Query 015137
Match_columns 412
No_of_seqs 222 out of 1630
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 07:20:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015137.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015137hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 1.2E-94 4E-99 729.6 45.1 393 18-412 3-399 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 6.3E-91 2.1E-95 707.8 46.2 407 2-412 13-426 (520)
3 3ifg_A Succinate-semialdehyde 100.0 1.5E-90 5.1E-95 700.5 45.5 388 21-412 12-400 (484)
4 3rh9_A Succinate-semialdehyde 100.0 4.4E-90 1.5E-94 699.5 47.4 390 19-412 9-400 (506)
5 2o2p_A Formyltetrahydrofolate 100.0 1.5E-89 5.3E-94 697.2 45.8 391 22-412 37-431 (517)
6 3b4w_A Aldehyde dehydrogenase; 100.0 3.7E-89 1.3E-93 692.1 47.5 391 20-412 7-399 (495)
7 3u4j_A NAD-dependent aldehyde 100.0 3.8E-89 1.3E-93 696.0 47.4 390 19-412 20-414 (528)
8 1bxs_A Aldehyde dehydrogenase; 100.0 3.4E-89 1.2E-93 692.7 46.7 391 22-412 21-412 (501)
9 4f3x_A Putative aldehyde dehyd 100.0 2E-89 7E-94 693.9 45.0 389 18-412 22-413 (498)
10 3ek1_A Aldehyde dehydrogenase; 100.0 1.4E-89 5E-94 695.3 43.7 386 21-412 32-418 (504)
11 1a4s_A ALDH, betaine aldehyde 100.0 8.1E-89 2.8E-93 690.9 47.8 391 17-412 15-412 (503)
12 3k2w_A Betaine-aldehyde dehydr 100.0 4.2E-89 1.4E-93 692.6 43.9 392 17-412 8-404 (497)
13 3i44_A Aldehyde dehydrogenase; 100.0 1.1E-88 3.9E-93 688.3 46.3 391 17-412 21-415 (497)
14 3iwj_A Putative aminoaldehyde 100.0 9.4E-89 3.2E-93 691.0 45.7 391 20-412 6-405 (503)
15 1o04_A Aldehyde dehydrogenase, 100.0 2E-88 6.9E-93 687.0 45.1 391 22-412 20-411 (500)
16 4e4g_A Methylmalonate-semialde 100.0 1.2E-88 4.2E-93 691.2 42.6 390 18-412 23-418 (521)
17 2imp_A Lactaldehyde dehydrogen 100.0 3.9E-88 1.3E-92 683.6 45.7 389 20-412 5-395 (479)
18 3r31_A BADH, betaine aldehyde 100.0 1.6E-88 5.4E-93 689.7 42.5 387 18-412 11-404 (517)
19 1wnd_A Putative betaine aldehy 100.0 3.9E-88 1.3E-92 684.1 44.6 394 13-412 15-411 (495)
20 3jz4_A Succinate-semialdehyde 100.0 4.6E-88 1.6E-92 683.4 45.1 389 20-412 8-397 (481)
21 2ve5_A BADH, betaine aldehyde 100.0 5E-88 1.7E-92 685.1 45.1 394 16-412 1-399 (490)
22 2d4e_A 5-carboxymethyl-2-hydro 100.0 5.1E-88 1.7E-92 686.9 45.0 387 21-412 26-421 (515)
23 3qan_A 1-pyrroline-5-carboxyla 100.0 7.4E-88 2.5E-92 687.9 45.5 386 20-412 36-429 (538)
24 3prl_A NADP-dependent glyceral 100.0 1.3E-87 4.3E-92 681.9 44.7 383 20-412 10-398 (505)
25 2j6l_A Aldehyde dehydrogenase 100.0 7.4E-87 2.5E-91 676.6 45.6 398 8-412 9-412 (500)
26 4dng_A Uncharacterized aldehyd 100.0 7.2E-87 2.4E-91 675.8 43.6 387 19-412 4-393 (485)
27 3r64_A NAD dependent benzaldeh 100.0 1.1E-86 3.8E-91 676.5 44.6 386 19-412 10-400 (508)
28 2w8n_A Succinate-semialdehyde 100.0 5.4E-87 1.8E-91 675.6 41.7 384 22-412 13-402 (487)
29 3pqa_A Lactaldehyde dehydrogen 100.0 1.7E-86 5.7E-91 670.7 42.1 375 24-412 2-380 (486)
30 1t90_A MMSDH, probable methylm 100.0 2.5E-86 8.6E-91 671.0 43.0 387 20-412 4-393 (486)
31 1euh_A NADP dependent non phos 100.0 2.8E-86 9.5E-91 669.4 42.5 381 20-412 3-389 (475)
32 3ty7_A Putative aldehyde dehyd 100.0 2.2E-86 7.4E-91 671.1 40.6 387 19-412 5-394 (478)
33 1uzb_A 1-pyrroline-5-carboxyla 100.0 4.3E-86 1.5E-90 673.4 42.3 385 21-412 37-429 (516)
34 3ros_A NAD-dependent aldehyde 100.0 5.7E-86 2E-90 666.5 41.8 370 38-412 5-374 (484)
35 1uxt_A Glyceraldehyde-3-phosph 100.0 7.6E-86 2.6E-90 668.8 41.6 382 20-412 17-407 (501)
36 3ju8_A Succinylglutamic semial 100.0 2.9E-85 9.8E-90 663.9 45.4 383 23-412 7-392 (490)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 6.7E-85 2.3E-89 667.4 41.8 387 20-412 62-459 (563)
38 3etf_A Putative succinate-semi 100.0 3.4E-83 1.2E-87 645.6 42.0 373 35-412 5-377 (462)
39 4f9i_A Proline dehydrogenase/d 100.0 2.8E-82 9.6E-87 681.3 43.0 387 20-412 530-923 (1026)
40 2y53_A Aldehyde dehydrogenase 100.0 3.7E-82 1.3E-86 647.5 38.1 383 21-412 7-415 (534)
41 4h7n_A Aldehyde dehydrogenase; 100.0 8.2E-82 2.8E-86 636.6 37.3 371 34-412 3-376 (474)
42 3lns_A Benzaldehyde dehydrogen 100.0 5.8E-78 2E-82 605.9 39.9 361 37-412 6-370 (457)
43 3v4c_A Aldehyde dehydrogenase 100.0 3.1E-78 1.1E-82 617.6 35.7 373 19-412 27-424 (528)
44 1ez0_A ALDH, aldehyde dehydrog 100.0 1E-76 3.6E-81 604.0 35.5 362 33-412 3-389 (510)
45 3sza_A Aldehyde dehydrogenase, 100.0 6E-76 2E-80 591.7 39.5 344 56-412 15-362 (469)
46 3haz_A Proline dehydrogenase; 100.0 7.3E-74 2.5E-78 614.8 37.3 351 53-412 544-898 (1001)
47 3k9d_A LMO1179 protein, aldehy 100.0 2.2E-66 7.4E-71 522.7 24.0 336 52-412 5-353 (464)
48 3my7_A Alcohol dehydrogenase/a 100.0 2E-66 6.9E-71 521.3 23.2 333 53-412 1-348 (452)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 7.3E-66 2.5E-70 517.2 20.9 320 40-412 10-347 (463)
50 1vlu_A Gamma-glutamyl phosphat 100.0 4.6E-64 1.6E-68 504.8 15.3 313 59-412 14-352 (468)
51 4ghk_A Gamma-glutamyl phosphat 100.0 7.7E-61 2.6E-65 479.4 26.1 305 58-412 25-351 (444)
52 1o20_A Gamma-glutamyl phosphat 100.0 7.3E-61 2.5E-65 477.3 22.5 303 58-412 13-334 (427)
53 4gic_A HDH, histidinol dehydro 92.5 7.9 0.00027 37.2 22.9 239 76-330 26-298 (423)
54 1b93_A Protein (methylglyoxal 62.7 17 0.00059 29.7 6.3 114 161-300 12-135 (152)
55 3v4g_A Arginine repressor; vib 62.2 31 0.0011 29.0 7.9 40 184-226 114-153 (180)
56 1kae_A HDH, histidinol dehydro 53.6 1.6E+02 0.0055 28.3 22.2 191 123-330 88-292 (434)
57 3v42_A Folliculin; tumor suppr 53.0 15 0.00051 32.2 4.6 69 177-253 21-89 (226)
58 3lap_A Arginine repressor; arg 49.5 1.1E+02 0.0038 25.3 11.0 40 183-226 108-147 (170)
59 1vmd_A MGS, methylglyoxal synt 49.3 19 0.00065 30.2 4.5 119 156-300 22-151 (178)
60 2yvq_A Carbamoyl-phosphate syn 43.5 22 0.00075 28.6 4.0 63 206-270 60-132 (143)
61 3fxd_A Protein ICMQ; helix bun 42.5 72 0.0024 21.1 5.4 46 57-108 6-51 (57)
62 2xw6_A MGS, methylglyoxal synt 37.0 13 0.00044 29.8 1.5 87 172-269 16-111 (134)
63 1b4b_A Arginine repressor; cor 34.6 79 0.0027 21.9 5.2 56 186-258 12-67 (71)
64 2zfz_A Arginine repressor; DNA 33.7 86 0.0029 22.2 5.4 37 186-226 20-56 (79)
65 1xxa_A ARGR, arginine represso 31.6 62 0.0021 23.0 4.3 38 186-226 14-51 (78)
66 2ioj_A Hypothetical protein AF 30.7 36 0.0012 27.0 3.3 43 217-259 53-95 (139)
67 2p5m_A Arginine repressor; alp 30.2 77 0.0026 22.7 4.7 56 186-258 24-79 (83)
68 3iwt_A 178AA long hypothetical 29.4 71 0.0024 26.4 5.1 53 199-251 39-94 (178)
69 1y5e_A Molybdenum cofactor bio 28.1 50 0.0017 27.2 3.8 53 199-251 30-85 (169)
70 3pzy_A MOG; ssgcid, seattle st 27.8 64 0.0022 26.5 4.4 51 200-251 27-79 (164)
71 1use_A VAsp, vasodilator-stimu 27.6 79 0.0027 19.9 3.6 28 85-112 13-40 (45)
72 2v9v_A Selenocysteine-specific 27.3 68 0.0023 24.9 4.4 80 290-372 36-124 (135)
73 2l82_A Designed protein OR32; 24.9 88 0.003 23.7 4.2 104 241-370 5-108 (162)
74 3rfq_A Pterin-4-alpha-carbinol 23.2 69 0.0024 26.9 3.8 53 200-252 49-103 (185)
75 3u3x_A Oxidoreductase; structu 22.0 4.5E+02 0.015 24.0 9.8 140 163-335 29-170 (361)
76 3mwd_B ATP-citrate synthase; A 21.0 4.8E+02 0.016 24.0 9.4 87 184-276 166-264 (334)
77 1b4a_A Arginine repressor; hel 20.6 1.5E+02 0.0051 23.9 5.2 56 186-258 90-145 (149)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.2e-94 Score=729.61 Aligned_cols=393 Identities=42% Similarity=0.733 Sum_probs=375.5
Q ss_pred CccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015137 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (412)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (412)
.++..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|+
T Consensus 3 ~~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~ 80 (490)
T 2wme_A 3 RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILR 80 (490)
T ss_dssp CSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence 34556899999999988899999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeeccCCccceeeecCCceEEEECCCchhHHhhH
Q 015137 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (412)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (412)
+|+++|++++++|+|||+.+++..|+..+++.++||+.+++++.+...+...+...+++++|+|||++|+|||||+++.+
T Consensus 81 ~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~ 160 (490)
T 2wme_A 81 ERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIAL 160 (490)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhh
Confidence 99999999999999999999987569999999999999998887777666667778899999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHH
Q 015137 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (412)
Q Consensus 178 ~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (412)
+++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.++++.|++||+||.|+||||+.+|++|++.
T Consensus 161 ~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 240 (490)
T 2wme_A 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 240 (490)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred hhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999876
Q ss_pred HHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCC
Q 015137 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (412)
Q Consensus 258 a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~ 337 (412)
++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.+
T Consensus 241 ~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~ 320 (490)
T 2wme_A 241 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQD 320 (490)
T ss_dssp HHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCcc
Confidence 65478999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCC----CCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+++++|||+++.+++++.++|++++++||++++||.+.. .+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 321 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 399 (490)
T 2wme_A 321 ENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYD 399 (490)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeC
Confidence 999999999999999999999999999999999998642 368999999999999999999999999999999996
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=6.3e-91 Score=707.83 Aligned_cols=407 Identities=38% Similarity=0.653 Sum_probs=376.9
Q ss_pred CCCCCCccccccccCCCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhc--ccCCCCC
Q 015137 2 EGSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPR 79 (412)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~--~~~~w~~ 79 (412)
|||++...-.+-|........++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| . .|+.
T Consensus 13 ~~~~~~~~~~~~m~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~ 90 (520)
T 3ed6_A 13 LGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQ 90 (520)
T ss_dssp ------CHHHHHHHHGGGSCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTT
T ss_pred cCCCCccccccccccccccCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--cccc
Confidence 34555544444433333445679999999988788899999999999999999999999999999999999 8 8999
Q ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeecc-CCccceeeec
Q 015137 80 FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLRE 158 (412)
Q Consensus 80 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 158 (412)
++..+|.++|+++++.|++++++|++++++|+|||+.+++. |+..+++.++|++.++++..+...+.. .+...+++++
T Consensus 91 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 169 (520)
T 3ed6_A 91 ETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKE 169 (520)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCccccccc
Confidence 99999999999999999999999999999999999999997 999999999999999988766554433 4567789999
Q ss_pred CCceEEEECCCchhHHhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCC
Q 015137 159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMD 238 (412)
Q Consensus 159 P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~ 238 (412)
|+|||++|+|||||+.+.+++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|++||+
T Consensus 170 P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~ 249 (520)
T 3ed6_A 170 PVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKE 249 (520)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTT
T ss_pred CccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987789999999999
Q ss_pred cCEEEeeCChHHHHHHHHHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHH
Q 015137 239 IDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318 (412)
Q Consensus 239 v~~v~ftGs~~~g~~i~~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~ 318 (412)
||.|+||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+
T Consensus 250 vd~V~FTGS~~vG~~i~~~aa-~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~ 328 (520)
T 3ed6_A 250 VDLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDK 328 (520)
T ss_dssp CSEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHH
T ss_pred cCEEEEECCHHHHHHHHHHhh-hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHH
Confidence 999999999999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCC----CCCceEeeEEEeeCCCCC
Q 015137 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDM 394 (412)
Q Consensus 319 f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~ 394 (412)
|+++|+++++++++|+|+++++++||++++.+++++.++|++++++||++++||.... ..|+|++|||+.+++++|
T Consensus 329 f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~ 408 (520)
T 3ed6_A 329 FEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSM 408 (520)
T ss_dssp HHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTS
T ss_pred HHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998642 469999999999999999
Q ss_pred cccccCcccceeEEEEeC
Q 015137 395 LIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 395 ~i~~~E~fgPv~~v~~~~ 412 (412)
++++||+||||++|++|+
T Consensus 409 ~i~~eEiFGPVl~v~~~~ 426 (520)
T 3ed6_A 409 RIVQEEVFGPVVTVEGFE 426 (520)
T ss_dssp HHHHSCCCSSEEEEEEES
T ss_pred ccccCceeCcEEEEEEeC
Confidence 999999999999999995
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.5e-90 Score=700.51 Aligned_cols=388 Identities=37% Similarity=0.627 Sum_probs=371.2
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015137 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (412)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (412)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45689999999877788999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeecc-CCccceeeecCCceEEEECCCchhHHhhHHH
Q 015137 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (412)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (412)
++|++++++|+|||+.+++. |+..+++.++||+.++++..+...+.. .+...+++++|+|||++|+|||||+.+.+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 99999999999999999997 999999999999999887665554432 4567889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHH
Q 015137 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (412)
Q Consensus 180 ~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~ 259 (412)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|++||+||.|+||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999987789999999999999999999999999999999
Q ss_pred hCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCC
Q 015137 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (412)
Q Consensus 260 ~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~ 339 (412)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++
T Consensus 249 -~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 -PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp -GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred -ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+++|||+++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFA 400 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEEC
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeC
Confidence 9999999999999999999999999999999998754479999999999999999999999999999999996
No 4
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=4.4e-90 Score=699.47 Aligned_cols=390 Identities=32% Similarity=0.584 Sum_probs=372.6
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015137 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (412)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (412)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|+++++.|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4556899999999987889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeeccCCccceeee-cCCceEEEECCCchhHHhhH
Q 015137 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFF 177 (412)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~P~~~~~ 177 (412)
++++|++++++|+|||+.+++. |+..+++.++++++++++..+...+...+...++++ +|+|||++|+|||||+.+.+
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQG-EVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 9999999999999999999996 999999999999999988776655433456678888 99999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHH
Q 015137 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (412)
Q Consensus 178 ~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (412)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887899999999999999999999999999999
Q ss_pred HHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCC
Q 015137 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (412)
Q Consensus 258 a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~ 337 (412)
++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 246 aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TT-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hh-hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 98 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCC-CCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+++++||++++++++++.++|++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFR 400 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeC
Confidence 9999999999999999999999999999999999976333 79999999999999999999999999999999995
No 5
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=1.5e-89 Score=697.16 Aligned_cols=391 Identities=43% Similarity=0.800 Sum_probs=367.6
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015137 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (412)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (412)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||++|.|++++..+|.++|++++++|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999998766779999999999999999999999999999999999974459999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeecc----CCccceeeecCCceEEEECCCchhHHhhH
Q 015137 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (412)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (412)
+|++++++|+|||+.+++..|+..+++.++||++++++..+...+.. .+...+++++|+|||++|+|||||+...+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 99999999999999999733999999999999999887766544431 22356889999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHH
Q 015137 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (412)
Q Consensus 178 ~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (412)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877889999999999999999999999999998
Q ss_pred HHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCC
Q 015137 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (412)
Q Consensus 258 a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~ 337 (412)
++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||++
T Consensus 277 aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~ 356 (517)
T 2o2p_A 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE 356 (517)
T ss_dssp HHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred hHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 87457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+++++|||+++.+++++.++|++++++|+++++||......|+|++||||.+++++|++++||+||||++|++|+
T Consensus 357 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 431 (517)
T 2o2p_A 357 RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFA 431 (517)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEEC
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcC
Confidence 999999999999999999999999999999999998643369999999999999999999999999999999996
No 6
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.7e-89 Score=692.11 Aligned_cols=391 Identities=39% Similarity=0.683 Sum_probs=369.4
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015137 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (412)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (412)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||++|.|+.++..+|.++|+++++.|+++
T Consensus 7 ~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~ 86 (495)
T 3b4w_A 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAER 86 (495)
T ss_dssp ECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 44578999999987667899999999999999999999999999999999999744699999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeeccCCccceeeecCCceEEEECCCchhHHhhHHH
Q 015137 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (412)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (412)
+++|++++++|+|||+.+++..|+..+++.++|+++++++..+...+...+...+++++|+|||++|+|||||+...+++
T Consensus 87 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 87 KDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 99999999999999999997339999999999999999887766544333346788999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHH
Q 015137 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (412)
Q Consensus 180 ~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~ 259 (412)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|++|+++|.|+||||+.+|+.|++.++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 245 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 8789999999999999999999999999999999
Q ss_pred hCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCC
Q 015137 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (412)
Q Consensus 260 ~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~ 339 (412)
++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++++
T Consensus 246 -~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 324 (495)
T 3b4w_A 246 -EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPA 324 (495)
T ss_dssp -HTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTT
T ss_pred -hcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCC--CCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+++||++++++++++.++|++++++|+++++||.... ..|+|++||||.+++++|++++||+||||++|++|+
T Consensus 325 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 399 (495)
T 3b4w_A 325 AQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYD 399 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecC
Confidence 9999999999999999999999999999999997642 259999999999999999999999999999999996
No 7
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.8e-89 Score=695.95 Aligned_cols=390 Identities=42% Similarity=0.723 Sum_probs=372.5
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhc--ccCCCCCCCHHHHHHHHHHHHHH
Q 015137 19 IKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPRFSGAERRGIMLKFADL 95 (412)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~--~~~~w~~~~~~~R~~~L~~~a~~ 95 (412)
++..++||||+|+.+.++++++++||+| |+++++++.++.+|+++|+++|++|| . .|+.++..+|.++|+++++.
T Consensus 20 ~~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~ 97 (528)
T 3u4j_A 20 KSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADL 97 (528)
T ss_dssp CCBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHH
Confidence 3457899999999987788999999999 99999999999999999999999999 7 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeecc-CCccceeeecCCceEEEECCCchhHH
Q 015137 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTT 174 (412)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~ 174 (412)
|++++++|++++++|+|||..+++. |+..+++.++++++++++..+...+.. .+...+++++|+|||++|+|||||+.
T Consensus 98 l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 176 (528)
T 3u4j_A 98 ILARQEELALIESLEVGKPIAQARG-EIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFI 176 (528)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHH
Confidence 9999999999999999999999975 999999999999999988766555433 45668899999999999999999999
Q ss_pred hhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHH
Q 015137 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (412)
Q Consensus 175 ~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (412)
..++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|++||+||.|+||||+.+|+.|
T Consensus 177 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 256 (528)
T 3u4j_A 177 IASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKL 256 (528)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877899999999999999999999999999
Q ss_pred HHHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCC
Q 015137 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (412)
Q Consensus 255 ~~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~ 334 (412)
++.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+
T Consensus 257 ~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 335 (528)
T 3u4j_A 257 GEIAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGD 335 (528)
T ss_dssp HHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEEC
T ss_pred HHHHH-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCC
Confidence 99999 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCC-CCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 335 p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
|.++++++||++++++++++.++|++++++|+++++||..... .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 336 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 414 (528)
T 3u4j_A 336 PLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFK 414 (528)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeC
Confidence 9999999999999999999999999999999999999986533 79999999999999999999999999999999995
No 8
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=3.4e-89 Score=692.75 Aligned_cols=391 Identities=56% Similarity=0.956 Sum_probs=368.5
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHHHHHHHHHhH
Q 015137 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEHA 100 (412)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (412)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++| .|+.++..+|.++|+++++.|++++
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999987667899999999999999999999999999999999999732 4999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeeccCCccceeeecCCceEEEECCCchhHHhhHHHH
Q 015137 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (412)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~ 180 (412)
++|++++++|+|||+.++...|+..+++.++||++++++..+...+...+...+++++|+|||++|+|||||+...++++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI 180 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHH
Confidence 99999999999999998754599999999999999998876654443344567889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHHh
Q 015137 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (412)
Q Consensus 181 ~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~ 260 (412)
++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|++||+||.|+||||+.+|+.|++.++.
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 260 (501)
T 1bxs_A 181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 260 (501)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999998875
Q ss_pred CCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCCC
Q 015137 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (412)
Q Consensus 261 ~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~ 340 (412)
++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.++++
T Consensus 261 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 340 (501)
T 1bxs_A 261 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGV 340 (501)
T ss_dssp TTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTC
T ss_pred ccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
++||++++.+++++.++|++++++|+++++||......|+|++||||.+++++|++++||+||||++|++|+
T Consensus 341 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (501)
T 1bxs_A 341 SQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFK 412 (501)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred ccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeC
Confidence 999999999999999999999999999999997643469999999999999999999999999999999996
No 9
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=2e-89 Score=693.92 Aligned_cols=389 Identities=34% Similarity=0.609 Sum_probs=370.2
Q ss_pred CccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015137 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (412)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (412)
.+...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 22 ~~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 98 (498)
T 4f3x_A 22 SMMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIE 98 (498)
T ss_dssp -CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred hccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 3456789999999987666 999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhh-hcCcHHHHHHHHHHHHHhhhhhcCeeeec-cCCccceeeecCCceEEEECCCchhHHh
Q 015137 98 EHAEVLAVLEALDAGKLHSWA-KMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTM 175 (412)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a-~~~ev~~~i~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (412)
+++++|++++++|+|||..++ +. |+..+++.++||++++++..+...+. ..+...+++++|+|||++|+|||||+.+
T Consensus 99 ~~~~ela~~~~~e~Gk~~~ea~~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 177 (498)
T 4f3x_A 99 KEADEFAALEALNCGKPINAVKND-ELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMM 177 (498)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHT-HHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HhHHHHHHHHHHHhCCCHHHHhHH-HHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHH
Confidence 999999999999999999999 64 99999999999999998766554432 2456788999999999999999999999
Q ss_pred hHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHH
Q 015137 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (412)
Q Consensus 176 ~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (412)
.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+|++.++++.|++||+||.|+||||+.+|+.|+
T Consensus 178 ~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 256 (498)
T 4f3x_A 178 MAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVL 256 (498)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999998878999999999999999999999999999
Q ss_pred HHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCC
Q 015137 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (412)
Q Consensus 256 ~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p 335 (412)
+.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 257 ~~aa-~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 335 (498)
T 4f3x_A 257 AAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLD 335 (498)
T ss_dssp HHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCS
T ss_pred HHHH-hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCC
Confidence 9999 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCC-EEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
.++++++||++++.+++++.++|++++++|+ ++++||.....+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 336 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 413 (498)
T 4f3x_A 336 DDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFT 413 (498)
T ss_dssp SGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred ccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeC
Confidence 9999999999999999999999999999999 9999998654579999999999999999999999999999999995
No 10
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.4e-89 Score=695.35 Aligned_cols=386 Identities=39% Similarity=0.694 Sum_probs=369.6
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015137 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (412)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (412)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999887888999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeecc-CCccceeeecCCceEEEECCCchhHHhhHHH
Q 015137 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (412)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (412)
++|++++++|+|||+.+++. |+..+++.++||+.++++..+...+.. ++...++.++|+|||++|+|||||+.+.+++
T Consensus 110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999987 999999999999999887665544432 3466789999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHH
Q 015137 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (412)
Q Consensus 180 ~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~ 259 (412)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|++||+||.|+||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred hCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCC
Q 015137 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (412)
Q Consensus 260 ~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~ 339 (412)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 269 -~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 -PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp -GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred -hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+++||++++.+++++.++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 418 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFD 418 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEEC
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeC
Confidence 99999999999999999999999999999999976 369999999999999999999999999999999996
No 11
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=8.1e-89 Score=690.91 Aligned_cols=391 Identities=37% Similarity=0.680 Sum_probs=370.1
Q ss_pred CCccccceeEcCeEeeCCCCCe-EEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 015137 17 PEIKFTKLFINGEFVDSVSGKT-FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (412)
Q Consensus 17 ~~~~~~~~~i~G~~~~~~~~~~-~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~ 95 (412)
..+...++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.
T Consensus 15 ~~~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~ 92 (503)
T 1a4s_A 15 VVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARI 92 (503)
T ss_dssp CCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHH
T ss_pred ccccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHH
Confidence 3345577999999998766778 99999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeeccCCccceeeecCCceEEEECCCchhHHh
Q 015137 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTM 175 (412)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (412)
|++++++|++++++|+|||+.+++. |+..+++.++||++++++..++..+...+...++.++|+|||++|+|||||+..
T Consensus 93 l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 171 (503)
T 1a4s_A 93 IRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMI 171 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHH
Confidence 9999999999999999999999986 999999999999999988766544433344678899999999999999999999
Q ss_pred hHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHH
Q 015137 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (412)
Q Consensus 176 ~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (412)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+ ++++.|++||++|.|+||||+.+|+.|+
T Consensus 172 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 250 (503)
T 1a4s_A 172 AAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVM 250 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977 8899999999999999999999999999
Q ss_pred HHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCC
Q 015137 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (412)
Q Consensus 256 ~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p 335 (412)
+.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 251 ~~aa-~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 329 (503)
T 1a4s_A 251 EMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDP 329 (503)
T ss_dssp HHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhh-hcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccC--C----CCCceEeeEEEeeCCCCCcccccCcccceeEEE
Q 015137 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--G----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (412)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~ 409 (412)
.++++++||++++.+++++.++|++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 330 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 409 (503)
T 1a4s_A 330 LLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVL 409 (503)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred cccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEE
Confidence 9999999999999999999999999999999999999764 1 358999999999999999999999999999999
Q ss_pred EeC
Q 015137 410 KFK 412 (412)
Q Consensus 410 ~~~ 412 (412)
+|+
T Consensus 410 ~~~ 412 (503)
T 1a4s_A 410 PFD 412 (503)
T ss_dssp EEC
T ss_pred ecC
Confidence 996
No 12
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=4.2e-89 Score=692.59 Aligned_cols=392 Identities=35% Similarity=0.629 Sum_probs=371.2
Q ss_pred CCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHH
Q 015137 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (412)
Q Consensus 17 ~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l 96 (412)
.+++..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (497)
T 3k2w_A 8 LHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKI 85 (497)
T ss_dssp CCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHH
T ss_pred ccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence 345667899999999987788999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeec-cCCccceeeecCCceEEEECCCchhHHh
Q 015137 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTM 175 (412)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (412)
++++++|++++++|+|||..+++. |+..+++.++|++.++++..+...+. ..+...++.++|+|||++|+|||||+..
T Consensus 86 ~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 164 (497)
T 3k2w_A 86 RENKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLAL 164 (497)
T ss_dssp HTTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHH
Confidence 999999999999999999999996 99999999999999998876655443 2456778899999999999999999999
Q ss_pred hHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHH
Q 015137 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (412)
Q Consensus 176 ~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (412)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|++||+||.|+||||+.+|+.|+
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~ 244 (497)
T 3k2w_A 165 AGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIY 244 (497)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred HHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCC
Q 015137 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (412)
Q Consensus 256 ~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p 335 (412)
+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 245 ~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p 323 (497)
T 3k2w_A 245 KTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP 323 (497)
T ss_dssp HHHT-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhh-hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcc--CCC--CCceEeeEEEeeCCCCCcccccCcccceeEEEEe
Q 015137 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP--IGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (412)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (412)
+++++++||++++++++++.++|++++++|+++++||.. ... .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (497)
T 3k2w_A 324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV 403 (497)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEe
Confidence 999999999999999999999999999999999999973 222 6999999999999999999999999999999999
Q ss_pred C
Q 015137 412 K 412 (412)
Q Consensus 412 ~ 412 (412)
+
T Consensus 404 ~ 404 (497)
T 3k2w_A 404 S 404 (497)
T ss_dssp S
T ss_pred C
Confidence 5
No 13
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.1e-88 Score=688.30 Aligned_cols=391 Identities=36% Similarity=0.598 Sum_probs=366.4
Q ss_pred CCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHH
Q 015137 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (412)
Q Consensus 17 ~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l 96 (412)
.++...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|
T Consensus 21 ~m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l 98 (497)
T 3i44_A 21 SMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEIY 98 (497)
T ss_dssp -CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHH
T ss_pred ccccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHH
Confidence 344567899999999987788999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeeccCCccceee-ecCCceEEEECCCchhHHh
Q 015137 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL-REPIGVVGHIIPWNFPTTM 175 (412)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~P~~~ 175 (412)
++++++|++++++|+|||+.+++..|+..+++.++++++........... ..+...+++ ++|+|||++|+|||||+..
T Consensus 99 ~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 177 (497)
T 3i44_A 99 EKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLITPWNWPMNQ 177 (497)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEECCCcchHHH
Confidence 99999999999999999999998349999999999999877654332211 124457788 9999999999999999999
Q ss_pred hHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHH
Q 015137 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (412)
Q Consensus 176 ~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (412)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|++||+||.|+||||+.+|+.|+
T Consensus 178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~ 257 (497)
T 3i44_A 178 VTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDIS 257 (497)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998878999999999999999999999999999
Q ss_pred HHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCC
Q 015137 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (412)
Q Consensus 256 ~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p 335 (412)
+.++ +++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 258 ~~aa-~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 335 (497)
T 3i44_A 258 KNAS-NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPG 335 (497)
T ss_dssp HHHH-TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred HHHh-hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999 89999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc-cCC--CCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+++++++||++++.+++++.++|++++++|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 336 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 415 (497)
T 3i44_A 336 HQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFN 415 (497)
T ss_dssp TSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecC
Confidence 99999999999999999999999999999999999994 322 269999999999999999999999999999999996
No 14
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=9.4e-89 Score=690.99 Aligned_cols=391 Identities=44% Similarity=0.752 Sum_probs=369.6
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccC---CCCCCCHHHHHHHHHHHHHHH
Q 015137 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG---PWPRFSGAERRGIMLKFADLI 96 (412)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~~L~~~a~~l 96 (412)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||.++ .|+.++..+|.++|+++++.|
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l 85 (503)
T 3iwj_A 6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKV 85 (503)
T ss_dssp CCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHH
T ss_pred CCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHH
Confidence 45679999999998788899999999999999999999999999999999999732 699999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCee-eec---cCCccceeeecCCceEEEECCCchh
Q 015137 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKM---SRALQGYTLREPIGVVGHIIPWNFP 172 (412)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P 172 (412)
++++++|++++++|+|||..+++. |+..+++.++|++.+++++.+.. .+. ..+...+++++|+|||++|+|||||
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T 3iwj_A 86 TEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYP 164 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchH
Confidence 999999999999999999999987 99999999999999987664432 111 1345678999999999999999999
Q ss_pred HHhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHH
Q 015137 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252 (412)
Q Consensus 173 ~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~ 252 (412)
+.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||++|.|+||||+.+|+
T Consensus 165 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~ 244 (503)
T 3iwj_A 165 MLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGS 244 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHH
Confidence 99999999999999999999999999999999999999999999999999998778999999999999999999999999
Q ss_pred HHHHHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhccc
Q 015137 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (412)
Q Consensus 253 ~i~~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~ 332 (412)
.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 245 ~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (503)
T 3iwj_A 245 KIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKI 323 (503)
T ss_dssp HHHHHHG-GGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHh-cCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccC
Confidence 9999998 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCC--CCCceEeeEEEeeCCCCCcccccCcccceeEEEE
Q 015137 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410 (412)
Q Consensus 333 g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~ 410 (412)
|+|+++++++|||+++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 403 (503)
T 3iwj_A 324 SDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKT 403 (503)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEE
Confidence 99999999999999999999999999999999999999998643 4799999999999999999999999999999999
Q ss_pred eC
Q 015137 411 FK 412 (412)
Q Consensus 411 ~~ 412 (412)
|+
T Consensus 404 ~~ 405 (503)
T 3iwj_A 404 FS 405 (503)
T ss_dssp ES
T ss_pred eC
Confidence 95
No 15
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=2e-88 Score=686.95 Aligned_cols=391 Identities=55% Similarity=0.896 Sum_probs=368.1
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHHHHHHHHHhH
Q 015137 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEHA 100 (412)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (412)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+++ .|+.++..+|.++|+++++.|++++
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999987677899999999999999999999999999999999999621 4999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeeccCCccceeeecCCceEEEECCCchhHHhhHHHH
Q 015137 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (412)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~ 180 (412)
++|++++++|+|||+.++...|+..+++.++||++++++..+...+...+...+++++|+|||++|+|||||+.+.++++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 99999999999999998754599999999999999988776654443334567889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHHh
Q 015137 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (412)
Q Consensus 181 ~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~ 260 (412)
++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|++||+||.|+||||+.+|+.|++.++.
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 259 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999777899999999999999999999999999999875
Q ss_pred CCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCCC
Q 015137 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (412)
Q Consensus 261 ~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~ 340 (412)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.++++
T Consensus 260 ~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp TTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred hcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
++|||+++.+++++.++|++++++|+++++||......|+|++||||.+++++|++++||+||||++|++|+
T Consensus 340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 411 (500)
T 1o04_A 340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 411 (500)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeC
Confidence 999999999999999999999999999999997643469999999999999999999999999999999996
No 16
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.2e-88 Score=691.18 Aligned_cols=390 Identities=32% Similarity=0.462 Sum_probs=368.6
Q ss_pred CccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015137 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (412)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (412)
+|+..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|+++++.|+
T Consensus 23 ~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 100 (521)
T 4e4g_A 23 MMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLN 100 (521)
T ss_dssp -CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHH
T ss_pred hhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 35667899999999987788999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeec-cCCccceeeecCCceEEEECCCchhHHhh
Q 015137 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (412)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (412)
+++++|++++++|+|||..+++. |+..+++.++||+.+.+...+...+. ..+...+++++|+|||++|+|||||+.+.
T Consensus 101 ~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 179 (521)
T 4e4g_A 101 DNMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIP 179 (521)
T ss_dssp HHHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHH
Confidence 99999999999999999999987 99999999999998877665544332 24556789999999999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHH
Q 015137 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (412)
Q Consensus 177 ~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (412)
++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ .+.+..|+.||+||.|+||||+.+|+.|++
T Consensus 180 ~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~ 258 (521)
T 4e4g_A 180 MWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYG 258 (521)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999995 467799999999999999999999999999
Q ss_pred HHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecc-cHHHHHHHHHHHHhhcccCCC
Q 015137 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDP 335 (412)
Q Consensus 257 ~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-v~~~f~~~L~~~~~~~~~g~p 335 (412)
.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++|+|
T Consensus 259 ~aa-~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~ 337 (521)
T 4e4g_A 259 TAA-MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPY 337 (521)
T ss_dssp HHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCT
T ss_pred HHh-hcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCC
Confidence 999 899999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccC----CCCCceEeeEEEeeCCCCCcccccCcccceeEEEEe
Q 015137 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (412)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (412)
.++++++||++++++++++.++|++++++||++++||... ..+|+|++|||+.+++++|++++||+||||++|++|
T Consensus 338 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 417 (521)
T 4e4g_A 338 TDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRA 417 (521)
T ss_dssp TCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCB
T ss_pred CCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEe
Confidence 9999999999999999999999999999999999999752 246999999999999999999999999999999998
Q ss_pred C
Q 015137 412 K 412 (412)
Q Consensus 412 ~ 412 (412)
+
T Consensus 418 ~ 418 (521)
T 4e4g_A 418 R 418 (521)
T ss_dssp S
T ss_pred C
Confidence 5
No 17
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=3.9e-88 Score=683.60 Aligned_cols=389 Identities=33% Similarity=0.605 Sum_probs=368.8
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015137 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (412)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (412)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (479)
T 2imp_A 5 VQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRER 82 (479)
T ss_dssp EECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHH
Confidence 446789999999876678999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeecc-CCccceeeecCCceEEEECCCchhHHhhHH
Q 015137 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (412)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (412)
+++|++++++|+|||..+++. |+..+++.++++++++++..+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 161 (479)
T 2imp_A 83 ASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIAR 161 (479)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHH
Confidence 999999999999999999986 999999999999998877666554322 344678899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHH
Q 015137 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (412)
Q Consensus 179 ~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a 258 (412)
++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.++++.|++||++|.|+||||+.+|+.|++.+
T Consensus 162 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~a 241 (479)
T 2imp_A 162 KMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATA 241 (479)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997767899999999999999999999999999999
Q ss_pred HhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCC-
Q 015137 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD- 337 (412)
Q Consensus 259 ~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~- 337 (412)
+ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 242 a-~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 320 (479)
T 2imp_A 242 A-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAER 320 (479)
T ss_dssp H-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTC
T ss_pred h-ccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcccc
Confidence 9 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+++++|||+++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 321 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~ 395 (479)
T 2imp_A 321 NDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFD 395 (479)
T ss_dssp SSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEES
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeC
Confidence 999999999999999999999999999999999997632369999999999999999999999999999999995
No 18
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.6e-88 Score=689.72 Aligned_cols=387 Identities=39% Similarity=0.683 Sum_probs=368.3
Q ss_pred CccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015137 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (412)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (412)
++...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 88 (517)
T 3r31_A 11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMR 88 (517)
T ss_dssp TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHH
Confidence 44567899999999887888999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhh----hcCeeeeccCCccceeeecCCceEEEECCCchhH
Q 015137 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK----IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPT 173 (412)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (412)
+++++|++++++|+|||..++ |+..+++.+++++.++++ ..+...+...+. .+++++|+|||++|+|||||+
T Consensus 89 ~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~ 164 (517)
T 3r31_A 89 ERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQ 164 (517)
T ss_dssp HTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchH
Confidence 999999999999999999998 899999999999999887 666655543445 899999999999999999999
Q ss_pred HhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHH
Q 015137 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (412)
Q Consensus 174 ~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (412)
.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|++||+||.|+||||+.+|+.
T Consensus 165 ~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 243 (517)
T 3r31_A 165 QIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRK 243 (517)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 7789999999999999999999999999
Q ss_pred HHHHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccC
Q 015137 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (412)
Q Consensus 254 i~~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g 333 (412)
|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 244 i~~~aa-~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 322 (517)
T 3r31_A 244 VAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG 322 (517)
T ss_dssp HHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHhh-cCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 999999 8899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccC---CCCCceEeeEEEeeCCCCCcccccCcccceeEEEE
Q 015137 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI---GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410 (412)
Q Consensus 334 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~---~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~ 410 (412)
+|.++++++||++++++++++.++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++
T Consensus 323 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (517)
T 3r31_A 323 DPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLD 402 (517)
T ss_dssp CTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEE
T ss_pred CCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEE
Confidence 999999999999999999999999999999999999999312 13699999999999999999999999999999999
Q ss_pred eC
Q 015137 411 FK 412 (412)
Q Consensus 411 ~~ 412 (412)
|+
T Consensus 403 ~~ 404 (517)
T 3r31_A 403 FD 404 (517)
T ss_dssp EC
T ss_pred eC
Confidence 96
No 19
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=3.9e-88 Score=684.09 Aligned_cols=394 Identities=37% Similarity=0.616 Sum_probs=366.7
Q ss_pred cccCCCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHH
Q 015137 13 LFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKF 92 (412)
Q Consensus 13 ~~~~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~ 92 (412)
..|...+...++||||+|+.+.+ ++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++
T Consensus 15 ~~~~~~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~ 91 (495)
T 1wnd_A 15 LYKKAGLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKL 91 (495)
T ss_dssp -------CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHH
T ss_pred ccccccccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHH
Confidence 34445555578999999998655 7899999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeecc-CCccceeeecCCceEEEECCCch
Q 015137 93 ADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNF 171 (412)
Q Consensus 93 a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~ 171 (412)
++.|++++++|++++++|+|||..+++..|+..+++.++++++++++..++..+.. ++...+++++|+|||++|+||||
T Consensus 92 a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~ 171 (495)
T 1wnd_A 92 ADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNY 171 (495)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcc
Confidence 99999999999999999999999999755899999999999999887765544332 34456889999999999999999
Q ss_pred hHHhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHH
Q 015137 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (412)
Q Consensus 172 P~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g 251 (412)
|+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+|.+.++++.|++||+||.|+||||+.+|
T Consensus 172 P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 250 (495)
T 1wnd_A 172 PLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATG 250 (495)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHH
T ss_pred hHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999 99999999999777889999999999999999999999
Q ss_pred HHHHHHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcc
Q 015137 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (412)
Q Consensus 252 ~~i~~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~ 331 (412)
+.|++.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 251 ~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 329 (495)
T 1wnd_A 251 EHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLK 329 (495)
T ss_dssp HHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHH-hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhcc
Confidence 99999999 88999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCc-cCCCCCceEeeEEEeeCCCCCcccccCcccceeEEE
Q 015137 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGK-PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (412)
Q Consensus 332 ~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~ 409 (412)
+|+|.++++++|||+++.+++++.++|++++++| +++++||. .. ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 330 ~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 408 (495)
T 1wnd_A 330 SGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVT 408 (495)
T ss_dssp BCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEE
Confidence 9999999999999999999999999999999999 99999997 53 369999999999999999999999999999999
Q ss_pred EeC
Q 015137 410 KFK 412 (412)
Q Consensus 410 ~~~ 412 (412)
+|+
T Consensus 409 ~~~ 411 (495)
T 1wnd_A 409 PFD 411 (495)
T ss_dssp EEC
T ss_pred EeC
Confidence 996
No 20
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=4.6e-88 Score=683.41 Aligned_cols=389 Identities=38% Similarity=0.670 Sum_probs=370.5
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015137 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (412)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (412)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 8 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 85 (481)
T 3jz4_A 8 FRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEH 85 (481)
T ss_dssp CCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 345689999999987889999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeec-cCCccceeeecCCceEEEECCCchhHHhhHH
Q 015137 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (412)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (412)
+++|++++++|+|||..+++. |+..+++.+++++.+..+..+...+. ..+...+++++|+|||++|+|||||+.+.++
T Consensus 86 ~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 164 (481)
T 3jz4_A 86 QDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITR 164 (481)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHH
Confidence 999999999999999999987 99999999999999887765554442 2456678999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHH
Q 015137 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (412)
Q Consensus 179 ~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a 258 (412)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|++.++++.|++||+||.|+||||+.+|+.|++.+
T Consensus 165 ~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~a 244 (481)
T 3jz4_A 165 KAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQC 244 (481)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998788999999999999999999999999999999
Q ss_pred HhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCC
Q 015137 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (412)
Q Consensus 259 ~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~ 338 (412)
+ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 245 a-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 323 (481)
T 3jz4_A 245 A-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDN 323 (481)
T ss_dssp T-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTST
T ss_pred h-hcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccC
Confidence 9 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
++++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 324 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 397 (481)
T 3jz4_A 324 GVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFK 397 (481)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEEC
T ss_pred cCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEEC
Confidence 99999999999999999999999999999999998643568999999999999999999999999999999996
No 21
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=5e-88 Score=685.09 Aligned_cols=394 Identities=42% Similarity=0.734 Sum_probs=374.8
Q ss_pred CCCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 015137 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (412)
Q Consensus 16 ~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~ 95 (412)
|.+++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.
T Consensus 1 ~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~ 78 (490)
T 2ve5_A 1 MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDI 78 (490)
T ss_dssp -CCSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHH
T ss_pred CCccccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence 3556778999999999987888999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeeccCCccceeeecCCceEEEECCCchhHHh
Q 015137 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTM 175 (412)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (412)
|++++++|++++++|+|||..+++..|+..+++.++++++++++..+...+...+...+++++|+|||++|+|||||+.+
T Consensus 79 l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~ 158 (490)
T 2ve5_A 79 LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQI 158 (490)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHH
Confidence 99999999999999999999999855999999999999999887766555544566788999999999999999999999
Q ss_pred hHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHH
Q 015137 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (412)
Q Consensus 176 ~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (412)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||++|.|+||||+.+|+.|+
T Consensus 159 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~ 238 (490)
T 2ve5_A 159 ALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238 (490)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997778999999999999999999999999999
Q ss_pred HHH-HhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCC
Q 015137 256 QAA-ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (412)
Q Consensus 256 ~~a-~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~ 334 (412)
+.+ + ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+
T Consensus 239 ~~a~a-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 317 (490)
T 2ve5_A 239 ASASS-SSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGD 317 (490)
T ss_dssp HHHHH-HHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred Hhchh-ccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 999 7 78999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCC----CCCceEeeEEEeeCCCCCcccccCcccceeEEEE
Q 015137 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410 (412)
Q Consensus 335 p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~ 410 (412)
|.++++++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 318 p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~ 397 (490)
T 2ve5_A 318 PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 397 (490)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEE
Confidence 999999999999999999999999999999999999997631 3689999999999999999999999999999999
Q ss_pred eC
Q 015137 411 FK 412 (412)
Q Consensus 411 ~~ 412 (412)
|+
T Consensus 398 ~~ 399 (490)
T 2ve5_A 398 YD 399 (490)
T ss_dssp ES
T ss_pred eC
Confidence 95
No 22
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=5.1e-88 Score=686.92 Aligned_cols=387 Identities=43% Similarity=0.722 Sum_probs=367.9
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015137 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (412)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (412)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 26 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 103 (515)
T 2d4e_A 26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHA 103 (515)
T ss_dssp CBCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 35689999999876778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeec-cCCccceeeecCCceEEEECCCchhHHhhHHH
Q 015137 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (412)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (412)
++|++++++|+|||..+++. |+..+++.++|+++++++..+...+. ..+...+++++|+|||++|+|||||+.+.+++
T Consensus 104 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 182 (515)
T 2d4e_A 104 DELAVMECLDAGQVLRIVRA-QVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWR 182 (515)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhh
Confidence 99999999999999999985 99999999999999988876665443 23456788999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHH
Q 015137 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (412)
Q Consensus 180 ~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~ 259 (412)
+++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.++++.|++||++|.|+||||+.+|+.|++.++
T Consensus 183 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa 262 (515)
T 2d4e_A 183 IAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA 262 (515)
T ss_dssp HHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred hhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999977788999999999999999999999999999999
Q ss_pred hCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCC
Q 015137 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (412)
Q Consensus 260 ~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~ 339 (412)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++
T Consensus 263 -~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 341 (515)
T 2d4e_A 263 -DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPE 341 (515)
T ss_dssp -GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred -hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCccccc
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCC--------CCCceEeeEEEeeCCCCCcccccCcccceeEEEEe
Q 015137 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (412)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (412)
+++||++++++++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|
T Consensus 342 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~ 420 (515)
T 2d4e_A 342 TEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPF 420 (515)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEE
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEee
Confidence 9999999999999999999999999999999997642 2599999999999 999999999999999999999
Q ss_pred C
Q 015137 412 K 412 (412)
Q Consensus 412 ~ 412 (412)
+
T Consensus 421 ~ 421 (515)
T 2d4e_A 421 K 421 (515)
T ss_dssp S
T ss_pred C
Confidence 5
No 23
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=7.4e-88 Score=687.90 Aligned_cols=386 Identities=33% Similarity=0.573 Sum_probs=367.3
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015137 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (412)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (412)
..+++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||. .|+.++..+|.++|+++++.|++
T Consensus 36 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 111 (538)
T 3qan_A 36 KEYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRR 111 (538)
T ss_dssp EEECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHH
Confidence 3568999999997 668999999999 999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHh-hhhhcCeeeeccCCccceeeecCCceEEEECCCchhHHhhH
Q 015137 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA-ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (412)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (412)
++++|++++++|+|||+.+++. |+..+++.++||+++ .+...+...+...+...++.++|+|||++|+|||||+.+.+
T Consensus 112 ~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 190 (538)
T 3qan_A 112 RKHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMV 190 (538)
T ss_dssp THHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHH
Confidence 9999999999999999999997 999999999999998 55555554443345678899999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHH
Q 015137 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (412)
Q Consensus 178 ~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (412)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 191 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 270 (538)
T 3qan_A 191 GTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYER 270 (538)
T ss_dssp HHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877899999999999999999999999999999
Q ss_pred HHhCC------CCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcc
Q 015137 258 AATSN------LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (412)
Q Consensus 258 a~~~~------~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~ 331 (412)
++ .+ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 271 aa-~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 349 (538)
T 3qan_A 271 AA-VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLT 349 (538)
T ss_dssp HT-SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCC
T ss_pred hh-hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhcc
Confidence 98 77 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEe
Q 015137 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (412)
Q Consensus 332 ~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (412)
+|+|.++++++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|
T Consensus 350 vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 428 (538)
T 3qan_A 350 VGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKA 428 (538)
T ss_dssp BSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEe
Confidence 9999999999999999999999999999999999 999999875347999999999999999999999999999999998
Q ss_pred C
Q 015137 412 K 412 (412)
Q Consensus 412 ~ 412 (412)
+
T Consensus 429 ~ 429 (538)
T 3qan_A 429 N 429 (538)
T ss_dssp S
T ss_pred C
Confidence 5
No 24
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.3e-87 Score=681.92 Aligned_cols=383 Identities=33% Similarity=0.539 Sum_probs=365.1
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015137 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (412)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (412)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|+++++.|+++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 87 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEER 87 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 335789999999987788999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeecc--C----CccceeeecCCceEEEECCCchhH
Q 015137 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--R----ALQGYTLREPIGVVGHIIPWNFPT 173 (412)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (412)
+++|++++++|+|||..+++. |+..+++.++|+++++++..+...+.. + +...+++++|+|||++|+|||||+
T Consensus 88 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~ 166 (505)
T 3prl_A 88 KEIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPV 166 (505)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTT
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHH
Confidence 999999999999999999997 999999999999999887766544432 2 345788999999999999999999
Q ss_pred HhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHH
Q 015137 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (412)
Q Consensus 174 ~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (412)
.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|++||++|.|+||||+.+|+.
T Consensus 167 ~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 246 (505)
T 3prl_A 167 NLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER 246 (505)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987789999999999999999999999999
Q ss_pred HHHHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccC
Q 015137 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (412)
Q Consensus 254 i~~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g 333 (412)
|++.++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 247 i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 247 ISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 999876 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 334 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
||. +++++||++++++++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 398 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVK 398 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeC
Confidence 999 9999999999999999999999999999999999974 58999999999999999999999999999999995
No 25
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=7.4e-87 Score=676.59 Aligned_cols=398 Identities=29% Similarity=0.477 Sum_probs=371.3
Q ss_pred ccccccccCCCcc-ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHH
Q 015137 8 GSCKSLFKMPEIK-FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERR 86 (412)
Q Consensus 8 ~~~~~~~~~~~~~-~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~ 86 (412)
.....+++..+.+ .++.||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~ 84 (500)
T 2j6l_A 9 QPQYAWLKELGLREENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRG 84 (500)
T ss_dssp SGGGGGGGGGTCCSEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHH
T ss_pred cchhHHHHhcCCCCCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHH
Confidence 4555677777774 489999999994 567899999999999999999999999999999999999 89999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeecc-CCccceeeecCCceEEE
Q 015137 87 GIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGH 165 (412)
Q Consensus 87 ~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~ 165 (412)
++|+++++.|++++++|++++++|+|||..+++. |+..+++.++|++++++++.+...+.. .+...+++++|+|||++
T Consensus 85 ~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~ 163 (500)
T 2j6l_A 85 EIVRQIGDALREKIQVLGSLVSLEMGKILVEGVG-EVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGI 163 (500)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEE
Confidence 9999999999999999999999999999999976 999999999999998877665543322 23445788999999999
Q ss_pred ECCCchhHHhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHHHhCCCcCE
Q 015137 166 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241 (412)
Q Consensus 166 i~p~n~P~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~----~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~ 241 (412)
|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+| +.++++.|++|+++|.
T Consensus 164 I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~ 242 (500)
T 2j6l_A 164 ITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNL 242 (500)
T ss_dssp ECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSE
T ss_pred ECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCE
Confidence 999999999999999999999999999999999999999988876 46999999999999 7788999999999999
Q ss_pred EEeeCChHHHHHHHHHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHH
Q 015137 242 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321 (412)
Q Consensus 242 v~ftGs~~~g~~i~~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~ 321 (412)
|+||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|++
T Consensus 243 I~FTGS~~~g~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~ 321 (500)
T 2j6l_A 243 LSFTGSTQVGKQVGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVN 321 (500)
T ss_dssp EEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHH
T ss_pred EEEECCHHHHHHHHHHhc-cCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHH
Confidence 999999999999999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCc
Q 015137 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEI 401 (412)
Q Consensus 322 ~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~ 401 (412)
+|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+
T Consensus 322 ~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 401 (500)
T 2j6l_A 322 RLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTET 401 (500)
T ss_dssp HHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCC
T ss_pred HHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcc
Confidence 99999999999999999999999999999999999999999999999999986434699999999999999999999999
Q ss_pred ccceeEEEEeC
Q 015137 402 FGPVMALMKFK 412 (412)
Q Consensus 402 fgPv~~v~~~~ 412 (412)
||||++|++|+
T Consensus 402 FGPVl~v~~~~ 412 (500)
T 2j6l_A 402 FAPILYVFKFQ 412 (500)
T ss_dssp SSSEEEEEEEC
T ss_pred cCceEEEEeeC
Confidence 99999999996
No 26
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=7.2e-87 Score=675.78 Aligned_cols=387 Identities=28% Similarity=0.486 Sum_probs=366.1
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015137 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (412)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (412)
++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 81 (485)
T 4dng_A 4 ETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHE 81 (485)
T ss_dssp GGCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999887788999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeec--cCCccceeeecCCceEEEECCCchhHHhh
Q 015137 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (412)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (412)
++++|++++++|+|||+.+++. |+..+++.+++++++++...+...+. ..+...+++++|+|||++|+|||||+...
T Consensus 82 ~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 160 (485)
T 4dng_A 82 NRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLS 160 (485)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHH
Confidence 9999999999999999999997 99999999999999988766655442 23467789999999999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHH
Q 015137 177 FMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (412)
Q Consensus 177 ~~~~~~ALaaGn~vv~kps~~~~~~~-~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (412)
++++++||++||+||+|||+.+|+++ .+|.+++.++|+|+|++|+++|++.++++.|++||++|.|+||||+.+|+.|+
T Consensus 161 ~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~ 240 (485)
T 4dng_A 161 MRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIG 240 (485)
T ss_dssp HHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999998777999999999999999999999999999
Q ss_pred HHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCC
Q 015137 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (412)
Q Consensus 256 ~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p 335 (412)
+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 241 ~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~ 319 (485)
T 4dng_A 241 EIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQ 319 (485)
T ss_dssp HHHH-HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHh-hhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 9998 789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
.++++++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 320 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~ 393 (485)
T 4dng_A 320 TDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAG 393 (485)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEES
T ss_pred CcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeC
Confidence 999999999999999999999999999999999999975 58999999999999999999999999999999995
No 27
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.1e-86 Score=676.52 Aligned_cols=386 Identities=36% Similarity=0.592 Sum_probs=369.1
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015137 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (412)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (412)
++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 87 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELLEE 87 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHH
Confidence 4566899999999887888999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeec--cCCccceeeecCCceEEEECCCchhHHhh
Q 015137 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (412)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (412)
++++|++++++|+|||..+++. |+..+++.+++++.++++..+ ..+. .++...+++++|+|||++|+|||||+...
T Consensus 88 ~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 165 (508)
T 3r64_A 88 HREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLS 165 (508)
T ss_dssp THHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred hHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence 9999999999999999999997 999999999999998877655 4442 23467889999999999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHH
Q 015137 177 FMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (412)
Q Consensus 177 ~~~~~~ALaaGn~vv~kps~~~~~~~-~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (412)
++++++||++||+||+|||+.+|+++ .+|++++.++|+|+|++|+|+|++.++++.|++||++|.|+||||+.+|+.|+
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~ 245 (508)
T 3r64_A 166 IRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVG 245 (508)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999997778999999999999999999999999999
Q ss_pred HHHHhC--CCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccC
Q 015137 256 QAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (412)
Q Consensus 256 ~~a~~~--~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g 333 (412)
+.++ + +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 246 ~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 324 (508)
T 3r64_A 246 ELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTG 324 (508)
T ss_dssp HHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence 9998 7 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 334 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+|.++++++|||+++.+++++.++|++++++|+++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 325 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (508)
T 3r64_A 325 DPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400 (508)
T ss_dssp CTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEES
T ss_pred CCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeC
Confidence 99999999999999999999999999999999999999975 58999999999999999999999999999999995
No 28
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=5.4e-87 Score=675.56 Aligned_cols=384 Identities=37% Similarity=0.647 Sum_probs=365.6
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015137 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (412)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (412)
.++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++|++
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999754 7899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeec-cCCccceeeecCCceEEEECCCchhHHhhHHHH
Q 015137 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (412)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~ 180 (412)
+|++++++|+|||..+++. |+..+++.++|+++++++..+...+. ..+...+++++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 9999999999999999987 99999999999999988766655443 234567889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHH
Q 015137 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP---GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (412)
Q Consensus 181 ~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~---g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (412)
++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+ |.+.++++.|++||++|.|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 8666789999999999999999999999999999
Q ss_pred HHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhh-cccCCCC
Q 015137 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPF 336 (412)
Q Consensus 258 a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~-~~~g~p~ 336 (412)
++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.
T Consensus 248 aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HH-TTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hh-ccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 99 899999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCc-eEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY-YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~-~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
++++++|||+++.+++++.++|++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|+
T Consensus 327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 402 (487)
T 2w8n_A 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFD 402 (487)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEES
T ss_pred cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeC
Confidence 999999999999999999999999999999999999864 3689 99999999999999999999999999999995
No 29
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1.7e-86 Score=670.72 Aligned_cols=375 Identities=31% Similarity=0.551 Sum_probs=352.4
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 015137 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (412)
Q Consensus 24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (412)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|+++++.|++++++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999975 45 99999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeeccCCccceeeecCCceEEEECCCchhHHhhHHHHHHH
Q 015137 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (412)
Q Consensus 104 ~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~A 183 (412)
++++++|+|||..+++. |+..+++.++|+++++++..+...+. .+...+++++|+|||++|+|||||+.+.++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPS-DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECC-TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecC-CCceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999987 99999999999999988776555443 25678899999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHH
Q 015137 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (412)
Q Consensus 184 LaaGn~vv~kps~~~~~~~~~l~~~~~~a----GlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~ 259 (412)
|++||+||+|||+.+|+++.++++++.++ |+|+|++|+|+|++.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999987778999999999999999999999999998876
Q ss_pred hCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCC
Q 015137 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (412)
Q Consensus 260 ~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~ 339 (412)
++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+++|||+++++++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~ 380 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTN 380 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEEC
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEc
Confidence 99999999999999999999999999999999975 5899999999 999999999999999999999996
No 30
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.5e-86 Score=671.00 Aligned_cols=387 Identities=34% Similarity=0.559 Sum_probs=364.5
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015137 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (412)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (412)
..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|+++++.|+++
T Consensus 4 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 81 (486)
T 1t90_A 4 RKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQH 81 (486)
T ss_dssp CBCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHH
Confidence 346789999999876778999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeee-ccCCccceeeecCCceEEEECCCchhHHhhHH
Q 015137 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (412)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (412)
+++|++++++|+|||..+++. |+..+++.+++++.+.+...++..+ ...+...+++++|+|||++|+|||||+.+.++
T Consensus 82 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 160 (486)
T 1t90_A 82 KEELAHLITIENGKNTKEALG-EVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCW 160 (486)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHH
Confidence 999999999999999999986 9999999999998776665555433 22345668899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHH
Q 015137 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (412)
Q Consensus 179 ~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a 258 (412)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.+++..|++||++|.|+||||+.+|+.|++.+
T Consensus 161 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~a 239 (486)
T 1t90_A 161 MFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKG 239 (486)
T ss_dssp HHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 557899999999999999999999999999999
Q ss_pred HhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCce-EEEecccHHHHHHHHHHHHhhcccCCCCC
Q 015137 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR-VYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (412)
Q Consensus 259 ~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~-v~V~~~v~~~f~~~L~~~~~~~~~g~p~~ 337 (412)
+ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|.+
T Consensus 240 a-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~ 317 (486)
T 1t90_A 240 S-ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLD 317 (486)
T ss_dssp H-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTS
T ss_pred h-ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCc
Confidence 8 889999999999999999999999999999999999999999999999 999999 9999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccC-CCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+++++||++++.+++++.++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 318 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~ 393 (486)
T 1t90_A 318 DGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVK 393 (486)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred cCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeC
Confidence 99999999999999999999999999999999999743 1358999999999999999999999999999999995
No 31
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=2.8e-86 Score=669.36 Aligned_cols=381 Identities=31% Similarity=0.503 Sum_probs=361.1
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015137 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (412)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (412)
+++++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 3 ~~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 78 (475)
T 1euh_A 3 KQYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD 78 (475)
T ss_dssp CBCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHh
Confidence 5568999999997643 899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeecc-CC----ccc-eeeecCCceEEEECCCchhH
Q 015137 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RA----LQG-YTLREPIGVVGHIIPWNFPT 173 (412)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gvv~~i~p~n~P~ 173 (412)
+++|++++++|+|||+.+++. |+..+++.++|+++++++..+...+.. ++ ... +++++|+|||++|+|||||+
T Consensus 79 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 157 (475)
T 1euh_A 79 KEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 157 (475)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchH
Confidence 999999999999999999986 999999999999998887665544432 23 345 88999999999999999999
Q ss_pred HhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHH
Q 015137 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (412)
Q Consensus 174 ~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (412)
.+.++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.++++.|++||++|.|+||||+.+|+.
T Consensus 158 ~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~ 237 (475)
T 1euh_A 158 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237 (475)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHH
Confidence 99999999999999999999999999999999999999999999999999976778999999999999999999999999
Q ss_pred HHHHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccC
Q 015137 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (412)
Q Consensus 254 i~~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g 333 (412)
|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|
T Consensus 238 i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 314 (475)
T 1euh_A 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 314 (475)
T ss_dssp HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred HHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence 999876 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 334 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+|.+ ++++|||+++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 315 ~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 389 (475)
T 1euh_A 315 NPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVT 389 (475)
T ss_dssp CGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred Cccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecC
Confidence 9999 999999999999999999999999999999999975 58999999999999999999999999999999995
No 32
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=2.2e-86 Score=671.09 Aligned_cols=387 Identities=38% Similarity=0.612 Sum_probs=365.6
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015137 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (412)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (412)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 5 ~~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 82 (478)
T 3ty7_A 5 RDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYEN 82 (478)
T ss_dssp EECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3557899999999988888999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeeccCCccceeeecCCceEEEECCCchhHHhhHH
Q 015137 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (412)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (412)
++++|++++++|+|||..+++..|+..+++.++++++++++..+... ....++.++|+|||++|+|||||+...++
T Consensus 83 ~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 158 (478)
T 3ty7_A 83 RKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSL 158 (478)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHH
Confidence 99999999999999999999435999999999999998877655432 24578899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHH
Q 015137 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (412)
Q Consensus 179 ~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a 258 (412)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|++.++++.|+.||++|.|+||||+.+|+.|++.+
T Consensus 159 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~a 238 (478)
T 3ty7_A 159 KLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKA 238 (478)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CST
T ss_pred HHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998778999999999999999999999999999999
Q ss_pred HhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCC
Q 015137 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (412)
Q Consensus 259 ~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~ 338 (412)
+ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 239 a-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 317 (478)
T 3ty7_A 239 A-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPRED 317 (478)
T ss_dssp T-TTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTST
T ss_pred H-hcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCC---CCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
++++||++++++++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 318 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 394 (478)
T 3ty7_A 318 GTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYN 394 (478)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecC
Confidence 99999999999999999999999999999999994321 369999999999999999999999999999999995
No 33
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=4.3e-86 Score=673.40 Aligned_cols=385 Identities=32% Similarity=0.555 Sum_probs=362.0
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCC-CCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015137 21 FTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (412)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (412)
.+++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 37 ~~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (516)
T 1uzb_A 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRR 112 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 4678999999963 5789999999 6999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeee--ccCCccceeeecCCceEEEECCCchhHHhhH
Q 015137 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (412)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (412)
+++|++++++|+|||+.+++. |+..+++.++||++++++..+...+ ..++...+++++|+|||++|+|||||+.+.+
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 191 (516)
T 1uzb_A 113 KRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHH
Confidence 999999999999999999986 9999999999999988877654422 2234566889999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHH
Q 015137 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (412)
Q Consensus 178 ~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (412)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 192 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~ 271 (516)
T 1uzb_A 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999998
Q ss_pred HHh-----CCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhccc
Q 015137 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (412)
Q Consensus 258 a~~-----~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~ 332 (412)
++. ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 272 aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 351 (516)
T 1uzb_A 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred hhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence 862 568999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 333 g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
|+| ++++++|||+++.+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 352 G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 429 (516)
T 1uzb_A 352 GPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp SCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeC
Confidence 999 99999999999999999999999999999 9999997632469999999999999999999999999999999995
No 34
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=5.7e-86 Score=666.49 Aligned_cols=370 Identities=26% Similarity=0.436 Sum_probs=355.2
Q ss_pred eEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhh
Q 015137 38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW 117 (412)
Q Consensus 38 ~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 117 (412)
+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||+.+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 489999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred hhcCcHHHHHHHHHHHHHhhhhhcCeeeeccCCccceeeecCCceEEEECCCchhHHhhHHHHHHHhhcCCEEEEecCCC
Q 015137 118 AKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197 (412)
Q Consensus 118 a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGn~vv~kps~~ 197 (412)
++. |+..+++.++|+++++++..+...+...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus 83 a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SKE-EVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 996 9999999999999998877665544445567889999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHHhCCCCceeeecCCCCCeE
Q 015137 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (412)
Q Consensus 198 ~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~v~~elgG~~~~i 277 (412)
+|+++.+|++++.++|+|+|++|+|+|++.++++ |+.||+||.|+||||+.+|+.|++.++ ++++|+++|||||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAG-KNLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHh-ccCCceEeecCCCCcce
Confidence 9999999999999999999999999998777788 999999999999999999999999999 89999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCCCCccccCCHHHHHHHHHH
Q 015137 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (412)
Q Consensus 278 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 357 (412)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 374 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVE 374 (484)
T ss_dssp HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEES
T ss_pred HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcC
Confidence 9999999999999998644579999999999999999999999999999999995
No 35
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=7.6e-86 Score=668.80 Aligned_cols=382 Identities=29% Similarity=0.465 Sum_probs=361.4
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015137 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (412)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (412)
+.+++||||+|+.+. ++++++||+||+++++++.++.+|+++|+++|++||+. .|+.++..+|.++|+++++.|+++
T Consensus 17 ~~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~ 93 (501)
T 1uxt_A 17 PVYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERN 93 (501)
T ss_dssp EEECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHh
Confidence 356789999999763 78999999999999999999999999999999999951 399999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeecc--C---CccceeeecCCceEEEECCCchhHH
Q 015137 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--R---ALQGYTLREPIGVVGHIIPWNFPTT 174 (412)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~P~Gvv~~i~p~n~P~~ 174 (412)
+++|++++++|+|||..+++. |+..+++.++||++++++..+...+.. . +...+++++|+|||++|+|||||+.
T Consensus 94 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 172 (501)
T 1uxt_A 94 LDVFAEVLVMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLF 172 (501)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHH
Confidence 999999999999999999986 999999999999999888766654432 2 2357899999999999999999999
Q ss_pred hhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHH
Q 015137 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (412)
Q Consensus 175 ~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (412)
+.++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++ ++++.|++|+++|.|+||||+.+|+.|
T Consensus 173 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i 251 (501)
T 1uxt_A 173 DAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERV 251 (501)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999977 889999999999999999999999999
Q ss_pred HHHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCC
Q 015137 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (412)
Q Consensus 255 ~~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~ 334 (412)
++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||
T Consensus 252 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 328 (501)
T 1uxt_A 252 VKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGD 328 (501)
T ss_dssp HHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSC
T ss_pred HHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCC
Confidence 99876 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCC-ceEeeEEEeeCC---CCCcccccCcccceeEEEE
Q 015137 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG-YYIEPTIFTNVT---EDMLIAKNEIFGPVMALMK 410 (412)
Q Consensus 335 p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~i~~~E~fgPv~~v~~ 410 (412)
|.++++++|||+++.+++++.++|++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++
T Consensus 329 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~ 405 (501)
T 1uxt_A 329 PRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVE 405 (501)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEE
T ss_pred ccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEe
Confidence 9999999999999999999999999999999999999975 57 999999999999 9999999999999999999
Q ss_pred eC
Q 015137 411 FK 412 (412)
Q Consensus 411 ~~ 412 (412)
|+
T Consensus 406 ~~ 407 (501)
T 1uxt_A 406 VK 407 (501)
T ss_dssp ES
T ss_pred eC
Confidence 95
No 36
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.9e-85 Score=663.92 Aligned_cols=383 Identities=27% Similarity=0.408 Sum_probs=362.8
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 015137 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (412)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (412)
++||||+|+.+. +.++.++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999864 56899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeeccCCccceeeecCCceEEEECCCchhHHhhHHHHHH
Q 015137 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (412)
Q Consensus 103 l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ 182 (412)
|++++++|+|||..+++. |+..+++.++|++.+.+...+...+...+...+++++|+|||++|+|||||+.+.++++++
T Consensus 84 la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWESAT-EVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 999999999999999986 9999999999999888776655443333445677899999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHHhCC
Q 015137 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (412)
Q Consensus 183 ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~ 262 (412)
||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++| +.+.++.|+.||++|.|+||||+.+|+.|++.++ .+
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa-~~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFG-GQ 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTT-TC
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh-cc
Confidence 999999999999999999999999999999999999999999 6688999999999999999999999999999998 88
Q ss_pred CCce-eeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEeccc-HHHHHHHHHHHHhhcccCC-CCCCC
Q 015137 263 LKPV-SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGD-PFDPA 339 (412)
Q Consensus 263 ~~~v-~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v-~~~f~~~L~~~~~~~~~g~-p~~~~ 339 (412)
++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|+++++++++|+ |.+++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 9998 7999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+++|||+++++++++.++|++++++|+++++||.....+|+|++|||+. ++++|++++||+||||++|++|+
T Consensus 321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~ 392 (490)
T 3ju8_A 321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYS 392 (490)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEES
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeC
Confidence 9999999999999999999999999999999997654579999999998 99999999999999999999995
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=6.7e-85 Score=667.44 Aligned_cols=387 Identities=26% Similarity=0.393 Sum_probs=360.7
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015137 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (412)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (412)
..+++||||+|+.+. ..+.++||.| |+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++
T Consensus 62 ~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 457899999999753 4678899998 799999999999999999999999999 89999999999999999999999
Q ss_pred h-HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeee-ccCCccceeeecCCceEEEECCCchhHHhh
Q 015137 99 H-AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (412)
Q Consensus 99 ~-~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (412)
+ +++|+.++++|+|||+.+++..++..+++.+++++.+++++.+.... ...+...+.++.|+|||++|+|||||+...
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 9 99999999999999999998633999999999999998877653321 112334566778889999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHH
Q 015137 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (412)
Q Consensus 177 ~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (412)
.++++||| +||+||+|||+.+|+++.+|+++|.++|+|+|+||+|+|++.++++.|++||+|+.|+||||+.+|+.|++
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~ 296 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWR 296 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHhCCCCc------eeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhc
Q 015137 257 AAATSNLKP------VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 330 (412)
Q Consensus 257 ~a~~~~~~~------v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~ 330 (412)
.++ ++++| +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 297 ~aa-~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l 375 (563)
T 4e3x_A 297 QVA-QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375 (563)
T ss_dssp HHH-HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHH-hhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhc
Confidence 999 77774 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCCccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEE
Q 015137 331 VVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 408 (412)
Q Consensus 331 ~~g~p-~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v 408 (412)
++|+| .|+++++||++++.+++++.++|+++++ +|+++++||..+...|+|++|||+.+++++|++++||+||||++|
T Consensus 376 ~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V 455 (563)
T 4e3x_A 376 KVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTV 455 (563)
T ss_dssp CBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEE
T ss_pred cCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEE
Confidence 99999 9999999999999999999999999996 899999999876557999999999999999999999999999999
Q ss_pred EEeC
Q 015137 409 MKFK 412 (412)
Q Consensus 409 ~~~~ 412 (412)
++|+
T Consensus 456 ~~~~ 459 (563)
T 4e3x_A 456 YVYP 459 (563)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9985
No 38
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=3.4e-83 Score=645.55 Aligned_cols=373 Identities=28% Similarity=0.453 Sum_probs=354.4
Q ss_pred CCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc
Q 015137 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL 114 (412)
Q Consensus 35 ~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 114 (412)
+..+++++||+||+++++++.++.+++++++++|++||. .|+.++..+|.++|+++++.|++++++|++++++|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 346789999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred hhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeeccCCccceeeecCCceEEEECCCchhHHhhHHHHHHHhhcCCEEEEec
Q 015137 115 HSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194 (412)
Q Consensus 115 ~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGn~vv~kp 194 (412)
..+++. |+..+++.++++++++++..+.......+...+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 83 ~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 999986 9999999999999988776554422224556788999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHHhCCCCceeeecCCCC
Q 015137 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274 (412)
Q Consensus 195 s~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~v~~elgG~~ 274 (412)
|+.+|+++.++.+++.++|+|+|++|+++| +.+.+..|++||+++.|+||||+.+|+.|++.++ ++++|+++|+||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHh-ccCCceEEEcCCCC
Confidence 999999999999999999999999999999 4577899999999999999999999999999999 88999999999999
Q ss_pred CeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCCCCccccCCHHHHHHH
Q 015137 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354 (412)
Q Consensus 275 ~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 354 (412)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 355 LSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 355 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~ 377 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAK 377 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcC
Confidence 9999999999999999998654679999999999999999999999999999999985
No 39
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=2.8e-82 Score=681.34 Aligned_cols=387 Identities=34% Similarity=0.524 Sum_probs=366.3
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015137 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (412)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (412)
..+++||||+|+. ++.+++++||+| ++++++++.++.+++++|+++|++||. .|+.+|..+|.++|++++++|++
T Consensus 530 ~~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~ 605 (1026)
T 4f9i_A 530 KTYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARK 605 (1026)
T ss_dssp EEECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 4578999999996 457899999998 999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCeeeec-cCCccceeeecCCceEEEECCCchhHHhhH
Q 015137 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (412)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (412)
++++|++++++|+|||..+++. |+..+++.++||+.+++++.+..... .++...++.++|+|||++|+|||||+.+.+
T Consensus 606 ~~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 606 RLFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp THHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHH
Confidence 9999999999999999999987 99999999999999988776544332 345667889999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHH
Q 015137 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (412)
Q Consensus 178 ~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (412)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|++||+|+.|+||||+.+|+.|++.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~ 764 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIER 764 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHh-----CCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhccc
Q 015137 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (412)
Q Consensus 258 a~~-----~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~ 332 (412)
++. ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++
T Consensus 765 aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 765 AAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred hhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 872 368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 333 g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
|+|.++++++||+|++.+++++.++|++++++| ++++||..+...|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 845 G~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 923 (1026)
T 4f9i_A 845 GPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923 (1026)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999997654459999999999999999999999999999999985
No 40
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=3.7e-82 Score=647.51 Aligned_cols=383 Identities=24% Similarity=0.366 Sum_probs=348.2
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhh-cccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015137 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEH 99 (412)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (412)
.+++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+ .|+.++..+|.++|+++++.|++|
T Consensus 7 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (534)
T 2y53_A 7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAK 82 (534)
T ss_dssp ECCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHh
Confidence 467899999997644 579999999999999999988 9999999999999 58 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcC-------eeeecc-CC-ccceeeecCC-ceEEEECCC
Q 015137 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-------EVLKMS-RA-LQGYTLREPI-GVVGHIIPW 169 (412)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~~~-------~~~~~~-~~-~~~~~~~~P~-Gvv~~i~p~ 169 (412)
+++|++++++|+|||+.+++. |+..+++.+++|+.+++++.+ +..+.. .+ ...+..++|+ |||++|+||
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~Pw 161 (534)
T 2y53_A 83 RGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAF 161 (534)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCT
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCC
Confidence 999999999999999999986 999999999999988766533 111211 11 2357789997 999999999
Q ss_pred chhHHhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCCh
Q 015137 170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 248 (412)
Q Consensus 170 n~P~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aG-lP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~ 248 (412)
|||+.+.++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.+++..| +++|.|+||||+
T Consensus 162 N~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~ 238 (534)
T 2y53_A 162 NFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSA 238 (534)
T ss_dssp TCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCH
T ss_pred chHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 89999999999654433333 579999999999
Q ss_pred HHHHHHHHHHH-hCCCCceeeecCCCCCeEEcCCC-----CHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHH
Q 015137 249 DVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322 (412)
Q Consensus 249 ~~g~~i~~~a~-~~~~~~v~~elgG~~~~iV~~da-----dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~ 322 (412)
.+|+.|++.++ .+++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 99999998763 37899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCC------CCCceEeeEEEeeCCCC--C
Q 015137 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------KKGYYIEPTIFTNVTED--M 394 (412)
Q Consensus 323 L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~------~~g~~~~Ptvl~~~~~~--~ 394 (412)
|+++++++++|+|.++++++|||+++.+++++.++|+++ .+|+++++||.... ..|+|++|||+.+++++ |
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 999999999999999999999999999999999999999 68999999997421 35899999999999987 6
Q ss_pred cccccCcccceeEEEEeC
Q 015137 395 LIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 395 ~i~~~E~fgPv~~v~~~~ 412 (412)
++++||+||||++|++|+
T Consensus 398 ~i~~eEiFGPVl~v~~~~ 415 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYR 415 (534)
T ss_dssp STTTCCCSSSEEEEEEEC
T ss_pred HHHhCCCcCCEEEEEEEC
Confidence 999999999999999996
No 41
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=8.2e-82 Score=636.58 Aligned_cols=371 Identities=30% Similarity=0.462 Sum_probs=346.6
Q ss_pred CCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Q 015137 34 VSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGK 113 (412)
Q Consensus 34 ~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 113 (412)
.++++++++||+||+++++++.++.+|+++|+++|++||+ .|++++..+|.++|+++++.|++|+++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred chhhhhcCcHHHHHHHHHHHHHhhhhhcCeee-ec-cCCccceeeecCCceEEEECCCchhHHhhHHHHHHHhhcCCEEE
Q 015137 114 LHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191 (412)
Q Consensus 114 ~~~~a~~~ev~~~i~~l~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGn~vv 191 (412)
+... .. |+..++..+++++..+.+...... .. .++...+..++|+|||++|+|||||+++.++++++||++||+||
T Consensus 81 ~~~~-~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT-VL-EIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH-HH-HHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH-HH-HHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 8654 44 899999999999988766543322 22 23455667889999999999999999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHHhCCCCceeeecC
Q 015137 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271 (412)
Q Consensus 192 ~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~v~~elg 271 (412)
+|||+.+|+++..+.+++.++|+|+|++++++| +.+.+..|+.| +|.|+||||+.+|+.|++.++ ++++|+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa-~~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAA-RRFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHH-HHTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhh-cccccccccCC
Confidence 999999999999999999999999999999999 55788889866 999999999999999999999 88999999999
Q ss_pred CCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCCCCccccCCHHHH
Q 015137 272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 351 (412)
Q Consensus 272 G~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~ 351 (412)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|+|.++++++||++++.++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEeCCccCC-CCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 352 DRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 352 ~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~ 376 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFP 376 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred HHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEEC
Confidence 9999999999999999999997642 468999999999999999999999999999999995
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=5.8e-78 Score=605.85 Aligned_cols=361 Identities=24% Similarity=0.399 Sum_probs=321.2
Q ss_pred CeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh
Q 015137 37 KTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS 116 (412)
Q Consensus 37 ~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 116 (412)
..+++.||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|++++++|++++++|+|||..
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 5688999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhcCcHHHHHHHHHHHHHhhhhhcCe-eeec---cCCccceeeecCCceEEEECCCchhHHhhHHHHHHHhhcCCEEEE
Q 015137 117 WAKMGDIPGAANTLRYYAGAADKIHGE-VLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192 (412)
Q Consensus 117 ~a~~~ev~~~i~~l~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGn~vv~ 192 (412)
+++..|+..+++.++++++.+++.... .... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 998449999999999999887765432 2221 134567899999999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHHhCCCCceeeecCC
Q 015137 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272 (412)
Q Consensus 193 kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~v~~elgG 272 (412)
|||+.+|+++.++++++.++ +|+|++|+|+| +.+.+..|++ +++|.|+||||+.+|+.|++.++ ++++|+++|+||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa-~~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHh-hccCceEEECCC
Confidence 99999999999999999999 99999999999 6678999988 68999999999999999999999 899999999999
Q ss_pred CCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCCCCccccCCHHHHH
Q 015137 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFD 352 (412)
Q Consensus 273 ~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~ 352 (412)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.++ ++|||+++++++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~ 314 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQ 314 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 6665 999999999999
Q ss_pred HHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 353 RILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 353 ~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
++.++|+++. +++++||... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 315 rv~~~i~~a~---~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 370 (457)
T 3lns_A 315 RLVSLLEATQ---GQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFD 370 (457)
T ss_dssp HHHHHHHHCC---SEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEES
T ss_pred HHHHHHHhcC---CeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeC
Confidence 9999999863 5999999764 369999999999999999999999999999999995
No 43
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.1e-78 Score=617.64 Aligned_cols=373 Identities=24% Similarity=0.308 Sum_probs=339.3
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEE-EEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015137 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (412)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~-~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (412)
+...++||||+|+.+.+ ++||+||++++ +++.++.+|+++|+++|++||. .|+.++..+|.++|+++++.|+
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIE 99 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence 35578999999997532 99999999998 9999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhh--cCeeee----c---cCCccceeeecCCceEEEECC
Q 015137 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI--HGEVLK----M---SRALQGYTLREPIGVVGHIIP 168 (412)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~~~~~~--~~~~~~----~---~~~~~~~~~~~P~Gvv~~i~p 168 (412)
+++++|++++++|+|||+.+++. |+..+++.++||++++++. .+.... . ..+...+++++|+|||++|+|
T Consensus 100 ~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 178 (528)
T 3v4c_A 100 ARAEAITEIGSQETGLPEARLNG-ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence 99999999999999999999986 9999999999999988762 222221 0 023446789999999999999
Q ss_pred CchhHHhhH--HHHHHHhhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEE
Q 015137 169 WNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 242 (412)
Q Consensus 169 ~n~P~~~~~--~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~----~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v 242 (412)
||||+.+.+ +++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.+.++++.|++||+||.|
T Consensus 179 wN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V 258 (528)
T 3v4c_A 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258 (528)
T ss_dssp SSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEE
T ss_pred CcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 999999865 89999999999999999999999999999875 468999999999999887899999999999999
Q ss_pred EeeCChHHHHHHHHHHHhCCC--CceeeecCCCCCeEEcCCC---CHHHHHHHHHHHhhccCCCccccCceEEEecc-cH
Q 015137 243 SFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDV---DVNTAADMALLGILFNKGEICVASSRVYVQEG-IY 316 (412)
Q Consensus 243 ~ftGs~~~g~~i~~~a~~~~~--~~v~~elgG~~~~iV~~da---dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-v~ 316 (412)
+||||+.+|+.|++.++ +++ +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ ++
T Consensus 259 ~fTGS~~~G~~i~~~aa-~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~ 337 (528)
T 3v4c_A 259 GFTGSLAGGRALFDLCA-ARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA 337 (528)
T ss_dssp EEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH
T ss_pred EEECChHHHHHHHHHHh-hccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH
Confidence 99999999999999999 788 9999999999999999999 88899999999999999999999999999997 99
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCC---
Q 015137 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTED--- 393 (412)
Q Consensus 317 ~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~--- 393 (412)
|+|+++|++++++++.| +.+||++++.+.+++.++++ ++|+++++||.. .|+|++|||+.+++++
T Consensus 338 d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 338 DRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCccccc
Confidence 99999999999998643 67899998888777777653 479999999974 6999999999988887
Q ss_pred CcccccCcccceeEEEEeC
Q 015137 394 MLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 394 ~~i~~~E~fgPv~~v~~~~ 412 (412)
|++++||+||||++|++|+
T Consensus 406 ~~i~~eEiFGPVl~V~~~~ 424 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVG 424 (528)
T ss_dssp CGGGGCCCSSSEEEEEEES
T ss_pred ChhhcccccCCeEEEEecC
Confidence 8999999999999999995
No 44
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1e-76 Score=604.01 Aligned_cols=362 Identities=21% Similarity=0.288 Sum_probs=331.9
Q ss_pred CCCCCeEEeecCCCCceE-EEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 015137 33 SVSGKTFETIDPRTGEAI-ARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA 111 (412)
Q Consensus 33 ~~~~~~~~v~~P~tg~~i-~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 111 (412)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 446678999999999999 79999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCchhhhhcCcHHHHHHHHHHHHHhhhh--hcCeeeec----c-C-C-ccceeeecCCceEEEECCCchhHHhh--HHHH
Q 015137 112 GKLHSWAKMGDIPGAANTLRYYAGAADK--IHGEVLKM----S-R-A-LQGYTLREPIGVVGHIIPWNFPTTMF--FMKV 180 (412)
Q Consensus 112 Gk~~~~a~~~ev~~~i~~l~~~~~~~~~--~~~~~~~~----~-~-~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~~ 180 (412)
|||..+++. |+..+++.++||++++++ ..+..+.. . + + ...+++++|+|||++|+|||||+... .+++
T Consensus 81 Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 999999986 999999999999988875 33333211 0 1 1 13578999999999999999999985 4999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHH
Q 015137 181 SPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (412)
Q Consensus 181 ~~ALaaGn~vv~kps~~~~~~~~~l~~~~----~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (412)
++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.+.++++.|++||+||.|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999998 56799999999999977788999999999999999999999999999
Q ss_pred HHHhCCC--CceeeecCCCCCeEEcCCCCHH--HHHHHHHHHhhccCCCccccCceEEEecc-cHHHHHHHHHHHHhhcc
Q 015137 257 AAATSNL--KPVSLELGGKSPLLIFDDVDVN--TAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWV 331 (412)
Q Consensus 257 ~a~~~~~--~~v~~elgG~~~~iV~~dadl~--~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-v~~~f~~~L~~~~~~~~ 331 (412)
.++ +++ +|+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ ++|+|+++|++++++++
T Consensus 240 ~aa-~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhh-ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 998 675 9999999999999999999999 99999999999999999999999999999 99999999999999986
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCccCCCCCceEeeEEEeeCCCC---CcccccCcccceeE
Q 015137 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTED---MLIAKNEIFGPVMA 407 (412)
Q Consensus 332 ~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~---~~i~~~E~fgPv~~ 407 (412)
+ ||++++.+.+++.++|+++++ +|+++++||. +|+|++|||+.+++++ |++++||+||||++
T Consensus 319 ~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~ 384 (510)
T 1ez0_A 319 P----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384 (510)
T ss_dssp C----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred C----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence 3 688899999999999999994 8999999997 2899999999988887 99999999999999
Q ss_pred EEEeC
Q 015137 408 LMKFK 412 (412)
Q Consensus 408 v~~~~ 412 (412)
|++|+
T Consensus 385 v~~~~ 389 (510)
T 1ez0_A 385 IVVCE 389 (510)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 99995
No 45
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=6e-76 Score=591.74 Aligned_cols=344 Identities=27% Similarity=0.408 Sum_probs=314.7
Q ss_pred CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHH
Q 015137 56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135 (412)
Q Consensus 56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~~~ 135 (412)
.+.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||..+++..|+..++..++++++
T Consensus 15 ~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp ---CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 356799999999999999 999999999999999999999999999999999999999999975599999999888876
Q ss_pred hhhhhcCee-e---eccCCccceeeecCCceEEEECCCchhHHhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHH
Q 015137 136 AADKIHGEV-L---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 211 (412)
Q Consensus 136 ~~~~~~~~~-~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~ 211 (412)
......... . ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 172 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ 172 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 654332211 1 112234678899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHH
Q 015137 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 291 (412)
Q Consensus 212 aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i 291 (412)
+ +|+|++|+++|++ +.+..|+.| ++|.|+||||+.+|+.|++.++ ++++|+++|||||||+||++|||++.|++.+
T Consensus 173 a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 Y-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp H-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred h-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHh-hccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 8 9999999999954 456677777 8999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeC
Q 015137 292 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371 (412)
Q Consensus 292 ~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~g 371 (412)
++++|.|+||.|++++|||||++++|+|+++|+++++++ .|+|.++++++|||+++++++++.++| +|+++++|
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G 322 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG 322 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence 999999999999999999999999999999999999998 599999999999999999999999998 69999999
Q ss_pred CccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 372 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 372 g~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
|..+ ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 323 G~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 362 (469)
T 3sza_A 323 GTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVR 362 (469)
T ss_dssp CCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECS
T ss_pred CccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecC
Confidence 9864 469999999999999999999999999999999985
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=7.3e-74 Score=614.85 Aligned_cols=351 Identities=31% Similarity=0.472 Sum_probs=331.3
Q ss_pred EeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHH
Q 015137 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132 (412)
Q Consensus 53 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~~ 132 (412)
++.++.+|+++|+++|++||. .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++.. |+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHH
Confidence 788999999999999999999 899999999999999999999999999999999999999999987 99999999999
Q ss_pred HHHhhhhhcCee--eeccCCccceeeecCCceEEEECCCchhHHhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHH
Q 015137 133 YAGAADKIHGEV--LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (412)
Q Consensus 133 ~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~ 210 (412)
|+.++++..+.. .+...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999988765543 233345678899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHHhC--CCCceeeecCCCCCeEEcCCCCHHHHH
Q 015137 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAA 288 (412)
Q Consensus 211 ~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~--~~~~v~~elgG~~~~iV~~dadl~~a~ 288 (412)
++|+|+|++|+|+|++.. +..|+.||+|+.|+||||+.+|+.|++.++.. +++|+++|+|||||+||++|||++.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998766 99999999999999999999999999998832 489999999999999999999999999
Q ss_pred HHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEE
Q 015137 289 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 368 (412)
Q Consensus 289 ~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v 368 (412)
+.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988 88
Q ss_pred EeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 369 LTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 369 ~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+||..+ ..|+|+.|||+.+ +++++++||+||||++|++|+
T Consensus 859 -~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~ 898 (1001)
T 3haz_A 859 -HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYR 898 (1001)
T ss_dssp -EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEEC
T ss_pred -eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeC
Confidence 888764 4699999999974 688999999999999999985
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=2.2e-66 Score=522.66 Aligned_cols=336 Identities=20% Similarity=0.238 Sum_probs=293.6
Q ss_pred EEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHH
Q 015137 52 RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR 131 (412)
Q Consensus 52 ~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l~ 131 (412)
+++.++.+++++++++|++||+ .|+.++..+|.++|+++++.|.+++++|++++++|+||+..+++..+...+++.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 3455678999999999999999 89999999999999999999999999999999999999998875423444444443
Q ss_pred HHHHhhhhhcCeeeeccCCccceeeecCCceEEEECCCchhHHhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHH----
Q 015137 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH---- 207 (412)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~---- 207 (412)
++.+..+. .+ ......+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++
T Consensus 83 ~~~~~~~~-~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDMKT-IG-MLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTCCC-SE-EEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhcccc-cc-eeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 33332211 11 2222345677889999999999999999999999999999999999999999999999998654
Q ss_pred HHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHHhCCCCceeeecC-CCCCeEEcCCCCHHH
Q 015137 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG-GKSPLLIFDDVDVNT 286 (412)
Q Consensus 208 ~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~v~~elg-G~~~~iV~~dadl~~ 286 (412)
++.++|+|+|++|+|+|.+.+.++.|++||+||.|+||||+.+ ++.++ +++||+ +|+| ||+|+||++|||++.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~-~~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAY-SSGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHT-TSSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHH-hcCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 5688999999999999987789999999999999999999984 55556 788999 7888 999999999999999
Q ss_pred HHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHH-------hhcccCCCC-CCCCCccccCCHHHHHHHHHHH
Q 015137 287 AADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA-------KAWVVGDPF-DPAVRQGPQVDKKQFDRILSYI 358 (412)
Q Consensus 287 a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~-------~~~~~g~p~-~~~~~~gpl~~~~~~~~~~~~i 358 (412)
|++.+++++|+|+||.|++++|||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.+++
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~ 314 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLA 314 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999985 567889887 6789999999999999999999
Q ss_pred HHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 359 EHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 359 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+.++.+|+++++||.. ++++++++. +|+||||++|++|+
T Consensus 315 ~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~ 353 (464)
T 3k9d_A 315 GLTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAE 353 (464)
T ss_dssp TCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEES
T ss_pred hhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeC
Confidence 9999999999999863 567888875 89999999999985
No 48
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2e-66 Score=521.26 Aligned_cols=333 Identities=20% Similarity=0.269 Sum_probs=287.1
Q ss_pred EeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHH-H
Q 015137 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL-R 131 (412)
Q Consensus 53 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~i~~l-~ 131 (412)
++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..+++..|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 357889999999999999999 8999999999999999999999999999999999999999998754666666666 3
Q ss_pred HHHHhhhhhcCeeeeccCCccceeeecCCceEEEECCCchhHHhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHH-
Q 015137 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK- 210 (412)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~- 210 (412)
++... +..+ .++...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 79 ~~~~~--~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKDE--QTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTTC--CCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhc--cccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 33321 1111 2222234557889999999999999999999999999999999999999999999999998888875
Q ss_pred ---HcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHHhCCCCceeeecCCCCCeEEcCCCCHHHH
Q 015137 211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 287 (412)
Q Consensus 211 ---~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a 287 (412)
++|+|+|++|+|+|.+.+.++.|++||+++.|+||||+.+++ .++ +++||+++|+|||+|+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~-~~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAY-SSGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHH-TSSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHH-hcCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 789999999999998778999999999999999999998644 455 788999999999999999999999999
Q ss_pred HHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCE
Q 015137 288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367 (412)
Q Consensus 288 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~ 367 (412)
++.+++++|+|+||.|++++|||||+++||+|+++|+++ +||++++++++++.++|+++...|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999875 39999999999999999877667877
Q ss_pred EEeCCccC---CCCCceEeeEE-------EeeCCCCCcccccCcccceeEEEEeC
Q 015137 368 LLTGGKPI---GKKGYYIEPTI-------FTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 368 v~~gg~~~---~~~g~~~~Ptv-------l~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+ +||... ...|+|++||+ +.++++++++++ |+||||++|++|+
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~ 348 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRAD 348 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEES
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeC
Confidence 6 476542 12589999997 668899999876 8999999999985
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.3e-66 Score=517.18 Aligned_cols=320 Identities=16% Similarity=0.146 Sum_probs=256.4
Q ss_pred EeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-------C
Q 015137 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA-------G 112 (412)
Q Consensus 40 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------G 112 (412)
.++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+ |
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G 87 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA 87 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence 5889999999999999999999999999999999 899999999999999999999999999999999999 7
Q ss_pred Cchh----hhhcCcHHHHHHHHHHHHHhhhhhcCeeeecc---CCccceeeecCCceEEEECCCchhHHhhHHHHHHHhh
Q 015137 113 KLHS----WAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185 (412)
Q Consensus 113 k~~~----~a~~~ev~~~i~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALa 185 (412)
||+. ++.. |+..+++.++++++++++..+...+.. .+...++.++|+|||++|+||| |.+.+ +++++||+
T Consensus 88 k~~~~rl~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 88 APLLKRLSLSTS-KLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHHTTCCCHH-HHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred CchhhhhhhhHH-HHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 9997 4664 999999999999988877666543321 3445688999999999999776 76666 79999999
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHHhC
Q 015137 186 AGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (412)
Q Consensus 186 aGn~vv~kps~~~~~~~~~l~~~~~~a----GlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 261 (412)
+||+||+|||+.+|+++.+|++++.++ | |+|++|+|+| +.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999999 9 9999999999 6678999999999999999999999999999876
Q ss_pred CCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCCCC
Q 015137 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341 (412)
Q Consensus 262 ~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~ 341 (412)
++|+++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||++++|
T Consensus 241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------ 294 (463)
T 2h5g_A 241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------ 294 (463)
T ss_dssp -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT------------------------
T ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc------------------------
Confidence 899999999999999999999999999999999999 999999999999999998
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
||+ + .+++++++++|++++.|+... ..|+|+ +++|++++||+||||++|++|+
T Consensus 295 -~p~-----~---~~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~ 347 (463)
T 2h5g_A 295 -TPL-----F---DQIIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVD 347 (463)
T ss_dssp -SHH-----H---HHHHHHHHHTTCEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEES
T ss_pred -hHH-----H---HHHHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeC
Confidence 343 2 345888889999998555422 235543 5789999999999999999985
No 50
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=4.6e-64 Score=504.77 Aligned_cols=313 Identities=16% Similarity=0.149 Sum_probs=261.8
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch----hhhhcCcHHH-HHHHHHHH
Q 015137 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKMGDIPG-AANTLRYY 133 (412)
Q Consensus 59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ev~~-~i~~l~~~ 133 (412)
..+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||. .++...|+.. ++..++++
T Consensus 14 ~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~ 91 (468)
T 1vlu_A 14 SSSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVM 91 (468)
T ss_dssp CHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHH
T ss_pred hhHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHH
Confidence 368899999999999 8999999999999999999999999999999999999998 7775237887 88888888
Q ss_pred HHhhhhhc------Ceeeecc---CCccceeeecCCceEEEECCCchhHHhhHHHHHHHhhcCCEEEEecCCCChHHHHH
Q 015137 134 AGAADKIH------GEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204 (412)
Q Consensus 134 ~~~~~~~~------~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~ 204 (412)
+++++... +...+.. .+...+++++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++.+
T Consensus 92 a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 169 (468)
T 1vlu_A 92 LQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFRE 169 (468)
T ss_dssp HHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHH
Confidence 88776554 4433311 2445688999999999999999 9 9999999999999999999999999999999
Q ss_pred HHHHHH----H----cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHHhCCCCceeeecCCCCCe
Q 015137 205 FAHLAK----L----AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276 (412)
Q Consensus 205 l~~~~~----~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~v~~elgG~~~~ 276 (412)
+++++. + +|+|+|++|+|+ ++.++++.|..||+||.|+||||+.+|+.|++.+ ++|+++|+|||||+
T Consensus 170 l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~ 244 (468)
T 1vlu_A 170 MAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSI 244 (468)
T ss_dssp HHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEE
T ss_pred HHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccce
Confidence 999995 8 999999999999 6667899999999999999999999999999865 69999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhccc---CCCCCCCCCccccCCHHHHHH
Q 015137 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDR 353 (412)
Q Consensus 277 iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~ 353 (412)
||++|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |+|.+
T Consensus 245 iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~---------------- 306 (468)
T 1vlu_A 245 YLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL---------------- 306 (468)
T ss_dssp EECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------
T ss_pred EECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------
Confidence 999999999999999999999999 99999999999999 9999999999999987 87643
Q ss_pred HHHH-HHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 354 ILSY-IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 354 ~~~~-i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
.++ |++++ ++++||. | +.||++ ++++|++++||+||||++|++|+
T Consensus 307 -~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~ 352 (468)
T 1vlu_A 307 -KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVT 352 (468)
T ss_dssp -HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECC
T ss_pred -hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeC
Confidence 344 66665 3667775 4 789997 78999999999999999999986
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=7.7e-61 Score=479.39 Aligned_cols=305 Identities=21% Similarity=0.223 Sum_probs=255.0
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh----hhhc-------CcHHHH
Q 015137 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGA 126 (412)
Q Consensus 58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~ev~~~ 126 (412)
.+++++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+||+.. +++. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 89999999999999999999999999999999999999853 4432 278899
Q ss_pred HHHHHHHHHhhhhhcCeeeec---cCCccceeeecCCceEEEECCCchhHHhhHHHHHHHhhcCCEEEEecCCCChHHHH
Q 015137 127 ANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203 (412)
Q Consensus 127 i~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~ 203 (412)
++.+++++.+++.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999887643 333332 23456788999999999999998 8 588999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEEEeCCch-hHHHHHHhCCCcCEEEeeCChHHHHHHHHHHHhCCCCceeeecCCCCCeEE
Q 015137 204 YFAHLA----KLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (412)
Q Consensus 204 ~l~~~~----~~aGlP~g~v~~v~g~~~-~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~v~~elgG~~~~iV 278 (412)
++++++ .++|+|+|++|+|+|.+. .++..|..||+||.|+||||+.+|+.|++.+ ++|+++|||||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998554 5788888999999999999999999998764 6999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhccc---CCCCCCCCCccccCCHHHHHHHH
Q 015137 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRIL 355 (412)
Q Consensus 279 ~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~~ 355 (412)
++|||++.|++.+++++|.|+| .|++++|||||++++|+|+++|+++++++++ |+|. ..
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~ 317 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------AR 317 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HH
Confidence 9999999999999999999999 9999999999999999999999999999988 7653 13
Q ss_pred HHHHHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 356 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 356 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
++|+++. .| ++ +++++++++||+||||++|++|+
T Consensus 318 ~~i~~a~---------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~ 351 (444)
T 4ghk_A 318 AVLEAAG---------------VG------PL--VDATDEDWRTEYLAPVLAIKIVD 351 (444)
T ss_dssp HHHHHTT---------------CC------CC--EECCSGGGTCC---CEEEEEEES
T ss_pred HHHHhcc---------------cC------cc--cCCCchhhhccccCceEEEEEeC
Confidence 5565542 12 12 35689999999999999999995
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=7.3e-61 Score=477.27 Aligned_cols=303 Identities=18% Similarity=0.207 Sum_probs=265.2
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch----hhhhc-------CcHHHH
Q 015137 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKM-------GDIPGA 126 (412)
Q Consensus 58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~-------~ev~~~ 126 (412)
-+++++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+||+. .++.. .|+..+
T Consensus 13 ~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~ 90 (427)
T 1o20_A 13 MDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM 90 (427)
T ss_dssp -CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence 4689999999999999 8999999999999999999999999999999999999986 45431 289999
Q ss_pred HHHHHHHHHhhhhhcCeeeec---cCCccceeeecCCceEEEECCCchhHHhhHHHHHHHhhcCCEEEEecCCCChHHHH
Q 015137 127 ANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203 (412)
Q Consensus 127 i~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~ 203 (412)
++.+++|+++.++ .+...+. ..+...+++++|+|||++|+||| +.+.++++++||++||+||+|||+.+|+++.
T Consensus 91 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 91 IKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 9999999988765 4443332 12345688999999999999986 4688999999999999999999999999999
Q ss_pred HHHHHHH----HcCCCCCcEEEEeCC-chhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHHhCCCCceeeecCCCCCeEE
Q 015137 204 YFAHLAK----LAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (412)
Q Consensus 204 ~l~~~~~----~aGlP~g~v~~v~g~-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~v~~elgG~~~~iV 278 (412)
+|++++. ++|+|+|++|+|+|. ..+.++.|..||++|.|+||||+.+|+.|++.+ ++|+++|||||||+||
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEE
Confidence 9999998 689999999999984 456788899999999999999999999999876 4999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHHHHHHHHHhhcccCCCCCCCCCccccCCHHHHHHHHHHH
Q 015137 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 358 (412)
Q Consensus 279 ~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i 358 (412)
++|||++.|++.+++++|.|+| .|++++|||||++++|+|+++|++++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 9999999999999999999999 99999999999999999999999999988652
Q ss_pred HHHHHcCCEEEeCCccCCCCCceEeeEEEeeCCCCCcccccCcccceeEEEEeC
Q 015137 359 EHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (412)
Q Consensus 359 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (412)
+.||.+. .+ |+ ||| +++++++++||+||||++|++|+
T Consensus 298 ----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~ 334 (427)
T 1o20_A 298 ----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVK 334 (427)
T ss_dssp ----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEES
T ss_pred ----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEEC
Confidence 1233221 12 33 886 34578999999999999999996
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=92.46 E-value=7.9 Score=37.18 Aligned_cols=239 Identities=16% Similarity=0.150 Sum_probs=124.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-CCch------hhhhcCcH---------------HHHHHHHHHH
Q 015137 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA-GKLH------SWAKMGDI---------------PGAANTLRYY 133 (412)
Q Consensus 76 ~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-Gk~~------~~a~~~ev---------------~~~i~~l~~~ 133 (412)
.|+..+..+-.+..+.+.+.++++.|+-....++.. |... .-... |+ ..+.+.++.|
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~-ei~~A~~~l~~~~~~ai~~A~~~I~~f 104 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRD-VLEAAWQALPAEQAKALREAAERIRAY 104 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHH-HHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHH-HHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 355555566666677777777777666554444432 3211 11111 22 2333344433
Q ss_pred HHhhhhhcCeeeeccCCccceeeecCCceEEEECCCc---hhHHhhHHHHHHHhhcCCE-EE-EecCCCChHHHHHHHHH
Q 015137 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCT-MI-VKPAEQTPLIALYFAHL 208 (412)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~ALaaGn~-vv-~kps~~~~~~~~~l~~~ 208 (412)
..... .........++.....++.|+--|++..|.- ||- +.+...+||-.||+. +| .-|++. -.....+.-+
T Consensus 105 h~~Q~-~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~A 181 (423)
T 4gic_A 105 AERQK-LDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPR-GELNALVLAA 181 (423)
T ss_dssp HHHHC-CCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGG-GCCCHHHHHH
T ss_pred HHhcc-cCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCC-CCccHHHHHH
Confidence 32111 1111222345666778899999999999943 554 345568899999986 33 344432 1122233333
Q ss_pred HHHcCCCCCcEEEEeCCchhHHHHHHh----CCCcCEEEeeCChHHHHHHHHHHHhCCCCceeeecCCCCCeE-EcCCCC
Q 015137 209 AKLAGVPDGVLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL-IFDDVD 283 (412)
Q Consensus 209 ~~~aGlP~g~v~~v~g~~~~~~~~l~~----~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~v~~elgG~~~~i-V~~dad 283 (412)
...+|.. .+..-.|.+.-.+|.- -|.||.|+=.|..-+... ++.- .+..-+=+.-|-.--+| -++++|
T Consensus 182 A~l~Gv~----eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v-~g~VgIDm~AGPSEilViAD~~a~ 254 (423)
T 4gic_A 182 AYISGVD----RVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLV-FGQVGIDMVAGPSEILVISDGRTD 254 (423)
T ss_dssp HHHHTCC----EEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHH-BTTBEECCCCCCCEEEEEECSCSC
T ss_pred HHhcCCc----EEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHh-cCCcCcccccccceEEEEeCCCCC
Confidence 4556653 2222224333334432 578999999999887543 2222 12111222222222333 345689
Q ss_pred HHHHHHHHHHHhhccCCCccccCceEEEecc--cHHHHHHHHHHHHhhc
Q 015137 284 VNTAADMALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAW 330 (412)
Q Consensus 284 l~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~--v~~~f~~~L~~~~~~~ 330 (412)
.+..+..++..+=+... .+.++|..+ +.+++.+.+.+.++.+
T Consensus 255 p~~vAaDLlsQAEHd~~-----a~~iLvT~s~~la~~V~~~i~~~l~~l 298 (423)
T 4gic_A 255 PDWIAMDLFSQAEHDED-----AQAILISPDAAHLEAVQASIERLLPGM 298 (423)
T ss_dssp HHHHHHHHHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHhhccCCC-----CeEEEEeCcHHHHHHHHHHHHHHHhhC
Confidence 99999998887766643 334666554 4455555555544443
No 54
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=62.69 E-value=17 Score=29.73 Aligned_cols=114 Identities=18% Similarity=0.135 Sum_probs=74.9
Q ss_pred ceEEEECCCc-hhHHhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhHHHHHHhCC
Q 015137 161 GVVGHIIPWN-FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTAGAAIASHM 237 (412)
Q Consensus 161 Gvv~~i~p~n-~P~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~-aGlP~g~v~~v~g-~~~~~~~~l~~~~ 237 (412)
|.++++..-+ =+-...+.+-...++.|..++- |.-|+ +.|.+ .|+|-..++-++. ...++++.+ .+.
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I-~~g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA-----TGTTG----NLISRATGMNVNAMLSGPMGGDQQVGALI-SEG 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEE-----ETTHH----HHHHHHHCCCCEEECCGGGTHHHHHHHHH-HTT
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEE-----ccHHH----HHHHHHhCceeEEEEecCCCCCchHHHHH-HCC
Confidence 6555555433 4666666666777778987775 22344 44555 7999776654432 233455544 566
Q ss_pred CcCEEEeeCC-------hHHHHHHHHHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCC
Q 015137 238 DIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300 (412)
Q Consensus 238 ~v~~v~ftGs-------~~~g~~i~~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~G 300 (412)
.|+.|.||-+ ..-+..|.+.|. .+..|+...+ ..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~-~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLAT-VWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHH-HTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 8999999876 456788999888 6667877643 456777777777754
No 55
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=62.22 E-value=31 Score=29.01 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=32.6
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015137 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (412)
Q Consensus 184 LaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~ 226 (412)
-.+||-+|+|..|-. +..++.++...++|++++-.|-|++
T Consensus 114 ~~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGDD 153 (180)
T 3v4g_A 114 DHNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGDD 153 (180)
T ss_dssp EECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECSS
T ss_pred eecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecCC
Confidence 347999999987765 5678888888889999999999854
No 56
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=53.56 E-value=1.6e+02 Score=28.29 Aligned_cols=191 Identities=19% Similarity=0.229 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHhhhhhcCeeeeccCCccceeeecCCceEEEECCC---chhHHhhHHHHHHHhhcCCEEEE--ecCCC
Q 015137 123 IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIV--KPAEQ 197 (412)
Q Consensus 123 v~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~ALaaGn~vv~--kps~~ 197 (412)
+..+.+.++.|...-.+ .........|.....++.|+--|++..|. -||- +.+...+||-.+|+.=|+ -|+..
T Consensus 88 i~~A~~nI~~fH~~Q~~-~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~i 165 (434)
T 1kae_A 88 MAVAVKNIETFHTAQKL-PPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPI 165 (434)
T ss_dssp HHHHHHHHHHHHHTTCC-CCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSSC
T ss_pred HHHHHHHHHHHHHHhcC-CCceEEecCCcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCCC
Confidence 44556666665533221 11122223466677889999999999995 3554 445667899999986554 34422
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHH----hCCCcCEEEeeCChHHHHHHHHHHHhCCCCceeeec-CC
Q 015137 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL-GG 272 (412)
Q Consensus 198 ~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~----~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~v~~el-gG 272 (412)
.| .+.-+...+|..+ +..-.|.+.-.+|. +-|.||.|+=.|..-+...= +... .....|-..+ .|
T Consensus 166 ~p----~iL~AA~l~Gv~e----Iy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AK-r~Vs-~~~G~VgIDm~AG 235 (434)
T 1kae_A 166 AD----EILYAAQLCGVQD----VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAK-RQVS-QRLDGAAIDMPAG 235 (434)
T ss_dssp CH----HHHHHHHHTTCCE----EEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHH-HHHH-HCTTSCEESCCCC
T ss_pred CH----HHHHHHHHcCCCE----EeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHH-HHhH-hhcCccccCCCCC
Confidence 22 2233345566532 22222333333332 24889999999998764321 1111 0011222221 23
Q ss_pred CCC--eEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecc--cHHHHHHHHHHHHhhc
Q 015137 273 KSP--LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAW 330 (412)
Q Consensus 273 ~~~--~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~--v~~~f~~~L~~~~~~~ 330 (412)
.+= +|-+++||.+..+..++..+=+... .+.++|..+ ..+++.+.+.+.+..+
T Consensus 236 PSEilViAD~tAnp~~vAaDLLsQAEHd~~-----a~aiLvT~s~~la~~V~~ev~~ql~~l 292 (434)
T 1kae_A 236 PSEVLVIADSGATPDFVASDLLSQAEHGPD-----SQVILLTPAADMARRVAEAVERQLAEL 292 (434)
T ss_dssp CCEEEEEECTTSCHHHHHHHHHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHhccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhC
Confidence 333 3344579999999998887766542 334666544 4555555555555444
No 57
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=53.05 E-value=15 Score=32.20 Aligned_cols=69 Identities=10% Similarity=0.141 Sum_probs=47.5
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHH
Q 015137 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (412)
Q Consensus 177 ~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (412)
+..++..+.+||-||++-+. +-....+..+|... +|.|++++++.+. +- ...-..+.+.++.+...-..
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s~-~Y----~~~~~cnilgls~~v~iP~~ 89 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYSS-QY----EEAYRCNFLGLSPHVQIPPH 89 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEES-SC----CCTTTCSEEEECTTCCCCHH
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccch-hh----cchhheeeecCCCCcccCcc
Confidence 45677788899999999876 44555567777777 9999999986522 21 12335667777777665443
No 58
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=49.53 E-value=1.1e+02 Score=25.31 Aligned_cols=40 Identities=20% Similarity=0.323 Sum_probs=31.0
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015137 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (412)
Q Consensus 183 ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~ 226 (412)
.=.+||-+|+|-.|-. +..++.++...++| +++-.|-|++
T Consensus 108 v~~~~nlvVikT~PG~---A~~vA~~iD~~~~~-eIlGTIAGDD 147 (170)
T 3lap_A 108 TDDSGNLAVLRTPPGA---AHYLASAIDRAALP-QVVGTIAGDD 147 (170)
T ss_dssp EEEETTEEEEECSTTC---HHHHHHHHHHHTCT-TEEEEEECSS
T ss_pred EeecCCEEEEEeCCCc---HHHHHHHHHhCCCC-CeEEEEecCC
Confidence 3457999999987765 56788888888776 7899888853
No 59
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=49.29 E-value=19 Score=30.24 Aligned_cols=119 Identities=16% Similarity=0.073 Sum_probs=77.9
Q ss_pred eecCC-ceEEEECCCc-hhHHhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhHHH
Q 015137 156 LREPI-GVVGHIIPWN-FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTAGA 231 (412)
Q Consensus 156 ~~~P~-Gvv~~i~p~n-~P~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~-aGlP~g~v~~v~g-~~~~~~~ 231 (412)
..-|. |.++++..-+ =+-...+.+-...++.|..++- |.-|+ +.|.+ .|+|-..++-++- ....+++
T Consensus 22 ~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~pqI~d 92 (178)
T 1vmd_A 22 IFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLGGDQQIGA 92 (178)
T ss_dssp EEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHH
T ss_pred eeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCCCCchHHH
Confidence 33444 7666555544 4666666667777778998775 34444 44555 7999766654332 2334555
Q ss_pred HHHhCCCcCEEEeeCC-------hHHHHHHHHHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCC
Q 015137 232 AIASHMDIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300 (412)
Q Consensus 232 ~l~~~~~v~~v~ftGs-------~~~g~~i~~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~G 300 (412)
.+ .+..|+.|.||-+ ..-+..|.+.|. .+..|+...+ ..++.++.+.+++..
T Consensus 93 ~I-~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~-~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 93 MI-AEGKIDVLIFFWDPLEPQAHDVDVKALIRIAT-VYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HH-HTTSCCEEEEECCSSSCCTTSCCHHHHHHHHH-HTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred HH-HCCCccEEEEccCccCCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 44 5668999999877 235788998888 6667877643 557788888887764
No 60
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=43.55 E-value=22 Score=28.60 Aligned_cols=63 Identities=13% Similarity=0.036 Sum_probs=44.4
Q ss_pred HHHHHHcCCCCCcEEEEeCC-c----hhHHHHHHhCCCcCEEEeeCCh-----HHHHHHHHHHHhCCCCceeeec
Q 015137 206 AHLAKLAGVPDGVLNVVPGF-G----PTAGAAIASHMDIDKVSFTGST-----DVGRQVMQAAATSNLKPVSLEL 270 (412)
Q Consensus 206 ~~~~~~aGlP~g~v~~v~g~-~----~~~~~~l~~~~~v~~v~ftGs~-----~~g~~i~~~a~~~~~~~v~~el 270 (412)
++.|.+.|+|-..++-++.. . +.+.+.+ .+..|+.|.+|-+. .-+..|.+.|. .+..|++.++
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i-~~g~i~lVInt~~~~~~~~~d~~~iRR~Av-~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLI-RDGSIDLVINLPNNNTKFVHDNYVIRRTAV-DSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHH-HTTSCCEEEECCCCCGGGHHHHHHHHHHHH-HTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHH-HCCCceEEEECCCCCCcCCccHHHHHHHHH-HhCCCeEcCH
Confidence 45567899998877766542 2 4566655 46689999998665 36788888888 6668887654
No 61
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=42.50 E-value=72 Score=21.09 Aligned_cols=46 Identities=15% Similarity=0.284 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 015137 57 DKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEA 108 (412)
Q Consensus 57 ~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~ 108 (412)
+.++.+..+++.-+|-..|.|..- ..|+-+...|.+-++.|+.-+.
T Consensus 6 t~eq~~aILkaLdeaIe~GPWe~S------NFLRvIGKnL~eIRd~F~~~i~ 51 (57)
T 3fxd_A 6 SDEQKETILKALNDAIEKGPWDKS------NFLRVIGKKLIAIRDRFLKRIG 51 (57)
T ss_dssp CHHHHHHHHHHHHHHHHHSCTTSC------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCchHH------HHHHHHHHhHHHHHHHHHHHhc
Confidence 556777777777777666789874 5677788888888888887653
No 62
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=37.04 E-value=13 Score=29.78 Aligned_cols=87 Identities=15% Similarity=0.131 Sum_probs=54.0
Q ss_pred hHHhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEe-CCchhHHHHHHhCCCcCEEEeeCC--
Q 015137 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVP-GFGPTAGAAIASHMDIDKVSFTGS-- 247 (412)
Q Consensus 172 P~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~-aGlP~g~v~~v~-g~~~~~~~~l~~~~~v~~v~ftGs-- 247 (412)
+-...+.+-...++.|..++- |.-|+ +.|.+ .|++-..++-++ +.+..+++.+ .+..++.|.||-+
T Consensus 16 ~~~v~~a~~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I-~~geIdlVInt~~pl 85 (134)
T 2xw6_A 16 EEMVAFCQRHREVLARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARV-AEGRILAVIFFRDPL 85 (134)
T ss_dssp HHHHHHHHHTHHHHTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHH-HTTCEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCCCcchHHHHH-HCCCccEEEEccCcc
Confidence 444444444555556776553 33444 44455 799987776565 5344555555 5668999999977
Q ss_pred -----hHHHHHHHHHHHhCCCCceeee
Q 015137 248 -----TDVGRQVMQAAATSNLKPVSLE 269 (412)
Q Consensus 248 -----~~~g~~i~~~a~~~~~~~v~~e 269 (412)
..-+..|.+.+. .+..|+...
T Consensus 86 ~~~~h~~D~~~IrR~A~-~~~IP~~T~ 111 (134)
T 2xw6_A 86 TAQPHEPDVQALLRVCD-VHGVPLATN 111 (134)
T ss_dssp TCCTTSCCSHHHHHHHH-HHTCCEECS
T ss_pred cCCCccchHHHHHHHHH-HcCCCeEcC
Confidence 234577888887 555676654
No 63
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=34.58 E-value=79 Score=21.88 Aligned_cols=56 Identities=11% Similarity=0.125 Sum_probs=38.7
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHH
Q 015137 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (412)
Q Consensus 186 aGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a 258 (412)
.+|-+|+|-.|-. +..++.++.+.++|. ++-.+-|++ . .....-+...++.+.+..
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGDD-T------------Ilvi~r~~~~a~~l~~~i 67 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDD-T------------CLIICRTPKDAKKVSNQL 67 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECSS-E------------EEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeCC-E------------EEEEECCHHHHHHHHHHH
Confidence 6999999987655 567888888887766 899888853 1 234444555666665554
No 64
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=33.71 E-value=86 Score=22.21 Aligned_cols=37 Identities=22% Similarity=0.399 Sum_probs=29.3
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015137 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (412)
Q Consensus 186 aGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~ 226 (412)
++|-+|+|-.|-. +..++.++.+.++|. ++-.+-|++
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGDD 56 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGDD 56 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECSS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCC
Confidence 7999999987655 567888888887765 888888853
No 65
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=31.61 E-value=62 Score=22.96 Aligned_cols=38 Identities=18% Similarity=0.364 Sum_probs=30.6
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015137 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (412)
Q Consensus 186 aGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~ 226 (412)
++|-+|+|-.|-. +..++.++.+.+.+++++-.+-|++
T Consensus 14 ~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGDD 51 (78)
T 1xxa_A 14 NDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGDD 51 (78)
T ss_dssp CSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECSS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecCC
Confidence 6899999987655 6778888877778889999998853
No 66
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=30.70 E-value=36 Score=26.97 Aligned_cols=43 Identities=14% Similarity=0.053 Sum_probs=30.4
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHHH
Q 015137 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (412)
Q Consensus 217 g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~ 259 (412)
|.+.+++|+..+.-....+.+.+.+|.+||+......+.+.+.
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~ 95 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAE 95 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHH
Confidence 5688887866544333333257899999999888788777776
No 67
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=30.23 E-value=77 Score=22.71 Aligned_cols=56 Identities=13% Similarity=0.096 Sum_probs=38.4
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHH
Q 015137 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (412)
Q Consensus 186 aGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a 258 (412)
+||-+|+|-.|-. +..++.++.+.++|. ++-.+-|++ . .....-+...+..+.+..
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGDD-T------------Ilvi~r~~~~a~~l~~~l 79 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGDD-T------------ILIICRTPEDTEGVKNRL 79 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECSS-E------------EEEECSSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCC-E------------EEEEECCHHHHHHHHHHH
Confidence 7999999987655 677888888887665 888888843 1 233444555556655544
No 68
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=29.42 E-value=71 Score=26.35 Aligned_cols=53 Identities=19% Similarity=0.016 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHH---hCCCcCEEEeeCChHHH
Q 015137 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA---SHMDIDKVSFTGSTDVG 251 (412)
Q Consensus 199 ~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~---~~~~v~~v~ftGs~~~g 251 (412)
-..+.+|.+.|.+.|+.--...+++.+...+...+. .....|.|..||+...+
T Consensus 39 D~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 39 DESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred cchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 346678899999999865555666654344444443 34678999999998644
No 69
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=28.06 E-value=50 Score=27.22 Aligned_cols=53 Identities=21% Similarity=0.171 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHh---CCCcCEEEeeCChHHH
Q 015137 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG 251 (412)
Q Consensus 199 ~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~---~~~v~~v~ftGs~~~g 251 (412)
-..+..|.+.+.+.|+......+++.+...+.+.|.+ ..+.|.|..||++..+
T Consensus 30 Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 30 DKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred cChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 3455678888889888655566666544445555533 2368999999998654
No 70
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=27.78 E-value=64 Score=26.48 Aligned_cols=51 Identities=18% Similarity=0.209 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhC--CCcCEEEeeCChHHH
Q 015137 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVG 251 (412)
Q Consensus 200 ~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~--~~v~~v~ftGs~~~g 251 (412)
.....|.+++.+.|...-...+++.+ ..+.+.|.+. ...|.|..||++..+
T Consensus 27 sn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g 79 (164)
T 3pzy_A 27 RCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIA 79 (164)
T ss_dssp CHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 34567888889999876667778776 6666666442 368999999988754
No 71
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=27.59 E-value=79 Score=19.90 Aligned_cols=28 Identities=4% Similarity=0.048 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhC
Q 015137 85 RRGIMLKFADLIEEHAEVLAVLEALDAG 112 (412)
Q Consensus 85 R~~~L~~~a~~l~~~~~~l~~~~~~e~G 112 (412)
..++|..+...|.+-++++++++-.|..
T Consensus 13 KqEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 13 KQELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578888888899999999988877654
No 72
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=27.27 E-value=68 Score=24.88 Aligned_cols=80 Identities=11% Similarity=0.145 Sum_probs=47.1
Q ss_pred HHHHHhhccCCCcccc--CceEEEecccHHHHHHHHHHHHhhcccCCCCCCCCCc-------cccCCHHHHHHHHHHHHH
Q 015137 290 MALLGILFNKGEICVA--SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ-------GPQVDKKQFDRILSYIEH 360 (412)
Q Consensus 290 ~i~~~~~~~~GQ~C~a--~~~v~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~-------gpl~~~~~~~~~~~~i~~ 360 (412)
..+.......+-.|.. ....+++.+.++++.+.+.+.+..+.--+|+.++..- .|-.+.. -+..+|+.
T Consensus 36 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~---~~~~ll~~ 112 (135)
T 2v9v_A 36 KLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPAR---VYQALLEE 112 (135)
T ss_dssp HHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHH---HHHHHHHH
T ss_pred HHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHH---HHHHHHHH
Confidence 3333443333333433 2344899999999999999999986555565544221 1212222 24567788
Q ss_pred HHHcCCEEEeCC
Q 015137 361 GKREGATLLTGG 372 (412)
Q Consensus 361 a~~~Ga~v~~gg 372 (412)
..++|.-...|+
T Consensus 113 l~~~g~l~~~~~ 124 (135)
T 2v9v_A 113 WSREGRLQLAAN 124 (135)
T ss_dssp HHHTTSEEECSS
T ss_pred HHHCCCEEecCC
Confidence 888886555444
No 73
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=24.85 E-value=88 Score=23.68 Aligned_cols=104 Identities=15% Similarity=0.206 Sum_probs=67.7
Q ss_pred EEEeeCChHHHHHHHHHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEEecccHHHHH
Q 015137 241 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320 (412)
Q Consensus 241 ~v~ftGs~~~g~~i~~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~ 320 (412)
.|.|...+..-+.|.+... ..+.+++ ++..|-|-..--+.+ .-|-..|-. .--| +-.+.|.
T Consensus 5 fvvfssdpeilkeivreik-rqgvrvv---------llysdqdekrrrerl--eefekqgvd-----vrtv--edkedfr 65 (162)
T 2l82_A 5 FVVFSSDPEILKEIVREIK-RQGVRVV---------LLYSDQDEKRRRERL--EEFEKQGVD-----VRTV--EDKEDFR 65 (162)
T ss_dssp EEEEESCHHHHHHHHHHHH-HTTCEEE---------EEECCSCHHHHHHHH--HHHHTTTCE-----EEEC--CSHHHHH
T ss_pred EEEecCCHHHHHHHHHHHH-hCCeEEE---------EEecCchHHHHHHHH--HHHHHcCCc-----eeee--ccHHHHH
Confidence 4778888888888888777 3434444 345566654433332 345555521 1111 2358899
Q ss_pred HHHHHHHhhcccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEe
Q 015137 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370 (412)
Q Consensus 321 ~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 370 (412)
+.+++...++. ..++--+++....+-+..+|++|++.|.++..
T Consensus 66 enireiweryp-------qldvvvivttddkewikdfieeakergvevfv 108 (162)
T 2l82_A 66 ENIREIWERYP-------QLDVVVIVTTDDKEWIKDFIEEAKERGVEVFV 108 (162)
T ss_dssp HHHHHHHHHCT-------TCCEEEEEECCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhCC-------CCcEEEEEecCcHHHHHHHHHHHHhcCcEEEE
Confidence 99998888763 34444556666778999999999999987653
No 74
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=23.22 E-value=69 Score=26.94 Aligned_cols=53 Identities=19% Similarity=0.061 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhC--CCcCEEEeeCChHHHH
Q 015137 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVGR 252 (412)
Q Consensus 200 ~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~--~~v~~v~ftGs~~~g~ 252 (412)
.....|.+++.+.|...-...+++.+...+.+.|.+. ...|.|..||++..+.
T Consensus 49 sn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 49 HSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp SHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred cHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 3566788889999876655667766544555555432 5689999999987653
No 75
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=21.98 E-value=4.5e+02 Score=24.03 Aligned_cols=140 Identities=11% Similarity=-0.000 Sum_probs=74.8
Q ss_pred EEEECCCchhHHhhHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEE
Q 015137 163 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 242 (412)
Q Consensus 163 v~~i~p~n~P~~~~~~~~~~ALaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v 242 (412)
+++|+..+.- .....+++...+.-|+--....+..+..+++ +.|.+. +. . + .+.|++++++|.|
T Consensus 29 vgiiG~G~~~----~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~---~~~~~~----~~-~---~-~~~ll~~~~vD~V 92 (361)
T 3u3x_A 29 FAAVGLNHNH----IYGQVNCLLRAGARLAGFHEKDDALAAEFSA---VYADAR----RI-A---T-AEEILEDENIGLI 92 (361)
T ss_dssp EEEECCCSTT----HHHHHHHHHHTTCEEEEEECSCHHHHHHHHH---HSSSCC----EE-S---C-HHHHHTCTTCCEE
T ss_pred EEEECcCHHH----HHHHHHHhhcCCcEEEEEEcCCHHHHHHHHH---HcCCCc----cc-C---C-HHHHhcCCCCCEE
Confidence 3555555421 1223444443444444444455555444443 333221 12 2 2 4556778899999
Q ss_pred EeeCChHHHHHHHHHHHhCCCCceeeecCCCCCeEEcCCCCHHHHHHHHHHHhhccCCCccccCceEEE-ecccHH-HHH
Q 015137 243 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV-QEGIYD-EFE 320 (412)
Q Consensus 243 ~ftGs~~~g~~i~~~a~~~~~~~v~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V-~~~v~~-~f~ 320 (412)
+....+..-..+...+. +..|.|++|=. + ..+++.+ +.++..+- .+|. .+.| +...++ ...
T Consensus 93 ~I~tp~~~H~~~~~~al-~aGkhVl~EKP----l----a~~~~ea-~~l~~~a~-~~g~------~l~v~~~~R~~~p~~ 155 (361)
T 3u3x_A 93 VSAAVSSERAELAIRAM-QHGKDVLVDKP----G----MTSFDQL-AKLRRVQA-ETGR------IFSILYSEHFESPAT 155 (361)
T ss_dssp EECCCHHHHHHHHHHHH-HTTCEEEEESC----S----CSSHHHH-HHHHHHHH-TTCC------CEEEECHHHHTCHHH
T ss_pred EEeCChHHHHHHHHHHH-HCCCeEEEeCC----C----CCCHHHH-HHHHHHHH-HcCC------EEEEechHhhCCHHH
Confidence 99998888888777777 55577776631 1 2245553 33443332 2332 2334 334464 677
Q ss_pred HHHHHHHhhcccCCC
Q 015137 321 KKLVEKAKAWVVGDP 335 (412)
Q Consensus 321 ~~L~~~~~~~~~g~p 335 (412)
.++++.+++=.+|.+
T Consensus 156 ~~~k~~i~~g~iG~i 170 (361)
T 3u3x_A 156 VKAGELVAAGAIGEV 170 (361)
T ss_dssp HHHHHHHHTTTTSSE
T ss_pred HHHHHHHHcCCCCCe
Confidence 788888775445543
No 76
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=20.99 E-value=4.8e+02 Score=23.96 Aligned_cols=87 Identities=11% Similarity=0.044 Sum_probs=52.0
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe-CC-------chhHHHHHHhCCCcCEEEe---eCChHHHH
Q 015137 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP-GF-------GPTAGAAIASHMDIDKVSF---TGSTDVGR 252 (412)
Q Consensus 184 LaaGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~-g~-------~~~~~~~l~~~~~v~~v~f---tGs~~~g~ 252 (412)
...|+.-++-=|- .+ +..+...+.+.|+. .=.++. |+ -.+..++|.++|+.+.|.. .|+... +
T Consensus 166 ~~~G~vgivSqSG--~l-~~~i~~~~~~~g~G--~S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e-~ 239 (334)
T 3mwd_B 166 YRPGSVAYVSRSG--GM-SNELNNIISRTTDG--VYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEE-Y 239 (334)
T ss_dssp TSCCSEEEEESCH--HH-HHHHHHHHHHHSSC--EEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHH-H
T ss_pred CCCCCEEEEeCch--HH-HHHHHHHHHhcCCC--eEEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHH-H
Confidence 3468877774332 33 33444555566663 333343 21 1245678889999999886 455555 6
Q ss_pred HHHHHHHh-CCCCceeeecCCCCCe
Q 015137 253 QVMQAAAT-SNLKPVSLELGGKSPL 276 (412)
Q Consensus 253 ~i~~~a~~-~~~~~v~~elgG~~~~ 276 (412)
..++.+.. ...|||+.--.|.+..
T Consensus 240 ~~~~~~r~~~~~KPVV~~kaGrs~~ 264 (334)
T 3mwd_B 240 KICRGIKEGRLTKPIVCWCIGTCAT 264 (334)
T ss_dssp HHHHHHHTTSCCSCEEEEEECTTCC
T ss_pred HHHHHHHhhcCCCCEEEEEcCCCcc
Confidence 66665542 2568999877777664
No 77
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=20.64 E-value=1.5e+02 Score=23.87 Aligned_cols=56 Identities=11% Similarity=0.125 Sum_probs=38.9
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEeeCChHHHHHHHHHH
Q 015137 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (412)
Q Consensus 186 aGn~vv~kps~~~~~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a 258 (412)
+||-+|+|..|-. +..++.++...++|. ++-.|-|++ . .+...-+...+..+.+..
T Consensus 90 ~~n~vVikT~PG~---A~~va~~iD~~~~~e-IlGTIAGDD-T------------Ilvi~r~~~~a~~l~~~l 145 (149)
T 1b4a_A 90 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDD-T------------CLIICRTPKDAKKVSNQL 145 (149)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHTCTT-EEEEEECSS-E------------EEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCC-E------------EEEEeCCHHHHHHHHHHH
Confidence 7999999988655 677888888887765 899898853 1 233444555566655544
Done!