Query 015139
Match_columns 412
No_of_seqs 140 out of 1144
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 07:22:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015139.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015139hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3us8_A Isocitrate dehydrogenas 100.0 1E-115 5E-120 893.9 28.2 403 2-409 23-426 (427)
2 1lwd_A Isocitrate dehydrogenas 100.0 5E-113 2E-117 874.8 29.4 408 2-410 1-412 (413)
3 2qfy_A Isocitrate dehydrogenas 100.0 8E-113 3E-117 875.5 26.6 405 3-410 16-425 (427)
4 1zor_A Isocitrate dehydrogenas 100.0 5E-111 2E-115 857.2 29.6 394 3-407 1-398 (399)
5 2uxq_A Isocitrate dehydrogenas 100.0 2E-111 7E-116 859.8 27.0 390 5-406 2-399 (402)
6 4aoy_A Isocitrate dehydrogenas 100.0 2E-109 7E-114 842.8 26.8 399 3-406 1-400 (402)
7 1x0l_A Homoisocitrate dehydrog 100.0 2E-106 6E-111 803.7 32.9 327 10-405 2-331 (333)
8 3flk_A Tartrate dehydrogenase/ 100.0 2E-106 6E-111 812.3 30.2 349 8-405 4-361 (364)
9 3u1h_A 3-isopropylmalate dehyd 100.0 2E-106 7E-111 814.3 28.3 351 7-406 21-378 (390)
10 3udu_A 3-isopropylmalate dehyd 100.0 1E-106 4E-111 811.0 26.7 344 10-406 7-357 (361)
11 2y3z_A 3-isopropylmalate dehyd 100.0 5E-106 2E-110 806.7 27.4 341 9-407 3-350 (359)
12 3ty4_A Probable homoisocitrate 100.0 4E-105 1E-109 801.5 29.9 333 9-405 10-365 (366)
13 3vmk_A 3-isopropylmalate dehyd 100.0 2E-105 6E-110 806.3 27.3 353 9-405 13-372 (375)
14 3r8w_A 3-isopropylmalate dehyd 100.0 1E-105 4E-110 812.6 24.5 356 7-411 40-404 (405)
15 3dms_A Isocitrate dehydrogenas 100.0 8E-105 3E-109 814.6 30.1 352 8-404 35-426 (427)
16 1cnz_A IPMDH, IMDH, protein (3 100.0 8E-105 3E-109 800.6 27.6 348 9-405 4-360 (363)
17 1wpw_A 3-isopropylmalate dehyd 100.0 8E-104 3E-108 785.5 30.8 327 10-404 2-335 (336)
18 3blx_B Isocitrate dehydrogenas 100.0 3E-104 1E-108 792.9 25.4 326 9-404 21-354 (354)
19 2e0c_A 409AA long hypothetical 100.0 2E-103 6E-108 801.3 31.9 359 3-405 16-407 (409)
20 1a05_A IPMDH, IMDH, 3-isopropy 100.0 4E-104 1E-108 794.9 24.7 347 10-405 2-355 (358)
21 1vlc_A 3-isopropylmalate dehyd 100.0 7E-104 2E-108 792.3 26.3 343 10-406 13-364 (366)
22 2d1c_A Isocitrate dehydrogenas 100.0 2E-103 7E-108 809.9 29.2 343 2-408 8-359 (496)
23 2iv0_A Isocitrate dehydrogenas 100.0 2E-103 8E-108 800.6 29.2 358 4-405 20-410 (412)
24 3blx_A Isocitrate dehydrogenas 100.0 9E-104 3E-108 787.9 24.3 328 8-406 16-348 (349)
25 2d4v_A Isocitrate dehydrogenas 100.0 1E-102 4E-107 798.1 30.3 350 10-404 27-429 (429)
26 1tyo_A Isocitrate dehydrogenas 100.0 1E-102 4E-107 799.4 30.2 352 10-405 36-422 (435)
27 1hqs_A Isocitrate dehydrogenas 100.0 9E-103 3E-107 798.6 28.4 351 10-404 20-422 (423)
28 1w0d_A 3-isopropylmalate dehyd 100.0 9E-103 3E-107 778.7 26.9 333 10-404 2-337 (337)
29 1itw_A Isocitrate dehydrogenas 96.2 0.081 2.8E-06 55.4 14.8 184 176-370 453-644 (741)
30 2b0t_A NADP isocitrate dehydro 96.1 0.082 2.8E-06 55.3 14.3 184 176-370 449-640 (738)
31 1yxo_A 4-hydroxythreonine-4-ph 93.3 0.046 1.6E-06 54.0 3.4 138 182-342 173-323 (328)
32 2hi1_A 4-hydroxythreonine-4-ph 93.2 0.046 1.6E-06 54.0 3.3 137 182-341 180-328 (330)
33 3lxy_A 4-hydroxythreonine-4-ph 93.1 0.05 1.7E-06 53.9 3.4 137 182-342 178-328 (334)
34 4aty_A Terephthalate 1,2-CIS-d 92.9 0.051 1.8E-06 54.1 3.2 133 182-341 195-340 (349)
35 3tsn_A 4-hydroxythreonine-4-ph 91.7 0.091 3.1E-06 52.5 3.2 60 277-342 303-363 (367)
36 4aoy_A Isocitrate dehydrogenas 88.8 0.12 4.2E-06 52.3 1.4 20 143-162 125-144 (402)
37 3us8_A Isocitrate dehydrogenas 81.2 0.35 1.2E-05 49.4 0.5 20 143-162 148-167 (427)
38 2e0c_A 409AA long hypothetical 72.5 1.5 5.1E-05 44.5 2.2 21 127-147 142-162 (409)
39 2d4v_A Isocitrate dehydrogenas 71.3 1.4 4.7E-05 45.0 1.6 21 127-147 146-166 (429)
40 2iv0_A Isocitrate dehydrogenas 71.0 1.5 5.1E-05 44.5 1.8 21 127-147 142-162 (412)
41 1w0d_A 3-isopropylmalate dehyd 70.9 2 6.9E-05 42.4 2.7 21 128-148 116-136 (337)
42 1wpw_A 3-isopropylmalate dehyd 68.6 3.1 0.00011 41.0 3.5 21 128-148 110-130 (336)
43 3flk_A Tartrate dehydrogenase/ 66.8 3.3 0.00011 41.3 3.3 23 127-149 127-149 (364)
44 3blx_A Isocitrate dehydrogenas 66.5 2.4 8E-05 42.1 2.1 20 128-147 123-142 (349)
45 3ty4_A Probable homoisocitrate 65.5 3.9 0.00013 40.8 3.5 21 128-148 124-144 (366)
46 1hqs_A Isocitrate dehydrogenas 65.3 2.4 8.2E-05 43.2 2.0 21 127-147 137-157 (423)
47 3dms_A Isocitrate dehydrogenas 65.1 2.5 8.6E-05 43.1 2.1 21 127-147 156-176 (427)
48 1tyo_A Isocitrate dehydrogenas 63.2 2.5 8.7E-05 43.1 1.7 21 127-147 152-172 (435)
49 2uxq_A Isocitrate dehydrogenas 63.2 1.5 5.1E-05 44.3 -0.0 20 143-162 124-143 (402)
50 3blx_B Isocitrate dehydrogenas 59.6 2.7 9.1E-05 41.8 1.0 21 127-147 128-148 (354)
51 3r8w_A 3-isopropylmalate dehyd 58.2 4.9 0.00017 40.6 2.7 23 127-149 167-189 (405)
52 1x0l_A Homoisocitrate dehydrog 54.7 4.9 0.00017 39.6 2.0 21 127-147 110-130 (333)
53 3vmk_A 3-isopropylmalate dehyd 53.9 5.8 0.0002 39.7 2.4 22 127-148 140-161 (375)
54 1vlc_A 3-isopropylmalate dehyd 52.3 4.7 0.00016 40.2 1.5 23 127-149 139-161 (366)
55 2d1c_A Isocitrate dehydrogenas 49.0 8.9 0.0003 39.7 2.9 25 127-151 130-154 (496)
56 3u1h_A 3-isopropylmalate dehyd 48.7 5.3 0.00018 40.2 1.2 22 127-148 148-169 (390)
57 1yxo_A 4-hydroxythreonine-4-ph 47.1 10 0.00035 37.2 2.9 21 8-28 1-23 (328)
58 2y3z_A 3-isopropylmalate dehyd 47.0 6.6 0.00023 39.0 1.5 21 127-147 128-148 (359)
59 1lwd_A Isocitrate dehydrogenas 46.5 5.3 0.00018 40.5 0.8 19 143-161 126-144 (413)
60 3udu_A 3-isopropylmalate dehyd 46.4 6.1 0.00021 39.3 1.2 20 127-146 133-152 (361)
61 1cnz_A IPMDH, IMDH, protein (3 44.6 6.8 0.00023 39.0 1.2 19 127-145 131-149 (363)
62 1a05_A IPMDH, IMDH, 3-isopropy 44.4 7.4 0.00025 38.6 1.5 19 127-145 126-144 (358)
63 1zor_A Isocitrate dehydrogenas 41.0 7.7 0.00026 39.1 0.9 19 143-161 125-143 (399)
64 4aty_A Terephthalate 1,2-CIS-d 36.8 21 0.00071 35.1 3.3 21 10-30 9-31 (349)
65 2hi1_A 4-hydroxythreonine-4-ph 35.6 21 0.00071 35.0 3.1 19 11-29 8-28 (330)
66 3lxy_A 4-hydroxythreonine-4-ph 28.9 31 0.0011 33.8 3.1 19 10-28 9-29 (334)
67 3tsn_A 4-hydroxythreonine-4-ph 28.6 25 0.00085 35.0 2.3 20 10-29 5-26 (367)
68 3cx5_E Cytochrome B-C1 complex 22.2 38 0.0013 30.1 2.1 21 303-329 145-165 (185)
69 3s3t_A Nucleotide-binding prot 22.0 56 0.0019 26.1 3.0 25 187-211 16-40 (146)
70 3hgm_A Universal stress protei 20.8 62 0.0021 25.8 3.0 26 187-212 13-38 (147)
71 3fg9_A Protein of universal st 20.7 73 0.0025 25.9 3.5 27 186-212 27-53 (156)
No 1
>3us8_A Isocitrate dehydrogenase [NADP]; PSI-biology, structural genomics; 2.25A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.4e-115 Score=893.87 Aligned_cols=403 Identities=69% Similarity=1.132 Sum_probs=363.2
Q ss_pred CccceeecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCC
Q 015139 2 AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPD 81 (412)
Q Consensus 2 ~~~~~~m~~~I~vi~GDGiGpEv~~~~~~vl~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~ 81 (412)
.|+||||+++|++|||||||||||+++++||.+++++|+|+++++|++++++||+++|++++++|++++++||||++||.
T Consensus 23 ~~~~i~~~~~I~vipGDGIGpEI~~~~~~vL~~~~~~i~~~~~~~G~~~~~~tg~~lp~etl~aik~~da~LkGav~tP~ 102 (427)
T 3us8_A 23 MMAKIKVANPVVELDGDEMTRIIWQFIKDKLIHPYLDLDLEYYDLGVENRDATDDQVTIDAANAIKKHGVGVKCATITPD 102 (427)
T ss_dssp --CCEECCSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCC
T ss_pred ccccccccceEEEEcCCcccHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCC
Confidence 58999999999999999999999999999999899999999999999999999999999999999999999999999998
Q ss_pred chhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeecc-
Q 015139 82 EARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEG- 160 (412)
Q Consensus 82 ~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~- 160 (412)
+.+++|+.+.++|+|+|++|||+||||+|+||+.++++|++.++++.|++|+||||||.|.++|+.++||+++++||..
T Consensus 103 ~~~~~e~~l~~~~~s~n~~LRk~LdlyanvRPv~~~~ip~~~~~~~~DivIvREnteg~Y~g~e~~~~~~~~~~l~~~~~ 182 (427)
T 3us8_A 103 EGRVEEFKLKKMWKSPNGTIRNILGGVIFREPIICKNVPRLVPGWTKPIIVGRHAFGDQYRATDFKFPGKGKLSIKFVGE 182 (427)
T ss_dssp HHHHHHHTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEET
T ss_pred ccccccccccccccCchHHHHHHhCCeEEecceeccCCCCCCCCCCCCEEEEEeCCCCccCCceeEEecCCcceeeeecc
Confidence 7766777777789999999999999999999997788998888888999999999999999999999999999999832
Q ss_pred CCcccceeeccccCCCceEEEeeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCccc
Q 015139 161 KDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFE 240 (412)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~a~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~ 240 (412)
.+.+.+..++++.+ .+++...+||++++|||+|+||+||++|++|||+|||+|||+.|||+||++|+||++++||++|+
T Consensus 183 ~G~~~~~~~~~~~~-~~va~~~~~T~~~~eRiar~AFe~A~~r~kkVt~v~KaNIlk~tdglfr~~~~eva~~eYp~~~~ 261 (427)
T 3us8_A 183 DGQTIEHDVYDAPG-AGVALAMYNLDESITEFARASFNYGLQRKVPVYLSTKNTILKAYDGRFKDIFQKVFDEEFAAQFK 261 (427)
T ss_dssp TSCEEEEEEEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHH
T ss_pred ccccccccccccCC-CcEEEEEeeCHHHHHHHHHHHHHHHHHcCCcEEEEECcccchhhhhHHHHHHHHHHHHhCccccC
Confidence 12222233334443 56775588899999999999999999999999999999999999999999999996449998888
Q ss_pred cCCeEEceeeHHHHHHHHHhCCCccEEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccc
Q 015139 241 AAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQ 320 (412)
Q Consensus 241 ~~~I~~~~~~VDa~~~~lv~~P~~FVivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~di 320 (412)
+++|+++|+|||+||||||++|++|||||+|||||||||++|+++|||||+||+|+|+++.++||||+|||||+||++||
T Consensus 262 ~~~I~~~~~~VD~~~mqlv~~P~~FVivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~~~a~fEp~HGSAPd~~~~~i 341 (427)
T 3us8_A 262 AEKLWYEHRLIDDMVASALKWSGGYVWACKNYDGDVQSDIVAQGFGSLGLMTSVLMTPDGKTVEAEAAHGTVTRHYRQHQ 341 (427)
T ss_dssp HTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHSCTTSEEEEEECTTSCCEEEECCSCCCHHHHHHHH
T ss_pred CCCeEEEEEEHHHHHHHHhhCCCCcEEEeCCcCCcHHHHHHHHhcCChhhCceeEECCCCCeEEEeCCCCCcCCccchhc
Confidence 88999999999999999999999999999999999999999999999999999999988634999999999998888889
Q ss_pred cCCCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCCCCCcccccCHHHHHHHH
Q 015139 321 KGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAV 400 (412)
Q Consensus 321 aGk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV 400 (412)
||||++|||+|+|||++|||+|+|++++++.+.++|++|++||.+|+++|++|+|||..++ . ..+.++|+||+|+|
T Consensus 342 AGk~i~ANP~A~IlS~ammL~hlG~~~~~~~l~~~A~~Ie~Av~~~l~~g~~T~Dlgg~~~-~---~~~~~~T~e~~daV 417 (427)
T 3us8_A 342 KGEETSTNSIASIFAWTRGLAHRAKLDGNAELAKFSETLERVCVDTVESGFMTKDLALLIG-P---DQPWLSTTGFLDKI 417 (427)
T ss_dssp TTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCBHHHHHHHC-T---TCCCBCHHHHHHHH
T ss_pred CCCCceeCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCCcCcccccccc-c---CCcccCHHHHHHHH
Confidence 9999889999999999999999998877777789999999999999999999999983110 0 12369999999999
Q ss_pred HHHHHHHhc
Q 015139 401 ADDLRARLS 409 (412)
Q Consensus 401 ~~~l~~~~~ 409 (412)
+++|++.|.
T Consensus 418 ~~~l~~~l~ 426 (427)
T 3us8_A 418 DENLRKAMA 426 (427)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHhc
Confidence 999998874
No 2
>1lwd_A Isocitrate dehydrogenase; tricarboxylic acid cycle, oxidoreductase, NADP; HET: ICT; 1.85A {Sus scrofa} SCOP: c.77.1.1 PDB: 1t0l_A* 1t09_A* 3mas_B* 3map_A* 3mar_A* 3mas_A* 3inm_A* 2cmj_A* 2cmv_A*
Probab=100.00 E-value=4.6e-113 Score=874.79 Aligned_cols=408 Identities=69% Similarity=1.145 Sum_probs=354.1
Q ss_pred CccceeecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCC
Q 015139 2 AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPD 81 (412)
Q Consensus 2 ~~~~~~m~~~I~vi~GDGiGpEv~~~~~~vl~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~ 81 (412)
|.+||+|+++|++|||||||||||++++++|+.++++|+|+++++|++++++||+++|++++++|+++|++||||+++|.
T Consensus 1 ~~~~i~~~~~i~~l~GDgiGpei~~~~~~vl~~~~~~~~~~~~~~G~~~~~~~g~~lp~etl~~ik~~da~LkGav~tP~ 80 (413)
T 1lwd_A 1 ADQRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPD 80 (413)
T ss_dssp CCCCEECSSCEEEEECCHHHHHHHHHHHHHTTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCC
T ss_pred CCCcceecccEEEecCCChhHHHHHHHHHHHHhCCCCeEEEEEecCHHHHhccCCcCcHHHHHHHHHCCEEEECCccCCC
Confidence 45899999999999999999999999999999889999999999999999999999999999999999999999999998
Q ss_pred chhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccce-eecc
Q 015139 82 EARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKL-VFEG 160 (412)
Q Consensus 82 ~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~-y~g~ 160 (412)
+..+++..+.++|+|+|++|||+||||+|+||++++++|++.+++..|++|+||+|+|.|.++|++++|||+..+ |...
T Consensus 81 ~~~~~~~~~~~~~~s~~l~LR~~ldlyan~RPv~~~~~~~~~~~~~~divIvRe~t~g~Y~g~d~~~~~e~~~~~~~~~~ 160 (413)
T 1lwd_A 81 EARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPK 160 (413)
T ss_dssp HHHHHHHTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEET
T ss_pred cccCccccccccccCccHHHHHhcCCEEEEeeeeccCCCCCCCCCCCceEEEecccCCccCCceeEeccCCcceeeEecc
Confidence 654555444457899999999999999999999888899888888899999999999999999999999998544 5432
Q ss_pred CC-cccceeeccccCCCceEEEeeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCcc
Q 015139 161 KD-EKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKF 239 (412)
Q Consensus 161 ~~-~~~~~~~~~~~~~~~~a~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~ 239 (412)
++ .+.+..+++++. ++++...+||+++++||+|+||+||++|++|||+|||+|||+.|+|||+++|+||++++|||+|
T Consensus 161 ~g~~~~~~~~~~~~~-~~~~~~~~~T~~~~eRiar~AFe~A~~r~~kVt~v~KaNVlk~sdglf~~~~~eva~~eypd~~ 239 (413)
T 1lwd_A 161 DGSSAKQWEVYNFPA-GGVGMGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDF 239 (413)
T ss_dssp TCCCCEEEEEEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCcccccccccccCC-CcEEEEEEEcHHHHHHHHHHHHHHHHHhCCceEEEECCcchhhHHHHHHHHHHHHHHHhCCCcc
Confidence 22 111222222221 2333448899999999999999999999889999999999999999999999999437999777
Q ss_pred ccCCeEEceeeHHHHHHHHHhCCCccEEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEcccccccccccccc
Q 015139 240 EAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVH 319 (412)
Q Consensus 240 ~~~~I~~~~~~VDa~~~~lv~~P~~FVivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~d 319 (412)
.+.+|+++|+|||+||||||++|++|||||+|||||||||++|+++|||||+||+|+|+++.++||||+|||||++++++
T Consensus 240 ~~~~I~~~~~~VD~~~mqlv~~P~~FVivt~NlfGDILSD~aA~l~GslGl~pSanig~~~~~~~fEpvHGSAPdi~~~~ 319 (413)
T 1lwd_A 240 DKYKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREH 319 (413)
T ss_dssp HHTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECCSCCCHHHHHHH
T ss_pred cCCeEEEEEEEHHHHHHHHhcCCCceEEEecccccchHHHHHHhhcCCccccccceeCCCCCceEEeCCCCChhhhhhhh
Confidence 77779999999999999999999999999999999999999999999999999999999863389999999999888788
Q ss_pred ccCCCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCC-CCCc-ccccCHHHHH
Q 015139 320 QKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGS-KMTR-EHYLNTEEFI 397 (412)
Q Consensus 320 iaGk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~-~~~~-~~~~sT~e~~ 397 (412)
|||||++|||+|+|||++|||+|||+.+.++.+.++|++|++||.+|+++|++|+|||...+|. +..+ ++.+||+||+
T Consensus 320 ~aGk~~~ANP~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~~~~T~e~~ 399 (413)
T 1lwd_A 320 QKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFL 399 (413)
T ss_dssp HTTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHCTTSCCBTTTBCCHHHHH
T ss_pred hcCCCCccChHHHHHHHHHHHHHcCCccccchhHHHHHHHHHHHHHHHHcCCcCcccccccCCcccccccCCCCCHHHHH
Confidence 8999955999999999999999999766566677899999999999999999999997321131 1111 1368999999
Q ss_pred HHHHHHHHHHhcc
Q 015139 398 DAVADDLRARLSG 410 (412)
Q Consensus 398 daV~~~l~~~~~~ 410 (412)
|+|+++|++.|.+
T Consensus 400 daV~~~l~~~~~~ 412 (413)
T 1lwd_A 400 DTIKSNLDRALGR 412 (413)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhc
Confidence 9999999877754
No 3
>2qfy_A Isocitrate dehydrogenase [NADP]; rossmann fold, oxidoreductase; HET: AKG; 2.10A {Saccharomyces cerevisiae} PDB: 2qfw_A* 2qfx_A* 2qfv_A*
Probab=100.00 E-value=8.3e-113 Score=875.51 Aligned_cols=405 Identities=66% Similarity=1.065 Sum_probs=358.4
Q ss_pred ccceeecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCc
Q 015139 3 FQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (412)
Q Consensus 3 ~~~~~m~~~I~vi~GDGiGpEv~~~~~~vl~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~ 82 (412)
++||+|+++|++||||||||||++++.+.++.++++|+|+++++|+++++++|+++|++++++|++++++||||+++|..
T Consensus 16 ~~k~~~~~~I~~l~GDgig~evl~~~~~~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~et~~ai~~~da~lkGav~tP~~ 95 (427)
T 2qfy_A 16 FSKIKVKQPVVELDGDEMTRIIWDKIKKKLILPYLDVDLKYYDLSVESRDATSDKITQDAAEAIKKYGVGIKCATITPDE 95 (427)
T ss_dssp CCCEECSSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCH
T ss_pred cccccceeeEEEecCCCHHHHHHHHHHHHhccCCCceEEEEEecChHHHhccCCcCcHHHHHHHHHCCEEEECCcCCCCC
Confidence 57999999999999999999999999988888899999999999999999999999999999999999999999999976
Q ss_pred hhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeecc--
Q 015139 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEG-- 160 (412)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~-- 160 (412)
.+++|.+|.++|+|+|++|||.||||+|+||++++++|++.|+|++||+++||++++.|.++|++++||||||+||..
T Consensus 96 ~~~~e~~l~~~~~s~~~~lR~~ldlyan~RP~~~~~~~~l~~g~~~pl~i~R~~~g~~y~~~D~vivREnteg~Y~~~e~ 175 (427)
T 2qfy_A 96 ARVKEFNLHKMWKSPNGTIRNILGGTVFREPIVIPRIPRLVPRWEKPIIIGRHAHGDQYKATDTLIPGPGSLELVYKPSD 175 (427)
T ss_dssp HHHHHTTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCEEEEEEEECSSGGGGCEEEEECSSEEEEEEEEESC
T ss_pred cccchhhhcccccchHHHHHHhcCCEEEecccccccchhhccCCCCCeeEeecccCCccCCeeEEEeccCccceeeeccc
Confidence 544555666689999999999999999999999988999999999999999999999999999999999999999932
Q ss_pred --CCcccceeeccccCCCceEEEeeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCc
Q 015139 161 --KDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 238 (412)
Q Consensus 161 --~~~~~~~~~~~~~~~~~~a~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~ 238 (412)
|..+.+..+.++.+ .++++..++|+++++||+|+||+||++|++|||+|||+|||+.||||||++|+||++++|||+
T Consensus 176 teG~~~~~~~~~~~~~-~~v~~~~~~T~~~ieRIar~AFe~A~~r~~kVt~v~KaNVlk~s~glfr~v~~eva~~eYpd~ 254 (427)
T 2qfy_A 176 PTTAQPQTLKVYDYKG-SGVAMAMYNTDESIEGFAHSSFKLAIDKKLNLFLSTKNTILKKYDGRFKDIFQEVYEAQYKSK 254 (427)
T ss_dssp TTTSCCEEEEEEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHH
T ss_pred cCCccccccccccCCC-ceEEEEEEEcHHHHHHHHHHHHHHHHHhCCceEEEECCccchhhhHHHHHHHHHHHHHhCCCc
Confidence 11111122211212 456665789999999999999999999988999999999999999999999999954799976
Q ss_pred cccCCeEEceeeHHHHHHHHHhCCCccEEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccc
Q 015139 239 FEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRV 318 (412)
Q Consensus 239 ~~~~~I~~~~~~VDa~~~~lv~~P~~FVivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~ 318 (412)
|++.+|+++|+|||+||||||++|++|||||+|||||||||++|+++|||||+||+|+|+++..++|||+|||||++|++
T Consensus 255 ~~~~~I~~e~~~VD~~amqlV~~P~~FVivt~NlfGDILSD~aA~l~GslGl~pSanig~~~~~~~fEpvHGSAPdi~~~ 334 (427)
T 2qfy_A 255 FEQLGIHYEHRLIDDMVAQMIKSKGGFIMALKNYDGDVQSDIVAQGFGSLGLMTSILVTPDGKTFESEAAHGTVTRHYRK 334 (427)
T ss_dssp HHHHTCCEEEEEHHHHHHHHHHSCEEEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSCCEEEECCSCCCHHHHHH
T ss_pred ccCCeEEEEEEEHHHHHHHHHhCCCceEEEECccchHHHHHHHHHhcCcccccceeEeCCCCceeEecCCCCCcccccch
Confidence 66666999999999999999999999999999999999999999999999999999999885238999999999999999
Q ss_pred cccCCCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHH-cCCCCccccccccCCCCCcccccCHHHHH
Q 015139 319 HQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVE-SGKMTKDLALIIHGSKMTREHYLNTEEFI 397 (412)
Q Consensus 319 diaGk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~-~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~ 397 (412)
||||||++|||+|+|||++|||+|||++++|+.+.++|++|++||.+|++ +|++|+|||... |+ ..+.+.++|+||+
T Consensus 335 diAGk~~~ANP~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~~G~~T~Dlgg~~-g~-~~~~~~~~T~e~~ 412 (427)
T 2qfy_A 335 YQKGEETSTNSIASIFAWSRGLLKRGELDNTPALCKFANILESATLNTVQQDGIMTKDLALAC-GN-NERSAYVTTEEFL 412 (427)
T ss_dssp HHTTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHT-TC-CSGGGCCCHHHHH
T ss_pred hhcCCCCccCcHHHHHHHHHHHHHhCcccCcchhHHHHHHHHHHHHHHHHhCCCccccccccC-Cc-cccCCCCCHHHHH
Confidence 99999943999999999999999999877677778999999999999999 999999997211 21 1111247999999
Q ss_pred HHHHHHHHHHhcc
Q 015139 398 DAVADDLRARLSG 410 (412)
Q Consensus 398 daV~~~l~~~~~~ 410 (412)
|+|+++|++.|.+
T Consensus 413 daV~~~l~~~l~~ 425 (427)
T 2qfy_A 413 DAVEKRLQKEIKS 425 (427)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999887754
No 4
>1zor_A Isocitrate dehydrogenase; wild type enzyme, CIS-proline, thermostable, oxidoreductase; 2.24A {Thermotoga maritima}
Probab=100.00 E-value=4.6e-111 Score=857.25 Aligned_cols=394 Identities=53% Similarity=0.896 Sum_probs=345.6
Q ss_pred ccceeecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCc
Q 015139 3 FQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (412)
Q Consensus 3 ~~~~~m~~~I~vi~GDGiGpEv~~~~~~vl~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~ 82 (412)
|+||+|++||++|||||||||||++++++|++++++|+|+++++|++++++||+++|++++++|++++++||||+++|.+
T Consensus 1 ~~~~~~~~~I~~l~GDgiG~ei~~~v~~~l~~~~~~~~~~~~~~G~~~~~~~g~~lp~etl~~ik~~da~lkGav~tP~~ 80 (399)
T 1zor_A 1 MEKVKVKNPIVELDGDEMARVMWKMIKEKLILPYLDIQLVYFDLGIKKRDETDDQITIEAAKAIKKYGVGVKCATITPDA 80 (399)
T ss_dssp CCCEECCSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCH
T ss_pred CCcccccccEEEecCCcccHHHHHHHHHHHHhCCCCeEEEEEeCCHHHHhccCCcCcHHHHHHHHHCCEEEEcCccCCCc
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred hhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccc-eeeccC
Q 015139 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLK-LVFEGK 161 (412)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg-~y~g~~ 161 (412)
.++++..+.++|+|+|++|||+||||+|+||++++++|++.|+++.|++|+||+|+|.|.++|++++||||++ .|.+.
T Consensus 81 ~~~~~~~~~~~~~s~~l~LR~~ldlyan~RPv~~~~~~~~~~~~~~divi~Re~t~g~Y~g~d~~~~~e~t~~~~y~~e- 159 (399)
T 1zor_A 81 ERVKEYNLKKAWKSPNATIRAYLDGTVFRKPIMVKNVPPLVKRWKKPIIIGRHAYGDIYNAVEAKVEGPAEVELVVRNK- 159 (399)
T ss_dssp HHHHHHTCSSCCCCHHHHHHHHHTCEEEEEECCBTTBCCSBTTCCSCCEEEECCSSGGGGCEEEEECSSEEEEEEEESS-
T ss_pred ccCccccccccccCchHHHHHHhCCEEEEEEeecCCCCCcccCcCccceeeecccCCCcCCceeEecCCCcceeeEecc-
Confidence 4444544444789999999999999999999998889988888889999999999999999999999999954 55542
Q ss_pred CcccceeeccccCCCceEEEeeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHh---hcCCc
Q 015139 162 DEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEA---NWKSK 238 (412)
Q Consensus 162 ~~~~~~~~~~~~~~~~~a~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~---~yp~~ 238 (412)
.+.++.+++++. ++++...++|++++|||+|+||+||++|++|||+|||+|||+.|+|+|+++|+||+++ +||
T Consensus 160 -~~~~~~~~~~~~-~~~~~~~~~T~~~~eRiar~AFe~A~~r~~kVt~v~KaNvlk~sdglf~~~~~eva~~~~~~yp-- 235 (399)
T 1zor_A 160 -ENKTLLVHKFEG-NGVVMAMHNLEKSIRSFAQSCINYAISEKVDIWFATKDTISKVYHAYFKDIFQEEVDKRKEELE-- 235 (399)
T ss_dssp -SCEEEEEEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTCTTHHHHHHHHHHHHHHHTHHHHH--
T ss_pred -ccccceeeccCC-ceEEEEEEecHHHHHHHHHHHHHHHHHhCCeEEEEECcccHHHHHHHHHHHHHHHHHhhcccCC--
Confidence 111222322222 3344448899999999999999999999889999999999999999999999999531 787
Q ss_pred cccCCeEEceeeHHHHHHHHHhCCCccEEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccc
Q 015139 239 FEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRV 318 (412)
Q Consensus 239 ~~~~~I~~~~~~VDa~~~~lv~~P~~FVivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~ 318 (412)
+++|+++|+|||+||||||++|++|||||+|||||||||++|+++|||||+||+|+|+++ .+||||+|||||+|+++
T Consensus 236 --~~~I~~~~~~vD~~~mqlv~~P~~fVivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~-~~~fEpvHGSAPdi~~~ 312 (399)
T 1zor_A 236 --KAGVNYRYMLIDDAAAQILRSEGGMLWACMNYEGDIMSDMIASGFGSLGLMTSVLVSPDG-VYEFEAAHGTVRRHYYR 312 (399)
T ss_dssp --HTTCCEEEEEHHHHHHHHHHSCCCSEEEECHHHHHHHHHHHHHHHCCGGGEEEEEECTTC-CEEEEESSCCCHHHHHH
T ss_pred --CCcEEEEEEEHHHHHHHhccCCCceEEEEccchHHHHHHHHHHhcCCccccceeEecCCC-CeEEeCCCCcccccchh
Confidence 124999999999999999999999999999999999999999999999999999999986 48999999999988888
Q ss_pred cccCCCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCCCCCcccccCHHHHHH
Q 015139 319 HQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFID 398 (412)
Q Consensus 319 diaGk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~d 398 (412)
+|||||++|||+|+|||++|||+|||+++.++.+.++|++|++||.+|+++|++|+|||...+|. ..+.+||+||+|
T Consensus 313 ~iaGk~~~ANP~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~g~~T~Dlgg~~~g~---~~~~~~T~e~~d 389 (399)
T 1zor_A 313 YLKGEKTSTNPTASIFAWTGAIRKRGELDGTPEVCEFADKLEKAVINTIESGVITKDLQPFTEPP---IDKYVTLEEFID 389 (399)
T ss_dssp HTTTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCGGGGGGCSSC---CCCCCCHHHHHH
T ss_pred hhcCCCCccCcHHHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHHHHHcCCcCccccccCCCC---CCCCCCHHHHHH
Confidence 89999944999999999999999999776566678899999999999999999999998322220 001479999999
Q ss_pred HHHHHHHHH
Q 015139 399 AVADDLRAR 407 (412)
Q Consensus 399 aV~~~l~~~ 407 (412)
+|+++|++.
T Consensus 390 aV~~~l~~~ 398 (399)
T 1zor_A 390 EVKKNLEKL 398 (399)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhh
Confidence 999999654
No 5
>2uxq_A Isocitrate dehydrogenase native; psychrophilic, cold adaptation, thermal stability, oxidoreductase; HET: SO4 PEG; 1.75A {Desulfotalea psychrophila} PDB: 2uxr_A*
Probab=100.00 E-value=2.2e-111 Score=859.82 Aligned_cols=390 Identities=48% Similarity=0.797 Sum_probs=344.9
Q ss_pred ceeecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCchh
Q 015139 5 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR 84 (412)
Q Consensus 5 ~~~m~~~I~vi~GDGiGpEv~~~~~~vl~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~~~ 84 (412)
||||+++|++|||||||||||++++++|++++++|+|+++++|++++++||+++|++++++|+++|++||||+++|.+.+
T Consensus 2 ~~~~~~~i~~i~GDgig~ei~~~~~~vl~~~~~~~~~~~~~~G~~~~~~~g~~lp~etl~~~k~~da~LkGav~tP~~~~ 81 (402)
T 2uxq_A 2 KIQMKTPLVELDGDEMTRVLWPLIKDKLLLPFIDLQTEYYDLGIEERDRTNDQITIDAAEAIKKYGVGVKNATITPNQDR 81 (402)
T ss_dssp CBCCSSCEEEEECCHHHHHHHHHHHHHHTTTTBCCCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCHHH
T ss_pred ceeeecceEEecCCCccHHHHHHHHHHHHhCCCCeEEEEEecCHHHHHhhCCcCCHHHHHHHHhCCEEEECCccCCCccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999998655
Q ss_pred HHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEE--------ecCCccce
Q 015139 85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVI--------QGPGKLKL 156 (412)
Q Consensus 85 ~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vi--------vrenteg~ 156 (412)
+++..+.++|+|+|++|||+||||+|+||++++++|++.++++.|++|+||+|||.|.++|+++ ++++++|.
T Consensus 82 ~~~~~~~~~~~s~~l~LR~~ldlyan~RPv~~~~~~~~~~~~~~divIvRE~teg~Y~g~e~~~~~~g~~~~~~~~~~g~ 161 (402)
T 2uxq_A 82 VEEYGLKEQWKSPNATVRAMLDGTVFRKPIMVKNIKPSVRSWQKPIVVGRHAYGDFYKNAEIFAEAGGKLEIVVTDKNGK 161 (402)
T ss_dssp HHHHTCSSCCCCHHHHHHHHHCCEEEEEECCCTTCCCSBTTCCSCCEEEEECSCGGGGCEEEEETTCEEEEEEEECTTSC
T ss_pred CccccccccccCchHHHHHHhCCeEEEEEEEcCCCCCCCCCCCCCeEEEeccCCCcccCcceeeccCCcceeeeeccCCc
Confidence 5555455578999999999999999999998888888777788999999999999999999998 44666676
Q ss_pred eeccCCcccceeeccccCCCceEEEeeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcC
Q 015139 157 VFEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWK 236 (412)
Q Consensus 157 y~g~~~~~~~~~~~~~~~~~~~a~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp 236 (412)
|.+.+ +++++. ++++...++|++++|||+|+||+||++|++|||+|||+|||+.|+|+|+++|+||++++||
T Consensus 162 ~~~~~-------~~~~~~-~~~~~~~~~T~~~~eRiar~AFe~A~~r~~kVt~v~KaNVlk~sdglf~~~~~eva~~eyp 233 (402)
T 2uxq_A 162 ETRQT-------IMEVDE-PAIVQGIHNTVASIGHFARACFEYSLDQKIDCWFATKDTISKQYDQRFKIIFEEIFAQEYK 233 (402)
T ss_dssp EEEEE-------EEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTH
T ss_pred ccccc-------ccccCC-CceEEEEEECHHHHHHHHHHHHHHHHHcCCcEEEEECCCcchhhHHHHHHHHHHHHHHhCC
Confidence 65432 112221 3445557799999999999999999999889999999999999999999999999437999
Q ss_pred CccccCCeEEceeeHHHHHHHHHhCCCccEEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccc
Q 015139 237 SKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHY 316 (412)
Q Consensus 237 ~~~~~~~I~~~~~~VDa~~~~lv~~P~~FVivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~ 316 (412)
++|.+.+|+++|+|||+||||||++|++|||||+|||||||||++|+++|||||+||+|+|+++ .+||||+|||||+++
T Consensus 234 d~~~~~~I~~~~~~vD~~~mqlv~~P~~fVivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~-~~lfEpvHGSAPdi~ 312 (402)
T 2uxq_A 234 EKFAAAGIEYFYTLIDDVVARMMKTEGGMLWACKNYDGDVMSDMVASAFGSLAMMSSVLVSPYG-YFEYEAAHGTVQRHY 312 (402)
T ss_dssp HHHHHHTCCEEEEEHHHHHHHHTTCCCCSEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTS-CEEEECCSCCCHHHH
T ss_pred CcccCCeEEEEEEEHHHHHHHHccCCCceEEEEcccchHHHHHHHHHhcCCccccccceecCCC-CeEEeCCCCChhhhh
Confidence 6666666999999999999999999999999999999999999999999999999999999986 489999999999777
Q ss_pred cccccCCCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCCCCCcccccCHHHH
Q 015139 317 RVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEF 396 (412)
Q Consensus 317 ~~diaGk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~ 396 (412)
+++|||||++|||+|+|||++|||+|||+.+.++++.++|++|++||.+|+++|++|+|||...+|. +.+.+||+||
T Consensus 313 ~~~~aGk~~~ANP~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~G~~T~Dlgg~~~g~---~~~~~~T~e~ 389 (402)
T 2uxq_A 313 YQHLKGERTSTNPVALIYAWTGALRKRGELDGTPDLCAFCDSLEAITIECIESGYMTGDLARICEPA---AIKVLDSIEF 389 (402)
T ss_dssp HHHHTTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTEECHHHHTTCSSC---CSEECCHHHH
T ss_pred hhhhcCCCcccCcHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHHcCCcCccccccCCCC---CCCCcCHHHH
Confidence 7777999944999999999999999999766666678899999999999999999999998321121 1125899999
Q ss_pred HHHHHHHHHH
Q 015139 397 IDAVADDLRA 406 (412)
Q Consensus 397 ~daV~~~l~~ 406 (412)
+|+|+++|++
T Consensus 390 ~daI~~~l~~ 399 (402)
T 2uxq_A 390 IDELGKRLQQ 399 (402)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999999953
No 6
>4aoy_A Isocitrate dehydrogenase [NADP]; oxidoreductase, temperature adaptation, thermophilic, psychr NADP+ selectivity, domain movements; 2.35A {Clostridium thermocellum} PDB: 4aou_A
Probab=100.00 E-value=2.1e-109 Score=842.79 Aligned_cols=399 Identities=54% Similarity=0.904 Sum_probs=323.8
Q ss_pred ccceeecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCc
Q 015139 3 FQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (412)
Q Consensus 3 ~~~~~m~~~I~vi~GDGiGpEv~~~~~~vl~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~ 82 (412)
|.||||+++|++|||||||||+|+.++++++.++++|+|+++++|++++++||+++|++++++|++++|+||||++||.+
T Consensus 1 ~~~i~~~~~i~~i~GDei~~e~~~~i~~v~~~~~~~i~~~~~d~G~~~~~~tg~~lp~etl~aik~~~v~lkGa~~tP~~ 80 (402)
T 4aoy_A 1 MSKIKMKVPLVEMDGDEMTRIIWRLIKENLLEPYIELNTEYYDLGLENRDKTEDQVTIDAARAIQKYGVGVKCATITPNA 80 (402)
T ss_dssp -CCEECSSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHHTTHHHHHHHHHHHHHSEEEECCCCCCCH
T ss_pred CCcccccCcEEEECCCchHHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECcccCCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred hhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeec-cC
Q 015139 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFE-GK 161 (412)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g-~~ 161 (412)
.+++++.|.++|+|+|++|||.||||+|+||+.++++|++.++|..|++|+||||||.|.++++.+..+....+.|. ..
T Consensus 81 ~~~~~~~l~~~~~s~n~~LR~~Ldlyan~rPv~~~~i~~~~~~~~~DivIvREnteg~Y~g~e~~~~~~~~~~~~~~~~~ 160 (402)
T 4aoy_A 81 QRVEEYNLKKMWKSPNGTIRAILDGTVFRAPIVVNSIKPFVKGWKKPISIARHAYGDVYKNVEYYVPSAGKAELVFTSEN 160 (402)
T ss_dssp HHHHHTTCSSCCCCHHHHHHHHHTCEEEEEECCCTTSCCSBTTCCBCCEEEEC------CCEEEEECSCEEEEEEEEETT
T ss_pred cccccccccccccChHHHHHHHhCCeEEeeeEeccCCCCcCCCCCCCEEEEEeccCCeecCceeeccCccceeeeeeccC
Confidence 66667677778999999999999999999999777888777777788888888888888888876643333222221 11
Q ss_pred CcccceeeccccCCCceEEEeeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCcccc
Q 015139 162 DEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEA 241 (412)
Q Consensus 162 ~~~~~~~~~~~~~~~~~a~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~ 241 (412)
+.+..+++.++.+ .+++...++|+++++||+|+||+||++|+++||+|||+|||+.|||+|+++|+||++++||++|++
T Consensus 161 g~~~~~~~~~~~~-~gv~~~~~~t~~~~eRiar~AF~~A~~~~~~vt~v~KaNilk~tdglf~~~~~eva~~eyp~~~~~ 239 (402)
T 4aoy_A 161 GEVSRQTIHEFDG-PGVIMGMHNTDKSIRSFARACFNYALDMNQDLWFSTKDTISKTYDHRFKDIFQEIYENEYKEKFEA 239 (402)
T ss_dssp SCEEEEEEEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred CcccccccccccC-CeeEEEEEecHHHHHHHHHHHHHHHHHcCCcEEEEECCccchhhhhHHHHHHHHHHHHhCcccccC
Confidence 1111122223322 345555788999999999999999999999999999999999999999999999964499999999
Q ss_pred CCeEEceeeHHHHHHHHHhCCCccEEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEcccccccccccccccc
Q 015139 242 AGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQK 321 (412)
Q Consensus 242 ~~I~~~~~~VDa~~~~lv~~P~~FVivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~dia 321 (412)
++|+++|++||+|+||||++|++|||||+|||||||||++|+++|||||+||+|+|+++ .++|||+|||||+||+++||
T Consensus 240 ~~i~~~~~~vD~~~~~lv~~P~~fVivt~Nl~GDIlSD~~A~l~GslGl~psanig~~~-~~~fEp~HGSApd~~~~~ia 318 (402)
T 4aoy_A 240 KNLQYFYTLIDDAVARIIRSEGGMVWACKNYDGDVMSDMVASAFGSLAMMTSVLVSPDG-KYEFEAAHGTVTRHYYKHLK 318 (402)
T ss_dssp TTCCEEEEEHHHHHHHHHTSCBCSEEECCC-CHHHHHHHHHHHHSCTTSEEEEEECTTC-CEEEEC--------------
T ss_pred CCeEEEEEEHHHHHHHHhhCCCCcEEEECCcchHHHHHHHHHhcCchhhccccccCCCC-ceEEeeccCCccccchhhcc
Confidence 99999999999999999999999999999999999999999999999999999999876 59999999999999999999
Q ss_pred CCCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCCCCCcccccCHHHHHHHHH
Q 015139 322 GGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVA 401 (412)
Q Consensus 322 Gk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~ 401 (412)
|||++|||+|+|||++|||+|+|++++++.+.++|++|++||.+|+++|++|+|||...+| ...+.++|+||+|+|+
T Consensus 319 Gk~~~aNP~A~Ils~a~mL~~~g~~~~~~~l~~~A~~ie~Av~~~l~~g~~T~Dlgg~~~~---~~~~~~~T~ef~~av~ 395 (402)
T 4aoy_A 319 GEETSTNSMATIFAWTGALKKRGELDGIKELVDFATKLEQASVQTIENGVMTKDLASLSEV---PEKKIVNTEDFLKEIR 395 (402)
T ss_dssp ---CCCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTEEEHHHHTTCCC---SCCEEECHHHHHHHHH
T ss_pred CCCcCcCcHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHcCCCCccccccccc---CCCCCcCHHHHHHHHH
Confidence 9997799999999999999999988777777899999999999999999999999821100 0113469999999999
Q ss_pred HHHHH
Q 015139 402 DDLRA 406 (412)
Q Consensus 402 ~~l~~ 406 (412)
++|++
T Consensus 396 ~~l~~ 400 (402)
T 4aoy_A 396 KTFEG 400 (402)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 99853
No 7
>1x0l_A Homoisocitrate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, lysine biosyn; 1.85A {Thermus thermophilus} PDB: 3asj_A* 3ah3_A
Probab=100.00 E-value=1.8e-106 Score=803.69 Aligned_cols=327 Identities=21% Similarity=0.229 Sum_probs=305.0
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCchhHHHHH
Q 015139 10 NPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFV 89 (412)
Q Consensus 10 ~~I~vi~GDGiGpEv~~~~~~vl~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~~~~~e~~ 89 (412)
++|++|||||||||||+++++||.+.+++|+|+++++|+++++++|+++|++++++|+++|++||||+++|....
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~vl~a~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~l~Gav~~P~~~~----- 76 (333)
T 1x0l_A 2 YRICLIEGDGIGHEVIPAARRVLEATGLPLEFVEAEAGWETFERRGTSVPEETVEKILSCHATLFGAATSPTRKV----- 76 (333)
T ss_dssp EEEEEEEESTTHHHHHHHHHHHHHTTTCCEEEEEECCSHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCCSSCC-----
T ss_pred cEEEEECCCCcCHHHHHHHHHHHHHcCCCeEEEEEecchHHHHhhCCcCcHHHHHHHHHCCEEEECCccCCCCCC-----
Confidence 689999999999999999999999989999999999999999999999999999999999999999999996431
Q ss_pred hhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCCcccceee
Q 015139 90 LKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKTELEV 169 (412)
Q Consensus 90 l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~~~~~~~~ 169 (412)
.+++|+|++|||+||||+|+||++. +| + + +| +.++|++|+||||||+|+|.++.
T Consensus 77 --~~~~s~~l~lR~~ldlyan~RP~~~--~p-~-~---s~-----------~~~vD~vivREnteg~Y~g~~~~------ 130 (333)
T 1x0l_A 77 --PGFFGAIRYLRRRLDLYANVRPAKS--RP-V-P---GS-----------RPGVDLVIVRENTEGLYVEQERR------ 130 (333)
T ss_dssp --TTCCCHHHHHHHHTTCCEEEEEEEC--CS-S-T---TC-----------CSSCEEEEEEECGGGTCCCCEEE------
T ss_pred --cCccChhHHHHHHcCCEEEEEEEee--cc-C-C---CC-----------CCCCCEEEEecCccceecccccc------
Confidence 2688999999999999999999864 45 3 2 33 35899999999999999986531
Q ss_pred ccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcC-CCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCccccCCeEEc
Q 015139 170 YNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYE 247 (412)
Q Consensus 170 ~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~~~I~~~ 247 (412)
+ ++++++ ++|||+++|||+|+||+||++| ++|||+|||+|||+.|||||+++|+|| +++|| +|+++
T Consensus 131 ----~-~~~a~~~~~~T~~~~eRiar~AF~~A~~r~rkkvt~v~KaNvlk~t~glf~~~~~ev-a~eyp------~I~~~ 198 (333)
T 1x0l_A 131 ----Y-LDVAIADAVISKKASERIGRAALRIAEGRPRKTLHIAHKANVLPLTQGLFLDTVKEV-AKDFP------LVNVQ 198 (333)
T ss_dssp ----E-TTEEEEEEEEEHHHHHHHHHHHHHHHHTSTTCEEEEEECTTTCTTHHHHHHHHHHHH-HTTCT------TSEEE
T ss_pred ----C-CCeEEEEEEecHHHHHHHHHHHHHHHHhcCCCeEEEEecCccchhhhHHHHHHHHHH-HHHCC------CceEE
Confidence 1 478999 9999999999999999999999 567999999999999999999999999 58999 99999
Q ss_pred eeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccccCCCcc
Q 015139 248 HRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETS 326 (412)
Q Consensus 248 ~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ 326 (412)
|+|||+|+||||++|++| ||||+|||||||||++|+++||+||+||+|+|+++ +||||+||||| ||||||+
T Consensus 199 ~~~vD~~~m~lv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~psanig~~~--a~fEp~HGSAP-----diaGk~i- 270 (333)
T 1x0l_A 199 DIIVDNCAMQLVMRPERFDVIVTTNLLGDILSDLAAGLVGGLGLAPSGNIGDTT--AVFEPVHGSAP-----DIAGKGI- 270 (333)
T ss_dssp EEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCSTTCEEEEECSSC--EEEEESSCCCG-----GGTTSSC-
T ss_pred EEEHHHHHHHHhhCcccceEEEEcCccchhHhHHHHhhcCCcccceeeEECCCc--eEEeCCCCChh-----hhcCCCC-
Confidence 999999999999999999 99999999999999999999999999999999885 89999999999 9999999
Q ss_pred cChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCCCCCcccccCHHHHHHHHHHHHH
Q 015139 327 TNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLR 405 (412)
Q Consensus 327 ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l~ 405 (412)
|||+|+|||++|||+||| +.++|++|++||.+++++|++|+||| | .+||+||+|+|+++|+
T Consensus 271 ANP~A~IlS~ammL~~lg-------~~~~A~~Ie~Av~~~l~~g~~T~Dlg----G-------~~~T~e~~daV~~~l~ 331 (333)
T 1x0l_A 271 ANPTAAILSAAMMLDYLG-------EKEAAKRVEKAVDLVLERGPRTPDLG----G-------DATTEAFTEAVVEALK 331 (333)
T ss_dssp CCCHHHHHHHHHHHHHHT-------CHHHHHHHHHHHHHHHHHSCCCGGGT----C-------CCCHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHhcC-------cHHHHHHHHHHHHHHHHcCCccCccC----C-------CCCHHHHHHHHHHHHh
Confidence 999999999999999987 68999999999999999999999998 7 6899999999999995
No 8
>3flk_A Tartrate dehydrogenase/decarboxylase; cytoplasm, lyase, magnesium, manganese, NAD, oxidoreductase; HET: NAD; 2.00A {Pseudomonas putida} PDB: 3fmx_X*
Probab=100.00 E-value=1.7e-106 Score=812.29 Aligned_cols=349 Identities=17% Similarity=0.149 Sum_probs=310.5
Q ss_pred ecccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCc-hhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCc
Q 015139 8 VANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGL-PNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (412)
Q Consensus 8 m~~~I~vi~GDGiGpEv~~~~~~vl~~~----~~~i~~~~~~~G~-~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~ 82 (412)
|+++|++|||||||||||+++++||.+. +++|+|+++++|+ ++++++|+++|++++++|+++|++||||+++|.+
T Consensus 4 ~~~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~~g~~lp~~tl~~~~~~da~L~Gavg~P~~ 83 (364)
T 3flk_A 4 HSFRIAAIPGDGIGLEVLPEGIRVLEAAALKHGLALEFDTFEWASCDYYLQHGKMMPDDWAEQLKQYDAIYFGAVGWPDK 83 (364)
T ss_dssp -CEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCSSHHHHHHHSSSSCTTHHHHHTTSSEEEEEECCBTTT
T ss_pred CceEEEEECCCcccHHHHHHHHHHHHHHHHhcCCCeEEEEEeCCcHHHHhccCCcCCHHHHHHHHHCCEEEECCccCccc
Confidence 5689999999999999999999998653 7999999999999 9999999999999999999999999999999963
Q ss_pred hhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCC
Q 015139 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKD 162 (412)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~ 162 (412)
.+ . ...++|+|++|||+||||+|+||++. +|+ +.+|++ +....++|+||+||||||+|+|.++
T Consensus 84 ~~--~---~~~~~s~~l~LR~~ldlyanvRP~~~--~pg----~~splk------~~~~~~vD~vivREnteG~Y~g~~~ 146 (364)
T 3flk_A 84 VP--D---HISLWGSLLKFRREFDQYVNIRPVRL--FPG----VPCALA------NRKVGDIDFVVVRENTEGEYSSLGG 146 (364)
T ss_dssp BC--H---HHHHHTTHHHHHHHTTCCEEEEEEEC--CTT----CCCSBT------TCCTTSSEEEEEEECSSBTCCCCEE
T ss_pred CC--C---CcCcccchHHHHHHhCCeEEEEEEec--cCC----cccccc------cccCCCCCEEEEeeCCCceecCcCc
Confidence 11 0 00136889999999999999999854 344 346654 1235799999999999999999764
Q ss_pred cccceeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCCC-CEEEEeCCCccccccHHHHHHHHHHHHhhcCCccc
Q 015139 163 EKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFE 240 (412)
Q Consensus 163 ~~~~~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~ 240 (412)
.. ....+ ++++++ ++|||+++|||+|+||+||++|++ |||+|||+|||+.|+||||++|+|| +++||
T Consensus 147 ~~-----~~~~~-~~~a~~~~~~T~~~~eRIar~AFe~A~~r~~kkVt~v~KaNvlk~s~glf~~~~~ev-a~eyp---- 215 (364)
T 3flk_A 147 IM-----FENTE-NEIVIQESIFTRRGVDRILKYAFDLAEKRERKHVTSATKSNGMAISMPYWDKRTEAM-AAHYP---- 215 (364)
T ss_dssp EE-----STTST-TCEEEEEEEEEHHHHHHHHHHHHHHHHHSSSCEEEEEECTTTSTTHHHHHHHHHHHH-HTTCT----
T ss_pred ee-----ccCCC-CCEEEEEEEECHHHHHHHHHHHHHHHHhcCCCeEEEEECcchhhhHHHHHHHHHHHH-HHHCC----
Confidence 31 11112 578999 999999999999999999999976 5999999999999999999999999 68999
Q ss_pred cCCeEEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCc-eEEEccccccccccccc
Q 015139 241 AAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGK-TIEAEAAHGTVTRHYRV 318 (412)
Q Consensus 241 ~~~I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~-~a~FEp~HGSAp~~~~~ 318 (412)
+|+++|+|||+||||||++|++| ||||+|||||||||++|+++|||||+||+|+|+++. ++||||+|||||
T Consensus 216 --dv~~~~~~vD~~am~lv~~P~~FDVivt~NlfGDILSD~aa~l~GslGl~pSanig~~~~~~a~fEp~HGSAP----- 288 (364)
T 3flk_A 216 --HVSWDKQHIDILCARFVLQPERFDVVVASNLFGDILSDLGPACAGTIGIAPSANLNPERNFPSLFEPVHGSAP----- 288 (364)
T ss_dssp --TCEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCSTTCEEEEECTTCSSCEEEEESSCCCT-----
T ss_pred --CceEEeeEHHHHHHHHHhCcccCcEEEecccchHHHHHHHHHhcCCcccccccccCCCCCcceEEecCCCCch-----
Confidence 99999999999999999999999 999999999999999999999999999999998752 499999999999
Q ss_pred cccCCCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCCCCCcccccCHHHHHH
Q 015139 319 HQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFID 398 (412)
Q Consensus 319 diaGk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~d 398 (412)
||||||+ |||+|+|||++|||+|+|+++ +.+.++|++|++||.+++++|++|+||| | .+||+||+|
T Consensus 289 diAGk~i-ANP~A~IlS~ammL~~lg~~~--~~~~~~A~~Ie~Av~~~l~~G~~T~Dlg----g-------~~~T~e~~~ 354 (364)
T 3flk_A 289 DIFGKNI-ANPIAMIWSGALMLEFLGQGD--ERYQRAHDDMLNAIERVIADGSVTPDMG----G-------TLSTQQVGA 354 (364)
T ss_dssp TTTTSSC-CCCHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHTCCCGGGT----C-------CCCHHHHHH
T ss_pred hhcCCCc-cCcHHHHHHHHHHHHHhCccc--chhHHHHHHHHHHHHHHHHcCCCCcccC----C-------CcCHHHHHH
Confidence 9999999 999999999999999998655 3368999999999999999999999998 7 799999999
Q ss_pred HHHHHHH
Q 015139 399 AVADDLR 405 (412)
Q Consensus 399 aV~~~l~ 405 (412)
+|+++|+
T Consensus 355 aV~~~l~ 361 (364)
T 3flk_A 355 AISDTLA 361 (364)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999996
No 9
>3u1h_A 3-isopropylmalate dehydrogenase; oxidored; 2.80A {Bacillus SP} PDB: 2ayq_A 1v53_A 1v5b_A
Probab=100.00 E-value=2e-106 Score=814.29 Aligned_cols=351 Identities=21% Similarity=0.214 Sum_probs=304.0
Q ss_pred eecccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCc
Q 015139 7 KVANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (412)
Q Consensus 7 ~m~~~I~vi~GDGiGpEv~~~~~~vl~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~ 82 (412)
+|+++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+
T Consensus 21 ~M~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~g~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~daiL~Gavg~P~~ 100 (390)
T 3u1h_A 21 AMKKKIAVLPGDGIGPEVMEAAIEVLKAVAERFGHEFEFEYGLIGGAAIDEAGTPLPEETLDVCRGSDAILLGAVGGPKW 100 (390)
T ss_dssp ---CEEEEEEESTTHHHHHHHHHHHHHHHHHHHSCCCEEEECCCTHHHHHSSSSSSCHHHHHHHHTSSEEEEEECCCSTT
T ss_pred CccceEEEECCCccCHHHHHHHHHHHHHHHHhcCCCeEEEEEEcCHHHHHhhCCcCCHHHHHHHHHCCEEEECCcCCCCc
Confidence 78899999999999999999999998765 89999999999999999999999999999999999999999999975
Q ss_pred hhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCC
Q 015139 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKD 162 (412)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~ 162 (412)
..++. .....|.|++|||+||||+|+||++. +|++.. .+|++-. .+.++|+|||||||||+|+|.++
T Consensus 101 ~~~~~---~~~~~~~ll~LRk~ldLyANvRP~k~--~pg~~~--~splk~~------~~~~vD~vIVREnTeG~Y~g~~~ 167 (390)
T 3u1h_A 101 DQNPS---ELRPEKGLLGIRKGLDLFANLRPVKV--YDSLAD--ASPLKKE------VIEGVDLVIVRELTGGLYFGEPS 167 (390)
T ss_dssp TSSCC---SSSSSCCHHHHHHHTTEEEEEEEEEC--CGGGTT--SSSBCHH------HHSSCEEEEEEECSSBSCC----
T ss_pred CCCCc---ccCccchHHHHHHHhCCeEEEEEeec--cCCccc--cCCcccc------cccCCcEEEEeeCCCCeecCccc
Confidence 31100 00123779999999999999999864 344431 1666411 24699999999999999999765
Q ss_pred cccceeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCcccc
Q 015139 163 EKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEA 241 (412)
Q Consensus 163 ~~~~~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~ 241 (412)
... ..+ .+++++ ++|||+++|||+|+||+||++|++|||+|||+||| .||||||++|+|| +++||
T Consensus 168 ~~~------~~g-~~~a~~~~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNVl-~t~glfr~~~~ev-a~eYP----- 233 (390)
T 3u1h_A 168 ERY------EEG-EEAAVDTLLYTREEIERIIRKAFELALTRKKKVTSVDKANVL-ESSRLWREVAEEV-AKEYP----- 233 (390)
T ss_dssp ---------CTT-CSEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTC-HHHHHHHHHHHHH-HTTCT-----
T ss_pred ccc------CCC-CceEEEEEEecHHHHhHHHHHHHHHHHHcCCceEEEECCccc-ccchHHHHHHHHH-HhHCC-----
Confidence 310 012 467888 99999999999999999999998899999999999 6999999999999 68999
Q ss_pred CCeEEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccc
Q 015139 242 AGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQ 320 (412)
Q Consensus 242 ~~I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~di 320 (412)
+|+++|+|||+||||||++|++| ||||+|||||||||++|+|+||+||+||+|+|+++ ++||||+||||| ||
T Consensus 234 -dV~~~~~~VD~~amqLV~~P~~FDViVt~NlfGDILSD~aA~l~GslGl~pSanig~~~-~a~fEpvHGSAP-----DI 306 (390)
T 3u1h_A 234 -DVELEHMLVDNAAMQLIRNPRQFDVIVTENMFGDILSDEASMITGSLGMLPSASLSTDG-LGLYEPVHGSAP-----DI 306 (390)
T ss_dssp -TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHSCTTTCEEEEEETTS-CEEEEESSCCCT-----TT
T ss_pred -CCeEEeeeHHHHHHHHHhCcccCcEEEecccchHHHHHHHHHhcCchhhcceeeecCCC-CeeEecCCCChh-----hh
Confidence 99999999999999999999999 99999999999999999999999999999999865 699999999999 99
Q ss_pred cCCCcccChhhHHHHHHHHHHh-hcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCCCCCcccccCHHHHHHH
Q 015139 321 KGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDA 399 (412)
Q Consensus 321 aGk~i~ANP~a~IlS~ammL~~-lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~da 399 (412)
||||+ |||+|+|||++|||+| +| +.++|++|++||.+++++|++|+||+. +|+ +.+||+||+|+
T Consensus 307 AGk~i-ANP~A~IlS~amML~~~lg-------~~~~A~~Ie~AV~~vl~~G~~T~Dl~~--gG~-----~~~~T~e~~da 371 (390)
T 3u1h_A 307 AGKGI-ANPLATILSAAMMLRYSFG-------LEEEAKAIEKAVEKVLAEGYRTADIAK--PGG-----KYVSTTEMTDE 371 (390)
T ss_dssp TTSSC-SCTHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHTCCBTTTSC--SSC-----CCBCHHHHHHH
T ss_pred cCCCc-CCcHHHHHHHHHHHHHhCC-------CHHHHHHHHHHHHHHHHcCCcChhhcc--CCC-----CccCHHHHHHH
Confidence 99999 9999999999999999 76 689999999999999999999999931 031 37999999999
Q ss_pred HHHHHHH
Q 015139 400 VADDLRA 406 (412)
Q Consensus 400 V~~~l~~ 406 (412)
|+++|+.
T Consensus 372 V~~~l~~ 378 (390)
T 3u1h_A 372 VKAAVVD 378 (390)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999963
No 10
>3udu_A 3-isopropylmalate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.85A {Campylobacter jejuni} SCOP: c.77.1.1 PDB: 3udo_A
Probab=100.00 E-value=1.3e-106 Score=810.95 Aligned_cols=344 Identities=21% Similarity=0.197 Sum_probs=306.2
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCchhH
Q 015139 10 NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARV 85 (412)
Q Consensus 10 ~~I~vi~GDGiGpEv~~~~~~vl~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~~~~ 85 (412)
++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+..+
T Consensus 7 ~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~da~L~Gavg~P~~~~~ 86 (361)
T 3udu_A 7 YKVAVLAGDGIGPLVMKEALKILTFIAQKYNFSFELNEAKIGGASIDAYGVALSDETLKLCEQSDAILFGSVGGPKWDNL 86 (361)
T ss_dssp EEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCEEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGTTS
T ss_pred eeEEEECCCccCHHHHHHHHHHHHHHHHhcCCCEEEEEEeccHHHHHhhCCcCCHHHHHHHHHCCcEEECCcCCCCcCCC
Confidence 89999999999999999999998653 79999999999999999999999999999999999999999999964311
Q ss_pred HHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCCccc
Q 015139 86 KEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKT 165 (412)
Q Consensus 86 ~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~~~~ 165 (412)
+. -.++++++|++|||+||||+|+||++. +|++.. .+||+-.| .+.++|+|||||||||+|+|.++.
T Consensus 87 ~~--~~~~~~~~~l~LRk~ldLyaNvRP~~~--~pg~~~--~splk~~~-----~~~~vD~vivREnTeG~Y~g~~~~-- 153 (361)
T 3udu_A 87 PI--DQRPERASLLPLRKHFNLFANLRPCKI--YESLTH--ASPLKNEI-----IQKGVDILCVRELTGGIYFGKQDL-- 153 (361)
T ss_dssp CG--GGSHHHHHHHHHHHHHTCCEEEEEEEC--CGGGGG--GSSBCHHH-----HTTCCEEEEEEECSSGGGTSCEEE--
T ss_pred CC--CcCccccchHHHHHHcCCEEEEEEeec--cCCccc--cCCCcccc-----ccCCCcEEEEcccCCCeecCccCC--
Confidence 10 011233448999999999999999854 344321 26664211 157999999999999999986432
Q ss_pred ceeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCccccCCe
Q 015139 166 ELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGI 244 (412)
Q Consensus 166 ~~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~~~I 244 (412)
..+++++ ++|||+++|||+|+||+||++|++|||+|||+|||+ |+||||++|+|| +++|| +|
T Consensus 154 ---------~~~~a~~~~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNvl~-t~glf~~~~~ev-a~eyp------dV 216 (361)
T 3udu_A 154 ---------GKESAYDTEIYTKKEIERIARIAFESARIRKKKVHLIDKANVLA-SSILWREVVANV-AKDYQ------DI 216 (361)
T ss_dssp ---------CSSEEEEEEEEEHHHHHHHHHHHHHHHHHTTSEEEEEECTTTCH-HHHHHHHHHHHH-GGGCT------TS
T ss_pred ---------cCceEEEEEeccHHHHHHHHHHHHHHHHHcCCcEEEEECchhhc-cchHHHHHHHHH-HHHCC------CC
Confidence 1467888 999999999999999999999989999999999996 999999999999 68999 99
Q ss_pred EEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccccCC
Q 015139 245 WYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGG 323 (412)
Q Consensus 245 ~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk 323 (412)
+++|+|||++|||||++|++| ||||+|||||||||++|+|+||+||+||+|+|+++ ++||||+||||| |||||
T Consensus 217 ~~~~~~VD~~am~lv~~P~~FDViVt~NlfGDILSD~aa~l~GslGl~pSanig~~~-~a~fEpvHGSAP-----dIAGk 290 (361)
T 3udu_A 217 NLEYMYVDNAAMQIVKNPSIFDVMLCSNLFGDILSDELAAINGSLGLLSSASLNDKG-FGLYEPAGGSAP-----DIAHL 290 (361)
T ss_dssp EEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHCCGGGCEEEEECTTS-CEEEEESSCCCG-----GGTTS
T ss_pred eEEeeeHHHHHHHHHhCcccCcEEEecchhHHHHHHHHHHhcCchhhcceeeeCCCC-CeeeecCCCChh-----hhcCC
Confidence 999999999999999999999 99999999999999999999999999999999876 699999999999 99999
Q ss_pred CcccChhhHHHHHHHHHHh-hcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCCCCCcccccCHHHHHHHHHH
Q 015139 324 ETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVAD 402 (412)
Q Consensus 324 ~i~ANP~a~IlS~ammL~~-lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~ 402 (412)
|+ |||+|+|||++|||+| +| +.++|++|++||.+|+++|++|+||| |. +.+||+||+|+|++
T Consensus 291 ~i-ANP~A~IlS~amML~~~lg-------~~~~A~~Ie~Av~~~l~~g~~T~Dlg----G~-----~~~~T~e~~~aV~~ 353 (361)
T 3udu_A 291 NI-ANPIAQILSAALMLKYSFK-------EEQAAQDIENAISLALAQGKMTKDLN----AK-----SYLNTDEMGDCILE 353 (361)
T ss_dssp SC-CCCHHHHHHHHHHHHHTSC-------CHHHHHHHHHHHHHHHHTTCCCTTTC----SS-----SCCCHHHHHHHHHH
T ss_pred Cc-cCCHHHHHHHHHHHHHhCC-------CHHHHHHHHHHHHHHHHcCCcCcCCC----CC-----CccCHHHHHHHHHH
Confidence 99 9999999999999999 66 68999999999999999999999998 52 37999999999999
Q ss_pred HHHH
Q 015139 403 DLRA 406 (412)
Q Consensus 403 ~l~~ 406 (412)
+|++
T Consensus 354 ~l~~ 357 (361)
T 3udu_A 354 ILKE 357 (361)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9964
No 11
>2y3z_A 3-isopropylmalate dehydrogenase; oxidoreductase, LEUB, leucine biosynthesis; HET: 2PE; 1.83A {Thermus thermophilus} PDB: 2y40_A 2y41_A* 2y42_A* 1xaa_A 1osi_A 1hex_A 1xab_A 2ztw_A* 1g2u_A 1gc9_A 1osj_A 1ipd_A 1gc8_A 1wal_A 1dpz_A 1dr0_A 1dr8_A 1idm_A 1xac_A 1xad_A
Probab=100.00 E-value=5.4e-106 Score=806.66 Aligned_cols=341 Identities=19% Similarity=0.189 Sum_probs=307.8
Q ss_pred cccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCchh
Q 015139 9 ANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR 84 (412)
Q Consensus 9 ~~~I~vi~GDGiGpEv~~~~~~vl~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~~~ 84 (412)
.++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+..
T Consensus 3 ~~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~l~Gavg~P~~~~ 82 (359)
T 2y3z_A 3 SMKVAVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEPFPEPTRKGVEEAEAVLLGSVGGPKWDG 82 (359)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHHSSEEEECCCCCGGGTT
T ss_pred ccEEEEECCCCcCHHHHHHHHHHHHHHHHhcCCCeEEEEEeccHHHHHhhCCcCCHHHHHHHHHCCEEEEccccCCcccc
Confidence 379999999999999999999998765 7999999999999999999999999999999999999999999997543
Q ss_pred HHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCCcc
Q 015139 85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEK 164 (412)
Q Consensus 85 ~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~~~ 164 (412)
+++ + .++++| |++|||+||||+|+||++. +|++.+ .+|++- +.+.++|+||+||||||+|+|.++.
T Consensus 83 ~~~-~-~~~~~~-~l~LR~~ldlyanvRP~~~--~pgl~~--~splk~------~~~~~iD~vivREnteg~Y~g~e~~- 148 (359)
T 2y3z_A 83 LPR-K-IRPETG-LLSLRKSQDLFANLRPAKV--FPGLER--LSPLKE------EIARGVDVLIVRELTGGIYFGEPRG- 148 (359)
T ss_dssp SCG-G-GCHHHH-HHHHHHHTTEEEEEEEEEC--CTTCGG--GSSSCH------HHHTTCEEEEEEECSCSTTTCSSCE-
T ss_pred CCc-c-cccchh-HHHHHHHhCCEEEEEEeec--cCCCCC--CCCccc------ccCCCceEEEEecCccceEecCCCc-
Confidence 221 1 123456 8999999999999999864 455432 256641 1467899999999999999997542
Q ss_pred cceeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCccccCC
Q 015139 165 TELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAG 243 (412)
Q Consensus 165 ~~~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~~~ 243 (412)
.+ .+++++ ++|||+++|||+|+||+||++|++|||+|||+|||+ ++|||+++|+|| +++|| +
T Consensus 149 --------~~-~~~a~~~~~~T~~~~eRIar~AFe~A~~rrkkVt~v~KaNvlk-~~~lf~~~~~ev-a~eyp------d 211 (359)
T 2y3z_A 149 --------MS-EAEAWNTERYSKPEVERVARVAFEAARKRRKHVVSVDKANVLE-VGEFWRKTVEEV-GRGYP------D 211 (359)
T ss_dssp --------EC-SSCEECCCCCCHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHH-HTTCT------T
T ss_pred --------CC-CceEEEEEEEcHHHHHHHHHHHHHHHHHcCCeEEEEECCcccc-ccHHHHHHHHHH-HHHCC------c
Confidence 12 468889 999999999999999999999988899999999999 999999999999 59999 9
Q ss_pred eEEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccccC
Q 015139 244 IWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKG 322 (412)
Q Consensus 244 I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~diaG 322 (412)
|+++|+|||+||||||++|++| ||||+|||||||||++|+++|||||+||+|+|+++ +||||+||||| ||||
T Consensus 212 I~~~~~~VD~~~mqlv~~P~~FDVivt~NlfGDILSD~aa~l~GslGl~pSanig~~~--~~fEpvHGSAP-----diAG 284 (359)
T 2y3z_A 212 VALEHQYVDAMAMHLVRSPARFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLGRGT--PVFEPVHGSAP-----DIAG 284 (359)
T ss_dssp SEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHTTTSCGGGCEEEEEESSC--CEEEESSCCCG-----GGTT
T ss_pred EEEEeeEHHHHHHHHhhCcccccEEEEcCcchHHHHHHHHHhcCcccccceeEeCCCC--ceeecCCCChh-----hhCC
Confidence 9999999999999999999999 99999999999999999999999999999999986 69999999999 9999
Q ss_pred CCcccChhhHHHHHHHHHHh-hcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCCCCCcccccCHHHHHHHHH
Q 015139 323 GETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVA 401 (412)
Q Consensus 323 k~i~ANP~a~IlS~ammL~~-lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~ 401 (412)
||+ |||+|+|||++|||+| || +.++|++|++||.+++++| +|+||| | ++||+||+|+|+
T Consensus 285 k~i-ANP~A~IlS~ammL~~slg-------~~~~A~~Ie~Av~~~l~~g-~T~Dlg----g-------~~~T~e~~daV~ 344 (359)
T 2y3z_A 285 KGI-ANPTAAILSAAMMLEHAFG-------LVELARKVEDAVAKALLET-PPPDLG----G-------SAGTEAFTATVL 344 (359)
T ss_dssp SSC-SCTHHHHHHHHHHHHHTTC-------CHHHHHHHHHHHHHHHHHS-CCGGGT----C-------CCCHHHHHHHHH
T ss_pred CCC-cCCHHHHHHHHHHHHHhcC-------ChHHHHHHHHHHHHHHHcC-CCCccC----C-------CCCHHHHHHHHH
Confidence 999 9999999999999999 77 6899999999999999999 999998 7 689999999999
Q ss_pred HHHHHH
Q 015139 402 DDLRAR 407 (412)
Q Consensus 402 ~~l~~~ 407 (412)
++|++.
T Consensus 345 ~~l~~~ 350 (359)
T 2y3z_A 345 RHLAAA 350 (359)
T ss_dssp HHHHHH
T ss_pred HHHhhh
Confidence 999754
No 12
>3ty4_A Probable homoisocitrate dehydrogenase; B-hydroxyacid oxidative decarboxylase, amino-acid biosynthes lysine biosynthesis; 1.55A {Schizosaccharomyces pombe} SCOP: c.77.1.0 PDB: 3ty3_A
Probab=100.00 E-value=3.9e-105 Score=801.54 Aligned_cols=333 Identities=20% Similarity=0.218 Sum_probs=303.1
Q ss_pred cccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHc-CCeeEecccCCCCch
Q 015139 9 ANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLK-YNVAIKCATITPDEA 83 (412)
Q Consensus 9 ~~~I~vi~GDGiGpEv~~~~~~vl~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~-~~v~lkg~~~~p~~~ 83 (412)
.++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|++ +|++||||+++|.+.
T Consensus 10 ~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~~da~L~Gavg~P~~~ 89 (366)
T 3ty4_A 10 RIVLGLIPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHK 89 (366)
T ss_dssp EEEEEEEEESTTHHHHHHHHHHHHHTCCGGGCCEEEEEECCCSHHHHHHHSCSSCHHHHHHHHHHCSEEEEEECCCCSSC
T ss_pred ceEEEEECCCccCHHHHHHHHHHHHHHHHhcCCceEEEEecchHHHHHhhCCCCCHHHHHHHHHhCCEEEECCccCCCCC
Confidence 489999999999999999999998764 789999999999999999999999999999999 699999999999754
Q ss_pred hHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCCc
Q 015139 84 RVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDE 163 (412)
Q Consensus 84 ~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~~ 163 (412)
. .+++|+|++|||+||||+|+||++. +|++. .+++|+|||||||||+|+|.++.
T Consensus 90 ~-------~~~~s~~l~LRk~ldlyaNvRP~~~--~~g~~-----------------~~~vD~vivREnTeG~Y~g~e~~ 143 (366)
T 3ty4_A 90 V-------AGYSSPIVALRKKMGLYANVRPVKS--LDGAK-----------------GKPVDLVIVRENTECLYVKEERM 143 (366)
T ss_dssp C-------TTCCCHHHHHHHHTTCCEEEEEEEC--CTTCS-----------------SSCCEEEEEEECSCBGGGCCEEE
T ss_pred C-------cccccchHHHHHHhCCeEEEEEEec--cCCCC-----------------CCCCcEEEEeeCCCCEeecCcce
Confidence 2 1578999999999999999999853 34321 23699999999999999987642
Q ss_pred ccceeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcC-------------CCCEEEEeCCCccccccHHHHHHHHH
Q 015139 164 KTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-------------KWPLYLSTKNTILKKYDGRFKDIFQE 229 (412)
Q Consensus 164 ~~~~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r-------------~~~Vt~v~KaNvl~~tdglf~~~~~e 229 (412)
. ....+ ++++++ ++|||+++|||+|+||+||++| ++|||+|||+|||+.|+||||++|+|
T Consensus 144 ~-----~~~~~-~~~a~~~~~~Tr~~~eRIar~AFe~A~~r~~~~~~~~~~~~~rkkVt~v~KaNVl~~s~glf~~~~~e 217 (366)
T 3ty4_A 144 V-----QNTPG-KRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRH 217 (366)
T ss_dssp E-----ECCTT-CCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHTTCCCSCSSCEEEEEECTTTCTTHHHHHHHHHHH
T ss_pred e-----ccCCC-CceEEEEEEecHHHHHHHHHHHHHHHHhcCccccccccccCCCCeEEEEECCcchHhHHHHHHHHHHH
Confidence 1 11112 578999 9999999999999999999998 56899999999999999999999999
Q ss_pred HH--HhhcCCccccCCeEEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEc
Q 015139 230 VY--EANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAE 306 (412)
Q Consensus 230 v~--a~~yp~~~~~~~I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FE 306 (412)
|+ +++|| +|+++|+|||+||||||++|++| ||||+|||||||||++|+|+|||||+||+|+|++ ++|||
T Consensus 218 v~~~a~eyp------dV~~~~~~VD~~am~lv~~P~~FDViVt~NlfGDILSD~aa~l~GslGl~pSanig~~--~a~fE 289 (366)
T 3ty4_A 218 AQSLDPSYA------SINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANVGDN--FVMSE 289 (366)
T ss_dssp HGGGCGGGT------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHGGGSCGGGCCCEEECSS--CEEEC
T ss_pred HHHhHhhCC------CceEEeeeHHHHHHHHHhCcccCcEEEECccchHHHHHHHHHhcCchhhhcceeeCCC--ceEEe
Confidence 95 68999 99999999999999999999999 9999999999999999999999999999999976 59999
Q ss_pred cccccccccccccccCCCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcC-CCCccccccccCCCC
Q 015139 307 AAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKM 385 (412)
Q Consensus 307 p~HGSAp~~~~~diaGk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg~~~~G~~~ 385 (412)
|+||||| ||||||+ |||+|+|||++|||+||| +.++|++|++||.+++++| ++|+||| |
T Consensus 290 pvHGSAP-----dIaGk~i-ANP~A~IlS~amML~~lg-------~~~~A~~Ie~Av~~~l~~G~~~T~Dlg----g--- 349 (366)
T 3ty4_A 290 PVHGSAP-----DIAGRGI-ANPVATFRSVALMLEFMG-------HQDAAADIYTAVDKVLTEGKVLTPDLG----G--- 349 (366)
T ss_dssp CSSCCCT-----TTTTSSC-CCCHHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHHHHHCSSCCGGGT----S---
T ss_pred cCCCChh-----hcCCCCc-cCcHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHcCCccCcccC----C---
Confidence 9999999 9999999 999999999999999977 6899999999999999999 8999998 7
Q ss_pred CcccccCHHHHHHHHHHHHH
Q 015139 386 TREHYLNTEEFIDAVADDLR 405 (412)
Q Consensus 386 ~~~~~~sT~e~~daV~~~l~ 405 (412)
.+||+||+|+|+++|+
T Consensus 350 ----~~~T~e~~daV~~~l~ 365 (366)
T 3ty4_A 350 ----KSGTNEITDAVLANIH 365 (366)
T ss_dssp ----CCCHHHHHHHHHHHC-
T ss_pred ----CcCHHHHHHHHHHHhh
Confidence 7999999999999874
No 13
>3vmk_A 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase; HET: IPM; 1.48A {Shewanella benthica} PDB: 3vml_A* 3vmj_A* 3vl2_A* 3vkz_A* 3vl4_A* 3vl6_A* 3vl7_A* 3vl3_A*
Probab=100.00 E-value=1.7e-105 Score=806.27 Aligned_cols=353 Identities=19% Similarity=0.193 Sum_probs=307.2
Q ss_pred cccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCchh
Q 015139 9 ANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR 84 (412)
Q Consensus 9 ~~~I~vi~GDGiGpEv~~~~~~vl~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~~~ 84 (412)
.++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|++||++++++|+++|++||||+++|.+..
T Consensus 13 ~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~g~~~~~~~~~~G~~~~~~~G~~lp~etl~~~~~~da~L~Gavg~P~~~~ 92 (375)
T 3vmk_A 13 SYQIAVLAGDGIGPEVMAEARKVLAAVEKRFDLSIEYSEYDVGGAAIDNHGCPLPEATLKGCEAADAVLFGSVGGPKWEH 92 (375)
T ss_dssp CEEEEEEEESTTHHHHHHHHHHHHHHHHHHTTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGTT
T ss_pred cceEEEECCCcccHHHHHHHHHHHHHHHHhcCCCEEEEEEECCHHHHHhhCCcCCHHHHHHHHHCCeEEECCcCCCCccC
Confidence 589999999999999999999998653 7999999999999999999999999999999999999999999997531
Q ss_pred HHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCCcc
Q 015139 85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEK 164 (412)
Q Consensus 85 ~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~~~ 164 (412)
++ +..++++++|++|||+||||+|+||++. +|++.. .+|++-.+ .+.++|+|||||||||+|+|.++..
T Consensus 93 ~~--~~~~~~~~~~l~LRk~ldLyaNvRP~~~--~pg~~~--~splk~~~-----~~~~vD~vIvREnTeG~Y~g~~~~~ 161 (375)
T 3vmk_A 93 LP--PNDQPERGALLPLRGHFELFCNMRPAKL--HPGLEH--MSPLRSDI-----SEKGFDILCVRELTGGIYFGKPKGR 161 (375)
T ss_dssp SC--STTSHHHHHHHHHHHHTTCCEEEEEEEC--CTTCGG--GSSBCHHH-----HTTCCEEEEEEECSSBTTTCSSCEE
T ss_pred CC--ccccccccchHHHHHHcCCeEEEEEEec--cCCCcc--cCCCCccc-----ccCCCCEEEEeeCCCCEecCCcccc
Confidence 10 0122345568999999999999999854 344321 15654111 1579999999999999999975421
Q ss_pred cceeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCccccCC
Q 015139 165 TELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAG 243 (412)
Q Consensus 165 ~~~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~~~ 243 (412)
. ...+ .+++++ ++|||+++|||+|+||+||++|++|||+|||+|||+ ++||||++|+|| +++|| +
T Consensus 162 ---~--~~~~-~~~a~~~~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNvl~-~~glf~~~~~ev-a~eyp------d 227 (375)
T 3vmk_A 162 ---Q--GEGE-NEEAFDTMRYSRKEIRRIAKIAFESAQGRRKKVTSVDKANVLA-CSVLWREVVEEV-AKDYP------D 227 (375)
T ss_dssp ---E--CCGG-GCEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHH-HTTCT------T
T ss_pred ---c--cCCC-CceEEEEEEEcHHHHHHHHHHHHHHHHHcCCcEEEEECchhhh-hhhHHHHHHHHH-HHHCC------C
Confidence 0 0011 468888 999999999999999999999988999999999998 779999999999 68999 9
Q ss_pred eEEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccccC
Q 015139 244 IWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKG 322 (412)
Q Consensus 244 I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~diaG 322 (412)
|+++|+|||+||||||++|++| ||||+|||||||||++|+|+|||||+||+|+|+++ ++||||+||||| ||||
T Consensus 228 V~~~~~~VD~~am~lv~~P~~FDViVt~NlfGDILSD~aa~l~GslGl~pSanig~~~-~a~fEpvHGSAP-----dIAG 301 (375)
T 3vmk_A 228 VELEHIYIDNATMQLLRRPNEFDVMLCSNLFGDIVSDEIAMLTGSMGLLASISMNSQG-FGMYEPAGGSAP-----DIAG 301 (375)
T ss_dssp SEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTS-CEEEEESSCCCT-----TTTT
T ss_pred ceEeeeeHHHHHHHHHhCcccCcEEEECchhHHHHHHHHHHhcCCccccceeeeCCCC-ceEEecCCCCch-----hccC
Confidence 9999999999999999999999 99999999999999999999999999999999886 599999999999 9999
Q ss_pred CCcccChhhHHHHHHHHHHh-hcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCCCCCcccccCHHHHHHHHH
Q 015139 323 GETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVA 401 (412)
Q Consensus 323 k~i~ANP~a~IlS~ammL~~-lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~ 401 (412)
||+ |||+|+|||++|||+| +| +.++|++|++||.+|+++|++|+||+..+.| .+.++|+||+|+|+
T Consensus 302 k~i-ANP~A~IlS~amML~~~lg-------~~~~A~~Ie~AV~~~l~~G~~T~Dl~g~~~G-----~~~~~T~e~~~aV~ 368 (375)
T 3vmk_A 302 QGI-ANPVAQILSAALLLRHSLK-------LEDAALAIEAAVSKALSDGYLTCELLPASER-----SQAKSTSQMGDYIA 368 (375)
T ss_dssp SSC-SCCHHHHHHHHHHHHHTTC-------CHHHHHHHHHHHHHHHHTTCCCGGGSCGGGG-----GGCCCHHHHHHHHH
T ss_pred CCc-cCcHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHcCCCCchhccCCCC-----CCccCHHHHHHHHH
Confidence 999 9999999999999999 76 6899999999999999999999999411112 13699999999999
Q ss_pred HHHH
Q 015139 402 DDLR 405 (412)
Q Consensus 402 ~~l~ 405 (412)
++|+
T Consensus 369 ~~l~ 372 (375)
T 3vmk_A 369 QAIA 372 (375)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9985
No 14
>3r8w_A 3-isopropylmalate dehydrogenase 2, chloroplastic; dimer, isocitrate and isopropylmalate dehydrogenases family, biosynthesis; 2.25A {Arabidopsis thaliana}
Probab=100.00 E-value=1.3e-105 Score=812.55 Aligned_cols=356 Identities=17% Similarity=0.175 Sum_probs=306.6
Q ss_pred eecccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCc
Q 015139 7 KVANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (412)
Q Consensus 7 ~m~~~I~vi~GDGiGpEv~~~~~~vl~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~ 82 (412)
+|+++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+
T Consensus 40 ~~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~k~~daiL~Gavg~P~~ 119 (405)
T 3r8w_A 40 KKRYTITLLPGDGIGPEVVSIAKNVLQQAGSLEGVEFNFREMPIGGAALDLVGVPLPEETISAAKESDAVLLGAIGGYKW 119 (405)
T ss_dssp -CEEEEEEEEESTTHHHHHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHSSSSCHHHHHHHHHSSEEEEEECCCGGG
T ss_pred CCCeEEEEECCCcccHHHHHHHHHHHHHHHHhcCCceEEEEEEcCHHHHHhhCCcCCHHHHHHHHHCCEEEEccccCCCc
Confidence 46789999999999999999999998654 79999999999999999999999999999999999999999999964
Q ss_pred hhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCC
Q 015139 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKD 162 (412)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~ 162 (412)
..++. .. ...++|++|||+||||+|+||++. +|++.. .+|++- ..+.++|+|||||||||+|+|.++
T Consensus 120 ~~~~~--~~-~p~~~ll~LRk~ldLyaNlRP~k~--~~gl~~--~splk~------~~~~~vD~vIvREnTeG~Y~G~e~ 186 (405)
T 3r8w_A 120 DNNEK--HL-RPEKGLLQIRAALKVFANLRPATV--LPQLVD--ASTLKR------EVAEGVDLMVVRELTGGIYFGEPR 186 (405)
T ss_dssp TTSCG--GG-SHHHHHHHHHHHHTCCEEEEEEEC--CGGGGG--GSSBCH------HHHTTCEEEEEEECSCSTTTCSSC
T ss_pred cCCcc--cc-CcccchHHHHHHhCCeEEEEEeec--cCCccc--cCcccc------ccCCCceEEEEeeCCCCeecCCcc
Confidence 32100 00 112348999999999999999864 344421 266652 136799999999999999999764
Q ss_pred cccceeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCcccc
Q 015139 163 EKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEA 241 (412)
Q Consensus 163 ~~~~~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~ 241 (412)
... . ...+ ++++++ ++|||+++|||+|+||+||++|++|||+|||+|||+ ++|||+++|+|| +++||
T Consensus 187 ~~~---~-~~~~-~~~a~~~~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNVlk-~sglf~~~~~ev-a~eYP----- 254 (405)
T 3r8w_A 187 GIK---T-NENG-EEVGFNTEVYAAHEIDRIARVAFETARKRRGKLCSVDKANVLE-ASILWRKRVTAL-ASEYP----- 254 (405)
T ss_dssp EEE---E-CSSS-CEEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHH-GGGST-----
T ss_pred ccc---c-CCCC-ceEEEEEEEecHHHHHHHHHHHHHHHHHcCCeEEEEECchhhc-cccHHHHHHHHH-HhHCC-----
Confidence 310 0 0012 467888 999999999999999999999989999999999998 559999999999 79999
Q ss_pred CCeEEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccc
Q 015139 242 AGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQ 320 (412)
Q Consensus 242 ~~I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~di 320 (412)
||+++|+|||++|||||++|++| ||||+|||||||||++|+++||+||+||+|+|+++ ++||||+||||| ||
T Consensus 255 -dV~~~~~~VD~~amqLV~~P~~FDViVt~NlfGDILSD~aA~l~GslGl~pSanig~~~-~a~fEpvHGSAP-----DI 327 (405)
T 3r8w_A 255 -DVELSHMYVDNAAMQLVRDPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLSDSG-PGLFEPIHGSAP-----DI 327 (405)
T ss_dssp -TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHSCGGGCEEEEECSSS-CCEEEESSCCCG-----GG
T ss_pred -CCeEEeeeHHHHHHHHHhChhhCcEEeecchhhHHHHHHHHHhcCcccccceeeecCCC-CeEEecCCCChh-----hh
Confidence 99999999999999999999999 99999999999999999999999999999999876 699999999999 99
Q ss_pred cCCCcccChhhHHHHHHHHHHh-hcccCCccchHHHHHHHHHHHHHHHHcCCCCccc--cccccCCCCCcccccCHHHHH
Q 015139 321 KGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDL--ALIIHGSKMTREHYLNTEEFI 397 (412)
Q Consensus 321 aGk~i~ANP~a~IlS~ammL~~-lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dl--g~~~~G~~~~~~~~~sT~e~~ 397 (412)
||||+ |||+|+|||++|||+| +| +.++|++|++||.+++++|++|+|| | |. +.++|+||+
T Consensus 328 AGk~i-ANP~A~IlS~amML~~slg-------~~~~A~~Ie~AV~~~l~~G~~T~Dl~~g----G~-----~~~~T~e~~ 390 (405)
T 3r8w_A 328 AGQDK-ANPLATILSAAMLLKYGLG-------EEKAAKRIEDAVLVALNNGFRTGDIYSA----GT-----KLVGCKEMG 390 (405)
T ss_dssp TTTTC-CCCHHHHHHHHHHHHHTTC-------CTTHHHHHHHHHHHHHHTTEECGGGCCT----TS-----EECCHHHHH
T ss_pred CCCCC-CCcHHHHHHHHHHHHhhCc-------cHHHHHHHHHHHHHHHHcCCcCccccCC----CC-----cccCHHHHH
Confidence 99999 9999999999999999 76 5789999999999999999999999 6 61 239999999
Q ss_pred HHHHHHHHHHhccC
Q 015139 398 DAVADDLRARLSGK 411 (412)
Q Consensus 398 daV~~~l~~~~~~~ 411 (412)
|+|+++|++.+.++
T Consensus 391 ~aV~~~l~~~~~~~ 404 (405)
T 3r8w_A 391 EEVLKSVDSQVPAS 404 (405)
T ss_dssp HHHHHHHC------
T ss_pred HHHHHHHHHHhccc
Confidence 99999998777654
No 15
>3dms_A Isocitrate dehydrogenase [NADP]; struc genomics, seattle structural genomics center for infectious ssgcid, glyoxylate bypass, manganese; 1.65A {Burkholderia pseudomallei} SCOP: c.77.1.1 PDB: 1pb1_A* 1ai3_A* 1ika_A* 1ai2_A* 1p8f_A* 1pb3_A 1sjs_A 3icd_A 3lcb_C* 4aj3_A* 4aja_A* 4icd_A* 5icd_A* 9icd_A* 1bl5_A* 1cw7_A* 1idd_A 1ide_A* 1hj6_A* 7icd_A ...
Probab=100.00 E-value=7.7e-105 Score=814.62 Aligned_cols=352 Identities=18% Similarity=0.181 Sum_probs=305.9
Q ss_pred ecccEEEECCCCchHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhhcCC--CCCHHHHHHHHcCCeeEecccC
Q 015139 8 VANPIVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDD--KVTVESAEATLKYNVAIKCATI 78 (412)
Q Consensus 8 m~~~I~vi~GDGiGpEv~~~~~~vl~~~-------~~~i~~~~~~~G~~~~~~~g~--~lp~~~~dai~~~~v~lkg~~~ 78 (412)
++++|++|||||||||||+++++||.++ +++|+|+++++|++++++||+ +||++++++|+++|++||||++
T Consensus 35 ~~~~I~vipGDGIGpEV~~~a~~Vl~aa~~~~~~~~~~i~~~~~~~G~~a~~~~G~~~~lp~etl~~~k~~da~l~G~~~ 114 (427)
T 3dms_A 35 DQPIIPYIEGDGTGFDITPVMIKVVDAAVEKAYGGKKKIHWMEIYAGEKATKVYGPDVWLPEETLQVLKEYVVSIKGPLT 114 (427)
T ss_dssp SSBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEEECCTHHHHHHHCTTCSSCHHHHHHHHHTCEEEECCCC
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCHHHHHhcCCCCCCCHHHHHHHHhcCEEEECCCC
Confidence 3588999999999999999999998753 389999999999999999999 9999999999999999999999
Q ss_pred CCCchhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceee
Q 015139 79 TPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVF 158 (412)
Q Consensus 79 ~p~~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~ 158 (412)
+|.+. +++|+|++|||+||||+|+||+++ +| ++.+|++- ..++|+||+||||||+|+
T Consensus 115 tP~~~---------~~~s~~l~LRk~LdLyaNlRPv~~--~p----g~~splk~--------~~~vDivIvREnTeG~Y~ 171 (427)
T 3dms_A 115 TPVGG---------GIRSLNVALRQELDLYVCLRPIQY--FK----GVPSPVRE--------PEKTNMVIFRENSEDIYA 171 (427)
T ss_dssp CCC-------------CCHHHHHHHHTTCCEEEEEECC--CT----TCCCSSSC--------GGGCCEEEEEECSSGGGG
T ss_pred CCCCc---------ccCChhHHHHHHhCCeEEEEEeec--CC----CCCCCCCC--------CCCceEEEEEECCCCEec
Confidence 99753 578999999999999999999853 33 44566641 358999999999999999
Q ss_pred ccCCcccc---------------eeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCC-CCEEEEeCCCccccccH
Q 015139 159 EGKDEKTE---------------LEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKK-WPLYLSTKNTILKKYDG 221 (412)
Q Consensus 159 g~~~~~~~---------------~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~-~~Vt~v~KaNvl~~tdg 221 (412)
|.++.... .....+ .++++++ ++|||+++|||+|+||+||++|+ +|||+|||+|||+.|||
T Consensus 172 G~e~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~a~~~~~~Tr~~~eRIar~AFe~A~~r~rkkVT~V~KaNVlk~tdg 249 (427)
T 3dms_A 172 GIEWAAESEQAKKVIKFLQEEMGVKKIRF--PQTSGIGIKPVSKEGTERLVRKAIQYAIDNDRKSVTLVHKGNIMKFTEG 249 (427)
T ss_dssp CCEECTTCHHHHHHHHHHHHTSCCCCCSC--GGGCCEECCCCCHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTSTTTHH
T ss_pred CcccccCCccccccccccccccccccccc--CCcceEEEEEecHHHHHHHHHHHHHHHHhcCCCeEEEEECCccchhhhH
Confidence 87532100 000000 1457889 99999999999999999999985 57999999999999999
Q ss_pred HHHHHHHHHHHhhcCCc-------------cccCCeEEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCC
Q 015139 222 RFKDIFQEVYEANWKSK-------------FEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGS 287 (412)
Q Consensus 222 lf~~~~~ev~a~~yp~~-------------~~~~~I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~Gg 287 (412)
|||++|+||++++|||. +.+++|+++|+|||+||||||++|++| ||||+|||||||||++|+++||
T Consensus 250 lfr~~~~eva~~eypdv~~~~~~~~~~~~~~~~~~V~~~~~~VD~~amqlv~~P~~FDViVt~NlfGDILSD~aA~l~Gs 329 (427)
T 3dms_A 250 AFRDAGYALAQKEFGAELIDGGPWMKFKNPKTGNEIVVKDSIADAFLQQILLRPAEYDVIATLNLNGDYISDALAAQVGG 329 (427)
T ss_dssp HHHHHHHHHHHHHHCCEESTTSSCEEEECTTTCCEEEEEEEEHHHHHHHHHHCGGGCCEEEECHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCccccccccccccccccccCceEEEEeeHHHHHHHHhhCcccceEEEEcccccHHHHHHHHHhcCC
Confidence 99999999954479962 345679999999999999999999999 9999999999999999999999
Q ss_pred cccccceeeCCCCceEEEccccccccccccccccCCCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHH
Q 015139 288 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTV 367 (412)
Q Consensus 288 lGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l 367 (412)
|||+||+|+|++ .+||||+||||| ||||||+ |||+|+|||++|||+||| +.++|++|++||.+||
T Consensus 330 lGl~pSanig~~--~a~fEpvHGSAP-----dIAGk~i-ANP~A~IlS~amML~~lg-------~~~~A~~Ie~AV~~vl 394 (427)
T 3dms_A 330 IGIAPGANLSDS--VAMFEATHGTAP-----KYAGKDY-VNPGSEILSAEMMLRHLG-------WTEAADVIISAMEKSI 394 (427)
T ss_dssp TTTCEEEEECSS--CEEEEECSCCCG-----GGTTSSC-SCCHHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHHH
T ss_pred ccccceeeeCCC--cceEEeccCChh-----hhcCCCc-CCcHHHHHHHHHHHHhcC-------CHHHHHHHHHHHHHHH
Confidence 999999999987 499999999999 9999999 999999999999999977 6899999999999999
Q ss_pred HcCCCCccccccccCCCCCcccccCHHHHHHHHHHHH
Q 015139 368 ESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDL 404 (412)
Q Consensus 368 ~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l 404 (412)
++|++|+|||....| .+.+||+||+|+|+++|
T Consensus 395 ~~G~~T~Dlgg~~~g-----~~~~~T~e~~daV~~~l 426 (427)
T 3dms_A 395 KQKRVTYDFARLMEG-----ATQVSCSGFGQVLIENM 426 (427)
T ss_dssp HHTEECHHHHTTSSS-----CEECCHHHHHHHHHHTT
T ss_pred HcCCcchhhccccCC-----CCccCHHHHHHHHHHhh
Confidence 999999999832112 13699999999999876
No 16
>1cnz_A IPMDH, IMDH, protein (3-isopropylmalate dehydrogenase); oxidoreductase, leucine biosynthetic pathway, NAD-dependant enzyme; 1.76A {Salmonella typhimurium} SCOP: c.77.1.1 PDB: 1cm7_A
Probab=100.00 E-value=7.5e-105 Score=800.65 Aligned_cols=348 Identities=18% Similarity=0.147 Sum_probs=307.9
Q ss_pred cccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCchh
Q 015139 9 ANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR 84 (412)
Q Consensus 9 ~~~I~vi~GDGiGpEv~~~~~~vl~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~~~ 84 (412)
.++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+..
T Consensus 4 ~~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~L~Gavg~p~~~~ 83 (363)
T 1cnz_A 4 NYHIAVLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSHYDVGGIAIDNHGHPLPKATVEGCEQADAILFGSVGGPKWEN 83 (363)
T ss_dssp CEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGTT
T ss_pred ccEEEEeCCCCcCHHHHHHHHHHHHHHHHhcCCceEEEEEeCChHHHhhcCCcCcHHHHHHHHHCCEEEEccccCCcccc
Confidence 479999999999999999999998765 7999999999999999999999999999999999999999999996532
Q ss_pred HHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCcc-CCccEEEecCCccceeeccCCc
Q 015139 85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQY-RATDTVIQGPGKLKLVFEGKDE 163 (412)
Q Consensus 85 ~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y-~~id~vivrenteg~y~g~~~~ 163 (412)
++. + .++++|+|++|||+||||+|+||+++ +|++.+ .+|++-. .+ .++|++|+||||||+|+|.++.
T Consensus 84 ~~~-~-~~~e~~~~l~LR~~ldlyanvRP~~~--~pgl~~--~splk~~------~~~~~vDivivREnteg~Y~g~~~~ 151 (363)
T 1cnz_A 84 LPP-E-SQPERGALLPLRKHFKLFSNLRPAKL--YQGLEA--FCPLRAD------IAANGFDILCVRELTGGIYFGQPKG 151 (363)
T ss_dssp SCG-G-GSTTHHHHHHHHHHHTCCEEEEEEEC--CTTCGG--GCSBCHH------HHHHCCEEEEEEECSSGGGTCSSCE
T ss_pred CCc-c-cCcccchHHHHHHHcCCEEEEEEEEe--cCCccC--CCCCccc------ccCCCCCEEEEecccCCeecCCcCc
Confidence 211 1 22456789999999999999999865 355432 2555421 13 5899999999999999997432
Q ss_pred ccceeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCccccC
Q 015139 164 KTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAA 242 (412)
Q Consensus 164 ~~~~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~~ 242 (412)
... ..+ .+++++ ++|||+++|||+|+||+||++|++|||+|||+|||+ +++||+++|+|| +++||
T Consensus 152 ---~~~--~~~-~~~a~~~~~~T~~~~eRiar~AFe~A~~rrkkVt~v~KaNvlk-~~~lf~~~~~ev-a~eyp------ 217 (363)
T 1cnz_A 152 ---REG--SGQ-YEKAFDTEVYHRFEIERIARIAFESARKRRRKVTSIDKANVLQ-SSILWREIVNDV-AKTYP------ 217 (363)
T ss_dssp ---EEC--CGG-GCEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHH-HTTCT------
T ss_pred ---ccc--CCC-CceEEEEEEEcHHHHHHHHHHHHHHHHhcCCeEEEEECCcccc-cchhHHHHHHHH-HHHCC------
Confidence 100 011 467888 999999999999999999999988899999999999 999999999999 59999
Q ss_pred CeEEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEcccccccccccccccc
Q 015139 243 GIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQK 321 (412)
Q Consensus 243 ~I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~dia 321 (412)
+|+++|+|||+||||||++|++| ||||+|||||||||++|+++|||||+||+|+|+++ .+||||+||||| |||
T Consensus 218 dI~~~~~~vD~~~m~lv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig~~~-~a~fEpvHGSAP-----diA 291 (363)
T 1cnz_A 218 DVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG-FGLYEPAGGSAP-----DIA 291 (363)
T ss_dssp TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTS-CEEEEESSCCCG-----GGT
T ss_pred CceEeeeeHHHHHHHHhhCcccceEEEECCcchHHHHHHHHHhcCCCcccccceeCCCC-CeEEEcCCCChh-----hhc
Confidence 99999999999999999999999 99999999999999999999999999999999886 589999999999 999
Q ss_pred CCCcccChhhHHHHHHHHHHh-hcccCCccchHHHHHHHHHHHHHHHHcCCCCccc-cccccCCCCCcccccCHHHHHHH
Q 015139 322 GGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDL-ALIIHGSKMTREHYLNTEEFIDA 399 (412)
Q Consensus 322 Gk~i~ANP~a~IlS~ammL~~-lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dl-g~~~~G~~~~~~~~~sT~e~~da 399 (412)
|||+ |||+|+|||++|||+| || +.++|++|++||.+++++|++|+|| | |. +.++|+||+|+
T Consensus 292 Gk~i-ANP~A~IlS~ammL~~~lg-------~~~~A~~Ie~Av~~~l~~g~~T~Dl~g----G~-----~~~~T~e~~da 354 (363)
T 1cnz_A 292 GKNI-ANPIAQILSLALLLRYSLD-------ANDAATAIEQAINRALEEGVRTGDLAR----GA-----AAVSTDEMGDI 354 (363)
T ss_dssp TTTC-SCCHHHHHHHHHHHHHHSS-------CHHHHHHHHHHHHHHHHTTCCCGGGTT----TT-----TCCCHHHHHHH
T ss_pred CCCc-cCcHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHhcCCcCcccCC----CC-----CCCCHHHHHHH
Confidence 9999 9999999999999999 76 6899999999999999999999999 5 52 13899999999
Q ss_pred HHHHHH
Q 015139 400 VADDLR 405 (412)
Q Consensus 400 V~~~l~ 405 (412)
|+++|+
T Consensus 355 V~~~l~ 360 (363)
T 1cnz_A 355 IARYVA 360 (363)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999995
No 17
>1wpw_A 3-isopropylmalate dehydrogenase; oxidoreductase; 2.80A {Sulfolobus tokodaii} SCOP: c.77.1.1
Probab=100.00 E-value=7.9e-104 Score=785.48 Aligned_cols=327 Identities=20% Similarity=0.211 Sum_probs=302.9
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCchhH
Q 015139 10 NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARV 85 (412)
Q Consensus 10 ~~I~vi~GDGiGpEv~~~~~~vl~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~~~~ 85 (412)
++|++||||||||||++++++||.+. +++|+|+++++|+++++++|+++|++++++|++++++||||+++|.+.
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~t~~~~~~~da~l~Gav~tP~~~-- 79 (336)
T 1wpw_A 2 FTVALIQGDGIGPEIVSKSKRILAKINELYSLPIEYIEVEAGDRALARYGEALPKDSLKIIDKADIILKGPVGESAAD-- 79 (336)
T ss_dssp EEEEEECCSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEECCSHHHHHHSSSSSCHHHHHHHHTCSEEEECCCCTTHHH--
T ss_pred cEEEEECCCCcCHHHHHHHHHHHHHHHHhhCCCeEEEEEecchHHHHhhCCcCCHHHHHHHHHCCEEEECCcCCCCcc--
Confidence 68999999999999999999998766 899999999999999999999999999999999999999999999521
Q ss_pred HHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCCccc
Q 015139 86 KEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKT 165 (412)
Q Consensus 86 ~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~~~~ 165 (412)
+|++|||+||||+|+||++. +|++ .+| +.++|++|+||||||+|+|.++.
T Consensus 80 -----------~~l~lR~~ldlyan~RP~~~--~pg~----~~~-----------~~~~D~vivREnteg~Y~g~~~~-- 129 (336)
T 1wpw_A 80 -----------VVVKLRQIYDMYANIRPAKS--IPGI----DTK-----------YGNVDILIVRENTEDLYKGFEHI-- 129 (336)
T ss_dssp -----------HHHHHHHTTTCCEEEEEEEC--CTTT----CCS-----------CSCCEEEEEEECSSBTTTCCEEE--
T ss_pred -----------hHHHHHHHhCCEEEEEEEec--cCCC----CCC-----------CCCCcEEEEecCccCeEcCCccc--
Confidence 58899999999999999853 3443 333 45899999999999999987532
Q ss_pred ceeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCccccCCe
Q 015139 166 ELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGI 244 (412)
Q Consensus 166 ~~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~~~I 244 (412)
. + ++++++ ++|||+++|||+|+||+||++|++|||+|||+|||+.|||||+++|+||+ ++ +|
T Consensus 130 ---~----~-~~va~~~~~~T~~~~eRiar~AF~~A~~rrkkvt~v~KaNvlk~t~glf~~~~~eva-~~--------~I 192 (336)
T 1wpw_A 130 ---V----S-DGVAVGMKIITRFASERIAKVGLNFALRRRKKVTCVHKANVMRITDGLFAEACRSVL-KG--------KV 192 (336)
T ss_dssp ---E----E-TTEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCTTHHHHHHHHHHHHH-TT--------TS
T ss_pred ---c----C-CCeEEEEEEecHHHHHHHHHHHHHHHHHhCCeEEEEECCcchhhhhHHHHHHHHHHH-Hh--------Cc
Confidence 1 1 578999 99999999999999999999998889999999999999999999999994 54 69
Q ss_pred EEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccccCC
Q 015139 245 WYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGG 323 (412)
Q Consensus 245 ~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk 323 (412)
+++|+|||+|+||||++|++| ||||+|||||||||++|+++||+||+||+|+|+++ +||||+||||| |||||
T Consensus 193 ~~~~~~vD~~~~~lv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig~~~--a~fEp~HGSAp-----diaGk 265 (336)
T 1wpw_A 193 EYSEMYVDAAAANLVRNPQMFDVIVTENVYGDILSDEASQIAGSLGIAPSANIGDKK--ALFEPVHGAAF-----DIAGK 265 (336)
T ss_dssp EEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECSSC--EEEEESSCCCT-----TTTTS
T ss_pred eeEEEeHHHHHHHHhhCcccceEEEEcCcchHHHHHHHHHhcCCccccceEEECCCC--ceEeCCCCCch-----hhCCC
Confidence 999999999999999999999 99999999999999999999999999999999885 89999999999 99999
Q ss_pred CcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcC-CCCccccccccCCCCCcccccCHHHHHHHHHH
Q 015139 324 ETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKMTREHYLNTEEFIDAVAD 402 (412)
Q Consensus 324 ~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~ 402 (412)
|+ |||+|+|||++|||+|||.+++|+++.++|++|++||.+++++| ++|+||| | .+||+||+|+|++
T Consensus 266 ~i-ANP~A~IlS~ammL~~lg~~d~~~~~~~~A~~Ie~Av~~~l~~g~~~T~Dlg----G-------~~~T~e~~dav~~ 333 (336)
T 1wpw_A 266 NI-GNPTAFLLSVSMMYERMYELSNDDRYIKASRALENAIYLVYKERKALTPDVG----G-------NATTDDLINEIYN 333 (336)
T ss_dssp SC-CCTHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHHHHHHHCSSCCGGGT----C-------CCCHHHHHHHHHH
T ss_pred CC-cCcHHHHHHHHHHHHHcCccccccchHHHHHHHHHHHHHHHHcCCccCCccC----C-------CCCHHHHHHHHHH
Confidence 99 99999999999999999988888889999999999999999999 7999998 7 6899999999998
Q ss_pred HH
Q 015139 403 DL 404 (412)
Q Consensus 403 ~l 404 (412)
+|
T Consensus 334 ~l 335 (336)
T 1wpw_A 334 KL 335 (336)
T ss_dssp SC
T ss_pred hh
Confidence 75
No 18
>3blx_B Isocitrate dehydrogenase [NAD] subunit 2; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_B* 3blv_B
Probab=100.00 E-value=2.9e-104 Score=792.88 Aligned_cols=326 Identities=23% Similarity=0.246 Sum_probs=301.0
Q ss_pred cccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCchhHHHH
Q 015139 9 ANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEF 88 (412)
Q Consensus 9 ~~~I~vi~GDGiGpEv~~~~~~vl~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~~~~~e~ 88 (412)
.++|++||||||||||++++++||.+.+++|+|+++++|+++ +++|+++|++++++|++++++||||+++|.+.
T Consensus 21 ~~~I~vipGDGIGpEv~~~~~~Vl~a~~~~i~~~~~~~G~~~-~~~g~~lp~~tl~~~~~~da~l~Gav~~P~~~----- 94 (354)
T 3blx_B 21 KYTVSFIEGDGIGPEISKSVKKIFSAANVPIEWESCDVSPIF-VNGLTTIPDPAVQSITKNLVALKGPLATPIGK----- 94 (354)
T ss_dssp CEECBCCCCSTTHHHHHHHHHHHHHTTTCSEECCCCCCCCEE-ETTEEECCHHHHHHHHHHSEEEECCCCCC--------
T ss_pred ceEEEEECCCCcCHHHHHHHHHHHHHcCCCeEEEEEEechhh-hhhCCCCCHHHHHHHHHCCEEEECCccCCCCc-----
Confidence 479999999999999999999999988999999999999999 99999999999999999999999999999643
Q ss_pred HhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCCccccee
Q 015139 89 VLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKTELE 168 (412)
Q Consensus 89 ~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~~~~~~~ 168 (412)
+++|+|++|||+||||+|+||++. +|++ .+| +.++|++|+||||||+|+|.++.
T Consensus 95 ----~~~s~~l~lR~~ldlyan~RP~~~--~pg~----~s~-----------~~~vD~vivREnteg~Y~g~e~~----- 148 (354)
T 3blx_B 95 ----GHRSLNLTLRKTFGLFANVRPAKS--IEGF----KTT-----------YENVDLVLIRENTEGEYSGIEHI----- 148 (354)
T ss_dssp -----CCCHHHHHHHHHTEEEEEEEEEC--CTTC----CCS-----------SCSCEEEEEEECSSEEEEEEEEE-----
T ss_pred ----cccCchHHHHHHcCCEEEEEEecc--cCCC----CCC-----------CCCccEEEEecCcCCcccCCccc-----
Confidence 578999999999999999999863 3443 344 35899999999999999987532
Q ss_pred eccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcC-CCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCccccCCeEE
Q 015139 169 VYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWY 246 (412)
Q Consensus 169 ~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~~~I~~ 246 (412)
. .++++++ ++|||+++|||+|+||+||++| ++|||+|||+|||+.|||||+++|+|| +++|| +|++
T Consensus 149 ~-----~~~~a~~~~~~T~~~~eRiar~AFe~A~~r~rkkVt~v~KaNvlk~sdglf~~~~~ev-a~eyp------dI~~ 216 (354)
T 3blx_B 149 V-----CPGVVQSIKLITRDASERVIRYAFEYARAIGRPRVIVVHKSTIQRLADGLFVNVAKEL-SKEYP------DLTL 216 (354)
T ss_dssp C-----STTEEEEEEEEEHHHHHHHHHHHHHHHHHTTCSEEEEEESCTTTCHHHHHHHHHHHHH-GGGCT------TSEE
T ss_pred c-----cCCEEEEEEEEcHHHHHHHHHHHHHHHHhcCCCeEEEEECCcchHhHHHHHHHHHHHH-HHHCC------CceE
Confidence 1 1478998 9999999999999999999999 567999999999999999999999999 68999 9999
Q ss_pred ceeeHHHHHHHHHhCCCcc---EEEecCcccccccchhhhh-cCCcccccceeeCCCCceEEEccccccccccccccccC
Q 015139 247 EHRLIDDMVAYALKSEGGY---VWACKNYDGDVQSDFLAQG-FGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKG 322 (412)
Q Consensus 247 ~~~~VDa~~~~lv~~P~~F---Vivt~NlfGDILSDlaa~l-~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~diaG 322 (412)
+|+|||+|+||||++|++| ||||+|||||||||++|++ +|||||+||+|+|+++ +||||+||||| ||||
T Consensus 217 ~~~~vD~~~m~lv~~P~~FD~~Vivt~NlfGDIlSD~aa~l~~GslGl~pSanig~~~--a~fEp~HGSAP-----diAG 289 (354)
T 3blx_B 217 ETELIDNSVLKVVTNPSAYTDAVSVCPNLYGDILSDLNSGLSAGSLGLTPSANIGHKI--SIFEAVHGSAP-----DIAG 289 (354)
T ss_dssp EEEEHHHHHHHHHHCGGGGTTEEEEECHHHHHHHHHHHHHHHTSSGGGCEEEEEESSC--EEEEECSCCCG-----GGTT
T ss_pred EEEEHHHHHHHHhhChhhCCceEEEecCcccchhHHHHHhhccCCccccceeEECCCc--eEEecCCCChh-----hhcC
Confidence 9999999999999999999 9999999999999999999 9999999999999985 89999999999 9999
Q ss_pred CCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcC--CCCccccccccCCCCCcccccCHHHHHHHH
Q 015139 323 GETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG--KMTKDLALIIHGSKMTREHYLNTEEFIDAV 400 (412)
Q Consensus 323 k~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G--~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV 400 (412)
||+ |||+|+|||++|||+||| +.++|++|++||.+++++| ++|+||| | .++|+||+|+|
T Consensus 290 k~i-ANP~A~IlS~ammL~~lg-------~~~~A~~Ie~Av~~~l~~g~~~~T~Dlg----G-------~~~T~e~~dav 350 (354)
T 3blx_B 290 QDK-ANPTALLLSSVMMLNHMG-------LTNHADQIQNAVLSTIASGPENRTGDLA----G-------TATTSSFTEAV 350 (354)
T ss_dssp TTC-CCTHHHHHHHHHHHHHHT-------CHHHHHHHHHTHHHHHTSSTTSSCGGGT----C-------CCCHHHHHHHH
T ss_pred CCc-cCcHHHHHHHHHHHHHcC-------CHHHHHHHHHHHHHHHHcCCCccCCCcC----C-------CCCHHHHHHHH
Confidence 999 999999999999999987 6899999999999999999 8999998 7 68999999999
Q ss_pred HHHH
Q 015139 401 ADDL 404 (412)
Q Consensus 401 ~~~l 404 (412)
+++|
T Consensus 351 ~~~l 354 (354)
T 3blx_B 351 IKRL 354 (354)
T ss_dssp HHTC
T ss_pred HhhC
Confidence 9864
No 19
>2e0c_A 409AA long hypothetical NADP-dependent isocitrate dehydrogenase; homedimer, oxidoreductase; 2.00A {Sulfolobus tokodaii str} PDB: 2dht_A 2e5m_A*
Probab=100.00 E-value=1.9e-103 Score=801.29 Aligned_cols=359 Identities=20% Similarity=0.216 Sum_probs=304.2
Q ss_pred ccceeec--ccEEEECCCCchHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeE
Q 015139 3 FQKIKVA--NPIVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAI 73 (412)
Q Consensus 3 ~~~~~m~--~~I~vi~GDGiGpEv~~~~~~vl~~~-------~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~l 73 (412)
.+|++|. ++|++|||||||||||+++++||.++ +++|+|+++++|+++++++|+++|++++++|++++++|
T Consensus 16 ~~~~~vp~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~etl~~~k~~da~L 95 (409)
T 2e0c_A 16 KGKWIVPNKPVILYIEGDGIGPEITNAAIKVINKAVERAYGSSREIKWLEVYAGEKAEKLVNDRFPKETQEMLLKYRVVL 95 (409)
T ss_dssp SSCEECCSSBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCCTHHHHHHHSCSSCHHHHHHHHHHCEEE
T ss_pred CCeEecCCCceEeeCCCCCcCHHHHHHHHHHHHHHHHhhcCCCCceEEEEEechHHHHHhhCCcCCHHHHHHHHHCCEEE
Confidence 3555553 58999999999999999999998654 38999999999999999999999999999999999999
Q ss_pred ecccCCCCchhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCc
Q 015139 74 KCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGK 153 (412)
Q Consensus 74 kg~~~~p~~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrent 153 (412)
|||+++|... +++|+|++|||+||||+|+||+++ +|+ ..+|++ + ..++|+||+||||
T Consensus 96 kGav~tP~~~---------~~~s~~l~LR~~LdlyanvRPv~~--~~g----~~splk---~-----~~~vDivIvREnt 152 (409)
T 2e0c_A 96 KGPLETPIGK---------GWKSVNVAIRLMLDLYANIRPVKY--IEG----LESPLK---H-----PEKVDMIIFRENT 152 (409)
T ss_dssp ECCCC-----------------CHHHHHHHHTTCCEEEEEEEC--CTT----CCCSBS---C-----CTTCEEEEEEECS
T ss_pred ECCccCCCcc---------cccChhHHHHHHcCCEEEEEEEec--cCC----CCCCCC---C-----ccCCcEEEEEcCC
Confidence 9999999643 578999999999999999999864 233 335553 1 2479999999999
Q ss_pred cceeeccCCcccce---eeccc-------cCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCCC-CEEEEeCCCccccccH
Q 015139 154 LKLVFEGKDEKTEL---EVYNF-------TGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDG 221 (412)
Q Consensus 154 eg~y~g~~~~~~~~---~~~~~-------~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNvl~~tdg 221 (412)
||+|+|.++..... .+.+| .-.++++++ ++||+++++||+|+||+||++|++ +||+|||+|||+.|+|
T Consensus 153 eg~Y~g~e~~~~~~~~~~v~~f~~~~~~~~~~~~~a~~~~~~t~~~~eRiar~AFe~A~~r~rkkVt~v~KaNVlk~sdg 232 (409)
T 2e0c_A 153 DDLYRGIEYPFNSEEAKKIRDFLRKELKVEIEDDTGIGIKVMSKYKTQRITRLAIQYAIEHKRKKVTIMHKGNVMKYTEG 232 (409)
T ss_dssp SGGGGCCEECTTSHHHHHHHHHHHHHSCCCCCSSEEEEEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEECTTTSTTTHH
T ss_pred CCEeCCcccccCCCcccchhhccchhccccCCCceEEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECccchhhhhh
Confidence 99999875421000 00000 001468899 999999999999999999999954 6999999999999999
Q ss_pred HHHHHHHHHHHhhcCCcc-----------ccCCeEEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcc
Q 015139 222 RFKDIFQEVYEANWKSKF-----------EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLG 289 (412)
Q Consensus 222 lf~~~~~ev~a~~yp~~~-----------~~~~I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglG 289 (412)
+||++|+||++++|||+| +..+|+++|+|||+|+||||++|++| ||||+|||||||||++|+++||||
T Consensus 233 lf~~~~~eva~~eypd~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aa~l~GslG 312 (409)
T 2e0c_A 233 AFREWAYEVALKEYRDFIVTEEEINQGKPDQGKIILNDRIADNMFQQIIIRPEEYDIILAPNVNGDYISDAAGALIGNIG 312 (409)
T ss_dssp HHHHHHHHHHHHHSTTTEEEHHHHTTTCCCTTSEEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHTTSCGG
T ss_pred HHHHHHHHHHHHhCCCccccccccccccccCCeEEEEEEEHHHHHHHHhhCcccccEEEECCcchHHHHHHHHHhcCCcc
Confidence 999999999534999543 22349999999999999999999999 999999999999999999999999
Q ss_pred cccceeeCCCCceEEEccccccccccccccccCCCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHc
Q 015139 290 LMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVES 369 (412)
Q Consensus 290 lapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~ 369 (412)
|+||+|+|++ ++||||+||||| ||||||+ |||+|+|||++|||+||| +.++|++|++||.+|+++
T Consensus 313 l~pSanig~~--~a~fEp~HGSAP-----diAGk~i-ANP~A~IlS~ammL~~lg-------~~~~A~~Ie~Av~~~l~~ 377 (409)
T 2e0c_A 313 MLGGANIGDE--GGMFEAIHGTAP-----KYAGKNV-ANPTGIIKAGELMLRWMG-------WNEAADLIEKAINMAIRD 377 (409)
T ss_dssp GCEEEEEETT--EEEEEESSCCCG-----GGTTTTC-SCTHHHHHHHHHHHHHHT-------CHHHHHHHHHHHHHHHHT
T ss_pred cCceEEECCC--ceEEecCCCChh-----hhcCCcc-cCcHHHHHHHHHHHHhCC-------CHHHHHHHHHHHHHHHHc
Confidence 9999999976 599999999999 9999999 999999999999999987 689999999999999999
Q ss_pred CCCCccccccccCCCCCcccccCHHHHHHHHHHHHH
Q 015139 370 GKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLR 405 (412)
Q Consensus 370 G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l~ 405 (412)
|++|+||+...+| +.++|+||+|+|+++|+
T Consensus 378 g~~T~Dl~g~~g~------~~~~T~e~~daV~~~l~ 407 (409)
T 2e0c_A 378 KKVTQDIARFMGV------KALGTKEYADELIKIMD 407 (409)
T ss_dssp TCCCHHHHHHHTS------CCCCHHHHHHHHHHHHT
T ss_pred CCccccccccCCC------CCcCHHHHHHHHHHHHh
Confidence 9999999732213 26899999999999985
No 20
>1a05_A IPMDH, IMDH, 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, leucine biosynthesis; HET: IPM; 2.00A {Acidithiobacillus ferrooxidans} SCOP: c.77.1.1
Probab=100.00 E-value=3.7e-104 Score=794.89 Aligned_cols=347 Identities=21% Similarity=0.258 Sum_probs=303.5
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCchhH
Q 015139 10 NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARV 85 (412)
Q Consensus 10 ~~I~vi~GDGiGpEv~~~~~~vl~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~~~~ 85 (412)
++|+||||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|++++++||||+++|.+..+
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~l~Gavg~p~~~~~ 81 (358)
T 1a05_A 2 KKIAIFAGDGIGPEIVAAARQVLDAVDQAAHLGLRCTEGLVGGAALDASDDPLPAASLQLAMAADAVILGAVGGPRWDAY 81 (358)
T ss_dssp CEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCHHHHHHHHSSSSCHHHHHHHHHCSEEEEEECCCGGGTTS
T ss_pred cEEEEECCCCcCHHHHHHHHHHHHHHHHhcCCceEEEEEeCCcHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCCcccC
Confidence 68999999999999999999998765 79999999999999999999999999999999999999999999964321
Q ss_pred HHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCCccc
Q 015139 86 KEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKT 165 (412)
Q Consensus 86 ~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~~~~ 165 (412)
+. ..+++++ |++|||+||||+|+||+++ +|++.+ .+|++-. .+.++|+||+||||||+|+|.++.
T Consensus 82 ~~--~~~~e~~-ll~lRk~ldlyanvRP~~~--~pgl~~--~splk~~------~~~~vDivIvREnteg~Y~g~~~~-- 146 (358)
T 1a05_A 82 PP--AKRPEQG-LLRLRKGLDLYANLRPAQI--FPQLLD--ASPLRPE------LVRDVDILVVRELTGDIYFGQPRG-- 146 (358)
T ss_dssp CG--GGSHHHH-HHHHHHHHTCCEEEEEEEC--CTTSGG--GCSBCHH------HHTTCEEEEEEECSSSTTTCSSCE--
T ss_pred Cc--cccchhh-HHHHHHHcCCEEEEEEEEe--cCCccC--CCCCccc------cCCCceEEEEEecCCCcccCCcCc--
Confidence 10 0112344 7899999999999999965 355432 2555421 246899999999999999997432
Q ss_pred ceeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCccccCCe
Q 015139 166 ELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGI 244 (412)
Q Consensus 166 ~~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~~~I 244 (412)
... ..+ .+++++ ++||++++|||+|+||+||++|++|||+|||+|||+ +++||+++|+|| +++|| +|
T Consensus 147 -~~~--~~~-~~~a~~~~~~T~~~~eRiar~AFe~A~~rrkkVt~v~KaNvlk-~~~lf~~~~~ev-a~eyp------dI 214 (358)
T 1a05_A 147 -LEV--IDG-KRRGFNTMVYDEDEIRRIAHVAFRAAQGRRKQLCSVDKANVLE-TTRLWREVVTEV-ARDYP------DV 214 (358)
T ss_dssp -EEE--ETT-EEEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHH-GGGCT------TS
T ss_pred -ccc--CCC-CceEEEEEEEcHHHHHHHHHHHHHHHHhcCCeEEEEECCcccc-cchhHHHHHHHH-HHHCC------Cc
Confidence 100 012 467888 999999999999999999999988899999999999 999999999999 59999 99
Q ss_pred EEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccccCC
Q 015139 245 WYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGG 323 (412)
Q Consensus 245 ~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk 323 (412)
+++|+|||+|+||||++|++| ||||+|||||||||++|+++|||||+||+|+|+ + ++||||+||||| |||||
T Consensus 215 ~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig~-~-~~~fEpvHGSAP-----diAGk 287 (358)
T 1a05_A 215 RLSHMYVDNAAMQLIRAPAQFDVLLTGNMFGDILSDEASQLTGSIGMLPSASLGE-G-RAMYEPIHGSAP-----DIAGQ 287 (358)
T ss_dssp EEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHTTSCGGGCEEEEECS-S-CEEEEESSCCCG-----GGTTT
T ss_pred eEEeeeHHHHHHHHHhCCCcccEEEecCcccHhHHHHHHhhcCCccccceeeeCC-C-ceeeecCCCChh-----HhcCC
Confidence 999999999999999999999 999999999999999999999999999999994 4 599999999999 99999
Q ss_pred CcccChhhHHHHHHHHHHh-hcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCCCCCcccccCHHHHHHHHHH
Q 015139 324 ETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVAD 402 (412)
Q Consensus 324 ~i~ANP~a~IlS~ammL~~-lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~ 402 (412)
|+ |||+|+|||++|||+| || +.++|++|++||.+|+++|++|+||+.. |+ +.++|+||+|+|++
T Consensus 288 ~i-ANP~A~IlS~ammL~~~lg-------~~~~A~~Ie~Av~~~l~~g~~T~Dl~g~--g~-----~~~~T~e~~daV~~ 352 (358)
T 1a05_A 288 DK-ANPLATILSVAMMLRHSLN-------AEPWAQRVEAAVQRVLDQGLRTADIAAP--GT-----PVIGTKAMGAAVVN 352 (358)
T ss_dssp TC-SCCHHHHHHHHHHHHHTSS-------CHHHHHHHHHHHHHHHHTTCCCGGGCCT--TS-----CCCCHHHHHHHHHH
T ss_pred Cc-cCcHHHHHHHHHHHHHHcC-------CHHHHHHHHHHHHHHHHcCCcCcccccC--CC-----CCcCHHHHHHHHHH
Confidence 99 9999999999999999 76 6899999999999999999999999621 21 13899999999999
Q ss_pred HHH
Q 015139 403 DLR 405 (412)
Q Consensus 403 ~l~ 405 (412)
+|+
T Consensus 353 ~l~ 355 (358)
T 1a05_A 353 ALN 355 (358)
T ss_dssp TTT
T ss_pred Hhh
Confidence 985
No 21
>1vlc_A 3-isopropylmalate dehydrogenase; TM0556, structural genomics PSI, protein structure initiative, joint center for structu genomics; 1.90A {Thermotoga maritima} SCOP: c.77.1.1
Probab=100.00 E-value=7.2e-104 Score=792.34 Aligned_cols=343 Identities=18% Similarity=0.178 Sum_probs=302.1
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCchhH
Q 015139 10 NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARV 85 (412)
Q Consensus 10 ~~I~vi~GDGiGpEv~~~~~~vl~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~~~~ 85 (412)
.+|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+..+
T Consensus 13 ~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~L~Gavg~P~~~~~ 92 (366)
T 1vlc_A 13 MKIAVLPGDGIGPEVVREALKVLEVVEKKTGKTFEKVFGHIGGDAIDRFGEPLPEETKKICLEADAIFLGSVGGPKWDDL 92 (366)
T ss_dssp EEEEEEEESTHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCTHHHHHHHSSSSCHHHHHHHHHSSEEEEEECCCGGGTTS
T ss_pred eEEEEeCCCCccHHHHHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCccccC
Confidence 58999999999999999999998776 89999999999999999999999999999999999999999999964311
Q ss_pred HHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCcc-CCccEEEecCCccceeeccCCcc
Q 015139 86 KEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQY-RATDTVIQGPGKLKLVFEGKDEK 164 (412)
Q Consensus 86 ~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y-~~id~vivrenteg~y~g~~~~~ 164 (412)
+. . .++.+++|++|||+||||+|+||+++ +|++.+ .+|++- + .. .++|++|+||||||+|+|.++.
T Consensus 93 ~~-~-~r~~~~~~l~LRk~ldlyaN~RP~~~--~pgl~~--~splk~--~----~~~~~vDivIvREnteG~Y~g~~~~- 159 (366)
T 1vlc_A 93 PP-E-KRPEIGGLLALRKMLNLYANIRPIKV--YRSLVH--VSPLKE--K----VIGSGVDLVTVRELSYGVYYGQPRG- 159 (366)
T ss_dssp CS-T-TSHHHHTHHHHHHHTTCCEEEEEEEC--CGGGGG--GSSSCH--H----HHTTCCEEEEEEECSSGGGTEEEEE-
T ss_pred Cc-c-cCcccchhHHHHHHhCCEEEEEEccc--cCCCCC--cCCCcc--c----ccCCCceEEEEEeCCCCeecCCccc-
Confidence 00 0 01122348999999999999999865 354431 134320 0 01 4799999999999999987532
Q ss_pred cceeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCccccCC
Q 015139 165 TELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAG 243 (412)
Q Consensus 165 ~~~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~~~ 243 (412)
.+ ++++++ ++|||+++|||+|+||+||++|++|||+|||+|||+ |||||+++|+|| +++|| +
T Consensus 160 --------~~-~~~a~~~~~~Tr~~~eRIar~AFe~A~~rrkkVt~v~KaNvlk-t~glf~~~~~ev-a~eyp------d 222 (366)
T 1vlc_A 160 --------LD-EEKGFDTMIYDRKTVERIARTAFEIAKNRRKKVTSVDKANVLY-SSMLWRKVVNEV-AREYP------D 222 (366)
T ss_dssp --------EC-SSCEEEECCCCHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHH-HTTCT------T
T ss_pred --------cC-CCeEEEEEEEcHHHHHHHHHHHHHHHHHcCCeEEEEECCcccc-cchHHHHHHHHH-HHHCC------C
Confidence 12 468889 999999999999999999999988899999999999 999999999999 58999 9
Q ss_pred eEEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccccC
Q 015139 244 IWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKG 322 (412)
Q Consensus 244 I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~diaG 322 (412)
|+++|+|||+||||||++|++| ||||+|||||||||++|+++||+||+||+|+| + .+||||+||||| ||||
T Consensus 223 V~~~~~~VD~~~mqlv~~P~~FDVivt~NlfGDILSD~aa~l~GslGl~pSanig-~--~alfEpvHGSAP-----dIAG 294 (366)
T 1vlc_A 223 VELTHIYVDNAAMQLILKPSQFDVILTTNMFGDILSDESAALPGSLGLLPSASFG-D--KNLYEPAGGSAP-----DIAG 294 (366)
T ss_dssp SEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHTTSSSCGGGCEEEEES-S--SEEEEESSCCCT-----TTTT
T ss_pred ceEEeeeHHHHHHHHhhCcccceEEEEcchhHHHHHHHHHHhcCccccccEeeeC-C--ceeeecCCCchh-----hcCC
Confidence 9999999999999999999999 99999999999999999999999999999999 5 499999999999 9999
Q ss_pred CCcccChhhHHHHHHHHHHh-hcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCCCCCcccc-cCHHHHHHHH
Q 015139 323 GETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHY-LNTEEFIDAV 400 (412)
Q Consensus 323 k~i~ANP~a~IlS~ammL~~-lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~-~sT~e~~daV 400 (412)
||+ |||+|+|||++|||+| || +.++|++|++||.+|+++|++|+|||. +|+ + +||+||+|+|
T Consensus 295 k~i-ANP~A~IlS~ammL~~slg-------~~~~A~~Ie~Av~~~l~~g~~T~Dlg~--~gg------~~~~T~e~~daV 358 (366)
T 1vlc_A 295 KNI-ANPIAQILSLAMMLEHSFG-------MVEEARKIERAVELVIEEGYRTRDIAE--DPE------KAVSTSQMGDLI 358 (366)
T ss_dssp TTC-SCCHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHTTCCCGGGCS--SGG------GCCCHHHHHHHH
T ss_pred CCc-cCcHHHHHHHHHHHHHHcC-------ChhHHHHHHHHHHHHHHcCCccccccc--CCC------CCcCHHHHHHHH
Confidence 999 9999999999999999 87 689999999999999999999999972 121 4 8999999999
Q ss_pred HHHHHH
Q 015139 401 ADDLRA 406 (412)
Q Consensus 401 ~~~l~~ 406 (412)
+++|+.
T Consensus 359 ~~~l~~ 364 (366)
T 1vlc_A 359 CKKLEE 364 (366)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999964
No 22
>2d1c_A Isocitrate dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus}
Probab=100.00 E-value=2e-103 Score=809.91 Aligned_cols=343 Identities=21% Similarity=0.211 Sum_probs=314.2
Q ss_pred Cccceeec----ccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcC-CCCCHHHHHHHHcCCeeEecc
Q 015139 2 AFQKIKVA----NPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATD-DKVTVESAEATLKYNVAIKCA 76 (412)
Q Consensus 2 ~~~~~~m~----~~I~vi~GDGiGpEv~~~~~~vl~~~~~~i~~~~~~~G~~~~~~~g-~~lp~~~~dai~~~~v~lkg~ 76 (412)
..+||+|. ++|++||||||||||++++++||.+.+++|+|+++++|+++++++| +++|++++++|++++++||||
T Consensus 8 ~~~~i~~~~~g~~~IavipGDGIGpEV~~~a~~VL~a~~~~ie~~~~~~G~~~~~~~G~~~lp~etle~ik~~daiLkGa 87 (496)
T 2d1c_A 8 TGKKMHVLEDGRKLITVIPGDGIGPECVEATLKVLEAAKAPLAYEVREAGASVFRRGIASGVPQETIESIRKTRVVLKGP 87 (496)
T ss_dssp TSCEEEECTTSCEEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCSHHHHTTTCTTSCCHHHHHHHHHHCEEEECC
T ss_pred CCceeEeccCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHhccCCCcCcHHHHHHHHHCCEEEECC
Confidence 35789997 8999999999999999999999998899999999999999999999 999999999999999999999
Q ss_pred cCCCCchhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccce
Q 015139 77 TITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKL 156 (412)
Q Consensus 77 ~~~p~~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~ 156 (412)
+++|... +|+|+|++|||+||||+|+||++. +|++ .+|++ ..++|++|+||||||+
T Consensus 88 vgtP~~~---------~~~s~~l~LRk~LdLyaNlRP~k~--~pgl----~splk---------~~~vD~vIVREnTEG~ 143 (496)
T 2d1c_A 88 LETPVGY---------GEKSANVTLRKLFETYANVRPVRE--FPNV----PTPYA---------GRGIDLVVVRENVEDL 143 (496)
T ss_dssp CCCCSSS---------SSCCHHHHHHHHTTCCEEEEEEEC--BTTB----CCTTT---------TSCCEEEEEEECSSBG
T ss_pred ccCCCcc---------cccChHHHHHHHhCCEEEEEEEee--cCCC----Ccccc---------CCCccEEEEeeCcCce
Confidence 9999743 688999999999999999999753 4544 24432 1489999999999999
Q ss_pred eeccCCcccceeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcC-CCCEEEEeCCCccccccHHHHHHHHHHHHhh
Q 015139 157 VFEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVYEAN 234 (412)
Q Consensus 157 y~g~~~~~~~~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~ 234 (412)
|+|.++. . + ++++++ ++|||+++|||+|+||+||++| ++|||+|||+|||+.|+|||+++|+|| +++
T Consensus 144 Y~G~e~~-----~----~-~~va~~~~v~Tr~~ieRIar~AFe~A~~r~rkkVT~V~KaNVlk~sdGlfr~v~~eV-a~e 212 (496)
T 2d1c_A 144 YAGIEHM-----Q----T-PSVAQTLKLISWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQV-AQE 212 (496)
T ss_dssp GGCCEEE-----E----E-TTEEEEEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEECTTTCTTHHHHHHHHHHHH-HTT
T ss_pred EeceeEe-----c----C-CCeEEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECCCchhhHHHHHHHHHHHH-HHH
Confidence 9987532 1 1 578999 9999999999999999999999 567999999999999999999999999 689
Q ss_pred cCCccccCCeEEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEcccccccc
Q 015139 235 WKSKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVT 313 (412)
Q Consensus 235 yp~~~~~~~I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp 313 (412)
|| +|+++|+|||+|+||||++|++| ||||+|||||||||++|+++|||||+||+|+|+++ +||||+|||||
T Consensus 213 YP------dI~~e~~~VD~~amqLV~~P~~FDVIVt~NLfGDILSDlaA~l~GslGlapSanig~~~--a~FEpvHGSAP 284 (496)
T 2d1c_A 213 YP------DIEAVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIGNEV--AIFEAVHGSAP 284 (496)
T ss_dssp CT------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHTTTTCGGGCEEEEECSSC--EEEEESSCCCT
T ss_pred CC------CceEEEEeHHHHHHHHhhCcCcceEEEECCcchHHHHHHHHHhcCCcccCcEEEECCCC--ceeeCCCCchh
Confidence 99 99999999999999999999999 99999999999999999999999999999999885 89999999999
Q ss_pred ccccccccCCCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcC-CCCccccccccCCCCCcccccC
Q 015139 314 RHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKMTREHYLN 392 (412)
Q Consensus 314 ~~~~~diaGk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg~~~~G~~~~~~~~~s 392 (412)
||||||+ |||+|+|||++|||+||| +.++|++|++||.+++++| ++|+||| |. .+.++
T Consensus 285 -----DIAGk~i-ANP~A~IlSaamML~hlG-------~~~~A~~Ie~AV~~vl~~G~~~T~DLg----g~----~~~~s 343 (496)
T 2d1c_A 285 -----KYAGKNV-INPTAVLLSAVMMLRYLE-------EFATADLIENALLYTLEEGRVLTGDVV----GY----DRGAK 343 (496)
T ss_dssp -----TTTTSSC-CCCHHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHHHHHTSSCBHHHH----CT----TTCBC
T ss_pred -----hhcCCCc-cCcHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHcCCeeccccC----CC----CCCcC
Confidence 9999999 999999999999999977 5899999999999999999 8999998 51 02579
Q ss_pred HHHHHHHHHHHHHHHh
Q 015139 393 TEEFIDAVADDLRARL 408 (412)
Q Consensus 393 T~e~~daV~~~l~~~~ 408 (412)
|+||+|+|+++|++.+
T Consensus 344 T~e~~daV~~~L~~~~ 359 (496)
T 2d1c_A 344 TTEYTEAIIQNLGKTP 359 (496)
T ss_dssp HHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHhhhh
Confidence 9999999999996543
No 23
>2iv0_A Isocitrate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, domain swapping, phosphorylation, aromatic cluster, NADP; 2.5A {Archaeoglobus fulgidus}
Probab=100.00 E-value=2.3e-103 Score=800.64 Aligned_cols=358 Identities=22% Similarity=0.215 Sum_probs=309.5
Q ss_pred cceeec--ccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEeccc
Q 015139 4 QKIKVA--NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCAT 77 (412)
Q Consensus 4 ~~~~m~--~~I~vi~GDGiGpEv~~~~~~vl~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~ 77 (412)
+|++|. ++|++|||||||||||+++++||.++ +++|+|+++++|+++++++|+++|++++++|++++++||||+
T Consensus 20 ~~~~vp~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~etl~~~k~~da~LkGav 99 (412)
T 2iv0_A 20 GKLIVPDNPIIPYFEGDGIGKDVVPAAIRVLDAAADKIGKEVVWFQVYAGEDAYKLYGNYLPDDTLNAIKEFRVALKGPL 99 (412)
T ss_dssp TEEECCSSBEEEEECCSTTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSHHHHHHHSCSSCHHHHHHHHHHCEEEECCC
T ss_pred CeEeCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECCc
Confidence 444452 67999999999999999999998765 899999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCcccee
Q 015139 78 ITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLV 157 (412)
Q Consensus 78 ~~p~~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y 157 (412)
++|.+. +++|+|++|||+||||+|+||+++ +|++ .+|++ + ..++|+||+||||||+|
T Consensus 100 ~tP~~~---------~~~s~~l~LR~~Ldlyan~RPv~~--~~g~----~splk---~-----~~~vDivIvREnTeg~Y 156 (412)
T 2iv0_A 100 TTPVGG---------GYRSLNVTIRQVLDLYANVRPVYY--LKGV----PSPIK---H-----PEKVNFVIFRENTEDVY 156 (412)
T ss_dssp CCCSSS---------SSSHHHHHHHHHTTCCEEEEEEEC--CTTS----CCSBS---C-----GGGCEEEEEEECSSSGG
T ss_pred cCCCCc---------cccChhHHHHHHcCCeEEEEEEEe--cCCC----CCCCC---C-----cCCCCEEEEecCCCCEe
Confidence 999643 688999999999999999999964 2333 35553 1 24799999999999999
Q ss_pred eccCCccccee---eccc-------cCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCCC-CEEEEeCCCccccccHHHHH
Q 015139 158 FEGKDEKTELE---VYNF-------TGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKD 225 (412)
Q Consensus 158 ~g~~~~~~~~~---~~~~-------~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNvl~~tdglf~~ 225 (412)
+|.++...... +.++ .-.++++++ ++||++++|||+|+||+||++|++ |||+|||+|||+.|+|+||+
T Consensus 157 ~G~e~~~~~~~~~~v~~~~~~~~~~~~~~~~a~~~~~~t~~~~eRiar~AFe~A~~r~rkkVt~v~KaNVlk~t~Glf~~ 236 (412)
T 2iv0_A 157 AGIEWPRGSEEALKLIRFLKNEFGVTIREDSGIGIKPISEFATKRLVRMAIRYAIENNRKSVTLVHKGNIMKYTEGAFRD 236 (412)
T ss_dssp GCCEECTTCHHHHHHHHHHHHHHCCCCCTTEEEEEEEEEHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTCTTTHHHHHH
T ss_pred CCcccccCCccccchhhcccccccccCCCceEEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECccchhhhhHHHHH
Confidence 98754210000 0000 001468899 999999999999999999999954 69999999999999999999
Q ss_pred HHHHHHHhhcCCccc--------------cCCeEEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCccc
Q 015139 226 IFQEVYEANWKSKFE--------------AAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGL 290 (412)
Q Consensus 226 ~~~ev~a~~yp~~~~--------------~~~I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGl 290 (412)
+|+||++++||++|. ..+|+++|+|||+|+||||++|++| ||||+|||||||||++|+++|||||
T Consensus 237 ~~~eva~~eypd~~~~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aA~l~GslGl 316 (412)
T 2iv0_A 237 WGYEVAKQEFGEYCITEDELWDKYGGKQPEGKIVVKDRIADNMFQQILTRTDEYDVIALPNLNGDYLSDAAAALIGGLGI 316 (412)
T ss_dssp HHHHHHHHHSTTTEECHHHHHHHHTTCCCTTCEEEEEEEGGGHHHHHHHSGGGCCEEEECHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHhCCCccccccchhhhccccccCCeEEEEEEEHHHHHHHHhhCcccccEEEECCcchHHHHHHHHHhcCCccc
Confidence 999995349996441 2349999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeCCCCceEEEccccccccccccccccCCCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcC
Q 015139 291 MTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG 370 (412)
Q Consensus 291 apSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G 370 (412)
+||+|+|++ ++||||+||||| ||||||+ |||+|+|||++|||+||| +.++|++|++||.+++++|
T Consensus 317 apsanig~~--~a~fEp~HGSAP-----diAGk~i-ANP~A~IlS~amML~~lg-------~~~~A~~Ie~Av~~~l~~g 381 (412)
T 2iv0_A 317 APGSNIGDG--IGVFEPVHGSAP-----KYAGQNK-VNPTAEILTGALMFEYIG-------WKDASEMIKKAVEMTISSG 381 (412)
T ss_dssp CEEEEEETT--EEEEEESSCCCS-----TTTTSSC-SCCHHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHHHHTT
T ss_pred cceEEECCC--ceEEeCCCCChh-----hcCCCcc-cCcHHHHHHHHHHHHhCC-------CHHHHHHHHHHHHHHHHcC
Confidence 999999976 599999999999 9999999 999999999999999977 6899999999999999999
Q ss_pred CCCccccccccCCCCCcccccCHHHHHHHHHHHHH
Q 015139 371 KMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLR 405 (412)
Q Consensus 371 ~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l~ 405 (412)
++|+||+...+| +.+||+||+|+|+++|+
T Consensus 382 ~~T~Dl~~~~G~------~~~~T~e~~daV~~~l~ 410 (412)
T 2iv0_A 382 IVTYDIHRHMGG------TKVGTREFAEAVVENLQ 410 (412)
T ss_dssp EECHHHHHHHCS------EECCHHHHHHHHHHHHH
T ss_pred CcccccccccCC------CCcCHHHHHHHHHHHHh
Confidence 999999621113 26899999999999996
No 24
>3blx_A Isocitrate dehydrogenase [NAD] subunit 1; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_A 3blv_A*
Probab=100.00 E-value=9.1e-104 Score=787.92 Aligned_cols=328 Identities=17% Similarity=0.181 Sum_probs=299.0
Q ss_pred ecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCchhHHH
Q 015139 8 VANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKE 87 (412)
Q Consensus 8 m~~~I~vi~GDGiGpEv~~~~~~vl~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~~~~~e 87 (412)
..++|++||||||||||++++++||.+.+++|+|+++++|+ ++|+++|++++++|++++++||||+++|...
T Consensus 16 ~~~~I~vipGDGIGpEv~~~~~~Vl~a~~~~i~~~~~~~G~----~~g~~lp~~tl~~~~~~da~l~Gav~~P~~~---- 87 (349)
T 3blx_A 16 GRFTVTLIPGDGVGKEITDSVRTIFEAENIPIDWETINIKQ----TDHKEGVYEAVESLKRNKIGLKGLWHTPADQ---- 87 (349)
T ss_dssp CCEEEEEEEESHHHHHHHHHHHHHHHHTTCSEEEEECCCSS----TTCHHHHHHHHHHHHHHSEEEEEECCSHHHH----
T ss_pred CceEEEEECCCCcCHHHHHHHHHHHHHcCCCeEEEEEecCc----ccCCcCcHHHHHHHHHCCEEEECCccCCCCC----
Confidence 34799999999999999999999999889999999999998 7999999999999999999999999998431
Q ss_pred HHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCCcccce
Q 015139 88 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKTEL 167 (412)
Q Consensus 88 ~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~~~~~~ 167 (412)
.+++|+|++|||+||||+|+||++. +|++ .+| +.++|++|+||||||+|+|.++.
T Consensus 88 ----~~~~s~~l~lR~~ldlyan~RP~~~--~pg~----~~~-----------~~~vD~vivREnteg~Y~g~e~~---- 142 (349)
T 3blx_A 88 ----TGHGSLNVALRKQLDIYANVALFKS--LKGV----KTR-----------IPDIDLIVIRENTEGEFSGLEHE---- 142 (349)
T ss_dssp ----HTCHHHHHHHHHTSCEEEEEEEEEC--CTTC----CCS-----------SCSCEEEEEEECSSGGGGCEEEE----
T ss_pred ----CCccCchHHHHHHcCCEEEEEEEec--cCCC----CCC-----------CCCcCEEEEecCCCCcEeCCcee----
Confidence 1578899999999999999999863 3443 333 35899999999999999987532
Q ss_pred eeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcC-CCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCccccCCeE
Q 015139 168 EVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIW 245 (412)
Q Consensus 168 ~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~~~I~ 245 (412)
. . ++++++ ++|||+++|||+|+||+||++| ++|||+|||+|||+.|||||+++|+||+.++|| +|+
T Consensus 143 -~----~-~gva~~~~~~T~~~~eRiar~AF~~A~~r~rkkVt~v~KaNvlk~sdglf~~~~~eva~~eyp------~i~ 210 (349)
T 3blx_A 143 -S----V-PGVVESLKVMTRPKTERIARFAFDFAKKYNRKSVTAVHKANIMKLGDGLFRNIITEIGQKEYP------DID 210 (349)
T ss_dssp -C----S-TTEEEEEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEECTTTSTTHHHHHHHHHHHHHHHHCT------TSE
T ss_pred -c----c-CCeEEEEEEeCHHHHHHHHHHHHHHHHhcCCCcEEEEeCCccchhhHHHHHHHHHHHHHhhCC------Cee
Confidence 1 1 468888 9999999999999999999999 567999999999999999999999999438999 999
Q ss_pred EceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEcccc-ccccccccccccCC
Q 015139 246 YEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAH-GTVTRHYRVHQKGG 323 (412)
Q Consensus 246 ~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~H-GSAp~~~~~diaGk 323 (412)
++|+|||+|+||||++|++| ||||+|||||||||++|+++||+||+||+|+|+++ +||||+| |||| |||||
T Consensus 211 ~~~~~vD~~~~qlv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig~~~--a~fEpvH~GSAP-----diAGk 283 (349)
T 3blx_A 211 VSSIIVDNASMQAVAKPHQFDVLVTPSMYGTILGNIGAALIGGPGLVAGANFGRDY--AVFEPGSRHVGL-----DIKGQ 283 (349)
T ss_dssp EEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEEESSC--EEECCTTTTSCC-------CCT
T ss_pred EEEeeHHHHHHHHhhCcccccEEEECCcchHHHHHHHHhhcCCcccceEEEECCCc--eeEcCCCCCchh-----hhcCC
Confidence 99999999999999999999 99999999999999999999999999999999885 8999999 9999 99999
Q ss_pred CcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcC-CCCccccccccCCCCCcccccCHHHHHHHHHH
Q 015139 324 ETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKMTREHYLNTEEFIDAVAD 402 (412)
Q Consensus 324 ~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G-~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~ 402 (412)
|+ |||+|+|||++|||+||| +.++|++|++||.+++++| ++|+||| | .+||+||+|+|++
T Consensus 284 ~i-ANP~A~IlS~ammL~~lg-------~~~~A~~Ie~Av~~~l~~G~~~T~Dlg----g-------~~~T~e~~daI~~ 344 (349)
T 3blx_A 284 NV-ANPTAMILSSTLMLNHLG-------LNEYATRISKAVHETIAEGKHTTRDIG----G-------SSSTTDFTNEIIN 344 (349)
T ss_dssp TC-SCCHHHHHHHHHHHHHHT-------CCHHHHHHHHHHHHHHHSSSSCBGGGT----C-------CBCHHHHHHHHHH
T ss_pred CC-CCcHHHHHHHHHHHHhcC-------cHHHHHHHHHHHHHHHHcCCccCCCcC----C-------CCCHHHHHHHHHH
Confidence 99 999999999999999987 5789999999999999999 8999998 7 6899999999999
Q ss_pred HHHH
Q 015139 403 DLRA 406 (412)
Q Consensus 403 ~l~~ 406 (412)
+|++
T Consensus 345 ~l~~ 348 (349)
T 3blx_A 345 KLST 348 (349)
T ss_dssp HHHT
T ss_pred Hhcc
Confidence 9953
No 25
>2d4v_A Isocitrate dehydrogenase; alpha and beta protein, isocitrate/isopropylmalate dehydrogenase-like fold, oxidoreductase; HET: FLC NAD; 1.90A {Acidithiobacillus thiooxidans}
Probab=100.00 E-value=1.2e-102 Score=798.11 Aligned_cols=350 Identities=21% Similarity=0.198 Sum_probs=304.9
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhhcCC--CCCHHHHHHHHcCCeeEecccCCC
Q 015139 10 NPIVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDD--KVTVESAEATLKYNVAIKCATITP 80 (412)
Q Consensus 10 ~~I~vi~GDGiGpEv~~~~~~vl~~~-------~~~i~~~~~~~G~~~~~~~g~--~lp~~~~dai~~~~v~lkg~~~~p 80 (412)
++|++|||||||||||+++++||.++ +++|+|+++++|+++++++|+ ++|++++++|++++++||||+++|
T Consensus 27 ~~I~vipGDGIGpEV~~aa~~Vl~a~~~~~~~~~~~i~~~~~~~G~~~~~~~G~~~~lp~etl~~~k~~da~lkGav~tP 106 (429)
T 2d4v_A 27 PIIPFIEGDGIGCDVTPAMRSVVDAAVAKVYGGQRQIAWMELFAGQKAVQLYGEGQYLPDETMAAIREYKVAIKGPLETP 106 (429)
T ss_dssp BEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEEECCTHHHHHHHCTTCSSCHHHHHHHHHHCEEEECCCCCC
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHHHhhcCCCCceEEEEEeeehhhhhccCCCCCCcHHHHHHHHHCCEEEECCccCC
Confidence 77999999999999999999998654 389999999999999999999 999999999999999999999999
Q ss_pred CchhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeecc
Q 015139 81 DEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEG 160 (412)
Q Consensus 81 ~~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~ 160 (412)
... +++|+|++|||+||||+|+||+++ +|+ ..+|++ + ..++|+||+||||||+|+|.
T Consensus 107 ~~~---------~~~s~~l~LRk~LdLyanvRPv~~--~~g----v~splk---~-----~~~vDivIvREnTeg~Y~G~ 163 (429)
T 2d4v_A 107 VGG---------GIRSLNVAMRQDLDLYVCLRPVRY--FEG----TPSPMR---H-----PEKVDMVIFRENSEDIYAGI 163 (429)
T ss_dssp SSS---------SSCCHHHHHHHHTTCCEEEEEEEC--CTT----CCCSBS---C-----GGGCEEEEEEECSCGGGGCC
T ss_pred Ccc---------cccChhHHHHHHcCCEEEEEEEEe--cCC----CCCCCC---C-----cCCCCEEEEEeCCCCeecCc
Confidence 643 688999999999999999999864 233 335553 1 24799999999999999987
Q ss_pred CCcccc---------------eeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCCC-CEEEEeCCCccccccHHH
Q 015139 161 KDEKTE---------------LEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRF 223 (412)
Q Consensus 161 ~~~~~~---------------~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNvl~~tdglf 223 (412)
++.... .....++ ++++++ ++|||+++|||+|+||+||++|++ |||+|||+|||+.|+|||
T Consensus 164 e~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~a~~~~~~T~~~~eRIar~AFe~A~~r~rkkVT~v~KaNVlk~tdGlf 241 (429)
T 2d4v_A 164 EWPAGSPEAEKIIRFLREEMGVTKIRFP--DSSAIGIKPVSTEGSERLIRRTIQYALEHGKPSVSLVHKGNIMKFTEGGF 241 (429)
T ss_dssp EECTTCHHHHHHHHHHHHTSCCCCCSCG--GGEEEEEEEEEHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTSTTTHHHH
T ss_pred ccccCCcccccceeccccccccccccCC--CceEEEEEEecHHHHHHHHHHHHHHHHhcCCCeEEEEECCccchhhhHHH
Confidence 542100 0000111 468899 999999999999999999999954 699999999999999999
Q ss_pred HHHHHHHHHhhcCCccc--------------------------cCCeEEceeeHHHHHHHHHhCCCcc-EEEecCccccc
Q 015139 224 KDIFQEVYEANWKSKFE--------------------------AAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDV 276 (412)
Q Consensus 224 ~~~~~ev~a~~yp~~~~--------------------------~~~I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDI 276 (412)
|++|+||++++||+.+. ..+|+++|+|||+|+||||++|++| ||||+||||||
T Consensus 242 ~~~~~eva~~eypd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~fDVivt~NlfGDI 321 (429)
T 2d4v_A 242 RDWGYALAEREFAGRVFTWRQKAAISKAEGKAAGQKAEQQAIADGKLIIKDVIADNFLQQILLRPEDYSVVATLNLNGDY 321 (429)
T ss_dssp HHHHHHHHHHHSTTTEEEHHHHHHHHHHHCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHCGGGCCEEEECHHHHHH
T ss_pred HHHHHHHHHHhCCCccccccccccccccccccccchhccccccCCeeEEEEeeHHHHHHHHhhCcccCcEEEECCcccHH
Confidence 99999995349995431 1239999999999999999999999 99999999999
Q ss_pred ccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccccCCCcccChhhHHHHHHHHHHhhcccCCccchHHHH
Q 015139 277 QSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFT 356 (412)
Q Consensus 277 LSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A 356 (412)
|||++|+++|||||+||+|+|++ ++||||+||||| ||||||+ |||+|+|||++|||+||| +.++|
T Consensus 322 LSD~aA~l~GslGl~pSanig~~--~a~fEpvHGSAP-----diAGk~i-ANP~A~IlS~amML~hlg-------~~~~A 386 (429)
T 2d4v_A 322 VSDALAAEVGGIGMAPGANLSDT--HAIFEATHGTAP-----DIAGQGK-ANPSSLILSAVMMLEHLG-------WGEAA 386 (429)
T ss_dssp HHHHHHHHTTCGGGCCCEEECSS--CEEEECSCCCCT-----TTTTTTC-CCCHHHHHHHHHHHHHTT-------CHHHH
T ss_pred HHHHHHHhcCCHhhcCeeEECCC--ceEEecCCCChh-----HhcCCCC-cCcHHHHHHHHHHHHHcC-------CHHHH
Confidence 99999999999999999999976 499999999999 9999999 999999999999999987 68999
Q ss_pred HHHHHHHHHHHHcCCCCccccccccCCCCCcccccCHHHHHHHHHHHH
Q 015139 357 EKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDL 404 (412)
Q Consensus 357 ~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l 404 (412)
++|++||.+++++|.+|+|||..++|. +.++|+||+|+|+++|
T Consensus 387 ~~Ie~Av~~~l~~g~~T~Dlg~~~~g~-----~~~~T~e~~daV~~~l 429 (429)
T 2d4v_A 387 QAIVAAMNATIAAGEVTGDLAALRGDV-----PALSTTEFTAALIRRF 429 (429)
T ss_dssp HHHHHHHHHHHHTTCEEHHHHTTCTTC-----CEECHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCccccccccCCCC-----CCcCHHHHHHHHHhhC
Confidence 999999999999999999998322231 2489999999999864
No 26
>1tyo_A Isocitrate dehydrogenase; enzyme-ethenonadp complex, oxidoreductase; HET: ENP; 2.15A {Aeropyrum pernix} PDB: 1v94_A 1xgv_A 1xkd_A*
Probab=100.00 E-value=1.2e-102 Score=799.39 Aligned_cols=352 Identities=19% Similarity=0.164 Sum_probs=306.5
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCc
Q 015139 10 NPIVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (412)
Q Consensus 10 ~~I~vi~GDGiGpEv~~~~~~vl~~~-------~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~ 82 (412)
++|++|||||||||||+++++||.++ +++|+|+++++|++++++||+++|++++++|++++++||||+++|.+
T Consensus 36 ~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~etl~~~k~~da~LkGav~tP~~ 115 (435)
T 1tyo_A 36 PVVAFIRGDGVGPEVVESALKVVDAAVKKVYGGSRRIVWWELLAGHLAREKCGELLPKATLEGIRLARVALKGPLETPVG 115 (435)
T ss_dssp BEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCCSHHHHHHHSSSSCHHHHHHHHHHSEEEECCCCCCTT
T ss_pred CEEEEECCCCcCHHHHHHHHHHHHHHHHhhcCCCcceEEEEEechHHHHHhhCCcCCHHHHHHHHhCCeEEECCccCCCc
Confidence 77999999999999999999998654 38999999999999999999999999999999999999999999964
Q ss_pred hhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCC
Q 015139 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKD 162 (412)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~ 162 (412)
. +|+|+|++|||+||||+|+||+++.++ .+|++ + ..++|+||+||||||+|+|.++
T Consensus 116 ~---------~~~s~~l~LRk~LdlyanlRPv~~~gv-------~splk---~-----~~~vDivIvREnTeg~Y~G~e~ 171 (435)
T 1tyo_A 116 T---------GYRSLNVAIRQALDLYANIRPVRYYGQ-------PAPHK---Y-----ADRVDMVIFRENTEDVYAGIEW 171 (435)
T ss_dssp S---------CTTHHHHHHHHHHTCCEEEEEEECCSC-------CCSBT---T-----GGGCEEEEEEECSSSGGGCCEE
T ss_pred c---------cccChhHHHHHHcCCEEEeEEEEecCC-------CCCCC---C-----cCCCcEEEEecCCCCeeccccc
Confidence 3 688999999999999999999975322 35542 1 2479999999999999998754
Q ss_pred cccce---eeccc-------cCCCceEEE-eeeCHHHHHHHHHHHHHHHHcC-CCCEEEEeCCCccccccHHHHHHHHHH
Q 015139 163 EKTEL---EVYNF-------TGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEV 230 (412)
Q Consensus 163 ~~~~~---~~~~~-------~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNvl~~tdglf~~~~~ev 230 (412)
..... .+.++ ...++++++ ++||+++++||+|+||+||++| +++||+|||+|||+.|+|+|+++|+||
T Consensus 172 ~~~~~~~~~v~~~~~~~~~~~~~~~~a~~~~~~T~~~~eRIar~AFe~A~~r~rkkVT~v~KaNVlk~tdGlf~~~~~ev 251 (435)
T 1tyo_A 172 PHDSPEAARIRRFLAEEFGISIREDAGIGVKPISRFATRRLMERALEWALRNGNTVVTIMHKGNIMKYTEGAFMRWAYEV 251 (435)
T ss_dssp CTTSHHHHHHHHHHHHHHCCCCCTTEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEEECTTTSTTTHHHHHHHHHHH
T ss_pred ccCCccccceeccchhhccccCCCCeEEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECCccchhhhHHHHHHHHHH
Confidence 21000 00000 001468999 9999999999999999999998 567999999999999999999999999
Q ss_pred HHhhcCC-cc-------------ccCCeEEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCccccccee
Q 015139 231 YEANWKS-KF-------------EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVL 295 (412)
Q Consensus 231 ~a~~yp~-~~-------------~~~~I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSan 295 (412)
++++||+ .| +..+|+++|+|||+|+||||++|++| ||||+|||||||||++|+++|||||+||+|
T Consensus 252 a~~eypd~~~~e~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aA~l~GslGlapSan 331 (435)
T 1tyo_A 252 ALEKFREHVVTEQEVQEKYGGVRPEGKILVNDRIADNMLQQIITRPWDYQVIVAPNLNGDYISDAASALVGGIGMAAGMN 331 (435)
T ss_dssp HHHHSGGGEEEHHHHHHHSTTCCCTTCEEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCGGGCEEEE
T ss_pred HHHhCCCcccccccccccccccccCCeEEEEeeeHHHHHHHHhhCCCCceEEEEcccchHHHHHHHHhhcCCcccCceee
Confidence 5349995 22 23349999999999999999999999 999999999999999999999999999999
Q ss_pred eCCCCceEEEccccccccccccccccCCCcccChhhHHHHHHHHH-HhhcccCCccchHHHHHHHHHHHHHHHHcCCCCc
Q 015139 296 VCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGL-AHRAKLDNNARLLDFTEKLEAACIGTVESGKMTK 374 (412)
Q Consensus 296 ig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~a~IlS~ammL-~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~ 374 (412)
+|+++ +||||+||||| ||||||+ |||+|+|||++||| +||| +.++|++|++||.+|+++|.+|+
T Consensus 332 ig~~~--a~fEpvHGSAP-----diAGk~i-ANP~A~IlS~amML~~hlg-------~~~~A~~Ie~Av~~~l~~g~~T~ 396 (435)
T 1tyo_A 332 MGDGI--AVAEPVHGTAP-----KYAGKDL-INPSAEILSASLLIGEFMG-------WREVKSIVEYAIRKAVQSKKVTQ 396 (435)
T ss_dssp ECSSC--EEEEESSCCCG-----GGTTSSC-SCCHHHHHHHHHHHHTTSC-------CHHHHHHHHHHHHHHHHTTCCBH
T ss_pred ECCCc--eeeecCCCChH-----HhcCCCC-cCcHHHHHHHHHHHHHHcC-------CHHHHHHHHHHHHHHHHcCCcCc
Confidence 99874 89999999999 9999999 99999999999999 9977 68999999999999999999999
Q ss_pred cccccccCCCCCcccccCHHHHHHHHHHHHH
Q 015139 375 DLALIIHGSKMTREHYLNTEEFIDAVADDLR 405 (412)
Q Consensus 375 Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l~ 405 (412)
|||...+| .+.+||+||+|+|+++|+
T Consensus 397 Dlgg~~~g-----~~~~~T~e~~daV~~~l~ 422 (435)
T 1tyo_A 397 DLARHMPG-----VQPLRTSEYTETLIAYID 422 (435)
T ss_dssp HHHTTSTT-----CCCBCHHHHHHHHHHHHH
T ss_pred cccccCCC-----CCCcCHHHHHHHHHHHHh
Confidence 99832223 135899999999999995
No 27
>1hqs_A Isocitrate dehydrogenase; glyoxylate bypass, bsidh, tricarboxylic acid cycle, oxidoreductase, protein phosphorylation, NADP; HET: CME CIT; 1.55A {Bacillus subtilis} SCOP: c.77.1.1
Probab=100.00 E-value=8.9e-103 Score=798.60 Aligned_cols=351 Identities=22% Similarity=0.240 Sum_probs=305.6
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCc
Q 015139 10 NPIVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (412)
Q Consensus 10 ~~I~vi~GDGiGpEv~~~~~~vl~~~-------~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~ 82 (412)
++|++|||||||||||+++++||.++ +++|+|+++++|+++++++|+++|++++++|++++++||||+++|..
T Consensus 20 ~~I~vipGDGIGpEI~~~a~~Vl~a~~~~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~etl~~~k~~da~lkGav~tP~~ 99 (423)
T 1hqs_A 20 PIIPFIEGDGTGPDIWNAASKVLEAAVEKAYKGEKKITWKEVYAGEKAYNKTGEWLPAETLDVIREYFIAIKGPLTTPVG 99 (423)
T ss_dssp BEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCCTHHHHHHHSCSSCHHHHHHHHHHCEEEECCCCCCSS
T ss_pred CEEEEECCCCcCHHHHHHHHHHHHHHHhhhcCCCCceEEEEEecCHHHHHhhCCcCcHHHHHHHHHCCEEEECCccCCCC
Confidence 77999999999999999999988654 38999999999999999999999999999999999999999999964
Q ss_pred hhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCC
Q 015139 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKD 162 (412)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~ 162 (412)
. +|+|+|++|||+||||+|+||+++ +| ++.+|++ + ..++|+||+||||||+|+|.++
T Consensus 100 ~---------~~~s~nl~LRk~LdlyanvRPv~~--~p----g~~splk---~-----~~~vDivIvREnteg~Y~G~e~ 156 (423)
T 1hqs_A 100 G---------GIRSLNVALRQELDLFVCLRPVRY--FT----GVPSPVK---R-----PEDTDMVIFRENTEDIYAGIEY 156 (423)
T ss_dssp S---------SSCCHHHHHHHHTTCCEEEEEEEC--CT----TCCCSBS---C-----GGGCEEEEEEECSCGGGGCCEE
T ss_pred c---------CcCChhHHHHHHcCCEEEEEEEec--cC----CCCCCCC---C-----CCCCcEEEEecCCCCeeccccc
Confidence 3 689999999999999999999864 34 3346653 1 2489999999999999998754
Q ss_pred cccc---------------eeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcC-CCCEEEEeCCCccccccHHHHH
Q 015139 163 EKTE---------------LEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKD 225 (412)
Q Consensus 163 ~~~~---------------~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNvl~~tdglf~~ 225 (412)
.... +....++ ++++++ ++||++++|||+|+||+||++| +++||+|||+|||+.|+|+|++
T Consensus 157 ~~g~~~~~~v~~~~~~~~~~~~~~~~--~~~a~~~~~~T~~~~eRiar~AFe~A~~r~rkkVt~v~KaNVlk~t~Glf~~ 234 (423)
T 1hqs_A 157 AKGSEEVQKLISFLQNELNVNKIRFP--ETSGIGIKPVSEEGTSRLVRAAIDYAIEHGRKSVTLVHKGNIMKFTEGAFKN 234 (423)
T ss_dssp CTTCHHHHHHHHHHHHHSCCCCCSCG--GGEEEEEEEEEHHHHHHHHHHHHHHHHHHTCSEEEEEECTTTSTTTHHHHHH
T ss_pred ccCCccccceeccccccccccccccC--CceEEEEEEEcHHHHHHHHHHHHHHHHHcCCCcEEEEECCccchhhhHHHHH
Confidence 2100 0000011 468999 9999999999999999999998 5679999999999999999999
Q ss_pred HHHHHHHhhcCCcc--------------------------ccCCeEEceeeHHHHHHHHHhCCCcc-EEEecCccccccc
Q 015139 226 IFQEVYEANWKSKF--------------------------EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQS 278 (412)
Q Consensus 226 ~~~ev~a~~yp~~~--------------------------~~~~I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILS 278 (412)
+|+||++++|||.. +..+|+++|+|||+|+||||++|++| ||||+||||||||
T Consensus 235 ~~~eva~~eypd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILS 314 (423)
T 1hqs_A 235 WGYELAEKEYGDKVFTWAQYDRIAEEQGKDAANKAQSEAEAAGKIIIKDSIADIFLQQILTRPNEFDVVATMNLNGDYIS 314 (423)
T ss_dssp HHHHHHHHHHGGGEEEHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHH
T ss_pred HHHHHHHHhCCCcccchhhhccccccccccccccccccccccCeEEEEEeeHHHHHHHHhhCCCCccEEEECCcchHHHH
Confidence 99999534999521 23349999999999999999999999 9999999999999
Q ss_pred chhhhhcCCcccccceeeCC-CCceEEEccccccccccccccccCCCcccChhhHHHHHHHHHHhhcccCCccchHHHHH
Q 015139 279 DFLAQGFGSLGLMTSVLVCP-DGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTE 357 (412)
Q Consensus 279 Dlaa~l~GglGlapSanig~-~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~ 357 (412)
|++|+++|||||+||+|+|+ ++ ++||||+||||| ||||||+ |||+|+|||++|||+||| +.++|+
T Consensus 315 D~aA~l~GslGl~pSanigp~~~-~alfEp~HGSAP-----diAGk~i-ANP~A~IlS~amML~hlg-------~~~~A~ 380 (423)
T 1hqs_A 315 DALAAQVGGIGIAPGANINYETG-HAIFEATHGTAP-----KYAGLDK-VNPSSVILSGVLLLEHLG-------WNEAAD 380 (423)
T ss_dssp HHHHHHTTCTTTCEEEEECTTTC-CEEEEESCCCCG-----GGTTTTC-SCCHHHHHHHHHHHHHHT-------CHHHHH
T ss_pred HHHHhhcCCcccCccceecCCCC-ceEEecCCCChh-----hhCCCCC-cCcHHHHHHHHHHHHHcC-------CHHHHH
Confidence 99999999999999999993 33 599999999999 9999999 999999999999999987 689999
Q ss_pred HHHHHHHHHHHcCCCCccccccccCCCCCcccccCHHHHHHHHHHHH
Q 015139 358 KLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDL 404 (412)
Q Consensus 358 ~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l 404 (412)
+|++||.+|+++|.+|+||+..++| .+.++|+||+|+|+++|
T Consensus 381 ~Ie~Av~~~l~~g~~T~Dl~g~~~g-----~~~~~T~e~~daV~~~l 422 (423)
T 1hqs_A 381 LVIKSMEKTIASKVVTYDFARLMDG-----ATEVKCSEFGEELIKNM 422 (423)
T ss_dssp HHHHHHHHHHHTTEECHHHHTTSSS-----CEECCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCcccccccccCC-----CCCcCHHHHHHHHHHhh
Confidence 9999999999999999999832222 12589999999999876
No 28
>1w0d_A 3-isopropylmalate dehydrogenase; oxidoreductase, leucine biosynthesis, NAD, ST genomics, PSI, protein structure initiative; 1.65A {Mycobacterium tuberculosis} SCOP: c.77.1.1 PDB: 2g4o_A
Probab=100.00 E-value=9.2e-103 Score=778.70 Aligned_cols=333 Identities=17% Similarity=0.155 Sum_probs=296.6
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCchhHHHHH
Q 015139 10 NPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFV 89 (412)
Q Consensus 10 ~~I~vi~GDGiGpEv~~~~~~vl~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~~~~~e~~ 89 (412)
++|++|||||||||||+++++||.+.+.+|+|+++++|+++++++|+++|++++++|+++|++||||+++|...+ +
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~G~~~~~~~g~~lp~~t~~~~~~~da~l~Gav~~P~~~~----~ 77 (337)
T 1w0d_A 2 SKLAIIAGDGIGPEVTAEAVKVLDAVVPGVQKTSYDLGARRFHATGEVLPDSVVAELRNHDAILLGAIGDPSVPS----G 77 (337)
T ss_dssp CEEEEEEESTTHHHHHHHHHHHHHHHSTTCEEEECCCSHHHHHHHSCSSCHHHHHHHTTSSEEEEEECCCTTSCT----T
T ss_pred cEEEEeCCCCcCHHHHHHHHHHHHHhcCCcEEEEEecchHHHhhhCCcCCHHHHHHHHHCCEEEECCccCCCCCC----c
Confidence 689999999999999999999987665569999999999999999999999999999999999999999995321 0
Q ss_pred hhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCCcccceee
Q 015139 90 LKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKTELEV 169 (412)
Q Consensus 90 l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~~~~~~~~ 169 (412)
..++|+|++|||+||||+|+||+++ +|++ .+|++- .. ++|++|+||||||+|+|.++..
T Consensus 78 --~~~~s~~l~lR~~ldlyan~RP~~~--~pg~----~s~l~~-------~~-~~DivivREnteg~Y~g~e~~~----- 136 (337)
T 1w0d_A 78 --VLERGLLLRLRFELDHHINLRPARL--YPGV----ASPLSG-------NP-GIDFVVVREGTEGPYTGNGGAI----- 136 (337)
T ss_dssp --HHHHHTHHHHHHHTTCCEEEEEEEC--CTTC----CCSBTT-------CC-CCEEEEEEECSCSGGGCCEEEE-----
T ss_pred --ccccchHHHHHHHcCCEEEEEEeec--CCCC----CCcccC-------CC-CCcEEEEecCCCCeecCCccee-----
Confidence 1356889999999999999999864 3444 355431 11 3999999999999999975431
Q ss_pred ccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCccccCCeEEce
Q 015139 170 YNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEH 248 (412)
Q Consensus 170 ~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~~~I~~~~ 248 (412)
.... .++++++ ++|||+++|||+|+||+||++|++|||+|||+|||+.|||||+++|+|| +++|| +|+++|
T Consensus 137 ~~g~-~~~~a~~~~~~T~~~~eRiar~AFe~A~~rrkkVt~v~KaNvlk~s~glf~~~~~ev-a~eyp------~i~~~~ 208 (337)
T 1w0d_A 137 RVGT-PNEVATEVSVNTAFGVRRVVADAFERARRRRKHLTLVHKTNVLTFAGGLWLRTVDEV-GECYP------DVEVAY 208 (337)
T ss_dssp STTS-TTCEEEEEEEEEHHHHHHHHHHHHHHHHHTTSEEEEEECTTTSHHHHHHHHHHHHHH-HTTCT------TSEEEE
T ss_pred cCCC-CCCeEEEEEEEcHHHHHHHHHHHHHHHHHcCCeEEEEECCccchhhhHHHHHHHHHH-HHHCC------ceEEEE
Confidence 1111 2468999 9999999999999999999999888999999999999999999999999 58999 999999
Q ss_pred eeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCc-eEEEccccccccccccccccCCCcc
Q 015139 249 RLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGK-TIEAEAAHGTVTRHYRVHQKGGETS 326 (412)
Q Consensus 249 ~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~-~a~FEp~HGSAp~~~~~diaGk~i~ 326 (412)
+|||+|+||||++|++| ||||+|||||||||++|+++||+||+||+|+|+++. ++||||+||||| ||||||+
T Consensus 209 ~~vD~~~mqlv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~psanig~~~~~~a~fEp~HGSAP-----diAGk~i- 282 (337)
T 1w0d_A 209 QHVDAATIHMITDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATRANPSMFEPVHGSAP-----DIAGQGI- 282 (337)
T ss_dssp EEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCGGGCEEEEECTTCSSCEEEEESSCCCG-----GGTTSSC-
T ss_pred EEHHHHHHHHhhCcccccEEEECcchhHHHHHHHhhhcCCcccCceeEeCCCCCCceEEecCCCChh-----hhCCCCC-
Confidence 99999999999999999 999999999999999999999999999999998641 589999999999 9999999
Q ss_pred cChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCCCCCcccccCHHHHHHHHHHHH
Q 015139 327 TNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDL 404 (412)
Q Consensus 327 ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l 404 (412)
|||+|+|||++|||+||| +.++|++|++||.+|+++| | |. .+||+||+|+|+++|
T Consensus 283 ANP~A~IlS~ammL~~lg-------~~~~A~~Ie~Av~~~l~~g------g----g~------~~~T~e~~~av~~~l 337 (337)
T 1w0d_A 283 ADPTAAIMSVALLLSHLG-------EHDAAARVDRAVEAHLATR------G----SE------RLATSDVGERIAAAL 337 (337)
T ss_dssp SCCHHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHHHHHC------T----TC------CCCHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHcC------C----CC------CcCHHHHHHHHHhhC
Confidence 999999999999999977 6899999999999999999 5 52 579999999999864
No 29
>1itw_A Isocitrate dehydrogenase; greece KEY motif, oxidoreductase; HET: ICT; 1.95A {Azotobacter vinelandii} SCOP: c.77.1.2 PDB: 1j1w_A*
Probab=96.20 E-value=0.081 Score=55.39 Aligned_cols=184 Identities=15% Similarity=0.179 Sum_probs=121.9
Q ss_pred CceEEEeeeCHHHHHHHHHHHHHHHHcCCCCEEE-EeCCCccccccHHHHHHHHHHHHhhcCCccccCCeEEcee-eHHH
Q 015139 176 GGVALSMYNTDESIRAFAEASMNTAYQKKWPLYL-STKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHR-LIDD 253 (412)
Q Consensus 176 ~~~a~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~-v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~~~I~~~~~-~VDa 253 (412)
.+++..+.--..-++-+++.|.++||..+-+..+ .|+.-. -|. +....| +.|=......|+.+.-+ -+++
T Consensus 453 GDIwRmcq~KDapI~DWVkLAV~Rar~sg~pavFWLD~~Ra---HDa---~lI~kV--~~yL~~hdt~GLdi~Im~p~~A 524 (741)
T 1itw_A 453 GDIWRMCQAKDAPIQDWVKLAVNRARATNTPAVFWLDPARA---HDA---QVIAKV--ERYLKDYDTSGLDIRILSPVEA 524 (741)
T ss_dssp TCEEEEEEECHHHHHHHHHHHHHHHHHHTCCEEEECCTTSH---HHH---HHHHHH--HHHHTTSCCTTCCEEEECHHHH
T ss_pred CcchhhhhccCchHHHHHHHHHHHHHhcCCCeEEeeCCCCc---cHH---HHHHHH--HHHHHhcCCCCCceEeeCHHHH
Confidence 3565554446778999999999999998876443 333211 233 333444 22321222335666655 4566
Q ss_pred HHHH--HHhCCCccEEEecCcccccccchhhh--hcCCcccccceeeCCCCceEEEcc-ccccccccccccc-cCCCccc
Q 015139 254 MVAY--ALKSEGGYVWACKNYDGDVQSDFLAQ--GFGSLGLMTSVLVCPDGKTIEAEA-AHGTVTRHYRVHQ-KGGETST 327 (412)
Q Consensus 254 ~~~~--lv~~P~~FVivt~NlfGDILSDlaa~--l~GglGlapSanig~~~~~a~FEp-~HGSAp~~~~~di-aGk~i~A 327 (412)
+-.- -+++-..-+-||.|..=|.|+||.-- |.-|-=|+.-.=+=..| ++||. .-||||+|-.+=+ -|-=. =
T Consensus 525 ~~~sleRir~G~dTISVTGNVLRDYLTDLFPIlELGTSAKMLSIVPLm~GG--GLfETGAGGSAPKHVqQ~~eEnhLR-W 601 (741)
T 1itw_A 525 TRFSLARIREGKDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMSGG--GLFETGAGGSAPKHVQQFLEEGYLR-W 601 (741)
T ss_dssp HHHHHHHHHTTCCCEEEECHHHHHHHHHHHHHHHHSCSSSSEEEEEBTTSC--EEEESCSSCCCHHHHHHHHHHSCCC-C
T ss_pred HHHHHHHHHcCCCeEEeechhhhhhccccchhhhhccchhHhhhcccccCC--ccccCCCCcCchHHHHHHHHcCccc-h
Confidence 6433 34555555889999999999999874 44443333222222233 89999 7899997664322 23334 6
Q ss_pred ChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcC
Q 015139 328 NSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG 370 (412)
Q Consensus 328 NP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G 370 (412)
+.+|=+|+.+--|+|+++-.+|+...-.|+.|..|..+.|+++
T Consensus 602 DSLGEFlALa~Sle~l~~~~~N~kA~vLa~tLD~At~~~L~n~ 644 (741)
T 1itw_A 602 DSLGEFLALAASLEHLGNAYKNPKALVLASTLDQATGKILDNN 644 (741)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHhHHHHHhhcCChHHHHHHHHHHHHHHHHHhCC
Confidence 8899999999999999977666666667999999999999876
No 30
>2b0t_A NADP isocitrate dehydrogenase; monomeric, IDH, oxidoreductase; 1.75A {Corynebacterium glutamicum} PDB: 3mbc_A*
Probab=96.11 E-value=0.082 Score=55.34 Aligned_cols=184 Identities=13% Similarity=0.135 Sum_probs=121.3
Q ss_pred CceEEEeeeCHHHHHHHHHHHHHHHHcCCCCEEE-EeCCCccccccHHHHHHHHHHHHhhcCCccccCCeEEcee-eHHH
Q 015139 176 GGVALSMYNTDESIRAFAEASMNTAYQKKWPLYL-STKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHR-LIDD 253 (412)
Q Consensus 176 ~~~a~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~-v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~~~I~~~~~-~VDa 253 (412)
.+++..+.--..-++-+++.|.++||..+-+..+ .|+.-. -|. +....| +.|=......|+.+.-+ -+++
T Consensus 449 GDIwRmcq~KDapI~DWVkLAV~Rar~sg~pavFWLD~~Ra---HDa---~lI~kV--~~yL~~hdt~GLdi~Im~p~~A 520 (738)
T 2b0t_A 449 NDIWRACQVKDAPIQDWVKLAVTRSRLSGMPAVFWLDPERA---HDR---NLASLV--EKYLADHDTEGLDIQILSPVEA 520 (738)
T ss_dssp TCEEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEECCTTCH---HHH---HHHHHH--HHHHTTSCCTTCCEEEECHHHH
T ss_pred CcchhhhhccCchHHHHHHHHHHHHHhcCCCeEEeeCCCCc---cHH---HHHHHH--HHHHHhcCCCCCceEeeCHHHH
Confidence 3565554446778999999999999998876443 333211 233 333444 22321222335666655 4566
Q ss_pred HHHH--HHhCCCccEEEecCcccccccchhhh--hcCCcccccceeeCCCCceEEEcc-ccccccccccccc-cCCCccc
Q 015139 254 MVAY--ALKSEGGYVWACKNYDGDVQSDFLAQ--GFGSLGLMTSVLVCPDGKTIEAEA-AHGTVTRHYRVHQ-KGGETST 327 (412)
Q Consensus 254 ~~~~--lv~~P~~FVivt~NlfGDILSDlaa~--l~GglGlapSanig~~~~~a~FEp-~HGSAp~~~~~di-aGk~i~A 327 (412)
+-.- -+++-..-+-||.|..=|.|+||.-- |.-|-=|+.-.=+=..| ++||. .-||||+|-.+=+ -|-=. =
T Consensus 521 ~~~slerir~G~dTISVTGNVLRDYLTDLFPIlELGTSAKMLSIVPLm~GG--GLfETGAGGSAPKHVqQ~~eEnhLR-W 597 (738)
T 2b0t_A 521 TQLSIDRIRRGEDTISVTGNVLRDYNTDLFPILELGTSAKMLSVVPLMAGG--GLFETGAGGSAPKHVQQVQEENHLR-W 597 (738)
T ss_dssp HHHHHHHHHTTCCCEEEECHHHHHHHHHHHHHHHHSCSSSCEEEEEBTTSC--EEEECCSSCCCHHHHHHHHHHSCCC-C
T ss_pred HHHHHHHHHcCCCeEEeechhhhhhccccchhhhhccchhHhhhcccccCC--ccccCCCCcCchHHHHHHHHcCccc-h
Confidence 6433 34555555889999999999999874 44443333222222233 89999 7899997664322 23334 6
Q ss_pred ChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcC
Q 015139 328 NSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG 370 (412)
Q Consensus 328 NP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G 370 (412)
+.+|=+|+.+--|+|+++-.+|+...-.|+.|..|..+.|+++
T Consensus 598 DSLGEFlALa~Sle~l~~~~~N~kA~vLa~tLD~At~~~L~n~ 640 (738)
T 2b0t_A 598 DSLGEFLALAESFRHELNNNGNTKAGVLADALDKATEKLLNEE 640 (738)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHhHHHHHhhcCChHHHHHHHHHHHHHHHHHhCC
Confidence 8899999999999999876666555667999999999999876
No 31
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=93.26 E-value=0.046 Score=53.97 Aligned_cols=138 Identities=14% Similarity=0.021 Sum_probs=83.4
Q ss_pred eeeCHHHHHHHHHHHHHHHHc-CC--CCEEEEeCCCccccccHHH--------HHHHHHHHHhhcCCccccCCeEE-cee
Q 015139 182 MYNTDESIRAFAEASMNTAYQ-KK--WPLYLSTKNTILKKYDGRF--------KDIFQEVYEANWKSKFEAAGIWY-EHR 249 (412)
Q Consensus 182 ~~~Tr~~~eRiar~AFe~A~~-r~--~~Vt~v~KaNvl~~tdglf--------~~~~~ev~a~~yp~~~~~~~I~~-~~~ 249 (412)
..+|++.+.+.++...+--++ -+ ++-..|-==|==.--+|+| .-+.++. ++ . +|.+ --.
T Consensus 173 ~~it~e~i~~~i~~~~~~L~~~fgi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~Pai~~~-r~--~------Gi~~~GP~ 243 (328)
T 1yxo_A 173 DAISDERLTRVARILHADLRDKFGIAHPRILVCGLNPHAGEGGHLGREEIEVIEPCLERL-RG--E------GLDLIGPL 243 (328)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTTCCSSCEEEEECSSGGGGTTTTTCSHHHHTHHHHHHHH-HT--T------TCEEEEEE
T ss_pred HhcCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCCCCCCCCCHhHHHHHHHHHHHH-HH--C------CCceeCCC
Confidence 457999999999888875444 23 2223333334322223444 1222332 22 1 6666 366
Q ss_pred eHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccccCCCcccC
Q 015139 250 LIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTN 328 (412)
Q Consensus 250 ~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~AN 328 (412)
--|.+-.+-.+ ++| ++|| || =|.+-.-.=-+|+--+.|+--.--.----|-||||- ||||||+ ||
T Consensus 244 paDT~F~~~~~--~~~D~vla--MY----HDQGlip~K~l~F~~gVNvTlGLP~iRTSvDHGTAf-----DIAGkG~-A~ 309 (328)
T 1yxo_A 244 PADTLFTPKHL--EHCDAVLA--MY----HDQGLPVLKYKGFGAAVNVTLGLPIIRTSVDHGTAL-----DLAGSGR-ID 309 (328)
T ss_dssp CHHHHTSHHHH--TTCSEEEE--SS----HHHHHHHHHHHHTTSCEEEEESSSSCEEEECSCCCG-----GGTTTCC-CC
T ss_pred Cchhhcccccc--cCCCEEEE--cc----cccccHhHhhcccCcceEEecCCCEEEecCCCCccc-----cccCCCC-CC
Confidence 67777655544 467 4443 33 367666666666767777642210122358999999 9999999 99
Q ss_pred hhhHHHHHHHHHHh
Q 015139 329 SIASIFAWSRGLAH 342 (412)
Q Consensus 329 P~a~IlS~ammL~~ 342 (412)
|.+++-|.-+..+.
T Consensus 310 ~~Sl~~Ai~~A~~~ 323 (328)
T 1yxo_A 310 SGSLQVALETAYQM 323 (328)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 99999997766654
No 32
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=93.21 E-value=0.046 Score=54.04 Aligned_cols=137 Identities=15% Similarity=0.065 Sum_probs=83.5
Q ss_pred eeeCHHHHHHHHHHHHHHHHcCC--CCEEEEeCCCccccccHHH-HH-------HHHHHHHhhcCCccccCCeEE-ceee
Q 015139 182 MYNTDESIRAFAEASMNTAYQKK--WPLYLSTKNTILKKYDGRF-KD-------IFQEVYEANWKSKFEAAGIWY-EHRL 250 (412)
Q Consensus 182 ~~~Tr~~~eRiar~AFe~A~~r~--~~Vt~v~KaNvl~~tdglf-~~-------~~~ev~a~~yp~~~~~~~I~~-~~~~ 250 (412)
..+|++.+.+.++...++-++-+ ++-..|-==|==.--+|+| +| +.++. ++ . +|.+ --.-
T Consensus 180 ~~it~e~i~~~i~~~~~L~~~fgi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~PAi~~~-r~--~------Gi~~~GP~p 250 (330)
T 2hi1_A 180 DTLSTARVETVIGIADTFLKRVGYVKPRIAVAGVNPHAGENGLFGDEETRILTPAITDA-RA--K------GMDVYGPCP 250 (330)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTTCSSCEEEEECSSGGGSSTTSCCHHHHHTHHHHHHHH-HT--T------TCEEEEEEC
T ss_pred HhcCHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCCCCCCCCCHhHHHHHHHHHHHH-HH--C------CCceeCCCC
Confidence 45899999999999988333233 2223333234222223443 22 22332 22 1 6766 4666
Q ss_pred HHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccccCCCcccCh
Q 015139 251 IDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNS 329 (412)
Q Consensus 251 VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~ANP 329 (412)
-|.+-.+-.+ ++| ++|| || =|.+-.-.=-+|+--+.|+--.--.----|-||||- ||||||+ |||
T Consensus 251 aDT~F~~~~~--~~~D~vla--MY----HDQGlip~K~l~F~~gVNvTlGLP~iRTSvDHGTAf-----DIAGkG~-A~~ 316 (330)
T 2hi1_A 251 PDTVFLQAYE--GQYDMVVA--MY----HDQGHIPLKLLGFYDGVNITAGLPFIRTSADHGTAF-----DIAWTGK-AKS 316 (330)
T ss_dssp HHHHHHHHHT--TSCSEEEE--SS----HHHHHHHHHHCC-CCSEEEEETSSSEEEEESCCCCT-----TTTTTTC-CCC
T ss_pred chhhcccccc--ccCCEEEE--cc----cccccHhHhhcccCcceEEecCCCEEEecCCCCccc-----cccCCCC-CCh
Confidence 7877666544 577 5543 33 477766666777777888652210123458999999 9999999 999
Q ss_pred hhHHHHHHHHHH
Q 015139 330 IASIFAWSRGLA 341 (412)
Q Consensus 330 ~a~IlS~ammL~ 341 (412)
.+++-|.-+..+
T Consensus 317 ~Sl~~Ai~~A~~ 328 (330)
T 2hi1_A 317 ESMAVSIKLAMQ 328 (330)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998766554
No 33
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=93.12 E-value=0.05 Score=53.89 Aligned_cols=137 Identities=14% Similarity=-0.007 Sum_probs=84.1
Q ss_pred eeeCHHHHHHHHHHHHHHHHcC-C---CCEEEEeCCCccccccHH--------HHHHHHHHHHhhcCCccccCCeEEc-e
Q 015139 182 MYNTDESIRAFAEASMNTAYQK-K---WPLYLSTKNTILKKYDGR--------FKDIFQEVYEANWKSKFEAAGIWYE-H 248 (412)
Q Consensus 182 ~~~Tr~~~eRiar~AFe~A~~r-~---~~Vt~v~KaNvl~~tdgl--------f~~~~~ev~a~~yp~~~~~~~I~~~-~ 248 (412)
..+|.+.+.+.++.+.+--+++ + -|+-+.- =|=-....|+ -+-+.++. +++ ++.++ .
T Consensus 178 ~~it~e~i~~~i~~~~~~l~~~fGi~~PrIAV~g-LNPHAGE~G~~G~EE~~iI~PAi~~l-r~~--------Gi~~~GP 247 (334)
T 3lxy_A 178 GAITQASLHEVITILDNDLKTKFGITQPQIYVCG-LNPHAGEGGHMGHEEIDTIIPALNTL-RQQ--------GINLIGP 247 (334)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTSCCSSCCEEEEC-SSGGGGGGGTTCSHHHHTHHHHHHHH-HHT--------TCCEEEE
T ss_pred hhCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEe-cCCCCCCCCCCCchhHHHHHHHHHHH-HHC--------CCceeCC
Confidence 4578999999999888766652 3 2554431 1111111233 34444444 232 55543 6
Q ss_pred eeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccccCCCccc
Q 015139 249 RLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETST 327 (412)
Q Consensus 249 ~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~A 327 (412)
+--|++-..-.+ +.| ++||.+. |.+-.-.=-+++--+.|+--.--.----|-||||- ||||||+ |
T Consensus 248 ~paDt~F~~~~~--~~~D~vlaMYH------DQGlip~K~l~F~~gVNvTlGLP~iRTS~DHGTAf-----DIAGkG~-A 313 (334)
T 3lxy_A 248 LPADTLFQPKYL--QHADAVLAMYH------DQGLPVLKYQGFGRAVNITLGLPFIRTSVDHGTAL-----ELAATGT-A 313 (334)
T ss_dssp ECHHHHTSHHHH--TTCSEEEESSH------HHHHHHHHHHHTTCCEEEEESSSSCEEEESSCCCG-----GGTTTTC-S
T ss_pred CChHHhcChhhh--ccCCEEEEccc------chhhHhHHhcccCccEEEecCCCeeeecCCCCcch-----hhccCCC-C
Confidence 678887665554 577 7777654 45554445555556667542210122358999999 9999999 9
Q ss_pred ChhhHHHHHHHHHHh
Q 015139 328 NSIASIFAWSRGLAH 342 (412)
Q Consensus 328 NP~a~IlS~ammL~~ 342 (412)
||.+++-|.-+..+.
T Consensus 314 ~~~S~~~Ai~~A~~~ 328 (334)
T 3lxy_A 314 DVGSFITALNLAIKM 328 (334)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHH
Confidence 999999887776654
No 34
>4aty_A Terephthalate 1,2-CIS-dihydrodiol dehydrogenase; oxidoreductase; 1.85A {Burkholderia xenovorans LB400}
Probab=92.93 E-value=0.051 Score=54.06 Aligned_cols=133 Identities=11% Similarity=0.007 Sum_probs=73.2
Q ss_pred eeeCHHHHHHHHHHHHHHHHcCC--C-CEEEEeCCCccccccHHH-HH-------HHHHHHHhhcCCccccCCeEEc-ee
Q 015139 182 MYNTDESIRAFAEASMNTAYQKK--W-PLYLSTKNTILKKYDGRF-KD-------IFQEVYEANWKSKFEAAGIWYE-HR 249 (412)
Q Consensus 182 ~~~Tr~~~eRiar~AFe~A~~r~--~-~Vt~v~KaNvl~~tdglf-~~-------~~~ev~a~~yp~~~~~~~I~~~-~~ 249 (412)
..+|++.+.+.++...+.-++-+ + |+-+ -==|==...+|+| +| +.++. +++ ++.+. -.
T Consensus 195 ~~It~~~I~~~i~~~~~~l~~fgi~~PrIaV-~GLNPHaGE~G~~G~EE~~iI~Pai~~l-~~~--------gi~v~GP~ 264 (349)
T 4aty_A 195 ARLDQRHVERAARAAVQALQLMGIAHPVVGL-MGINPHAGEGGLFGRDDIDITEPVARKL-RDD--------GMTVIGPQ 264 (349)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTC-CCCCEEE-ECSSGGGGTTTTTCSHHHHTHHHHHHHH-HHC---------CCEEEEE
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcCCCCceEE-EecCCCCCccccccchHHHHHHHHHHHH-HHC--------CCeEeCCC
Confidence 45788888888777766555443 2 3322 1122222223444 22 23333 221 44443 45
Q ss_pred eHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccccCCCcccC
Q 015139 250 LIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTN 328 (412)
Q Consensus 250 ~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~i~AN 328 (412)
-.|.+- .+.+| ++|+ || =|.+-.-.=-++.--+.|+--.--.----|-||||- ||||||+ ||
T Consensus 265 paDt~F-----~~~~~D~vla--MY----HDQgl~p~K~l~f~~~vnitlGLp~iRtS~dHGta~-----diagkg~-a~ 327 (349)
T 4aty_A 265 GADLLL-----TNPDIDVFVA--MY----HDQGHIPVKLRAGRHSAALSIGAGVLFSSVGHGSGF-----DIAGTLL-AD 327 (349)
T ss_dssp CHHHHT-----TCTTCSEEEE--SS----HHHHHHHHHHHHTTSEEEEEESSSSEEEECCSCCCT-----TSTTTTC-CC
T ss_pred chhhhh-----ccCCCCEEEE--cc----cccchHHHHhcccCCcEEEecCCCeeEeCCCCChhh-----hhccCCC-CC
Confidence 566654 24578 6654 33 345433333444445566432110122358899999 9999999 99
Q ss_pred hhhHHHHHHHHHH
Q 015139 329 SIASIFAWSRGLA 341 (412)
Q Consensus 329 P~a~IlS~ammL~ 341 (412)
|.+++-|.-|+..
T Consensus 328 ~~s~~~Ai~~a~~ 340 (349)
T 4aty_A 328 PAPLLGAIRLVTT 340 (349)
T ss_dssp CHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999988776654
No 35
>3tsn_A 4-hydroxythreonine-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: UNL; 2.63A {Campylobacter jejuni subsp}
Probab=91.65 E-value=0.091 Score=52.53 Aligned_cols=60 Identities=17% Similarity=0.071 Sum_probs=41.3
Q ss_pred ccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccccCCC-cccChhhHHHHHHHHHHh
Q 015139 277 QSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGE-TSTNSIASIFAWSRGLAH 342 (412)
Q Consensus 277 LSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~diaGk~-i~ANP~a~IlS~ammL~~ 342 (412)
-=|.+-.-.=-+|+--+.|+--.--.----|-||||- |||||| + |||.+++-|.-+..+.
T Consensus 303 YHDQGliplK~l~F~~gVNvTlGLP~IRTSvDHGTAf-----DIAGkG~~-Ad~~Sl~~Ai~~A~~~ 363 (367)
T 3tsn_A 303 YHDLALAPLKALYFDKSINVSLNLPIIRVSVDHGTAF-----DKAYKNAK-INTKSYFEAAKFAINL 363 (367)
T ss_dssp SHHHHHHHHHHHCTTTCEEEEESSSSCEEECCCCSCT-----TSCSSCCC-CCCHHHHHHHHHHHHS
T ss_pred cccCcchhhhhcccCccEEEecCCCeeeecCCCCcch-----hhcCCCCc-CChHHHHHHHHHHHHh
Confidence 3456555555556666777542210112358899999 999999 9 9999999997776654
No 36
>4aoy_A Isocitrate dehydrogenase [NADP]; oxidoreductase, temperature adaptation, thermophilic, psychr NADP+ selectivity, domain movements; 2.35A {Clostridium thermocellum} PDB: 4aou_A
Probab=88.81 E-value=0.12 Score=52.33 Aligned_cols=20 Identities=5% Similarity=-0.213 Sum_probs=12.2
Q ss_pred CccEEEecCCccceeeccCC
Q 015139 143 ATDTVIQGPGKLKLVFEGKD 162 (412)
Q Consensus 143 ~id~vivrenteg~y~g~~~ 162 (412)
++|+||+||||||+|+|.++
T Consensus 125 ~~DivIvREnteg~Y~g~e~ 144 (402)
T 4aoy_A 125 KKPISIARHAYGDVYKNVEY 144 (402)
T ss_dssp CBCCEEEEC------CCEEE
T ss_pred CCCEEEEEeccCCeecCcee
Confidence 69999999999999999764
No 37
>3us8_A Isocitrate dehydrogenase [NADP]; PSI-biology, structural genomics; 2.25A {Sinorhizobium meliloti}
Probab=81.23 E-value=0.35 Score=49.39 Aligned_cols=20 Identities=0% Similarity=-0.250 Sum_probs=17.9
Q ss_pred CccEEEecCCccceeeccCC
Q 015139 143 ATDTVIQGPGKLKLVFEGKD 162 (412)
Q Consensus 143 ~id~vivrenteg~y~g~~~ 162 (412)
++|+||+||||||+|+|.++
T Consensus 148 ~~DivIvREnteg~Y~g~e~ 167 (427)
T 3us8_A 148 TKPIIVGRHAFGDQYRATDF 167 (427)
T ss_dssp CSCEEEEEECSSGGGGCEEE
T ss_pred CCCEEEEEeCCCCccCCcee
Confidence 59999999999999998654
No 38
>2e0c_A 409AA long hypothetical NADP-dependent isocitrate dehydrogenase; homedimer, oxidoreductase; 2.00A {Sulfolobus tokodaii str} PDB: 2dht_A 2e5m_A*
Probab=72.52 E-value=1.5 Score=44.46 Aligned_cols=21 Identities=24% Similarity=0.241 Sum_probs=18.7
Q ss_pred CCceeecccccCCccCCccEE
Q 015139 127 TKPICIGRHAFGDQYRATDTV 147 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~v 147 (412)
+.|++|+||||||.|.++++.
T Consensus 142 ~vDivIvREnteg~Y~g~e~~ 162 (409)
T 2e0c_A 142 KVDMIIFRENTDDLYRGIEYP 162 (409)
T ss_dssp TCEEEEEEECSSGGGGCCEEC
T ss_pred CCcEEEEEcCCCCEeCCcccc
Confidence 479999999999999998763
No 39
>2d4v_A Isocitrate dehydrogenase; alpha and beta protein, isocitrate/isopropylmalate dehydrogenase-like fold, oxidoreductase; HET: FLC NAD; 1.90A {Acidithiobacillus thiooxidans}
Probab=71.29 E-value=1.4 Score=45.00 Aligned_cols=21 Identities=19% Similarity=0.121 Sum_probs=18.8
Q ss_pred CCceeecccccCCccCCccEE
Q 015139 127 TKPICIGRHAFGDQYRATDTV 147 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~v 147 (412)
+.|++|+||||||.|.++++.
T Consensus 146 ~vDivIvREnTeg~Y~G~e~~ 166 (429)
T 2d4v_A 146 KVDMVIFRENSEDIYAGIEWP 166 (429)
T ss_dssp GCEEEEEEECSCGGGGCCEEC
T ss_pred CCCEEEEEeCCCCeecCcccc
Confidence 479999999999999998863
No 40
>2iv0_A Isocitrate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, domain swapping, phosphorylation, aromatic cluster, NADP; 2.5A {Archaeoglobus fulgidus}
Probab=70.95 E-value=1.5 Score=44.50 Aligned_cols=21 Identities=19% Similarity=0.110 Sum_probs=18.7
Q ss_pred CCceeecccccCCccCCccEE
Q 015139 127 TKPICIGRHAFGDQYRATDTV 147 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~v 147 (412)
+.|++|+||||||.|.++++.
T Consensus 142 ~vDivIvREnTeg~Y~G~e~~ 162 (412)
T 2iv0_A 142 KVNFVIFRENTEDVYAGIEWP 162 (412)
T ss_dssp GCEEEEEEECSSSGGGCCEEC
T ss_pred CCCEEEEecCCCCEeCCcccc
Confidence 479999999999999998763
No 41
>1w0d_A 3-isopropylmalate dehydrogenase; oxidoreductase, leucine biosynthesis, NAD, ST genomics, PSI, protein structure initiative; 1.65A {Mycobacterium tuberculosis} SCOP: c.77.1.1 PDB: 2g4o_A
Probab=70.91 E-value=2 Score=42.43 Aligned_cols=21 Identities=14% Similarity=0.196 Sum_probs=19.2
Q ss_pred CceeecccccCCccCCccEEE
Q 015139 128 KPICIGRHAFGDQYRATDTVI 148 (412)
Q Consensus 128 ~~l~i~Re~~~~~y~~id~vi 148 (412)
.|++|+||||||.|.+.++.+
T Consensus 116 ~DivivREnteg~Y~g~e~~~ 136 (337)
T 1w0d_A 116 IDFVVVREGTEGPYTGNGGAI 136 (337)
T ss_dssp CEEEEEEECSCSGGGCCEEEE
T ss_pred CcEEEEecCCCCeecCCccee
Confidence 899999999999999998764
No 42
>1wpw_A 3-isopropylmalate dehydrogenase; oxidoreductase; 2.80A {Sulfolobus tokodaii} SCOP: c.77.1.1
Probab=68.55 E-value=3.1 Score=41.03 Aligned_cols=21 Identities=24% Similarity=0.368 Sum_probs=18.9
Q ss_pred CceeecccccCCccCCccEEE
Q 015139 128 KPICIGRHAFGDQYRATDTVI 148 (412)
Q Consensus 128 ~~l~i~Re~~~~~y~~id~vi 148 (412)
.|++|+||||||.|.+.++.+
T Consensus 110 ~D~vivREnteg~Y~g~~~~~ 130 (336)
T 1wpw_A 110 VDILIVRENTEDLYKGFEHIV 130 (336)
T ss_dssp CEEEEEEECSSBTTTCCEEEE
T ss_pred CcEEEEecCccCeEcCCcccc
Confidence 899999999999999988654
No 43
>3flk_A Tartrate dehydrogenase/decarboxylase; cytoplasm, lyase, magnesium, manganese, NAD, oxidoreductase; HET: NAD; 2.00A {Pseudomonas putida} PDB: 3fmx_X*
Probab=66.76 E-value=3.3 Score=41.29 Aligned_cols=23 Identities=9% Similarity=0.161 Sum_probs=20.0
Q ss_pred CCceeecccccCCccCCccEEEe
Q 015139 127 TKPICIGRHAFGDQYRATDTVIQ 149 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~viv 149 (412)
..|++|+||||||.|.+.+....
T Consensus 127 ~vD~vivREnteG~Y~g~~~~~~ 149 (364)
T 3flk_A 127 DIDFVVVRENTEGEYSSLGGIMF 149 (364)
T ss_dssp SSEEEEEEECSSBTCCCCEEEES
T ss_pred CCCEEEEeeCCCceecCcCceec
Confidence 58999999999999999876553
No 44
>3blx_A Isocitrate dehydrogenase [NAD] subunit 1; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_A 3blv_A*
Probab=66.48 E-value=2.4 Score=42.14 Aligned_cols=20 Identities=5% Similarity=0.097 Sum_probs=18.2
Q ss_pred CceeecccccCCccCCccEE
Q 015139 128 KPICIGRHAFGDQYRATDTV 147 (412)
Q Consensus 128 ~~l~i~Re~~~~~y~~id~v 147 (412)
.|++|+||||||.|.+.++.
T Consensus 123 vD~vivREnteg~Y~g~e~~ 142 (349)
T 3blx_A 123 IDLIVIRENTEGEFSGLEHE 142 (349)
T ss_dssp CEEEEEEECSSGGGGCEEEE
T ss_pred cCEEEEecCCCCcEeCCcee
Confidence 79999999999999998764
No 45
>3ty4_A Probable homoisocitrate dehydrogenase; B-hydroxyacid oxidative decarboxylase, amino-acid biosynthes lysine biosynthesis; 1.55A {Schizosaccharomyces pombe} SCOP: c.77.1.0 PDB: 3ty3_A
Probab=65.50 E-value=3.9 Score=40.81 Aligned_cols=21 Identities=14% Similarity=0.170 Sum_probs=18.9
Q ss_pred CceeecccccCCccCCccEEE
Q 015139 128 KPICIGRHAFGDQYRATDTVI 148 (412)
Q Consensus 128 ~~l~i~Re~~~~~y~~id~vi 148 (412)
.|++|+||||||.|.+.+..+
T Consensus 124 vD~vivREnTeG~Y~g~e~~~ 144 (366)
T 3ty4_A 124 VDLVIVRENTECLYVKEERMV 144 (366)
T ss_dssp CEEEEEEECSCBGGGCCEEEE
T ss_pred CcEEEEeeCCCCEeecCccee
Confidence 579999999999999998765
No 46
>1hqs_A Isocitrate dehydrogenase; glyoxylate bypass, bsidh, tricarboxylic acid cycle, oxidoreductase, protein phosphorylation, NADP; HET: CME CIT; 1.55A {Bacillus subtilis} SCOP: c.77.1.1
Probab=65.32 E-value=2.4 Score=43.15 Aligned_cols=21 Identities=19% Similarity=0.213 Sum_probs=18.8
Q ss_pred CCceeecccccCCccCCccEE
Q 015139 127 TKPICIGRHAFGDQYRATDTV 147 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~v 147 (412)
..|++|+||||||.|.++++.
T Consensus 137 ~vDivIvREnteg~Y~G~e~~ 157 (423)
T 1hqs_A 137 DTDMVIFRENTEDIYAGIEYA 157 (423)
T ss_dssp GCEEEEEEECSCGGGGCCEEC
T ss_pred CCcEEEEecCCCCeecccccc
Confidence 589999999999999998763
No 47
>3dms_A Isocitrate dehydrogenase [NADP]; struc genomics, seattle structural genomics center for infectious ssgcid, glyoxylate bypass, manganese; 1.65A {Burkholderia pseudomallei} SCOP: c.77.1.1 PDB: 1pb1_A* 1ai3_A* 1ika_A* 1ai2_A* 1p8f_A* 1pb3_A 1sjs_A 3icd_A 3lcb_C* 4aj3_A* 4aja_A* 4icd_A* 5icd_A* 9icd_A* 1bl5_A* 1cw7_A* 1idd_A 1ide_A* 1hj6_A* 7icd_A ...
Probab=65.12 E-value=2.5 Score=43.06 Aligned_cols=21 Identities=19% Similarity=0.177 Sum_probs=18.8
Q ss_pred CCceeecccccCCccCCccEE
Q 015139 127 TKPICIGRHAFGDQYRATDTV 147 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~v 147 (412)
..|++|+||||||.|.++++.
T Consensus 156 ~vDivIvREnTeG~Y~G~e~~ 176 (427)
T 3dms_A 156 KTNMVIFRENSEDIYAGIEWA 176 (427)
T ss_dssp GCCEEEEEECSSGGGGCCEEC
T ss_pred CceEEEEEECCCCEecCcccc
Confidence 589999999999999998764
No 48
>1tyo_A Isocitrate dehydrogenase; enzyme-ethenonadp complex, oxidoreductase; HET: ENP; 2.15A {Aeropyrum pernix} PDB: 1v94_A 1xgv_A 1xkd_A*
Probab=63.22 E-value=2.5 Score=43.13 Aligned_cols=21 Identities=19% Similarity=0.132 Sum_probs=18.9
Q ss_pred CCceeecccccCCccCCccEE
Q 015139 127 TKPICIGRHAFGDQYRATDTV 147 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~v 147 (412)
..|++|+||||||.|.++++.
T Consensus 152 ~vDivIvREnTeg~Y~G~e~~ 172 (435)
T 1tyo_A 152 RVDMVIFRENTEDVYAGIEWP 172 (435)
T ss_dssp GCEEEEEEECSSSGGGCCEEC
T ss_pred CCcEEEEecCCCCeecccccc
Confidence 589999999999999998763
No 49
>2uxq_A Isocitrate dehydrogenase native; psychrophilic, cold adaptation, thermal stability, oxidoreductase; HET: SO4 PEG; 1.75A {Desulfotalea psychrophila} PDB: 2uxr_A*
Probab=63.17 E-value=1.5 Score=44.34 Aligned_cols=20 Identities=5% Similarity=-0.115 Sum_probs=17.5
Q ss_pred CccEEEecCCccceeeccCC
Q 015139 143 ATDTVIQGPGKLKLVFEGKD 162 (412)
Q Consensus 143 ~id~vivrenteg~y~g~~~ 162 (412)
.+|++|+||||||+|++.+.
T Consensus 124 ~~divIvRE~teg~Y~g~e~ 143 (402)
T 2uxq_A 124 QKPIVVGRHAYGDFYKNAEI 143 (402)
T ss_dssp CSCCEEEEECSCGGGGCEEE
T ss_pred CCCeEEEeccCCCcccCcce
Confidence 59999999999999997543
No 50
>3blx_B Isocitrate dehydrogenase [NAD] subunit 2; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_B* 3blv_B
Probab=59.62 E-value=2.7 Score=41.84 Aligned_cols=21 Identities=10% Similarity=0.252 Sum_probs=18.4
Q ss_pred CCceeecccccCCccCCccEE
Q 015139 127 TKPICIGRHAFGDQYRATDTV 147 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~v 147 (412)
..|++|+||||||.|.+.+..
T Consensus 128 ~vD~vivREnteg~Y~g~e~~ 148 (354)
T 3blx_B 128 NVDLVLIRENTEGEYSGIEHI 148 (354)
T ss_dssp SCEEEEEEECSSEEEEEEEEE
T ss_pred CccEEEEecCcCCcccCCccc
Confidence 389999999999999988754
No 51
>3r8w_A 3-isopropylmalate dehydrogenase 2, chloroplastic; dimer, isocitrate and isopropylmalate dehydrogenases family, biosynthesis; 2.25A {Arabidopsis thaliana}
Probab=58.24 E-value=4.9 Score=40.62 Aligned_cols=23 Identities=17% Similarity=0.161 Sum_probs=19.9
Q ss_pred CCceeecccccCCccCCccEEEe
Q 015139 127 TKPICIGRHAFGDQYRATDTVIQ 149 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~viv 149 (412)
..|++|+||||||.|.+++....
T Consensus 167 ~vD~vIvREnTeG~Y~G~e~~~~ 189 (405)
T 3r8w_A 167 GVDLMVVRELTGGIYFGEPRGIK 189 (405)
T ss_dssp TCEEEEEEECSCSTTTCSSCEEE
T ss_pred CceEEEEeeCCCCeecCCccccc
Confidence 48999999999999999887554
No 52
>1x0l_A Homoisocitrate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, lysine biosyn; 1.85A {Thermus thermophilus} PDB: 3asj_A* 3ah3_A
Probab=54.67 E-value=4.9 Score=39.56 Aligned_cols=21 Identities=14% Similarity=0.107 Sum_probs=18.6
Q ss_pred CCceeecccccCCccCCccEE
Q 015139 127 TKPICIGRHAFGDQYRATDTV 147 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~v 147 (412)
..|++|+||||||.|.+.++.
T Consensus 110 ~vD~vivREnteg~Y~g~~~~ 130 (333)
T 1x0l_A 110 GVDLVIVRENTEGLYVEQERR 130 (333)
T ss_dssp SCEEEEEEECGGGTCCCCEEE
T ss_pred CCCEEEEecCccceecccccc
Confidence 389999999999999998764
No 53
>3vmk_A 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase; HET: IPM; 1.48A {Shewanella benthica} PDB: 3vml_A* 3vmj_A* 3vl2_A* 3vkz_A* 3vl4_A* 3vl6_A* 3vl7_A* 3vl3_A*
Probab=53.87 E-value=5.8 Score=39.72 Aligned_cols=22 Identities=18% Similarity=-0.022 Sum_probs=19.1
Q ss_pred CCceeecccccCCccCCccEEE
Q 015139 127 TKPICIGRHAFGDQYRATDTVI 148 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~vi 148 (412)
..|++|+||||||.|.+.+..+
T Consensus 140 ~vD~vIvREnTeG~Y~g~~~~~ 161 (375)
T 3vmk_A 140 GFDILCVRELTGGIYFGKPKGR 161 (375)
T ss_dssp CCEEEEEEECSSBTTTCSSCEE
T ss_pred CCCEEEEeeCCCCEecCCcccc
Confidence 5899999999999999986544
No 54
>1vlc_A 3-isopropylmalate dehydrogenase; TM0556, structural genomics PSI, protein structure initiative, joint center for structu genomics; 1.90A {Thermotoga maritima} SCOP: c.77.1.1
Probab=52.30 E-value=4.7 Score=40.21 Aligned_cols=23 Identities=9% Similarity=-0.039 Sum_probs=19.9
Q ss_pred CCceeecccccCCccCCccEEEe
Q 015139 127 TKPICIGRHAFGDQYRATDTVIQ 149 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~viv 149 (412)
..|++|+||||||.|.+.++...
T Consensus 139 ~vDivIvREnteG~Y~g~~~~~~ 161 (366)
T 1vlc_A 139 GVDLVTVRELSYGVYYGQPRGLD 161 (366)
T ss_dssp CCEEEEEEECSSGGGTEEEEEEC
T ss_pred CceEEEEEeCCCCeecCCccccC
Confidence 48999999999999999987643
No 55
>2d1c_A Isocitrate dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus}
Probab=49.00 E-value=8.9 Score=39.73 Aligned_cols=25 Identities=12% Similarity=0.187 Sum_probs=20.8
Q ss_pred CCceeecccccCCccCCccEEEecC
Q 015139 127 TKPICIGRHAFGDQYRATDTVIQGP 151 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~vivre 151 (412)
..|++|+||||||.|.++...+..+
T Consensus 130 ~vD~vIVREnTEG~Y~G~e~~~~~~ 154 (496)
T 2d1c_A 130 GIDLVVVRENVEDLYAGIEHMQTPS 154 (496)
T ss_dssp CCEEEEEEECSSBGGGCCEEEEETT
T ss_pred CccEEEEeeCcCceEeceeEecCCC
Confidence 4899999999999999988765433
No 56
>3u1h_A 3-isopropylmalate dehydrogenase; oxidored; 2.80A {Bacillus SP} PDB: 2ayq_A 1v53_A 1v5b_A
Probab=48.74 E-value=5.3 Score=40.16 Aligned_cols=22 Identities=18% Similarity=0.128 Sum_probs=15.0
Q ss_pred CCceeecccccCCccCCccEEE
Q 015139 127 TKPICIGRHAFGDQYRATDTVI 148 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~vi 148 (412)
..|++|+||||||.|.+.+...
T Consensus 148 ~vD~vIVREnTeG~Y~g~~~~~ 169 (390)
T 3u1h_A 148 GVDLVIVRELTGGLYFGEPSER 169 (390)
T ss_dssp SCEEEEEEECSSBSCC------
T ss_pred CCcEEEEeeCCCCeecCccccc
Confidence 4889999999999999987654
No 57
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=47.05 E-value=10 Score=37.20 Aligned_cols=21 Identities=5% Similarity=0.026 Sum_probs=17.2
Q ss_pred ecccEEEECCC--CchHHHHHHH
Q 015139 8 VANPIVEMDGD--EMTRVFWKSI 28 (412)
Q Consensus 8 m~~~I~vi~GD--GiGpEv~~~~ 28 (412)
|+.+|++-.|| ||||||+-.+
T Consensus 1 m~~~iaIT~GDpaGIGpEii~ka 23 (328)
T 1yxo_A 1 MSLRFALTPGEPAGIGPDLCLLL 23 (328)
T ss_dssp CCCCEEEECCSTTSSHHHHHHHH
T ss_pred CCCEEEEcCCCCcchhHHHHHHH
Confidence 45569999999 9999987654
No 58
>2y3z_A 3-isopropylmalate dehydrogenase; oxidoreductase, LEUB, leucine biosynthesis; HET: 2PE; 1.83A {Thermus thermophilus} PDB: 2y40_A 2y41_A* 2y42_A* 1xaa_A 1osi_A 1hex_A 1xab_A 2ztw_A* 1g2u_A 1gc9_A 1osj_A 1ipd_A 1gc8_A 1wal_A 1dpz_A 1dr0_A 1dr8_A 1idm_A 1xac_A 1xad_A
Probab=46.97 E-value=6.6 Score=39.04 Aligned_cols=21 Identities=19% Similarity=0.099 Sum_probs=18.3
Q ss_pred CCceeecccccCCccCCccEE
Q 015139 127 TKPICIGRHAFGDQYRATDTV 147 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~v 147 (412)
..|++|+||||||.|.+.+..
T Consensus 128 ~iD~vivREnteg~Y~g~e~~ 148 (359)
T 2y3z_A 128 GVDVLIVRELTGGIYFGEPRG 148 (359)
T ss_dssp TCEEEEEEECSCSTTTCSSCE
T ss_pred CceEEEEecCccceEecCCCc
Confidence 489999999999999998643
No 59
>1lwd_A Isocitrate dehydrogenase; tricarboxylic acid cycle, oxidoreductase, NADP; HET: ICT; 1.85A {Sus scrofa} SCOP: c.77.1.1 PDB: 1t0l_A* 1t09_A* 3mas_B* 3map_A* 3mar_A* 3mas_A* 3inm_A* 2cmj_A* 2cmv_A*
Probab=46.47 E-value=5.3 Score=40.45 Aligned_cols=19 Identities=5% Similarity=-0.156 Sum_probs=16.9
Q ss_pred CccEEEecCCccceeeccC
Q 015139 143 ATDTVIQGPGKLKLVFEGK 161 (412)
Q Consensus 143 ~id~vivrenteg~y~g~~ 161 (412)
.+|++|+||||+|.|++.+
T Consensus 126 ~~divIvRe~t~g~Y~g~d 144 (413)
T 1lwd_A 126 TKPITIGRHAHGDQYKATD 144 (413)
T ss_dssp CSCEEEEEECSSGGGGCEE
T ss_pred CCceEEEecccCCccCCce
Confidence 5999999999999999753
No 60
>3udu_A 3-isopropylmalate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.85A {Campylobacter jejuni} SCOP: c.77.1.1 PDB: 3udo_A
Probab=46.38 E-value=6.1 Score=39.31 Aligned_cols=20 Identities=20% Similarity=0.122 Sum_probs=17.6
Q ss_pred CCceeecccccCCccCCccE
Q 015139 127 TKPICIGRHAFGDQYRATDT 146 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id~ 146 (412)
..|++|+||||||.|.+...
T Consensus 133 ~vD~vivREnTeG~Y~g~~~ 152 (361)
T 3udu_A 133 GVDILCVRELTGGIYFGKQD 152 (361)
T ss_dssp CCEEEEEEECSSGGGTSCEE
T ss_pred CCcEEEEcccCCCeecCccC
Confidence 48999999999999998754
No 61
>1cnz_A IPMDH, IMDH, protein (3-isopropylmalate dehydrogenase); oxidoreductase, leucine biosynthetic pathway, NAD-dependant enzyme; 1.76A {Salmonella typhimurium} SCOP: c.77.1.1 PDB: 1cm7_A
Probab=44.59 E-value=6.8 Score=39.02 Aligned_cols=19 Identities=21% Similarity=0.071 Sum_probs=17.1
Q ss_pred CCceeecccccCCccCCcc
Q 015139 127 TKPICIGRHAFGDQYRATD 145 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id 145 (412)
..|++|+||||||.|.+.+
T Consensus 131 ~vDivivREnteg~Y~g~~ 149 (363)
T 1cnz_A 131 GFDILCVRELTGGIYFGQP 149 (363)
T ss_dssp CCEEEEEEECSSGGGTCSS
T ss_pred CCCEEEEecccCCeecCCc
Confidence 4789999999999999985
No 62
>1a05_A IPMDH, IMDH, 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, leucine biosynthesis; HET: IPM; 2.00A {Acidithiobacillus ferrooxidans} SCOP: c.77.1.1
Probab=44.43 E-value=7.4 Score=38.64 Aligned_cols=19 Identities=26% Similarity=0.272 Sum_probs=17.1
Q ss_pred CCceeecccccCCccCCcc
Q 015139 127 TKPICIGRHAFGDQYRATD 145 (412)
Q Consensus 127 ~~~l~i~Re~~~~~y~~id 145 (412)
..|++|+||||||.|.+.+
T Consensus 126 ~vDivIvREnteg~Y~g~~ 144 (358)
T 1a05_A 126 DVDILVVRELTGDIYFGQP 144 (358)
T ss_dssp TCEEEEEEECSSSTTTCSS
T ss_pred CceEEEEEecCCCcccCCc
Confidence 3799999999999999874
No 63
>1zor_A Isocitrate dehydrogenase; wild type enzyme, CIS-proline, thermostable, oxidoreductase; 2.24A {Thermotoga maritima}
Probab=41.00 E-value=7.7 Score=39.09 Aligned_cols=19 Identities=5% Similarity=-0.113 Sum_probs=16.7
Q ss_pred CccEEEecCCccceeeccC
Q 015139 143 ATDTVIQGPGKLKLVFEGK 161 (412)
Q Consensus 143 ~id~vivrenteg~y~g~~ 161 (412)
.+|++|+||||+|.|++.+
T Consensus 125 ~~divi~Re~t~g~Y~g~d 143 (399)
T 1zor_A 125 KKPIIIGRHAYGDIYNAVE 143 (399)
T ss_dssp CSCCEEEECCSSGGGGCEE
T ss_pred CccceeeecccCCCcCCce
Confidence 4899999999999999753
No 64
>4aty_A Terephthalate 1,2-CIS-dihydrodiol dehydrogenase; oxidoreductase; 1.85A {Burkholderia xenovorans LB400}
Probab=36.82 E-value=21 Score=35.13 Aligned_cols=21 Identities=10% Similarity=-0.042 Sum_probs=17.7
Q ss_pred ccEEEECCC--CchHHHHHHHHH
Q 015139 10 NPIVEMDGD--EMTRVFWKSIKD 30 (412)
Q Consensus 10 ~~I~vi~GD--GiGpEv~~~~~~ 30 (412)
.+|++-.|| ||||||+-.+++
T Consensus 9 ~kIaIT~GDPaGIGpEIilKa~~ 31 (349)
T 4aty_A 9 MTVALAIGDPNGIGPEIAVKAAA 31 (349)
T ss_dssp CCEEEECCCTTSSHHHHHHHHHH
T ss_pred CeEEEECCCcchhHHHHHHHHHH
Confidence 579999999 999999876654
No 65
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=35.61 E-value=21 Score=35.04 Aligned_cols=19 Identities=11% Similarity=0.017 Sum_probs=16.1
Q ss_pred cEEEECCC--CchHHHHHHHH
Q 015139 11 PIVEMDGD--EMTRVFWKSIK 29 (412)
Q Consensus 11 ~I~vi~GD--GiGpEv~~~~~ 29 (412)
||++-.|| ||||||+-.++
T Consensus 8 ~iaIT~GDpaGIGpEii~ka~ 28 (330)
T 2hi1_A 8 TVAITMGDPAGIGPEIIVKAL 28 (330)
T ss_dssp CEEEECCCTTTTHHHHHHHHH
T ss_pred CEEEcCCCCcchhHHHHHHHH
Confidence 49999999 99999887553
No 66
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=28.95 E-value=31 Score=33.81 Aligned_cols=19 Identities=16% Similarity=0.193 Sum_probs=16.1
Q ss_pred ccEEEECCC--CchHHHHHHH
Q 015139 10 NPIVEMDGD--EMTRVFWKSI 28 (412)
Q Consensus 10 ~~I~vi~GD--GiGpEv~~~~ 28 (412)
.+|++-.|| |||||++-.+
T Consensus 9 ~~iaiT~GDpaGIGpEiilka 29 (334)
T 3lxy_A 9 NRLVITPGEPAGVGPDLAITL 29 (334)
T ss_dssp SEEEEECCCTTSSHHHHHHHH
T ss_pred CEEEEeCCCCccchHHHHHHh
Confidence 689999999 9999987544
No 67
>3tsn_A 4-hydroxythreonine-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: UNL; 2.63A {Campylobacter jejuni subsp}
Probab=28.59 E-value=25 Score=35.02 Aligned_cols=20 Identities=10% Similarity=0.023 Sum_probs=16.7
Q ss_pred ccEEEECCC--CchHHHHHHHH
Q 015139 10 NPIVEMDGD--EMTRVFWKSIK 29 (412)
Q Consensus 10 ~~I~vi~GD--GiGpEv~~~~~ 29 (412)
.+|++-.|| ||||||+-.+.
T Consensus 5 ~~iaIT~GDpaGIGpEI~~ka~ 26 (367)
T 3tsn_A 5 KKLAISIGDINSIGLEILVRSH 26 (367)
T ss_dssp CEEEEECCCTTTTHHHHHHHHH
T ss_pred CEEEEeCCCCccchHHHHHHhh
Confidence 479999999 99999986553
No 68
>3cx5_E Cytochrome B-C1 complex subunit rieske, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: b.33.1.1 f.23.12.1 PDB: 1kb9_E* 1kyo_E* 1p84_E* 2ibz_E* 1ezv_E* 3cxh_E*
Probab=22.16 E-value=38 Score=30.11 Aligned_cols=21 Identities=14% Similarity=-0.012 Sum_probs=18.3
Q ss_pred EEEccccccccccccccccCCCcccCh
Q 015139 303 IEAEAAHGTVTRHYRVHQKGGETSTNS 329 (412)
Q Consensus 303 a~FEp~HGSAp~~~~~diaGk~i~ANP 329 (412)
.+|-|.|||.- |+.|+-+ ..|
T Consensus 145 ~~~CPcHGs~F-----D~~G~v~-~gP 165 (185)
T 3cx5_E 145 GWFCPCHGSHY-----DISGRIR-KGP 165 (185)
T ss_dssp EEEETTTTEEE-----CTTCCEE-ESS
T ss_pred EEEcCCCCCEE-----CCCCCEe-cCC
Confidence 68999999998 9999887 666
No 69
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=21.98 E-value=56 Score=26.13 Aligned_cols=25 Identities=16% Similarity=0.066 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCEEEEe
Q 015139 187 ESIRAFAEASMNTAYQKKWPLYLST 211 (412)
Q Consensus 187 ~~~eRiar~AFe~A~~r~~~Vt~v~ 211 (412)
..+++.+++|.++|++.+.+|+++|
T Consensus 16 ~~s~~al~~A~~la~~~~a~l~ll~ 40 (146)
T 3s3t_A 16 DAAQAAFTEAVNIAQRHQANLTALY 40 (146)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 4688999999999998887776665
No 70
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=20.81 E-value=62 Score=25.83 Aligned_cols=26 Identities=12% Similarity=0.014 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCEEEEeC
Q 015139 187 ESIRAFAEASMNTAYQKKWPLYLSTK 212 (412)
Q Consensus 187 ~~~eRiar~AFe~A~~r~~~Vt~v~K 212 (412)
+.+++.+++|.++|++.+.+|+++|=
T Consensus 13 ~~s~~al~~A~~la~~~~a~l~ll~v 38 (147)
T 3hgm_A 13 KGAVKALEKGVGLQQLTGAELYILCV 38 (147)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 46889999999999988888887763
No 71
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=20.67 E-value=73 Score=25.92 Aligned_cols=27 Identities=15% Similarity=0.037 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEeC
Q 015139 186 DESIRAFAEASMNTAYQKKWPLYLSTK 212 (412)
Q Consensus 186 r~~~eRiar~AFe~A~~r~~~Vt~v~K 212 (412)
...+++.+++|.++|++.+.+|+++|=
T Consensus 27 s~~s~~al~~a~~la~~~~a~l~ll~v 53 (156)
T 3fg9_A 27 NTSSERAFRYATTLAHDYDVPLGICSV 53 (156)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 356899999999999998878777663
Done!