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHH
Confidence 11112222223333222 1112233433347888999999999999999999999999 655556666666
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHh
Q 015136 369 FICILPLAMLQSNILITGLLVGARMFAF 396 (412)
Q Consensus 369 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 396 (412)
.++.....+.++...+++.....+++.+
T Consensus 349 G~~~~~iP~~~~~~~L~vp~~~l~~~i~ 376 (464)
T KOG3764|consen 349 GVSSGPIPFATSIAQLWVPNFGLGFGIG 376 (464)
T ss_pred HHHhchhHhhhhHHHHhhhhHHHHHHHH
Confidence 6666666665555544444444444333
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.88 E-value=3e-20 Score=175.90 Aligned_cols=162 Identities=17% Similarity=0.038 Sum_probs=131.3
Q ss_pred HHHHHHHHhhHHHhhhhhh-hhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh-hcchhHHHHHHHHHHHHHHHh
Q 015136 30 AGLAVFAEAMEIMILSFIG-PAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDN-YGRKKGFLGIAMITSGIGLLS 107 (412)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~~ 107 (412)
+++..+...+..+.+.... .++.+++|++.++.+++.+.+........+++|+++|| +|||+.++.+.++.+++..++
T Consensus 26 ~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~ 105 (500)
T PRK09584 26 IFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALV 105 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 3344445555544454444 45568999999999998888877767777899999999 599999999999999998888
Q ss_pred hcch-hHHHHHHHHHHHhhhcCcc-ccceeeeeecccccc--hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHH
Q 015136 108 AFSP-NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAK--RGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLAL 183 (412)
Q Consensus 108 ~~~~-~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~ 183 (412)
++++ +.+.+.++|++.|++.|.. +...+++.|++|+++ |..+.++++.+.++|..++|.+++++.++.|||+.|.+
T Consensus 106 ~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i 185 (500)
T PRK09584 106 AWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFAL 185 (500)
T ss_pred HHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 8764 4566778899999999987 777789999998643 45688899999999999999999999999999999998
Q ss_pred HHHHHHHH
Q 015136 184 SSIPSFAV 191 (412)
Q Consensus 184 ~~~~~~~~ 191 (412)
.++..++.
T Consensus 186 ~~i~~~i~ 193 (500)
T PRK09584 186 SVVGMLIT 193 (500)
T ss_pred HHHHHHHH
Confidence 87654443
No 98
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.87 E-value=8.1e-20 Score=168.85 Aligned_cols=274 Identities=14% Similarity=-0.017 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHH--HHHHHHHHHHHHHHHH-HHHhhhcchhHHHHHHHHH-HH
Q 015136 27 FAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLL--STVVFAGNLVGVYLWG-LLSDNYGRKKGFLGIAMIT-SG 102 (412)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~--~s~~~~~~~i~~~~~g-~l~dr~Grr~~~~~~~~~~-~i 102 (412)
...+...++.++...+...+..|.+.++.|.|.+++|++ .++..+...+.+|+.+ +..||+||||..++...+. ++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 445566678888888999999999999999999999997 4677888888888884 4799999999876555332 21
Q ss_pred HHHHhh---cchh-HHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 015136 103 IGLLSA---FSPN-YISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNW 177 (412)
Q Consensus 103 ~~~~~~---~~~~-~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 177 (412)
.....+ ...+ ...++...++.++..+.. +....+..|..++++++...+....+..+|..+++...+.+.++.||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 222222 2222 223334444455555555 66667778888888888888888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccc
Q 015136 178 RWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTS 257 (412)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (412)
|..|++.++..++..+..++.+|+++. +++.++.
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~---~~~~~~~------------------------------------------- 196 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVA---SPEAPLA------------------------------------------- 196 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcC---ccccchh-------------------------------------------
Confidence 999999988777665554555443210 0000000
Q ss_pred hhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHH
Q 015136 258 SRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLA 337 (412)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (412)
...+.+++++++..+......+... ........+.+.|.+| .|+++.+.+......
T Consensus 197 ----------~~~~~~~~l~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~l~~-----------~G~s~~~ig~~~~~~ 252 (390)
T TIGR02718 197 ----------RRASLFRFFRRPLAWSLLALALLSA---MTAVSGFGLSKLYLVD-----------AGWPLEWIGRLGMAG 252 (390)
T ss_pred ----------hHHHHHHHHcCcCHHHHHHHHHHHH---HHHHHHHHHhhHHHHh-----------cCCCHHHHHHHHhHH
Confidence 0002333444443333333333332 2223333344444433 468888989888776
Q ss_pred Hc-chhhHHHHHHHHHHhhchhhHHHHHHHHHHH
Q 015136 338 SL-GELPGLVLAGIIVDRAGRKLSLTIMLILVFI 370 (412)
Q Consensus 338 ~~-~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~ 370 (412)
++ ..+++.+++|++.||+|+|+.+..+..+.++
T Consensus 253 ~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 253 GAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGS 286 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 64 5677889999999999999998887766533
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.85 E-value=1.6e-18 Score=160.18 Aligned_cols=335 Identities=13% Similarity=0.100 Sum_probs=209.7
Q ss_pred HHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHh----hhcchhHHHHH-HHHHHHHHHH
Q 015136 32 LAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSD----NYGRKKGFLGI-AMITSGIGLL 106 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d----r~Grr~~~~~~-~~~~~i~~~~ 106 (412)
...+...+.........+.+.+++|.++.+.+++..+..+...+.+|+.|.++| |+||||.++++ ....+++..+
T Consensus 11 ~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~l 90 (477)
T TIGR01301 11 SVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVIL 90 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 334444555666667777788999999999999999999999999999999999 59999998875 6666666667
Q ss_pred hhcchhHH-----------------HHHHHHHHHhhhcCcc-ccceeeeeecccccch--hhHHHHHHHHHHHHHHHHHH
Q 015136 107 SAFSPNYI-----------------SLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKR--GMWMVIFSTFWTLGSIFEAA 166 (412)
Q Consensus 107 ~~~~~~~~-----------------~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~ 166 (412)
.+++++.+ .+.++-.+..++.... +...++++|..|+++| +.+.++.+...++|.++|+.
T Consensus 91 l~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~ 170 (477)
T TIGR01301 91 IGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYA 170 (477)
T ss_pred HHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76765542 2233333444566666 6677899999998865 68999999999999999999
Q ss_pred HHHHH--HhcC-------------ChHHHHHHHHHHHHHH-HHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCC
Q 015136 167 LAWIV--MITL-------------NWRWLLALSSIPSFAV-LLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLP 230 (412)
Q Consensus 167 ~~~~l--~~~~-------------~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (412)
++++. .+.+ +.|..|++.++..++. .+..+..+|.|.... ++..++
T Consensus 171 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~-~~~~~~----------------- 232 (477)
T TIGR01301 171 AGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGS-DDFINS----------------- 232 (477)
T ss_pred HHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCcc-ccchhh-----------------
Confidence 99875 2211 5688999888766665 445666788653110 000000
Q ss_pred CCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 015136 231 NGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSS 310 (412)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (412)
|.++..+. +. +...++ -++.+++-+ +.....+...++.-+.++.+.++.+.+..
T Consensus 233 ----------~~~~~~~~-~~----------~~~~~~---i~~~~~~mP--~~m~~l~~vqffsW~a~f~~~~y~T~~vg 286 (477)
T TIGR01301 233 ----------EAAPPSKH-GE----------EAFFGE---LFGAFKYLP--RPVWILLLVTCLNWIAWFPFILFDTDWMG 286 (477)
T ss_pred ----------hccccccc-ch----------hhhHHH---HHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 00000000 00 000000 122222211 23333444444444455555555554443
Q ss_pred cccccccccccccCCCCc--chHHHHHHHHcchhhHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHhhhh-------
Q 015136 311 TQSKCGTTLTVSQSMHDS--SLYLSVFLASLGELPGLVLAGIIVDRAGR-KLSLTIMLILVFICILPLAMLQS------- 380 (412)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~g~l~dr~gr-r~~l~~~~~~~~~~~~~l~~~~~------- 380 (412)
+.-..+.. ..+..+++. ...+......+...+.+++..++.+|+|+ |+...++.++.++++....+..+
T Consensus 287 ~~v~~~~~-~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~ 365 (477)
T TIGR01301 287 REVYGGSV-NQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRY 365 (477)
T ss_pred HHHcCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence 21100000 000011000 12334455566666777888899999984 67778888888888887775332
Q ss_pred --------------hHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 381 --------------NILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 381 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
.+..++...+.|+.....+.+.++++++..|
T Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~ 410 (477)
T TIGR01301 366 YDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSS 410 (477)
T ss_pred ccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcc
Confidence 2556677788899999999999999888765
No 100
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.84 E-value=3.3e-18 Score=158.72 Aligned_cols=168 Identities=14% Similarity=0.066 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHhhHHHhhhhhhhhh-hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-cchhHHHHHHHHHHHHH
Q 015136 27 FAYAGLAVFAEAMEIMILSFIGPAV-KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNY-GRKKGFLGIAMITSGIG 104 (412)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~ 104 (412)
+..++...+...+..+.+...+|.+ .+++|+++.+.+.+.+.+.....++.+++|+++||+ ||||+++++.++.+++.
T Consensus 11 l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ 90 (493)
T PRK15462 11 IYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGH 90 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHH
Confidence 3344444555555656566556655 567899999999999999999999999999999999 99999999999999998
Q ss_pred HHhhcch-hHHHHHHHHHHHhhhcCcc-ccceeeeeeccccc--chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHH
Q 015136 105 LLSAFSP-NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAA--KRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWL 180 (412)
Q Consensus 105 ~~~~~~~-~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~ 180 (412)
++.+..+ +...+.+...+.++|.|.. +...++++|.+|++ +|..+.++.....++|..++|.+.+++.++.|||+.
T Consensus 91 lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~ 170 (493)
T PRK15462 91 VVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMG 170 (493)
T ss_pred HHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHH
Confidence 7666543 2233444455556667776 76778899999875 799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 015136 181 LALSSIPSFAVLLL 194 (412)
Q Consensus 181 ~~~~~~~~~~~~~~ 194 (412)
|.+.++..++.++.
T Consensus 171 F~iaaigm~l~li~ 184 (493)
T PRK15462 171 FGLAAVGMIAGLVI 184 (493)
T ss_pred HHHHHHHHHHHHHH
Confidence 99877644444433
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.82 E-value=6.4e-18 Score=158.75 Aligned_cols=296 Identities=13% Similarity=0.098 Sum_probs=185.5
Q ss_pred hhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh----hcchh-HHHHHHHHHHHHHHHhhcchh------HH
Q 015136 46 FIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDN----YGRKK-GFLGIAMITSGIGLLSAFSPN------YI 114 (412)
Q Consensus 46 ~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~-~~~~~~~~~~i~~~~~~~~~~------~~ 114 (412)
.....+.+++|+|+.++|.+.++..+..++..|+.|.++|| +|||| .++.+.+..+++.++....++ ..
T Consensus 31 ~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~ 110 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKII 110 (444)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 45567778899999999999999999999999999999998 78755 455677777777665544432 44
Q ss_pred HHHHHHHHHhhhcCcc-ccceeeeeecc-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-------cCChHHHHHHHH
Q 015136 115 SLVTLRGLVGIGIGSG-PVFSAWFLEFV-PAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI-------TLNWRWLLALSS 185 (412)
Q Consensus 115 ~~~~~r~l~G~~~g~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~w~~~~~~~~ 185 (412)
.+++..++.+.+.... ..-.++.+|+. ++++|.+..++......+|..+++.+...+.. ..+|+..+.+.+
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ 190 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMG 190 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 5555666666666555 45557888887 56789998888888888888877765544432 246888887777
Q ss_pred HHHHHHHHH-HHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhh
Q 015136 186 IPSFAVLLL-YSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITK 264 (412)
Q Consensus 186 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (412)
++.++..+. .+..+|.++.. +++..
T Consensus 191 ii~~v~~~~~~~~~~e~~~~~--~~~~~---------------------------------------------------- 216 (444)
T PRK09669 191 LLGVVLFFCCFFMTKERYTPE--VDNSS---------------------------------------------------- 216 (444)
T ss_pred HHHHHHHHHHhCCeEEecCCC--CcCCC----------------------------------------------------
Confidence 666555333 33334321100 00000
Q ss_pred hcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhH
Q 015136 265 LKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPG 344 (412)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 344 (412)
+..++++.+++++.++......+..........+. ...|.+.. .+ ++...+.......+..+++
T Consensus 217 --~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~---~~y~~~~~----------~~-~~~~~~~~~~~~~i~~ii~ 280 (444)
T PRK09669 217 --SVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGA---TLYYVNYV----------LL-RPDLATLFLVTGMIAGLFG 280 (444)
T ss_pred --CHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhh---hheeeeee----------cC-CHHHHHHHHHHHHHHHHHH
Confidence 00014445555554444433333222111111111 12222111 11 1223334444556777888
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh--hhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 345 LVLAGIIVDRAGRKLSLTIMLILVFICILPLAM--LQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 345 ~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
.++.+++.||+|+|+.+..+.++.+++.+.+.+ ..+.+...+..++.+++.+...+..+++.+|+.+
T Consensus 281 ~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d 349 (444)
T PRK09669 281 ALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVD 349 (444)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 899999999999999998887766554443333 2344445666677888888888999999988764
No 102
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.81 E-value=9e-19 Score=163.69 Aligned_cols=297 Identities=21% Similarity=0.197 Sum_probs=209.3
Q ss_pred hhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHh----hhcchhHHH-HHHHHHHHHHHHhhcc-h-------h
Q 015136 46 FIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSD----NYGRKKGFL-GIAMITSGIGLLSAFS-P-------N 112 (412)
Q Consensus 46 ~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d----r~Grr~~~~-~~~~~~~i~~~~~~~~-~-------~ 112 (412)
...+.+.+..|+++...|.+..+..+..++..|+.|.++| |+||||..+ +|....+++.+++... + .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 4556777888999999999999999999999999999999 899877554 6888888888777655 3 2
Q ss_pred HHHHHHHHHHHhhhcCcc-ccceeeeeeccc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-------ChHHHHHH
Q 015136 113 YISLVTLRGLVGIGIGSG-PVFSAWFLEFVP-AAKRGMWMVIFSTFWTLGSIFEAALAWIVMITL-------NWRWLLAL 183 (412)
Q Consensus 113 ~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-------~w~~~~~~ 183 (412)
...+.+..++..++.... ....++..|..+ +++|.+..+.-..+..+|.++...+.+.+.+.. +|++...+
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 233466666778888877 666789999997 578999999998888888876666666655322 58888888
Q ss_pred HHHHHHHHHH-HHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhh
Q 015136 184 SSIPSFAVLL-LYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRI 262 (412)
Q Consensus 184 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (412)
.+++.++..+ ..+..+|+++. .++++
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~----~~~~~------------------------------------------------- 209 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVE----VTEQE------------------------------------------------- 209 (428)
T ss_pred HHHHHHHHhhhhhheeeecccc----ccccc-------------------------------------------------
Confidence 8877776644 44555661110 00000
Q ss_pred hhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHH-HHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcch
Q 015136 263 TKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYY-GIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGE 341 (412)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (412)
+..+-.+.++.+++++..+......+.......... ...++..... |.+ ...+.......++.
T Consensus 210 -~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl--------------~~~-~~~~~~~~~~~~~~ 273 (428)
T PF13347_consen 210 -KKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVL--------------GNE-GLISIFMLIFFVAS 273 (428)
T ss_pred -cccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHh--------------cCc-hhhHHHHHHHHHHH
Confidence 000011145556665554444444333322211111 1122222211 222 45566677788889
Q ss_pred hhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 342 LPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQ--SNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 342 ~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
+++.++.++++||+|+|+.+..+..+.+++.+.+.+.. +.+...+..++.+++.+..+...+++.+|+.+
T Consensus 274 ~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id 345 (428)
T PF13347_consen 274 IVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVID 345 (428)
T ss_pred HHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchh
Confidence 99999999999999999999999999999998888765 77788888889999999999999999998764
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.80 E-value=1.7e-18 Score=162.58 Aligned_cols=335 Identities=13% Similarity=0.063 Sum_probs=207.6
Q ss_pred HHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc-----chhHHHHHHHH
Q 015136 25 LVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYG-----RKKGFLGIAMI 99 (412)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-----rr~~~~~~~~~ 99 (412)
..+.++...++..+..........+.+.+++|+|+++++...++..+...+-.+ +|+++||++ ||+.++++.++
T Consensus 26 ~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred hHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH
Confidence 444555556777777744444566777778999999999999999999999555 999999998 77777888777
Q ss_pred HH-HHHHHhhcchhHHHHH-HHHHHHhhhcCcc-ccceeeeeecccccchhhH---HHHHHHHHHHHHHHHHHHHHHHHh
Q 015136 100 TS-GIGLLSAFSPNYISLV-TLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMW---MVIFSTFWTLGSIFEAALAWIVMI 173 (412)
Q Consensus 100 ~~-i~~~~~~~~~~~~~~~-~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~---~~~~~~~~~~g~~~~~~~~~~l~~ 173 (412)
.. ++....+..++..... +..++.+++.+.. .+.-++..|..+ +++... .+......++|.++++.+++.+.+
T Consensus 105 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~ 183 (468)
T TIGR00788 105 GSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLD 183 (468)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 63 4444444445544444 4788999998888 888899999988 555443 333344455899999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCC
Q 015136 174 TLNWRWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTP 253 (412)
Q Consensus 174 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (412)
.++||..|++.+...++..+...+++|++.....+.++++.... ...
T Consensus 184 ~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~-~~~-------------------------------- 230 (468)
T TIGR00788 184 KTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNM-ALL-------------------------------- 230 (468)
T ss_pred hcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhh-hhh--------------------------------
Confidence 99999999998877776655567777753110000000000000 000
Q ss_pred cccchhhhhhhhcccccchhhccchhhHHHHHHHHHH-HHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHH
Q 015136 254 LLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWML-FFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYL 332 (412)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (412)
.....+..++...+....++++..+..++..+. +. .......+.+. ......|.++...|.
T Consensus 231 ----~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~------~~~~~~~~~f~--------~~~~~lG~s~~~~G~ 292 (468)
T TIGR00788 231 ----TLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYA------NLPGASGSVFC--------ATTQCLPGGPSFSGM 292 (468)
T ss_pred ----hhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHh------hcCCCCceeEE--------EEcccCCCCcchhhh
Confidence 000000000001122222333222222211111 11 00000001000 111246899999999
Q ss_pred HHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhh----------hhhHHHHHHHHHHHHHHhhHhHHH
Q 015136 333 SVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAML----------QSNILITGLLVGARMFAFGAFTIA 402 (412)
Q Consensus 333 ~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 402 (412)
.....+++.+++....+++.+|++.|+++.++.++.+++.+..... ++.+......++.+++.+..+...
T Consensus 293 ~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~ 372 (468)
T TIGR00788 293 SKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPF 372 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccH
Confidence 9999999999999999999999999999999998888877554310 222233344455555555556666
Q ss_pred HhhccCCCCC
Q 015136 403 CIFTPEQLGW 412 (412)
Q Consensus 403 ~~~~~e~~P~ 412 (412)
..++.+..|+
T Consensus 373 ~~~~~~~~p~ 382 (468)
T TIGR00788 373 LVLLARLCPS 382 (468)
T ss_pred HHHHHHhCCC
Confidence 7777766663
No 104
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.80 E-value=1.4e-17 Score=157.46 Aligned_cols=309 Identities=12% Similarity=0.018 Sum_probs=186.4
Q ss_pred hhHHHhhhh-hhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHh----hhcc-hhHHHHHHHHHHHHHHHhhcch
Q 015136 38 AMEIMILSF-IGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSD----NYGR-KKGFLGIAMITSGIGLLSAFSP 111 (412)
Q Consensus 38 ~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d----r~Gr-r~~~~~~~~~~~i~~~~~~~~~ 111 (412)
.......+. ....+.+.+|+++..+|.+..+.-+..++..|+.|.++| |+|| |+.++++....+++.+++...+
T Consensus 19 ~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p 98 (473)
T PRK10429 19 DFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAH 98 (473)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCC
Confidence 333344444 445556677999999999999999999999999999999 6699 5556668777777766554432
Q ss_pred h------HHHHHHHHHHHhhhcCcc-ccceeeeeecc-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-------CC
Q 015136 112 N------YISLVTLRGLVGIGIGSG-PVFSAWFLEFV-PAAKRGMWMVIFSTFWTLGSIFEAALAWIVMIT-------LN 176 (412)
Q Consensus 112 ~------~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-------~~ 176 (412)
+ +..+++..++.+++.... ....++..|.. ++++|.+..++-..+.++|..+.+.+...+.+. .+
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g 178 (473)
T PRK10429 99 LFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFG 178 (473)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhh
Confidence 1 334455566667777776 56667888988 588999999987777777766665554443221 24
Q ss_pred hHHHHHHHHHHHHHHH-HHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcc
Q 015136 177 WRWLLALSSIPSFAVL-LLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLL 255 (412)
Q Consensus 177 w~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (412)
|+....+.+++.++.. +..+..+|.+.....+.++ +++ .
T Consensus 179 ~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~--------------------------------------~~~--~ 218 (473)
T PRK10429 179 FQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAE--------------------------------------GSH--L 218 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCceecCCcccccccc--------------------------------------ccC--C
Confidence 6666666655544433 3333345432100000000 000 0
Q ss_pred cchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHH
Q 015136 256 TSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVF 335 (412)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (412)
+ -...++.+++++.++..... .+......+....+.+.+.+.. ..+....+....
T Consensus 219 ~-----------~~~~~~~~~~n~~~~~ll~~---~~~~~~~~~~~~~~~~y~~~y~-----------~~~~~~~~~~~~ 273 (473)
T PRK10429 219 T-----------LKDIVALIYKNDQLSCLLGM---ALAYNIASNIINGFAIYYFTYV-----------IGDADLFPYYLS 273 (473)
T ss_pred C-----------HHHHHHHHhcCHHHHHHHHH---HHHHHHHHHHHhhheeeEEEEE-----------CCCHHHHHHHHH
Confidence 0 00023333344333332222 2222233333333334333221 123344555666
Q ss_pred HHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh-----hhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCC
Q 015136 336 LASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAM-----LQSNILITGLLVGARMFAFGAFTIACIFTPEQL 410 (412)
Q Consensus 336 ~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 410 (412)
...++.+++.++.+++.||+|+|+.+.++..+..++.+.+.. ..+.+...+..++.+++.+..++..+++.+|+.
T Consensus 274 ~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~i 353 (473)
T PRK10429 274 YAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTV 353 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 666888999999999999999999998888766655544432 223344455566677778888888888888875
Q ss_pred C
Q 015136 411 G 411 (412)
Q Consensus 411 P 411 (412)
+
T Consensus 354 d 354 (473)
T PRK10429 354 D 354 (473)
T ss_pred h
Confidence 4
No 105
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.78 E-value=1.2e-17 Score=158.71 Aligned_cols=184 Identities=15% Similarity=0.029 Sum_probs=138.9
Q ss_pred hHHHhhhhhhhhhh-hhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH---hhcchhHH
Q 015136 39 MEIMILSFIGPAVK-SEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLL---SAFSPNYI 114 (412)
Q Consensus 39 ~~~~~~~~~~~~~~-~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~---~~~~~~~~ 114 (412)
...+......|.+. +++|.+..+.++..+...++..++.++.|+++||+|||+.++.+.++..++.+. ...+++..
T Consensus 264 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIG 343 (490)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 34444455566655 668998888888888899999999999999999999999988887654433322 22345677
Q ss_pred HHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHH
Q 015136 115 SLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITL-NWRWLLALSSIPSFAVL 192 (412)
Q Consensus 115 ~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~w~~~~~~~~~~~~~~~ 192 (412)
.+++++++.|++.+.. .....++.|.+|++.|++++++......++..++|.+.+++.+.. +|+..+++..++.++.+
T Consensus 344 ~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~ 423 (490)
T PRK10642 344 LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGL 423 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 7788899888876655 555667779999999999999855555666778899998888754 47877776666666666
Q ss_pred HHHHhccCCchhhhhc-----CChHHHHHHHHHHH
Q 015136 193 LLYSLAPESPRYLNVK-----GRTTEARNILDKIA 222 (412)
Q Consensus 193 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 222 (412)
+..+++||+|+++.++ ++.+|+++.+.+++
T Consensus 424 ~~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 424 ITGVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 6677789999987654 77788888877765
No 106
>PRK11462 putative transporter; Provisional
Probab=99.76 E-value=9.4e-16 Score=144.04 Aligned_cols=293 Identities=13% Similarity=0.064 Sum_probs=179.3
Q ss_pred hhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh----hcchhHHH-HHHHHHHHHHHHhhcchh------HH
Q 015136 46 FIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDN----YGRKKGFL-GIAMITSGIGLLSAFSPN------YI 114 (412)
Q Consensus 46 ~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~~~~-~~~~~~~i~~~~~~~~~~------~~ 114 (412)
.....+.+..|+++..+|.+..+.-+.-++.-|+.|.++|| +||||..+ ++.+..+++.+++...++ ..
T Consensus 31 ~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~ 110 (460)
T PRK11462 31 YMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMI 110 (460)
T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 34455667789999999999999999999999999999995 79876555 566777777766654432 33
Q ss_pred HHHHHHHHHhhhcCcc-ccceeeeeeccc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-------ChHHHHHHHH
Q 015136 115 SLVTLRGLVGIGIGSG-PVFSAWFLEFVP-AAKRGMWMVIFSTFWTLGSIFEAALAWIVMITL-------NWRWLLALSS 185 (412)
Q Consensus 115 ~~~~~r~l~G~~~g~~-~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-------~w~~~~~~~~ 185 (412)
.+.+..++..++.... ..-.++..|..+ +++|.+..++...+..+|..+++.+...+.+.. +|+....+.+
T Consensus 111 y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ 190 (460)
T PRK11462 111 YAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLS 190 (460)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 4555566667777776 555578888876 789999999999999999888877766554432 5777766666
Q ss_pred HHHHHHHHH-HHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhh
Q 015136 186 IPSFAVLLL-YSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITK 264 (412)
Q Consensus 186 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (412)
++.++.... ....+|.++.. +++ ...
T Consensus 191 ii~~i~~~i~~~~~kE~~~~~--~~~-~~~-------------------------------------------------- 217 (460)
T PRK11462 191 VVAFMMLAFCFFTTKERVEAP--PTT-TSM-------------------------------------------------- 217 (460)
T ss_pred HHHHHHHHHHHhcceeccCCC--ccC-CCH--------------------------------------------------
Confidence 655554333 33334432100 000 000
Q ss_pred hcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhH
Q 015136 265 LKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPG 344 (412)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 344 (412)
.+.++..++++.++......+..........+...+...|. .+. +...+.......+.++++
T Consensus 218 ----~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~-------------~g~-~~~~~~~l~~~~i~~iig 279 (460)
T PRK11462 218 ----REDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI-------------LGT-PEVFVAFLTTYCVGNLIG 279 (460)
T ss_pred ----HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh-------------cCC-hHHHHHHHHHHHHHHHHH
Confidence 00333444444444443333333332233333333333332 122 223345566777888899
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHHhhHhHHHHhhccCC
Q 015136 345 LVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQS--NILITGLLVGARMFAFGAFTIACIFTPEQ 409 (412)
Q Consensus 345 ~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 409 (412)
.++++++.||+++|+....+..+..+..+++.+.+. .....+..++.+++.+...+..+++.+|.
T Consensus 280 ~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~ 346 (460)
T PRK11462 280 SALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDT 346 (460)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999998876555444443333333222 22333344555666555566666666664
No 107
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.75 E-value=6.4e-16 Score=141.21 Aligned_cols=311 Identities=17% Similarity=0.130 Sum_probs=202.6
Q ss_pred HHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc-chhHHHHHHHHHHHHHHHhhcchh
Q 015136 34 VFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYG-RKKGFLGIAMITSGIGLLSAFSPN 112 (412)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-rr~~~~~~~~~~~i~~~~~~~~~~ 112 (412)
++...+....+.+..+.+.++.|.|.+|+|.+.+...+...++++++|.++||.+ +|+.+.+..++.++........++
T Consensus 11 ~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~ 90 (400)
T PF03825_consen 11 YFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSS 90 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4455555666778889999999999999999999999999999999999999986 577777777777777777777888
Q ss_pred HHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHH-HHHHHhcCC---hHHHHHHHHHH
Q 015136 113 YISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAAL-AWIVMITLN---WRWLLALSSIP 187 (412)
Q Consensus 113 ~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~-~~~l~~~~~---w~~~~~~~~~~ 187 (412)
++.+++..++..+..... |...++..+... +++.-.|-.....++|..++... +..+....+ ....+++.+..
T Consensus 91 f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 168 (400)
T PF03825_consen 91 FWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAIL 168 (400)
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHH
Confidence 888888777777776665 666565555543 33344455555666666665443 222322222 23445555555
Q ss_pred HHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcc
Q 015136 188 SFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKS 267 (412)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (412)
.++.....+.+|+.|.....+++.+ + .
T Consensus 169 ~~ll~~~~l~lp~~~~~~~~~~~~~---~--------------------------------------------------~ 195 (400)
T PF03825_consen 169 SLLLAGFALFLPKTPPKRSAKESVK---K--------------------------------------------------L 195 (400)
T ss_pred HHHHHHHHHhCCCCccccccCCCcc---c--------------------------------------------------c
Confidence 5444444556777652100000000 0 0
Q ss_pred cccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHH
Q 015136 268 GFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVL 347 (412)
Q Consensus 268 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 347 (412)
...+..++++++....+++...........+| .+.+.|.++.+ |.+....+.......+..++.-..
T Consensus 196 ~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~---~f~~~yl~~~g----------g~~~~~~g~~~~l~~~aEi~~f~~ 262 (400)
T PF03825_consen 196 LGLDALKLLKNPRFLVFLLAAFLIGISHAAYY---TFFSIYLQELG----------GYSGSTIGILWALGVVAEIPFFFF 262 (400)
T ss_pred cchHHHHHhcCccHHHHHHHHHHHHHHHHHHH---HHHHHHHHHcc----------cchhhHHHHHHHHHHHHHHHHHHH
Confidence 00022334444444433333333332222233 33444443332 255666777777888899999999
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHhh-hhhHHHHHHHH----HHHHHHhhHhHHHHhhccCCCCC
Q 015136 348 AGIIVDRAGRKLSLTIMLILVFICILPLAML-QSNILITGLLV----GARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 348 ~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
.+++..|+|.++++.++.+..++=..++... ++.+....... +-|...+..+.....|+.|..|+
T Consensus 263 ~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~ 332 (400)
T PF03825_consen 263 SGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPP 332 (400)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999999999988876 44444333333 46777788888888888888874
No 108
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.75 E-value=1.5e-16 Score=140.25 Aligned_cols=327 Identities=16% Similarity=0.123 Sum_probs=228.2
Q ss_pred CCCccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHH
Q 015136 18 GFGKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIA 97 (412)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~ 97 (412)
+..++||.+++..++..+.+++.+..+++.......-|| +.+..-|.+.+|++.+....+++-|+.||+|-|...+++.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 356789999999999999999999999998888888899 8888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcc------hhHH--HHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHH
Q 015136 98 MITSGIGLLSAFS------PNYI--SLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALA 168 (412)
Q Consensus 98 ~~~~i~~~~~~~~------~~~~--~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 168 (412)
.+.+++..+-..+ +.++ ....+..+.+.++-.. ........-|+|+++|..+..+-.++..+|.+++.++.
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcc
Confidence 9999999876554 2344 5667888888887777 44445666789999999999999999999999999998
Q ss_pred HHHHhcC------ChHH--HHHHHHHHHHHHH-HHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccC
Q 015136 169 WIVMITL------NWRW--LLALSSIPSFAVL-LLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDAT 239 (412)
Q Consensus 169 ~~l~~~~------~w~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (412)
..+..+- .|.. .|+....+..+.+ ...+..++.|+...+..+..+. +
T Consensus 197 pilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~-----~------------------- 252 (480)
T KOG2563|consen 197 PILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ-----D------------------- 252 (480)
T ss_pred ceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh-----c-------------------
Confidence 8887543 3654 3444444333333 3334445544321111100000 0
Q ss_pred CCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccc
Q 015136 240 SRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTL 319 (412)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (412)
.+-.++.+++++.+ .+.+..+.+......+++....+..-.
T Consensus 253 --------------------------~~f~~si~~~~~n~---~F~il~~~ygi~~g~F~~l~~~l~~~l---------- 293 (480)
T KOG2563|consen 253 --------------------------ASFPKSIKSCFKNR---QFIILAICYGIGLGLFNSLSTLLNLAL---------- 293 (480)
T ss_pred --------------------------CcHHHHHHHHHcCc---cHHHHHHHHhhhHHHHHHHHHHhhhcc----------
Confidence 00001444455443 445555666666666666665555222
Q ss_pred ccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHH-h---hhhhHHHHHHHHHHHHH
Q 015136 320 TVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGR-KLSLTIMLILVFICILPLA-M---LQSNILITGLLVGARMF 394 (412)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr-r~~l~~~~~~~~~~~~~l~-~---~~~~~~~~~~~~~~~~~ 394 (412)
...|++...+|.......+++++++++.|.+.||.+. |...++......++...+. . ....+.......+.|++
T Consensus 294 -~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~ 372 (480)
T KOG2563|consen 294 -CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFF 372 (480)
T ss_pred -ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHh
Confidence 1235666888999999999999999999999999874 4444444444444422222 2 22334555667777888
Q ss_pred HhhHhHHHHhhccCC
Q 015136 395 AFGAFTIACIFTPEQ 409 (412)
Q Consensus 395 ~~~~~~~~~~~~~e~ 409 (412)
..+.+|+..-+..|.
T Consensus 373 ~~~~~Pig~ElgvE~ 387 (480)
T KOG2563|consen 373 GTGYLPIGFELGVET 387 (480)
T ss_pred hcCCCCcceeeeeee
Confidence 888888776666554
No 109
>PRK09848 glucuronide transporter; Provisional
Probab=99.74 E-value=1.8e-15 Score=142.41 Aligned_cols=296 Identities=11% Similarity=-0.005 Sum_probs=168.6
Q ss_pred hhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh----cchhHH-HHHHHHHHHHHHHh-hc----chh--H
Q 015136 46 FIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNY----GRKKGF-LGIAMITSGIGLLS-AF----SPN--Y 113 (412)
Q Consensus 46 ~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~----Grr~~~-~~~~~~~~i~~~~~-~~----~~~--~ 113 (412)
...+++.+..|+++.++|.+.+...+..++..++.|+++||. ||||.. +++.+...+..++. .. .++ .
T Consensus 30 ~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (448)
T PRK09848 30 FLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKV 109 (448)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHH
Confidence 344567777899999999999999999999999999999996 777755 55555555444432 21 111 2
Q ss_pred HHHHHHHHHHhhhcCcc-ccceeeeeeccc-ccchhhHHHHHHHHHH-----HHHHHHHHHHHHHHhcC--ChHHHHHHH
Q 015136 114 ISLVTLRGLVGIGIGSG-PVFSAWFLEFVP-AAKRGMWMVIFSTFWT-----LGSIFEAALAWIVMITL--NWRWLLALS 184 (412)
Q Consensus 114 ~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~-~~~r~~~~~~~~~~~~-----~g~~~~~~~~~~l~~~~--~w~~~~~~~ 184 (412)
...++...+.+++.+.. +...++..|... +++|.+..++-..+.+ ++..++|.+.....+.. +|.....+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~ 189 (448)
T PRK09848 110 VYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVL 189 (448)
T ss_pred HHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 23344556677777776 555566666554 4678887666554433 44445555544321111 122111222
Q ss_pred HHHHHHHH-HHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhh
Q 015136 185 SIPSFAVL-LLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRIT 263 (412)
Q Consensus 185 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (412)
+++.++.. +.....+|+++. +.++..
T Consensus 190 ~v~~~~~~~~~~~~~~e~~~~---~~~~~~-------------------------------------------------- 216 (448)
T PRK09848 190 AIAGMVLYFICFKSTRENVVR---IVAQPS-------------------------------------------------- 216 (448)
T ss_pred HHHHHHHHHHHHcCcEeccCC---CccCCC--------------------------------------------------
Confidence 22222221 222223333110 000000
Q ss_pred hhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhh
Q 015136 264 KLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELP 343 (412)
Q Consensus 264 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (412)
....++.+++++........ .++....+.......+.+.++. .|.++...++......++.++
T Consensus 217 ----~~~~~~~l~~n~~f~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~ 279 (448)
T PRK09848 217 ----LKISLQTLKRNRPLFMLCIG---ALCVLISTFAVSASSLFYVRYV----------LNDTGLFTVLVLVQNLVGTVA 279 (448)
T ss_pred ----HHHHHHHHhCCchHHHHHHH---HHHHHHHHHHHhhhheeeEeee----------cCChHHHHHHHHHHHHHHHHH
Confidence 00034445554443333222 2222333333334455444332 345444444444444566788
Q ss_pred HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 344 GLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQ--SNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 344 g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
+.++.+++.||+|+|+.+.++.++.+++.+.+.+.+ +.+...+..++.+++.+...+...+..+|..|
T Consensus 280 ~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~ 349 (448)
T PRK09848 280 SAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVE 349 (448)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 899999999999999999999988888777666533 33444455666777778888888888777654
No 110
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.73 E-value=4.9e-15 Score=134.32 Aligned_cols=311 Identities=20% Similarity=0.169 Sum_probs=210.4
Q ss_pred HHHhhHHHhhhhhh-hhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh----hcchh-HHHHHHHHHHHHHHHhh
Q 015136 35 FAEAMEIMILSFIG-PAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDN----YGRKK-GFLGIAMITSGIGLLSA 108 (412)
Q Consensus 35 ~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~-~~~~~~~~~~i~~~~~~ 108 (412)
+............+ -.+.+.+|+++..+|.+..+.=+.-++.-|+.|.+.|| +|||| -++++.+-.++...++.
T Consensus 22 ~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F 101 (467)
T COG2211 22 FASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLF 101 (467)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHH
Confidence 33333333333333 45567789999999999999999999999999999994 78765 45567788888888777
Q ss_pred cchh------HHHHHHHHHHHhhhcCcc-ccceeeeeeccc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-------
Q 015136 109 FSPN------YISLVTLRGLVGIGIGSG-PVFSAWFLEFVP-AAKRGMWMVIFSTFWTLGSIFEAALAWIVMI------- 173 (412)
Q Consensus 109 ~~~~------~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~------- 173 (412)
.+++ ....++...+.+++.... ..-.++..|..+ +++|.+..++-..+.++|..+...+...+.+
T Consensus 102 ~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~ 181 (467)
T COG2211 102 ITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDK 181 (467)
T ss_pred cCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 6653 445666788889998887 555688888875 6889999999999999997777666666543
Q ss_pred cCChHHHHHHHHHHHHHHHH-HHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCC
Q 015136 174 TLNWRWLLALSSIPSFAVLL-LYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNT 252 (412)
Q Consensus 174 ~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (412)
..||+....+.+++.++..+ +++-.+|.+.. +++.++ .
T Consensus 182 ~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~---~~~~~~--------------------------------------~ 220 (467)
T COG2211 182 ALGYQGTALVLGVIGVILLLFCFFNVKERVVE---TQPTKT--------------------------------------G 220 (467)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhcccCc---cccCcc--------------------------------------c
Confidence 34788888887777766643 44445554320 000000 0
Q ss_pred CcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHH
Q 015136 253 PLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYL 332 (412)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (412)
.. +.-..++..+++.+.++..++..++..+......+...+...|. .|.+......
T Consensus 221 ~~-----------~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~-------------lg~~~l~~~~ 276 (467)
T COG2211 221 VK-----------LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYV-------------LGDPELFAYL 276 (467)
T ss_pred cc-----------ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEE-------------cCChHHHHHH
Confidence 00 00000233444544444444433333322222222222222222 3566667777
Q ss_pred HHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHhhHhHHHHhhccCCC
Q 015136 333 SVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQ--SNILITGLLVGARMFAFGAFTIACIFTPEQL 410 (412)
Q Consensus 333 ~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 410 (412)
.......+.+++.++..++.+|+|+|+++.++.++.+++.+++.+.+ +....++..++.+++.+...++.+++++|..
T Consensus 277 ~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~v 356 (467)
T COG2211 277 LLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTV 356 (467)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchh
Confidence 77777788888899999999999999999999999999999998855 4455556667888888889999999999864
No 111
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.73 E-value=3.5e-16 Score=138.93 Aligned_cols=236 Identities=9% Similarity=0.061 Sum_probs=167.7
Q ss_pred cchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-------------
Q 015136 109 FSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMIT------------- 174 (412)
Q Consensus 109 ~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------------- 174 (412)
...+++.++++-++.|.|.+.. +...+++++..++|++++.+++.+.+.++|..++|.+++.+...
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4578999999999999999998 99999999999999999999999999999999999999988732
Q ss_pred ---CChHHHHHHHHHHHHHHHHHHHhc--cCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCC
Q 015136 175 ---LNWRWLLALSSIPSFAVLLLYSLA--PESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPP 249 (412)
Q Consensus 175 ---~~w~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (412)
..|+++|++.+.+.++..+.+.+. ||.++ ++++ +. .+++.
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~--~~--------------------------~~~~~- 130 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVA--RV--------------------------SSGDT- 130 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------cccc--cc--------------------------ccccc-
Confidence 369999997766555444444343 33210 0000 00 00000
Q ss_pred CCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcc
Q 015136 250 DNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSS 329 (412)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (412)
. +.+..++ .+..++..+..++......+...|.+.|..+. +..|.++.+
T Consensus 131 ~--------------------~~~~~~~---~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~--------~~~g~s~~~ 179 (310)
T TIGR01272 131 T--------------------QKTSAFQ---FTHLVLGALGIFVYVGAEVSAGSFLVNFLSDP--------HALGLPEDQ 179 (310)
T ss_pred c--------------------chhhHHh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------ccCCCCHHH
Confidence 0 0001112 23334445555555556667777788777432 124788999
Q ss_pred hHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCC
Q 015136 330 LYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQ 409 (412)
Q Consensus 330 ~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 409 (412)
.+...+....+.++|+++++++.||+|+|+.+.++..+..++.+++...++.. .....++.+++.+..+|...+...+.
T Consensus 180 a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~ 258 (310)
T TIGR01272 180 AAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYV-AMWFVLALGLFNSIMFPTIFSLALNA 258 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999988888877777765555443332 33455578888999999988887776
Q ss_pred CC
Q 015136 410 LG 411 (412)
Q Consensus 410 ~P 411 (412)
+|
T Consensus 259 ~~ 260 (310)
T TIGR01272 259 LG 260 (310)
T ss_pred hh
Confidence 65
No 112
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.73 E-value=3.9e-16 Score=139.98 Aligned_cols=316 Identities=17% Similarity=0.117 Sum_probs=180.7
Q ss_pred HHHHhhHHHhhhhhhhhhhh-hcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHH--HHHHH-Hhhc
Q 015136 34 VFAEAMEIMILSFIGPAVKS-EWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMIT--SGIGL-LSAF 109 (412)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~--~i~~~-~~~~ 109 (412)
.+...+...+.-+..+...+ +.|+|.+++|.+.++..+...+.+|+.|.++||+|.||-++...... ..+.. ...+
T Consensus 16 ~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~ 95 (412)
T PF01306_consen 16 YFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVF 95 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455666666776665 48999999999999999999999999999999999777555443322 22222 2222
Q ss_pred chhH-HHHHHHHHHHhhhcCc----c-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHH
Q 015136 110 SPNY-ISLVTLRGLVGIGIGS----G-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLAL 183 (412)
Q Consensus 110 ~~~~-~~~~~~r~l~G~~~g~----~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~ 183 (412)
.+-. ..+.++-.+.|+..+. . ++.-+++.+.. ++.+.-.|-.....++|.+++..++|.+.+ .+-+..|++
T Consensus 96 ~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi 172 (412)
T PF01306_consen 96 GPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWI 172 (412)
T ss_dssp HHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHH
Confidence 2211 1122333333443333 2 33333332222 344556677888999999999999999887 345667776
Q ss_pred HHHHHHHHHHHHHhc-cCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhh
Q 015136 184 SSIPSFAVLLLYSLA-PESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRI 262 (412)
Q Consensus 184 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (412)
....+++..++.++. |+.++.....+..+ .
T Consensus 173 ~s~~~~il~lll~~~~~~~~~~~~~~~~~~-----------------------------------~-------------- 203 (412)
T PF01306_consen 173 ASAAAIILLLLLLLLKPDVPPQAEVADALG-----------------------------------A-------------- 203 (412)
T ss_dssp HHHHHHHHHHHHHSS---SSSSS-SSTTSS-----------------------------------S--------------
T ss_pred HHHHHHHHHHHHHHcCCcCchhhhhhcccc-----------------------------------c--------------
Confidence 665555444433333 33221100000000 0
Q ss_pred hhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchh
Q 015136 263 TKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGEL 342 (412)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (412)
++.+.+.++..++++.+..+.+.+. ..+....|+......+.|.+... ++.+.+....|...+...+.++
T Consensus 204 ~~~~~~~~~~~~l~k~~~fw~~~l~---v~g~~~~Y~vfdqqf~~y~~~~f-------~~~~~g~~~~G~l~s~~v~~E~ 273 (412)
T PF01306_consen 204 KKDKVSLKDVLSLFKMRNFWFFVLF---VIGVAAIYDVFDQQFPIYFASFF-------QSAGQGNQMYGYLWSVQVFLEA 273 (412)
T ss_dssp ------HHHHHHHTTSHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTS-------SSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHhcchhHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHh-------cccccChhHHhHHHHHHHHHHH
Confidence 0000011244455555444433332 22222333333222333322111 1223455668888999999999
Q ss_pred hHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 343 PGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 343 ~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
+...+..++.+|+|.|+.++++..++++=..+..+.++.+.+...=.+-++-.........-|+++.+|
T Consensus 274 ~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd 342 (412)
T PF01306_consen 274 LMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFD 342 (412)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999998888877776666666655555555555555544
No 113
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.72 E-value=3e-14 Score=132.76 Aligned_cols=293 Identities=18% Similarity=0.170 Sum_probs=192.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHH-HHHHHHHHHHHhhcc-h-hHHHHHHHHHHHhhhcCcc-cccee
Q 015136 60 SAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLG-IAMITSGIGLLSAFS-P-NYISLVTLRGLVGIGIGSG-PVFSA 135 (412)
Q Consensus 60 ~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~-~~~~~~i~~~~~~~~-~-~~~~~~~~r~l~G~~~g~~-~~~~~ 135 (412)
+..++..++..+..++..|+.|.++|+-|+||.++. ...+..+++.+..+. + +++...+.-++.-++.+.. ....+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678889999999999999999999998776654 444444555555543 3 3444444455555566665 55568
Q ss_pred eeeecccccch--------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHhc--------CChHHHH
Q 015136 136 WFLEFVPAAKR--------------------------GMWMVIFSTFWTLGSIFEAALAWIVMIT--------LNWRWLL 181 (412)
Q Consensus 136 ~i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~--------~~w~~~~ 181 (412)
++.|..+++++ ++..+.-.....+|.++...+.-.+... .+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999988888 8999998888888888877776665322 2358888
Q ss_pred HHHHHHHHHH-HHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhh
Q 015136 182 ALSSIPSFAV-LLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRI 260 (412)
Q Consensus 182 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (412)
.+.++..++. +...+++||.|+....+....-.+...+++.
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~-------------------------------------- 271 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLW-------------------------------------- 271 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHH--------------------------------------
Confidence 8887766555 5567778887652111111111111111111
Q ss_pred hhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcc
Q 015136 261 RITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLG 340 (412)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (412)
..++++.+.+ .+....+.+++..-....+......|.+ +..|++..+.........+.
T Consensus 272 ---------~t~k~~~~~~---~~~~fLia~~l~~dg~~ti~~~~~i~a~----------~~lg~s~~~l~~~~l~~~i~ 329 (477)
T PF11700_consen 272 ---------RTFKEIRKLR---QLFLFLIAYFLYSDGVNTIISFAGIYAT----------EVLGMSTTQLIVFGLVVQIV 329 (477)
T ss_pred ---------HHHHHHHhCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HhcCcCHHHHHHHHHHHHHH
Confidence 1333333333 3333333334333333333333443332 23579999999999999999
Q ss_pred hhhHHHHHHHHHHhhchh--hHHHHHHHHHHHHHHHHHh--------hhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCC
Q 015136 341 ELPGLVLAGIIVDRAGRK--LSLTIMLILVFICILPLAM--------LQSNILITGLLVGARMFAFGAFTIACIFTPEQL 410 (412)
Q Consensus 341 ~~~g~~~~g~l~dr~grr--~~l~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 410 (412)
+++|.++.|++.||+|.| +++.++.++..+..+.-.+ ..+.+-++++.++.|++.++..+..-++.+|+.
T Consensus 330 a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~Li 409 (477)
T PF11700_consen 330 AIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLI 409 (477)
T ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhC
Confidence 999999999999999988 7777766665333332222 456667888888999999999999999999999
Q ss_pred CC
Q 015136 411 GW 412 (412)
Q Consensus 411 P~ 412 (412)
|+
T Consensus 410 P~ 411 (477)
T PF11700_consen 410 PP 411 (477)
T ss_pred CC
Confidence 85
No 114
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.67 E-value=3.1e-16 Score=129.51 Aligned_cols=291 Identities=16% Similarity=0.110 Sum_probs=189.4
Q ss_pred cHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh-hcchhHHHHHHHHH
Q 015136 22 FQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDN-YGRKKGFLGIAMIT 100 (412)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~ 100 (412)
+|...+...|+..+..++.....+....++..+.+++.++..++.+.|..-..+.+++.|++.|| +|-|..-++-+.+.
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 45566666777778888888888888889999999999999999999999999999999999995 78887777777777
Q ss_pred HHHHHHhh---cchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015136 101 SGIGLLSA---FSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN 176 (412)
Q Consensus 101 ~i~~~~~~---~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 176 (412)
.++.++.+ .++.+|.+.++|++.|+|.-.. .+-..+..-|+..|+.+.++|+......+|..+-..+.+++.+..+
T Consensus 121 ~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~ 200 (459)
T KOG4686|consen 121 FLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMG 200 (459)
T ss_pred HHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHH
Confidence 77776664 4689999999999999987666 5556899999999999999999999999999887777777765432
Q ss_pred h------HHHHHHHHHHHHHHHHHHHhccCCchhhhhcCChH-HHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCC
Q 015136 177 W------RWLLALSSIPSFAVLLLYSLAPESPRYLNVKGRTT-EARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPP 249 (412)
Q Consensus 177 w------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (412)
= +....+...+........+.. ....+-.+ .+++.+++ ++...
T Consensus 201 ~~~~~~ghT~LG~~l~~~~~tc~~slic------al~lg~~D~rAerilh~----e~g~~-------------------- 250 (459)
T KOG4686|consen 201 RMFPGVGHTLLGLWLCFEVKTCKQSLIC------ALSLGLSDDRAERILHL----EEGFL-------------------- 250 (459)
T ss_pred HhcccchHHHHHHHHHHHHHHHHHHHHH------HHHhhhhhhHHHHHHhh----hcCcc--------------------
Confidence 1 111111101100000000000 00001111 11111110 00000
Q ss_pred CCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcc
Q 015136 250 DNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSS 329 (412)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (412)
.+.++.+ +.++ ++++ .+.....++++....+.+++. -|.++ .+.+|+++..
T Consensus 251 Ge~pkLt--------------dv~~-f~pp-fw~~~iicv~yyva~fPFi~l---g~~fF----------~~rfGlS~~~ 301 (459)
T KOG4686|consen 251 GEEPKLT--------------DVNT-FYPP-FWVLVIICVLYYVAWFPFITL---GPMFF----------QKRFGLSAVS 301 (459)
T ss_pred cCCcccc--------------cccc-cCcc-HHHHHHHHHHHHHHHHHHhhh---hHHHH----------HHhhCCChhh
Confidence 0000000 1111 1223 344444555555444444433 23332 2346799999
Q ss_pred hHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 015136 330 LYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFIC 371 (412)
Q Consensus 330 ~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~ 371 (412)
++...+.......+.+++.|.++||.|++...+.+..+..+.
T Consensus 302 a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~ 343 (459)
T KOG4686|consen 302 AGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLL 343 (459)
T ss_pred ccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHH
Confidence 999988888889999999999999999998877766554443
No 115
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.65 E-value=2.7e-15 Score=139.45 Aligned_cols=157 Identities=15% Similarity=0.119 Sum_probs=128.5
Q ss_pred hhhhhhhhhhcCCCc--------chhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcch----h
Q 015136 45 SFIGPAVKSEWGVSP--------SAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSP----N 112 (412)
Q Consensus 45 ~~~~~~~~~~~~~s~--------~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~----~ 112 (412)
....+...++.|.++ ++.+...++..++..++.++.|+++||+|||+++..+.++.+++..+..... +
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~ 307 (418)
T TIGR00889 228 NIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFG 307 (418)
T ss_pred HHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhh
Confidence 344455566666543 5679999999999999999999999999999999999999988876665532 2
Q ss_pred HHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHH-HHHHHHHHHHHHHHHHHHhc------CChHHHHHHH
Q 015136 113 YISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFS-TFWTLGSIFEAALAWIVMIT------LNWRWLLALS 184 (412)
Q Consensus 113 ~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~------~~w~~~~~~~ 184 (412)
.+.+++.+++.|++.+.. +....++.|++|+++|+++.|+.+ ...++|..+||.+++.+.++ +||+..|.+.
T Consensus 308 ~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~ 387 (418)
T TIGR00889 308 YALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFF 387 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHH
Confidence 456777899999998887 777888999999999999999997 67889999999999999886 4699999988
Q ss_pred HHHHHHH-HHHHHhccCC
Q 015136 185 SIPSFAV-LLLYSLAPES 201 (412)
Q Consensus 185 ~~~~~~~-~~~~~~~~~~ 201 (412)
+++.++. ++.+++++|+
T Consensus 388 ~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 388 AGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHhCCc
Confidence 8776665 4455666765
No 116
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.64 E-value=6.4e-15 Score=143.44 Aligned_cols=139 Identities=14% Similarity=0.108 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecc
Q 015136 63 SLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFV 141 (412)
Q Consensus 63 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~ 141 (412)
.+...+..++..++.++.|+++||+|||++++++.++.+++.++.++.++...+++.+++.|++.+.. +...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34456777899999999999999999999999999999999998888888888888888888877776 77889999999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhccCCc
Q 015136 142 PAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSLAPESP 202 (412)
Q Consensus 142 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (412)
|++.|++++|+..+...+|.+++|.+++.+.+. +...+|++.+++.++..++.+++||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999999988764 456777777777776666666778874
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.63 E-value=1.8e-13 Score=123.19 Aligned_cols=173 Identities=17% Similarity=0.152 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHhhHHHhhhhh-hhhhhhhcC----CCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-cchhHHHHHHHHH
Q 015136 27 FAYAGLAVFAEAMEIMILSFI-GPAVKSEWG----VSPSAESLLSTVVFAGNLVGVYLWGLLSDNY-GRKKGFLGIAMIT 100 (412)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~ 100 (412)
+..+...-+...+..+.+... .-++..+++ +|+++..-+.+.|..-.-+..+++|+++||+ |+|+++++|.++.
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~ 102 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILM 102 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 444455566666665555543 345555666 9999998888888888888899999999995 9999999999999
Q ss_pred HHHHHHhhcch--hHHHHHHHHHHHhhhcCcc-ccceeeeeeccccc--chhhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015136 101 SGIGLLSAFSP--NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAA--KRGMWMVIFSTFWTLGSIFEAALAWIVMITL 175 (412)
Q Consensus 101 ~i~~~~~~~~~--~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 175 (412)
.+|-++.+.++ +...++++..+.++|.|.. +...+++.|.+|++ +|-...+++.++.++|++++|.+.+++.+++
T Consensus 103 ~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~ 182 (498)
T COG3104 103 AIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY 182 (498)
T ss_pred HHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh
Confidence 99999998884 7888999999999999999 99999999999865 4777888999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhcc
Q 015136 176 NWRWLLALSSIPSFAVLLLYSLAP 199 (412)
Q Consensus 176 ~w~~~~~~~~~~~~~~~~~~~~~~ 199 (412)
||+..|...++-..+.++..+..+
T Consensus 183 g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 183 GWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999887777766655554
No 118
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.63 E-value=1e-14 Score=134.90 Aligned_cols=155 Identities=15% Similarity=0.129 Sum_probs=126.1
Q ss_pred hhhhhh-hhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 015136 45 SFIGPA-VKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLV 123 (412)
Q Consensus 45 ~~~~~~-~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~ 123 (412)
....|. +.+++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.....+........++.+.+++.+++.
T Consensus 236 ~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 315 (393)
T PRK15011 236 IINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLN 315 (393)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 334554 4577899999999998888888889999999999999999988877766665555555567777788888888
Q ss_pred hhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhccC
Q 015136 124 GIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSLAPE 200 (412)
Q Consensus 124 G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 200 (412)
+++.|.. +....+..|..| ++|++++++.+...++|..+++.+++.+.+..||+..|++.+++.++..+..++.||
T Consensus 316 ~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 316 AIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 8877765 555566778887 469999999999999999999999999999999999999888877777766666654
No 119
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.63 E-value=5e-15 Score=138.29 Aligned_cols=149 Identities=11% Similarity=0.029 Sum_probs=126.7
Q ss_pred hhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-c
Q 015136 53 SEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-P 131 (412)
Q Consensus 53 ~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~ 131 (412)
++.+.+..+.|++.++..++..++.++.|++.||+|+|+.+..+.++.+++..+..++++.+.+.+.+++.|++.+.. +
T Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 255 ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 334667778899999999999999999999999999999999999999998888888899999889999999988776 6
Q ss_pred cceeeeeecccccchhhHHHH-HHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH-HHhccCC
Q 015136 132 VFSAWFLEFVPAAKRGMWMVI-FSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLL-YSLAPES 201 (412)
Q Consensus 132 ~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~ 201 (412)
....++.|.+|++.|++..+. ++....+|.++++.+.+++.+..|||..|.+.+++.++..+. +...+++
T Consensus 335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 667888999999999887665 677888999999999999999999999999988776665443 4444443
No 120
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.63 E-value=1.1e-15 Score=119.49 Aligned_cols=135 Identities=27% Similarity=0.328 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeeccccc
Q 015136 66 STVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAA 144 (412)
Q Consensus 66 ~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~ 144 (412)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.+.....++.+.+.+.+++.|++.+.. +....++.|..|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34567788999999999999999999999999999999888888899999999999999999887 78888999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH-HhccC
Q 015136 145 KRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLY-SLAPE 200 (412)
Q Consensus 145 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~ 200 (412)
+|++..++.+....+|..+++.+.+.+.+..+|++.+.+.+...++..+.. +..||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999998999999998887766664443 33443
No 121
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.60 E-value=4.2e-14 Score=128.77 Aligned_cols=164 Identities=27% Similarity=0.328 Sum_probs=144.7
Q ss_pred HHHHhhHHHhhhhhhhhhhhhc-CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchh-HHHHHHHHHHHHHHHhhcch
Q 015136 34 VFAEAMEIMILSFIGPAVKSEW-GVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKK-GFLGIAMITSGIGLLSAFSP 111 (412)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~-~~~~~~~~~~i~~~~~~~~~ 111 (412)
.+.............|.+.++. |.++.+.++..+...++..++.++.+++.||+|||+ .+..+..+..++.+.....+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 263 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP 263 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 3344444455556667776665 999999999999999999999999999999999999 99999999999999999888
Q ss_pred hHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015136 112 NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFA 190 (412)
Q Consensus 112 ~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~ 190 (412)
+.+...+..++.|++.+.. +....++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+|+..+.+.+++.++
T Consensus 264 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i 343 (352)
T cd06174 264 SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALL 343 (352)
T ss_pred cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHH
Confidence 8899999999999999998 888899999999999999999999999999999999999999999999999999888777
Q ss_pred HHHHHHh
Q 015136 191 VLLLYSL 197 (412)
Q Consensus 191 ~~~~~~~ 197 (412)
..+..++
T Consensus 344 ~~i~~~~ 350 (352)
T cd06174 344 AALLLLL 350 (352)
T ss_pred HHHHhee
Confidence 6555433
No 122
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.60 E-value=3e-14 Score=132.60 Aligned_cols=160 Identities=20% Similarity=0.115 Sum_probs=129.8
Q ss_pred HHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 015136 41 IMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLR 120 (412)
Q Consensus 41 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r 120 (412)
........|.+.++.|.+..+.+...+...++..++.++.|+++||+|||+.+..+.+...++.++....++.+.+.+..
T Consensus 236 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (406)
T PRK11551 236 LYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAG 315 (406)
T ss_pred HHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 33444556788888999999999999999999999999999999999999998887777777766667777777777778
Q ss_pred HHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHhc
Q 015136 121 GLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITL-NWRWLLALSSIPSFAVLLLYSLA 198 (412)
Q Consensus 121 ~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~w~~~~~~~~~~~~~~~~~~~~~ 198 (412)
++.|++.+.. +...+++.|.+|+++|+++.|+.+....+|..++|.+.+.+.++. +|...++......++..+..+++
T Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 316 FAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877666 777788999999999999999999999999999999999998865 45666666555555554444444
Q ss_pred cC
Q 015136 199 PE 200 (412)
Q Consensus 199 ~~ 200 (412)
.+
T Consensus 396 ~~ 397 (406)
T PRK11551 396 VS 397 (406)
T ss_pred hc
Confidence 33
No 123
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.60 E-value=1.5e-14 Score=133.02 Aligned_cols=146 Identities=16% Similarity=0.129 Sum_probs=124.9
Q ss_pred hhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhH--HHHHHHHHHH
Q 015136 46 FIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNY--ISLVTLRGLV 123 (412)
Q Consensus 46 ~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~r~l~ 123 (412)
...+.+.+++|.+.++.+++.+.+.++..++.++.|++.||+|||+.+..+.++.+++.++..+.++. ..+++..++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALV 305 (377)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHH
Confidence 34455678889999899999999999999999999999999999999999998888888777666543 3344567788
Q ss_pred hhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 015136 124 GIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAV 191 (412)
Q Consensus 124 G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~ 191 (412)
|++.+.. +....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.++.||++.|.+.+++.++.
T Consensus 306 g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 306 FFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 8888876 6667788999999999999999999999999999999999999999999999887766554
No 124
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.58 E-value=7.9e-13 Score=116.79 Aligned_cols=291 Identities=15% Similarity=0.130 Sum_probs=187.9
Q ss_pred hhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc-----chhHHHH-HHHHHHHHHHHhhc-----ch------
Q 015136 49 PAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYG-----RKKGFLG-IAMITSGIGLLSAF-----SP------ 111 (412)
Q Consensus 49 ~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-----rr~~~~~-~~~~~~i~~~~~~~-----~~------ 111 (412)
-.+..|++++....+.+.++..+... ..+.+|+.+|+.+ ||..+++ |..++..+..+..+ +.
T Consensus 4 RVMIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 4 RVMIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred hhHHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 34667899999999999999888776 4899999999999 8877765 45555554444332 12
Q ss_pred -h--HH--HHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHH-HHH
Q 015136 112 -N--YI--SLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLL-ALS 184 (412)
Q Consensus 112 -~--~~--~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~-~~~ 184 (412)
+ .+ ...+...+.|+|.+.. ....++++|..|+|+|+++.++.....-+|.+++..+.+.+.+.++-.-.. .+.
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~ 162 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQ 162 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHH
Confidence 1 22 2334456678888887 777899999999999999999999999999999999999988877633332 222
Q ss_pred H--HHHHHHHHHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhh
Q 015136 185 S--IPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRI 262 (412)
Q Consensus 185 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (412)
+ ++.+...+...+-.|.+.....+.++++ ++
T Consensus 163 ~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~--------------------------------------~~--------- 195 (403)
T PF03209_consen 163 GVALIALLLNLIALWGQEPRRSRRAAAAERP--------------------------------------RP--------- 195 (403)
T ss_pred HHHHHHHHHHHHHHHhcccCCcccccCCCCC--------------------------------------Cc---------
Confidence 2 2222222222333333211000000000 00
Q ss_pred hhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchh
Q 015136 263 TKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGEL 342 (412)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (412)
+-...+++++..+..+++..... ...+.++.....+..|. .+.+|++..+...+....+.+.+
T Consensus 196 ----~f~~a~~~~~~~~~a~~f~~fl~---l~t~a~~~QD~iLEPyg----------g~Vfgmsv~eTT~Lta~~~~G~L 258 (403)
T PF03209_consen 196 ----PFREAWRQVWASPQARRFFVFLF---LGTLAFFMQDVILEPYG----------GEVFGMSVGETTRLTAFWGGGTL 258 (403)
T ss_pred ----cHHHHHHHHHhCCChhHHHHHHH---HHHHHHHhhHHHcCCch----------hHHcCCCHHHHHHHHHHHHHHHH
Confidence 00014444554444444333322 23345555555555444 45578999999999999999999
Q ss_pred hHHHHHHHHHH-hhchhhHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHHhhHhHHHHh
Q 015136 343 PGLVLAGIIVD-RAGRKLSLTIMLILVFICILPLAM---LQSNILITGLLVGARMFAFGAFTIACI 404 (412)
Q Consensus 343 ~g~~~~g~l~d-r~grr~~l~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (412)
+|....|++.. |.++++.-..++..++++..++.. ..+.+.+-...++.|++.+.......+
T Consensus 259 ~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals 324 (403)
T PF03209_consen 259 LGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALS 324 (403)
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHH
Confidence 99999998877 577788888888888887776664 445556666677777766654433333
No 125
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.58 E-value=8.7e-14 Score=129.17 Aligned_cols=156 Identities=17% Similarity=0.134 Sum_probs=129.8
Q ss_pred hhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 015136 44 LSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLV 123 (412)
Q Consensus 44 ~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~ 123 (412)
.....+.+.++.|. ++.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++....++.+.+++.+++.
T Consensus 235 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (399)
T PRK05122 235 IATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALT 312 (399)
T ss_pred HHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 33445555556665 3456677888899999999999999999999999999888888888887888888888889999
Q ss_pred hhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhccCC
Q 015136 124 GIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSLAPES 201 (412)
Q Consensus 124 G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 201 (412)
|++.+.. +.....+.|..|+++||++.++++....+|..+++.+.+.+.++.||++.|++.+++.++..+..++++++
T Consensus 313 G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 313 GFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9998876 66667777899999999999999999999999999999999999999999999888777766555555443
No 126
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.56 E-value=8.4e-14 Score=128.17 Aligned_cols=150 Identities=16% Similarity=0.182 Sum_probs=125.0
Q ss_pred hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCc
Q 015136 50 AVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGS 129 (412)
Q Consensus 50 ~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~ 129 (412)
.+.+++|.++.+.+++.+.......++.++.|++.||+|||+.+.++.++..+........++.+.+.+.+++.|++.+.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44577899999999988888888888899999999999999999888777666665556667888888888999998887
Q ss_pred c-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhccC
Q 015136 130 G-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSLAPE 200 (412)
Q Consensus 130 ~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 200 (412)
. +....++.|..|+ +++++.++.+....+|..++|.+.+.+.+..||+..|++.++..++..+...+++|
T Consensus 305 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 305 LAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheecC
Confidence 6 6667778888775 56799999999999999999999999999999999999988877776666555543
No 127
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.56 E-value=2e-12 Score=113.96 Aligned_cols=291 Identities=17% Similarity=0.139 Sum_probs=192.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHH-HHHHHHHHHHHhhcchh--HH-HHHHHHHHHhhhcCcc-ccce
Q 015136 60 SAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLG-IAMITSGIGLLSAFSPN--YI-SLVTLRGLVGIGIGSG-PVFS 134 (412)
Q Consensus 60 ~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~-~~~~~~i~~~~~~~~~~--~~-~~~~~r~l~G~~~g~~-~~~~ 134 (412)
+..+...++..+..++-+|+.|.++|+.|+||..+. ...+..++.++..+.++ .+ ..++...+..++.... ..-.
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 456788889999999999999999999997775554 44444555555555544 44 4445567777777777 4455
Q ss_pred eeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHH--HH----------------hcCChHHHHHHHHHHHHHH-HHHH
Q 015136 135 AWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWI--VM----------------ITLNWRWLLALSSIPSFAV-LLLY 195 (412)
Q Consensus 135 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~--l~----------------~~~~w~~~~~~~~~~~~~~-~~~~ 195 (412)
+++.+..++++-++..++-.....+|..+.-...-. +. +...-|..+.+.++..++. +..+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 899999999888888888666667776655444311 11 1223577777777665555 4445
Q ss_pred HhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhc
Q 015136 196 SLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLL 275 (412)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 275 (412)
+..++.++-. .+......+..+++ +.+++++
T Consensus 218 ~~v~~~~~~~--~~~~~~l~~g~k~L-----------------------------------------------~~t~k~i 248 (438)
T COG2270 218 LNVHDAEKIS--SPPPTALRNGFKEL-----------------------------------------------KSTFKEI 248 (438)
T ss_pred hccccccccc--ccchHHHHHHHHHH-----------------------------------------------HHHHHHH
Confidence 5555544310 01101111111111 1144555
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhh
Q 015136 276 FSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRA 355 (412)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~ 355 (412)
++++....+++..+.+.- ...+.......|.. ..+|.+..+..+......+..++|+++.|++.||+
T Consensus 249 ~~~~~i~~FLiA~~~~~D---Gv~til~~~~~fg~----------~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf 315 (438)
T COG2270 249 RGRKNLVLFLIARFFYID---GVNTILAMGGVFGA----------ADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF 315 (438)
T ss_pred hcccchHHHHHHHHHHHh---hHHHHHHHHHHHHH----------HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 554444444444333321 11122222222221 23579999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 356 GRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 356 grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
|.|+++.++.++..+..+...+.......+++.++.|.+.++..+..-+|.+++.|+
T Consensus 316 g~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~ 372 (438)
T COG2270 316 GSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPK 372 (438)
T ss_pred CCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCC
Confidence 999999999988888888777766677777888899999999999999999999885
No 128
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.54 E-value=1.4e-13 Score=126.79 Aligned_cols=152 Identities=14% Similarity=0.010 Sum_probs=132.3
Q ss_pred HHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 015136 41 IMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLR 120 (412)
Q Consensus 41 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r 120 (412)
...+....|.+.+++|.++.+.|.+.+...++..++.++.+++.||+|+|+.+.++.+..++...+.+++++.+.+++.+
T Consensus 221 ~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q 300 (382)
T TIGR00902 221 HAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQ 300 (382)
T ss_pred HHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHH
Confidence 33444455666678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCcc-ccceeeeeecccccchhhHHHHHH-HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 015136 121 GLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFS-TFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLL 194 (412)
Q Consensus 121 ~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~ 194 (412)
++.|+..+.. +....++.+. |+++|++..++++ ...++|..+++.++|.+.++.|+ ..|+..+.++++..+.
T Consensus 301 ~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 301 ILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999999998 8888899988 9999999999976 57889999999999999999986 6677776666655444
No 129
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.54 E-value=2e-13 Score=129.23 Aligned_cols=169 Identities=19% Similarity=0.161 Sum_probs=124.3
Q ss_pred HHHHHHHHHhhHHHhhhhhhhh-hhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHH--
Q 015136 29 YAGLAVFAEAMEIMILSFIGPA-VKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGL-- 105 (412)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~-- 105 (412)
.+++..++............|. +.+++|.|..+.++..+...++..++.++.|+++||+|||+.+..+..+..++..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~ 341 (467)
T PRK09556 262 LLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLG 341 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHH
Confidence 3344444444444445556665 4577999999999999999999999999999999999999877665544443332
Q ss_pred HhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHH-HHHHHHHHHHHHHh----------
Q 015136 106 LSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTL-GSIFEAALAWIVMI---------- 173 (412)
Q Consensus 106 ~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~---------- 173 (412)
.....++.....+.+++.|++.... ........|.+|++.||++.|+.+...++ |..++|.+.+.+.+
T Consensus 342 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~ 421 (467)
T PRK09556 342 VYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFG 421 (467)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccccc
Confidence 2233456666667788888654332 33335566999999999999999988886 77999999999999
Q ss_pred --cCChHHHHHHHHHHHHHHHHHHHh
Q 015136 174 --TLNWRWLLALSSIPSFAVLLLYSL 197 (412)
Q Consensus 174 --~~~w~~~~~~~~~~~~~~~~~~~~ 197 (412)
..+|+..|.+..+..++..+..++
T Consensus 422 ~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 422 YTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred ccccChHHHHHHHHHHHHHHHHHHHH
Confidence 578999998887766665544443
No 130
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.54 E-value=2e-13 Score=127.42 Aligned_cols=159 Identities=18% Similarity=0.089 Sum_probs=134.6
Q ss_pred hhhhhhhhhhh-cCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 015136 44 LSFIGPAVKSE-WGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGL 122 (412)
Q Consensus 44 ~~~~~~~~~~~-~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 122 (412)
.....|.+.++ +|.++.+.+++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+...+..++
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLAL 321 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 34456666666 89999999999999999999999999999999888888888888888888888888888888888889
Q ss_pred HhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH-HHHHHhccC
Q 015136 123 VGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAV-LLLYSLAPE 200 (412)
Q Consensus 123 ~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~ 200 (412)
.|++.+.. +...+++.|..|+++||+++|++.....+|..+|+.+.+.+.+..|++..+.+.+...++. .+....+++
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 322 FGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccc
Confidence 99988776 6667888999999999999999999999999999999999999999999888877655554 455556666
Q ss_pred Cc
Q 015136 201 SP 202 (412)
Q Consensus 201 ~~ 202 (412)
.+
T Consensus 402 ~~ 403 (417)
T PRK10489 402 LR 403 (417)
T ss_pred cc
Confidence 53
No 131
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.54 E-value=1.4e-13 Score=128.27 Aligned_cols=155 Identities=14% Similarity=0.119 Sum_probs=126.4
Q ss_pred hhhhhhhhhhhhcCCCcch----hHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 015136 43 ILSFIGPAVKSEWGVSPSA----ESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVT 118 (412)
Q Consensus 43 ~~~~~~~~~~~~~~~s~~~----~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 118 (412)
...+..+.+.++.+.+..+ .+.+.++..++..++.+..|++.||+|||+.+..+..+..++.+.....++.+.+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGI 316 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 3344455555554333332 456666777888899999999999999999999998888888777777788888888
Q ss_pred HHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHh
Q 015136 119 LRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSL 197 (412)
Q Consensus 119 ~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~ 197 (412)
.+++.|++.+.. +...+.+.+..|+++||+.+++.+....+|..+||.+++.+.+..||+..|++.+++.++..+..++
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 317 LRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999887 7777788888899999999999999999999999999999999999999999998877776554433
No 132
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.54 E-value=4.5e-12 Score=110.26 Aligned_cols=262 Identities=18% Similarity=0.125 Sum_probs=164.2
Q ss_pred HhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 015136 42 MILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRG 121 (412)
Q Consensus 42 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~ 121 (412)
..-++..-.+.+++|++..|++.+....+....+..++.|.++||+|||+.-+..+++.+++++ +-..++++.++++|+
T Consensus 51 WLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRv 129 (354)
T PF05631_consen 51 WLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRV 129 (354)
T ss_pred HhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHH
Confidence 4455666677789999999999999999999999999999999999999999999999999886 455689999999999
Q ss_pred HHhhhcCcc-ccceee-eeecc----cccchhhHHHHHH-HHHHHHHHHHHHHHHHHHhcCCh--HHHHHHHHHHHHHHH
Q 015136 122 LVGIGIGSG-PVFSAW-FLEFV----PAAKRGMWMVIFS-TFWTLGSIFEAALAWIVMITLNW--RWLLALSSIPSFAVL 192 (412)
Q Consensus 122 l~G~~~g~~-~~~~~~-i~~~~----~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~w--~~~~~~~~~~~~~~~ 192 (412)
+.|++.... .+--++ +.|+- |++..+...+... ...++-.+....++..+.+..+. ..+|....+..++..
T Consensus 130 lgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~ 209 (354)
T PF05631_consen 130 LGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAA 209 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHH
Confidence 999999987 655554 44553 3333333333333 23334455556666667666554 677777766655554
Q ss_pred HH-HHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccc
Q 015136 193 LL-YSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSS 271 (412)
Q Consensus 193 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (412)
+. ....+|+..... +..+..+..++ .
T Consensus 210 ~~I~~~W~ENyg~~~---~~~~~~~~~~~--------------------------------------------------a 236 (354)
T PF05631_consen 210 VLILKTWPENYGDTS---SSSSLSGSFRE--------------------------------------------------A 236 (354)
T ss_pred HHHHhcccccCCCcc---cccchHHHHHH--------------------------------------------------H
Confidence 33 333455432100 00000000000 1
Q ss_pred hhhccchhhHHHHHHHHHHHHHHHHHHHHH-HHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHH
Q 015136 272 FLLLFSSRLVRTTLLLWMLFFGNSFTYYGI-ILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGI 350 (412)
Q Consensus 272 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~ 350 (412)
++.++++ ++.+.......+.-.+.|.+ ..|.|.+..+ .....-|+.+..+.++.++|+.+..+
T Consensus 237 ~~~i~~d---~ril~LG~~qslFE~smy~FVflWtPaL~~~-------------~~~~P~GlIFssFM~a~MlGS~lf~~ 300 (354)
T PF05631_consen 237 WRAILSD---PRILLLGLIQSLFEGSMYLFVFLWTPALDPD-------------DEELPLGLIFSSFMVAMMLGSSLFSR 300 (354)
T ss_pred HHHHHcC---chhHHHHHHHHHHHHHHHHheeeeeceecCC-------------CCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 2222222 34444555555555555554 4577765511 12234688888888888999988866
Q ss_pred HHH-hhchhhHHHHHHHHHHHHHH
Q 015136 351 IVD-RAGRKLSLTIMLILVFICIL 373 (412)
Q Consensus 351 l~d-r~grr~~l~~~~~~~~~~~~ 373 (412)
+.. +......+.....+.++++.
T Consensus 301 l~s~~~~~e~~l~~v~~~aa~~l~ 324 (354)
T PF05631_consen 301 LLSKSLRPESLLRYVFAVAAVSLA 324 (354)
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHH
Confidence 554 44444444444444444443
No 133
>PRK12382 putative transporter; Provisional
Probab=99.53 E-value=2.2e-13 Score=126.15 Aligned_cols=152 Identities=14% Similarity=0.149 Sum_probs=128.0
Q ss_pred hhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 015136 43 ILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGL 122 (412)
Q Consensus 43 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 122 (412)
......|.+.++.+.+. .++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+.+..++
T Consensus 234 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (392)
T PRK12382 234 VIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAAL 311 (392)
T ss_pred HHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 34444555556666653 4666777888889999999999999999999999999888888888788888888888999
Q ss_pred HhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 015136 123 VGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYS 196 (412)
Q Consensus 123 ~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~ 196 (412)
.|++.+.. +...+.+.|.+|+++||++.|+.+....+|..++|.+.+.+.++.||+..|.+.+++.++..+..+
T Consensus 312 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 312 TGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 99998877 777778889999999999999999999999999999999999999999999998877776654433
No 134
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.53 E-value=1.4e-13 Score=131.58 Aligned_cols=145 Identities=17% Similarity=0.124 Sum_probs=113.8
Q ss_pred hhhhhhhh-hhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc--hhHHHHHHHHH
Q 015136 45 SFIGPAVK-SEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS--PNYISLVTLRG 121 (412)
Q Consensus 45 ~~~~~~~~-~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~r~ 121 (412)
....|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+++..+.++..+..+..... .+.+.+.+..+
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLF 374 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 34566666 5899999999999999999999999999999999999999888877766665443332 33444444445
Q ss_pred HHhhh-cCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 015136 122 LVGIG-IGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSF 189 (412)
Q Consensus 122 l~G~~-~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~ 189 (412)
+.+.. .+..+....++.|.+|+++|++++++......+|..++|.+++.+.++.||+..+...+....
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~ 443 (496)
T PRK03893 375 FQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLT 443 (496)
T ss_pred HHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHH
Confidence 44433 333355667888999999999999999999999999999999999999999988866554433
No 135
>PRK03545 putative arabinose transporter; Provisional
Probab=99.53 E-value=4.6e-13 Score=123.86 Aligned_cols=149 Identities=20% Similarity=0.164 Sum_probs=119.6
Q ss_pred hhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHH-HhhcchhHHHHHHHHHHH
Q 015136 45 SFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGL-LSAFSPNYISLVTLRGLV 123 (412)
Q Consensus 45 ~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~r~l~ 123 (412)
+...|.+.+++|.|..+.+++.+...++..+++++.|+++||+|||+.. .+..+..++.. +....++.+.+.+..++.
T Consensus 226 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 304 (390)
T PRK03545 226 SYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFW 304 (390)
T ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 3344556666899999999999999999999999999999999988754 44444444443 334566778888888899
Q ss_pred hhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 015136 124 GIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLY 195 (412)
Q Consensus 124 G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~ 195 (412)
|++.+.. +.....+.|..| ++|++++|+......+|..+||.+++.+.++.|++..|++.+++.++..+..
T Consensus 305 g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~ 376 (390)
T PRK03545 305 GIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWS 376 (390)
T ss_pred HHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHH
Confidence 9988766 656667777766 6889999999999999999999999999999999999999988777665443
No 136
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.53 E-value=2.4e-11 Score=108.73 Aligned_cols=336 Identities=15% Similarity=0.075 Sum_probs=203.1
Q ss_pred HHhhhhhhhhhhhh-cCCCcchhH-HHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 015136 41 IMILSFIGPAVKSE-WGVSPSAES-LLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVT 118 (412)
Q Consensus 41 ~~~~~~~~~~~~~~-~~~s~~~~~-~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 118 (412)
+..-+...|.+.+. .|++..|+. -+.-...-.+....++...+.|..+.|++++++.+...+...+..+.++...+-+
T Consensus 20 rPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~ 99 (412)
T PF01770_consen 20 RPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQL 99 (412)
T ss_pred CCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHH
Confidence 34455666777776 788888774 5566677778888999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCChHHHHHHHHHHHHHHHHHHH
Q 015136 119 LRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI--TLNWRWLLALSSIPSFAVLLLYS 196 (412)
Q Consensus 119 ~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~w~~~~~~~~~~~~~~~~~~~ 196 (412)
..+..|++.+...+-.+++-...|+++--++.+...++.-+|..++..++..+.. ..+++...++......+.++..+
T Consensus 100 ~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~ 179 (412)
T PF01770_consen 100 MQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIAL 179 (412)
T ss_pred HHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988877777888888898998999999999999999999999998877 34466666666665566667777
Q ss_pred hccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhcc
Q 015136 197 LAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLF 276 (412)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 276 (412)
++|..++...-+++..+..+ .++ ...+..++.++...+.++++... ........+.-.+++++..
T Consensus 180 fLP~~~~S~~f~r~~~~~~~-------~~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~~~~~y 244 (412)
T PF01770_consen 180 FLPMPKRSLFFHRKPPAEQD-------ANE-------SESDKMNESPESSSSTEKSPSTE-SSSRKSVLRLLWKDFKSCY 244 (412)
T ss_pred HcCCCCcccceeccCccccc-------ccc-------ccccccccccccccccccCcccc-cchHHHHHHHHHHHHHHHh
Confidence 88876543222221111000 000 00000000000000000000000 0001111112223444444
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhc
Q 015136 277 SSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAG 356 (412)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g 356 (412)
+.+.... ..+-|.....+++....+...+..+. .+.+.....-|..-....+.+.++.+..|++..++.
T Consensus 245 ~~~~ll~---WSlWWa~atcgy~qv~nYvQ~LW~~v--------~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~ 313 (412)
T PF01770_consen 245 SNPRLLL---WSLWWAFATCGYYQVINYVQSLWDTV--------PPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWD 313 (412)
T ss_pred cCchHHH---HHHHHHHHHhHHHHHHHHHHHHHHhc--------CCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchH
Confidence 4332222 12222222222332222222222211 011233344566777777778888899999866666
Q ss_pred hhh--HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHH
Q 015136 357 RKL--SLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIA 402 (412)
Q Consensus 357 rr~--~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (412)
+.. .+....++.+.+++++...++.+...+..++.+.......++.
T Consensus 314 ~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA 361 (412)
T PF01770_consen 314 RWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIA 361 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 543 3334445556666666677777777776666665555444443
No 137
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.52 E-value=3.5e-13 Score=122.62 Aligned_cols=184 Identities=18% Similarity=0.127 Sum_probs=146.6
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhh--cCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcc-hhHHHHH
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSE--WGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGR-KKGFLGI 96 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~~~~~ 96 (412)
++.+|+.+.+..+..++.....+++.+..-++.++ .+.+.+..|++.++..++.+++++..|+...|.+. |+.++.|
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s 108 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVS 108 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHH
Confidence 56778888888888888888877777666555566 67778888999999999999999999999999997 8889999
Q ss_pred HHHHHHHHHHh-hc---ch-hHHHHHHHHHHHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015136 97 AMITSGIGLLS-AF---SP-NYISLVTLRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIV 171 (412)
Q Consensus 97 ~~~~~i~~~~~-~~---~~-~~~~~~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 171 (412)
.++..++.++. ++ .+ ..+.++++|++.|+|.|.....-+|+++....+.|.++++....+..+|..+||.+...+
T Consensus 109 ~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 109 FLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 99999999877 32 23 678889999999999998888889999998899999999999999999999999988776
Q ss_pred Hhc--CC-----------hHHHHHHHHHHHHHHHH-HHHhccCCch
Q 015136 172 MIT--LN-----------WRWLLALSSIPSFAVLL-LYSLAPESPR 203 (412)
Q Consensus 172 ~~~--~~-----------w~~~~~~~~~~~~~~~~-~~~~~~~~~~ 203 (412)
..- .| +..+-++.+++.++.++ +.++++|.++
T Consensus 189 ~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 189 TPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred hhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 431 11 23445666666666544 4555666654
No 138
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.52 E-value=1.1e-13 Score=130.37 Aligned_cols=156 Identities=14% Similarity=0.139 Sum_probs=124.9
Q ss_pred hhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh--cchhHHHH--HHHHHHHHHHHhhcchhH
Q 015136 38 AMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNY--GRKKGFLG--IAMITSGIGLLSAFSPNY 113 (412)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~--Grr~~~~~--~~~~~~i~~~~~~~~~~~ 113 (412)
...........|.+.+++|.+..+.+++.++..++..++.++.|+++||. ++|+...+ +.++.+++.++....+++
T Consensus 254 ~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~ 333 (455)
T TIGR00892 254 FLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDY 333 (455)
T ss_pred HHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 33333444456677778899999999999999999999999999999984 34433333 334444555556677888
Q ss_pred HHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHH
Q 015136 114 ISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITL-NWRWLLALSSIPSFAV 191 (412)
Q Consensus 114 ~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~w~~~~~~~~~~~~~~ 191 (412)
+.+++.+++.|++.+.. +...+++.|.+|++++++++|+.+...++|..+||.+++.+.+.. +|++.|++.++..++.
T Consensus 334 ~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~ 413 (455)
T TIGR00892 334 TGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSA 413 (455)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHH
Confidence 88899999999999887 777888999999999999999999999999999999999998876 5999999988766554
Q ss_pred HH
Q 015136 192 LL 193 (412)
Q Consensus 192 ~~ 193 (412)
.+
T Consensus 414 ~~ 415 (455)
T TIGR00892 414 GL 415 (455)
T ss_pred HH
Confidence 43
No 139
>PRK03699 putative transporter; Provisional
Probab=99.51 E-value=2.9e-13 Score=125.27 Aligned_cols=167 Identities=10% Similarity=0.048 Sum_probs=130.4
Q ss_pred HHHHHhhHHHhhhhhhhhhh-hhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcch
Q 015136 33 AVFAEAMEIMILSFIGPAVK-SEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSP 111 (412)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 111 (412)
..+........+....|.+. +++|.|..+.+.+.+.+.++..++.++.|+++||+|||+.+.....+..+...+....+
T Consensus 213 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~ 292 (394)
T PRK03699 213 AALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD 292 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC
Confidence 33333334444555666665 67899999999999999999999999999999999999999888877777666666677
Q ss_pred hHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015136 112 NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFA 190 (412)
Q Consensus 112 ~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~ 190 (412)
+.+.+.+..++.|++.+.. +...++..|..| +++++..+.......+|..++|.+.+.+.+..||+..++..+++.++
T Consensus 293 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~ 371 (394)
T PRK03699 293 DPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAV 371 (394)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHH
Confidence 7777777778888877765 665566666665 45678888988899999999999999999999999999888877666
Q ss_pred HHHHHHhccC
Q 015136 191 VLLLYSLAPE 200 (412)
Q Consensus 191 ~~~~~~~~~~ 200 (412)
..+.....++
T Consensus 372 ~~~~~~~~~~ 381 (394)
T PRK03699 372 VFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHH
Confidence 6554444443
No 140
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.51 E-value=7.3e-13 Score=122.08 Aligned_cols=151 Identities=17% Similarity=0.158 Sum_probs=123.4
Q ss_pred hhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHh
Q 015136 45 SFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVG 124 (412)
Q Consensus 45 ~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G 124 (412)
....|.+.++.|.+.++.++..+...++..+++++.|++.||+|+|+.+..+..+.+++.+... . ........++.|
T Consensus 220 ~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g 296 (381)
T PRK03633 220 YGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILG 296 (381)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHH
Confidence 3456777778899999999999999999999999999999999999999888888777665443 2 233345667778
Q ss_pred hhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhc
Q 015136 125 IGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSLA 198 (412)
Q Consensus 125 ~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~ 198 (412)
++.... |...+.+.|..|+++++...+......++|.++||.+++.+.++.+|++.|.+.+.+.++..+..+..
T Consensus 297 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 297 AAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 776665 77788888999988888888888889999999999999999999999999999887776655554443
No 141
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.51 E-value=7.6e-13 Score=125.87 Aligned_cols=178 Identities=19% Similarity=0.149 Sum_probs=132.8
Q ss_pred HHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHH
Q 015136 25 LVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIG 104 (412)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 104 (412)
..+....+..+.............|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+..+.++.+++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 284 RLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 33444444444444444455667788889999999888999999999999999999999999999999999888887776
Q ss_pred HHhhc-----ch------hHHHHHHHHH-HHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015136 105 LLSAF-----SP------NYISLVTLRG-LVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVM 172 (412)
Q Consensus 105 ~~~~~-----~~------~~~~~~~~r~-l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 172 (412)
++..+ .+ +...+....+ ..+.+.+..+....++.|.+|+++|++++++.+...++|.+++|.+.+.+.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 364 FVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66542 11 2222222222 233333333566678899999999999999999999999999999999999
Q ss_pred hcCChHHHHHHHHHHHHHHHHH-HHhccCCc
Q 015136 173 ITLNWRWLLALSSIPSFAVLLL-YSLAPESP 202 (412)
Q Consensus 173 ~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~ 202 (412)
++.+|++.|++.+++.++..+. .++.||++
T Consensus 444 ~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 444 ESIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HhcCccceehhHHHHHHHHHHHHheecccCC
Confidence 9899999999888777766554 34456543
No 142
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.50 E-value=2.1e-15 Score=142.47 Aligned_cols=306 Identities=16% Similarity=0.152 Sum_probs=3.0
Q ss_pred HHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhc
Q 015136 30 AGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAF 109 (412)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 109 (412)
+++..+.+..........+.++.+.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-+|.++.+++.+++++
T Consensus 8 ~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~l 87 (539)
T PF03137_consen 8 LCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFAL 87 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhc
Confidence 34444555666777778899999999999999999999999999999999999999988888888999999999887754
Q ss_pred c----h----------------------------------------------hHHHHHHHHHHHhhhcCcc-ccceeeee
Q 015136 110 S----P----------------------------------------------NYISLVTLRGLVGIGIGSG-PVFSAWFL 138 (412)
Q Consensus 110 ~----~----------------------------------------------~~~~~~~~r~l~G~~~g~~-~~~~~~i~ 138 (412)
- + -+..++++.++.|+|.... +...+|+-
T Consensus 88 Phf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiD 167 (539)
T PF03137_consen 88 PHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYID 167 (539)
T ss_dssp ----------------------------------------------------------------SSS-------------
T ss_pred cHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeec
Confidence 1 0 0244778899999999998 99999999
Q ss_pred ecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc---------------------C-ChHHHHHHHHHHHHHHHHHHH
Q 015136 139 EFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMIT---------------------L-NWRWLLALSSIPSFAVLLLYS 196 (412)
Q Consensus 139 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---------------------~-~w~~~~~~~~~~~~~~~~~~~ 196 (412)
|..++++-+..+|+..+...+|.++|.++++.+.+. . .|..-|++.+.+.++..+.++
T Consensus 168 Dnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~ 247 (539)
T PF03137_consen 168 DNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLF 247 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999876531 1 266667777776666666666
Q ss_pred hccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchhhcc
Q 015136 197 LAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLF 276 (412)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 276 (412)
++|++.+...+.++.++.++ .+. + +.+.++..+ .++.. ....+.+.-....++++
T Consensus 248 ~FPk~lp~~~~~~~~~~~~~--~~~---~-------------~~~~~~~~~-~~~~~------~~~~~~~df~~~l~~Ll 302 (539)
T PF03137_consen 248 FFPKKLPGTSERQEEKESSE--RKE---E-------------DSDKDSFKD-PKSKK------SFGKSIKDFPKALKRLL 302 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCccCCCcccccchhhhhh--cch---h-------------hhhhhcccc-ccccc------chhhhhhhHHHHHHHHh
Confidence 66654321100000000000 000 0 000000000 00000 00000011112333344
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHc-chhhHHHHHHHHHHhh
Q 015136 277 SSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASL-GELPGLVLAGIIVDRA 355 (412)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~ 355 (412)
+.+ .+....+..........++..+.|.|.. .+++.++..+.+......+ +..+|.+++|++.+|+
T Consensus 303 ~Np---~f~~~~la~~~~~~~~~G~~tF~pKylE----------~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~ 369 (539)
T PF03137_consen 303 TNP---VFMCLILAGVFESFIVSGFATFLPKYLE----------SQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKF 369 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEe
Confidence 333 3334444445556666777788887774 3467888887777655444 5678899999999997
Q ss_pred c--hhhHHHHHHHHHHHHHH
Q 015136 356 G--RKLSLTIMLILVFICIL 373 (412)
Q Consensus 356 g--rr~~l~~~~~~~~~~~~ 373 (412)
+ .|..+....+...++.+
T Consensus 370 kl~~~~~~~~~~v~~~v~~~ 389 (539)
T PF03137_consen 370 KLSARGAAKFCIVVSIVSVI 389 (539)
T ss_dssp --------------------
T ss_pred cCcHHHHHHHHHHHHHHHHH
Confidence 5 45555444444444433
No 143
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.48 E-value=1.8e-12 Score=119.78 Aligned_cols=162 Identities=15% Similarity=0.109 Sum_probs=123.7
Q ss_pred hHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcch-hHHHHH
Q 015136 39 MEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSP-NYISLV 117 (412)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~~~ 117 (412)
..........|.+.+++|.+..+.+...+.+.++..++.++.|++.||+|||+.+..+..+..++..+....+ +...+
T Consensus 219 ~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~- 297 (393)
T PRK09705 219 GGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL- 297 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH-
Confidence 3444455566777777999999999999999999999999999999999999999988888777766554323 32222
Q ss_pred HHHHHHhhhcCcc-ccceeeeeeccc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHH-
Q 015136 118 TLRGLVGIGIGSG-PVFSAWFLEFVP-AAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN-WRWLLALSSIPSFAVLL- 193 (412)
Q Consensus 118 ~~r~l~G~~~g~~-~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w~~~~~~~~~~~~~~~~- 193 (412)
.-++.|++.+.. +.......+..+ +++|++..++.+....++..++|.+.+++.+..| |...|.+..+..++..+
T Consensus 298 -~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK09705 298 -WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMII 376 (393)
T ss_pred -HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 234567877776 665555566664 6789999999999999999999999999999876 78888887766665544
Q ss_pred HHHhccCCc
Q 015136 194 LYSLAPESP 202 (412)
Q Consensus 194 ~~~~~~~~~ 202 (412)
...+.||++
T Consensus 377 ~~~~~~~~~ 385 (393)
T PRK09705 377 TLRFAPARF 385 (393)
T ss_pred HHHhccccc
Confidence 355666654
No 144
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.47 E-value=2.1e-11 Score=112.68 Aligned_cols=322 Identities=19% Similarity=0.142 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcch-hHHHHHH----HHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Q 015136 25 LVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSA-ESLLSTV----VFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~~~~s~----~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
.+.....+-.+..+..........+...+.++.+..+ .+..... ..+...+.++..|.++||+|||..+....+.
T Consensus 22 ~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~ 101 (463)
T KOG2816|consen 22 HLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHH
Confidence 3444455555555555555556666666666543322 2333333 3677889999999999999999999999998
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHhhhcCc--c-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015136 100 TSGIGLLSAFSPNYISLVTLRGLVGIGIGS--G-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN 176 (412)
Q Consensus 100 ~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~--~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 176 (412)
..+..+...+.. +|.++ +.|+..+. . ....++++|....++|....|+.+.....+..++|.+++.+.+..|
T Consensus 102 ~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~ 176 (463)
T KOG2816|consen 102 TILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG 176 (463)
T ss_pred HHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC
Confidence 888887776655 33333 55554443 2 6677999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHH-HHHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcc
Q 015136 177 WRWLLALSSIPSFAVL-LLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLL 255 (412)
Q Consensus 177 w~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (412)
.-..|.+..+..++.. ...+++||+.....+++ .+. .+.+........
T Consensus 177 ~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~--~~~-----------------------~~~~~~~~~~~~------ 225 (463)
T KOG2816|consen 177 IALVFLIAAASGILSLLYMLLFLPESLQEKERSD--ATL-----------------------RELTPGSLDSSH------ 225 (463)
T ss_pred chHHHHHHHHHHHHHHHHHhhccccccCcccccc--ccc-----------------------cccCCCcccchh------
Confidence 9999999888777764 45677888643111000 000 000000000000
Q ss_pred cchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHH-hhhcccccccccccccccccCCCCcchHHHH
Q 015136 256 TSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIIL-MTSKLSSTQSKCGTTLTVSQSMHDSSLYLSV 334 (412)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (412)
..+ .+....+.+..|..+..+...+.......+-.. ....| .....+.++.+.+...
T Consensus 226 ---------~~~---~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~y----------l~~~f~w~~~~~s~~~ 283 (463)
T KOG2816|consen 226 ---------VAD---AFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLY----------LKAKFGWNKKEFSDLL 283 (463)
T ss_pred ---------hhh---hhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEE----------EeeecCcCHHHHHHHH
Confidence 000 111111111112222222222222111111111 11222 2234689999999888
Q ss_pred HHHHcchhhHHHHHH-HHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhh
Q 015136 335 FLASLGELPGLVLAG-IIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIF 405 (412)
Q Consensus 335 ~~~~~~~~~g~~~~g-~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (412)
+.....+.+++.+.. .+...+|-|+....|.....+....+.+.++.|..+....+..+ .....|...++
T Consensus 284 ~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~-~~~~~pa~~s~ 354 (463)
T KOG2816|consen 284 SLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVAL-AGIVFPAIRAF 354 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHh-hcchhHHHHhH
Confidence 888999999998777 77777898889999999999999999988777765554444332 23334444333
No 145
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.47 E-value=1.9e-12 Score=120.18 Aligned_cols=164 Identities=14% Similarity=0.114 Sum_probs=123.4
Q ss_pred HHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHH-HHHHHHHHHHHHhh----
Q 015136 34 VFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFL-GIAMITSGIGLLSA---- 108 (412)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~-~~~~~~~i~~~~~~---- 108 (412)
.++............|.+.+++|.+..+.+++.+...++..++.+..|+++||+|||+.+. .+.+..+++.+...
T Consensus 231 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~ 310 (402)
T TIGR00897 231 RIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQ 310 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344445556778888899999999999999999999999999999999999988764 33333333332222
Q ss_pred -cchhHHHHHHHHHHHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 015136 109 -FSPNYISLVTLRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIP 187 (412)
Q Consensus 109 -~~~~~~~~~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~ 187 (412)
..++.+.+.+..++.|++.+........+.|. ++++||++.|+.+....+|..++|.+++.+.+..||+..+++.+++
T Consensus 311 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~ 389 (402)
T TIGR00897 311 HFGHSFAVALIIAIALGIFLAGYVPLAAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAAL 389 (402)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Confidence 13456667778888888877652223445565 4568999999999999999999999999999999999999998877
Q ss_pred HHHHHHHHHhc
Q 015136 188 SFAVLLLYSLA 198 (412)
Q Consensus 188 ~~~~~~~~~~~ 198 (412)
.++..+...++
T Consensus 390 ~~i~~~~~~~~ 400 (402)
T TIGR00897 390 YVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHh
Confidence 77665554443
No 146
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.46 E-value=1.4e-12 Score=123.72 Aligned_cols=304 Identities=15% Similarity=0.164 Sum_probs=211.7
Q ss_pred HHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 015136 26 VFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGL 105 (412)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 105 (412)
.+.++++..+.+++....+...+.++.+.|+++.++.|++.+.+-++..+...+..+...|.-|-+.+-+|.++++++.+
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsl 177 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSL 177 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHH
Confidence 45556677777777778888899999999999999999999999999999999999999999999999999999999998
Q ss_pred Hhhcc--------------------h---------------------------h----HH-HHHHHHHHHhhhcCcc-cc
Q 015136 106 LSAFS--------------------P---------------------------N----YI-SLVTLRGLVGIGIGSG-PV 132 (412)
Q Consensus 106 ~~~~~--------------------~---------------------------~----~~-~~~~~r~l~G~~~g~~-~~ 132 (412)
++++- + + ++ .++++.++.|+|.... +.
T Consensus 178 l~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tl 257 (735)
T KOG3626|consen 178 LFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTL 257 (735)
T ss_pred HHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccC
Confidence 87651 0 0 22 4667899999999998 99
Q ss_pred ceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------------ChHHHHHHHHHHHHHHHH
Q 015136 133 FSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITL-------------------NWRWLLALSSIPSFAVLL 193 (412)
Q Consensus 133 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-------------------~w~~~~~~~~~~~~~~~~ 193 (412)
..+|+-|...+++-...+|+..+...+|.++|.++++++...+ -|+.-|++.+.+.++..+
T Consensus 258 GisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~ 337 (735)
T KOG3626|consen 258 GISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAV 337 (735)
T ss_pred CCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999976421 277778888888887777
Q ss_pred HHHhccCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccCCCCCcccCCCCCCCcccchhhhhhhhcccccchh
Q 015136 194 LYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFL 273 (412)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (412)
.++++|.+.+. .+++.++++ .+.. .++....++.....+ ..+.-....+
T Consensus 338 p~f~fPk~lp~---~~~~~~~~~----~~~~------------------k~~~~~~~~~~~~~~------~ikdfp~s~~ 386 (735)
T KOG3626|consen 338 PLFFFPKELPK---SQKRKRARD----LHVL------------------KTESGGAKSDKTFGK------KIKDFPKSIK 386 (735)
T ss_pred HHHhCcccCcc---ccccchhhh----hccc------------------ccccccccCCcchhh------hHHHHHHHHH
Confidence 77788765431 111100000 0000 000000000000000 0000011334
Q ss_pred hccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcc-hhhHHHHHHHHH
Q 015136 274 LLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLG-ELPGLVLAGIIV 352 (412)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~g~l~ 352 (412)
++++.+ .+....+...+....+.+...++|.|+. .++|.++..+...+...++. ..+|.+++|++.
T Consensus 387 ~ll~N~---if~~~~l~~~~~~~~~~G~~tFlPKyLE----------~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~ii 453 (735)
T KOG3626|consen 387 RLLSNP---IFMLVVLASVIESLAITGYITFLPKYLE----------TQFGISASLANILTGSIGVPAAAVGIFLGGLII 453 (735)
T ss_pred HHhcCc---hHHHHHHHHHHHHHHHhhHHHhhHHHHH----------HHcCCCHHHHHHHhhhhhhhhhhhhhhccceee
Confidence 444443 3444555566667777888888998874 44788888888877555544 457888999999
Q ss_pred Hhhc--hhhHHHHHHHHHHHHHH
Q 015136 353 DRAG--RKLSLTIMLILVFICIL 373 (412)
Q Consensus 353 dr~g--rr~~l~~~~~~~~~~~~ 373 (412)
.|+. .|......++...++++
T Consensus 454 kkfkl~~r~~a~~~~~~~~l~l~ 476 (735)
T KOG3626|consen 454 KKFKLSARGAAKFVIVCSVLSLL 476 (735)
T ss_pred eeecccHHHHHHHHHHHHHHHHH
Confidence 9974 44444444444444333
No 147
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.46 E-value=4.6e-12 Score=120.66 Aligned_cols=162 Identities=16% Similarity=0.055 Sum_probs=121.4
Q ss_pred HHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcch--h-HH-HH
Q 015136 41 IMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSP--N-YI-SL 116 (412)
Q Consensus 41 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~-~~-~~ 116 (412)
........|.+.++.|.+.....+......++..++.++.++++||+|||+.++.+.++.+++.++..... + .+ ..
T Consensus 287 ~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 287 INVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred hhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 33445567888899999888778887888889999999999999999999999999999888877654321 1 11 22
Q ss_pred HHHHHHHhhhcCc-c-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHH------hcCChHHHHHHHHHHH
Q 015136 117 VTLRGLVGIGIGS-G-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVM------ITLNWRWLLALSSIPS 188 (412)
Q Consensus 117 ~~~r~l~G~~~g~-~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~------~~~~w~~~~~~~~~~~ 188 (412)
..+.++.+.+.+. . +....++.|.+|+++|++++|+......+|..+++.+.+.+. +..+|++.|++.++..
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMG 446 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHH
Confidence 2334444444443 2 667789999999999999999999999999988876665443 5788999898887766
Q ss_pred HHHHHH-HHhccCCc
Q 015136 189 FAVLLL-YSLAPESP 202 (412)
Q Consensus 189 ~~~~~~-~~~~~~~~ 202 (412)
++..+. +++.||++
T Consensus 447 ~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 447 VLAALFMWKFVPETK 461 (479)
T ss_pred HHHHHHHHhccccCC
Confidence 665444 44566653
No 148
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.44 E-value=3.6e-12 Score=121.74 Aligned_cols=172 Identities=19% Similarity=0.083 Sum_probs=115.0
Q ss_pred HHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHH------------HHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Q 015136 32 LAVFAEAMEIMILSFIGPAVKSEWGVSPSAESL------------LSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~------------~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
...+......+......|.+.++.|.+..+.+. ...+..++..++.++.++++||+|||+.++++..+
T Consensus 295 ~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~ 374 (502)
T TIGR00887 295 GSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFI 374 (502)
T ss_pred HHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHH
Confidence 333333333344455578888888887543221 23344456667889999999999999999888887
Q ss_pred HHHHHHHhhcchh----HHHHHHHHHHHhh-hcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015136 100 TSGIGLLSAFSPN----YISLVTLRGLVGI-GIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMIT 174 (412)
Q Consensus 100 ~~i~~~~~~~~~~----~~~~~~~r~l~G~-~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 174 (412)
.+++.++.+...+ ...+...-+...+ +.+..+....+.+|.+|++.|+++.|+.+....+|.+++|.+.+.+.+.
T Consensus 375 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 454 (502)
T TIGR00887 375 LTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQH 454 (502)
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcc
Confidence 7777655543221 1111111111222 2222355667789999999999999999999999999999999998873
Q ss_pred ----------CChHHHHHHHHHHHHHHHHHHHhccCCch
Q 015136 175 ----------LNWRWLLALSSIPSFAVLLLYSLAPESPR 203 (412)
Q Consensus 175 ----------~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (412)
.++...|++.+++.++..+..+++||++.
T Consensus 455 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 455 GDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred ccccccccccccchHHHHHHHHHHHHHHHHheEeccCCC
Confidence 34566777777666666555667788743
No 149
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.43 E-value=2.9e-12 Score=119.16 Aligned_cols=136 Identities=18% Similarity=0.225 Sum_probs=112.2
Q ss_pred hhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHH-HhhcchhHHHHHHHHHHHhhhc
Q 015136 49 PAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGL-LSAFSPNYISLVTLRGLVGIGI 127 (412)
Q Consensus 49 ~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~r~l~G~~~ 127 (412)
+.+.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+..+..+..+... .....++.+.+.+..++.|+..
T Consensus 263 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (405)
T TIGR00891 263 TYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLV 342 (405)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 445567899999999999999999999999999999999999998888776643332 3334456666666667777766
Q ss_pred Ccc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHH
Q 015136 128 GSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN-WRWLLALS 184 (412)
Q Consensus 128 g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w~~~~~~~ 184 (412)
+.. +...+++.|.+|+++|++++|+.+....+|..++|++.+.+.++.| |+..+...
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 343 QGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred ccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 655 6677888999999999999999999999999999999999999888 87766553
No 150
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.43 E-value=2.9e-12 Score=118.65 Aligned_cols=165 Identities=18% Similarity=0.167 Sum_probs=118.8
Q ss_pred HHHHHHHhhHHHhhhhhhhhh-hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchh--HHH------HHHHHHH
Q 015136 31 GLAVFAEAMEIMILSFIGPAV-KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKK--GFL------GIAMITS 101 (412)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~--~~~------~~~~~~~ 101 (412)
.+..+.............|.+ .+++|.+..+.+++.+...++..++.++.|++.||+|||+ ... .+.++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
T TIGR00893 221 ALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLS 300 (399)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Confidence 344444444445555555555 5668999999999999999999999999999999999996 111 1111111
Q ss_pred HHHHHhhcchhHHHHHHHHHHHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHH
Q 015136 102 GIGLLSAFSPNYISLVTLRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN-WRWL 180 (412)
Q Consensus 102 i~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w~~~ 180 (412)
+........++.+.......+.+.+.+..+...+++.|..|+++|+++.++.+....+|..++|.+.+.+.+..| |+..
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~ 380 (399)
T TIGR00893 301 LLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGA 380 (399)
T ss_pred HHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHH
Confidence 222222223344444444455555555237888899999999999999999999999999999999999999888 9999
Q ss_pred HHHHHHHHHHHHHHH
Q 015136 181 LALSSIPSFAVLLLY 195 (412)
Q Consensus 181 ~~~~~~~~~~~~~~~ 195 (412)
|.+.++..++..+..
T Consensus 381 ~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 381 LMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHHHHHHHHH
Confidence 988887766654443
No 151
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.43 E-value=7.3e-12 Score=117.37 Aligned_cols=141 Identities=19% Similarity=0.169 Sum_probs=106.3
Q ss_pred hhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 015136 44 LSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLV 123 (412)
Q Consensus 44 ~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~ 123 (412)
.....|.+.++.|.++.+.+...+...++..++.++.|++.||+|||+.+..+.++.++..+.....++.....+.-++.
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 44456777778899999999999999999999999999999999999999888877766655443322211122222333
Q ss_pred hhh--cCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 015136 124 GIG--IGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALS 184 (412)
Q Consensus 124 G~~--~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~ 184 (412)
|++ .... +....++.|.+|+++||+++|+......+|..++|.+.+.+.++.|+....++.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~ 393 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFI 393 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 332 2222 445567789999999999999999999999999999999999988876544433
No 152
>PRK09952 shikimate transporter; Provisional
Probab=99.43 E-value=8.1e-12 Score=117.15 Aligned_cols=157 Identities=13% Similarity=0.065 Sum_probs=115.6
Q ss_pred hhhhh-hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhc---c-hhHHHHHHH
Q 015136 45 SFIGP-AVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAF---S-PNYISLVTL 119 (412)
Q Consensus 45 ~~~~~-~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~---~-~~~~~~~~~ 119 (412)
....| .+.+++|.+.+....+.....+...++.++.|+++||+|||+.++.+.++..++...... . ++.+.+++.
T Consensus 270 ~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (438)
T PRK09952 270 TAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFS 349 (438)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHH
Confidence 33444 445678888877666666677778889999999999999999988887766554433322 2 234444555
Q ss_pred HHHHhhhcCcc-ccceeeeeecccccchhhHHHHHH-HHHHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHH
Q 015136 120 RGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFS-TFWTLGSIFEAALAWIVMITL--NWRWLLALSSIPSFAVLLLY 195 (412)
Q Consensus 120 r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~--~w~~~~~~~~~~~~~~~~~~ 195 (412)
.++.|++.+.. +...+++.|.+|++.|+.+.++.. .+..+|..++|.+.+.+.+.. +|+..+.+.++..++..+..
T Consensus 350 ~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~ 429 (438)
T PRK09952 350 IMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTA 429 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHH
Confidence 66777887776 677788999999999999999854 445589999999999998743 48888887777777776666
Q ss_pred HhccCC
Q 015136 196 SLAPES 201 (412)
Q Consensus 196 ~~~~~~ 201 (412)
+.++|+
T Consensus 430 ~~~~~~ 435 (438)
T PRK09952 430 LLMKDN 435 (438)
T ss_pred HHcccc
Confidence 666664
No 153
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.42 E-value=2.9e-12 Score=107.91 Aligned_cols=177 Identities=20% Similarity=0.109 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHH
Q 015136 23 QYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSG 102 (412)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i 102 (412)
||..+..........+ ..+.++.+.|.+++++|+|.+|...+.+.-.+|..+ +++.|.+.|++|+|.++++|.+...+
T Consensus 1 rW~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSG-TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ChhhHHHHHHHHHhcC-cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 4565555555444444 567888999999999999999999999999999987 58899999999999999999999999
Q ss_pred HHHHhhcc-------hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015136 103 IGLLSAFS-------PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMIT 174 (412)
Q Consensus 103 ~~~~~~~~-------~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 174 (412)
|..+...+ .++|.+.+..++.|.+.+.. ........+.+| ++||++.|+.-...++++.+-..+...+.+.
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 98766432 46788888888888876665 555555567887 6899999999999999998887777776655
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccCCc
Q 015136 175 LNWRWLLALSSIPSFAVLLLYSLAPESP 202 (412)
Q Consensus 175 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (412)
..-+..+.....+.++.++...++++.|
T Consensus 158 ~~~~fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 158 DPSSFLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred ChHHHHHHHHHHHHHHHHHHhhheeccC
Confidence 4444544444455555555556665544
No 154
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.42 E-value=1.9e-12 Score=119.85 Aligned_cols=158 Identities=16% Similarity=0.156 Sum_probs=120.5
Q ss_pred HHHHHHhhHHHhhhhhhhhhh-hhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHH--HHhh
Q 015136 32 LAVFAEAMEIMILSFIGPAVK-SEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIG--LLSA 108 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~--~~~~ 108 (412)
+..+.............|.+. +++|.+..+.+...+...++..++.++.|+++||+|||+.+..+..+..+.. ....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 305 (394)
T TIGR00883 226 GLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA 305 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444445555566665 7789999999999999999999999999999999999998876555444333 1222
Q ss_pred c--chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHH-HHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHH
Q 015136 109 F--SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVI-FSTFWTLGSIFEAALAWIVMITLN-WRWLLAL 183 (412)
Q Consensus 109 ~--~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~-w~~~~~~ 183 (412)
. .++.+.+.+..++.|++.+.. +...+++.|.+|+++|+++.++ .+....+|..++|.+++.+.++.| |+..++.
T Consensus 306 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~ 385 (394)
T TIGR00883 306 LLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYY 385 (394)
T ss_pred HhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHH
Confidence 2 246667777788888888776 7788999999999999999998 456667889999999999999888 8887776
Q ss_pred HHHHHH
Q 015136 184 SSIPSF 189 (412)
Q Consensus 184 ~~~~~~ 189 (412)
.....+
T Consensus 386 ~~~~~l 391 (394)
T TIGR00883 386 LAALAL 391 (394)
T ss_pred HHHHHH
Confidence 655443
No 155
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.40 E-value=1.1e-11 Score=117.57 Aligned_cols=155 Identities=13% Similarity=0.184 Sum_probs=119.5
Q ss_pred hhhhhhhhcCCCcchhHHHHH-HHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHh---hcc-hhHHHHHHHHH
Q 015136 47 IGPAVKSEWGVSPSAESLLST-VVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLS---AFS-PNYISLVTLRG 121 (412)
Q Consensus 47 ~~~~~~~~~~~s~~~~~~~~s-~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~-~~~~~~~~~r~ 121 (412)
..|.+.+++|.|.++.++..+ ...++..++.++.|+++||+|+|+.+.++.++.+++.+.. +.. ++.+.+.+.-+
T Consensus 245 ~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~ 324 (491)
T PRK11010 245 TTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVF 324 (491)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 445556789999999999974 6668999999999999999999998877666555544322 232 35555555566
Q ss_pred HHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhccC
Q 015136 122 LVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSLAPE 200 (412)
Q Consensus 122 l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 200 (412)
+..++.|.. +...++..+..+++.+++..++.+...++|..+++.+.+.+.+..||+..|.+.+++.++..+....+++
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 655555554 5556777788898999999999999999999999999999999999999999988888877666555554
Q ss_pred C
Q 015136 201 S 201 (412)
Q Consensus 201 ~ 201 (412)
+
T Consensus 405 ~ 405 (491)
T PRK11010 405 T 405 (491)
T ss_pred c
Confidence 3
No 156
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.40 E-value=8.9e-12 Score=117.61 Aligned_cols=150 Identities=18% Similarity=0.131 Sum_probs=133.8
Q ss_pred hhhhhhhh-hhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 015136 45 SFIGPAVK-SEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLV 123 (412)
Q Consensus 45 ~~~~~~~~-~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~ 123 (412)
...+|.+. +++|.++...|++.+.+.+|..+|+++.+++.+|+++++.+..+.++.+++.+..+++++.+...+..++.
T Consensus 238 ~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~ 317 (524)
T PF05977_consen 238 WALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLA 317 (524)
T ss_pred HHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 34567665 56899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 015136 124 GIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLL 194 (412)
Q Consensus 124 G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~ 194 (412)
|++.... ....+.+-+..|++.|||+++++.+....+..+|..+.|.+.+..|-+..+.+.++..++..++
T Consensus 318 G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 318 GAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 9998877 6667888899999999999999999999999999999999999999999988877655554443
No 157
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.40 E-value=8.7e-12 Score=115.60 Aligned_cols=139 Identities=15% Similarity=0.063 Sum_probs=118.6
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccce
Q 015136 56 GVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFS 134 (412)
Q Consensus 56 ~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~ 134 (412)
+.+....|...++..+...++.+..|++.||+|||+.+.++.++.++...+....++.+.+++.+++.|++.+.. ....
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 556667898999999999999999999999999999999999988888887778889998888999999987665 4555
Q ss_pred eeeeecccccchhhHHHH-HHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 015136 135 AWFLEFVPAAKRGMWMVI-FSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLL 194 (412)
Q Consensus 135 ~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~ 194 (412)
.+..+..+++.+++..+. .+....+|..+++.+++++.+..||+..|.+.+++.++..+.
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 677777888888887766 678899999999999999999999999999988877666443
No 158
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.40 E-value=1.4e-11 Score=109.76 Aligned_cols=161 Identities=19% Similarity=0.193 Sum_probs=133.5
Q ss_pred HHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhc-chhH
Q 015136 35 FAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAF-SPNY 113 (412)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~-~~~~ 113 (412)
+........+++.-|.+.+..|.|.+.++++.-.+.++..+|..+.|++.|| +.|+.+.....+.++..+...+ .++.
T Consensus 222 l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~ 300 (394)
T COG2814 222 LFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASP 300 (394)
T ss_pred HHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchH
Confidence 3334445667788899999999999999999999999999999999999999 9999999888888777766554 4555
Q ss_pred HHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 015136 114 ISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVL 192 (412)
Q Consensus 114 ~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~ 192 (412)
+..++.-++.|+..+.. ......+++ .-+|.+..+.+++....++|..+|..+++.+.+++|+....++.++..++..
T Consensus 301 ~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~ 379 (394)
T COG2814 301 ALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLAL 379 (394)
T ss_pred HHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Confidence 66666677777777766 455566667 4568999999999999999999999999999999999999999998887776
Q ss_pred HHHHh
Q 015136 193 LLYSL 197 (412)
Q Consensus 193 ~~~~~ 197 (412)
+..+.
T Consensus 380 ~~~~~ 384 (394)
T COG2814 380 LLALL 384 (394)
T ss_pred HHHHH
Confidence 55444
No 159
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.39 E-value=1e-11 Score=117.53 Aligned_cols=149 Identities=11% Similarity=0.014 Sum_probs=103.7
Q ss_pred hhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchh-------HHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 015136 49 PAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKK-------GFLGIAMITSGIGLLSAFSPNYISLVTLRG 121 (412)
Q Consensus 49 ~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~-------~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~ 121 (412)
+.+.+++|.+..+.+.+.+++.++..++.++.|+++||+|||+ ...+..++.++..++....++.+...+..+
T Consensus 277 ~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~ 356 (476)
T PLN00028 277 EYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMI 356 (476)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 3446778999999999999999999999999999999998762 233333333333444455556665555556
Q ss_pred HHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcc
Q 015136 122 LVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSLAP 199 (412)
Q Consensus 122 l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 199 (412)
+.+++.+.. ....+++.+.. +++||.+.|+.+.+..+|..+++.+.+ ..+..+|+..|++.+++.++..++.++++
T Consensus 357 l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 357 LFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 666655444 44455556654 478999999988877777777766543 22345699999999877777766655554
No 160
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.39 E-value=1.3e-11 Score=116.39 Aligned_cols=164 Identities=14% Similarity=0.055 Sum_probs=110.9
Q ss_pred HHHHHHhhHHHhhhhhhhhhhh-hcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh--cchhHH-HHHHHHHHHHHHHh
Q 015136 32 LAVFAEAMEIMILSFIGPAVKS-EWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNY--GRKKGF-LGIAMITSGIGLLS 107 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~--Grr~~~-~~~~~~~~i~~~~~ 107 (412)
+..+......+......|.+.+ ++|.+..+.++..+.+.++..++.++.|+++||+ |||+.. .....+..++.+..
T Consensus 260 l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~ 339 (452)
T PRK11273 260 IANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVY 339 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHH
Confidence 3333333333445556666655 4799999999999999999999999999999999 555432 22223333333222
Q ss_pred hc--chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHH-HHHHHHHHHhcCChHHHHHH
Q 015136 108 AF--SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIF-EAALAWIVMITLNWRWLLAL 183 (412)
Q Consensus 108 ~~--~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~w~~~~~~ 183 (412)
.. ..+.+...+..++.|.+.... .....+..|.+|+++||+++|+.+....+|..+ +|.+.+.+.++.||+..|++
T Consensus 340 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~ 419 (452)
T PRK11273 340 WLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMV 419 (452)
T ss_pred HHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHH
Confidence 22 234444444555555543222 233345679999999999999999888887654 79999999999999999998
Q ss_pred HHHHHHHHHHHH
Q 015136 184 SSIPSFAVLLLY 195 (412)
Q Consensus 184 ~~~~~~~~~~~~ 195 (412)
.+..+++.++..
T Consensus 420 ~~~~~~~~~~~~ 431 (452)
T PRK11273 420 MIGGSILAVILL 431 (452)
T ss_pred HHHHHHHHHHHH
Confidence 887666664443
No 161
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.38 E-value=1.7e-11 Score=114.89 Aligned_cols=164 Identities=15% Similarity=0.097 Sum_probs=112.2
Q ss_pred HHHHHHhhHHHhhhhhhhhhh-hhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh--cchhHH-HH---HHHHHHHHH
Q 015136 32 LAVFAEAMEIMILSFIGPAVK-SEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNY--GRKKGF-LG---IAMITSGIG 104 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~--Grr~~~-~~---~~~~~~i~~ 104 (412)
+..+.............|.+. +++|.+..+.+...+.+.++..++.++.|+++||+ ++|+.. .. +..+..+..
T Consensus 250 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK11663 250 FSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSL 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHH
Confidence 333333444444555566665 67899999999999999999999999999999999 333322 22 222222222
Q ss_pred HHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHH
Q 015136 105 LLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLAL 183 (412)
Q Consensus 105 ~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~ 183 (412)
.... ..+.....+..+..|++.... ........|.+|+++|++++|+.+....+|..++|.+.+.+.++.||+..|++
T Consensus 330 ~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~ 408 (434)
T PRK11663 330 WLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVV 408 (434)
T ss_pred HHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHH
Confidence 2222 233333334444445433222 22334567999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 015136 184 SSIPSFAVLLLYS 196 (412)
Q Consensus 184 ~~~~~~~~~~~~~ 196 (412)
.+++.++..+...
T Consensus 409 ~~~~~~~~~~~~~ 421 (434)
T PRK11663 409 ISIAAGISALLLL 421 (434)
T ss_pred HHHHHHHHHHHHH
Confidence 8887776654443
No 162
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.38 E-value=1.8e-11 Score=112.84 Aligned_cols=144 Identities=10% Similarity=-0.057 Sum_probs=120.6
Q ss_pred hhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhh
Q 015136 46 FIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGI 125 (412)
Q Consensus 46 ~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~ 125 (412)
...|.+.++.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++....++.+.+++..++.|+
T Consensus 226 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 305 (382)
T PRK11128 226 GFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCG 305 (382)
T ss_pred HHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 34455557799999999999999999999999999999999999999999999999888888888999999999999999
Q ss_pred hcCcc-ccceeeeeecccccchhhHHHHHH-HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 015136 126 GIGSG-PVFSAWFLEFVPAAKRGMWMVIFS-TFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAV 191 (412)
Q Consensus 126 ~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~ 191 (412)
+.+.. +....++.+. +++++++..+..+ ...++|..+||.++|.+.+..|+ ..++..+.+.++.
T Consensus 306 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 306 TFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 98887 7777777776 5666788888876 66678889999999999999887 4566666555544
No 163
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.37 E-value=7e-12 Score=114.80 Aligned_cols=131 Identities=20% Similarity=0.178 Sum_probs=116.8
Q ss_pred hhhhhhhhh-cCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchh-HHHHHHHHHHH
Q 015136 46 FIGPAVKSE-WGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPN-YISLVTLRGLV 123 (412)
Q Consensus 46 ~~~~~~~~~-~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~r~l~ 123 (412)
...|.+.++ +|.+..+.+++.+...++..++.++.+++.||+|||+.+..+..+.+++.....+.++ .+.+.+..++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 556777665 8999999999999999999999999999999999999999888888888777777664 88888889999
Q ss_pred hhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015136 124 GIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN 176 (412)
Q Consensus 124 G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 176 (412)
|++.+.. +...+++.|..|+++|+++.++.+....+|..+++.+++.+.++.|
T Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 312 GVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999887 7788899999999999999999999999999999999999988654
No 164
>TIGR00895 2A0115 benzoate transport.
Probab=99.36 E-value=1.2e-11 Score=114.68 Aligned_cols=140 Identities=21% Similarity=0.201 Sum_probs=111.9
Q ss_pred HHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcch
Q 015136 32 LAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSP 111 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 111 (412)
+..+.............|.+.+++|.+..+.+...+...++..++.++.|++.||+|||+......+.......+....+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (398)
T TIGR00895 257 LLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLF 336 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 33344444445556667888899999999999999999999999999999999999999554444433333333333356
Q ss_pred hHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015136 112 NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIV 171 (412)
Q Consensus 112 ~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 171 (412)
+.+...+..++.|++.+.. +...+++.|.+|+++|+++.|+......+|..++|.+++.+
T Consensus 337 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 337 SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 7777778889999998887 78889999999999999999999999999999999998875
No 165
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.36 E-value=4.2e-11 Score=111.86 Aligned_cols=160 Identities=19% Similarity=0.244 Sum_probs=137.7
Q ss_pred HhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcch--hHHHHHHHHHHHHHHHhhc--------ch
Q 015136 42 MILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRK--KGFLGIAMITSGIGLLSAF--------SP 111 (412)
Q Consensus 42 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr--~~~~~~~~~~~i~~~~~~~--------~~ 111 (412)
.+.........+++|++..+...+.-+..+...+|++++|++.||+|.| ++++.+.+++.+..+...+ .+
T Consensus 299 ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~ 378 (477)
T PF11700_consen 299 TIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLK 378 (477)
T ss_pred HHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcc
Confidence 3444445556669999999999999999999999999999999999999 8888888888666555444 57
Q ss_pred hHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHH
Q 015136 112 NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN-WRWLLALSSIPSF 189 (412)
Q Consensus 112 ~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w~~~~~~~~~~~~ 189 (412)
+.+.+.+.-++.|+..|.. +..-++.+|..|+++.+...|++....-....+||++.+.+.+..| -|+.+....++.+
T Consensus 379 ~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~ 458 (477)
T PF11700_consen 379 SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFL 458 (477)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 8888999999999999998 8888999999999999999999999999999999999999998776 8898888888777
Q ss_pred HHHHHHHhccCC
Q 015136 190 AVLLLYSLAPES 201 (412)
Q Consensus 190 ~~~~~~~~~~~~ 201 (412)
+.+++++.++.+
T Consensus 459 ~gl~ll~~v~~~ 470 (477)
T PF11700_consen 459 IGLILLFFVDVE 470 (477)
T ss_pred HHHHHHhhccch
Confidence 777777666554
No 166
>PRK15075 citrate-proton symporter; Provisional
Probab=99.35 E-value=3e-11 Score=113.36 Aligned_cols=142 Identities=14% Similarity=0.172 Sum_probs=102.3
Q ss_pred HhhHHHhhhhhhhhhhhh-cCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH----hhcch
Q 015136 37 EAMEIMILSFIGPAVKSE-WGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLL----SAFSP 111 (412)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~----~~~~~ 111 (412)
............|.+.++ +|.+..+.++....+.++..++.++.|+++||+|||+.++.+..+..+.... ....+
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAP 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 333444555566776554 8999999999999999999999999999999999999888765544332211 11223
Q ss_pred hHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHH-HHHHHHHHHHHHHHHHHhcCChH
Q 015136 112 NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFST-FWTLGSIFEAALAWIVMITLNWR 178 (412)
Q Consensus 112 ~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~~w~ 178 (412)
+.....+..++.|++.+.. +....++.|.+|+++|+++.++... +..++..++|.+.+.+.++.|++
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 330 SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 4444444455566666655 5556788999999999999998644 44445778999999999988864
No 167
>PRK10504 putative transporter; Provisional
Probab=99.35 E-value=1.7e-11 Score=116.41 Aligned_cols=140 Identities=14% Similarity=0.144 Sum_probs=112.3
Q ss_pred hhHHHhhhhhhhhhhh-hcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc---hhH
Q 015136 38 AMEIMILSFIGPAVKS-EWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS---PNY 113 (412)
Q Consensus 38 ~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~---~~~ 113 (412)
...........|.+.+ .+|.++.+.++......++..++.++.+++.||+|||+++..+..+.+++..+..+. ++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (471)
T PRK10504 274 RIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWY 353 (471)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccH
Confidence 3334445556676665 589999999999999999999999999999999999999999988888776655443 334
Q ss_pred HHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 015136 114 ISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNW 177 (412)
Q Consensus 114 ~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 177 (412)
+.+.+..++.|++.+.. +.......+..|++.++.+.++.+....+|..+|+.+++.+.+..++
T Consensus 354 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 354 YLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 44455667778887776 66677788889999999999999999999999999999998776654
No 168
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.33 E-value=2.3e-10 Score=105.23 Aligned_cols=180 Identities=17% Similarity=0.135 Sum_probs=139.2
Q ss_pred cHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHH
Q 015136 22 FQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITS 101 (412)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 101 (412)
.|+.....+.+.......+.+....+...+.++-|++..+..+.+....+...+..+++..+.||+|||+.++.+..++.
T Consensus 267 lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~ 346 (485)
T KOG0569|consen 267 LRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMA 346 (485)
T ss_pred hhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 34444445555555555666777788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcch---hHH------HHHHHHHHHhh--hcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 015136 102 GIGLLSAFSP---NYI------SLVTLRGLVGI--GIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWI 170 (412)
Q Consensus 102 i~~~~~~~~~---~~~------~~~~~r~l~G~--~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 170 (412)
+..+++.... +.. ..+++.++..+ +.|..|...-+.+|.+|++.|..++++......+...+-......
T Consensus 347 ~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~ 426 (485)
T KOG0569|consen 347 VALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPP 426 (485)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887765431 111 12344444444 444447788889999999999999999999999988888888888
Q ss_pred HHhcCChHHHHHHHHHHHHHH-HHHHHhccCCc
Q 015136 171 VMITLNWRWLLALSSIPSFAV-LLLYSLAPESP 202 (412)
Q Consensus 171 l~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~ 202 (412)
+.+..|= +.|....++.++. +..+..+||++
T Consensus 427 l~~~~g~-~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 427 LQNVIGP-YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 8777775 6666666666655 56688899985
No 169
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.32 E-value=2.9e-11 Score=111.88 Aligned_cols=147 Identities=12% Similarity=0.059 Sum_probs=110.5
Q ss_pred hhhhhhhhcCCCcchhHHHHHHHH-HHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhc------chhHHHHHHH
Q 015136 47 IGPAVKSEWGVSPSAESLLSTVVF-AGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAF------SPNYISLVTL 119 (412)
Q Consensus 47 ~~~~~~~~~~~s~~~~~~~~s~~~-~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~ 119 (412)
..+.+.+|.|++++++|++.+... ....++.++.|++.||+|+|+.+..+..+.++....... .++...+...
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 345556678999999999988876 466778899999999999999988877665333322211 2233344444
Q ss_pred HHHHhhhcCcc-ccceeeeeecccc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 015136 120 RGLVGIGIGSG-PVFSAWFLEFVPA-AKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLL 193 (412)
Q Consensus 120 r~l~G~~~g~~-~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~ 193 (412)
..+.+++.+.. +...+.+.+..++ +++++.+++.+...++|..++|.+++.+.+..||+..|...+++.++..+
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 55666666666 5556666666665 88999999999999999999999999999999999999888776665433
No 170
>TIGR00898 2A0119 cation transport protein.
Probab=99.31 E-value=3.1e-11 Score=115.69 Aligned_cols=148 Identities=21% Similarity=0.132 Sum_probs=113.2
Q ss_pred hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhH--HHHHHHHHHHhhhc
Q 015136 50 AVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNY--ISLVTLRGLVGIGI 127 (412)
Q Consensus 50 ~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~r~l~G~~~ 127 (412)
...++++.+. .+...+..+....+.++.+++.||+|||+.+.++.++.+++.++..+.++. +...+..++.+++.
T Consensus 348 ~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 424 (505)
T TIGR00898 348 LDLGNLGGNI---YLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGI 424 (505)
T ss_pred ccccccCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Confidence 3344455443 333445566778889999999999999999999999988888777666543 44455556666666
Q ss_pred Ccc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhccCCc
Q 015136 128 GSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSLAPESP 202 (412)
Q Consensus 128 g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (412)
+.. +....+..|.+|++.|++++|+.+....+|.+++|.+.+ +. ..++...+.+.+...++..+..+++||+.
T Consensus 425 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 425 TSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred HHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 665 677789999999999999999999999999999999988 43 35677777887777777766677888864
No 171
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.31 E-value=7.2e-11 Score=111.08 Aligned_cols=130 Identities=20% Similarity=0.250 Sum_probs=105.4
Q ss_pred hhhhhhhh-cCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHh
Q 015136 47 IGPAVKSE-WGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS-PNYISLVTLRGLVG 124 (412)
Q Consensus 47 ~~~~~~~~-~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~r~l~G 124 (412)
..+.+.++ ++ ++.+.+++.+...++..++.+++++++||+|+|+++..+..+.+++.+...+. ++.+.+.+..++.|
T Consensus 244 ~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 322 (437)
T TIGR00792 244 VQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAG 322 (437)
T ss_pred hhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHH
Confidence 34444433 34 56677888888899999999999999999999999999998888887766554 45667777788889
Q ss_pred hhcCcc-ccceeeeeeccc-------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 015136 125 IGIGSG-PVFSAWFLEFVP-------AAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNW 177 (412)
Q Consensus 125 ~~~g~~-~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 177 (412)
++.+.. +...++++|..+ ++++|...|+.+....+|..+++.+.+.+.+..||
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 323 FGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 998887 777777777754 55689999999999999999999999999887766
No 172
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.31 E-value=8.8e-11 Score=110.11 Aligned_cols=159 Identities=11% Similarity=-0.025 Sum_probs=101.5
Q ss_pred Hhhhhhhhhh-hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhh----cchhHHHH
Q 015136 42 MILSFIGPAV-KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSA----FSPNYISL 116 (412)
Q Consensus 42 ~~~~~~~~~~-~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~----~~~~~~~~ 116 (412)
+.+....|.+ .+++|.+.++.+...++..++..+++++.|+++||+|||+.+.++.++.++...... ..++....
T Consensus 260 ~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (432)
T PRK10406 260 YTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAA 339 (432)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 3344455655 466899998999999988888899999999999999999988776665443332111 12232222
Q ss_pred HHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHH-HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 015136 117 VTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTL-GSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLL 194 (412)
Q Consensus 117 ~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~ 194 (412)
+..-.+.+++.+.. +....+..|.+|++.|++++|+.+...++ .....|.+.+.+.....|...+++.++..++..+.
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 340 FGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLV 419 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHH
Confidence 22222222333333 44557788999999999999998765554 34447777775544333655666655555555555
Q ss_pred HHhccC
Q 015136 195 YSLAPE 200 (412)
Q Consensus 195 ~~~~~~ 200 (412)
.+++++
T Consensus 420 ~~~l~~ 425 (432)
T PRK10406 420 SLMLHR 425 (432)
T ss_pred HHHhhh
Confidence 445443
No 173
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.29 E-value=1e-10 Score=104.09 Aligned_cols=155 Identities=12% Similarity=0.097 Sum_probs=117.5
Q ss_pred HHHHHHHHHhhHHHhhhhhhhhhhh---hcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 015136 29 YAGLAVFAEAMEIMILSFIGPAVKS---EWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGL 105 (412)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 105 (412)
+..+..+.........+...+.+.+ .+|+++++.++..+.+..+..+|.++.+++.||+|+|+.+.++..+..++.+
T Consensus 144 l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~ 223 (310)
T TIGR01272 144 LGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSI 223 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 3445555555445555555555554 3689999999999999999999999999999999999999888888887776
Q ss_pred HhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 015136 106 LSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALS 184 (412)
Q Consensus 106 ~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~ 184 (412)
+....++.... ..-++.|++.+.. |...+...+..|+ +.+++.++. ....+|.+++|++.+.+.|..|.+..|++.
T Consensus 224 l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~ 300 (310)
T TIGR01272 224 GAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALP 300 (310)
T ss_pred HHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHH
Confidence 66555544333 3555788888887 8888888777764 355666765 566789999999999999999988888754
Q ss_pred HH
Q 015136 185 SI 186 (412)
Q Consensus 185 ~~ 186 (412)
.+
T Consensus 301 ~~ 302 (310)
T TIGR01272 301 VP 302 (310)
T ss_pred HH
Confidence 43
No 174
>PRK10054 putative transporter; Provisional
Probab=99.28 E-value=6.3e-11 Score=109.61 Aligned_cols=142 Identities=13% Similarity=0.012 Sum_probs=116.0
Q ss_pred hhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHhhhcCcc-
Q 015136 53 SEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS-PNYISLVTLRGLVGIGIGSG- 130 (412)
Q Consensus 53 ~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~r~l~G~~~g~~- 130 (412)
++.+.+....+++.+...+.....+++.|++.||+++|+.+..+..+.+++.....+. ++.+.+.+..++.|+|.+..
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 4556667777888888888888888999999999999999999988888887766654 56777777888999998876
Q ss_pred ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 015136 131 PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLY 195 (412)
Q Consensus 131 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~ 195 (412)
|...+.+.+..|++.|++..+..+ ...+|..+||.+++.+.++.|....|++.+....+..+..
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLM 380 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHH
Confidence 777788889999999999988755 5668999999999999999998888888766655554443
No 175
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.28 E-value=7.1e-11 Score=110.95 Aligned_cols=160 Identities=14% Similarity=0.029 Sum_probs=108.3
Q ss_pred hhhhhhhhhhh-hcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHH---HHHHHhhc--chhHHHH
Q 015136 43 ILSFIGPAVKS-EWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITS---GIGLLSAF--SPNYISL 116 (412)
Q Consensus 43 ~~~~~~~~~~~-~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~---i~~~~~~~--~~~~~~~ 116 (412)
......|.+.+ ..|.++.+.++..+.+.++..++.++.|+++||+++++....+..+.. ++...... ..+.+..
T Consensus 269 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (438)
T TIGR00712 269 GVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVD 348 (438)
T ss_pred HHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHH
Confidence 34445565554 579999999999999999999999999999999975432223322221 11121111 2233433
Q ss_pred HHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHH-HHHHHHHHHHHHhcCChHHHHHHHHHHHHHH-HH
Q 015136 117 VTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLG-SIFEAALAWIVMITLNWRWLLALSSIPSFAV-LL 193 (412)
Q Consensus 117 ~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g-~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~-~~ 193 (412)
....++.|++.... ........|.+|+++||+++|+.+....+| .+++|.+.+.+.++.||...+.+.....++. +.
T Consensus 349 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 428 (438)
T TIGR00712 349 MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 428 (438)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 44445555543222 222345679999999999999998887776 5789999999999999999998877665555 44
Q ss_pred HHHhccCCc
Q 015136 194 LYSLAPESP 202 (412)
Q Consensus 194 ~~~~~~~~~ 202 (412)
..+.++|++
T Consensus 429 ~~~~~~~~~ 437 (438)
T TIGR00712 429 LIVVMIGEK 437 (438)
T ss_pred HHHHHhhcc
Confidence 456667654
No 176
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.26 E-value=8.3e-11 Score=109.44 Aligned_cols=159 Identities=15% Similarity=0.118 Sum_probs=110.4
Q ss_pred HHHHHHHHhhHHHhhhhhhhhhhhhc--CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhH-HHHHHHHHHHHHHH
Q 015136 30 AGLAVFAEAMEIMILSFIGPAVKSEW--GVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKG-FLGIAMITSGIGLL 106 (412)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~-~~~~~~~~~i~~~~ 106 (412)
..+.+++.......+....|.+.+++ +.+..+.+...+...++..++.++.|+++||++||+. .....++.+++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~ 326 (412)
T TIGR02332 247 YTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLL 326 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHH
Confidence 34444444555556667788888875 5677888999999999999999999999999998774 33444444444333
Q ss_pred hhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHH
Q 015136 107 SAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN-WRWLLALS 184 (412)
Q Consensus 107 ~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w~~~~~~~ 184 (412)
....++.....++-.+.+++.... +.......|.+|+++|++++|+.+....+|.+++|.+.+.+.+..| |++.+++.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~ 406 (412)
T TIGR02332 327 ASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFV 406 (412)
T ss_pred HHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHH
Confidence 222323222222222333333222 3334555678999999999999999999999999999999998774 99988876
Q ss_pred HHHH
Q 015136 185 SIPS 188 (412)
Q Consensus 185 ~~~~ 188 (412)
++..
T Consensus 407 ~~~~ 410 (412)
T TIGR02332 407 AALL 410 (412)
T ss_pred HHHH
Confidence 6543
No 177
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.26 E-value=2.4e-10 Score=105.67 Aligned_cols=144 Identities=15% Similarity=0.129 Sum_probs=113.8
Q ss_pred hhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH-HHHHHHHhhcchhHHHHHHHHHHHh
Q 015136 46 FIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMI-TSGIGLLSAFSPNYISLVTLRGLVG 124 (412)
Q Consensus 46 ~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~r~l~G 124 (412)
...|.+.+++|.+.++.+...+.+.++..++.++.+++.||.+ |+.++.+..+ .....++....++.+.+.+..++.|
T Consensus 238 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G 316 (394)
T PRK10213 238 YIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWG 316 (394)
T ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3457778889999999999999999999999999999999964 4444444444 3333444455667777888889999
Q ss_pred hhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 015136 125 IGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAV 191 (412)
Q Consensus 125 ~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~ 191 (412)
++.+.. +...+++.+..| ++++++.++.....++|..+|+.+++.+.+..|++..+...+++.++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 317 LTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 998887 666777888776 567788888888889999999999999999999999888877655443
No 178
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.25 E-value=1.3e-10 Score=107.07 Aligned_cols=147 Identities=17% Similarity=0.118 Sum_probs=109.5
Q ss_pred hhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHh
Q 015136 46 FIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSA-FSPNYISLVTLRGLVG 124 (412)
Q Consensus 46 ~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~r~l~G 124 (412)
...|.+.+.+|.++++.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++.. ..++.+...+..++.+
T Consensus 221 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 300 (382)
T PRK10091 221 YIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICC 300 (382)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 344666677899999999999999999999999999999999999999988888887776554 3455555556666666
Q ss_pred hhcCcc-ccce-eeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHH
Q 015136 125 IGIGSG-PVFS-AWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMIT-LNWRWLLALSSIPSFAVLLL 194 (412)
Q Consensus 125 ~~~g~~-~~~~-~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~w~~~~~~~~~~~~~~~~~ 194 (412)
++.... +... ....+..+++.++.+ ..+....+|..+||.+++.+.+. .+|++.+.+.++..++.+..
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 371 (382)
T PRK10091 301 AGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSS 371 (382)
T ss_pred HHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHH
Confidence 665443 3333 333344444555544 34667889999999999999985 68999999987766655443
No 179
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.24 E-value=3.2e-10 Score=105.38 Aligned_cols=147 Identities=14% Similarity=0.162 Sum_probs=106.4
Q ss_pred hhhhhhhcCCCcchhHHHHHHHH-HHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHh---hcc-hhHHHHHHHH--
Q 015136 48 GPAVKSEWGVSPSAESLLSTVVF-AGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLS---AFS-PNYISLVTLR-- 120 (412)
Q Consensus 48 ~~~~~~~~~~s~~~~~~~~s~~~-~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~-~~~~~~~~~r-- 120 (412)
.+.+.+++|.++++.+++.+... ++..++.++.|++.||+|+|+.+..+..+..+..+.. +.. ++.+.+.+.-
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGI 312 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 35567789999999999886654 5689999999999999999998887777666554332 343 4555555444
Q ss_pred --HHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHh
Q 015136 121 --GLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSL 197 (412)
Q Consensus 121 --~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~ 197 (412)
+..|++.+.. .....++.+..|.+.+ +..+...++|..+++.+++.+.++.||+..|.+.++++++..+....
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 3455556665 5666778788776554 44555557777777778999999999999999988877776555433
Q ss_pred c
Q 015136 198 A 198 (412)
Q Consensus 198 ~ 198 (412)
.
T Consensus 389 ~ 389 (402)
T PRK11902 389 M 389 (402)
T ss_pred H
Confidence 3
No 180
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.24 E-value=3.1e-10 Score=105.63 Aligned_cols=144 Identities=16% Similarity=0.071 Sum_probs=111.6
Q ss_pred hhhhh-hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc-----hhHHHHHHHH
Q 015136 47 IGPAV-KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS-----PNYISLVTLR 120 (412)
Q Consensus 47 ~~~~~-~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~r 120 (412)
..|.+ .+++|.++.+.++......++..++.++.|+++||+|+|+.+.++.++..++..+.... .+.+.+.+..
T Consensus 237 ~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
T PRK15402 237 LSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGL 316 (406)
T ss_pred HhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHH
Confidence 34544 56789999999998888888999999999999999999999999888877777665542 3566677788
Q ss_pred HHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 015136 121 GLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAV 191 (412)
Q Consensus 121 ~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~ 191 (412)
++.|++.+.. +....... ..++++||+..+..+....+|..+|+.+.+.+.+..++....+..++..++.
T Consensus 317 ~~~g~g~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 317 SLYAFGIGLANAGLYRLTL-FSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHhhhHHHHHh-hhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 8899988875 44443332 2345899999999999999999999999999988878766555554444444
No 181
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.20 E-value=2.6e-10 Score=102.83 Aligned_cols=159 Identities=11% Similarity=0.038 Sum_probs=131.5
Q ss_pred hhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 015136 44 LSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLV 123 (412)
Q Consensus 44 ~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~ 123 (412)
++.+...+-++-+.+....|.+.+...+.-++...+..++.+|+|.|+.++++..+.++=..+++++++.+.+.+.+.+.
T Consensus 243 f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH 322 (412)
T PF01306_consen 243 FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLH 322 (412)
T ss_dssp HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHH
T ss_pred HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHH
Confidence 34444444444455667789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcc-ccceeeeeecccccchhhHHHH-HHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH-HHHHHhccC
Q 015136 124 GIGIGSG-PVFSAWFLEFVPAAKRGMWMVI-FSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAV-LLLYSLAPE 200 (412)
Q Consensus 124 G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~ 200 (412)
|+-.+.. ....-|+.+.+|+|..++...+ .+.+.++|..+.+.++|.+.|+.|.+..|++.+.+.+.. ++..+.+++
T Consensus 323 ~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 323 ALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecC
Confidence 9999988 7888999999999988888888 578999999999999999999999999999988777665 444555654
Q ss_pred Cc
Q 015136 201 SP 202 (412)
Q Consensus 201 ~~ 202 (412)
++
T Consensus 403 ~~ 404 (412)
T PF01306_consen 403 DK 404 (412)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 182
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.20 E-value=3e-10 Score=105.27 Aligned_cols=150 Identities=19% Similarity=0.101 Sum_probs=115.7
Q ss_pred hhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHh-hhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHh
Q 015136 46 FIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSD-NYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVG 124 (412)
Q Consensus 46 ~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d-r~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G 124 (412)
...|.+.++.+.++.+.+++.+...++...+..+.+++.| |++.|+.+..+.++.+++..+.+..++.+.+.+..++.|
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 308 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFY 308 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4567766676557888899888888777766666666665 567677778888888888877778888887777788888
Q ss_pred hhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC---Ch-HHHHHHHHHHHHHHHHHH
Q 015136 125 IGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITL---NW-RWLLALSSIPSFAVLLLY 195 (412)
Q Consensus 125 ~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~w-~~~~~~~~~~~~~~~~~~ 195 (412)
++.+.. +...+++.|..|+++||+++|+.+....+|..+||.+++.+.++. ++ ...+...++..++..+..
T Consensus 309 ~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (400)
T PRK11646 309 IGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLAL 384 (400)
T ss_pred HHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHH
Confidence 888776 777889999999999999999999999999999999999998863 32 445555455555444433
No 183
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.19 E-value=2.9e-10 Score=103.78 Aligned_cols=134 Identities=13% Similarity=0.021 Sum_probs=105.8
Q ss_pred HhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-cchhHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 015136 42 MILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNY-GRKKGFLGIAMITSGIGLLSAFSPNYISLVTLR 120 (412)
Q Consensus 42 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r 120 (412)
.......|.+.++.|.+..+.+.+.+...++..++.++.|++.||+ +||+.+..+..+.+++.+...+.++..... ..
T Consensus 214 ~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 292 (355)
T TIGR00896 214 YSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WA 292 (355)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HH
Confidence 3444567777788899999999999999999999999999999999 566677788888888777666655433322 45
Q ss_pred HHHhhhcCcc-ccceeeeeecc-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015136 121 GLVGIGIGSG-PVFSAWFLEFV-PAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN 176 (412)
Q Consensus 121 ~l~G~~~g~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 176 (412)
++.|++.+.. +...+.+.+.. ++++++...++.+....+|..++|.+.+.+.++.|
T Consensus 293 ~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 293 LVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6789998887 66666555444 45677899999998889999999999999998765
No 184
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.19 E-value=1.2e-10 Score=107.26 Aligned_cols=150 Identities=19% Similarity=0.099 Sum_probs=105.6
Q ss_pred HHHHHHhhHHHhhhhhhhhh-hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcc-hhHHH-HHH-HHHHHHHHHh
Q 015136 32 LAVFAEAMEIMILSFIGPAV-KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGR-KKGFL-GIA-MITSGIGLLS 107 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~~~-~~~-~~~~i~~~~~ 107 (412)
+..+.............|.+ .+++|.++.+.++..+...++..++.++.|++.||.++ |+... ... ....++....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 302 (379)
T TIGR00881 223 LGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVY 302 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH
Confidence 33333333334444445544 56689999999999999999999999999999998643 33222 211 1222222222
Q ss_pred hc--chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHH
Q 015136 108 AF--SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLL 181 (412)
Q Consensus 108 ~~--~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~ 181 (412)
.. ..+.....+..++.|+..... +....+..|..|+++|+++.|+.+....+|..++|.+.+.+.++.||++.|
T Consensus 303 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 303 WLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred hcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 22 334555556667777655444 555677889999999999999999999999999999999999999998754
No 185
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.18 E-value=5e-10 Score=102.70 Aligned_cols=166 Identities=15% Similarity=0.112 Sum_probs=127.7
Q ss_pred HHHhhHHHhhhhhhhhhhhhcC-CCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc-hh
Q 015136 35 FAEAMEIMILSFIGPAVKSEWG-VSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS-PN 112 (412)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-~~ 112 (412)
+..+.....+..+.+...++.| .+.+..+.+.++..+.-...-...+++..|+|.|++++++.+..++=..+.+.. ++
T Consensus 217 ~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~ 296 (400)
T PF03825_consen 217 FLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDP 296 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3444444555556666677777 777788888888888889999999999999999999999999999888888776 55
Q ss_pred HHHHHH----HHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHH-HHHHHHHHHHHHHHHHHhcCChH------HH
Q 015136 113 YISLVT----LRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFST-FWTLGSIFEAALAWIVMITLNWR------WL 180 (412)
Q Consensus 113 ~~~~~~----~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~~w~------~~ 180 (412)
.+...+ ...+.|+..+.. .....++.+..|++.|+++.+++.. ..++|..+|..++|.+.+++|-+ ..
T Consensus 297 ~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~ 376 (400)
T PF03825_consen 297 WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAV 376 (400)
T ss_pred cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence 444333 345699999998 8889999999999999999999765 57899999999999999987644 44
Q ss_pred HHHHHHHHHHHHH-HHHhccC
Q 015136 181 LALSSIPSFAVLL-LYSLAPE 200 (412)
Q Consensus 181 ~~~~~~~~~~~~~-~~~~~~~ 200 (412)
+.+.+++.++..+ .+++.+|
T Consensus 377 ~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 377 FLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 5555554444433 3444444
No 186
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.18 E-value=3e-10 Score=100.44 Aligned_cols=176 Identities=18% Similarity=0.209 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHH
Q 015136 25 LVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIG 104 (412)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 104 (412)
.+.+++.-..+.++.+ ..+......-.+++|++..+..++....++..++|+++.|+|.||+|.|+++..+.++..+..
T Consensus 254 i~~FLiA~~~~~DGv~-til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~ 332 (438)
T COG2270 254 LVLFLIARFFYIDGVN-TILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAA 332 (438)
T ss_pred hHHHHHHHHHHHhhHH-HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHH
Confidence 3344444444455543 333433444456999999999999999999999999999999999999999999999999988
Q ss_pred HHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHH
Q 015136 105 LLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN-WRWLLA 182 (412)
Q Consensus 105 ~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w~~~~~ 182 (412)
+...+...-..+.+.-.+.|...|.. ...-++.++..|+++-++.+|+++.....+..+||.+.+.+.+..| -|..+.
T Consensus 333 ~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~ 412 (438)
T COG2270 333 LYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVL 412 (438)
T ss_pred HHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHH
Confidence 87777777777777888999999998 8888999999999999999999999999999999999999887543 677766
Q ss_pred HHHHHHHHHHHHHHhccCC
Q 015136 183 LSSIPSFAVLLLYSLAPES 201 (412)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~ 201 (412)
...++..+.++.+..+|++
T Consensus 413 ~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 413 SIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHhhHhhEEeecCC
Confidence 6666666666666666654
No 187
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.18 E-value=6.9e-11 Score=111.10 Aligned_cols=174 Identities=17% Similarity=0.246 Sum_probs=154.6
Q ss_pred HHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc--chhHHHHHHHHHHHH
Q 015136 26 VFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYG--RKKGFLGIAMITSGI 103 (412)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G--rr~~~~~~~~~~~i~ 103 (412)
.+....+...+...........+|.+.++.+.+..+.+.+.++..+...++.++.|+++|+.. ++.+..++.+..+++
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~ 378 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLA 378 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHH
Confidence 455666777777778888888999999999999999999999999999999999999999988 555777888888888
Q ss_pred HHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHH
Q 015136 104 GLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN-WRWLL 181 (412)
Q Consensus 104 ~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w~~~~ 181 (412)
.+.+.+.++++.++..-.+.|++.|.. ......+.|..+.++-..+.|+.....+++.++||++++.+.+..+ |...|
T Consensus 379 ~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f 458 (509)
T KOG2504|consen 379 RLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAF 458 (509)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeeh
Confidence 889999999999999999999999998 5556788899999999999999999999999999999999888776 99999
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 015136 182 ALSSIPSFAVLLLYSLAP 199 (412)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~ 199 (412)
+..++..++....++..+
T Consensus 459 ~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 459 YFCGLCFLLSAVLLLILR 476 (509)
T ss_pred hhcChHHHHHHHHHHHhH
Confidence 999988888777766665
No 188
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.18 E-value=4.1e-10 Score=118.78 Aligned_cols=142 Identities=18% Similarity=0.055 Sum_probs=119.9
Q ss_pred hhhhhhhhcCCCcc-hhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhh
Q 015136 47 IGPAVKSEWGVSPS-AESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGI 125 (412)
Q Consensus 47 ~~~~~~~~~~~s~~-~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~ 125 (412)
..+.+.+++|.+.. +.+++.+...++..+++++.|++.||+++|+.+.++.++.+++.++..+..+.+.+++..++.|+
T Consensus 255 ~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 334 (1146)
T PRK08633 255 FPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGF 334 (1146)
T ss_pred hHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 33455677899998 99999999999999999999999999999999999988888888888888888888888999999
Q ss_pred hcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHH
Q 015136 126 GIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI-TLNWRWLLALSSIPS 188 (412)
Q Consensus 126 ~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~w~~~~~~~~~~~ 188 (412)
+.+.. +...+++.+..|+++||+++|+.+....+|.++++.+++.+.. ..++...+++.+.+.
T Consensus 335 ~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 399 (1146)
T PRK08633 335 SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVT 399 (1146)
T ss_pred HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 99887 7777888999999999999999999999999888888776654 245666666555443
No 189
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.18 E-value=5.5e-10 Score=98.76 Aligned_cols=163 Identities=18% Similarity=0.136 Sum_probs=125.4
Q ss_pred HHHHHHhhHHHhhhhhhh-hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc
Q 015136 32 LAVFAEAMEIMILSFIGP-AVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS 110 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 110 (412)
+.++......-.++..+| .+.++|+.++.+.|...+.+.+...+..+.+|+++||+|.+|++......++++..+....
T Consensus 225 llY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~ 304 (417)
T COG2223 225 LLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLF 304 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHcc
Confidence 334444444445555555 5577899999999999999999999999999999999999999999988888888777655
Q ss_pred -------hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHH
Q 015136 111 -------PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN-WRWLL 181 (412)
Q Consensus 111 -------~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w~~~~ 181 (412)
.+....++.-+..++..|.. ..+..++...+| ++-|.+.|+..+..++|...-|...+...+..| ++..|
T Consensus 305 ~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f 383 (417)
T COG2223 305 LTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAF 383 (417)
T ss_pred ccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHH
Confidence 34444444444455555554 466677777776 588999999999999999999999888888777 88888
Q ss_pred HHHHHHHHHHHHHH
Q 015136 182 ALSSIPSFAVLLLY 195 (412)
Q Consensus 182 ~~~~~~~~~~~~~~ 195 (412)
++.....++..+..
T Consensus 384 ~~~~~~~~~a~v~~ 397 (417)
T COG2223 384 MLLLAFYLVALVLT 397 (417)
T ss_pred HHHHHHHHHHHHHH
Confidence 88877776665543
No 190
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.17 E-value=1.2e-09 Score=101.03 Aligned_cols=137 Identities=22% Similarity=0.235 Sum_probs=99.8
Q ss_pred hhhhhhh-hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc-----hhHHHHHH
Q 015136 45 SFIGPAV-KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS-----PNYISLVT 118 (412)
Q Consensus 45 ~~~~~~~-~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~ 118 (412)
....|.+ .+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+..++.++.... ++...+..
T Consensus 226 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (385)
T TIGR00710 226 FSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIG 305 (385)
T ss_pred HHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 3344544 45789999999999999999999999999999999999999988888877776655443 23444555
Q ss_pred HHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHH-HHHHHHHHHHHHHhcCChHHHHHH
Q 015136 119 LRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTL-GSIFEAALAWIVMITLNWRWLLAL 183 (412)
Q Consensus 119 ~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~w~~~~~~ 183 (412)
..++.|++.+.. +.......|..| ++|+++.++.+..... |.+.++. .+.+.+..+|...+..
T Consensus 306 ~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~-~~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 306 PMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYL-VSLIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHH-HHhccccChHHHHHHH
Confidence 677788888876 666677778776 6899999998777655 4555554 4444444445444433
No 191
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.16 E-value=3.7e-10 Score=99.81 Aligned_cols=169 Identities=21% Similarity=0.188 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHhhHHHhhhhhhhhh-hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh--cchhHHH-HHHHHHH
Q 015136 26 VFAYAGLAVFAEAMEIMILSFIGPAV-KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNY--GRKKGFL-GIAMITS 101 (412)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~--Grr~~~~-~~~~~~~ 101 (412)
.+..++++.+..+..++.+.-..|.+ .|..|.|..+.++..+++-.+...|.+++|+++||+ |||...- +.+++..
T Consensus 253 ~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~ 332 (448)
T COG2271 253 LIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLIT 332 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 46677888888888888888777754 667899999999999999999999999999999997 6666544 4444444
Q ss_pred HHHHHhhcch--hHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHH-HHHHHHHHHHHHHhcCCh
Q 015136 102 GIGLLSAFSP--NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTL-GSIFEAALAWIVMITLNW 177 (412)
Q Consensus 102 i~~~~~~~~~--~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~w 177 (412)
++.+..-.++ |+....+.-++.|+..-+. ........|..|++--|++.|+...+..+ |...+....+++.|.+||
T Consensus 333 ~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW 412 (448)
T COG2271 333 ASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGW 412 (448)
T ss_pred HHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCC
Confidence 4444444444 4577777778888876554 55566778999999999999999999999 888888888999899999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 015136 178 RWLLALSSIPSFAVLLL 194 (412)
Q Consensus 178 ~~~~~~~~~~~~~~~~~ 194 (412)
...|.+..+.+++..++
T Consensus 413 ~g~Fi~~~~~a~l~~ll 429 (448)
T COG2271 413 DGGFIVLSIAALLAILL 429 (448)
T ss_pred cchHHHHHHHHHHHHHH
Confidence 99998887666655433
No 192
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.15 E-value=7.9e-10 Score=102.84 Aligned_cols=155 Identities=21% Similarity=0.198 Sum_probs=118.1
Q ss_pred hhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc-----chhHHHHHHHHHHHHHHHhhcc----hhHHH
Q 015136 45 SFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYG-----RKKGFLGIAMITSGIGLLSAFS----PNYIS 115 (412)
Q Consensus 45 ~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-----rr~~~~~~~~~~~i~~~~~~~~----~~~~~ 115 (412)
....|.+.+++|+++++.....+...+...+ -++.|.++|-+- ||+-++++.++.+++....+.. .+...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 3456888999999999999988888887766 789999999763 5555666777775555544432 35666
Q ss_pred HHHHHHHHhhhcCcc-ccceeeeeeccc--ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 015136 116 LVTLRGLVGIGIGSG-PVFSAWFLEFVP--AAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVL 192 (412)
Q Consensus 116 ~~~~r~l~G~~~g~~-~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~ 192 (412)
..+.-++..+|.... .++-+...|... ++.||...+.......+|.+++..+++.+.+..++|..|.+.+.+..+..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 666777888888887 677788888763 33478888999999999999999999999999999999998887666665
Q ss_pred HHHHhccC
Q 015136 193 LLYSLAPE 200 (412)
Q Consensus 193 ~~~~~~~~ 200 (412)
+..+++.|
T Consensus 169 ~~~~~~~~ 176 (433)
T PF03092_consen 169 IVALFLLE 176 (433)
T ss_pred HHHHHhhh
Confidence 44444433
No 193
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.12 E-value=2.1e-09 Score=99.41 Aligned_cols=141 Identities=14% Similarity=0.029 Sum_probs=109.4
Q ss_pred hhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcC
Q 015136 49 PAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIG 128 (412)
Q Consensus 49 ~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g 128 (412)
+.+.+.+|.++.+.|++.+...++..++++..+++.||.++|+.+..+. +.++...+..+.++.+...+..++.|++.+
T Consensus 230 ~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g 308 (393)
T PRK11195 230 AWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGG 308 (393)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 3455678999999999999999999999999999999999999888775 344444455566677777777888999988
Q ss_pred cc-ccceeeeeecccccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 015136 129 SG-PVFSAWFLEFVPAAK-RGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAV 191 (412)
Q Consensus 129 ~~-~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~ 191 (412)
.. +...+.+.|..|+++ +|++.++.+...++|..++..+.+.+ +..|-|..+.+.++..++.
T Consensus 309 ~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 372 (393)
T PRK11195 309 FFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVA 372 (393)
T ss_pred hhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHH
Confidence 86 666666777766554 79999999999999999999988855 5567666665554433333
No 194
>PRK09848 glucuronide transporter; Provisional
Probab=99.12 E-value=3.7e-09 Score=99.74 Aligned_cols=135 Identities=16% Similarity=0.093 Sum_probs=103.5
Q ss_pred hhhhhhhhh-hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcch--hHHHHHHH
Q 015136 43 ILSFIGPAV-KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSP--NYISLVTL 119 (412)
Q Consensus 43 ~~~~~~~~~-~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~ 119 (412)
......|.+ .+.+|.++...++......++..++.++.+++.||+|+|+.+.++.++.+++.++..+.+ +.+.+++.
T Consensus 246 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 325 (448)
T PRK09848 246 AVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVA 325 (448)
T ss_pred HHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHH
Confidence 333445544 344676665555545555677888999999999999999999999998888877666543 56777777
Q ss_pred HHHHhhhcCcc-ccceeeeeeccccc-------chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 015136 120 RGLVGIGIGSG-PVFSAWFLEFVPAA-------KRGMWMVIFSTFWTLGSIFEAALAWIVMITLNW 177 (412)
Q Consensus 120 r~l~G~~~g~~-~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 177 (412)
.++.|+|.+.. +...+..+|..|.+ ++|...|..+....+|..+++.+.+.+.+..|+
T Consensus 326 ~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 326 LAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88899998887 77777877877643 459999999999999999999999988765554
No 195
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.11 E-value=2.5e-09 Score=97.61 Aligned_cols=163 Identities=15% Similarity=0.125 Sum_probs=108.4
Q ss_pred HHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcch---hHHHH-HHHHHHHHHHHh
Q 015136 32 LAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRK---KGFLG-IAMITSGIGLLS 107 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr---~~~~~-~~~~~~i~~~~~ 107 (412)
+..++.......+....|.+.++.|.+.+ .+...++..+...++ .++++||.+|| +.... ..++.++.....
T Consensus 199 ~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~ 274 (368)
T TIGR00903 199 AILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLAL 274 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 33444444455556678888888888764 565555555555544 47777777643 33332 333344444444
Q ss_pred hcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 015136 108 AFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSI 186 (412)
Q Consensus 108 ~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~ 186 (412)
....+.....+.-.+.|++.... +...++.+|.+|++.|++++|+.+....+|..++|.+.+.+.. +-+..|.+.++
T Consensus 275 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~ 352 (368)
T TIGR00903 275 AFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAI 352 (368)
T ss_pred HHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHH
Confidence 44445444455556677766665 6677889999999999999999999999999999999887763 67777877777
Q ss_pred HHHHHHHHHHhccC
Q 015136 187 PSFAVLLLYSLAPE 200 (412)
Q Consensus 187 ~~~~~~~~~~~~~~ 200 (412)
+.++..+....+++
T Consensus 353 ~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 353 LITIAFAIALLLPN 366 (368)
T ss_pred HHHHHHHHHHhCCC
Confidence 66666554444444
No 196
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.11 E-value=8.8e-08 Score=92.90 Aligned_cols=152 Identities=15% Similarity=0.150 Sum_probs=123.1
Q ss_pred hhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh-hcchhHHHHHHHHHHHHHHHhhcchh--------HHH
Q 015136 45 SFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDN-YGRKKGFLGIAMITSGIGLLSAFSPN--------YIS 115 (412)
Q Consensus 45 ~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~~~~~~~--------~~~ 115 (412)
..+..++.+.+|.+.+....+...+....-+...++|.++|+ +||++.+.++.++..++.++.+++.. ...
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 344456666789999999889999998899999999999995 79999999999999999887765421 233
Q ss_pred HHHHHHHHhhhcCcc-ccceeeeeeccccc---chhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-------ChHHHHHHH
Q 015136 116 LVTLRGLVGIGIGSG-PVFSAWFLEFVPAA---KRGMWMVIFSTFWTLGSIFEAALAWIVMITL-------NWRWLLALS 184 (412)
Q Consensus 116 ~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-------~w~~~~~~~ 184 (412)
.+++-.+..+|.|.. +...+...|.++++ +|-....++..+.++|+++++.+.+++.+.. +|...|.+.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence 567778888899998 99999999988754 3677888899999999999999999987443 699999999
Q ss_pred HHHHHHHHHHHH
Q 015136 185 SIPSFAVLLLYS 196 (412)
Q Consensus 185 ~~~~~~~~~~~~ 196 (412)
++..++.++...
T Consensus 168 ~i~m~ia~lvf~ 179 (654)
T TIGR00926 168 AILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHH
Confidence 887777655543
No 197
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.10 E-value=7e-10 Score=105.88 Aligned_cols=133 Identities=14% Similarity=0.073 Sum_probs=110.6
Q ss_pred Hhhhhhhhhhh-hhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhc----chhHHHH
Q 015136 42 MILSFIGPAVK-SEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAF----SPNYISL 116 (412)
Q Consensus 42 ~~~~~~~~~~~-~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~----~~~~~~~ 116 (412)
.......|.+. +.+|.++.+.++......++..++.++.|++.||+|||+.+.++..+.+++..+..+ ..+.+.+
T Consensus 272 ~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 351 (485)
T TIGR00711 272 YGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAI 351 (485)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHH
Confidence 33344556554 457999999999999999999999999999999999999999999888888876652 2356667
Q ss_pred HHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015136 117 VTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMIT 174 (412)
Q Consensus 117 ~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 174 (412)
....++.|++.+.. +.......+..|+++|+++.++.+....+|..+|+.+.+.+.++
T Consensus 352 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 352 ALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788899998886 55566666788999999999999999999999999999988764
No 198
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.10 E-value=2.1e-09 Score=99.57 Aligned_cols=134 Identities=13% Similarity=0.079 Sum_probs=92.6
Q ss_pred hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCc
Q 015136 50 AVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGS 129 (412)
Q Consensus 50 ~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~ 129 (412)
.+.+++|.++.+.+...+...++..++.++.+++.||+|||+.+..+..+..++.++..+.++.+.....-.+.+.|.+.
T Consensus 229 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 308 (392)
T PRK10473 229 LLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSV 308 (392)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999998888888777766555444444444443333
Q ss_pred c-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 015136 130 G-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPS 188 (412)
Q Consensus 130 ~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~ 188 (412)
. +.. ...+..|.++|+ +......+++..+++.+++.+.+..|+.......+.+.
T Consensus 309 ~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 309 GFGVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred HhHHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 2 221 122334544443 33344456677777888888887778766555544433
No 199
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.10 E-value=8e-10 Score=92.10 Aligned_cols=148 Identities=16% Similarity=0.148 Sum_probs=112.6
Q ss_pred hhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHH-HHhhcchhHHHHHHHHHHHhhhc
Q 015136 49 PAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIG-LLSAFSPNYISLVTLRGLVGIGI 127 (412)
Q Consensus 49 ~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~r~l~G~~~ 127 (412)
..+++.||+|+...+.+.+....-.++.+++.|.++||+|++-..+.+..+..+.. ....+ +.+.=..+..+.|+..
T Consensus 289 ~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsy 366 (459)
T KOG4686|consen 289 MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSY 366 (459)
T ss_pred HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhH
Confidence 46789999999999999999999999999999999999999987776655554433 22222 3334455677888888
Q ss_pred Ccc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC---hHHHHHHH-HHHHHHHHHHHHhc
Q 015136 128 GSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN---WRWLLALS-SIPSFAVLLLYSLA 198 (412)
Q Consensus 128 g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~---w~~~~~~~-~~~~~~~~~~~~~~ 198 (412)
... ......++...|+++.|++.|..+...++|-++.|++++++.++-| |--+|.+. +.+++....+.+.+
T Consensus 367 sllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 367 SLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 777 5567888889999999999999999999999999999999998655 44444443 34444444344333
No 200
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.09 E-value=4.4e-09 Score=98.55 Aligned_cols=145 Identities=21% Similarity=0.291 Sum_probs=119.0
Q ss_pred HHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcch-
Q 015136 33 AVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSP- 111 (412)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~- 111 (412)
..+.............+.+.++.--++...+.+..+..++..++.+++++++||+|+|+.+..+..+.+++.++..+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~ 312 (428)
T PF13347_consen 233 AFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP 312 (428)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh
Confidence 3444444555555556666666433446788888999999999999999999999999999999999999999888776
Q ss_pred -hHHHHHHHHHHHhhhcCcc-ccceeeeeecccc-------cchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 015136 112 -NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPA-------AKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNW 177 (412)
Q Consensus 112 -~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 177 (412)
|.+.+++..++.|++.+.. ....++++|..+. ++.|...|..+....+|..+++.+.+.+.+..|+
T Consensus 313 ~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 313 GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 8999999999999999998 7788999988763 3458889999999999999999999988775553
No 201
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.08 E-value=7e-09 Score=98.38 Aligned_cols=138 Identities=14% Similarity=0.029 Sum_probs=104.1
Q ss_pred HHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhc-----chhHH
Q 015136 40 EIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAF-----SPNYI 114 (412)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~-----~~~~~ 114 (412)
.........+.+.+...-+.+..+++.+...++..++.+++++++||+|+|+.+.++..+.+++.+.... .++.+
T Consensus 246 ~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (473)
T PRK10429 246 ASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNAL 325 (473)
T ss_pred HHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHH
Confidence 3344444555565555445667777778777899999999999999999999999888877666554422 34566
Q ss_pred HHHHHHHHHhhhcCcc-ccceeeeeeccc-------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 015136 115 SLVTLRGLVGIGIGSG-PVFSAWFLEFVP-------AAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNW 177 (412)
Q Consensus 115 ~~~~~r~l~G~~~g~~-~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 177 (412)
.+++.-++.|++.+.. +...++++|..+ .++.|...+.......+|..+++.+.+.+.+..|+
T Consensus 326 ~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 326 LIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6777778888888887 777788888855 33456688999999999999999999998876554
No 202
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.07 E-value=8.2e-09 Score=95.45 Aligned_cols=162 Identities=11% Similarity=-0.039 Sum_probs=104.6
Q ss_pred HHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhh-cc---
Q 015136 35 FAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSA-FS--- 110 (412)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~-~~--- 110 (412)
++.+.....++...|.+.++ +.+.........+..+...+..+++|+++||+|+|+++.++.+...++..... ..
T Consensus 262 ~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~ 340 (462)
T PRK15034 262 LATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGT 340 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33333334455555555444 23333333334455677888899999999999999999988887777664321 11
Q ss_pred --hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccc---------------------cchhhHHHHHHHHHHHHHHHHHH
Q 015136 111 --PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPA---------------------AKRGMWMVIFSTFWTLGSIFEAA 166 (412)
Q Consensus 111 --~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~---------------------~~r~~~~~~~~~~~~~g~~~~~~ 166 (412)
.+++.+.+..+...++.|.. ..+..++.+.+|+ ++-|.+.|+..+...+|..+.|.
T Consensus 341 ~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~ 420 (462)
T PRK15034 341 GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQ 420 (462)
T ss_pred cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhH
Confidence 24555555555544555554 4555666666663 25678889999999999999998
Q ss_pred HHHHHHhc-CChHHHHHHHHHHHHHHH-HHHHh
Q 015136 167 LAWIVMIT-LNWRWLLALSSIPSFAVL-LLYSL 197 (412)
Q Consensus 167 ~~~~l~~~-~~w~~~~~~~~~~~~~~~-~~~~~ 197 (412)
+.+...+. .++...|+...+..++.. +.++.
T Consensus 421 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 421 AFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 77776654 458888887776666554 34444
No 203
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.07 E-value=1.9e-09 Score=113.55 Aligned_cols=143 Identities=15% Similarity=0.079 Sum_probs=115.6
Q ss_pred hhhhh-hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc---------------
Q 015136 47 IGPAV-KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS--------------- 110 (412)
Q Consensus 47 ~~~~~-~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~--------------- 110 (412)
..|.+ .+.+|.++.+.|++.+.+.++..+++++.|+++|+.++++.+..+.++.+++.+...+.
T Consensus 247 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (1140)
T PRK06814 247 QLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSIL 326 (1140)
T ss_pred HhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchh
Confidence 44554 45589999999999999999999999999999998888777666666665555433332
Q ss_pred -----hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-cCChHHHHHH
Q 015136 111 -----PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI-TLNWRWLLAL 183 (412)
Q Consensus 111 -----~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~w~~~~~~ 183 (412)
++.+.+.+..++.|++.+.. +...+++.+..|++.||+++|+.+....+|..+++++.+.+.+ ..++...+++
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~ 406 (1140)
T PRK06814 327 VFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILF 406 (1140)
T ss_pred hhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 67777888889999998887 7788999999999999999999999999999999999998874 4567777665
Q ss_pred HHHHHH
Q 015136 184 SSIPSF 189 (412)
Q Consensus 184 ~~~~~~ 189 (412)
.++..+
T Consensus 407 ~~~~~~ 412 (1140)
T PRK06814 407 IALANL 412 (1140)
T ss_pred HHHHHH
Confidence 554433
No 204
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.06 E-value=1.5e-09 Score=103.49 Aligned_cols=129 Identities=16% Similarity=0.113 Sum_probs=109.0
Q ss_pred hhhhh-hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhc---chhHHHHHHHH
Q 015136 45 SFIGP-AVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAF---SPNYISLVTLR 120 (412)
Q Consensus 45 ~~~~~-~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~r 120 (412)
....| .+++.+|.|+.+.|+......++..++.++.|++.||+|+|+.+..+.++.+++.++... .++.+...+..
T Consensus 279 ~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 358 (495)
T PRK14995 279 ELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLM 358 (495)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 34444 455668999999999999999999999999999999999999999898888877765433 24556667778
Q ss_pred HHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015136 121 GLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI 173 (412)
Q Consensus 121 ~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 173 (412)
++.|+|.|.. +.....+.+..|+++++.+.++.+...++|..+|+.+.+.+.+
T Consensus 359 ~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 359 ALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999987 6677777788999999999999999999999999999998854
No 205
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.06 E-value=4.8e-09 Score=99.52 Aligned_cols=171 Identities=15% Similarity=0.098 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHhhHHHhhhhhhhhh-hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHH--------HHHH
Q 015136 27 FAYAGLAVFAEAMEIMILSFIGPAV-KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGF--------LGIA 97 (412)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~--------~~~~ 97 (412)
+....+..+........+....|.+ .+++|.+..+.++..++..++..++.++.|+++||+++|+.. ..+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 342 (465)
T TIGR00894 263 VWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGI 342 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 3444455555555555555666655 466899999999999999999999999999999998755321 1111
Q ss_pred HHH--HHHHHHhhc-chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015136 98 MIT--SGIGLLSAF-SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI 173 (412)
Q Consensus 98 ~~~--~i~~~~~~~-~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 173 (412)
... ++....... ..+....++.-.+.+.+.+.. +.......|..| +.+|.+.++.+....+|..++|.+.+.+.+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~ 421 (465)
T TIGR00894 343 GGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILS 421 (465)
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeC
Confidence 111 111111122 234444444455555555544 333344456665 589999999999999999999999998876
Q ss_pred cC---ChHHHHHHHHHHHHHHHHHHHhc
Q 015136 174 TL---NWRWLLALSSIPSFAVLLLYSLA 198 (412)
Q Consensus 174 ~~---~w~~~~~~~~~~~~~~~~~~~~~ 198 (412)
.. +|+..|.+.++..++..+...+.
T Consensus 422 ~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 422 QDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 43 38888888887777665554443
No 206
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.05 E-value=9.7e-10 Score=100.42 Aligned_cols=120 Identities=13% Similarity=0.156 Sum_probs=96.6
Q ss_pred hHHHhhhhhhhhhhhhcCCCcchhHHHHHHHH-HHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc-------
Q 015136 39 MEIMILSFIGPAVKSEWGVSPSAESLLSTVVF-AGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS------- 110 (412)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~-~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~------- 110 (412)
..........|.+.+++|.++++.+.+.+... ++..++.+++|++.||+|||+.+..+.++.+++..+..+.
T Consensus 223 ~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
T TIGR00901 223 LGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHD 302 (356)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 33344445566666669999999998887665 6788999999999999999999998888887776654432
Q ss_pred ----hhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHH
Q 015136 111 ----PNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWT 158 (412)
Q Consensus 111 ----~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 158 (412)
++.+.+....++.+++.+.. +...+++.|.+|+++||+.+|+.++..+
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 303 GITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 34567777888999999987 8889999999999999999999887654
No 207
>PRK10133 L-fucose transporter; Provisional
Probab=99.05 E-value=3.5e-09 Score=99.22 Aligned_cols=137 Identities=11% Similarity=0.033 Sum_probs=109.4
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-
Q 015136 52 KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG- 130 (412)
Q Consensus 52 ~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~- 130 (412)
.+.+|.++.+.++..+.+.++..++.++.+++.||+|+|+++..+..+.+++..+..+.++.. .+..-.+.|++.+..
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~ 365 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQY 365 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999999999988887777666655555543 245567889999998
Q ss_pred ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHHH
Q 015136 131 PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN-WRWLLALSSIPSFAV 191 (412)
Q Consensus 131 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w~~~~~~~~~~~~~~ 191 (412)
|...+...|..|+ +.+.+.++... ..+|..++|.+.+.+.+..| -|..|++..+..+..
T Consensus 366 P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~ 425 (438)
T PRK10133 366 PTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVI 425 (438)
T ss_pred HHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 8888888888764 46777887764 44688889999999999887 788887655544443
No 208
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.03 E-value=1.2e-08 Score=94.06 Aligned_cols=119 Identities=16% Similarity=0.042 Sum_probs=83.0
Q ss_pred hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhh---c-chhHHHHHHHHHHHhh
Q 015136 50 AVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSA---F-SPNYISLVTLRGLVGI 125 (412)
Q Consensus 50 ~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~---~-~~~~~~~~~~r~l~G~ 125 (412)
.+.+++|.++.+.++..+...++..++.++.|++.||+|||+.+..+..+..+..+... . ..+.+...+...+.+.
T Consensus 220 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (377)
T PRK11102 220 VYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVG 299 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 45566899999999999999999999999999999999999999888876554433222 1 2244444444444444
Q ss_pred hcCcc-ccceeeeeecccccchhhHHHHHHHH-HHHHHHHHHHHHH
Q 015136 126 GIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTF-WTLGSIFEAALAW 169 (412)
Q Consensus 126 ~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~ 169 (412)
+.+.. ......+.|..| ++++++.++.+.. ..+|..+++.++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 300 CVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44443 444455667666 7899999886543 4566666666544
No 209
>PRK11043 putative transporter; Provisional
Probab=99.01 E-value=9.5e-09 Score=95.51 Aligned_cols=134 Identities=16% Similarity=0.093 Sum_probs=100.0
Q ss_pred hhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHh---hc--chhHHHHHHH
Q 015136 45 SFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLS---AF--SPNYISLVTL 119 (412)
Q Consensus 45 ~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~--~~~~~~~~~~ 119 (412)
....|.+.+++|.++.+.++......++..++.+..+++.||+|+|+....+....+++.+.. .. .++.+..++.
T Consensus 223 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (401)
T PRK11043 223 LTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIP 302 (401)
T ss_pred HHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 344677778899999999998888889999999999999999999987766655554443322 11 3455555566
Q ss_pred HHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHH
Q 015136 120 RGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRW 179 (412)
Q Consensus 120 r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~ 179 (412)
..+.|++.+.. +.......|..| ++||++.++.+.....+...++.+.+.+.+......
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 303 FCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHH
Confidence 67778887776 666666666665 689999999998888888888888888876443333
No 210
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.00 E-value=2.6e-09 Score=97.34 Aligned_cols=126 Identities=28% Similarity=0.389 Sum_probs=106.9
Q ss_pred HHHhhhhhhhhh-hhhcCCC-cchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcch---hHH
Q 015136 40 EIMILSFIGPAV-KSEWGVS-PSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSP---NYI 114 (412)
Q Consensus 40 ~~~~~~~~~~~~-~~~~~~s-~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~---~~~ 114 (412)
.........|.+ .+++|.+ ..+.+...+...++..++.++.|++.||+|+|+..........++.+...... +..
T Consensus 221 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
T PF07690_consen 221 VFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPV 300 (352)
T ss_dssp HHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHH
T ss_pred HHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 344466666765 8889999 78999999999999999999999999999998888887777777776665543 456
Q ss_pred HHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHH
Q 015136 115 SLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEA 165 (412)
Q Consensus 115 ~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 165 (412)
..++..++.|++.+.. +...+++.|..|+++||++.|+.+...++|..++|
T Consensus 301 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 301 WLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 6777888899988887 88889999999999999999999999999999987
No 211
>PRK09669 putative symporter YagG; Provisional
Probab=99.00 E-value=7.6e-09 Score=97.45 Aligned_cols=130 Identities=15% Similarity=0.092 Sum_probs=96.3
Q ss_pred hhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhh-c-chhHHHHHHHHHHHhh
Q 015136 48 GPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSA-F-SPNYISLVTLRGLVGI 125 (412)
Q Consensus 48 ~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~-~-~~~~~~~~~~r~l~G~ 125 (412)
.+.+.++.--+++..+.+.....+...++.+++++++||+|+|+.+..+.++.++..+... . .++.+.+++..++.|+
T Consensus 252 ~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~ 331 (444)
T PRK09669 252 TLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNF 331 (444)
T ss_pred hheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHH
Confidence 3444333322334445566667788888999999999999999999988876665443222 2 3567777888889999
Q ss_pred hcCcc-ccceeeeeeccc-------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 015136 126 GIGSG-PVFSAWFLEFVP-------AAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNW 177 (412)
Q Consensus 126 ~~g~~-~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 177 (412)
+.+.. +...++++|..+ .++.|...+.......+|..+|+.+++.+.+..|+
T Consensus 332 ~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 332 IQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99987 777888888775 23346778899999999999999999998886665
No 212
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.97 E-value=1.4e-08 Score=87.96 Aligned_cols=132 Identities=16% Similarity=0.116 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchh
Q 015136 69 VFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRG 147 (412)
Q Consensus 69 ~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~ 147 (412)
..+.-.-|.++.+.+.||+|||+.+..+.+++++..++...+.+-..+.+..+..-+..... .+.+.|..|.+|.+.|+
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhh
Confidence 34556678899999999999999999999999999987766654333333333333333333 68889999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhccCCc
Q 015136 148 MWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSLAPESP 202 (412)
Q Consensus 148 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (412)
.+.|.......+|+++.|+++ +.....-..+..+.+.+.++..++..++|-.+
T Consensus 470 tgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 999999999999999999999 33323334455566666666666666776443
No 213
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.94 E-value=2.2e-08 Score=89.22 Aligned_cols=154 Identities=29% Similarity=0.380 Sum_probs=124.1
Q ss_pred HHhhHHHhhhhhhhhhhhhcCCCc--chhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchh-
Q 015136 36 AEAMEIMILSFIGPAVKSEWGVSP--SAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPN- 112 (412)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~- 112 (412)
....+........+.+..+++.+. ...++..+.+.++..++.++.|.+.||+|||+.+..+.....++.+...+..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (338)
T COG0477 13 LLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNV 92 (338)
T ss_pred HHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccc
Confidence 333555666677888888887766 48899999999999999999999999999998888888766666666666665
Q ss_pred -HHHHHHHHHHHhhhcCcc-ccceeeeeecccc-cchhhHHHHHHH-HHHHHHHHHHHHHHHHHhc--CChHHHHHHHHH
Q 015136 113 -YISLVTLRGLVGIGIGSG-PVFSAWFLEFVPA-AKRGMWMVIFST-FWTLGSIFEAALAWIVMIT--LNWRWLLALSSI 186 (412)
Q Consensus 113 -~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~--~~w~~~~~~~~~ 186 (412)
.+.+.+.|++.|++.+.. +...+++.|..|+ ++|+...+.... ...+|..+++.+++.+... .+||..|.....
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAAL 172 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 889999999999999877 8888999999987 688999998888 6888888988777776654 679986665554
Q ss_pred HHH
Q 015136 187 PSF 189 (412)
Q Consensus 187 ~~~ 189 (412)
...
T Consensus 173 ~~~ 175 (338)
T COG0477 173 LGL 175 (338)
T ss_pred HHH
Confidence 443
No 214
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.86 E-value=8.6e-08 Score=90.75 Aligned_cols=133 Identities=13% Similarity=0.071 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcc-----hhHH--HHHHHHHHHHHHHhhc---------chhHHHHHHHHHHHhh
Q 015136 62 ESLLSTVVFAGNLVGVYLWGLLSDNYGR-----KKGF--LGIAMITSGIGLLSAF---------SPNYISLVTLRGLVGI 125 (412)
Q Consensus 62 ~~~~~s~~~~~~~i~~~~~g~l~dr~Gr-----r~~~--~~~~~~~~i~~~~~~~---------~~~~~~~~~~r~l~G~ 125 (412)
.+++.++..+...+.+++..++-.|.+| +... .+|.++.+++....++ ..|++.++...++.|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 6788888888888888886654444443 3333 7788888888776653 4689999999999999
Q ss_pred hcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 015136 126 GIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLL 194 (412)
Q Consensus 126 ~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~ 194 (412)
|.... |...+++.+..|++.||+.+|++.....+|..+++.+.....+..+|...|...++..++..+.
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVV 463 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHH
Confidence 99998 9999999999999999999999999999999999999888777778988888877766655443
No 215
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.84 E-value=2.3e-08 Score=68.24 Aligned_cols=81 Identities=16% Similarity=0.161 Sum_probs=75.2
Q ss_pred HhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHH
Q 015136 37 EAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISL 116 (412)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 116 (412)
.+.++..+++.+|.+++|.++|.++.|++.+..++||.+|++...++.++..+++.+..+.+...+..+.+++.++.+.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 46788899999999999999999999999999999999999999999999888999999999999999999998887765
Q ss_pred H
Q 015136 117 V 117 (412)
Q Consensus 117 ~ 117 (412)
.
T Consensus 84 ~ 84 (85)
T PF06779_consen 84 S 84 (85)
T ss_pred h
Confidence 3
No 216
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.83 E-value=5.3e-07 Score=82.60 Aligned_cols=143 Identities=22% Similarity=0.237 Sum_probs=109.9
Q ss_pred HHHHhhHHHhhhhhhhhhhhh-cCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcch-
Q 015136 34 VFAEAMEIMILSFIGPAVKSE-WGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSP- 111 (412)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~- 111 (412)
.++......+.+....++.+. +|.+..+..+.......+..++.+++.++++|+|+|+++.++.++.+++.++..+.+
T Consensus 245 ~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~ 324 (467)
T COG2211 245 NLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPA 324 (467)
T ss_pred HHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcC
Confidence 333333444444444444333 455666667778888888888899999999999999999999999999998887765
Q ss_pred -hHHHHHHHHHHHhhhcCcc-ccceeeeeeccc-------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015136 112 -NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVP-------AAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN 176 (412)
Q Consensus 112 -~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 176 (412)
+.+..++..++.++|.+.. +...++++|..+ .++-|...+......-+|.+++..+.+++.+..|
T Consensus 325 ~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 325 GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 7888888899999999998 777788887643 2334777788888888999999988888876555
No 217
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.83 E-value=1.1e-07 Score=88.21 Aligned_cols=128 Identities=16% Similarity=0.159 Sum_probs=93.6
Q ss_pred hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHH-HHHHHhhc--chhHHHHHHHHHHHhhh
Q 015136 50 AVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITS-GIGLLSAF--SPNYISLVTLRGLVGIG 126 (412)
Q Consensus 50 ~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~-i~~~~~~~--~~~~~~~~~~r~l~G~~ 126 (412)
.+.+.+|.++.+.++......++..+++++.+++.||++++........... +....... ..+.+.+.+..++.|++
T Consensus 233 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 312 (394)
T PRK11652 233 LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFG 312 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 3344489999999999999999999999999999999984433322222222 11111111 23556677778889999
Q ss_pred cCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 015136 127 IGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWR 178 (412)
Q Consensus 127 ~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 178 (412)
.+.. +...++..|..| +++|.+.++.+....+|..+++.+++.+.+...+.
T Consensus 313 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 364 (394)
T PRK11652 313 AGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFS 364 (394)
T ss_pred HHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCchHH
Confidence 8887 778888888876 67899999999999999999999988876553333
No 218
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.83 E-value=7.4e-08 Score=89.46 Aligned_cols=140 Identities=10% Similarity=-0.011 Sum_probs=101.8
Q ss_pred hhhhhhhhhhc--CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 015136 45 SFIGPAVKSEW--GVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGL 122 (412)
Q Consensus 45 ~~~~~~~~~~~--~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 122 (412)
....+.+.++. +.+....+...+.+..+..+|.++.+++.||+++|+++.+...+.++..++....++... ...-++
T Consensus 252 ~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~ 330 (410)
T TIGR00885 252 WTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTL 330 (410)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHH
Confidence 34455554544 334444455667777888999999999999999999999998888888888877766544 455666
Q ss_pred HhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC------ChHHHHHHHHHH
Q 015136 123 VGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITL------NWRWLLALSSIP 187 (412)
Q Consensus 123 ~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------~w~~~~~~~~~~ 187 (412)
.|++.+.. |...+...+..+++.+..+.++... .+|.+++|++.+.+.|.. +.+..|++..+.
T Consensus 331 ~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 331 CSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC 400 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence 77777776 8888888888876654334444333 399999999999999953 477777765443
No 219
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.82 E-value=3.3e-07 Score=87.93 Aligned_cols=178 Identities=16% Similarity=0.092 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHH
Q 015136 24 YLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGI 103 (412)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 103 (412)
......+.+..+.+..+.+....+.+.+.+..|.+... .+...+..+...++..++..+.||+|||+.++.+...+.++
T Consensus 294 ~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~ 372 (513)
T KOG0254|consen 294 KRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSIC 372 (513)
T ss_pred HHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHH
Confidence 33444555555666666677778889999998887554 55566677777788888899999999999999999999999
Q ss_pred HHHhhcchh--------------HHHHHHHHHHHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 015136 104 GLLSAFSPN--------------YISLVTLRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAW 169 (412)
Q Consensus 104 ~~~~~~~~~--------------~~~~~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 169 (412)
.++.+.... .......-++..+..+..++...+.+|.+|.+.|+++.++......+...+-.....
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~ 452 (513)
T KOG0254|consen 373 LVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFP 452 (513)
T ss_pred HHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 987764321 111223334445555555777788999999999999999988777776665555555
Q ss_pred HHHhcCChHHHHHHHHHHHHHH-H-HHHHhccCCc
Q 015136 170 IVMITLNWRWLLALSSIPSFAV-L-LLYSLAPESP 202 (412)
Q Consensus 170 ~l~~~~~w~~~~~~~~~~~~~~-~-~~~~~~~~~~ 202 (412)
.+.+..++...|...+....+. . ...+++||+.
T Consensus 453 ~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 453 FITEALGIGGTFGYFGGICLLSLIIFVFFFVPETK 487 (513)
T ss_pred HHHHhccccchHHHHHHHHHHHHHHHheEEcccCC
Confidence 5555444445555554444433 4 4677789984
No 220
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.81 E-value=3.2e-08 Score=93.41 Aligned_cols=148 Identities=16% Similarity=0.130 Sum_probs=118.5
Q ss_pred hhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc----------hhHHHHHHHHHH
Q 015136 53 SEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS----------PNYISLVTLRGL 122 (412)
Q Consensus 53 ~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~r~l 122 (412)
+.+|.++.+.|.+.+...++..++....+++.+|++.|+++.++.++.+++....... ++.+.+...-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 5689999999999999999999999999999999999999999999999887554211 333345556778
Q ss_pred HhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----hHHHHHHHH---HHHHHHHH
Q 015136 123 VGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN-----WRWLLALSS---IPSFAVLL 193 (412)
Q Consensus 123 ~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-----w~~~~~~~~---~~~~~~~~ 193 (412)
.+++.+.. .....++.+..|++++|+..++..+..++|..+++.+++.+.++.| ++..+.... +..++.+.
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~ 440 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLP 440 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence 88888887 7778999999999999999999999999999999999999988776 544443332 33333344
Q ss_pred HHHhccC
Q 015136 194 LYSLAPE 200 (412)
Q Consensus 194 ~~~~~~~ 200 (412)
...++|+
T Consensus 441 ~~~llP~ 447 (468)
T TIGR00788 441 LLHLLPR 447 (468)
T ss_pred HHHhCCC
Confidence 4456775
No 221
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.81 E-value=6.1e-06 Score=75.78 Aligned_cols=104 Identities=16% Similarity=0.097 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeeccccc
Q 015136 66 STVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAA 144 (412)
Q Consensus 66 ~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~ 144 (412)
.++-+..+.+++++++.+.|+.|.|..+.++......-.+..-+ .|-+.+++...+.|+|.+.. ..-..+++|...++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 77888899999999999999999999999999988877665544 56777888999999999998 67779999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHH
Q 015136 145 KRGMWMVIFSTFWTLGSIFEAALAWI 170 (412)
Q Consensus 145 ~r~~~~~~~~~~~~~g~~~~~~~~~~ 170 (412)
.+.+-.++.-+....+.++|..+...
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 99999999888888888877655444
No 222
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.80 E-value=1.1e-07 Score=90.68 Aligned_cols=130 Identities=14% Similarity=0.063 Sum_probs=98.8
Q ss_pred hHHHHHHHHHHHHHHHHHH----HHHHhhhcchhHHHHHHHHHHHHHHHhhcchh---------HHHHHHHHHHHhhhcC
Q 015136 62 ESLLSTVVFAGNLVGVYLW----GLLSDNYGRKKGFLGIAMITSGIGLLSAFSPN---------YISLVTLRGLVGIGIG 128 (412)
Q Consensus 62 ~~~~~s~~~~~~~i~~~~~----g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~---------~~~~~~~r~l~G~~~g 128 (412)
.+++.++..+...+..++. +++.||++.++.+.+|.++.+++.+..+...+ .+.++...++.|+|.+
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5677777777777776666 55566666667889999999999888766554 4678889999999999
Q ss_pred cc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh----------cCChHHHHHHHHHHHHHH
Q 015136 129 SG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI----------TLNWRWLLALSSIPSFAV 191 (412)
Q Consensus 129 ~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----------~~~w~~~~~~~~~~~~~~ 191 (412)
.. |...+++.+..|++.||+++|.+.....+|..++..+...... ..+.+..|...++..++.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 471 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVI 471 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHH
Confidence 98 9999999999999999999999888877777777666643211 123667777777665544
No 223
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.79 E-value=1.3e-08 Score=90.82 Aligned_cols=147 Identities=14% Similarity=0.107 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHh----hhcchhHHHH-HHHH
Q 015136 25 LVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSD----NYGRKKGFLG-IAMI 99 (412)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d----r~Grr~~~~~-~~~~ 99 (412)
+.++.++...+...+++..--.+.+++..+.|++....+.+=-...+...+.+|+.|..+| ||||||.++. +.+.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 3333444444445555555556778888999999988888777777888889999999999 5898887664 5555
Q ss_pred HHHHHHHhhcchhH-----------------HHHHHHHHHHhhhcCcc-ccceeeeeecccccchhh-HHHHHHHHHHHH
Q 015136 100 TSGIGLLSAFSPNY-----------------ISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGM-WMVIFSTFWTLG 160 (412)
Q Consensus 100 ~~i~~~~~~~~~~~-----------------~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~g 160 (412)
.+++.++..++.++ ..++++-.+.=++.... ..+-+++.|...++++.+ +.+.+.....+|
T Consensus 112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhc
Confidence 66666666665432 23444455555555566 677789999987777666 999999999999
Q ss_pred HHHHHHHHHHH
Q 015136 161 SIFEAALAWIV 171 (412)
Q Consensus 161 ~~~~~~~~~~l 171 (412)
..+|..+++++
T Consensus 192 nvLGY~~g~y~ 202 (498)
T KOG0637|consen 192 NVLGYALGSYL 202 (498)
T ss_pred ceeeeeccccc
Confidence 99988888743
No 224
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.78 E-value=1.6e-05 Score=73.06 Aligned_cols=302 Identities=16% Similarity=0.084 Sum_probs=163.2
Q ss_pred HHHHHHHHHhhHHHhhhhhhhhhhhhcCC-CcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHh
Q 015136 29 YAGLAVFAEAMEIMILSFIGPAVKSEWGV-SPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLS 107 (412)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 107 (412)
.+....+....+.-++....+.+..+..- +---.+...-.-.+...+.++..|.+.||..|.++...+.+..-++..+.
T Consensus 6 ~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s 85 (432)
T PF06963_consen 6 RLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAAS 85 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHH
Confidence 34556666777777777777777666632 22223344444556677888999999999999998877765554333222
Q ss_pred hc------c--h-----h--HHHHHHHHHHHhhhcCccccc--eeeeeec----c--cccchhhHHHHHHHHHHHHHHHH
Q 015136 108 AF------S--P-----N--YISLVTLRGLVGIGIGSGPVF--SAWFLEF----V--PAAKRGMWMVIFSTFWTLGSIFE 164 (412)
Q Consensus 108 ~~------~--~-----~--~~~~~~~r~l~G~~~g~~~~~--~~~i~~~----~--~~~~r~~~~~~~~~~~~~g~~~~ 164 (412)
+. . . + ...+++.-.+.|.-.-..... .+.=.|| . +++.+.+..+...-.--+..+++
T Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~cklla 165 (432)
T PF06963_consen 86 CALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLA 165 (432)
T ss_pred HHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 11 0 1 1 111222222222221111111 2222344 2 34556677777777777889999
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHH-HHhc----cCCchhhhhcCChHHHHHHHHHHHHhhCCCCCCCccccccC
Q 015136 165 AALAWIVMITLNWRWLLALSSIPSFAVLLL-YSLA----PESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDAT 239 (412)
Q Consensus 165 ~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (412)
|++.+.+.+..+.+....+.+...++..+. ++++ ...|. +..+++.++. +
T Consensus 166 Pl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~-L~~~~~~~~~------------------------~ 220 (432)
T PF06963_consen 166 PLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPA-LAVKKRSSES------------------------E 220 (432)
T ss_pred HHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-hcCCCCCccc------------------------c
Confidence 999999999889888777777666665443 2222 11221 1001100000 0
Q ss_pred CCCCcccCCCCCCCcccchhhhhhhhcccccchhhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccc
Q 015136 240 SRPDEELAPPDNTPLLTSSRIRITKLKSGFSSFLLLFSSRLVRTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTL 319 (412)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (412)
.+.+++ +..+........+.-.+..+.....|+..++.+.+...+...+.++. .+++ ......|..
T Consensus 221 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~T-VLsf---~~lmt~yl~--------- 286 (432)
T PF06963_consen 221 SSSDEE-SSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFT-VLSF---GGLMTAYLK--------- 286 (432)
T ss_pred cccccc-ccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHH-HhcC---cHHHHHHHH---------
Confidence 000000 00000000000010011112223355555665555544444444443 2222 222333332
Q ss_pred ccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 015136 320 TVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFIC 371 (412)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~ 371 (412)
..|+++...+..-....+.++.|.++..++.+|+|..+.-+.+.....++
T Consensus 287 --~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~ 336 (432)
T PF06963_consen 287 --SQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVC 336 (432)
T ss_pred --HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHH
Confidence 24799999999999999999999999999999999877777666644433
No 225
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.78 E-value=3e-08 Score=88.57 Aligned_cols=179 Identities=19% Similarity=0.062 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHH----HHH-----HHHHHHHHHHHHHHHHHhhhcchhHHHH
Q 015136 25 LVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESL----LST-----VVFAGNLVGVYLWGLLSDNYGRKKGFLG 95 (412)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~----~~s-----~~~~~~~i~~~~~g~l~dr~Grr~~~~~ 95 (412)
+.++..+..+|..-...+..+.....+.++.|+.+.+... -.+ +-..++..|-.+...+.|++|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 5677778888888788888888889999988886655443 111 1222333355667789999999999999
Q ss_pred HHHHHHHHHHHhhcchh----HHHHHHHHHHHhhhcCcc--ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 015136 96 IAMITSGIGLLSAFSPN----YISLVTLRGLVGIGIGSG--PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAW 169 (412)
Q Consensus 96 ~~~~~~i~~~~~~~~~~----~~~~~~~r~l~G~~~g~~--~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 169 (412)
|.+++++..+..+...| -..+++...+..+..... .....+-+|.+|.+.|+.+-|+..+..-.|++++.....
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 99999999988877655 222333333333333332 455577789999999999999999999999999999999
Q ss_pred HHHh-----cCChHHHHHHHHHHHHHHHHHHHhccCCch
Q 015136 170 IVMI-----TLNWRWLLALSSIPSFAVLLLYSLAPESPR 203 (412)
Q Consensus 170 ~l~~-----~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (412)
++.+ ..+.|+.+++.+.+..+..+.-+++||+.+
T Consensus 464 ~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 464 YLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred HhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence 9998 788999999999999888888888898754
No 226
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.77 E-value=3.8e-07 Score=79.40 Aligned_cols=158 Identities=16% Similarity=0.141 Sum_probs=123.3
Q ss_pred HHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-cchhHHHHHHHHHHHHHHHhhcchhHH
Q 015136 36 AEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNY-GRKKGFLGIAMITSGIGLLSAFSPNYI 114 (412)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~~~~ 114 (412)
.+.+..++.-..+|.+..|.|+|..+.|++.+...+.....++....+.+|. .+|+..+....++.++.+.+.+.+...
T Consensus 219 lqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~ 298 (395)
T COG2807 219 LQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQL 298 (395)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhH
Confidence 3444456666788999999999999999999999999999999999999965 466677777777777777776665443
Q ss_pred HHHHHHHHHhhhcCcc-ccceeeeeeccc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHH
Q 015136 115 SLVTLRGLVGIGIGSG-PVFSAWFLEFVP-AAKRGMWMVIFSTFWTLGSIFEAALAWIVMITL-NWRWLLALSSIPSFAV 191 (412)
Q Consensus 115 ~~~~~r~l~G~~~g~~-~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~w~~~~~~~~~~~~~~ 191 (412)
.+.- -++.|+|.|.. +.....+.+... +++-++-.++.+....+=..+||.+.|++.|.. +|+..++......+..
T Consensus 299 ~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m 377 (395)
T COG2807 299 PILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLM 377 (395)
T ss_pred HHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHH
Confidence 3333 48999999988 888888887765 445566667778877777889999999999854 5998888777666655
Q ss_pred HHH
Q 015136 192 LLL 194 (412)
Q Consensus 192 ~~~ 194 (412)
.+.
T Consensus 378 ~i~ 380 (395)
T COG2807 378 LIF 380 (395)
T ss_pred HHH
Confidence 444
No 227
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.76 E-value=3.5e-06 Score=78.31 Aligned_cols=144 Identities=15% Similarity=0.062 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCC-----CcchhHHHHHHHHHHHHHH-HHHHHHHHhhhcchhHHHHHHHH
Q 015136 26 VFAYAGLAVFAEAMEIMILSFIGPAVKSEWGV-----SPSAESLLSTVVFAGNLVG-VYLWGLLSDNYGRKKGFLGIAMI 99 (412)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----s~~~~~~~~s~~~~~~~i~-~~~~g~l~dr~Grr~~~~~~~~~ 99 (412)
.++...+..++..++.+ .+-++.|.+.+ +.+.+.++-+...+...+. .++.+++++|++|++++-+....
T Consensus 8 k~~~~~l~fF~il~~Y~----iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~ 83 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYT----ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISP 83 (472)
T ss_pred HHHHHHHHHHHHHHHHH----HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHH
Confidence 34444444555444443 34566677655 3357888888887777776 89999999999999988877666
Q ss_pred HHHHHHHhhcc-----h--------------------------hHHHHHHHHHHHhhhcCcc-c-cceeeeeecccccch
Q 015136 100 TSGIGLLSAFS-----P--------------------------NYISLVTLRGLVGIGIGSG-P-VFSAWFLEFVPAAKR 146 (412)
Q Consensus 100 ~~i~~~~~~~~-----~--------------------------~~~~~~~~r~l~G~~~g~~-~-~~~~~i~~~~~~~~r 146 (412)
+.....+.++. + +.|...+..+...+-.... . .-..+++|.+..++-
T Consensus 84 F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qa 163 (472)
T TIGR00769 84 FLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEA 163 (472)
T ss_pred HHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 66665554432 1 1223333333333333333 3 556889999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015136 147 GMWMVIFSTFWTLGSIFEAALAWIVMI 173 (412)
Q Consensus 147 ~~~~~~~~~~~~~g~~~~~~~~~~l~~ 173 (412)
.|-.+++..+.++|.++++.+..++.+
T Consensus 164 kRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 164 KRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888873
No 228
>PRK11462 putative transporter; Provisional
Probab=98.74 E-value=3.9e-07 Score=85.99 Aligned_cols=130 Identities=18% Similarity=0.085 Sum_probs=85.0
Q ss_pred hhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHHhh
Q 015136 48 GPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSP--NYISLVTLRGLVGI 125 (412)
Q Consensus 48 ~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~r~l~G~ 125 (412)
...+.+...-++...+.+.+.+.++..++.+++++++||+|+|+.+..+..+.++..++..+.+ +...+++.-++.|+
T Consensus 251 ~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 330 (460)
T PRK11462 251 MMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGV 330 (460)
T ss_pred hhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH
Confidence 3333333333344556677788889999999999999999999988766554444333333322 23334445566777
Q ss_pred hcCcc-ccceeeeeeccc-------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 015136 126 GIGSG-PVFSAWFLEFVP-------AAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNW 177 (412)
Q Consensus 126 ~~g~~-~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 177 (412)
+.+.. +...++++|..+ .++.|...+.......+|..+++.+++.+.+..|+
T Consensus 331 ~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 331 LHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 76665 444556665544 23335556777788999999999999988765454
No 229
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.71 E-value=1.6e-06 Score=77.34 Aligned_cols=147 Identities=18% Similarity=0.172 Sum_probs=121.7
Q ss_pred hhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHh-hhcchhHHHHHHHHHHHHHHHh---hcchhHHHHHHHHHHHh
Q 015136 49 PAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSD-NYGRKKGFLGIAMITSGIGLLS---AFSPNYISLVTLRGLVG 124 (412)
Q Consensus 49 ~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d-r~Grr~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~r~l~G 124 (412)
|+=.+-||++..+...+++.+..|..++....|++.. |.++|+.-.+|+...+++..+. +..++.+.+...-++.|
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 4556779999999999999999999999999998887 7888888888888888887654 44567889999999999
Q ss_pred hhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc----------CChHHHHHHHHHHHHHHHH
Q 015136 125 IGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMIT----------LNWRWLLALSSIPSFAVLL 193 (412)
Q Consensus 125 ~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----------~~w~~~~~~~~~~~~~~~~ 193 (412)
++.|.. ....+.+.+...+++.|..+|.+.....++..++..+++.+.|. .+|-.+|.+.++..++.++
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 999998 66678888999999999999999999999999999999987652 2466677777666555544
Q ss_pred HH
Q 015136 194 LY 195 (412)
Q Consensus 194 ~~ 195 (412)
+.
T Consensus 393 ll 394 (403)
T PF03209_consen 393 LL 394 (403)
T ss_pred HH
Confidence 43
No 230
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.67 E-value=4.2e-08 Score=89.35 Aligned_cols=152 Identities=14% Similarity=0.089 Sum_probs=133.6
Q ss_pred hhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhh
Q 015136 46 FIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGI 125 (412)
Q Consensus 46 ~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~ 125 (412)
..+=.-.||++-.+..-|........|-.+.-++.+++.+|+|+-+++..++....+=.+..+..+|.|+.+...+++|+
T Consensus 392 tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgi 471 (618)
T KOG3762|consen 392 TFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGI 471 (618)
T ss_pred HHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHH
Confidence 33334467788788888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred hcCcc-ccceeeeeecccccchhhHHHHH-HHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHh
Q 015136 126 GIGSG-PVFSAWFLEFVPAAKRGMWMVIF-STFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSL 197 (412)
Q Consensus 126 ~~g~~-~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~ 197 (412)
..+.. ..+.+|++...||+.|..+.++. ....++|-.+|.++++.+.+.+|-|..|.+.++.+++.++....
T Consensus 472 t~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 472 THALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 99998 88899999999999999999985 46678999999999999999999999999988877766554433
No 231
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.65 E-value=3.2e-05 Score=69.95 Aligned_cols=130 Identities=16% Similarity=0.039 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecc
Q 015136 63 SLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFV 141 (412)
Q Consensus 63 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~ 141 (412)
+.+.-+-.+-..+.-+.+.+..+|+..+.=..+..+++.++.++.+++++.+.-+++-++.+++.|.. .....+ ...+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhc
Confidence 33444455566677778888999988665566777788889999999999999899999999998886 544444 3455
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHHHhc
Q 015136 142 PAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN--WRWLLALSSIPSFAVLLLYSLA 198 (412)
Q Consensus 142 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--w~~~~~~~~~~~~~~~~~~~~~ 198 (412)
++ ..++-+..+.+.++++|+..-..+.+ .+ -|..+.+..++.++..+.++++
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~ 194 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFL 194 (402)
T ss_pred Cc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 53 35788888999999999887776666 55 4777777766555454444443
No 232
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.65 E-value=1.2e-07 Score=86.97 Aligned_cols=115 Identities=17% Similarity=0.078 Sum_probs=84.4
Q ss_pred hhhhh-hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhc--ch--hHHHHHHH
Q 015136 45 SFIGP-AVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAF--SP--NYISLVTL 119 (412)
Q Consensus 45 ~~~~~-~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~--~~--~~~~~~~~ 119 (412)
....| .+.+.+|.++.+.++..+...+...++.++.|+++||+|||+.+..+..+...+..+... .+ +.+...+.
T Consensus 245 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (366)
T TIGR00886 245 SSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVL 324 (366)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHH
Confidence 33344 445668999999999999999999999999999999999998887777666666554433 22 55555555
Q ss_pred HHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHH
Q 015136 120 RGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLG 160 (412)
Q Consensus 120 r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 160 (412)
..+.+++.|.. ....+.+.|..| +++|++.|+.+...++|
T Consensus 325 ~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 325 FVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 55555555554 555566777776 79999999988877665
No 233
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.61 E-value=4.1e-07 Score=84.83 Aligned_cols=171 Identities=16% Similarity=0.133 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHhhHHHhhhhhhhhhhh-hcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcch--------h-HHHH
Q 015136 26 VFAYAGLAVFAEAMEIMILSFIGPAVKS-EWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRK--------K-GFLG 95 (412)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr--------~-~~~~ 95 (412)
.+..++++.+........+....|.+.+ -+|.+-.+.|+.+++..+...+..+++|.++||.-+| | .-.+
T Consensus 259 ~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i 338 (466)
T KOG2532|consen 259 PVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTI 338 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhH
Confidence 5666777778777777777777786655 5899999999999999999999999999999988552 2 2234
Q ss_pred HHHHHHHHHHHhhcchhHHH-HHHHHHHHhhhcCcc--ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015136 96 IAMITSGIGLLSAFSPNYIS-LVTLRGLVGIGIGSG--PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVM 172 (412)
Q Consensus 96 ~~~~~~i~~~~~~~~~~~~~-~~~~r~l~G~~~g~~--~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 172 (412)
+....++..+..++.++-.. ..+.-+..+.+.... .....-..+. -+++-+..+|+.+....+...++|.+.+.+.
T Consensus 339 ~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~ 417 (466)
T KOG2532|consen 339 AFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIV 417 (466)
T ss_pred HHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEe
Confidence 44444555555555542111 111112222222222 1222222222 4578899999999999999999999999998
Q ss_pred hc---CChHHHHHHHHHHHHHHHHHHHh
Q 015136 173 IT---LNWRWLLALSSIPSFAVLLLYSL 197 (412)
Q Consensus 173 ~~---~~w~~~~~~~~~~~~~~~~~~~~ 197 (412)
.. ..||.+|++.+++.++..+.+.+
T Consensus 418 ~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 418 TDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred CCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 43 36999999999887777544433
No 234
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.61 E-value=2.5e-07 Score=86.68 Aligned_cols=121 Identities=14% Similarity=0.057 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhh-chhhH
Q 015136 282 RTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRA-GRKLS 360 (412)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-grr~~ 360 (412)
+.++..+...+...+.+|+...+.+.|..+. .|+++.+++.......+...++.+++|+++||+ |||+.
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~----------lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~ 78 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQ----------LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMA 78 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH
Confidence 4555566666677788899888888887433 478889999999999999899999999999998 99999
Q ss_pred HHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 361 LTIMLILVFICILPLAMLQS-NILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 361 l~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
+.++.++.+++.+++..... .....+.+.+..++.+...+...++++|.||+
T Consensus 79 iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~ 131 (493)
T PRK15462 79 VMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEP 131 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCC
Confidence 99999999888776654322 12233333334444555557778889999984
No 235
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.59 E-value=1.6e-06 Score=72.15 Aligned_cols=99 Identities=20% Similarity=0.182 Sum_probs=77.5
Q ss_pred HhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 015136 42 MILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRG 121 (412)
Q Consensus 42 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~ 121 (412)
..-++..-.+.++++....++|.+.-...-...+...+.|-++||-|||+.-+.-++...+++ +.-.++.+-.++++|.
T Consensus 54 WLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~ 132 (454)
T KOG4332|consen 54 WLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRV 132 (454)
T ss_pred hhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhh
Confidence 445667777889999999999988877777788888999999999999997666655555443 3456788999999999
Q ss_pred HHhhhcCcc-cccee-eeeecc
Q 015136 122 LVGIGIGSG-PVFSA-WFLEFV 141 (412)
Q Consensus 122 l~G~~~g~~-~~~~~-~i~~~~ 141 (412)
+.|++.+.. ..--+ +++|..
T Consensus 133 LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 133 LGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred hhhHHHHHHHHHHHHHHHHHhh
Confidence 999998886 55444 566765
No 236
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.59 E-value=2.6e-10 Score=107.80 Aligned_cols=170 Identities=19% Similarity=0.242 Sum_probs=112.7
Q ss_pred HHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhh---
Q 015136 32 LAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSA--- 108 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~--- 108 (412)
+..+....+........+.+.++.+.+.. -.......+...++.++...+.||+|||+.++.+..+.+++.+..+
T Consensus 260 l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~ 337 (451)
T PF00083_consen 260 LQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIF 337 (451)
T ss_pred ccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 33333333444555667888888888777 2223344455556777778999999999999999988888877664
Q ss_pred -cchhH-----HHHHHHHHHH--hhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHH
Q 015136 109 -FSPNY-----ISLVTLRGLV--GIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWL 180 (412)
Q Consensus 109 -~~~~~-----~~~~~~r~l~--G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~ 180 (412)
...+. ...++.-.+. +++.+..+....+..|.+|.+.|+++.++......++..+++.+...+.+..+-...
T Consensus 338 ~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~ 417 (451)
T PF00083_consen 338 FLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGV 417 (451)
T ss_pred ccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 11111 1122222222 223333366678889999999999999999999999999998888888776662334
Q ss_pred HHHHH-HHHHHHHHHHHhccCCch
Q 015136 181 LALSS-IPSFAVLLLYSLAPESPR 203 (412)
Q Consensus 181 ~~~~~-~~~~~~~~~~~~~~~~~~ 203 (412)
+.+.+ +..+..++.++++||+..
T Consensus 418 ~~i~~~~~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 418 FLIFAGVCLIAIIFVYFFLPETKG 441 (451)
T ss_pred chhhHHHHHHHHhheeEEEeeCCC
Confidence 44444 444444566788999853
No 237
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.58 E-value=4.5e-06 Score=79.45 Aligned_cols=144 Identities=19% Similarity=0.183 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHhhHHHhhhhhhhhhhh-hcCCCc---chhHHHHHHHHHHHHHHHHHHHHHHhhhcchh-HHHHHHHHHH
Q 015136 27 FAYAGLAVFAEAMEIMILSFIGPAVKS-EWGVSP---SAESLLSTVVFAGNLVGVYLWGLLSDNYGRKK-GFLGIAMITS 101 (412)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~---~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~-~~~~~~~~~~ 101 (412)
+.+..+..+..+........+.|+... -|+-+. ...++....+.++..+++.+.|.+..+++|-| .++++.+++.
T Consensus 312 ~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~t 391 (599)
T PF06609_consen 312 FAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMT 391 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHH
Confidence 444444555555555555555565533 455444 35788888999999999999999999988744 5567776666
Q ss_pred HHHHHhhc--chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 015136 102 GIGLLSAF--SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWI 170 (412)
Q Consensus 102 i~~~~~~~--~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 170 (412)
++.-+++. .+|....+..-++.|++.|.. ........-..|++.-|.+.++..+.-.+|+.+|..+..-
T Consensus 392 a~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 392 AFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 55444433 346666677888999999887 5666666667899999999999999999998888776644
No 238
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.56 E-value=1.6e-06 Score=82.37 Aligned_cols=131 Identities=11% Similarity=-0.018 Sum_probs=99.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcchhH-------HHHHHHHHHHHHHHh-----hc-----chhHHHHHHHHHHHh
Q 015136 62 ESLLSTVVFAGNLVGVYLWGLLSDNYGRKKG-------FLGIAMITSGIGLLS-----AF-----SPNYISLVTLRGLVG 124 (412)
Q Consensus 62 ~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~-------~~~~~~~~~i~~~~~-----~~-----~~~~~~~~~~r~l~G 124 (412)
.+++.++..+...+.+++.+++.||+|+|+. +.+|.++.+++.+.. .. ..+.+.+....++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 3566667778888999999999999999973 677777777665432 11 135677778899999
Q ss_pred hhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh----------cCChHHHHHHHHHHHHHHH
Q 015136 125 IGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI----------TLNWRWLLALSSIPSFAVL 192 (412)
Q Consensus 125 ~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----------~~~w~~~~~~~~~~~~~~~ 192 (412)
+|.+.. +...+++.+..|++.+|.++|++.....+|..++..++..... ...+.+.|...++..++..
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 469 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVA 469 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 999998 8889999999999999999999999999999999888865521 0124566666665555443
No 239
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.52 E-value=1e-06 Score=59.87 Aligned_cols=69 Identities=25% Similarity=0.317 Sum_probs=59.3
Q ss_pred HHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHH
Q 015136 32 LAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMIT 100 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 100 (412)
..++..........+..|...++.|+|+.++|.+.++..+...++.+++|.++||+++++..+....++
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 345555566677778888999999999999999999999999999999999999999999887776554
No 240
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.51 E-value=6.5e-08 Score=84.92 Aligned_cols=154 Identities=15% Similarity=0.132 Sum_probs=116.8
Q ss_pred HHhhhhhhhh-hhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc--chhHHHHHHHHHHHHHHHhhcchhHHHHH
Q 015136 41 IMILSFIGPA-VKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYG--RKKGFLGIAMITSGIGLLSAFSPNYISLV 117 (412)
Q Consensus 41 ~~~~~~~~~~-~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G--rr~~~~~~~~~~~i~~~~~~~~~~~~~~~ 117 (412)
....-+.++. +.|++..+..+.|+..--..+.+.++..+.|.++||++ |-.....+.+..+++.....+++++..+.
T Consensus 286 lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~ 365 (464)
T KOG3764|consen 286 LAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLW 365 (464)
T ss_pred HHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHh
Confidence 3344444444 56777766668898888889999999999999999999 43444456666666666677889999999
Q ss_pred HHHHHHhhhcCcc-cccee---eeeeccccc---chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015136 118 TLRGLVGIGIGSG-PVFSA---WFLEFVPAA---KRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFA 190 (412)
Q Consensus 118 ~~r~l~G~~~g~~-~~~~~---~i~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~ 190 (412)
+-++..|++.+.. ..... ++.|.-..+ .-|...++...++++|..+||.+++.+.+..|++|...+.++..++
T Consensus 366 vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~i 445 (464)
T KOG3764|consen 366 VPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLI 445 (464)
T ss_pred hhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHH
Confidence 8888888887765 43333 333332223 5688999999999999999999999999999999999988887776
Q ss_pred HHHH
Q 015136 191 VLLL 194 (412)
Q Consensus 191 ~~~~ 194 (412)
...+
T Consensus 446 yapv 449 (464)
T KOG3764|consen 446 YAPV 449 (464)
T ss_pred HHHH
Confidence 6433
No 241
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.49 E-value=1.5e-06 Score=76.97 Aligned_cols=159 Identities=13% Similarity=0.084 Sum_probs=123.3
Q ss_pred HHHHHHHhhHHHhhhhhhhhhhhh-cCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhc
Q 015136 31 GLAVFAEAMEIMILSFIGPAVKSE-WGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAF 109 (412)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 109 (412)
.++.++........+..++.+.++ .|.+..+.+...+.+..+..+|.++..++..|+...|.+.+..+...+..+..++
T Consensus 242 vl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l 321 (422)
T COG0738 242 VLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVAL 321 (422)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666666677777777766 7889999999999999999999999999999999999999988888888888888
Q ss_pred chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 015136 110 SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPS 188 (412)
Q Consensus 110 ~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~ 188 (412)
.++...+. +-++.|+..+.. |...+...+..| ++ ....|..-....+|+++.|.+.|++.|+.|-...+.....++
T Consensus 322 ~~g~v~~~-~l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc 398 (422)
T COG0738 322 IGGVVALY-ALFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLC 398 (422)
T ss_pred hcChHHHH-HHHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 88865544 456677777877 888888888887 33 334444455567889999999999999999888877444444
Q ss_pred HHHH
Q 015136 189 FAVL 192 (412)
Q Consensus 189 ~~~~ 192 (412)
.+.+
T Consensus 399 ~lyV 402 (422)
T COG0738 399 YLYV 402 (422)
T ss_pred HHHH
Confidence 4333
No 242
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.47 E-value=3.8e-06 Score=65.56 Aligned_cols=114 Identities=13% Similarity=0.150 Sum_probs=93.8
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceee
Q 015136 58 SPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAW 136 (412)
Q Consensus 58 s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~ 136 (412)
++..--.-.++.+....+++++.+.+.+++|.|+.+++|.+...+-.... +-++.+.++.+-.+.|++.+.. .....+
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~y 113 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTY 113 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHH
Confidence 33333444567777888999999999999999999999999988655543 4567888999999999999998 777789
Q ss_pred eeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015136 137 FLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVM 172 (412)
Q Consensus 137 i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 172 (412)
+.+...+++|++-.+++-.....+.++|.++...+.
T Consensus 114 lt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 114 LTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888888888877766553
No 243
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.44 E-value=1.2e-05 Score=74.96 Aligned_cols=146 Identities=14% Similarity=0.086 Sum_probs=92.8
Q ss_pred Hhhhhhhhhhh-hhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhh-----cchhHHH
Q 015136 42 MILSFIGPAVK-SEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSA-----FSPNYIS 115 (412)
Q Consensus 42 ~~~~~~~~~~~-~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~-----~~~~~~~ 115 (412)
..+....|.+. +.+|.++.+.++.......+..++..+.+.+.+|.++++.......+..++.++.. ..++++.
T Consensus 235 ~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~ 314 (413)
T PRK15403 235 MSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLW 314 (413)
T ss_pred HHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHH
Confidence 34444566554 45699999999998888888888888888877555554443333333333332221 1233444
Q ss_pred HHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 015136 116 LVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSF 189 (412)
Q Consensus 116 ~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~ 189 (412)
.++..++.++|.+.. +......- .-.+..+|++.++.+.....+..+++...+++.++ +-+..|...+++..
T Consensus 315 ~~~~~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~ 387 (413)
T PRK15403 315 SVLGTSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAG 387 (413)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHH
Confidence 566778888888776 55553221 11223479999999888888888999998888665 44556655544433
No 244
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.35 E-value=8.9e-06 Score=70.35 Aligned_cols=159 Identities=15% Similarity=0.128 Sum_probs=119.2
Q ss_pred hhhhhhhh-hhcCCCcchh-HHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 015136 45 SFIGPAVK-SEWGVSPSAE-SLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGL 122 (412)
Q Consensus 45 ~~~~~~~~-~~~~~s~~~~-~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 122 (412)
+...|.+. .+.+++..+. .-+.-...-.+.+.-.+.-.+.|..-.|++++.-.+.......+.-+.++.+.+-+.-+.
T Consensus 25 P~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~F 104 (433)
T KOG3810|consen 25 PYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFF 104 (433)
T ss_pred CccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhh
Confidence 34445444 3445555443 233344555667778888899999989999988888888888888899999999999999
Q ss_pred HhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHHHhccC
Q 015136 123 VGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN--WRWLLALSSIPSFAVLLLYSLAPE 200 (412)
Q Consensus 123 ~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--w~~~~~~~~~~~~~~~~~~~~~~~ 200 (412)
.|...+...+-++++-+..+++++-++.+...++.-.|...|..++..+.+... ++..=.+......+.....+++|.
T Consensus 105 yG~~tAaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~ 184 (433)
T KOG3810|consen 105 YGPATAAEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPR 184 (433)
T ss_pred cChHHHHHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCC
Confidence 998877767778999999999999999999999999999999999998876433 444444444444455566677777
Q ss_pred Cch
Q 015136 201 SPR 203 (412)
Q Consensus 201 ~~~ 203 (412)
.++
T Consensus 185 v~r 187 (433)
T KOG3810|consen 185 VKR 187 (433)
T ss_pred Cch
Confidence 654
No 245
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.28 E-value=4.8e-05 Score=66.80 Aligned_cols=142 Identities=17% Similarity=0.172 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHh-----hhcchhHH-----
Q 015136 24 YLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSD-----NYGRKKGF----- 93 (412)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d-----r~Grr~~~----- 93 (412)
...+..+.+.+..++.-.+... .+|.+.+.-|.|.++.+...-++.=. .--+++.++.| |+||||.-
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~GrrksWvvp~q 106 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRKSWVVPCQ 106 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhccccceeeehH
Confidence 3344455566778888777777 89999998899988887654443222 22578889999 99999843
Q ss_pred -HHHHHHHHHHHHHh------hcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHH
Q 015136 94 -LGIAMITSGIGLLS------AFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEA 165 (412)
Q Consensus 94 -~~~~~~~~i~~~~~------~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 165 (412)
++|.++..++...- +-.++...+....++.-+.++.- .++-.+......+++.|.+......+.+.|.+++.
T Consensus 107 ~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~ 186 (510)
T KOG3574|consen 107 YLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGN 186 (510)
T ss_pred HHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhc
Confidence 34444444443211 12244444544556666666766 66666777777888888888888888887777776
Q ss_pred HHH
Q 015136 166 ALA 168 (412)
Q Consensus 166 ~~~ 168 (412)
.+.
T Consensus 187 ~if 189 (510)
T KOG3574|consen 187 VVF 189 (510)
T ss_pred cee
Confidence 544
No 246
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.24 E-value=4.6e-05 Score=70.11 Aligned_cols=89 Identities=9% Similarity=-0.010 Sum_probs=80.1
Q ss_pred CCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHH
Q 015136 324 SMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIAC 403 (412)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (412)
+..+...|......-.+.++.-++.+++.+|+|+-+++.++..+..+=.+.+...++.|..+.+=++-+...+.++...-
T Consensus 402 ~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~ 481 (618)
T KOG3762|consen 402 GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAII 481 (618)
T ss_pred CCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHH
Confidence 45566667777777888899999999999999999999999999999999999999999998889999999999999999
Q ss_pred hhccCCCCC
Q 015136 404 IFTPEQLGW 412 (412)
Q Consensus 404 ~~~~e~~P~ 412 (412)
+|+++..||
T Consensus 482 sY~s~vaPp 490 (618)
T KOG3762|consen 482 SYASHVAPP 490 (618)
T ss_pred HHHHhhCCC
Confidence 999999986
No 247
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.19 E-value=7.1e-05 Score=70.12 Aligned_cols=139 Identities=12% Similarity=-0.019 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc-hhHHHHHHHHHHHHHHHhhcchh---------------------HHHHHHHHH
Q 015136 64 LLSTVVFAGNLVGVYLWGLLSDNYGR-KKGFLGIAMITSGIGLLSAFSPN---------------------YISLVTLRG 121 (412)
Q Consensus 64 ~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~~~~~~~~~~i~~~~~~~~~~---------------------~~~~~~~r~ 121 (412)
+....+.+...+.+++..++.+|+|+ |++..++.++.+++.....+.++ .+..++...
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 34445555556778888999999995 77778898888888776654432 266677788
Q ss_pred HHhhhcCcc-ccceeeeeecccc--cchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHH-HH
Q 015136 122 LVGIGIGSG-PVFSAWFLEFVPA--AKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN--WRWLLALSSIPSFAVLL-LY 195 (412)
Q Consensus 122 l~G~~~g~~-~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--w~~~~~~~~~~~~~~~~-~~ 195 (412)
+.|+..+.. ....+++++..++ ++.|..+|+.+.+..+.+++..+..+.+.+.+| -.+++.+.++..++..+ .+
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 899998887 7778999998885 456999999999999999999988887655444 55677777887777744 45
Q ss_pred HhccCCc
Q 015136 196 SLAPESP 202 (412)
Q Consensus 196 ~~~~~~~ 202 (412)
+.+|+.+
T Consensus 469 ~~~~~~~ 475 (477)
T TIGR01301 469 ILLPRPR 475 (477)
T ss_pred HhCCCCC
Confidence 5666654
No 248
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.17 E-value=0.0019 Score=60.78 Aligned_cols=153 Identities=16% Similarity=0.109 Sum_probs=97.5
Q ss_pred CccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHH-HHHHHHHHHHHHHhhhcchhHHHHHHH
Q 015136 20 GKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFA-GNLVGVYLWGLLSDNYGRKKGFLGIAM 98 (412)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~Grr~~~~~~~~ 98 (412)
.+..+..++.+.+..++..++.+.+-..-..+.-+- .+++.+..+-....+ ...+...+..++++|++|++++-+...
T Consensus 19 ~~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~-~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~ 97 (491)
T PF03219_consen 19 HRSELKKFLPLALMFFFILFNYTILRDLKDTLVVTA-QGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIII 97 (491)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEec-CChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 455666677777777776666554433322222111 256666666664444 555667889999999999998876665
Q ss_pred HHHHHHHHhhcc---------h----------------------hHHHHHHHHHHHhhhcCcc-c-cceeeeeecccccc
Q 015136 99 ITSGIGLLSAFS---------P----------------------NYISLVTLRGLVGIGIGSG-P-VFSAWFLEFVPAAK 145 (412)
Q Consensus 99 ~~~i~~~~~~~~---------~----------------------~~~~~~~~r~l~G~~~g~~-~-~~~~~i~~~~~~~~ 145 (412)
.+.....+.++. + +.|.+.+..+..-+-.... + .-..+.+|.++.++
T Consensus 98 ~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~e 177 (491)
T PF03219_consen 98 PFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEE 177 (491)
T ss_pred HHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 555554444331 1 1122222222222222222 3 34578889999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015136 146 RGMWMVIFSTFWTLGSIFEAALAWIVMI 173 (412)
Q Consensus 146 r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 173 (412)
-.|..+++..+.++|.+++..+...+.+
T Consensus 178 AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 178 AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998888877
No 249
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.15 E-value=8.1e-06 Score=76.56 Aligned_cols=160 Identities=16% Similarity=0.079 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHhhHHHhhhhhhhhhhhh-cCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh----hcchhHHHHHHHHH
Q 015136 26 VFAYAGLAVFAEAMEIMILSFIGPAVKSE-WGVSPSAESLLSTVVFAGNLVGVYLWGLLSDN----YGRKKGFLGIAMIT 100 (412)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~~~~~~~~~~ 100 (412)
.+...++..++.....+.+...+|.+.++ .|.|..+.+.+...+.++.+++.+++|+++|| ..+|..+.....+.
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 34455666777777778888889988888 56899999999999999999999999999999 67777777666666
Q ss_pred HHHH-HHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccch-hhHHHHHHHHHHHHHHHHHHHH-HHHHhcCC
Q 015136 101 SGIG-LLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKR-GMWMVIFSTFWTLGSIFEAALA-WIVMITLN 176 (412)
Q Consensus 101 ~i~~-~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r-~~~~~~~~~~~~~g~~~~~~~~-~~l~~~~~ 176 (412)
.+.. +......+......+-+....+.... +......++...++.| -...+....+.+.+.++.+.+- +.....++
T Consensus 354 ~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~ 433 (495)
T KOG2533|consen 354 AIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYG 433 (495)
T ss_pred HHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchh
Confidence 5555 44443433444333333334444444 5666777766655444 4444455555555554444433 33334467
Q ss_pred hHHHHHHHH
Q 015136 177 WRWLLALSS 185 (412)
Q Consensus 177 w~~~~~~~~ 185 (412)
|-..|....
T Consensus 434 ~~~~f~~~~ 442 (495)
T KOG2533|consen 434 WGAVFYMLV 442 (495)
T ss_pred hhhHHHHHH
Confidence 888884443
No 250
>PTZ00207 hypothetical protein; Provisional
Probab=98.14 E-value=2.6e-05 Score=74.72 Aligned_cols=115 Identities=11% Similarity=-0.016 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHH
Q 015136 285 LLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIM 364 (412)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~ 364 (412)
+.............|++..+.+.+. +++|++..+.+........ .....++.|++.||+|+|+++.++
T Consensus 30 lva~~~~~~~~g~~y~fsv~s~~L~-----------~~lgls~~~l~~i~svg~~-~g~~~lp~G~L~Dr~G~R~vllig 97 (591)
T PTZ00207 30 LVLGAFCSICTSFMYAFNLISGAMQ-----------ARYNLTQRDLSTITTVGIA-VGYFLLPYSFIYDYLGPRPIFVLS 97 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----------HHhCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcHHHHHHH
Confidence 3333333334445566666666554 3456888887777665333 334566889999999999999999
Q ss_pred HHHHHHHHHHHHhh------hhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCC
Q 015136 365 LILVFICILPLAML------QSNILITGLLVGARMFAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 365 ~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P 411 (412)
.++..++.++.++. .+.+.+.+..++.|++.+..++.....+.+.||
T Consensus 98 ~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp 150 (591)
T PTZ00207 98 MTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP 150 (591)
T ss_pred HHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh
Confidence 99999999888875 355556666667777776666666666777666
No 251
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.07 E-value=1e-05 Score=73.02 Aligned_cols=91 Identities=13% Similarity=-0.007 Sum_probs=85.6
Q ss_pred ccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHH
Q 015136 322 SQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTI 401 (412)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (412)
.+|.++...|++.....+...+.++++|++.||++|++++.+|..+-.++.++-.+..+.|.+.++=.+.|.+-.+..|+
T Consensus 62 ~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~i 141 (493)
T KOG1330|consen 62 YFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPI 141 (493)
T ss_pred hcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhccc
Confidence 35788999999999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred HHhhccCCCCC
Q 015136 402 ACIFTPEQLGW 412 (412)
Q Consensus 402 ~~~~~~e~~P~ 412 (412)
.+++++|.+|.
T Consensus 142 a~s~IaD~f~~ 152 (493)
T KOG1330|consen 142 APSLIADSFPD 152 (493)
T ss_pred chhHhhhcCcc
Confidence 99999999984
No 252
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.00 E-value=0.0025 Score=61.32 Aligned_cols=176 Identities=13% Similarity=0.059 Sum_probs=129.9
Q ss_pred cHHHHHHHHHHHHHHHhhHH-HhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh-hcchhHHHHHHHH
Q 015136 22 FQYLVFAYAGLAVFAEAMEI-MILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDN-YGRKKGFLGIAMI 99 (412)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~~~~~~~~ 99 (412)
..|+....+.......-+.. ......+.++.++++.+...+.-..+.+.-......+..++++|- +||-+++.++.++
T Consensus 34 g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i 113 (571)
T KOG1237|consen 34 GGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLI 113 (571)
T ss_pred chhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 34444433333333333332 233567788889999988888888888888888999999999996 5888999999888
Q ss_pred HHHHHHHhhcchh-------------------------HHHHHHHHHHHhhhcCcc-ccceeeeeeccc---c-cc--hh
Q 015136 100 TSGIGLLSAFSPN-------------------------YISLVTLRGLVGIGIGSG-PVFSAWFLEFVP---A-AK--RG 147 (412)
Q Consensus 100 ~~i~~~~~~~~~~-------------------------~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~---~-~~--r~ 147 (412)
..++..+...+.. ...++.+..+..+|.|.. +...+.-+|.++ + ++ +.
T Consensus 114 ~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~ 193 (571)
T KOG1237|consen 114 SLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIP 193 (571)
T ss_pred HHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcc
Confidence 8888644432111 234666777888899998 888999999988 3 22 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHh
Q 015136 148 MWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSL 197 (412)
Q Consensus 148 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~ 197 (412)
.-+.++....++|..++..+..+.-++.+|.+.|.+..+...+.+++.+.
T Consensus 194 ~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 194 SFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHc
Confidence 67788999999999999999999989999999999988776666554433
No 253
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.99 E-value=8.8e-06 Score=62.95 Aligned_cols=77 Identities=19% Similarity=0.129 Sum_probs=64.4
Q ss_pred HHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 336 LASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 336 ~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
...++.+++.++.|++.||+|||+.+..+..+..++.+.+...++.+...+..++.+++.+...+....+..|.+|+
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 34567788999999999999999999999888888888777767777777777888888888888888888888874
No 254
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.98 E-value=3.5e-05 Score=70.52 Aligned_cols=125 Identities=15% Similarity=0.013 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHh-hchhhH
Q 015136 282 RTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDR-AGRKLS 360 (412)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~grr~~ 360 (412)
|.+...+..-+.=-++||++-..+..|....- .+..|++++++.-....+....-+..+++||++|| +|+|+.
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~------~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQL------GDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhc------cccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 34445555555566778887666665553321 11245888888888877777777888999999999 599999
Q ss_pred HHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 361 LTIMLILVFICILPLAMLQ--SNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 361 l~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
+..+.++.+++-+++.... +...+.+.+.+...+.+..=+...++++|+||+
T Consensus 95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~ 148 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPK 148 (498)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCC
Confidence 9999999999999999874 566677777777788888889999999999985
No 255
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.94 E-value=0.014 Score=54.56 Aligned_cols=82 Identities=13% Similarity=0.104 Sum_probs=45.5
Q ss_pred chHHHHHHHHcchhhHHHHHHHHHHhhchh-hHHHHHHHHHHHH--HHHHH----------hhhhhHHHHHHHHHHHHHH
Q 015136 329 SLYLSVFLASLGELPGLVLAGIIVDRAGRK-LSLTIMLILVFIC--ILPLA----------MLQSNILITGLLVGARMFA 395 (412)
Q Consensus 329 ~~~~~~~~~~~~~~~g~~~~g~l~dr~grr-~~l~~~~~~~~~~--~~~l~----------~~~~~~~~~~~~~~~~~~~ 395 (412)
..-.....+.++..+|+.+..+..- -++| +.+.+..+.=.+. .+.+. +.++.+...+..++.|+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFMW-PDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeEe-eCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 3345666788899999986654311 1222 1222222211111 11111 1245666777788888888
Q ss_pred hhHhHHHHhhccCCCC
Q 015136 396 FGAFTIACIFTPEQLG 411 (412)
Q Consensus 396 ~~~~~~~~~~~~e~~P 411 (412)
|-.......+.++..+
T Consensus 387 Gy~~s~~m~~~p~~v~ 402 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVD 402 (437)
T ss_pred hHHHHHHHHhcCCCCC
Confidence 8777888877777654
No 256
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.88 E-value=0.00026 Score=68.36 Aligned_cols=152 Identities=22% Similarity=0.138 Sum_probs=102.8
Q ss_pred hhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHH---HHHHHHHHh
Q 015136 48 GPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYIS---LVTLRGLVG 124 (412)
Q Consensus 48 ~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~r~l~G 124 (412)
.+.....+|.+.. .................+.+.|++|||.....+..+..++.++.++..+... ..+...+..
T Consensus 341 l~~~~~~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (521)
T KOG0255|consen 341 LSLNVSGLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGK 417 (521)
T ss_pred hhhhhhhcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Confidence 3444444554433 3333333355555666689999999999999999999999998887654332 444445555
Q ss_pred hhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH-HHHHHhccCCc
Q 015136 125 IGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAV-LLLYSLAPESP 202 (412)
Q Consensus 125 ~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~ 202 (412)
++.+.. .....+.+|.+|...|..+.+.......+|.+++|.+...... ......+.+.+....+. .+...++||+.
T Consensus 418 ~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 418 FFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccC
Confidence 555554 5558889999999999999999999999999999988766544 22122222234444444 44558889985
Q ss_pred h
Q 015136 203 R 203 (412)
Q Consensus 203 ~ 203 (412)
.
T Consensus 497 ~ 497 (521)
T KOG0255|consen 497 G 497 (521)
T ss_pred C
Confidence 4
No 257
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.82 E-value=0.00021 Score=65.95 Aligned_cols=91 Identities=11% Similarity=-0.049 Sum_probs=82.1
Q ss_pred cccCCCCcc-hHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHh
Q 015136 321 VSQSMHDSS-LYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAF 399 (412)
Q Consensus 321 ~~~~~~~~~-~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 399 (412)
++.|+++.+ .+........+..+..+++|+++||+|.|+++..+.+...+..+++.+.++...+.++-++.|++.+..+
T Consensus 54 ~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~ 133 (511)
T TIGR00806 54 TVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI 133 (511)
T ss_pred HHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346799998 9999999999999999999999999999999999999999999999998888888889999999988888
Q ss_pred HHHHhhccCCCCC
Q 015136 400 TIACIFTPEQLGW 412 (412)
Q Consensus 400 ~~~~~~~~e~~P~ 412 (412)
....++.+.+|+
T Consensus 134 -A~~syI~~WfP~ 145 (511)
T TIGR00806 134 -AYSSYIFSLVPP 145 (511)
T ss_pred -HHHHHHHHHCCH
Confidence 888888777763
No 258
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.81 E-value=4.7e-05 Score=69.96 Aligned_cols=108 Identities=18% Similarity=0.210 Sum_probs=87.5
Q ss_pred hHHHHHHHHHHHHHHHhhcc---hh------HHHHHHHHHHHhhhcCcc-ccceeeeeeccccc---chhhHHHHHHHHH
Q 015136 91 KGFLGIAMITSGIGLLSAFS---PN------YISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAA---KRGMWMVIFSTFW 157 (412)
Q Consensus 91 ~~~~~~~~~~~i~~~~~~~~---~~------~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 157 (412)
|++++|.++..+|.++..++ .+ .+.++++..+.++|.|.. +...++.+|.++++ +|.+...++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788888888888774332 22 367888999999999999 99999999999765 4677888899999
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhc
Q 015136 158 TLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSLA 198 (412)
Q Consensus 158 ~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~ 198 (412)
++|..++..+.+++.++.||.+.|.+.++..++.++..+.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999998877776654443
No 259
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.80 E-value=0.0014 Score=60.35 Aligned_cols=141 Identities=15% Similarity=0.096 Sum_probs=80.4
Q ss_pred HHHHHHHHHhhHHHhhhhhhhhhhhh--cCCCcchhHHHHHHHHHHHHHHHHHHHHHHh-----hhcchhHHH------H
Q 015136 29 YAGLAVFAEAMEIMILSFIGPAVKSE--WGVSPSAESLLSTVVFAGNLVGVYLWGLLSD-----NYGRKKGFL------G 95 (412)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d-----r~Grr~~~~------~ 95 (412)
++.+.++.++.-.+......|.+.++ -+.|.++.+..+-+.. -+. .-+++.++.| |+||||..+ .
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~-PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASY-PFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeec-hhH-HHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 34455777776665554567888888 6888888876432211 111 1345555555 899999654 3
Q ss_pred HHHHHHHHHHHh----------hc-------ch--hHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHH
Q 015136 96 IAMITSGIGLLS----------AF-------SP--NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFST 155 (412)
Q Consensus 96 ~~~~~~i~~~~~----------~~-------~~--~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~ 155 (412)
|..+..++.-.. .. .+ +...+....++.-+-.+.- .++-.+.-....+++++.|..-...
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 333333333220 00 00 1112333333333444444 5555666667788899888888888
Q ss_pred HHHHHHHHHHHHHHHH
Q 015136 156 FWTLGSIFEAALAWIV 171 (412)
Q Consensus 156 ~~~~g~~~~~~~~~~l 171 (412)
+.+.|..++..+.-.+
T Consensus 162 G~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 162 GQTAGYFLSFTVFLAL 177 (544)
T ss_pred HhhhhHHHHHHHHHhh
Confidence 8888888776655444
No 260
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.78 E-value=0.00019 Score=66.92 Aligned_cols=125 Identities=20% Similarity=0.084 Sum_probs=111.8
Q ss_pred hhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHH-HHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhh
Q 015136 48 GPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWG-LLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIG 126 (412)
Q Consensus 48 ~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g-~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~ 126 (412)
.-++...++++.++.+...+.......+++.+.. .+...+|-|+++..|+....+...+.+++++.|+.+....+.++.
T Consensus 265 ~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~ 344 (463)
T KOG2816|consen 265 LLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA 344 (463)
T ss_pred EEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh
Confidence 3455677899999999999999998889888777 788889999999999999999999999999999999999998888
Q ss_pred cCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015136 127 IGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVM 172 (412)
Q Consensus 127 ~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 172 (412)
....+...+.++.+..++++|++.++......+...++|.+-+.+.
T Consensus 345 ~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 345 GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 6666888899999999999999999999999999999998877764
No 261
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.77 E-value=0.014 Score=53.70 Aligned_cols=151 Identities=15% Similarity=0.112 Sum_probs=100.5
Q ss_pred CCccHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCC---CcchhHHHHHHHHH-HHHHHHHHHHHHHhhhcchhHHH
Q 015136 19 FGKFQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGV---SPSAESLLSTVVFA-GNLVGVYLWGLLSDNYGRKKGFL 94 (412)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~Grr~~~~ 94 (412)
.++..+..++.+.+.+++..+..+.+ -.+.+.+.+ +++.+.++-+..-+ +..+..++.+++++++.+++++-
T Consensus 21 i~r~E~~kflpl~Ll~f~I~~ny~~l----R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~ 96 (509)
T COG3202 21 IRRYELKKFLPLALLFFCILFNYNLL----RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFY 96 (509)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHH----HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHH
Confidence 34556666666666666666655443 455555544 46667777777777 77888999999999999999888
Q ss_pred HHHHHHHHHHHHhhcc---------hh-----------------------HHHHHHHHHHHhhhcCcc-c-cceeeeeec
Q 015136 95 GIAMITSGIGLLSAFS---------PN-----------------------YISLVTLRGLVGIGIGSG-P-VFSAWFLEF 140 (412)
Q Consensus 95 ~~~~~~~i~~~~~~~~---------~~-----------------------~~~~~~~r~l~G~~~g~~-~-~~~~~i~~~ 140 (412)
.-...+....+++++. ++ .|...+.....=+=.... . .-.....|.
T Consensus 97 ~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNei 176 (509)
T COG3202 97 IILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEI 176 (509)
T ss_pred HHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777666666665542 11 122222222211111111 2 234566788
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015136 141 VPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI 173 (412)
Q Consensus 141 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 173 (412)
+..++-.|..++++.+.+++..++..+..++.+
T Consensus 177 tt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 177 TTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred hhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888999999999999999999999888888866
No 262
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.65 E-value=0.00019 Score=63.39 Aligned_cols=122 Identities=15% Similarity=0.105 Sum_probs=108.4
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc--chhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCc
Q 015136 52 KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYG--RKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGS 129 (412)
Q Consensus 52 ~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G--rr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~ 129 (412)
.+.+|.++.|+|-+.+...+++.+.+....+..||.. -+-.+..++.++.-..++.+.++....+..+..+-.+..+.
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~ 368 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTAS 368 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHH
Confidence 4779999999999999999999999999999999988 77778888888887788888888888899999998888877
Q ss_pred c-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015136 130 G-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI 173 (412)
Q Consensus 130 ~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 173 (412)
. +....++....|.++||.+.|+......++-++||+++|.+..
T Consensus 369 ~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 369 VVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred hhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 7 7777889999999999999999999999999999999988743
No 263
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.62 E-value=0.00099 Score=60.36 Aligned_cols=160 Identities=12% Similarity=0.052 Sum_probs=103.2
Q ss_pred HHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcc-hhHHHHHHHHHHHHHHHhh-c---chhHHH
Q 015136 41 IMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGR-KKGFLGIAMITSGIGLLSA-F---SPNYIS 115 (412)
Q Consensus 41 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~~~~~~~~~~i~~~~~~-~---~~~~~~ 115 (412)
.+.....+....+.-|.+....|++..+..++..+++.+.|.+.||... |.++++......++..... . ....+.
T Consensus 282 F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~vi 361 (480)
T KOG2563|consen 282 FNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVI 361 (480)
T ss_pred HHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEe
Confidence 3444444554455567777889999999999999999999999999875 4455555554444432211 1 123344
Q ss_pred HHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC---hHH-HHHHHHHHHHH
Q 015136 116 LVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN---WRW-LLALSSIPSFA 190 (412)
Q Consensus 116 ~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~---w~~-~~~~~~~~~~~ 190 (412)
++..-.+.|++.... |...-+-.|...|..-+...|+.+...++=..+-..+.+...+..+ |.. .-+......++
T Consensus 362 v~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l 441 (480)
T KOG2563|consen 362 VFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALL 441 (480)
T ss_pred hhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHH
Confidence 555666777777666 8888999998877777778888777666666666666666666555 333 33333444444
Q ss_pred HHHHHHhccC
Q 015136 191 VLLLYSLAPE 200 (412)
Q Consensus 191 ~~~~~~~~~~ 200 (412)
..++..+++|
T Consensus 442 ~~~lva~~r~ 451 (480)
T KOG2563|consen 442 GAILVAFFRP 451 (480)
T ss_pred HHHHHhhhhh
Confidence 4444444444
No 264
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.52 E-value=0.00059 Score=46.32 Aligned_cols=47 Identities=13% Similarity=0.201 Sum_probs=41.1
Q ss_pred ccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHH
Q 015136 322 SQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILV 368 (412)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~ 368 (412)
+.|+++.+.+....+..+..+++.++.|.++||.++++..+....++
T Consensus 29 ~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 29 QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 35799999999999999999999999999999999888877665543
No 265
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.50 E-value=0.00019 Score=70.52 Aligned_cols=92 Identities=12% Similarity=0.009 Sum_probs=77.9
Q ss_pred cccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhh---------------------
Q 015136 321 VSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQ--------------------- 379 (412)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~--------------------- 379 (412)
..++++..+.+++.+...++..++.++.+++.||.+||+.+.++.++.+++.+++++.+
T Consensus 61 k~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~ 140 (633)
T TIGR00805 61 RRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSA 140 (633)
T ss_pred hhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccccc
Confidence 44678999999999999999999999999999999999999999999999998887532
Q ss_pred ------------------------------hhHHHHHHHHHHHHHHhhHhHHHHhhccCCCCC
Q 015136 380 ------------------------------SNILITGLLVGARMFAFGAFTIACIFTPEQLGW 412 (412)
Q Consensus 380 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~P~ 412 (412)
....+++.-++.|++.+..++...+++.|.+|+
T Consensus 141 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~ 203 (633)
T TIGR00805 141 NSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKS 203 (633)
T ss_pred ccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCc
Confidence 112344567788888888899999999999885
No 266
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.29 E-value=0.00099 Score=56.65 Aligned_cols=81 Identities=26% Similarity=0.233 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHH
Q 015136 285 LLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIM 364 (412)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~ 364 (412)
+.............|.+..+.|.+.+ ..|+++.+.........++..+| ++.|.+.||+|.+.++.++
T Consensus 5 l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~-----------~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG 72 (250)
T PF06813_consen 5 LVASIWVQLCSGTTYTFSAYSPQLKS-----------RLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIG 72 (250)
T ss_pred HHHHHHHHHhcCcccchhhhhHHHHH-----------HhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHH
Confidence 33344444455567777777776663 45799999888888888888775 8899999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 015136 365 LILVFICILPLAM 377 (412)
Q Consensus 365 ~~~~~~~~~~l~~ 377 (412)
.+...++...+..
T Consensus 73 ~~~~~~GY~~~~l 85 (250)
T PF06813_consen 73 AVLGFVGYGLLWL 85 (250)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988875
No 267
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.26 E-value=0.11 Score=45.37 Aligned_cols=72 Identities=14% Similarity=0.132 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecc
Q 015136 69 VFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFV 141 (412)
Q Consensus 69 ~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~ 141 (412)
..+..+..+++.+.+..++|-|.++.++......... .-+-+.+..++-+-...|++.+.. ..--+|+++.-
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 4445566777777999999999999988877765433 334567888999999999999987 66667776654
No 268
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.98 E-value=0.15 Score=46.29 Aligned_cols=113 Identities=6% Similarity=-0.053 Sum_probs=55.0
Q ss_pred HHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHH---HHh
Q 015136 31 GLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIG---LLS 107 (412)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~---~~~ 107 (412)
++..+.....++.+....+++.+++-.+.. ..-....+.+...+...+...+--+...|.-..++..+..+.. +.+
T Consensus 24 ~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il~i~~l 102 (406)
T KOG1479|consen 24 LLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAILFIVTL 102 (406)
T ss_pred HHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444445567777778888888755444 3344444555554545555544444443332222222222221 111
Q ss_pred --hc-------chhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccc
Q 015136 108 --AF-------SPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAK 145 (412)
Q Consensus 108 --~~-------~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~ 145 (412)
+. ...+...++.-.+.+.+.|.. .......+ .+|++.
T Consensus 103 ~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~-~~P~~y 149 (406)
T KOG1479|consen 103 DLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAG-LFPSEY 149 (406)
T ss_pred HHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhh-cCCHHH
Confidence 11 123455556666777777765 44444443 345554
No 269
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.87 E-value=0.0029 Score=59.30 Aligned_cols=146 Identities=19% Similarity=0.197 Sum_probs=104.8
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhc-c---------hhHHHHHHHHHHHhhh
Q 015136 57 VSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAF-S---------PNYISLVTLRGLVGIG 126 (412)
Q Consensus 57 ~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~-~---------~~~~~~~~~r~l~G~~ 126 (412)
.|+...+.+..+..++..+|..+......+..-|+++.++.++.++..+.-.. . ++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 78888899888888899999999988888889999998888877766653221 1 1222222334455555
Q ss_pred cCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------hHHHHHHHHHHHHHHHHHHHh
Q 015136 127 IGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLN--------WRWLLALSSIPSFAVLLLYSL 197 (412)
Q Consensus 127 ~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--------w~~~~~~~~~~~~~~~~~~~~ 197 (412)
.+.. .....+++|..|+..-|...++..+..++|..++..++..+.+.++ -.+..++..+..++.+.+..+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 4554 5566778999999999999999999999999999999999887654 223334444555444555666
Q ss_pred ccCCc
Q 015136 198 APESP 202 (412)
Q Consensus 198 ~~~~~ 202 (412)
+|+..
T Consensus 412 Lp~~~ 416 (433)
T PF03092_consen 412 LPPQK 416 (433)
T ss_pred cCCCc
Confidence 77654
No 270
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.71 E-value=0.0044 Score=42.51 Aligned_cols=63 Identities=21% Similarity=0.153 Sum_probs=56.1
Q ss_pred cccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHH
Q 015136 321 VSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNIL 383 (412)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~ 383 (412)
++.+++..+.+++.+...++.++|.+...++.++.++++.+..+.+...+..+.+.+.++.+.
T Consensus 20 ~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~ 82 (85)
T PF06779_consen 20 ADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWL 82 (85)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 455799999999999999999999999999999988899999999999999999888766543
No 271
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.69 E-value=0.042 Score=48.88 Aligned_cols=78 Identities=15% Similarity=0.060 Sum_probs=59.6
Q ss_pred ccCCCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhH
Q 015136 322 SQSMHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFT 400 (412)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (412)
++|++..+++..+....+...+...+.|.+.||+|||+..+...++.+++++.-. .++.+.+++.=++.|......+.
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~-~~~~~~L~~GRvlgGiaTSLLfS 140 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH-SSNYPVLLLGRVLGGIATSLLFS 140 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHH
Confidence 3579999999999998888999999999999999999999998888888886443 34455555555555555444443
No 272
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.49 E-value=0.054 Score=50.26 Aligned_cols=144 Identities=19% Similarity=0.128 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 015136 27 FAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLL 106 (412)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 106 (412)
.+...++...-+++.-.++.....+...-|+++..+|..-+...+....+.+...++.+|+|..|.-+++.........+
T Consensus 260 vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~ 339 (432)
T PF06963_consen 260 VFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLAL 339 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHH
Confidence 44444555555555555666666666777999999999999999999999999999999999999888887765544433
Q ss_pred hhc---c---h----hHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 015136 107 SAF---S---P----NYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWI 170 (412)
Q Consensus 107 ~~~---~---~----~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 170 (412)
+.. . + +...++.+-.+.=+|.=.. ....-++-|..|+++||...|.-.+..++-.++...++-.
T Consensus 340 ~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii 414 (432)
T PF06963_consen 340 CVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTII 414 (432)
T ss_pred HHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 321 1 1 2233333444444443334 5556778899999999999999988888877776655443
No 273
>PRK03612 spermidine synthase; Provisional
Probab=96.47 E-value=0.13 Score=49.27 Aligned_cols=139 Identities=17% Similarity=0.066 Sum_probs=81.2
Q ss_pred hhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHH---HHHHHHh----hcchhH-HHHHHHH
Q 015136 49 PAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMIT---SGIGLLS----AFSPNY-ISLVTLR 120 (412)
Q Consensus 49 ~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~---~i~~~~~----~~~~~~-~~~~~~r 120 (412)
-.+.--+|-+....+.+.+++..|.++|+.+++++.++--++.. .+-..+. .++..+. .+.... ..++...
T Consensus 39 r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~ 117 (521)
T PRK03612 39 TLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLV 117 (521)
T ss_pred HHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445568888899999999999999999999988744333322 1111111 1111111 111111 1123334
Q ss_pred HHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHH-hcCChHHHHHHHHHHHH
Q 015136 121 GLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVM-ITLNWRWLLALSSIPSF 189 (412)
Q Consensus 121 ~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-~~~~w~~~~~~~~~~~~ 189 (412)
++.++..|+. |....+..+.. .++-|...|-......+|+++|.++.+++. ...|-....++.+.+.+
T Consensus 118 ~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~ 187 (521)
T PRK03612 118 LLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNL 187 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 5567777776 66554443321 223467788888889999999999887754 35675444444444333
No 274
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.40 E-value=0.12 Score=48.03 Aligned_cols=103 Identities=19% Similarity=0.167 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHHHHHh---hhcchhHHHHHHHHHHHHHHHhhcc------------------hhHHHHHHHHHHHhh
Q 015136 67 TVVFAGNLVGVYLWGLLSD---NYGRKKGFLGIAMITSGIGLLSAFS------------------PNYISLVTLRGLVGI 125 (412)
Q Consensus 67 s~~~~~~~i~~~~~g~l~d---r~Grr~~~~~~~~~~~i~~~~~~~~------------------~~~~~~~~~r~l~G~ 125 (412)
-...+|..+++.+.+.+.+ |+||++.+.++..+..++.++.... +++....+.-++.|+
T Consensus 286 ~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~ 365 (461)
T KOG3098|consen 286 IGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGF 365 (461)
T ss_pred HHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhh
Confidence 3444555566666777775 5789999999999888888766442 235566777899999
Q ss_pred hcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 015136 126 GIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWI 170 (412)
Q Consensus 126 ~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 170 (412)
+.+.. ...+.++...+ +++|..+.++...-..++..++......
T Consensus 366 ~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 366 GDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 99998 77888888888 6888889988888888777765544443
No 275
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.23 E-value=0.0057 Score=56.87 Aligned_cols=174 Identities=9% Similarity=0.033 Sum_probs=108.7
Q ss_pred CCCccHHHHHHHHHHHHHHHhhHHHh-hhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHH----HHHHHHH-hhhcchh
Q 015136 18 GFGKFQYLVFAYAGLAVFAEAMEIMI-LSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGV----YLWGLLS-DNYGRKK 91 (412)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~----~~~g~l~-dr~Grr~ 91 (412)
+..+..|...+.+.+..+...+.... -+...+.....++++.++.-+..+.......+-+ +..+... -++.+|+
T Consensus 255 ~~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~ 334 (488)
T KOG2325|consen 255 KKPKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRR 334 (488)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccce
Confidence 34566777777776766666655554 3344556677788888877655554433333222 2222222 2334566
Q ss_pred HHHHHHHHHHHHHHHhhcc-------------------------------hhHHHHHHH-HHHHhhhcCcc-ccceeeee
Q 015136 92 GFLGIAMITSGIGLLSAFS-------------------------------PNYISLVTL-RGLVGIGIGSG-PVFSAWFL 138 (412)
Q Consensus 92 ~~~~~~~~~~i~~~~~~~~-------------------------------~~~~~~~~~-r~l~G~~~g~~-~~~~~~i~ 138 (412)
.++.+.+.......+.... .+.+.+++. -++.|.+.-.. ....+.-+
T Consensus 335 ~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlyS 414 (488)
T KOG2325|consen 335 IILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYS 414 (488)
T ss_pred eeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHH
Confidence 6666644444333322110 011223333 34456655555 45567788
Q ss_pred ecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 015136 139 EFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAV 191 (412)
Q Consensus 139 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~ 191 (412)
|...|++++.+.+++......+..++|.+........|.|+.+.+.+...++.
T Consensus 415 kiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~ 467 (488)
T KOG2325|consen 415 KILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVV 467 (488)
T ss_pred HHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988889888887776555444
No 276
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.19 E-value=0.039 Score=46.61 Aligned_cols=55 Identities=25% Similarity=0.452 Sum_probs=35.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHH---Hh--cCChHHHHHHHHHHHHHHHHHHHhc
Q 015136 144 AKRGMWMVIFSTFWTLGSIFEAALAWIV---MI--TLNWRWLLALSSIPSFAVLLLYSLA 198 (412)
Q Consensus 144 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l---~~--~~~w~~~~~~~~~~~~~~~~~~~~~ 198 (412)
|+|+....+...+.++|.++....--.- .+ ...|++.+.+.+++.++-++.+.++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5667777777778888887754432211 11 2359999998887776665555444
No 277
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.01 E-value=0.052 Score=49.58 Aligned_cols=111 Identities=13% Similarity=0.050 Sum_probs=76.9
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHH-----HHHhhcchhHHHHHHHHHHHhhhcCcc-c
Q 015136 58 SPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGI-----GLLSAFSPNYISLVTLRGLVGIGIGSG-P 131 (412)
Q Consensus 58 s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~-----~~~~~~~~~~~~~~~~r~l~G~~~g~~-~ 131 (412)
..++..+....|.+|-.++.--...+ |+ |+..+...+-..-. ....-+.++.|..++.-+..|+..|.. .
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 34566677777777766664432221 33 44444333222211 122334678898888899999998887 6
Q ss_pred cceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015136 132 VFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVM 172 (412)
Q Consensus 132 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 172 (412)
.+...+.|..|+++|..++|....+-++|..++.+++-.+-
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 66677788889999999999999999999999888877653
No 278
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=94.92 E-value=0.06 Score=53.02 Aligned_cols=89 Identities=13% Similarity=0.036 Sum_probs=63.7
Q ss_pred cCCCCcchHHHHHHHHcchhhHHHHHHHHHHh-hchhhHHHHHHHHHHHHHHHHHhhhh--------hHHHHHHHHHHHH
Q 015136 323 QSMHDSSLYLSVFLASLGELPGLVLAGIIVDR-AGRKLSLTIMLILVFICILPLAMLQS--------NILITGLLVGARM 393 (412)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~grr~~l~~~~~~~~~~~~~l~~~~~--------~~~~~~~~~~~~~ 393 (412)
.|.+...+......+....-+..+++|++.|+ +||++.+.++.++..++..++.+... ....++.+.+...
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~ 97 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL 97 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh
Confidence 36777777777777777777888899999999 69999999999998888887775311 1223444555666
Q ss_pred HHhhHhHHHHhhccCCCC
Q 015136 394 FAFGAFTIACIFTPEQLG 411 (412)
Q Consensus 394 ~~~~~~~~~~~~~~e~~P 411 (412)
+.+++-|...+...|.++
T Consensus 98 G~GgiKp~vsaf~gdqf~ 115 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFE 115 (654)
T ss_pred hccccccCchhhhHhhcC
Confidence 666666777777666553
No 279
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.88 E-value=0.91 Score=35.66 Aligned_cols=83 Identities=14% Similarity=0.018 Sum_probs=60.3
Q ss_pred CCCcchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHhHHHHh
Q 015136 325 MHDSSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACI 404 (412)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (412)
.++..-.....+......+.+++.+.+.+++|.|+.++++.+...+-...... ++.+.++....+.|++.+..+.....
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~-~~~~~l~~~s~l~G~~~a~lW~aqg~ 112 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY-PNSYTLYPASALLGFGAALLWTAQGT 112 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHhhhhHHhhHhhhH
Confidence 33444445556666777888899999999999999999999988877666543 44566667777888877777766655
Q ss_pred hccC
Q 015136 405 FTPE 408 (412)
Q Consensus 405 ~~~e 408 (412)
++.+
T Consensus 113 ylt~ 116 (156)
T PF05978_consen 113 YLTS 116 (156)
T ss_pred HHHH
Confidence 5544
No 280
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=94.46 E-value=0.52 Score=41.08 Aligned_cols=137 Identities=12% Similarity=-0.013 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCccccceeeeeecc
Q 015136 62 ESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSGPVFSAWFLEFV 141 (412)
Q Consensus 62 ~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~i~~~~ 141 (412)
.|.+.-+-.+-..+..+.+....||+---.=..+..++.+.+..+.+++++.++-+.+-.+..++.|..-+...-.+..+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y 143 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRY 143 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccC
Confidence 34444455556666777778888886543335566677788888999999999999999999888887533333333444
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCChHHHHHHHHHHHHHHHHHHHhccCCc
Q 015136 142 PAAKRGMWMVIFSTFWTLGSIFEAALAWIVMI--TLNWRWLLALSSIPSFAVLLLYSLAPESP 202 (412)
Q Consensus 142 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (412)
++ ...+-+..+.+..+++|..--..+.+ ..+-|...++...+-++..+.++++-++|
T Consensus 144 ~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 144 PS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred CC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 43 33455666666666676665555555 34567777777665555555555544444
No 281
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.25 E-value=0.17 Score=44.42 Aligned_cols=83 Identities=28% Similarity=0.231 Sum_probs=59.8
Q ss_pred chHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHHhhHhHHHHhhc
Q 015136 329 SLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQS--NILITGLLVGARMFAFGAFTIACIFT 406 (412)
Q Consensus 329 ~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (412)
..+.......+...++.++.|.+.||.|||+.+..+......+.+...+..+ .....+.....+++.+...+...++.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 119 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALL 119 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 5677777888888888899999999999997877777654444444444333 44444444446777777888888888
Q ss_pred cCCCC
Q 015136 407 PEQLG 411 (412)
Q Consensus 407 ~e~~P 411 (412)
.|.+|
T Consensus 120 ~~~~~ 124 (338)
T COG0477 120 SEWFP 124 (338)
T ss_pred HHhcC
Confidence 88877
No 282
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.48 E-value=0.87 Score=42.72 Aligned_cols=108 Identities=14% Similarity=0.088 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcch-hHHHHHHHH---HHHHHHHhhc---------chhHHHHHHHHHHHhhhcCc
Q 015136 63 SLLSTVVFAGNLVGVYLWGLLSDNYGRK-KGFLGIAMI---TSGIGLLSAF---------SPNYISLVTLRGLVGIGIGS 129 (412)
Q Consensus 63 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr-~~~~~~~~~---~~i~~~~~~~---------~~~~~~~~~~r~l~G~~~g~ 129 (412)
-.....+++|-.+|..+..+.. .-++| +.+.+..++ +....++|.. .++-+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 4556778888888887554321 11222 122222222 2222233322 24566677779999999998
Q ss_pred c-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015136 130 G-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIV 171 (412)
Q Consensus 130 ~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 171 (412)
. ..+..+..+..++++|..+..+...+..+|..+|..++-.+
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 77778888888899999999999999999999888776544
No 283
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=92.12 E-value=0.043 Score=52.85 Aligned_cols=149 Identities=19% Similarity=0.173 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhHHHhhhhhhh-hhhhhcCCCcchhHHHHHHHHH-HHHHHHHHHHHHHhhhc--chhHHHHHHHHHH
Q 015136 26 VFAYAGLAVFAEAMEIMILSFIGP-AVKSEWGVSPSAESLLSTVVFA-GNLVGVYLWGLLSDNYG--RKKGFLGIAMITS 101 (412)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~G--rr~~~~~~~~~~~ 101 (412)
++....++.....+....+..+.| ++..+|+.++++.+++.+...+ +.++|.+++|++..|+. .|+.+....+...
T Consensus 306 ~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~ 385 (539)
T PF03137_consen 306 VFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSI 385 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHH
Confidence 455566666666666666666665 5677899999999998876666 77888999999999874 4444444444333
Q ss_pred HHHHHh---hc--c---------h----------------------------------------hHHHHHHHHHHHhhhc
Q 015136 102 GIGLLS---AF--S---------P----------------------------------------NYISLVTLRGLVGIGI 127 (412)
Q Consensus 102 i~~~~~---~~--~---------~----------------------------------------~~~~~~~~r~l~G~~~ 127 (412)
++.+.. .+ + . ++..+++..++.-+..
T Consensus 386 v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~ 465 (539)
T PF03137_consen 386 VSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFT 465 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHH
Confidence 333220 00 0 0 0112333333333333
Q ss_pred Ccc-ccceeeeeecccccchhhHHHHHHHHH-HHHHHHHHHHHHHHHhc
Q 015136 128 GSG-PVFSAWFLEFVPAAKRGMWMVIFSTFW-TLGSIFEAALAWIVMIT 174 (412)
Q Consensus 128 g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~-~~g~~~~~~~~~~l~~~ 174 (412)
+.. ......+-+..|+++|+.++|+..... -+|.+-||++.|.++|.
T Consensus 466 ~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 466 FMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -------------------------------------------------
T ss_pred HhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 333 334445557889999999999966544 45778888888888775
No 284
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=90.96 E-value=0.083 Score=47.11 Aligned_cols=79 Identities=19% Similarity=0.222 Sum_probs=3.0
Q ss_pred HHHHHHHcchhhHHHHHHHHHHhh-chhhHHHHHHHHHH--HHHHHHH-----------hhhhhHHHHHHHHHHHHHHhh
Q 015136 332 LSVFLASLGELPGLVLAGIIVDRA-GRKLSLTIMLILVF--ICILPLA-----------MLQSNILITGLLVGARMFAFG 397 (412)
Q Consensus 332 ~~~~~~~~~~~~g~~~~g~l~dr~-grr~~l~~~~~~~~--~~~~~l~-----------~~~~~~~~~~~~~~~~~~~~~ 397 (412)
.....+.++..+|+.+.++..-+. .+|.+... .+.=. +-++++. ..++.++..+..++.++..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~-s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWIL-SLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHH-HHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 346678899999999888753221 23433332 11111 1111111 123455666677777877777
Q ss_pred HhHHHHhhccCCCC
Q 015136 398 AFTIACIFTPEQLG 411 (412)
Q Consensus 398 ~~~~~~~~~~e~~P 411 (412)
.......+.++..+
T Consensus 265 l~tl~m~~~p~~v~ 278 (309)
T PF01733_consen 265 LSTLAMMYAPKSVS 278 (309)
T ss_dssp --HHHH--------
T ss_pred hhhceeeeCCCcCC
Confidence 77777777766544
No 285
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=89.89 E-value=2 Score=39.30 Aligned_cols=111 Identities=16% Similarity=0.119 Sum_probs=75.4
Q ss_pred cchhHHHHHH-HHHHHHHHHHHHHHHHhhhcchhHHHHHHH-HHHHHHHH-h------hcchhHHHHHHHHHHHhhhcCc
Q 015136 59 PSAESLLSTV-VFAGNLVGVYLWGLLSDNYGRKKGFLGIAM-ITSGIGLL-S------AFSPNYISLVTLRGLVGIGIGS 129 (412)
Q Consensus 59 ~~~~~~~~s~-~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~-~~~i~~~~-~------~~~~~~~~~~~~r~l~G~~~g~ 129 (412)
..-.-.+..+ +++...+|.+.+.++-++ +||...+.... +..+-.+. | .+-++-+.+++.-.+.|+..|=
T Consensus 281 ~~y~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGY 359 (406)
T KOG1479|consen 281 DWYALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGY 359 (406)
T ss_pred hhhHHHHHHHHhHHHHHhhhhhhhcccCC-CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccch
Confidence 3334555666 899999997777777666 34443333322 22222222 1 2345677788889999999988
Q ss_pred c-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 015136 130 G-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWI 170 (412)
Q Consensus 130 ~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 170 (412)
. .....+..+..|++++-.+-.+.......|...|..++..
T Consensus 360 ltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred HhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 7 7777888899999999888888888888888877666543
No 286
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=88.63 E-value=0.52 Score=43.45 Aligned_cols=85 Identities=15% Similarity=0.148 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCcchHHHHHHHHcchhhHHHHHHHHHHh----hch
Q 015136 282 RTTLLLWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSQSMHDSSLYLSVFLASLGELPGLVLAGIIVDR----AGR 357 (412)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~gr 357 (412)
+..+......+...+.+-.-..+.+.|.+ ..|.+....+......-+.+++.+++.|..+|| +||
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-----------~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GR 100 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-----------SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGR 100 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-----------HcCCCcccccccccccccccceeccccccccccccccccc
Confidence 44455555556666666665666666653 346888888888888888999999999999999 687
Q ss_pred hhHHHH-HHHHHHHHHHHHHh
Q 015136 358 KLSLTI-MLILVFICILPLAM 377 (412)
Q Consensus 358 r~~l~~-~~~~~~~~~~~l~~ 377 (412)
|+..+. +....+++.+++.+
T Consensus 101 RRPfI~~~s~~i~~~l~Lig~ 121 (498)
T KOG0637|consen 101 RRPFILAGSLLIAVSLFLIGY 121 (498)
T ss_pred ccchHHHhhHHHHHHHhhhhh
Confidence 766654 44555566665554
No 287
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=87.46 E-value=27 Score=33.25 Aligned_cols=68 Identities=18% Similarity=0.163 Sum_probs=48.5
Q ss_pred HhhhcCcc-ccceeeeeeccc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015136 123 VGIGIGSG-PVFSAWFLEFVP-AAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFA 190 (412)
Q Consensus 123 ~G~~~g~~-~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~ 190 (412)
.|+..... ..--..+.|.+| +++|...+|-+....++..++..++++.+.+.+||.....+.-++.++
T Consensus 276 y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 276 YGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 44444443 333356667776 456888899988888888877777778999999999888776655554
No 288
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=85.02 E-value=17 Score=33.17 Aligned_cols=162 Identities=9% Similarity=0.005 Sum_probs=89.5
Q ss_pred HHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcc-hhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHH--
Q 015136 28 AYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPS-AESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIG-- 104 (412)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~-- 104 (412)
+.+..+++....+.-+.......++.+++-+.- .++.-.-.-.....+..++.|...|+..|+|++.....+.=++.
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~v 109 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIV 109 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHH
Confidence 334566666666666777777777777664332 22322333344556777888999999999998877655443322
Q ss_pred ----HHhhcc------hhHHHHHHHHHH----HhhhcCccccceee--eeec----ccccchhhHH---HHHHHHHHHHH
Q 015136 105 ----LLSAFS------PNYISLVTLRGL----VGIGIGSGPVFSAW--FLEF----VPAAKRGMWM---VIFSTFWTLGS 161 (412)
Q Consensus 105 ----~~~~~~------~~~~~~~~~r~l----~G~~~g~~~~~~~~--i~~~----~~~~~r~~~~---~~~~~~~~~g~ 161 (412)
++..+. .+.+.+....++ ..++.-. ...... -.|| ...+.+.... +.....-..-.
T Consensus 110 agglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~La-s~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn 188 (503)
T KOG2601|consen 110 AGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLA-SLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTN 188 (503)
T ss_pred HHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHH-HhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhh
Confidence 222222 244443333322 2222111 111111 1122 2334444443 55555566667
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015136 162 IFEAALAWIVMITLNWRWLLALSSIPSFA 190 (412)
Q Consensus 162 ~~~~~~~~~l~~~~~w~~~~~~~~~~~~~ 190 (412)
.+.|.+.+.+....+-|..-.+.+..+++
T Consensus 189 ~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 189 LLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred chhhhhhcccceeechhhhhhhhHHHHHH
Confidence 89999999998887777755555444444
No 289
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=82.26 E-value=9.9 Score=35.20 Aligned_cols=96 Identities=10% Similarity=0.015 Sum_probs=66.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHH--HHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-cccee
Q 015136 59 PSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFL--GIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSA 135 (412)
Q Consensus 59 ~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~ 135 (412)
..--|.+-++..+..+++++..|++..++.+-.-+. ...++.+...++++..+|+|..+++-++.+...-.. +.+..
T Consensus 284 ~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~ 363 (412)
T PF01770_consen 284 SVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASF 363 (412)
T ss_pred cccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334488889999999999999999988877754433 444555566677788899999888887776665554 55444
Q ss_pred eeeecccccchhhHHHHHH
Q 015136 136 WFLEFVPAAKRGMWMVIFS 154 (412)
Q Consensus 136 ~i~~~~~~~~r~~~~~~~~ 154 (412)
-++.....++-|...|+..
T Consensus 364 qIA~~l~~e~yaLVFGiNt 382 (412)
T PF01770_consen 364 QIAKNLSEERYALVFGINT 382 (412)
T ss_pred HHHHhccccceeeeeeeHH
Confidence 4554444555555555443
No 290
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=77.09 E-value=15 Score=33.13 Aligned_cols=25 Identities=16% Similarity=0.319 Sum_probs=15.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Q 015136 278 SRLVRTTLLLWMLFFGNSFTYYGII 302 (412)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (412)
....+..+..|..|+...+.+....
T Consensus 156 ~~~ak~sl~fc~lWF~anl~~naAL 180 (416)
T KOG2765|consen 156 TQTAKLSLFFCPLWFLANLTSNAAL 180 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444555666777776666665543
No 291
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=76.51 E-value=74 Score=30.56 Aligned_cols=68 Identities=19% Similarity=0.277 Sum_probs=45.9
Q ss_pred HhhhcCcc-ccceeeeeecccc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015136 123 VGIGIGSG-PVFSAWFLEFVPA-AKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSFA 190 (412)
Q Consensus 123 ~G~~~g~~-~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~ 190 (412)
.|+..... ..--..+.+.+|+ +.+...+|-++...++-..+...+++.+.+..||+..-.+.-++.++
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~li 361 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILI 361 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHH
Confidence 34443433 3333555666764 45677778888888887777778889999999999988776444443
No 292
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=76.23 E-value=60 Score=29.40 Aligned_cols=93 Identities=17% Similarity=0.131 Sum_probs=59.5
Q ss_pred hhhhhhhhc-CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHH----H---Hhh--cchhHHHH
Q 015136 47 IGPAVKSEW-GVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIG----L---LSA--FSPNYISL 116 (412)
Q Consensus 47 ~~~~~~~~~-~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~----~---~~~--~~~~~~~~ 116 (412)
.+..+...+ |-+--|.+++.+.|...+.+|+...-++.|.--.-+....-.++..++. + .++ ..++-+.+
T Consensus 29 al~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vl 108 (508)
T COG4262 29 ALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVL 108 (508)
T ss_pred HHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHH
Confidence 344444443 4566788999999999999999999888775433332222222222221 1 111 13466778
Q ss_pred HHHHHHHhhhcCcc-ccceeeeee
Q 015136 117 VTLRGLVGIGIGSG-PVFSAWFLE 139 (412)
Q Consensus 117 ~~~r~l~G~~~g~~-~~~~~~i~~ 139 (412)
.+.-++.|.-.|.. |..+.++..
T Consensus 109 y~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 109 YALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHH
Confidence 88888999989987 887776654
No 293
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=75.90 E-value=49 Score=28.23 Aligned_cols=35 Identities=14% Similarity=0.051 Sum_probs=21.1
Q ss_pred HHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 015136 337 ASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFIC 371 (412)
Q Consensus 337 ~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~ 371 (412)
-.++..++-+.+-+++.|+.-|++.+++..+..+.
T Consensus 249 H~lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 249 HALCTGLAVIGGKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred HHHHHHHHHhhhHHHhhhheeEEEEEecchhHHHH
Confidence 34444555555557788888777766655544443
No 294
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=74.41 E-value=8.1 Score=34.70 Aligned_cols=93 Identities=11% Similarity=-0.019 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchh--HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeee
Q 015136 63 SLLSTVVFAGNLVGVYLWGLLSDNYGRKK--GFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLE 139 (412)
Q Consensus 63 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~ 139 (412)
|..-++..+..+++.+..|.+--++.|.. .+..+.+..+...++++.++++|..+++.++.+.-.... ++...-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 66667788888999999999999888774 444555566666677888899999888888877777776 666677777
Q ss_pred cccccchhhHHHHHHH
Q 015136 140 FVPAAKRGMWMVIFST 155 (412)
Q Consensus 140 ~~~~~~r~~~~~~~~~ 155 (412)
....+.-|...|+...
T Consensus 354 nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTF 369 (433)
T ss_pred hhhhhhheeeeehHHH
Confidence 7777777777777554
No 295
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=74.08 E-value=20 Score=31.10 Aligned_cols=126 Identities=14% Similarity=0.106 Sum_probs=77.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcchh--HHHHHHHHHHHHHHHh----hcch---hHHHHHHHHHHHhhhcCcc-c
Q 015136 62 ESLLSTVVFAGNLVGVYLWGLLSDNYGRKK--GFLGIAMITSGIGLLS----AFSP---NYISLVTLRGLVGIGIGSG-P 131 (412)
Q Consensus 62 ~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~--~~~~~~~~~~i~~~~~----~~~~---~~~~~~~~r~l~G~~~g~~-~ 131 (412)
-|.+.+.+++...+|+-+..++..|-..|. .+.+..+..+....+. ..++ +...-+++.++.-.+.|.. |
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 388999999999999999988888766553 3333333333332221 1222 2233344555556677777 8
Q ss_pred cceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHH--h--cCChHHHHHHHHHHHHHH
Q 015136 132 VFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVM--I--TLNWRWLLALSSIPSFAV 191 (412)
Q Consensus 132 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~--~--~~~w~~~~~~~~~~~~~~ 191 (412)
...-+=++..|.+.|+..+.++..-.++=.-++ -+-. + ..+-|..|-++.....+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClv----Lynlh~~~~p~~tr~mf~icS~~~~~a 423 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLV----LYNLHVDAFPTTTRNMFGICSAFLFVA 423 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhh----heecccccCccccchhhhhhHHHHHHH
Confidence 777788888999999999988766544322211 1110 1 234677887776655544
No 296
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=72.31 E-value=55 Score=27.13 Aligned_cols=29 Identities=14% Similarity=0.093 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 015136 150 MVIFSTFWTLGSIFEAALAWIVMITLNWR 178 (412)
Q Consensus 150 ~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 178 (412)
-.......-++..+|..++..+.+..+.+
T Consensus 164 ~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~ 192 (209)
T PF06912_consen 164 RALRYLLIILSFFIGAILGALLYRRLGFW 192 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 33444455556666666677776666643
No 297
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=70.83 E-value=1.1 Score=40.01 Aligned_cols=105 Identities=15% Similarity=0.152 Sum_probs=3.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh-cchhHHHHHHHHHH---HHHHHhh----------cchhHHHHHHHHHHHhhhcCcc
Q 015136 65 LSTVVFAGNLVGVYLWGLLSDNY-GRKKGFLGIAMITS---GIGLLSA----------FSPNYISLVTLRGLVGIGIGSG 130 (412)
Q Consensus 65 ~~s~~~~~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~---i~~~~~~----------~~~~~~~~~~~r~l~G~~~g~~ 130 (412)
...+++++-.+|..+.++.--+- .+|... +..++-. -..+++. ..+|-+..++..++.|+..|-.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 46678999999998877642111 244333 3222222 1122221 1234566677788999999988
Q ss_pred -ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 015136 131 -PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWI 170 (412)
Q Consensus 131 -~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 170 (412)
.....+..+..++++|..+..+...+..+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888899999999999888888888888888766544
No 298
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=69.04 E-value=23 Score=25.48 Aligned_cols=39 Identities=13% Similarity=-0.015 Sum_probs=24.3
Q ss_pred HHHcchhhHHHHHHHHHHhh-chhhHHHHHHHHHHHHHHH
Q 015136 336 LASLGELPGLVLAGIIVDRA-GRKLSLTIMLILVFICILP 374 (412)
Q Consensus 336 ~~~~~~~~g~~~~g~l~dr~-grr~~l~~~~~~~~~~~~~ 374 (412)
.=.+.+++.....||+.||+ |..+.-++.+++...+.-.
T Consensus 50 sefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~ 89 (116)
T COG5336 50 SEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGV 89 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 33455666667889999996 5666655555554444433
No 299
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=68.52 E-value=17 Score=36.41 Aligned_cols=79 Identities=19% Similarity=0.264 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHhhHHHhhhhhhh-hhhhhcCCCcchhHHHHHHHHH-HHHHHHHHHHHHHhhhc--chhHHHHHHHHHH
Q 015136 26 VFAYAGLAVFAEAMEIMILSFIGP-AVKSEWGVSPSAESLLSTVVFA-GNLVGVYLWGLLSDNYG--RKKGFLGIAMITS 101 (412)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~G--rr~~~~~~~~~~~ 101 (412)
++....++..+.......+..++| ++.++||.+.+.+..+.+...+ +.++|.+++|++..|+- .|....+.++...
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~ 472 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV 472 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence 455556666666666666666666 5667799999999998865555 56788889999999874 4555544444444
Q ss_pred HHH
Q 015136 102 GIG 104 (412)
Q Consensus 102 i~~ 104 (412)
+..
T Consensus 473 l~l 475 (735)
T KOG3626|consen 473 LSL 475 (735)
T ss_pred HHH
Confidence 433
No 300
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.10 E-value=33 Score=24.71 Aligned_cols=37 Identities=16% Similarity=0.138 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh-cchhHHHHHHHH
Q 015136 63 SLLSTVVFAGNLVGVYLWGLLSDNY-GRKKGFLGIAMI 99 (412)
Q Consensus 63 ~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~~~~~~~~ 99 (412)
.+-.+.-+++..+.....||+.||| |.++..++..++
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 4445666777778888899999997 455544444333
No 301
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=66.20 E-value=77 Score=30.77 Aligned_cols=24 Identities=13% Similarity=0.181 Sum_probs=12.8
Q ss_pred HHHHHHcchhhHHHHHHHHHHhhc
Q 015136 333 SVFLASLGELPGLVLAGIIVDRAG 356 (412)
Q Consensus 333 ~~~~~~~~~~~g~~~~g~l~dr~g 356 (412)
......+.+.++...++++...++
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~~~ 325 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKSFG 325 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcC
Confidence 344444555555555555555555
No 302
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=66.13 E-value=13 Score=32.94 Aligned_cols=72 Identities=15% Similarity=0.009 Sum_probs=56.3
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015136 100 TSGIGLLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIV 171 (412)
Q Consensus 100 ~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 171 (412)
+.+...+..+.++++..++..+.-|+-.|.. ....--+.+-.++++|-.+++.....-++|..++..++-.+
T Consensus 329 ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 329 FFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 3344455667889999888889999987776 55556677777889999999999999999998887776554
No 303
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=62.29 E-value=67 Score=27.71 Aligned_cols=97 Identities=18% Similarity=0.177 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-cchhHHH----HHHHHHHHHHHHhh-cc----hhHHHHHHHHHHHhhhcCcc-cc
Q 015136 64 LLSTVVFAGNLVGVYLWGLLSDNY-GRKKGFL----GIAMITSGIGLLSA-FS----PNYISLVTLRGLVGIGIGSG-PV 132 (412)
Q Consensus 64 ~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~~~----~~~~~~~i~~~~~~-~~----~~~~~~~~~r~l~G~~~g~~-~~ 132 (412)
...-++..|..+|.+..|+....- -||+.+. .+.+++.++.+... .. .+...+++.-++.|++.=.. ++
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~V 224 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGV 224 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 344456666667777778877744 4554332 33444455444421 11 13566777788888765333 33
Q ss_pred ceeeeeec--ccccchhhHHHHHHHHHHHHHHH
Q 015136 133 FSAWFLEF--VPAAKRGMWMVIFSTFWTLGSIF 163 (412)
Q Consensus 133 ~~~~i~~~--~~~~~r~~~~~~~~~~~~~g~~~ 163 (412)
....=.|. +.|++-|...| ..+++|.++
T Consensus 225 iL~lPhEyK~~~pk~ig~~Fg---~iWGfGY~~ 254 (267)
T PF07672_consen 225 ILNLPHEYKGYNPKKIGIQFG---LIWGFGYIF 254 (267)
T ss_pred HhcChhhhcCCCcceehhHHH---HHHHHHHHH
Confidence 33222232 34444444444 445555544
No 304
>COG1288 Predicted membrane protein [Function unknown]
Probab=61.55 E-value=1.3e+02 Score=28.08 Aligned_cols=23 Identities=4% Similarity=0.003 Sum_probs=14.9
Q ss_pred HHhcCChHHHHHHHHHHHHHHHH
Q 015136 171 VMITLNWRWLLALSSIPSFAVLL 193 (412)
Q Consensus 171 l~~~~~w~~~~~~~~~~~~~~~~ 193 (412)
+.+..+||...++......+..+
T Consensus 212 ~~sG~~~Riv~~v~~~~~~i~y~ 234 (481)
T COG1288 212 FLSGMGLRIVVWVVFTLISIIYV 234 (481)
T ss_pred ccccchHHHHHHHHHHHHHHHHH
Confidence 34456899998887765544433
No 305
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=59.70 E-value=28 Score=27.13 Aligned_cols=51 Identities=12% Similarity=0.134 Sum_probs=33.7
Q ss_pred hhHHHHHHHHHHHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHH
Q 015136 111 PNYISLVTLRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIF 163 (412)
Q Consensus 111 ~~~~~~~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 163 (412)
+++..++..-.+.|+|.- .+.+..++..+.+++.|..+|+-.+-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gll--GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLL--GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHHH--hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 344555555555554432 345556677788898999999988888876554
No 306
>PRK10263 DNA translocase FtsK; Provisional
Probab=59.40 E-value=51 Score=35.40 Aligned_cols=22 Identities=23% Similarity=0.280 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc
Q 015136 68 VVFAGNLVGVYLWGLLSDNYGR 89 (412)
Q Consensus 68 ~~~~~~~i~~~~~g~l~dr~Gr 89 (412)
+.+.+..+|..+...+..-||.
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhH
Confidence 4455566666666666666664
No 307
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=57.39 E-value=50 Score=26.74 Aligned_cols=26 Identities=23% Similarity=0.556 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhH
Q 015136 67 TVVFAGNLVGVYLWGLLSDNYGRKKG 92 (412)
Q Consensus 67 s~~~~~~~i~~~~~g~l~dr~Grr~~ 92 (412)
.-|.+++.+++.+.|++.||.-+|+.
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~~~~ 114 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRKRNG 114 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcccc
Confidence 56788999999999999999886333
No 308
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=57.25 E-value=71 Score=31.37 Aligned_cols=55 Identities=13% Similarity=0.150 Sum_probs=40.8
Q ss_pred cCCCCcchHHHHHHHHcchhhHHHHHHHHHHhh-chhhHHHHHHHHHHHHHHHHHh
Q 015136 323 QSMHDSSLYLSVFLASLGELPGLVLAGIIVDRA-GRKLSLTIMLILVFICILPLAM 377 (412)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-grr~~l~~~~~~~~~~~~~l~~ 377 (412)
.+.+...+.-.............+.+++++|-+ ||-+++.++.++..++..++..
T Consensus 68 ~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~ 123 (571)
T KOG1237|consen 68 LHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTL 123 (571)
T ss_pred hccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555566666666677778999999995 8888888888888888766664
No 309
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=54.93 E-value=43 Score=24.83 Aligned_cols=13 Identities=15% Similarity=0.151 Sum_probs=8.9
Q ss_pred HHHHHhccCCchh
Q 015136 192 LLLYSLAPESPRY 204 (412)
Q Consensus 192 ~~~~~~~~~~~~~ 204 (412)
+++++.+|+.|..
T Consensus 57 i~l~~~lp~~P~~ 69 (118)
T PRK10697 57 IILSFALDPMPDN 69 (118)
T ss_pred HHHHHhccCCccc
Confidence 5567778877754
No 310
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=53.79 E-value=42 Score=24.16 Aligned_cols=51 Identities=20% Similarity=0.034 Sum_probs=42.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc
Q 015136 60 SAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS 110 (412)
Q Consensus 60 ~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 110 (412)
+..|=+.+.|.-.+.+.++++++..|+.-+-+-=.+|..++.++..+..+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 456778889999999999999999999988888888888888877665543
No 311
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=51.17 E-value=93 Score=28.65 Aligned_cols=14 Identities=21% Similarity=0.434 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHhhh
Q 015136 74 LVGVYLWGLLSDNY 87 (412)
Q Consensus 74 ~i~~~~~g~l~dr~ 87 (412)
.+.....|++..|+
T Consensus 9 i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 9 IFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHh
Confidence 34444555555554
No 312
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=51.14 E-value=1.8e+02 Score=26.38 Aligned_cols=35 Identities=11% Similarity=0.231 Sum_probs=25.5
Q ss_pred HcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 015136 338 SLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICI 372 (412)
Q Consensus 338 ~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~ 372 (412)
.+.-+..+++.+.+.+++|-|..+.++........
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyi 102 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYI 102 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34455666777799999999999888776665544
No 313
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=48.68 E-value=87 Score=24.36 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 015136 67 TVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLL 106 (412)
Q Consensus 67 s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 106 (412)
.-|.+|+.+.+.+.|++.+|..+++..........++.+.
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~i 99 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLI 99 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 4578889999999999999988874333333333333333
No 314
>PRK02237 hypothetical protein; Provisional
Probab=47.12 E-value=77 Score=22.95 Aligned_cols=51 Identities=14% Similarity=-0.046 Sum_probs=41.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc
Q 015136 60 SAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS 110 (412)
Q Consensus 60 ~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 110 (412)
+..|=+.+.|.-.+.+.++++++..|+.-+-+-=.+|..++.++..+..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 346788899999999999999999999988777788888887777655443
No 315
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=46.91 E-value=1.9e+02 Score=24.95 Aligned_cols=20 Identities=10% Similarity=-0.006 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHhhhcccccc
Q 015136 293 GNSFTYYGIILMTSKLSSTQ 312 (412)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~ 312 (412)
.....+|+..+.-..|.+|.
T Consensus 189 v~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 189 VFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred HHHHHHHhcccchHHHHHhC
Confidence 34456677777677776555
No 316
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=46.59 E-value=73 Score=20.05 Aligned_cols=45 Identities=16% Similarity=0.209 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhccCC
Q 015136 157 WTLGSIFEAALAWIVMITLNWRWLLALSSIPSFAVLLLYSLAPES 201 (412)
Q Consensus 157 ~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 201 (412)
.-+|..++...+..-...+++.....+..+.+++...+...+|++
T Consensus 11 ~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 11 FILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 345666666655555556777777666666666665555555554
No 317
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=42.99 E-value=1.1e+02 Score=22.02 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=16.2
Q ss_pred hhhHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 015136 341 ELPGLVLAGIIVDRAGRKLSLTIMLILVFICI 372 (412)
Q Consensus 341 ~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~ 372 (412)
.++|..++-|+-++++..+.+.+.+++.+++.
T Consensus 56 il~G~~lG~WLD~~~~t~~~~tl~~lllGv~~ 87 (100)
T TIGR02230 56 TLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVI 87 (100)
T ss_pred HHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 34444455555555776555554444444433
No 318
>COG4769 Predicted membrane protein [Function unknown]
Probab=42.63 E-value=41 Score=26.40 Aligned_cols=51 Identities=20% Similarity=0.036 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhh
Q 015136 69 VFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGI 125 (412)
Q Consensus 69 ~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~ 125 (412)
+....++.+...=++..++|+|..-++|.- +.-++.+|..++++++++.+-
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhc
Confidence 444555666667778889998876444432 234567899999999988754
No 319
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=41.66 E-value=51 Score=23.75 Aligned_cols=49 Identities=10% Similarity=-0.090 Sum_probs=38.4
Q ss_pred cchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHH
Q 015136 328 SSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLA 376 (412)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l~ 376 (412)
...+-....++-..++.+++.++..|+..+-+-=.++..++.++..++.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheE
Confidence 5667788889999999999999999999877666666666666555443
No 320
>PRK03612 spermidine synthase; Provisional
Probab=40.60 E-value=3.6e+02 Score=26.30 Aligned_cols=31 Identities=10% Similarity=0.021 Sum_probs=20.6
Q ss_pred CCCCcchHHHHHHHHcchhhHHHHHHHHHHh
Q 015136 324 SMHDSSLYLSVFLASLGELPGLVLAGIIVDR 354 (412)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr 354 (412)
|.+....+.+.+.+-.+..+|+.+++++.++
T Consensus 46 G~s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 46 GDSVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 4555566666777777777777777766544
No 321
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=39.22 E-value=4.5e+02 Score=27.12 Aligned_cols=37 Identities=22% Similarity=0.296 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 015136 153 FSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIPSF 189 (412)
Q Consensus 153 ~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~~~ 189 (412)
...+..++.++..+++.++....+|..++++.++++.
T Consensus 106 l~~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILAP 142 (810)
T TIGR00844 106 LVPVMTSGWLVIALFVWILVPGLNFPASLLMGACITA 142 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcC
Confidence 3444455555555555555445677777766665543
No 322
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=37.50 E-value=42 Score=32.11 Aligned_cols=30 Identities=20% Similarity=-0.054 Sum_probs=16.8
Q ss_pred CCCcchHHHHHHHHcchhhHHHHHHHHHHh
Q 015136 325 MHDSSLYLSVFLASLGELPGLVLAGIIVDR 354 (412)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr 354 (412)
.++..-|.+...+.+.-++..+++|+.+-|
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~r 385 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSAR 385 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhh
Confidence 344444555555555555666666666666
No 323
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=36.89 E-value=1e+02 Score=20.60 Aligned_cols=60 Identities=17% Similarity=0.075 Sum_probs=34.1
Q ss_pred HHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCccccceeeeeecccccc
Q 015136 83 LSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIGSGPVFSAWFLEFVPAAK 145 (412)
Q Consensus 83 l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~i~~~~~~~~ 145 (412)
--|+-.|++-+.+.+.+-..+.++..+....+. .+...-.+....|-....+++--++++
T Consensus 10 ~~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~~~---la~~~~~~av~LPwvAVviAN~~~~~~ 69 (73)
T PF11298_consen 10 SQDQRRRRRRYLIMMGIRIPCFVLAAVVYRLGW---LAWAIIVGAVPLPWVAVVIANARPPRR 69 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH---HHHHHHHHhcccchhheeeccCCCCCC
Confidence 346777888888888888888877776654411 122222222223545555555444443
No 324
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=35.59 E-value=1.2e+02 Score=29.02 Aligned_cols=48 Identities=15% Similarity=0.223 Sum_probs=31.8
Q ss_pred ccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 015136 131 PVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWR 178 (412)
Q Consensus 131 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 178 (412)
....+.-+...+|..=|+.|.+.++..++|+---..+.-.+.|.+.++
T Consensus 424 Vai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~ 471 (544)
T PF13000_consen 424 VAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVA 471 (544)
T ss_pred HHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcccc
Confidence 445566777777888888888888887777655554555555544443
No 325
>PRK02237 hypothetical protein; Provisional
Probab=33.70 E-value=97 Score=22.45 Aligned_cols=48 Identities=10% Similarity=-0.099 Sum_probs=37.3
Q ss_pred cchHHHHHHHHcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHH
Q 015136 328 SSLYLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPL 375 (412)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l 375 (412)
...+-....++-..++.+++.++..|+...-+-=.++..++.++..++
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 346778888899999999999999999987666666666666655544
No 326
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=33.10 E-value=3.9e+02 Score=24.57 Aligned_cols=30 Identities=3% Similarity=-0.139 Sum_probs=23.1
Q ss_pred HhhHHHhhhhhhhhhhhhcCCCcchhHHHH
Q 015136 37 EAMEIMILSFIGPAVKSEWGVSPSAESLLS 66 (412)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 66 (412)
.....-.+........+++|.++.-.|.+.
T Consensus 234 Vv~lAe~lv~sIe~~v~~~Glp~afiGvII 263 (366)
T PRK10599 234 VIAVTKMNASPLETLLTSMNAPVAFTGFLV 263 (366)
T ss_pred HHHHHHHhHhhHHHHHHhcCCCHHHHHHHH
Confidence 333445666778888999999999999876
No 327
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=31.47 E-value=4.1e+02 Score=25.45 Aligned_cols=33 Identities=21% Similarity=0.437 Sum_probs=21.9
Q ss_pred cchhHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 015136 88 GRKKGFLGIAMITSGIGLLSAFSPNYISLVTLR 120 (412)
Q Consensus 88 Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r 120 (412)
|.|+.+.-..+.+.++.+..++.+++....+.-
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~~gYyl~fl~~ 371 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLYPGYILFFVQS 371 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 444555556677778888888887776655443
No 328
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=31.39 E-value=4.8e+02 Score=25.12 Aligned_cols=148 Identities=12% Similarity=0.134 Sum_probs=81.7
Q ss_pred hhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHH---------HHHH-HHHHHHHHHhhc---
Q 015136 43 ILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGF---------LGIA-MITSGIGLLSAF--- 109 (412)
Q Consensus 43 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~---------~~~~-~~~~i~~~~~~~--- 109 (412)
.++...-.+++|. .+..|..=..+.+.++..++.+++|.+.-.+++++-. +... ...+...+++..
T Consensus 164 V~S~lFw~faNei-tt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~ 242 (509)
T COG3202 164 VLSLLFWQFANEI-TTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYR 242 (509)
T ss_pred HHHHHHHHHHHHh-hhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333444443 2556777788888888888888888888877763321 1111 111111111111
Q ss_pred -----------------------------chhHHHHHHHHHHHhh---------hcCcc-ccceeeeeecccc-cchhhH
Q 015136 110 -----------------------------SPNYISLVTLRGLVGI---------GIGSG-PVFSAWFLEFVPA-AKRGMW 149 (412)
Q Consensus 110 -----------------------------~~~~~~~~~~r~l~G~---------~~g~~-~~~~~~i~~~~~~-~~r~~~ 149 (412)
..++..+.=.|.+.++ +.... ..--+-+.+.+|. +.+..-
T Consensus 243 ~~~r~il~~~~f~~~~~~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f 322 (509)
T COG3202 243 YINRNVLTDPLFYLRAKKKKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAF 322 (509)
T ss_pred HHHhhcccCcchhHHHhcccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHH
Confidence 0112222223333333 32222 2222445566663 346777
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 015136 150 MVIFSTFWTLG-SIFEAALAWIVMITLNWRWLLALSSIPSFAV 191 (412)
Q Consensus 150 ~~~~~~~~~~g-~~~~~~~~~~l~~~~~w~~~~~~~~~~~~~~ 191 (412)
+|-++...++- ..+...+++-+....||-+.-.+.-++.++.
T Consensus 323 ~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~lit 365 (509)
T COG3202 323 MGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLIT 365 (509)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHH
Confidence 77777777766 5566677888889999988877766666555
No 329
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=30.52 E-value=1.1e+02 Score=28.42 Aligned_cols=133 Identities=12% Similarity=0.027 Sum_probs=76.5
Q ss_pred hhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh----------cchhHHHHHHHHHHHHHHHh-h-cc
Q 015136 43 ILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNY----------GRKKGFLGIAMITSGIGLLS-A-FS 110 (412)
Q Consensus 43 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~----------Grr~~~~~~~~~~~i~~~~~-~-~~ 110 (412)
.-..+.+--.-|.|++..+.+++. +.....++..+...-|+ -|+..+.+.........+.. . +.
T Consensus 283 a~da~t~LkLle~Gv~ke~Lal~~----v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~ 358 (510)
T KOG3574|consen 283 AADALTSLKLLEHGVPKEELALIA----VPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLG 358 (510)
T ss_pred hhhhccchHHHHcCCChhHheeee----eehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccc
Confidence 334455666778899999888766 23333344444444443 22222333333322222211 1 11
Q ss_pred -------hhHHHHHH-HHHHH-hhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHH
Q 015136 111 -------PNYISLVT-LRGLV-GIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRW 179 (412)
Q Consensus 111 -------~~~~~~~~-~r~l~-G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~ 179 (412)
..+..+.+ ...+. ++...+.....+..++..+|..-|+-|.+.+.-.++|..--..+...+.+.++|+-
T Consensus 359 ~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~ 436 (510)
T KOG3574|consen 359 HSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQ 436 (510)
T ss_pred cCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceee
Confidence 12233333 22232 22223335566788899999999999999999999998877777888888777654
No 330
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=29.46 E-value=1.3e+02 Score=19.21 Aligned_cols=26 Identities=23% Similarity=0.514 Sum_probs=14.8
Q ss_pred hHHHHHHHHHHH---HHH-HHHHHhccCCc
Q 015136 177 WRWLLALSSIPS---FAV-LLLYSLAPESP 202 (412)
Q Consensus 177 w~~~~~~~~~~~---~~~-~~~~~~~~~~~ 202 (412)
+|..|.+..+.. ++. +++++.+|+.|
T Consensus 31 vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 31 VRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 566666655432 222 45567777765
No 331
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=29.34 E-value=78 Score=27.39 Aligned_cols=62 Identities=15% Similarity=0.213 Sum_probs=44.0
Q ss_pred HHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHH---------HhhhcchhHH
Q 015136 32 LAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLL---------SDNYGRKKGF 93 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l---------~dr~Grr~~~ 93 (412)
.+.+.+-...+..-..+-.+.++.|.++.+...++-+..+.-++..++.|.. .||+|||+..
T Consensus 24 vGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 24 VGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred hhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 4444444444444455566678889999888888888888888888888644 4699999743
No 332
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=28.77 E-value=1.9e+02 Score=21.64 Aligned_cols=13 Identities=23% Similarity=0.381 Sum_probs=8.7
Q ss_pred HHHHHhccCCchh
Q 015136 192 LLLYSLAPESPRY 204 (412)
Q Consensus 192 ~~~~~~~~~~~~~ 204 (412)
+++++++|+.|..
T Consensus 52 ~i~w~~lp~~p~~ 64 (121)
T TIGR02978 52 IALWLLLDKKPIN 64 (121)
T ss_pred HHHHHHHhcCccc
Confidence 4567778877653
No 333
>PRK10263 DNA translocase FtsK; Provisional
Probab=28.04 E-value=8.6e+02 Score=26.93 Aligned_cols=38 Identities=11% Similarity=0.035 Sum_probs=25.7
Q ss_pred HcchhhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHH
Q 015136 338 SLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPL 375 (412)
Q Consensus 338 ~~~~~~g~~~~g~l~dr~grr~~l~~~~~~~~~~~~~l 375 (412)
..++++|..++..+...+|.--..++..++..+++.++
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIGLiLl 178 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLF 178 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 46889999999998888887555555444444444433
No 334
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=27.21 E-value=2.2e+02 Score=19.76 Aligned_cols=42 Identities=14% Similarity=0.033 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHhhhcc-------hhHHHHHHHHHHHHHHHhhcchhH
Q 015136 72 GNLVGVYLWGLLSDNYGR-------KKGFLGIAMITSGIGLLSAFSPNY 113 (412)
Q Consensus 72 ~~~i~~~~~g~l~dr~Gr-------r~~~~~~~~~~~i~~~~~~~~~~~ 113 (412)
+...+.+..+++.+|..+ ++.+..+.++...+..+++...|.
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 444566777777777665 778888888888888777765543
No 335
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=27.20 E-value=1.1e+02 Score=28.82 Aligned_cols=79 Identities=14% Similarity=0.039 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 015136 27 FAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLL 106 (412)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 106 (412)
.+.+.+..+...+......+ ..+..+.|++.++...+.+.-.+...++.++--....+.|-|-....+.-...++...
T Consensus 18 ~~~lglQH~lamfg~~V~VP--livg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i 95 (451)
T COG2233 18 LLLLGLQHLLAMFGATVLVP--LLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMI 95 (451)
T ss_pred HHHHHHHHHHHHHhcchHhh--HHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHH
Confidence 34445555555444333222 2346778999999999999999999999988777444566565555555555555443
Q ss_pred h
Q 015136 107 S 107 (412)
Q Consensus 107 ~ 107 (412)
.
T Consensus 96 ~ 96 (451)
T COG2233 96 A 96 (451)
T ss_pred H
Confidence 3
No 336
>PF07556 DUF1538: Protein of unknown function (DUF1538); InterPro: IPR011435 This family of protenis of unknown function contains several conserved glycines and phenylalanines.
Probab=26.21 E-value=3.8e+02 Score=22.42 Aligned_cols=86 Identities=16% Similarity=0.145 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHHHhhhcCcc-ccceeeee--ecccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 015136 111 PNYISLVTLRGLVGIGIGSG-PVFSAWFL--EFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVMITLNWRWLLALSSIP 187 (412)
Q Consensus 111 ~~~~~~~~~r~l~G~~~g~~-~~~~~~i~--~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~~ 187 (412)
++.+.++..-++.|+..... |....+.. |...+.+..+..=....+.++|..++--+...+ ++|+..+++....
T Consensus 60 ~~~~~l~~~gf~lGf~~t~AEPal~vL~~qve~vs~G~i~~~~l~~~vaiGVg~~i~lg~lRIi---~g~~l~~~l~~~Y 136 (212)
T PF07556_consen 60 GSLWLLLLFGFVLGFLVTIAEPALRVLADQVEEVSGGSIPKSVLILAVAIGVGIFIALGMLRII---FGIPLWYFLIPGY 136 (212)
T ss_pred CCcEEeHHHHHHHHHHHHhhCcHHHHHHHHHHHhCcCCcchhHHHHHHHHHHHHHHHHHHHHHH---hCCcHHHHHHHHH
Confidence 45667777788888888776 76655443 333332323333344445555555544444444 4666554444333
Q ss_pred HHHHHHHHHhccC
Q 015136 188 SFAVLLLYSLAPE 200 (412)
Q Consensus 188 ~~~~~~~~~~~~~ 200 (412)
.+ .+++.++.|+
T Consensus 137 ~l-~~~l~~f~p~ 148 (212)
T PF07556_consen 137 IL-VLILTFFSPE 148 (212)
T ss_pred HH-HHHHHHhcCH
Confidence 22 3334445543
No 337
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=25.91 E-value=3.4e+02 Score=25.43 Aligned_cols=97 Identities=8% Similarity=-0.018 Sum_probs=55.7
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH-hhcchhHHHHHHHHHHHhhhcCcc
Q 015136 52 KSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLL-SAFSPNYISLVTLRGLVGIGIGSG 130 (412)
Q Consensus 52 ~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~r~l~G~~~g~~ 130 (412)
.... .++++...+.+.-.+...++.++-+...++. -|-....|.....++... .....++.....+-++.|+.....
T Consensus 30 ~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~-~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl~~~ll 107 (415)
T TIGR00801 30 GLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQ-IGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGLVYTLL 107 (415)
T ss_pred hccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-eeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 3445 8899999999999999999999998877654 222222222212222221 222234455555555555554443
Q ss_pred -cc----ceeeeeecccccchhhHH
Q 015136 131 -PV----FSAWFLEFVPAAKRGMWM 150 (412)
Q Consensus 131 -~~----~~~~i~~~~~~~~r~~~~ 150 (412)
.. ...++.+.+|+.-++...
T Consensus 108 ~~~~~~~~~~~i~~~~Pp~v~g~iv 132 (415)
T TIGR00801 108 SLLIKKLGPRWLMKLFPPVVTGPVV 132 (415)
T ss_pred HHHHHHhhHHHHHhcCCchhHHHhH
Confidence 21 123456778887776544
No 338
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=25.21 E-value=4.8e+02 Score=23.02 Aligned_cols=24 Identities=17% Similarity=0.145 Sum_probs=13.8
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHH
Q 015136 350 IIVDRAGRKLSLTIMLILVFICIL 373 (412)
Q Consensus 350 ~l~dr~grr~~l~~~~~~~~~~~~ 373 (412)
++-||+.|-....++....++...
T Consensus 119 flkErls~~Q~iAV~lA~~GV~~~ 142 (293)
T COG2962 119 FLKERLSRLQWIAVGLAAAGVLIQ 142 (293)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHH
Confidence 456777776665555555444443
No 339
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=24.73 E-value=2.9e+02 Score=20.28 Aligned_cols=9 Identities=0% Similarity=0.176 Sum_probs=4.0
Q ss_pred HhhchhhHH
Q 015136 353 DRAGRKLSL 361 (412)
Q Consensus 353 dr~grr~~l 361 (412)
.|++|-+..
T Consensus 6 ~KiN~~R~~ 14 (114)
T PF11023_consen 6 SKINKIRTF 14 (114)
T ss_pred hHHHHHHHH
Confidence 345544443
No 340
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=24.21 E-value=6.5e+02 Score=25.72 Aligned_cols=54 Identities=19% Similarity=-0.027 Sum_probs=34.4
Q ss_pred HHHHHHHHhh----hcchhHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHhhhcCcc
Q 015136 77 VYLWGLLSDN----YGRKKGFLGIAMITSGIGLLSAFSP-NYISLVTLRGLVGIGIGSG 130 (412)
Q Consensus 77 ~~~~g~l~dr----~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~r~l~G~~~g~~ 130 (412)
+.+++-+.|. -||.+-++++.++++++++...+.. ..+.+...-++.+++.++.
T Consensus 40 G~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 40 GIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred hhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 3444556663 3567788888888888887776544 4455555566666666554
No 341
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=24.05 E-value=4.1e+02 Score=21.88 Aligned_cols=41 Identities=39% Similarity=0.486 Sum_probs=19.7
Q ss_pred HHHHcchhhHHHHHHHHHH---hhchhhHHHHHHHHHHHHHHHH
Q 015136 335 FLASLGELPGLVLAGIIVD---RAGRKLSLTIMLILVFICILPL 375 (412)
Q Consensus 335 ~~~~~~~~~g~~~~g~l~d---r~grr~~l~~~~~~~~~~~~~l 375 (412)
...-++-++|..+++.+.+ +..+|+.......+..+.++..
T Consensus 53 ~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll~~~ 96 (209)
T PF06912_consen 53 LLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILLLIA 96 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHH
Confidence 3344455667777777733 2333444444444444443333
No 342
>COG4721 ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]
Probab=23.75 E-value=3.8e+02 Score=21.32 Aligned_cols=147 Identities=10% Similarity=0.059 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 015136 26 VFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGL 105 (412)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 105 (412)
+...+.+.+-..+..+..++.+......-.++.+..-+....+..++..++.+ ...|-| .-+++-++.+..-.
T Consensus 12 i~svlsi~fgvvfl~w~~~~~v~at~lhp~ale~~~~~i~~GiW~maavi~~l----~IpkpG---aAl~~Ev~Aa~ve~ 84 (192)
T COG4721 12 ILSVLSIVFGVVFLGWGYVGNVLATLLHPLALEPFANEILFGIWFMAAVIAAL----FIPKPG---AALIGEVLAALVEV 84 (192)
T ss_pred HHHHHHHHHHhheeehhhhhHHHHHhcchhhcCccccchHHHHHHHHHHHeee----eecCCc---HHHHHHHHHHHHHH
Confidence 33333343333444445555555555444446665556666666665554443 333322 33455555555544
Q ss_pred HhhcchhHHHHHHHHHHHhhhcCccccceeeeeecccccchhhHH-HHHHHHHHHHHHHHH-HHHHHHHhcCChHHHHHH
Q 015136 106 LSAFSPNYISLVTLRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWM-VIFSTFWTLGSIFEA-ALAWIVMITLNWRWLLAL 183 (412)
Q Consensus 106 ~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~-~~~~~~~~~g~~~~~-~~~~~l~~~~~w~~~~~~ 183 (412)
+.+--... .-++.-+.||+|.-.......+ ++++... .+..++.+++..+-- ...+++....+|...+..
T Consensus 85 ll~sqfgi-~tivsgfvQGlgaE~vFa~~ky-------r~~Sl~~~mlagmg~~~~sf~~eyf~~Gyla~s~~fnli~lv 156 (192)
T COG4721 85 LLGSQFGI-GTIVSGFVQGLGAEFVFAVTKY-------RYYSLPVLMLAGMGITLASFVYEYFKLGYLAFSLGFNLILLV 156 (192)
T ss_pred HHcCCCCc-hHHHHHHHHhhhhhHHHHHHHH-------HHhhHHHHHHHhhchhHHHHHHHHHHHhHHhhccchhHHHHH
Confidence 44322222 2345677888876554211111 1222211 122333333333222 223566667788776655
Q ss_pred HHHH
Q 015136 184 SSIP 187 (412)
Q Consensus 184 ~~~~ 187 (412)
.-.+
T Consensus 157 ~rlI 160 (192)
T COG4721 157 VRLI 160 (192)
T ss_pred HHHH
Confidence 4433
No 343
>PRK11588 hypothetical protein; Provisional
Probab=23.39 E-value=6.9e+02 Score=24.24 Aligned_cols=49 Identities=10% Similarity=0.007 Sum_probs=26.0
Q ss_pred HHHHHhhhcchh--HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcC
Q 015136 80 WGLLSDNYGRKK--GFLGIAMITSGIGLLSAFSPNYISLVTLRGLVGIGIG 128 (412)
Q Consensus 80 ~g~l~dr~Grr~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~g 128 (412)
.+++.+|++.|. .+.+.+++++++....+.++....++-.-.......|
T Consensus 136 i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i~f~pi~v~l~~alG 186 (506)
T PRK11588 136 ILALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAIAFAIIIAPLMVRLG 186 (506)
T ss_pred HHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC
Confidence 367788887774 3344555556655555655544444433333333333
No 344
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=22.61 E-value=3e+02 Score=19.85 Aligned_cols=20 Identities=30% Similarity=0.484 Sum_probs=10.9
Q ss_pred HhhchhhHHHHHHHHHHHHH
Q 015136 353 DRAGRKLSLTIMLILVFICI 372 (412)
Q Consensus 353 dr~grr~~l~~~~~~~~~~~ 372 (412)
+|+.+|+.........++..
T Consensus 84 er~~~~~~~a~~l~~~Gv~l 103 (113)
T PF13536_consen 84 ERLSPRRWLAILLILIGVIL 103 (113)
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 56777766655444444433
No 345
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=22.51 E-value=2e+02 Score=22.06 Aligned_cols=26 Identities=15% Similarity=0.065 Sum_probs=18.8
Q ss_pred eeecccccchhhHHHHHHHHHHHHHH
Q 015136 137 FLEFVPAAKRGMWMVIFSTFWTLGSI 162 (412)
Q Consensus 137 i~~~~~~~~r~~~~~~~~~~~~~g~~ 162 (412)
+.|++|+..|....+.+........-
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~k~ 85 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAVKS 85 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999888877765554333
No 346
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=22.47 E-value=4.1e+02 Score=21.30 Aligned_cols=31 Identities=23% Similarity=0.091 Sum_probs=14.0
Q ss_pred hhhcCCCcchh--HHHHHHHHHHHHHHHHHHHH
Q 015136 52 KSEWGVSPSAE--SLLSTVVFAGNLVGVYLWGL 82 (412)
Q Consensus 52 ~~~~~~s~~~~--~~~~s~~~~~~~i~~~~~g~ 82 (412)
..-+|+++-.+ ....+...+|+.+|..++..
T Consensus 69 ~~I~GlDP~~~~g~~t~a~g~lG~L~GP~~G~~ 101 (173)
T PF08566_consen 69 QQIMGLDPFMVYGLATLACGALGWLVGPSLGNQ 101 (173)
T ss_pred ccccCcCHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 33357776543 22233344444444444433
No 347
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=22.36 E-value=3e+02 Score=19.75 Aligned_cols=36 Identities=6% Similarity=0.137 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC----hHHHHHHHHH
Q 015136 151 VIFSTFWTLGSIFEAALAWIVMITLN----WRWLLALSSI 186 (412)
Q Consensus 151 ~~~~~~~~~g~~~~~~~~~~l~~~~~----w~~~~~~~~~ 186 (412)
|.......+..++|..++-++=+.++ |-..+++.++
T Consensus 46 g~IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 46 GLIGWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 33444444445555556666655555 4444444443
No 348
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=22.34 E-value=5.6e+02 Score=22.78 Aligned_cols=79 Identities=14% Similarity=0.069 Sum_probs=40.1
Q ss_pred cHHHHHHHHHHHHHHHhhHHHhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh---hcchhHHHHHHH
Q 015136 22 FQYLVFAYAGLAVFAEAMEIMILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVYLWGLLSDN---YGRKKGFLGIAM 98 (412)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr---~Grr~~~~~~~~ 98 (412)
++.+..+.+...+++.-+..+..+.-+.-+.+..+.-....++..++. ...++.+-.++ ||.||.=+++.+
T Consensus 22 r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~------A~~~a~r~~~~~~TfGy~R~eiLaa~ 95 (296)
T COG1230 22 RRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALI------AIKLARRPATKRFTFGYKRLEILAAF 95 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHH------HHHHhcCCCCCCCCccHhHHHHHHHH
Confidence 334444444455555444455555556677777776555444433322 22222333333 677776666665
Q ss_pred HHHHHHHH
Q 015136 99 ITSGIGLL 106 (412)
Q Consensus 99 ~~~i~~~~ 106 (412)
..++..+.
T Consensus 96 ~nav~Li~ 103 (296)
T COG1230 96 LNALLLIV 103 (296)
T ss_pred HHHHHHHH
Confidence 55554443
No 349
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=22.01 E-value=1.6e+02 Score=20.39 Aligned_cols=39 Identities=18% Similarity=0.214 Sum_probs=26.0
Q ss_pred HHhhcchhHHHHHHHHHHHhhhcCcc-ccceeeeeecccc
Q 015136 105 LLSAFSPNYISLVTLRGLVGIGIGSG-PVFSAWFLEFVPA 143 (412)
Q Consensus 105 ~~~~~~~~~~~~~~~r~l~G~~~g~~-~~~~~~i~~~~~~ 143 (412)
++.+--+--+-++++|.+.|-+.++. .+....+.|.-|.
T Consensus 23 ~L~s~Epit~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~pl 62 (89)
T PF04550_consen 23 VLASNEPITLRLFIGRVILGSAVSVVAGAALIQFPDLPPL 62 (89)
T ss_pred HHccCCCCchhHHhHHHHHhhHHHHHHHHHHhcCCCCCHH
Confidence 33333344566889999999888876 5555666666664
No 350
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=21.92 E-value=3.1e+02 Score=25.01 Aligned_cols=63 Identities=17% Similarity=0.067 Sum_probs=37.8
Q ss_pred hhhhhhhcCCC-cchhH----HHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc
Q 015136 48 GPAVKSEWGVS-PSAES----LLSTVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFS 110 (412)
Q Consensus 48 ~~~~~~~~~~s-~~~~~----~~~s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 110 (412)
.|...++++-+ +.+.. +.....++|..++..+.+++.|++|....+.+..+...++.+.....
T Consensus 55 ~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 55 SPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 34455555543 34433 44555556666666677788888888877777776666665544443
No 351
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=21.67 E-value=2.9e+02 Score=21.64 Aligned_cols=15 Identities=13% Similarity=0.390 Sum_probs=9.1
Q ss_pred HHHHhhchhhHHHHH
Q 015136 350 IIVDRAGRKLSLTIM 364 (412)
Q Consensus 350 ~l~dr~grr~~l~~~ 364 (412)
.++||+-||..+..+
T Consensus 56 ~Vs~RM~rRm~~~~G 70 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVG 70 (153)
T ss_pred HHHHHHHHHHHHHhc
Confidence 456777777555443
No 352
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=21.60 E-value=3.5e+02 Score=23.85 Aligned_cols=57 Identities=11% Similarity=-0.038 Sum_probs=29.2
Q ss_pred HHHHHHHHhhhcCccccceeeeeecccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015136 116 LVTLRGLVGIGIGSGPVFSAWFLEFVPAAKRGMWMVIFSTFWTLGSIFEAALAWIVM 172 (412)
Q Consensus 116 ~~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 172 (412)
.-..|.+.|+-.-.....++.++-.+|++++--..-=.....+++.++.|+++-.+.
T Consensus 22 ~~~lr~~~g~~~vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFVLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666655434455666666777544332222233344445555555554443
No 353
>KOG1484 consensus Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=21.44 E-value=6.1e+02 Score=22.93 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 015136 154 STFWTLGSIFEAALAWIVMITLNWRWLLALSSI 186 (412)
Q Consensus 154 ~~~~~~g~~~~~~~~~~l~~~~~w~~~~~~~~~ 186 (412)
..+-.+|. +|-.+...+++.+||.++=-++.+
T Consensus 214 VLaDtlgS-vGviist~Li~~~gw~~aDpicsl 245 (354)
T KOG1484|consen 214 VLADTLGS-VGVIISTLLIKLFGWMIADPICSL 245 (354)
T ss_pred HHHHHhcc-hHHHHHHHHHHhcCccchhHHHHH
Confidence 33334433 466778888888999877555543
No 354
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=21.03 E-value=2e+02 Score=23.59 Aligned_cols=47 Identities=17% Similarity=0.108 Sum_probs=26.8
Q ss_pred HhhhhhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHH---------HHHHHHhhhcchh
Q 015136 42 MILSFIGPAVKSEWGVSPSAESLLSTVVFAGNLVGVY---------LWGLLSDNYGRKK 91 (412)
Q Consensus 42 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~i~~~---------~~g~l~dr~Grr~ 91 (412)
..++.+.|.+.+ .+..+.......+.+..++.+. ..+...||+||+-
T Consensus 111 DNigIYiP~Fa~---~s~~~l~v~l~vF~ilv~v~c~la~~l~~~p~i~~~leryg~~l 166 (191)
T PF03596_consen 111 DNIGIYIPLFAS---LSLAELIVILIVFLILVGVWCFLAYKLARIPIIAEFLERYGRWL 166 (191)
T ss_pred CeEEEeehhhhc---CCHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHhcccH
Confidence 456677777765 3455555555555554444443 3445556777763
No 355
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=20.73 E-value=3.7e+02 Score=20.95 Aligned_cols=50 Identities=16% Similarity=-0.094 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 015136 67 TVVFAGNLVGVYLWGLLSDNYGRKKGFLGIAMITSGIGLLSAFSPNYISLVTLRGL 122 (412)
Q Consensus 67 s~~~~~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 122 (412)
-.+.++..+.+...=.+..|..||+.=.++.- ++-+.++|..++.++.++
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giS------i~Gai~HN~gQl~va~~i 117 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGIS------IAGAIAHNIGQLIVASLI 117 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHHH------HHHHHHHHHHHHHHHHHH
Confidence 45667777778888888888877664443322 223445677766666554
No 356
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=20.51 E-value=2.7e+02 Score=25.69 Aligned_cols=14 Identities=21% Similarity=0.218 Sum_probs=6.9
Q ss_pred ccceeeeeeccccc
Q 015136 131 PVFSAWFLEFVPAA 144 (412)
Q Consensus 131 ~~~~~~i~~~~~~~ 144 (412)
+..+-++.|.+=.+
T Consensus 253 ~ii~~i~~E~~L~~ 266 (374)
T PF01528_consen 253 SIIYLIVIEVVLAR 266 (374)
T ss_pred HHHHHHHHHHHHHH
Confidence 44445555655433
No 357
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=20.44 E-value=44 Score=25.29 Aligned_cols=16 Identities=31% Similarity=0.594 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHHH
Q 015136 178 RWLLALSSIPSFAVLL 193 (412)
Q Consensus 178 ~~~~~~~~~~~~~~~~ 193 (412)
||++++..++.+++++
T Consensus 1 RW~l~~iii~~i~l~~ 16 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFL 16 (130)
T ss_pred CeeeHHHHHHHHHHHH
Confidence 4555554444444333
No 358
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=20.40 E-value=3.6e+02 Score=23.97 Aligned_cols=21 Identities=24% Similarity=0.313 Sum_probs=13.9
Q ss_pred HHHHHHHhhchhhHHHHHHHH
Q 015136 347 LAGIIVDRAGRKLSLTIMLIL 367 (412)
Q Consensus 347 ~~g~l~dr~grr~~l~~~~~~ 367 (412)
+-.++.|+-||...++.++++
T Consensus 293 l~ay~~D~~gR~wa~lAG~lC 313 (336)
T PF07168_consen 293 LKAYLKDWNGRGWAFLAGLLC 313 (336)
T ss_pred HHHHhhccCCccHHHHHHHHH
Confidence 445778888877766665543
Done!