Query 015140
Match_columns 412
No_of_seqs 187 out of 802
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 07:23:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015140.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015140hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ac0_A Glucoamylase; hydrolase 99.9 4.7E-23 1.6E-27 173.2 5.9 95 8-102 4-108 (108)
2 2z0b_A GDE5, KIAA1434, putativ 99.8 8.8E-19 3E-23 153.0 12.4 98 5-103 3-120 (131)
3 2vn4_A Glucoamylase; hydrolase 99.8 9.1E-19 3.1E-23 185.5 14.1 95 9-103 495-599 (599)
4 1cyg_A Cyclodextrin glucanotra 99.7 8E-18 2.7E-22 179.1 13.6 95 9-103 578-680 (680)
5 1qho_A Alpha-amylase; glycosid 99.7 1.3E-17 4.3E-22 177.7 14.1 96 8-103 579-686 (686)
6 3bmv_A Cyclomaltodextrin gluca 99.7 2.1E-17 7.1E-22 176.0 13.6 94 9-103 582-683 (683)
7 1d3c_A Cyclodextrin glycosyltr 99.7 2.3E-17 8E-22 175.6 13.9 95 8-103 584-686 (686)
8 1vem_A Beta-amylase; beta-alph 99.7 3.4E-17 1.2E-21 171.0 11.5 93 8-101 417-516 (516)
9 1gcy_A Glucan 1,4-alpha-maltot 99.6 1.7E-16 5.7E-21 164.1 0.0 88 6-93 426-521 (527)
10 2laa_A Beta/alpha-amylase; SBD 98.0 2.1E-05 7.3E-10 66.6 7.9 77 6-92 2-82 (104)
11 1z0n_A 5'-AMP-activated protei 97.3 0.00039 1.3E-08 57.2 6.8 58 5-70 5-62 (96)
12 4aee_A Alpha amylase, catalyti 97.1 0.00091 3.1E-08 71.5 7.8 60 6-70 13-73 (696)
13 3nme_A Ptpkis1 protein, SEX4 g 96.7 0.0015 5E-08 63.3 5.7 68 10-88 169-238 (294)
14 2qlv_B Protein SIP2, protein S 96.0 0.013 4.6E-07 56.1 7.4 54 10-70 3-59 (252)
15 2c3v_A Alpha-amylase G-6; carb 95.6 0.025 8.6E-07 47.6 6.8 83 8-102 9-96 (102)
16 4aef_A Neopullulanase (alpha-a 94.9 0.04 1.4E-06 58.1 7.2 56 8-70 14-70 (645)
17 1ac0_A Glucoamylase; hydrolase 93.0 0.038 1.3E-06 45.7 2.1 29 128-156 19-47 (108)
18 1cyg_A Cyclodextrin glucanotra 92.9 0.28 9.5E-06 52.2 9.0 27 128-154 593-620 (680)
19 2z0b_A GDE5, KIAA1434, putativ 92.3 0.038 1.3E-06 47.7 1.2 40 128-169 21-60 (131)
20 1d3c_A Cyclodextrin glycosyltr 92.3 0.53 1.8E-05 50.1 10.2 27 128-154 600-627 (686)
21 3bmv_A Cyclomaltodextrin gluca 90.0 0.95 3.3E-05 48.1 9.4 27 128-154 597-624 (683)
22 1qho_A Alpha-amylase; glycosid 88.7 1 3.4E-05 48.0 8.3 36 128-169 596-638 (686)
23 2vn4_A Glucoamylase; hydrolase 74.5 1.1 3.6E-05 47.7 1.7 39 128-168 509-547 (599)
24 1ulv_A Glucodextranase; GH fam 66.3 10 0.00035 42.7 7.4 50 14-71 709-772 (1020)
25 1gcy_A Glucan 1,4-alpha-maltot 65.7 1.3 4.4E-05 45.6 0.0 27 128-154 444-470 (527)
26 1vem_A Beta-amylase; beta-alph 62.5 2.5 8.4E-05 44.2 1.4 30 127-156 432-462 (516)
27 3aml_A OS06G0726400 protein; s 59.5 23 0.00077 38.6 8.3 56 13-75 67-131 (755)
28 3swh_A MUNC13-1, protein UNC-1 58.6 7.9 0.00027 38.4 4.2 52 343-394 277-340 (341)
29 1m7x_A 1,4-alpha-glucan branch 58.3 35 0.0012 35.7 9.3 58 12-76 26-87 (617)
30 1wzl_A Alpha-amylase II; pullu 55.3 40 0.0014 34.9 9.1 65 9-79 21-95 (585)
31 4fch_A Outer membrane protein 54.8 17 0.00059 33.1 5.6 50 19-71 7-59 (221)
32 1j0h_A Neopullulanase; beta-al 52.2 21 0.00072 37.0 6.4 64 8-74 20-92 (588)
33 3k1d_A 1,4-alpha-glucan-branch 50.4 24 0.00084 38.2 6.7 58 12-76 137-198 (722)
34 3c8d_A Enterochelin esterase; 45.0 80 0.0027 30.8 9.0 64 9-73 29-101 (403)
35 4gio_A Putative lipoprotein; u 44.6 66 0.0023 26.7 7.1 76 22-99 8-89 (107)
36 2nrt_A Uvrabc system protein C 38.3 14 0.00048 34.7 2.2 75 289-390 142-219 (220)
37 1ryl_A Hypothetical protein YF 33.4 33 0.0011 30.4 3.8 20 345-364 134-153 (167)
38 3o0l_A Uncharacterized protein 33.0 88 0.003 26.1 6.1 73 25-99 13-92 (112)
39 3r0s_A Acyl-[acyl-carrier-prot 29.2 82 0.0028 29.0 5.9 47 343-392 206-252 (266)
40 3ukn_A Novel protein similar t 27.7 29 0.00098 30.0 2.3 46 298-343 58-108 (212)
41 2lnh_A N-WAsp, neural wiskott- 27.3 9.7 0.00033 29.4 -0.7 37 356-397 25-61 (65)
42 3l9o_A ATP-dependent RNA helic 26.8 1.4E+02 0.0049 33.7 8.3 102 286-394 796-922 (1108)
43 4a4z_A Antiviral helicase SKI2 25.7 65 0.0022 36.0 5.2 109 281-396 678-809 (997)
44 2qia_A UDP-N-acetylglucosamine 25.2 79 0.0027 28.7 4.9 49 342-392 206-255 (262)
45 2ptm_A Hyperpolarization-activ 25.2 25 0.00087 30.0 1.5 44 300-343 55-104 (198)
46 3odn_A Dally-like protein; alp 24.4 45 0.0015 35.0 3.4 150 240-398 113-313 (506)
47 3bpz_A Potassium/sodium hyperp 23.9 23 0.00079 30.4 1.0 45 299-343 55-105 (202)
48 3kkc_A TETR family transcripti 23.8 1.1E+02 0.0039 24.5 5.2 37 288-324 31-78 (177)
49 3isy_A Bsupi, intracellular pr 22.5 3E+02 0.01 23.3 7.6 50 53-104 33-89 (120)
50 2p22_C Protein SRN2; endosome, 21.6 50 0.0017 30.3 2.7 68 325-400 91-164 (192)
51 4fqn_A Malcavernin; helical do 20.6 2E+02 0.0068 23.9 5.9 77 303-393 15-91 (98)
52 2lm0_A AF4/FMR2 family member 20.5 1.1E+02 0.0037 26.5 4.4 55 339-393 52-122 (125)
No 1
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=99.87 E-value=4.7e-23 Score=173.21 Aligned_cols=95 Identities=27% Similarity=0.648 Sum_probs=86.7
Q ss_pred CCeEEEEEEEEeecCCCCEEEEEeCCCCcCCCC--ccccCeee----CC-cEEEEEEecCCceEEEEEEEEeCCCceEEe
Q 015140 8 GGNVRISFRLDHQVEFGEHVVILGSTKELGSWK--KNVPMKWS----ES-GWLCDLEFKGGESIEYKFVIVRNDKSKAWE 80 (412)
Q Consensus 8 ~~~v~V~F~I~yqT~~GE~V~VvGS~~eLGnWd--kAv~Ms~t----dg-~W~veV~lp~gt~~EYKYvI~d~~g~veWE 80 (412)
++.|.|+|+|++.|.+||+|+|+||+++||+|+ ++++|++. ++ .|+++|++|.+..|||||+|.+.++.+.||
T Consensus 4 ~~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~v~~~~g~~~WE 83 (108)
T 1ac0_A 4 PTAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIRIESDDSVEWE 83 (108)
T ss_dssp CCCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSSSSSSCSSCEEEECCCSSSCEECCCEECCSSSCCCCC
T ss_pred CCeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccccCCcCCeEEEEEEeCCCCeEEEEEEEEcCCCCEEec
Confidence 467999999999999999999999999999999 89999987 44 999999999999999999998766777899
Q ss_pred cCCCceEEcCCCC---eEEEEEEeC
Q 015140 81 AGDNRILKLPKGG---SFEIVCHWN 102 (412)
Q Consensus 81 ~G~NR~L~lp~~~---s~~V~D~W~ 102 (412)
+|+||.+.+|.+. .++|.|+|+
T Consensus 84 ~g~nR~~~~p~~~~~~~~~v~d~W~ 108 (108)
T 1ac0_A 84 SDPNREYTVPQACGTSTATVTDTWR 108 (108)
T ss_dssp CSSCCEECCCSSSSCSCCEEEEECC
T ss_pred cCCCEEEECCCCCCccEEEEEEEeC
Confidence 9999999999853 689999995
No 2
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=99.78 E-value=8.8e-19 Score=153.03 Aligned_cols=98 Identities=23% Similarity=0.408 Sum_probs=82.3
Q ss_pred CCCCCeEEEEEEEEeecCCCCEEEEEeCCCCcCCCC--ccccCeee----CC-cEEEEEEecCCceEEEEEEE---EeC-
Q 015140 5 SGHGGNVRISFRLDHQVEFGEHVVILGSTKELGSWK--KNVPMKWS----ES-GWLCDLEFKGGESIEYKFVI---VRN- 73 (412)
Q Consensus 5 ~g~~~~v~V~F~I~yqT~~GE~V~VvGS~~eLGnWd--kAv~Ms~t----dg-~W~veV~lp~gt~~EYKYvI---~d~- 73 (412)
.|.++.+.|+|+|.+.|.+||.|+|+||+++||+|+ +|++|++. ++ .|+++|++|.++.|||||+| .+.
T Consensus 3 ~~s~~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi~~~~~~~ 82 (131)
T 2z0b_A 3 SGSSGPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFKGYFLEPK 82 (131)
T ss_dssp ---CCCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECCTTCCSSEEEEEEEECTTCCEEEEEEEEEEECCC
T ss_pred CCCCCeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccccCCCCCeEEEEEEcCCCCcEEEEEEEEeecCcc
Confidence 467788999999999999999999999999999999 89999998 54 99999999999999999999 653
Q ss_pred -C-C--ce---EEecCC-CceEEcCCCCeEEEEE-EeCC
Q 015140 74 -D-K--SK---AWEAGD-NRILKLPKGGSFEIVC-HWNK 103 (412)
Q Consensus 74 -~-g--~v---eWE~G~-NR~L~lp~~~s~~V~D-~W~~ 103 (412)
+ + .+ .||+++ ||.+.++. ....+.| .++.
T Consensus 83 ~~~g~~~v~~~~WE~g~~NR~l~~~~-~~~~~~Dg~FG~ 120 (131)
T 2z0b_A 83 TIGGPCQVIVHKWETHLQPRSITPLE-SEIIIDDGQFGI 120 (131)
T ss_dssp C----CEEEEEEECCSSCCEEECCCS-SEEEEEEEETTC
T ss_pred ccCCccccceeeECCCCCCcEEecCC-CceEeecccCcc
Confidence 2 2 23 999999 99999886 4567777 6764
No 3
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=99.78 E-value=9.1e-19 Score=185.55 Aligned_cols=95 Identities=24% Similarity=0.534 Sum_probs=88.6
Q ss_pred CeEEEEEEEEeecCCCCEEEEEeCCCCcCCCC--ccccCeeeC-----CcEEEEEEecCCceEEEEEEEEeCCCceEEec
Q 015140 9 GNVRISFRLDHQVEFGEHVVILGSTKELGSWK--KNVPMKWSE-----SGWLCDLEFKGGESIEYKFVIVRNDKSKAWEA 81 (412)
Q Consensus 9 ~~v~V~F~I~yqT~~GE~V~VvGS~~eLGnWd--kAv~Ms~td-----g~W~veV~lp~gt~~EYKYvI~d~~g~veWE~ 81 (412)
.+|.|+|+|+++|.+||+|+|+||+++||+|+ ++++|++++ +.|+++|++|.++.|||||+|++.++.+.||+
T Consensus 495 ~~v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~~t~~~~~W~~~v~lp~~~~~eYKyvv~~~~g~~~WE~ 574 (599)
T 2vn4_A 495 TSVAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVNYADNHPLWIGTVNLEAGDVVEYKYINVGQDGSVTWES 574 (599)
T ss_dssp SEEEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTTCBTTBCEEEEEEEEETTCEEEEEEEEECTTCCEEECC
T ss_pred CeEEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeecccccCCCCCCcEEEEEEcCCCCcEEEEEEEECCCCceEeCC
Confidence 46999999999999999999999999999999 999999987 49999999999999999999998777889999
Q ss_pred CCCceEEcCCC---CeEEEEEEeCC
Q 015140 82 GDNRILKLPKG---GSFEIVCHWNK 103 (412)
Q Consensus 82 G~NR~L~lp~~---~s~~V~D~W~~ 103 (412)
|+||.+.+|.. ..++|.|+|++
T Consensus 575 g~NR~~~~p~~~~~~~~~v~d~W~~ 599 (599)
T 2vn4_A 575 DPNHTYTVPAVACVTQVVKEDTWQS 599 (599)
T ss_dssp SSCEEEECCCCTTCCEEEEEEECCC
T ss_pred CCCEEEecCcccCCceEEEEEEecC
Confidence 99999999986 68999999974
No 4
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=99.74 E-value=8e-18 Score=179.05 Aligned_cols=95 Identities=27% Similarity=0.663 Sum_probs=88.6
Q ss_pred CeEEEEEEEEe-ecCCCCEEEEEeCCCCcCCCC--ccc-cCee---eCC-cEEEEEEecCCceEEEEEEEEeCCCceEEe
Q 015140 9 GNVRISFRLDH-QVEFGEHVVILGSTKELGSWK--KNV-PMKW---SES-GWLCDLEFKGGESIEYKFVIVRNDKSKAWE 80 (412)
Q Consensus 9 ~~v~V~F~I~y-qT~~GE~V~VvGS~~eLGnWd--kAv-~Ms~---tdg-~W~veV~lp~gt~~EYKYvI~d~~g~veWE 80 (412)
+++.|+|+|++ +|.+||+|+|+||+++||+|+ +|+ +|.+ .++ .|+++|++|.++.|||||++++.++.+.||
T Consensus 578 ~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~v~~~~~~~~~WE 657 (680)
T 1cyg_A 578 DQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQVVYSYPTWYIDVSVPEGKTIEFKFIKKDSQGNVTWE 657 (680)
T ss_dssp CEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSSSSCTTCEEEEEEEESSCEEEEEEEEECTTSCEEEC
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCcEEEEEEeCCCCcEEEEEEEEeCCCCeEeC
Confidence 57899999987 899999999999999999999 899 9998 555 999999999999999999999988889999
Q ss_pred cCCCceEEcCCCCeEEEEEEeCC
Q 015140 81 AGDNRILKLPKGGSFEIVCHWNK 103 (412)
Q Consensus 81 ~G~NR~L~lp~~~s~~V~D~W~~ 103 (412)
+|+||++.+|..+..+|.|.|++
T Consensus 658 ~g~Nr~~~~~~~~~~~~~~~W~~ 680 (680)
T 1cyg_A 658 SGSNHVYTTPTNTTGKIIVDWQN 680 (680)
T ss_dssp CSSCEEEECCSSSCEEEEEECCC
T ss_pred CCCCeeEECCCCCcEEEEEecCC
Confidence 99999999999888899999974
No 5
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=99.73 E-value=1.3e-17 Score=177.66 Aligned_cols=96 Identities=26% Similarity=0.641 Sum_probs=88.4
Q ss_pred CCeEEEEEEEEee-cC-CCCEEEEEeCCCCcCCCCc--------cc-cCeeeCC-cEEEEEEecCCceEEEEEEEEeCCC
Q 015140 8 GGNVRISFRLDHQ-VE-FGEHVVILGSTKELGSWKK--------NV-PMKWSES-GWLCDLEFKGGESIEYKFVIVRNDK 75 (412)
Q Consensus 8 ~~~v~V~F~I~yq-T~-~GE~V~VvGS~~eLGnWdk--------Av-~Ms~tdg-~W~veV~lp~gt~~EYKYvI~d~~g 75 (412)
+++|.|+|+|++. |. +||+|+|+||+++||+|+. ++ +|.++++ .|+++|++|.++.|||||+|++.++
T Consensus 579 ~~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~~~~~~W~~~v~l~~~~~~eyKy~~~~~~~ 658 (686)
T 1qho_A 579 GTQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLAPNYPDWFYVFSVPAGKTIQFKFFIKRADG 658 (686)
T ss_dssp SSEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBCTTTTSEEEEEEEETTCEEEEEEEEECTTS
T ss_pred CCeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhcccccCCCCcEEEEEEeCCCCeEEEEEEEEcCCC
Confidence 4679999999985 87 9999999999999999984 78 8998886 9999999999999999999998888
Q ss_pred ceEEecCCCceEEcCCCCeEEEEEEeCC
Q 015140 76 SKAWEAGDNRILKLPKGGSFEIVCHWNK 103 (412)
Q Consensus 76 ~veWE~G~NR~L~lp~~~s~~V~D~W~~ 103 (412)
.++||+|+||.+.+|.+++++|.|+|++
T Consensus 659 ~~~We~~~nr~~~~~~~~~~~v~d~W~~ 686 (686)
T 1qho_A 659 TIQWENGSNHVATTPTGATGNITVTWQN 686 (686)
T ss_dssp CEEECCSSCEEEECCSSSEEEEEEECCC
T ss_pred CEEeCCCCCeeEECCCCccEEEEeEccC
Confidence 8899999999999999888999999974
No 6
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=99.72 E-value=2.1e-17 Score=175.96 Aligned_cols=94 Identities=26% Similarity=0.673 Sum_probs=87.5
Q ss_pred CeEEEEEEEEe-ecCCCCEEEEEeCCCCcCCCC--ccc-cCee---eCC-cEEEEEEecCCceEEEEEEEEeCCCceEEe
Q 015140 9 GNVRISFRLDH-QVEFGEHVVILGSTKELGSWK--KNV-PMKW---SES-GWLCDLEFKGGESIEYKFVIVRNDKSKAWE 80 (412)
Q Consensus 9 ~~v~V~F~I~y-qT~~GE~V~VvGS~~eLGnWd--kAv-~Ms~---tdg-~W~veV~lp~gt~~EYKYvI~d~~g~veWE 80 (412)
+++.|+|+|++ +|.+||+|+|+||+++||+|+ +|+ +|.+ +++ .|+++|++|.++.|||||++++.+ .+.||
T Consensus 582 ~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~~~~~-~~~WE 660 (683)
T 3bmv_A 582 NQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQVVYQYPTWYYDVSVPAGTTIQFKFIKKNGN-TITWE 660 (683)
T ss_dssp SEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSSSSCTTSEEEEEEEETTCEEEEEEEEESSS-CCEEC
T ss_pred CeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccCCCCCCcEEEEEEeCCCCcEEEEEEEEcCC-ceEec
Confidence 57899999987 999999999999999999999 999 9998 555 999999999999999999999876 88999
Q ss_pred cCCCceEEcCCCCeEEEEEEeCC
Q 015140 81 AGDNRILKLPKGGSFEIVCHWNK 103 (412)
Q Consensus 81 ~G~NR~L~lp~~~s~~V~D~W~~ 103 (412)
+|+||++.+|..+..++.+.|++
T Consensus 661 ~g~Nr~~~~~~~~~~~~~~~W~~ 683 (683)
T 3bmv_A 661 GGSNHTYTVPSSSTGTVIVNWQQ 683 (683)
T ss_dssp CSSCEEEECCSSSCEEEEEECCC
T ss_pred CCCCeeEECCCCCceEEEeecCC
Confidence 99999999999888899999974
No 7
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=99.72 E-value=2.3e-17 Score=175.62 Aligned_cols=95 Identities=31% Similarity=0.712 Sum_probs=87.6
Q ss_pred CCeEEEEEEEEe-ecCCCCEEEEEeCCCCcCCCC--ccc-cCee---eCC-cEEEEEEecCCceEEEEEEEEeCCCceEE
Q 015140 8 GGNVRISFRLDH-QVEFGEHVVILGSTKELGSWK--KNV-PMKW---SES-GWLCDLEFKGGESIEYKFVIVRNDKSKAW 79 (412)
Q Consensus 8 ~~~v~V~F~I~y-qT~~GE~V~VvGS~~eLGnWd--kAv-~Ms~---tdg-~W~veV~lp~gt~~EYKYvI~d~~g~veW 79 (412)
++++.|+|+|++ +|.+||+|+|+||+++||+|+ +|+ +|.+ .++ .|+++|++|.++.|||||++++.+ .+.|
T Consensus 584 ~~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~~~~~-~~~W 662 (686)
T 1d3c_A 584 GDQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGS-TVTW 662 (686)
T ss_dssp SSEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSSSSCTTCEEEEEEEETTCEEEEEEEEEETT-EEEE
T ss_pred CCeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCeEEEEEEeCCCCcEEEEEEEEcCC-ceEe
Confidence 357999999987 799999999999999999999 999 8998 555 999999999999999999999876 7899
Q ss_pred ecCCCceEEcCCCCeEEEEEEeCC
Q 015140 80 EAGDNRILKLPKGGSFEIVCHWNK 103 (412)
Q Consensus 80 E~G~NR~L~lp~~~s~~V~D~W~~ 103 (412)
|+|+||++.+|..+..+|.|.|++
T Consensus 663 E~g~Nr~~~~~~~~~~~~~~~W~~ 686 (686)
T 1d3c_A 663 EGGSNHTFTAPSSGTATINVNWQP 686 (686)
T ss_dssp CCSSCEEEECCSSSCEEEEEECCC
T ss_pred cCCCCeEEECCCCCcEEEEEecCC
Confidence 999999999999888899999974
No 8
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=99.70 E-value=3.4e-17 Score=170.96 Aligned_cols=93 Identities=22% Similarity=0.434 Sum_probs=84.7
Q ss_pred CCeEEEEEEEEe-ecCCCCEEEEEeCCCCcCCCC--cc-ccCeee-CC-cEEEEEEecCCceEEEEEEEEeCCCce-EEe
Q 015140 8 GGNVRISFRLDH-QVEFGEHVVILGSTKELGSWK--KN-VPMKWS-ES-GWLCDLEFKGGESIEYKFVIVRNDKSK-AWE 80 (412)
Q Consensus 8 ~~~v~V~F~I~y-qT~~GE~V~VvGS~~eLGnWd--kA-v~Ms~t-dg-~W~veV~lp~gt~~EYKYvI~d~~g~v-eWE 80 (412)
+.+|.|+|+|++ +|.+||+|+|+||+++||+|+ ++ ++|++. ++ .|+++|++|.++.|||||+|++.++.+ +||
T Consensus 417 ~~~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~~~p~~W~~~v~lp~~~~~eYKyv~~~~~g~v~~WE 496 (516)
T 1vem_A 417 VTPVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYDSHSNDWRGNVVLPAERNIEFKAFIKSKDGTVKSWQ 496 (516)
T ss_dssp CCEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEETTTTEEEEEEEEETTCCEEEEEEEECTTSCEEEEC
T ss_pred cCccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccCCCCCEEEEEEEECCCCcEEEEEEEEeCCCCeeEEe
Confidence 467999999987 899999999999999999999 88 699884 56 999999999999999999999888888 999
Q ss_pred cCCCceEEcCCCCeEEEEEEe
Q 015140 81 AGDNRILKLPKGGSFEIVCHW 101 (412)
Q Consensus 81 ~G~NR~L~lp~~~s~~V~D~W 101 (412)
+|+||.+.+|..+ .+++++|
T Consensus 497 ~g~NR~~~~p~~~-~~~~~~w 516 (516)
T 1vem_A 497 TIQQSWNPVPLKT-TSHTSSW 516 (516)
T ss_dssp SSCEEESSCCSSC-CEEEEEC
T ss_pred CCCCEEEecCCCC-CeEEeeC
Confidence 9999999999866 6888888
No 9
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=99.57 E-value=1.7e-16 Score=164.08 Aligned_cols=88 Identities=25% Similarity=0.542 Sum_probs=0.0
Q ss_pred CCCCeEEEEEEE-EeecCCCCEEEEEeCCCCcCCCC--ccccCee-eCC-cEEEEEEecCCceEEEEEEEEeCCC---ce
Q 015140 6 GHGGNVRISFRL-DHQVEFGEHVVILGSTKELGSWK--KNVPMKW-SES-GWLCDLEFKGGESIEYKFVIVRNDK---SK 77 (412)
Q Consensus 6 g~~~~v~V~F~I-~yqT~~GE~V~VvGS~~eLGnWd--kAv~Ms~-tdg-~W~veV~lp~gt~~EYKYvI~d~~g---~v 77 (412)
|.+++|.|+|+| +++|.+||+|+|+||+++||+|+ ++++|++ .++ .|+++|++|.++.|||||+|++.++ .+
T Consensus 426 ~~~~~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~~~~~~W~~~v~lp~~~~~eyKy~~~~~~~~~~~~ 505 (527)
T 1gcy_A 426 EPGALVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDTSGYPTWKGSIALPAGQNEEWKCLIRNEANATQVR 505 (527)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCCEEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccCCCCCeEEEEEEeCCCCcEEEEEEEEeCCCCccee
Confidence 345689999999 89999999999999999999999 9999997 454 9999999999999999999987643 47
Q ss_pred EEecCCCceEEcCCCC
Q 015140 78 AWEAGDNRILKLPKGG 93 (412)
Q Consensus 78 eWE~G~NR~L~lp~~~ 93 (412)
+||+|+||.+.+|.++
T Consensus 506 ~We~g~nr~~~~~~~~ 521 (527)
T 1gcy_A 506 QWQGGANNSLTPSEGA 521 (527)
T ss_dssp ----------------
T ss_pred EecCCCCeeEECCCCc
Confidence 9999999999998744
No 10
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=97.95 E-value=2.1e-05 Score=66.56 Aligned_cols=77 Identities=26% Similarity=0.514 Sum_probs=61.2
Q ss_pred CCCCeEEEEEEEEeecCCCCEEEEEeCCCCcCCCC--ccccCeeeC-CcE-EEEEEecCCceEEEEEEEEeCCCceEEec
Q 015140 6 GHGGNVRISFRLDHQVEFGEHVVILGSTKELGSWK--KNVPMKWSE-SGW-LCDLEFKGGESIEYKFVIVRNDKSKAWEA 81 (412)
Q Consensus 6 g~~~~v~V~F~I~yqT~~GE~V~VvGS~~eLGnWd--kAv~Ms~td-g~W-~veV~lp~gt~~EYKYvI~d~~g~veWE~ 81 (412)
|.+..++|.++ ..+ ++++|-.. +++|+|+ .+++|+.+. ..| +.+|++|.++.|+|+| .++...||+
T Consensus 2 ~~g~~vtiyY~----~g~-~~vylHyg-~~~g~Wt~~~~v~M~~~~~~gw~~~TI~l~~g~~~~~~F----~dG~~~WDN 71 (104)
T 2laa_A 2 GTGNKVTIYYK----KGF-NSPYIHYR-PAGGSWTAAPGVKMQDAEISGYAKITVDIGSASQLEAAF----NDGNNNWDS 71 (104)
T ss_dssp CCCCEEEEEEE----CSS-SSCEEEEE-ETTSCCCSSSCEECEEETTTTEEEEEEECTTCSCEEEEE----ECSSSCEES
T ss_pred CCCCEEEEEEc----CCC-CcEEEEEc-CCCCCCCcCCccccccccCCCeEEEEEECCCCCEEEEEE----eCCCCcCcC
Confidence 44556666665 343 68888877 7889999 999998886 578 5999999888999999 256678999
Q ss_pred CCCceEEcCCC
Q 015140 82 GDNRILKLPKG 92 (412)
Q Consensus 82 G~NR~L~lp~~ 92 (412)
..+|.+.++.+
T Consensus 72 n~g~Nyt~~~g 82 (104)
T 2laa_A 72 NNTKNYSFSTG 82 (104)
T ss_dssp TTTSCEEECSE
T ss_pred CCCccEEecCC
Confidence 99999998753
No 11
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=97.35 E-value=0.00039 Score=57.18 Aligned_cols=58 Identities=26% Similarity=0.529 Sum_probs=44.5
Q ss_pred CCCCCeEEEEEEEEeecCCCCEEEEEeCCCCcCCCCccccCeeeCCcEEEEEEecCCceEEEEEEE
Q 015140 5 SGHGGNVRISFRLDHQVEFGEHVVILGSTKELGSWKKNVPMKWSESGWLCDLEFKGGESIEYKFVI 70 (412)
Q Consensus 5 ~g~~~~v~V~F~I~yqT~~GE~V~VvGS~~eLGnWdkAv~Ms~tdg~W~veV~lp~gt~~EYKYvI 70 (412)
..+...+.++|... .-+++|.|+|+ +.+|+ .++|...+|.|++.+.+|.| ..+|||+|
T Consensus 5 ~~~~~~~~v~F~wa---p~a~~V~v~Gd---Fn~W~-~~~m~~~~g~w~~~v~l~~G-~~~YKf~V 62 (96)
T 1z0n_A 5 KAPAQARPTVFRWT---GGGKEVYLSGS---FNNWS-KLPMTRSQNNFVAILDLPEG-EHQYKFFV 62 (96)
T ss_dssp -----CEEEEEEEC---SCCSCEEEEEG---GGTTC-CEECEEETTEEEEEEEECSE-EEEEEEEE
T ss_pred cCCCCceEEEEEEC---CCCcEEEEEEE---eCCCc-cccCEECCCEEEEEEEccCC-CEEEEEEE
Confidence 34566788888443 45899999998 56898 88999877899999999887 47999998
No 12
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=97.06 E-value=0.00091 Score=71.49 Aligned_cols=60 Identities=20% Similarity=0.339 Sum_probs=51.8
Q ss_pred CCCCeEEEEEEEEeecCCCCEEEEEeCCCCcCCCC-ccccCeeeCCcEEEEEEecCCceEEEEEEE
Q 015140 6 GHGGNVRISFRLDHQVEFGEHVVILGSTKELGSWK-KNVPMKWSESGWLCDLEFKGGESIEYKFVI 70 (412)
Q Consensus 6 g~~~~v~V~F~I~yqT~~GE~V~VvGS~~eLGnWd-kAv~Ms~tdg~W~veV~lp~gt~~EYKYvI 70 (412)
|.++.+.|+|++.. ...+++|+|+|+ +-+|+ ...+|...+|.|++.++||.| ..+|||+|
T Consensus 13 ~~~~~~~v~f~~~~-~~~~~~v~~~G~---Fn~w~~~~~~~~~~~~~~~~~~~L~~g-~~~y~f~v 73 (696)
T 4aee_A 13 GRKGRYIVKFTRHW-PQYAKNIYLIGE---FTSLYPGFVKLRKIEEQGIVYLKLWPG-EYGYGFQI 73 (696)
T ss_dssp TEEEEEEEEEEEEC-CTTCSCEEEEET---TSCSSTTSCBCEEETTEEEEEEEECSE-EEEEEEEE
T ss_pred CCCCcEEEEEEEEC-CCCCcEEEEEEe---cCCCCCCCcceEecCCeEEEEEEcCCc-eEEEEEEE
Confidence 45567899999944 447899999999 78898 889999888899999999998 69999988
No 13
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=96.75 E-value=0.0015 Score=63.32 Aligned_cols=68 Identities=21% Similarity=0.442 Sum_probs=51.0
Q ss_pred eEEEEEEEEeecCCCCEEEEEeCCCCcCCCCccccCeeeC--CcEEEEEEecCCceEEEEEEEEeCCCceEEecCCCceE
Q 015140 10 NVRISFRLDHQVEFGEHVVILGSTKELGSWKKNVPMKWSE--SGWLCDLEFKGGESIEYKFVIVRNDKSKAWEAGDNRIL 87 (412)
Q Consensus 10 ~v~V~F~I~yqT~~GE~V~VvGS~~eLGnWdkAv~Ms~td--g~W~veV~lp~gt~~EYKYvI~d~~g~veWE~G~NR~L 87 (412)
+..++|..... .|+.|+|+|+ +-+|++.++|.... |.|++++.+|.|. ++|||+|. | .|-..++-..
T Consensus 169 k~~v~f~~~~~--~~~~V~v~Gs---F~~W~~~~~l~k~~~~g~~~~~~~L~~G~-y~YkFiVD---G--~w~~d~~~~~ 237 (294)
T 3nme_A 169 RKTVTLTLKDK--GFSRVEISGL---DIGWGQRIPLTLGKGTGFWILKRELPEGQ-FEYKYIID---G--EWTHNEAEPF 237 (294)
T ss_dssp CEEEEEEEECS--SCSCEEEEET---TTEEEEEEECEECTTTCEEEEEEEECSEE-EEEEEEET---T--EEECCTTSCE
T ss_pred cccceeeeccC--CCCEEEEEEe---ccCCCCcccceEcCCCCEEEEEEECCCce-EEEEEEEC---C--EEeeCCCCCe
Confidence 45677776433 7899999997 66798789999854 5999999999875 99999773 2 4866555443
Q ss_pred E
Q 015140 88 K 88 (412)
Q Consensus 88 ~ 88 (412)
.
T Consensus 238 ~ 238 (294)
T 3nme_A 238 I 238 (294)
T ss_dssp E
T ss_pred e
Confidence 3
No 14
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=95.97 E-value=0.013 Score=56.10 Aligned_cols=54 Identities=20% Similarity=0.450 Sum_probs=42.7
Q ss_pred eEEEEEEEEeecCCCCEEEEEeCCCCcCCCCccccCeee---CCcEEEEEEecCCceEEEEEEE
Q 015140 10 NVRISFRLDHQVEFGEHVVILGSTKELGSWKKNVPMKWS---ESGWLCDLEFKGGESIEYKFVI 70 (412)
Q Consensus 10 ~v~V~F~I~yqT~~GE~V~VvGS~~eLGnWdkAv~Ms~t---dg~W~veV~lp~gt~~EYKYvI 70 (412)
.+.++|.- ..-|+.|+|+|+ +-+|+..++|... +|.|++++.+|.|. ++|||+|
T Consensus 3 ~vpv~f~W---~~~a~~V~V~Gs---F~~W~~~~~m~k~~~~~G~f~~tv~LppG~-y~YKFiV 59 (252)
T 2qlv_B 3 MVPVEIRW---QQGGSKVYVTGS---FTKWRKMIGLIPDSDNNGSFHVKLRLLPGT-HRFRFIV 59 (252)
T ss_dssp CEEEEEEE---CSCCSCEEEEEG---GGTTSSCEECEECSSSTTCEEEEEEECSEE-EEEEEEE
T ss_pred cEEEEEEE---eCCCcEEEEEEE---eCCCcCcccceeccCCCCcEEEEEECCCCE-EEEEEEE
Confidence 45666654 347899999998 5689866899873 25999999999874 9999987
No 15
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=95.63 E-value=0.025 Score=47.57 Aligned_cols=83 Identities=18% Similarity=0.374 Sum_probs=56.3
Q ss_pred CCeEEEEEEEEeecCCCCE-EEEEeCCCCcCCCC--ccccCeeeC--CcEEEEEEecCCceEEEEEEEEeCCCceEEecC
Q 015140 8 GGNVRISFRLDHQVEFGEH-VVILGSTKELGSWK--KNVPMKWSE--SGWLCDLEFKGGESIEYKFVIVRNDKSKAWEAG 82 (412)
Q Consensus 8 ~~~v~V~F~I~yqT~~GE~-V~VvGS~~eLGnWd--kAv~Ms~td--g~W~veV~lp~gt~~EYKYvI~d~~g~veWE~G 82 (412)
+..+.|.++ ..+.+. |.. | +..|+|. .+++|.... |.|+.+|+++.++.|+|+| .++...|++.
T Consensus 9 g~~vTvyY~----sg~~~~ylHy-~--~~~g~Wt~vpgv~M~~~~~~Gw~~~TI~~~~~~~l~~~F----~dG~~~WDNN 77 (102)
T 2c3v_A 9 ATDITIYYK----TGWTHPHIHY-S--LNQGAWTTLPGVPLTKSEXEGXVKVTIEAEEGSQLRAAF----NNGSGQWDNN 77 (102)
T ss_dssp CCSEEEEEE----CCCSSCEEEE-E--ETTCCBCCTTCEECEECSSTTEEEEEECCCTTCEEEEEE----ECSSSCEECG
T ss_pred CCEEEEEEc----CCCCcEEEEE-e--CCCCCcccCCCcCccccccCCceEEEEecCCCceEEEEE----eCCCcccccC
Confidence 345666655 455443 332 2 4458999 999998753 4568999999888999999 3455689988
Q ss_pred CCceEEcCCCCeEEEEEEeC
Q 015140 83 DNRILKLPKGGSFEIVCHWN 102 (412)
Q Consensus 83 ~NR~L~lp~~~s~~V~D~W~ 102 (412)
.++.+.++.+ ..+|.|.|.
T Consensus 78 ~g~Ny~~~~g-~~tv~~g~~ 96 (102)
T 2c3v_A 78 QGRDYDFSSG-VHTLADGRI 96 (102)
T ss_dssp GGTCEEEESE-EEEEETTEE
T ss_pred CCcceEECCC-cEEEeCCEE
Confidence 7788887543 345665443
No 16
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=94.90 E-value=0.04 Score=58.09 Aligned_cols=56 Identities=21% Similarity=0.438 Sum_probs=46.1
Q ss_pred CCeEEEEEEEEeecCCCCEEEEEeCCCCcCCCC-ccccCeeeCCcEEEEEEecCCceEEEEEEE
Q 015140 8 GGNVRISFRLDHQVEFGEHVVILGSTKELGSWK-KNVPMKWSESGWLCDLEFKGGESIEYKFVI 70 (412)
Q Consensus 8 ~~~v~V~F~I~yqT~~GE~V~VvGS~~eLGnWd-kAv~Ms~tdg~W~veV~lp~gt~~EYKYvI 70 (412)
++...|.|.+. .-|+.++|+|+ +.+|+ ...+|+..++.|.++|+||+|. .+|||+|
T Consensus 14 ~~~~~~~~~~~---~~~~~~yl~G~---Fn~w~~~~~~m~~~g~~~~~~v~L~~G~-y~Y~f~v 70 (645)
T 4aef_A 14 GRVAEVEFSLI---REGSYAYLLGD---FNAFNEGSFRMEQEGKNWKIKIALPEGV-WHYAFSI 70 (645)
T ss_dssp EEEEEEEEEEE---CCSSCEEEEET---TTTTCTTSSEEEECSSEEEEEEEECSEE-EEEEEEE
T ss_pred ceEEEEEEecC---CCCeEEEEEEc---CCCCCCCcccceEcCCEEEEEEEeCCce-EEEEEEE
Confidence 34467777763 45789999999 78999 7889988777999999999985 8999988
No 17
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=93.05 E-value=0.038 Score=45.69 Aligned_cols=29 Identities=21% Similarity=0.431 Sum_probs=26.2
Q ss_pred ccccccccCCCCccCCCCCCcceeeecCC
Q 015140 128 APDALLEVGTSPFVGQWQGKSASFMRADD 156 (412)
Q Consensus 128 l~~~L~l~Gss~~LG~W~~~kA~~M~~~n 156 (412)
.++.++++|+.+.||+|+.++|++|...+
T Consensus 19 ~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~ 47 (108)
T 1ac0_A 19 YGENIYLVGSISQLGDWETSDGIALSADK 47 (108)
T ss_dssp SSCCEECCCSSSTTCSSSGGGSCCBBCSS
T ss_pred CCCEEEEEeCcHHHCCCCHHHCccccccc
Confidence 37788999999999999999999998864
No 18
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=92.88 E-value=0.28 Score=52.18 Aligned_cols=27 Identities=22% Similarity=0.265 Sum_probs=24.9
Q ss_pred ccccccccCCCCccCCCCCCcce-eeec
Q 015140 128 APDALLEVGTSPFVGQWQGKSAS-FMRA 154 (412)
Q Consensus 128 l~~~L~l~Gss~~LG~W~~~kA~-~M~~ 154 (412)
.++.++++|+.+.||+|++++|+ +|..
T Consensus 593 ~ge~v~v~G~~~~LG~W~~~~a~~~l~~ 620 (680)
T 1cyg_A 593 LGQNIYIVGNVYELGNWDTSKAIGPMFN 620 (680)
T ss_dssp SSCEEEEEESSGGGBTTCGGGCBCCCBC
T ss_pred CCCEEEEEeCcHHhCCCChhhhhhhhcc
Confidence 37788999999999999999999 9987
No 19
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=92.30 E-value=0.038 Score=47.69 Aligned_cols=40 Identities=13% Similarity=0.360 Sum_probs=30.9
Q ss_pred ccccccccCCCCccCCCCCCcceeeecCCCcccccccccccc
Q 015140 128 APDALLEVGTSPFVGQWQGKSASFMRADDHWNREMERKWDTS 169 (412)
Q Consensus 128 l~~~L~l~Gss~~LG~W~~~kA~~M~~~n~~~~~~~~~wdt~ 169 (412)
.++.++++|+.+.||+|+.++|++|...+-.+ ....|-.+
T Consensus 21 ~ge~v~vvGs~~~LG~W~p~~av~L~~~~~~~--~~~~W~~~ 60 (131)
T 2z0b_A 21 PGEVFAICGSCDALGNWNPQNAVALLPENDTG--ESMLWKAT 60 (131)
T ss_dssp TTCEEEEEESSGGGTTTCGGGCEECEECCTTC--CSSEEEEE
T ss_pred CCCEEEEEeCCCcCCCCCccccccccccccCC--CCCeEEEE
Confidence 37788999999999999999999999874111 24567653
No 20
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=92.27 E-value=0.53 Score=50.07 Aligned_cols=27 Identities=19% Similarity=0.270 Sum_probs=24.9
Q ss_pred ccccccccCCCCccCCCCCCcce-eeec
Q 015140 128 APDALLEVGTSPFVGQWQGKSAS-FMRA 154 (412)
Q Consensus 128 l~~~L~l~Gss~~LG~W~~~kA~-~M~~ 154 (412)
.++.++++|+.+.||+|++++|+ +|..
T Consensus 600 ~g~~~~v~G~~~~LG~W~~~~a~~~l~~ 627 (686)
T 1d3c_A 600 LGQNVYLTGSVSELGNWDPAKAIGPMYN 627 (686)
T ss_dssp TTCEEEEEESSGGGTTTCGGGCBCCCBC
T ss_pred CCCEEEEEeCcHHhCCCChhhhhhhhcc
Confidence 47788999999999999999999 8987
No 21
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=90.02 E-value=0.95 Score=48.10 Aligned_cols=27 Identities=19% Similarity=0.261 Sum_probs=25.0
Q ss_pred ccccccccCCCCccCCCCCCcce-eeec
Q 015140 128 APDALLEVGTSPFVGQWQGKSAS-FMRA 154 (412)
Q Consensus 128 l~~~L~l~Gss~~LG~W~~~kA~-~M~~ 154 (412)
.++.++++|+.+.||+|++++|+ +|..
T Consensus 597 ~g~~v~v~G~~~~LG~W~~~~a~~~l~~ 624 (683)
T 3bmv_A 597 YGENVYLTGNVAELGNWDTSKAIGPMFN 624 (683)
T ss_dssp TTCEEEEEESSGGGTTTCGGGCBCSCBC
T ss_pred CCCEEEEEeCcHHhCCCChhhhhhhhcc
Confidence 47889999999999999999999 9987
No 22
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=88.68 E-value=1 Score=47.97 Aligned_cols=36 Identities=22% Similarity=0.386 Sum_probs=28.5
Q ss_pred ccccccccCCCCccCCCCC------Ccce-eeecCCCcccccccccccc
Q 015140 128 APDALLEVGTSPFVGQWQG------KSAS-FMRADDHWNREMERKWDTS 169 (412)
Q Consensus 128 l~~~L~l~Gss~~LG~W~~------~kA~-~M~~~n~~~~~~~~~wdt~ 169 (412)
.++.++++|+.+.||+|+. ++|+ +|...+ ...|-.+
T Consensus 596 ~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~~~------~~~W~~~ 638 (686)
T 1qho_A 596 LGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLAPN------YPDWFYV 638 (686)
T ss_dssp TTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBCTT------TTSEEEE
T ss_pred CCCEEEEEeChHHhCCCCCccccchhhhhcccccCC------CCcEEEE
Confidence 4677899999999999999 8888 888644 3457653
No 23
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=74.46 E-value=1.1 Score=47.71 Aligned_cols=39 Identities=15% Similarity=0.258 Sum_probs=30.8
Q ss_pred ccccccccCCCCccCCCCCCcceeeecCCCccccccccccc
Q 015140 128 APDALLEVGTSPFVGQWQGKSASFMRADDHWNREMERKWDT 168 (412)
Q Consensus 128 l~~~L~l~Gss~~LG~W~~~kA~~M~~~n~~~~~~~~~wdt 168 (412)
.++.++++|+.+.||+|+.++|++|+..+-. ..+..|-.
T Consensus 509 ~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~~t--~~~~~W~~ 547 (599)
T 2vn4_A 509 FGQTVKVAGNAAALGNWSTSAAVALDAVNYA--DNHPLWIG 547 (599)
T ss_dssp TTCEEEEEESSGGGTTTCTTTSEECBCTTCB--TTBCEEEE
T ss_pred CCCEEEEEecccCCCCcChhheeecccccCC--CCCCcEEE
Confidence 3888999999999999999999999987621 11345754
No 24
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=66.30 E-value=10 Score=42.71 Aligned_cols=50 Identities=14% Similarity=0.283 Sum_probs=41.4
Q ss_pred EEEEEeecCCCCEEEEEeCCCCcCCCCccccCeeeCCcEEEEEEec--------------CCceEEEEEEEE
Q 015140 14 SFRLDHQVEFGEHVVILGSTKELGSWKKNVPMKWSESGWLCDLEFK--------------GGESIEYKFVIV 71 (412)
Q Consensus 14 ~F~I~yqT~~GE~V~VvGS~~eLGnWdkAv~Ms~tdg~W~veV~lp--------------~gt~~EYKYvI~ 71 (412)
+|+|...|. |+.++|+++..+++ +++ .++.|+++|.+| +|+.++|||++.
T Consensus 709 ~~~i~~~~~-~~~~~v~~~~~~~~-----~~~--~~~~~~v~v~l~~~e~~v~~~~~~~~agt~~~~~~v~~ 772 (1020)
T 1ulv_A 709 TAVVRGTTN-AAKVYVSVNGTATE-----APV--TDGTFSLDVALTGAKNKVTVAAVAADGGTAVEDRTVLY 772 (1020)
T ss_dssp EEEEEEEEC-SSEEEEEETTEEEE-----ECC--BTTEEEEEEECCSSEEEEEEEEECTTSCEEEEEEEEEC
T ss_pred EEEEEEEcC-CceEEEEECCEEEe-----ccc--cCCeEEEEEEecCcceeEEeecccCCCCceEEEEEEEe
Confidence 377766666 99999999998875 666 445999999999 788999999985
No 25
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=65.65 E-value=1.3 Score=45.57 Aligned_cols=27 Identities=22% Similarity=0.428 Sum_probs=0.0
Q ss_pred ccccccccCCCCccCCCCCCcceeeec
Q 015140 128 APDALLEVGTSPFVGQWQGKSASFMRA 154 (412)
Q Consensus 128 l~~~L~l~Gss~~LG~W~~~kA~~M~~ 154 (412)
.++.+.++|+.+.||+|++++|+.|+.
T Consensus 444 ~G~~v~v~G~~~~LG~W~~~~a~~l~~ 470 (527)
T 1gcy_A 444 MGDSVYAVGNVSQLGNWSPAAALRLTD 470 (527)
T ss_dssp ---------------------------
T ss_pred CCCeEEEEcChhHhCCCCcccCccCcc
Confidence 378899999999999999999999974
No 26
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=62.45 E-value=2.5 Score=44.16 Aligned_cols=30 Identities=20% Similarity=0.327 Sum_probs=25.9
Q ss_pred CccccccccCCCCccCCCCCCcc-eeeecCC
Q 015140 127 AAPDALLEVGTSPFVGQWQGKSA-SFMRADD 156 (412)
Q Consensus 127 ql~~~L~l~Gss~~LG~W~~~kA-~~M~~~n 156 (412)
+.++.+.++|+.+.||+|+.++| ++|+..+
T Consensus 432 ~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~~ 462 (516)
T 1vem_A 432 TIGDTVYITGNRAELGSWDTKQYPIQLYYDS 462 (516)
T ss_dssp CTTCEEEEEESSGGGTTTCSSSSCEECEEET
T ss_pred CCCCEEEEEeChhhhCCCChhhhceecccCC
Confidence 34888999999999999999999 7897733
No 27
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=59.54 E-value=23 Score=38.57 Aligned_cols=56 Identities=13% Similarity=0.287 Sum_probs=39.8
Q ss_pred EEEEEEeecCCCCEEEEEeCCCCcCCCC-ccccCeeeC-CcEEEEEE-------ecCCceEEEEEEEEeCCC
Q 015140 13 ISFRLDHQVEFGEHVVILGSTKELGSWK-KNVPMKWSE-SGWLCDLE-------FKGGESIEYKFVIVRNDK 75 (412)
Q Consensus 13 V~F~I~yqT~~GE~V~VvGS~~eLGnWd-kAv~Ms~td-g~W~veV~-------lp~gt~~EYKYvI~d~~g 75 (412)
++|.+ ...--+.|.|+|+ +.+|+ ..++|...+ |.|++.|. ++.| ..|||.|...++
T Consensus 67 v~F~v--wAP~A~~V~l~gd---fn~w~~~~~~m~~~~~GvW~~~v~~~~g~~~i~~g--~~Y~y~i~~~~g 131 (755)
T 3aml_A 67 TIYRE--WAPAAQEAQLIGE---FNNWNGAKHKMEKDKFGIWSIKISHVNGKPAIPHN--SKVKFRFRHGGG 131 (755)
T ss_dssp EEEEE--ECTTCSEEEEEEG---GGTTCCTTCBCEECTTSEEEEEEECBTTBCSSCTT--EEEEEEEECTTC
T ss_pred EEEEE--ECCCCCEEEEEEe---cCCCCCceeeceeCCCCEEEEEEcccccccCCCCC--CEEEEEEECCCC
Confidence 56666 2234579999996 56788 788998765 59998887 3444 469999976433
No 28
>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus}
Probab=58.59 E-value=7.9 Score=38.41 Aligned_cols=52 Identities=13% Similarity=0.277 Sum_probs=23.9
Q ss_pred CcHHHHHHHHHHHHHHHhhhccCC-------h-----HHHHHHHhhhccHHHHHHHHHHHHhhh
Q 015140 343 YSESFVEQFKMFHSELKDFFNAGS-------L-----AEQLDSIRESLDEQAASALSSFLECKK 394 (412)
Q Consensus 343 y~~~fv~ef~~f~~elk~ffna~~-------~-----~~~l~~~~~~~~~~~~~~~~~f~~~k~ 394 (412)
-+..|..=++.-.+.||+||.|+| | ...|+.+-.....++.++|..|.+++.
T Consensus 277 ~~~~~~~~l~~~L~~L~~fFhA~G~GL~~~~Leks~~~~~l~~~L~L~~~~T~~LI~~f~~~~~ 340 (341)
T 3swh_A 277 LTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDLLIKTFVQTQS 340 (341)
T ss_dssp --CTTHHHHHHHHHHHHHHHHGGGTSCCHHHHHTCHHHHHHHHHHHHC----------------
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCCCHHHHccChhHHHHHHHHHHhcCCHHHHHHHHHhccC
Confidence 345677788888899999999998 2 222333334667788888888887753
No 29
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=58.28 E-value=35 Score=35.72 Aligned_cols=58 Identities=17% Similarity=0.400 Sum_probs=39.9
Q ss_pred EEEEEEEeecCCCCEEEEEeCCCCcCCCC-ccccCee--eCCcEEEEEEe-cCCceEEEEEEEEeCCCc
Q 015140 12 RISFRLDHQVEFGEHVVILGSTKELGSWK-KNVPMKW--SESGWLCDLEF-KGGESIEYKFVIVRNDKS 76 (412)
Q Consensus 12 ~V~F~I~yqT~~GE~V~VvGS~~eLGnWd-kAv~Ms~--tdg~W~veV~l-p~gt~~EYKYvI~d~~g~ 76 (412)
.++|+|-. .--+.|.|+|+ ..+|+ ..++|.. .+|.|++.|.. +.|. .|+|.|...++.
T Consensus 26 gv~F~vwA--P~A~~V~L~gd---fn~~~~~~~~M~~~~~~GvW~~~v~~~~~g~--~Y~f~i~~~~g~ 87 (617)
T 1m7x_A 26 GTRFSVWA--PNARRVSVVGQ---FNYWDGRRHPMRLRKESGIWELFIPGAHNGQ--LYKYEMIDANGN 87 (617)
T ss_dssp EEEEEEEC--SSCSCEEEEEG---GGTSCTTTCBCCCCTTTTEEEEEEETCCTTC--EEEEEEECTTSC
T ss_pred cEEEEEEC--CCCCEEEEEEE---eCCCCCceeEeEECCCCCEEEEEEcCCCCCC--EEEEEEEcCCCc
Confidence 46777732 23479999986 45687 7889986 33599998873 4444 699999764443
No 30
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=55.29 E-value=40 Score=34.92 Aligned_cols=65 Identities=9% Similarity=0.123 Sum_probs=42.3
Q ss_pred CeEEEEEEEEeecCCCCEEEE-EeCCCCcCCCC----ccccCeee--CC---cEEEEEEecCCceEEEEEEEEeCCCceE
Q 015140 9 GNVRISFRLDHQVEFGEHVVI-LGSTKELGSWK----KNVPMKWS--ES---GWLCDLEFKGGESIEYKFVIVRNDKSKA 78 (412)
Q Consensus 9 ~~v~V~F~I~yqT~~GE~V~V-vGS~~eLGnWd----kAv~Ms~t--dg---~W~veV~lp~gt~~EYKYvI~d~~g~ve 78 (412)
..+.|+|++...+ -++|.| +|+. .+|+ ..++|... +| .|+++|..+. ....|||.|...++...
T Consensus 21 ~~~~i~~~~~~~~--a~~V~l~~~d~---~~~~~~~~~~~~m~~~~~~~~~~~w~~~i~~~~-~~~~Y~f~i~~~~g~~~ 94 (585)
T 1wzl_A 21 TQLRVRLRAKKGD--VVRCEVLYADR---YASPEEELAHALAGKAGSDERFDYFEALLECST-KRVKYVFLLTGPQGEAV 94 (585)
T ss_dssp TEEEEEEEEETTT--CSEEEEEEECT---TCCTTSCCEEEECEEEEECSSEEEEEEEEECTT-SCEEEEEEEECTTSCEE
T ss_pred CEEEEEEEECCCC--ccEEEEEECCC---cCCCCCceEEEEEEEeecCCCEEEEEEEEECCC-CeEEEEEEEEeCCCcEE
Confidence 4577777663322 378888 7863 5565 46788753 23 6998887643 34799999986545444
Q ss_pred E
Q 015140 79 W 79 (412)
Q Consensus 79 W 79 (412)
|
T Consensus 95 ~ 95 (585)
T 1wzl_A 95 Y 95 (585)
T ss_dssp E
T ss_pred E
Confidence 4
No 31
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=54.78 E-value=17 Score=33.07 Aligned_cols=50 Identities=22% Similarity=0.329 Sum_probs=35.1
Q ss_pred eecCCCCEEEEEeCCCCcCCCCccccCeeeC---CcEEEEEEecCCceEEEEEEEE
Q 015140 19 HQVEFGEHVVILGSTKELGSWKKNVPMKWSE---SGWLCDLEFKGGESIEYKFVIV 71 (412)
Q Consensus 19 yqT~~GE~V~VvGS~~eLGnWdkAv~Ms~td---g~W~veV~lp~gt~~EYKYvI~ 71 (412)
+.+.+-++|||+|+... -+|+++++|.... +.+...+.++++. +|||.-.
T Consensus 7 ~~~~~p~~lY~vG~~~g-W~~~~~~~m~~~~~~~g~y~~~~yl~ag~--~fKf~~~ 59 (221)
T 4fch_A 7 SSLTPPKTMFIVGSMLD-TDWKVWKPMAGVYGMDGQFYSMIYFDANS--EFKFGTK 59 (221)
T ss_dssp --CCCCSCCEEEETTTC-TTSCCEEECEECTTCTTEEEEEEEECTTE--EEEEESS
T ss_pred CCCCCcceEEEEecCCC-CCCCccceeeeccCCCceEEEEEEEcCCC--eEEEeec
Confidence 45566789999999753 1334888998764 4777788888865 7888654
No 32
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=52.17 E-value=21 Score=37.01 Aligned_cols=64 Identities=17% Similarity=0.454 Sum_probs=41.1
Q ss_pred CCeEEEEEEEEeecCCCCEEEE-EeCCCC--cCCCC-ccccCeeeC--C---cEEEEEEecCCceEEEEEEEEeCC
Q 015140 8 GGNVRISFRLDHQVEFGEHVVI-LGSTKE--LGSWK-KNVPMKWSE--S---GWLCDLEFKGGESIEYKFVIVRND 74 (412)
Q Consensus 8 ~~~v~V~F~I~yqT~~GE~V~V-vGS~~e--LGnWd-kAv~Ms~td--g---~W~veV~lp~gt~~EYKYvI~d~~ 74 (412)
+..+.|+|++...+ =++|.| +|+... -|.|+ ..++|...+ | .|+++|..+. ....|||.|...+
T Consensus 20 ~~~~~i~~~~~~~~--a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~~~~~~~w~~~v~~~~-~~~~Y~f~i~~~~ 92 (588)
T 1j0h_A 20 SETLHLRLRTKKDD--IDRVELLHGDPYDWQNGAWQFQMMPMRKTGSDELFDYWFAEVKPPY-RRLRYGFVLYSGE 92 (588)
T ss_dssp SSCEEEEEEEETTT--CSEEEEEEECTTCEETTEECCEEEECEEEEECSSEEEEEEEECCTT-SCEEEEEEEEETT
T ss_pred CCEEEEEEEECCCC--ccEEEEEECCCCCccccccceEEEEeEEeecCCCeEEEEEEEECCC-cEEEEEEEEEeCC
Confidence 45688888874332 278888 686432 12344 578998542 3 6988887533 3579999998554
No 33
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=50.43 E-value=24 Score=38.22 Aligned_cols=58 Identities=22% Similarity=0.408 Sum_probs=41.5
Q ss_pred EEEEEEEeecCCCCEEEEEeCCCCcCCCC-ccccCeee-C-CcEEEEEE-ecCCceEEEEEEEEeCCCc
Q 015140 12 RISFRLDHQVEFGEHVVILGSTKELGSWK-KNVPMKWS-E-SGWLCDLE-FKGGESIEYKFVIVRNDKS 76 (412)
Q Consensus 12 ~V~F~I~yqT~~GE~V~VvGS~~eLGnWd-kAv~Ms~t-d-g~W~veV~-lp~gt~~EYKYvI~d~~g~ 76 (412)
-++|.| ...--+.|.|+|+ +.+|+ ...+|... + |.|++.|. +..|. .|||.|...++.
T Consensus 137 g~~F~v--wAP~A~~V~l~gd---fn~w~~~~~~m~~~~~~GvW~~~i~~~~~g~--~Y~y~i~~~~g~ 198 (722)
T 3k1d_A 137 GVSFAV--WAPNAKGVSLIGE---FNGWNGHEAPMRVLGPSGVWELFWPDFPCDG--LYKFRVHGADGV 198 (722)
T ss_dssp EEEEEE--ECTTCSEEEEEEG---GGTTCCCSCBCEECGGGCEEEEEEETCCTTC--EEEEEEECTTSC
T ss_pred eEEEEE--ECCCCCEEEEEee---cCCCCCCcccCEEcCCCCEEEEEeCCCCCCC--EEEEEEEcCCCc
Confidence 467776 2233479999996 56798 78899864 3 69998886 45554 799999865554
No 34
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=44.97 E-value=80 Score=30.84 Aligned_cols=64 Identities=11% Similarity=0.100 Sum_probs=39.4
Q ss_pred CeEEEEEEEEeec-----CCCCEEEEEeC--CCCcCCCCccccCeeeC--CcEEEEEEecCCceEEEEEEEEeC
Q 015140 9 GNVRISFRLDHQV-----EFGEHVVILGS--TKELGSWKKNVPMKWSE--SGWLCDLEFKGGESIEYKFVIVRN 73 (412)
Q Consensus 9 ~~v~V~F~I~yqT-----~~GE~V~VvGS--~~eLGnWdkAv~Ms~td--g~W~veV~lp~gt~~EYKYvI~d~ 73 (412)
....|+|...-.. ..=+.|+|.++ .+...+| ....|+-.+ |.|+.++.+|.+-...|.|++...
T Consensus 29 ~~~~vtF~~~~p~a~~~~~~~~~V~~~~~~~~d~~~~~-~~~~m~r~~~~~~W~~t~~l~~~~~~~Y~~~~~~~ 101 (403)
T 3c8d_A 29 EMFEVTFWWRDPQGSEEYSTIKRVWVYITGVTDHHQNS-QPQSMQRIAGTDVWQWTTQLNANWRGSYCFIPTER 101 (403)
T ss_dssp SEEEEEEEEECTTCSTTTCCCCEEEEEETTTC--------CCBCEECTTSSEEEEEEEEETTCEEEEEEEEESC
T ss_pred CcEEEEEEeeCCCcccccCccceEEEECcCCCcccccc-CccccccCCCCCeEEEEEEECCCcEEEEEEEecCc
Confidence 3567888773211 11168999843 2211122 455788743 599999999998877999988744
No 35
>4gio_A Putative lipoprotein; unknown function; 1.90A {Campylobacter jejuni subsp}
Probab=44.57 E-value=66 Score=26.68 Aligned_cols=76 Identities=18% Similarity=0.169 Sum_probs=45.5
Q ss_pred CCCCEEEEEeCCCCcCCCC--ccccCeeeCCcEEEEEEecC--CceEEEEEEEEeCCCceEEecC--CCceEEcCCCCeE
Q 015140 22 EFGEHVVILGSTKELGSWK--KNVPMKWSESGWLCDLEFKG--GESIEYKFVIVRNDKSKAWEAG--DNRILKLPKGGSF 95 (412)
Q Consensus 22 ~~GE~V~VvGS~~eLGnWd--kAv~Ms~tdg~W~veV~lp~--gt~~EYKYvI~d~~g~veWE~G--~NR~L~lp~~~s~ 95 (412)
.--+.++|.|+. |+.=- ........+|..++++.+.. ...|.|||.-+|.+|-.....+ +=+.+.++.+...
T Consensus 8 n~~q~~vi~~s~--l~~~l~~~~~~~~~~nG~l~v~v~~~s~~~~~l~Yrf~WyD~~G~~v~~~~~~~W~~~~l~g~~~~ 85 (107)
T 4gio_A 8 NSNQNTVILGSN--LPKSLVKQFQKRINSNGYLEFEVILRSTFAKDVIYKVDWLDKDGFVLRDVLNEDYQALRIPAGQEV 85 (107)
T ss_dssp ---CCSEEECTT--SCTTSEEEEEEEECTTSCEEEEEEECCSSCEEEEEEEEEECTTSCBCCSSCCCCCEEEEECTTCCE
T ss_pred CCceeEEEecCc--cccceeeccceEEccCCEEEEEEEecCCCceEEEEEEEEECCCCCCcCCCCCCCCEEEEEcCCCeE
Confidence 344566776664 33221 22223334568889988843 3479999999999875544332 2378888877766
Q ss_pred EEEE
Q 015140 96 EIVC 99 (412)
Q Consensus 96 ~V~D 99 (412)
+|.-
T Consensus 86 ~i~~ 89 (107)
T 4gio_A 86 ILRK 89 (107)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 36
>2nrt_A Uvrabc system protein C; UVRC, endonuclease, RNAse H, helix hairpin helix, NER, hydrolase; 1.50A {Thermotoga maritima} PDB: 2nrv_A 2nrw_A 2nrx_A 2nrz_A
Probab=38.25 E-value=14 Score=34.71 Aligned_cols=75 Identities=21% Similarity=0.388 Sum_probs=42.9
Q ss_pred cchhccccccCCCChhHHHHHHHHHhhhhc--ccCCcchhHHHHHHHhhhhcCCCCCcHHHHHHHHHHHHHHHhhhccCC
Q 015140 289 LTRIRDIAHRNDIPHDLKLEIKHTIQNKLH--RNAGPEDLVATEAMLAKITKNPGEYSESFVEQFKMFHSELKDFFNAGS 366 (412)
Q Consensus 289 ltrirdiahr~dip~dlk~eikhtiqnklh--r~agpedl~ate~~l~r~~~~~g~y~~~fv~ef~~f~~elk~ffna~~ 366 (412)
|+||||=|||--|---=++--|..++.-|- +.-|| .+...+|+.+. .++.+.+|+
T Consensus 142 lq~iRDEaHRFAIt~hr~~R~k~~~~s~LdgIpGIG~---k~ak~Ll~~Fg-------------------Sl~~i~~As- 198 (220)
T 2nrt_A 142 LVQIRDETHRFAVSYHRKRREKESLRSVLDNVPGIGP---IRKKKLIEHFG-------------------SLENIRSAS- 198 (220)
T ss_dssp HHHHHHHHHHHHHGGGHHHHHHHHHHHHHTTSTTCCH---HHHHHHHHHHC-------------------SHHHHHTSC-
T ss_pred hhhhcchhhhccccccccccccccccccccCCCCcCH---HHHHHHHHHcC-------------------CHHHHHhCC-
Confidence 789999999998874444445555565553 34443 23333443321 345556665
Q ss_pred hHHHHHHHhhhccH-HHHHHHHHHH
Q 015140 367 LAEQLDSIRESLDE-QAASALSSFL 390 (412)
Q Consensus 367 ~~~~l~~~~~~~~~-~~~~~~~~f~ 390 (412)
.|.|.++ +.+ ..++.|-+|+
T Consensus 199 -~EeL~~V---IG~~~~A~~I~~~f 219 (220)
T 2nrt_A 199 -LEEIARV---IGSTEIARRVLDIL 219 (220)
T ss_dssp -HHHHHHH---HTCHHHHHHHHHHC
T ss_pred -HHHHHHH---hChHHHHHHHHHHh
Confidence 3445555 555 6666665553
No 37
>1ryl_A Hypothetical protein YFBM; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Escherichia coli} SCOP: d.276.1.1
Probab=33.38 E-value=33 Score=30.43 Aligned_cols=20 Identities=5% Similarity=0.079 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHhhhcc
Q 015140 345 ESFVEQFKMFHSELKDFFNA 364 (412)
Q Consensus 345 ~~fv~ef~~f~~elk~ffna 364 (412)
+.+.++....+++||+||+.
T Consensus 134 ~~~~e~l~~~f~~L~~Fy~~ 153 (167)
T 1ryl_A 134 GQLFASIMLDMEKLISAYRR 153 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999985
No 38
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=33.03 E-value=88 Score=26.05 Aligned_cols=73 Identities=14% Similarity=0.052 Sum_probs=44.3
Q ss_pred CEEEEEeCCCCcCCCC--ccccCeeeCCcEEEEEEec----CCceEEEEEEEEeCCCc-eEEecCCCceEEcCCCCeEEE
Q 015140 25 EHVVILGSTKELGSWK--KNVPMKWSESGWLCDLEFK----GGESIEYKFVIVRNDKS-KAWEAGDNRILKLPKGGSFEI 97 (412)
Q Consensus 25 E~V~VvGS~~eLGnWd--kAv~Ms~tdg~W~veV~lp----~gt~~EYKYvI~d~~g~-veWE~G~NR~L~lp~~~s~~V 97 (412)
++|++-++. |+..- ..+.....+|..++.+.+. ....+.|||.-+|.+|- +.-+..+=+.+.++.....+|
T Consensus 13 q~vv~~~s~--La~~i~v~~~~~~~~~g~l~~~~~l~N~~~~~~~l~Yrf~WyD~~Gl~v~~~~~~W~~l~l~~~~~~~l 90 (112)
T 3o0l_A 13 GEVRVDNGS--FHSDVDVSAVTTQAEAGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGVSWKSLKLHGKQQMQV 90 (112)
T ss_dssp SEEEEEETT--EEEEEEEEEEEEECGGGCEEEEEEEEECSSSCEEEEEEEEEECTTSCBCCCTTCCCEEEEECTTCEEEE
T ss_pred ceEEEcCch--hcCCEEEeCCEEEecCCeEEEEEEEEeCCCCCEEEEEEEEEECCCCCCcCCCCCCcEEEEECCCCeEEE
Confidence 466665552 33332 2333334456888888872 22369999999999774 343222228888888776666
Q ss_pred EE
Q 015140 98 VC 99 (412)
Q Consensus 98 ~D 99 (412)
.-
T Consensus 91 ~~ 92 (112)
T 3o0l_A 91 TA 92 (112)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 39
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=29.20 E-value=82 Score=28.99 Aligned_cols=47 Identities=15% Similarity=0.262 Sum_probs=32.4
Q ss_pred CcHHHHHHHHHHHHHHHhhhccCChHHHHHHHhhhccHHHHHHHHHHHHh
Q 015140 343 YSESFVEQFKMFHSELKDFFNAGSLAEQLDSIRESLDEQAASALSSFLEC 392 (412)
Q Consensus 343 y~~~fv~ef~~f~~elk~ffna~~~~~~l~~~~~~~~~~~~~~~~~f~~~ 392 (412)
++++-.++++..|++|- -. ..+.|+|+.|++.++....+.+-+|++.
T Consensus 206 ~~~~~~~~l~~~~~~l~--~~-~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 252 (266)
T 3r0s_A 206 FDKDEVDRLSRAFKTLF--RQ-GDLKENAKNLLENQESENVKKMCHFILE 252 (266)
T ss_dssp SCHHHHHHHHHHHHHHH--SS-SCHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH--cc-CcHHHHHHHHHhhcCCHHHHHHHHHHHh
Confidence 55666777777777663 23 8899999999976643445666777753
No 40
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=27.66 E-value=29 Score=30.02 Aligned_cols=46 Identities=22% Similarity=0.390 Sum_probs=30.2
Q ss_pred cCCCChhHHHHHHHHHhh-----hhcccCCcchhHHHHHHHhhhhcCCCCC
Q 015140 298 RNDIPHDLKLEIKHTIQN-----KLHRNAGPEDLVATEAMLAKITKNPGEY 343 (412)
Q Consensus 298 r~dip~dlk~eikhtiqn-----klhr~agpedl~ate~~l~r~~~~~g~y 343 (412)
-+++|.+||+||...+.. .+.++..++.|-+.-..++..+-.||++
T Consensus 58 l~~Lp~~L~~~i~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~ 108 (212)
T 3ukn_A 58 LKDFPDELRADIAMHLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEF 108 (212)
T ss_dssp TTTSCHHHHHHHHTTCCCGGGGSGGGTTCCHHHHHHHHHHCEEEEECTTCE
T ss_pred HHHcCHHHHHHHHHHHHHHHHhcHHhhcCCHHHHHHHHHHhheEEeCCCCE
Confidence 368899999999866544 4455666666655555555444567764
No 41
>2lnh_A N-WAsp, neural wiskott-aldrich syndrome protein; protein complex, signaling protein-protein binding complex; NMR {Homo sapiens}
Probab=27.27 E-value=9.7 Score=29.37 Aligned_cols=37 Identities=22% Similarity=0.460 Sum_probs=30.0
Q ss_pred HHHHhhhccCChHHHHHHHhhhccHHHHHHHHHHHHhhhccC
Q 015140 356 SELKDFFNAGSLAEQLDSIRESLDEQAASALSSFLECKKVSH 397 (412)
Q Consensus 356 ~elk~ffna~~~~~~l~~~~~~~~~~~~~~~~~f~~~k~~~~ 397 (412)
.|++++|..+++.+ +.++ |+++...|-+|++...-++
T Consensus 25 ~eW~~ll~~sGIs~--~~~k---~~et~~~I~~F~~~~gG~e 61 (65)
T 2lnh_A 25 PELKNLFDMCGISE--AQLK---DRETSKVIYDFIEKTGGVE 61 (65)
T ss_dssp TTHHHHHHHHTCCH--HHHT---CTTTHHHHHHHHHHHCCHH
T ss_pred HHHHHHHHHcCCCH--HHHH---CHHHHHHHHHHHHHcCCcc
Confidence 47899999999997 5666 8888999999998765443
No 42
>3l9o_A ATP-dependent RNA helicase DOB1; REC-A fold, winged-helix-turn-helix, antiparallel-coiled-COI domain, ATP-binding, helicase, hydrolase; 3.39A {Saccharomyces cerevisiae}
Probab=26.85 E-value=1.4e+02 Score=33.66 Aligned_cols=102 Identities=22% Similarity=0.362 Sum_probs=67.4
Q ss_pred ccccchhccccc-cCCCChh-----HHHHHHHHHhhhhcccC-Ccc-----------h------hHHHHHHHhhhhcCCC
Q 015140 286 SVPLTRIRDIAH-RNDIPHD-----LKLEIKHTIQNKLHRNA-GPE-----------D------LVATEAMLAKITKNPG 341 (412)
Q Consensus 286 ~~pltrirdiah-r~dip~d-----lk~eikhtiqnklhr~a-gpe-----------d------l~ate~~l~r~~~~~g 341 (412)
.+||+-|-.|.+ |-.||.| -++.+..+|++...|.- |+. | +--.+++-+++.++|-
T Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 875 (1108)
T 3l9o_A 796 PITLDSIKSIGNLRLYMPKDIRASGQKETVGKSLREVNRRFPDGIPVLDPVKNMKIEDEDFLKLMKKIDVLNTKLSSNPL 875 (1108)
T ss_dssp CEESSCEEEEEEEECCCCTTTTSHHHHHHHHHHHHHHHHHCSSCCTTHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHSSC
T ss_pred EechhheeeccceEEecCCCcCCHHHHHHHHHHHHHHHHhcCCCCcccChhhhcccCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 667777777765 5566654 46778888887665532 221 1 1345677778888998
Q ss_pred CCcHHHHHHHHHHHHHHHhhhccCChHHHHHHHhhhccH-HHHHHHHHHHHhhh
Q 015140 342 EYSESFVEQFKMFHSELKDFFNAGSLAEQLDSIRESLDE-QAASALSSFLECKK 394 (412)
Q Consensus 342 ~y~~~fv~ef~~f~~elk~ffna~~~~~~l~~~~~~~~~-~~~~~~~~f~~~k~ 394 (412)
--...|-+.|+.+++..+ |.+.++.++..+.+ ....+...|..-+.
T Consensus 876 ~~~~~~~~~~~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (1108)
T 3l9o_A 876 TNSMRLEELYGKYSRKHD-------LHEDMKQLKRKISESQAVIQLDDLRRRKR 922 (1108)
T ss_dssp TTCSSHHHHHHHHHHHHH-------HHHHHHHHHHHHHC-CHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 888899988888877643 67778888877766 44445555554443
No 43
>4a4z_A Antiviral helicase SKI2; hydrolase, ATPase, mRNA degradation, exosome; HET: ANP; 2.40A {Saccharomyces cerevisiae} PDB: 4a4k_A
Probab=25.66 E-value=65 Score=36.00 Aligned_cols=109 Identities=16% Similarity=0.177 Sum_probs=57.9
Q ss_pred ccccc-ccccchhccccc-cCCCC-hhH-------HHHHHHHHhhhhccc-CCc--------ch----hHHHHHHHhhhh
Q 015140 281 AEFTA-SVPLTRIRDIAH-RNDIP-HDL-------KLEIKHTIQNKLHRN-AGP--------ED----LVATEAMLAKIT 337 (412)
Q Consensus 281 ~eft~-~~pltrirdiah-r~dip-~dl-------k~eikhtiqnklhr~-agp--------ed----l~ate~~l~r~~ 337 (412)
.+|.- .|||+.|.-|.+ |-.+| .|+ ++.+..++++.+.+. -.| .+ +-..+++.+++.
T Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (997)
T 4a4z_A 678 TDFYMEEVPVTAIEVITKRKFAAPLGKVIKKDVAALNEFNAETNNILDGKTLKEAINIEKQGLKIHQILLDRTNIRDEIF 757 (997)
T ss_dssp CCCCEEEEECC-CCEEEEEECC-CHHHHHHTCHHHHHHHHHHHHHHHHSCCCCCC------CCHHHHHHHHHHHHHHC--
T ss_pred CceEEEEeccchhhhhhcccccCChHhhhcCCHHHHHHHHHHHHHHhccCCCCchhhcccccHHHHHHHHHHHHHHHHHH
Confidence 34443 799999998887 46665 333 233444444444431 112 11 224577788888
Q ss_pred cCCCCCcHHHHHHHHHHHHHHHhhhccCChHHHHHHHhhhccHHHHHHHHHHHHhhhcc
Q 015140 338 KNPGEYSESFVEQFKMFHSELKDFFNAGSLAEQLDSIRESLDEQAASALSSFLECKKVS 396 (412)
Q Consensus 338 ~~~g~y~~~fv~ef~~f~~elk~ffna~~~~~~l~~~~~~~~~~~~~~~~~f~~~k~~~ 396 (412)
++|=--...|-+.|+.+++..+ |.+.++.++..+.+++..++.+|-.-+.-|
T Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~vL 809 (997)
T 4a4z_A 758 KLKSIKCPNLSQHIVPKFKAHV-------IKKKIEELYHLMSDQNLSLLPDYEKRLAVL 809 (997)
T ss_dssp ----------CCSHHHHHHHHH-------HHHHHHHHHHTTTC---CHHHHHHHHHHHH
T ss_pred hCCCCCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 8888778888888888876654 778889999888888888888876555433
No 44
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=25.24 E-value=79 Score=28.73 Aligned_cols=49 Identities=14% Similarity=0.213 Sum_probs=31.3
Q ss_pred CCcHHHHHHHHHHHHHHHhhhccCChHHHHHHHhhhccH-HHHHHHHHHHHh
Q 015140 342 EYSESFVEQFKMFHSELKDFFNAGSLAEQLDSIRESLDE-QAASALSSFLEC 392 (412)
Q Consensus 342 ~y~~~fv~ef~~f~~elk~ffna~~~~~~l~~~~~~~~~-~~~~~~~~f~~~ 392 (412)
.||++..++++.-|.+| |-.-..|.++|+.|++.+.+ ...+.+-+|++.
T Consensus 206 ~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (262)
T 2qia_A 206 GFSREAITAIRNAYKLI--YRSGKTLDEVKPEIAELAETYPEVKAFTDFFAR 255 (262)
T ss_dssp TCCHHHHHHHHHHHHHH--HTSCCCHHHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH--HhcCCCHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 36777777777666665 22355688999988876522 224555566665
No 45
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=25.17 E-value=25 Score=30.00 Aligned_cols=44 Identities=9% Similarity=0.184 Sum_probs=27.6
Q ss_pred CCChhHHHHHHHHHh------hhhcccCCcchhHHHHHHHhhhhcCCCCC
Q 015140 300 DIPHDLKLEIKHTIQ------NKLHRNAGPEDLVATEAMLAKITKNPGEY 343 (412)
Q Consensus 300 dip~dlk~eikhtiq------nklhr~agpedl~ate~~l~r~~~~~g~y 343 (412)
++|.+||+||+.-+. ..+.++..++.|-..-..++..+-.||++
T Consensus 55 ~l~~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~ 104 (198)
T 2ptm_A 55 EVSESIRQDVANYNCRDLVASVPFFVGADSNFVTRVVTLLEFEVFQPADY 104 (198)
T ss_dssp HSCHHHHHHHHHHHTHHHHHHCGGGTTCCHHHHHHHHHHCEEEEECTTCE
T ss_pred HcCHHHHHHHHHHHHHHHHhcCcchhcCCHHHHHHHHHhccceeeCCCCE
Confidence 468899999875443 34556666666655555555555566654
No 46
>3odn_A Dally-like protein; alpha helical bundle, hedgehog signaling, hedgehog VIA CO- immunoprecipitation, membrane protein; 2.40A {Drosophila melanogaster}
Probab=24.37 E-value=45 Score=35.04 Aligned_cols=150 Identities=19% Similarity=0.282 Sum_probs=90.7
Q ss_pred chhhHHHHHHHHHHhhhccCCCChhH----------HHHHHhhcCCCCCcccccccccccchhccccccCCCChhHHHHH
Q 015140 240 RHAEISRLIFRELEQISCRKDASPQE----------VLVIRKIHPCLPSFKAEFTASVPLTRIRDIAHRNDIPHDLKLEI 309 (412)
Q Consensus 240 ~ha~~~r~~f~~le~~~~~~~~~~~~----------~~~~r~~~p~lpsf~~eft~~~pltrirdiahr~dip~dlk~ei 309 (412)
.++.+-+++|.+|+.-+...+++.+| -.|.+.|+|.. +|.++|..=+--+ ++||-==.|||..|+..|
T Consensus 113 qn~~~f~~LF~~L~~Yy~g~~v~Lee~v~~Ff~~Lf~~~f~llnp~~-~~s~dY~eCl~~~-~~~l~PFGdvP~kL~~ql 190 (506)
T 3odn_A 113 RNSYVFSDLFKELETYFANGRVDLLEVMDKFFNTLYQKMFTVLNTQY-TFDENYMRCVSEH-MKELKPFGDVPDKLSVQI 190 (506)
T ss_dssp HTHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHTTTS-CCCHHHHHHHHHH-HHHHCTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHcCCCC-CCChHHHHHHHHH-HHhhCCcccchHHHHHHH
Confidence 57789999999999988666777766 33556788888 5887776533322 477777889999999999
Q ss_pred HHHHh----------------hh-hcccCCcchhHHHHHHH-----hhhhcCC-------------CCCcHHHHHHHHHH
Q 015140 310 KHTIQ----------------NK-LHRNAGPEDLVATEAML-----AKITKNP-------------GEYSESFVEQFKMF 354 (412)
Q Consensus 310 khtiq----------------nk-lhr~agpedl~ate~~l-----~r~~~~~-------------g~y~~~fv~ef~~f 354 (412)
+.++. || +|=..+||=.-|.=.|. +.++.+| +.| .++=-+.+.|
T Consensus 191 ~Rs~~AaR~f~QaL~~g~eVv~~~~~v~ls~eC~rALmkM~YCp~C~Gl~~kPC~gyClNVMrGCLa~~-adLd~~W~~~ 269 (506)
T 3odn_A 191 KRSFVATRTYGQALTTASEVAKKVLNVRLNADCTGALTKMQHCGACKGYTEKPCTNYCVNVIKGCLHYQ-HEFDSEWENF 269 (506)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC----THHHHHHHHHHTSSGGGTCCCCBBHHHHHHHHHHHTGGG-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHhcCCCccccCCCCCCchHHHHHHHHHhccch-hhhhhHHHHH
Confidence 98542 22 33455555332222222 2233333 112 2233455555
Q ss_pred HHHHHhhhccCChHHHH------HHHhhhccHHHHHHHHHHHHhhhccCc
Q 015140 355 HSELKDFFNAGSLAEQL------DSIRESLDEQAASALSSFLECKKVSHC 398 (412)
Q Consensus 355 ~~elk~ffna~~~~~~l------~~~~~~~~~~~~~~~~~f~~~k~~~~~ 398 (412)
.+=|.. |+++| +.+-..++-...+||-.|.+.+..+-+
T Consensus 270 IdsL~~------La~~l~g~~nie~vl~~i~~kISEAIm~~Qen~~~is~ 313 (506)
T 3odn_A 270 AMAMDK------VAERLLGSFNIVMVVEPLNIKISEAIMNFQDSGQDITN 313 (506)
T ss_dssp HHHHHH------HHHHHHTTTCSHHHHTTHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHH------HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 555432 44444 333447777778888888887766643
No 47
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=23.85 E-value=23 Score=30.45 Aligned_cols=45 Identities=24% Similarity=0.276 Sum_probs=28.8
Q ss_pred CCCChhHHHHHHHHHhh------hhcccCCcchhHHHHHHHhhhhcCCCCC
Q 015140 299 NDIPHDLKLEIKHTIQN------KLHRNAGPEDLVATEAMLAKITKNPGEY 343 (412)
Q Consensus 299 ~dip~dlk~eikhtiqn------klhr~agpedl~ate~~l~r~~~~~g~y 343 (412)
+++|.+|++||+.-+.. .+.++..++.+-..-..++..+-.||++
T Consensus 55 ~~l~~~L~~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~ 105 (202)
T 3bpz_A 55 GELNGPLREKIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDY 105 (202)
T ss_dssp HHSCHHHHHHHHHHHTHHHHHTCHHHHTSCHHHHHHHHHHCEEEEECTTCE
T ss_pred HHcCHHHHHHHHHHHHHHHHhcCCchhcCCHHHHHHHHHhCCceEECCCCE
Confidence 35688999998754433 3555667776666655555555567664
No 48
>3kkc_A TETR family transcriptional regulator; APC20805, structural genomics, PSI-2, protein structure initiative; 2.50A {Streptococcus agalactiae 2603V}
Probab=23.82 E-value=1.1e+02 Score=24.54 Aligned_cols=37 Identities=11% Similarity=0.150 Sum_probs=23.3
Q ss_pred ccchhccccccCCCC-----------hhHHHHHHHHHhhhhcccCCcc
Q 015140 288 PLTRIRDIAHRNDIP-----------HDLKLEIKHTIQNKLHRNAGPE 324 (412)
Q Consensus 288 pltrirdiahr~dip-----------~dlk~eikhtiqnklhr~agpe 324 (412)
-=+.|+|||.+-.|. .||-.++-..+.+.+.....+.
T Consensus 31 ~~~tv~~Ia~~agvs~~t~Y~~F~sK~~L~~~~~~~~~~~~~~~~~~~ 78 (177)
T 3kkc_A 31 SKITVQDVIGLANVGRSTFYSHYESKEVLLKELCEDLFHHLFKQGRDV 78 (177)
T ss_dssp TTCCHHHHHHHHCCCHHHHTTTCSSTHHHHHHHHHHHHHHHTSCCCCC
T ss_pred hHhhHHHHHHHhCCcHhhHHHHcCCHHHHHHHHHHHHHHHHHHHhccC
Confidence 346788888888887 5666666555555555444433
No 49
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=22.53 E-value=3e+02 Score=23.29 Aligned_cols=50 Identities=14% Similarity=0.474 Sum_probs=33.8
Q ss_pred EEEEEecCCceEEEEEEEEeCCCceEE--ecCC-----CceEEcCCCCeEEEEEEeCCC
Q 015140 53 LCDLEFKGGESIEYKFVIVRNDKSKAW--EAGD-----NRILKLPKGGSFEIVCHWNKT 104 (412)
Q Consensus 53 ~veV~lp~gt~~EYKYvI~d~~g~veW--E~G~-----NR~L~lp~~~s~~V~D~W~~~ 104 (412)
.+++..+.|. .|-|+|.+.++...| -.+. -+...++++...+..+.|.+.
T Consensus 33 ~v~l~f~Sgq--~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~ 89 (120)
T 3isy_A 33 AIEFQFSTGQ--KFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEV 89 (120)
T ss_dssp CEEEEESSSC--CEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSC
T ss_pred cEEEEeCCCC--EEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCC
Confidence 3467777765 577888886666655 3331 244667778888899999953
No 50
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=21.55 E-value=50 Score=30.27 Aligned_cols=68 Identities=15% Similarity=0.182 Sum_probs=52.1
Q ss_pred hhHHHHHHHhhhhcCCCCCcHHHHHHHHHHH----HHHHhhhccCChHHHHHHHhhhccHHHHHHHHHHHHh--hhccCc
Q 015140 325 DLVATEAMLAKITKNPGEYSESFVEQFKMFH----SELKDFFNAGSLAEQLDSIRESLDEQAASALSSFLEC--KKVSHC 398 (412)
Q Consensus 325 dl~ate~~l~r~~~~~g~y~~~fv~ef~~f~----~elk~ffna~~~~~~l~~~~~~~~~~~~~~~~~f~~~--k~~~~~ 398 (412)
.-..|+++|..++ ..-.+|+.-| ++|-..||-..|..+|...-...|+++..+..+|+.. ...||+
T Consensus 91 ~r~~l~~~l~~~~--------~L~~~~~~k~q~~~~~ls~~~sp~~L~~~L~~a~~e~eeeS~~l~~~F~~~~~e~dv~~ 162 (192)
T 2p22_C 91 QKDKVQALLENAR--------ILESKYVASWQDYHSEFSKKYGDIALKKKLEQNTKKLDEESSQLETTTRSIDSADDLDQ 162 (192)
T ss_dssp HHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCCHHHHHH
T ss_pred HHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchHHH
Confidence 3445777777766 4556667777 5555889999999999998888999999999999874 456666
Q ss_pred ch
Q 015140 399 FL 400 (412)
Q Consensus 399 ~~ 400 (412)
|+
T Consensus 163 Fl 164 (192)
T 2p22_C 163 FI 164 (192)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 51
>4fqn_A Malcavernin; helical domain, harmonin-homology domain, protein-protein interaction, HOMO-dimer, protein binding; 1.90A {Homo sapiens}
Probab=20.63 E-value=2e+02 Score=23.93 Aligned_cols=77 Identities=19% Similarity=0.325 Sum_probs=57.8
Q ss_pred hhHHHHHHHHHhhhhcccCCcchhHHHHHHHhhhhcCCCCCcHHHHHHHHHHHHHHHhhhccCChHHHHHHHhhhccHHH
Q 015140 303 HDLKLEIKHTIQNKLHRNAGPEDLVATEAMLAKITKNPGEYSESFVEQFKMFHSELKDFFNAGSLAEQLDSIRESLDEQA 382 (412)
Q Consensus 303 ~dlk~eikhtiqnklhr~agpedl~ate~~l~r~~~~~g~y~~~fv~ef~~f~~elk~ffna~~~~~~l~~~~~~~~~~~ 382 (412)
.++-|+---|+++|| .|+.|--.-++|.+-.. |-= ++.|..+|.+-|--.- -.+|-.||+-++++.
T Consensus 15 ~e~lqdYM~~L~~~L----~~~ElqqFA~Llr~YR~--G~~-------I~~Fc~kLl~LyG~~R-k~LL~gmRpFIp~~D 80 (98)
T 4fqn_A 15 TELLQDYMLTLRTKL----SSQEIQQFAALLHEYRN--GAS-------IHEFCINLRQLYGDSR-KFLLLGLRPFIPEKD 80 (98)
T ss_dssp HHHHHHHHHHHTTTS----CHHHHHHHHHHHHHHHT--TCC-------HHHHHHHHHHHHCGGG-GGGGGGGGGGSCHHH
T ss_pred HHHHHHHHHHHHhhc----ChHHHHHHHHHHHHHHc--CCC-------HHHHHHHHHHHhchHH-HHHHhhccCCCChhh
Confidence 356677778888887 79999999999988874 422 5556666666554332 236788999999999
Q ss_pred HHHHHHHHHhh
Q 015140 383 ASALSSFLECK 393 (412)
Q Consensus 383 ~~~~~~f~~~k 393 (412)
...-++|+|.-
T Consensus 81 i~~FesFle~i 91 (98)
T 4fqn_A 81 SQHFENFLETI 91 (98)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 99999999974
No 52
>2lm0_A AF4/FMR2 family member 1/protein AF-9 chimera; intrinsically disordered, nuclear protein; NMR {Homo sapiens}
Probab=20.47 E-value=1.1e+02 Score=26.54 Aligned_cols=55 Identities=25% Similarity=0.444 Sum_probs=41.5
Q ss_pred CCCCCcHHHHHHHHHHHHHHHhhhccCChHHHHHHHhh----------------hccHHHHHHHHHHHHhh
Q 015140 339 NPGEYSESFVEQFKMFHSELKDFFNAGSLAEQLDSIRE----------------SLDEQAASALSSFLECK 393 (412)
Q Consensus 339 ~~g~y~~~fv~ef~~f~~elk~ffna~~~~~~l~~~~~----------------~~~~~~~~~~~~f~~~k 393 (412)
..|.|+.++++|.+..++-+---=+-.-|-.-++=+++ +||..+..-|++|+++-
T Consensus 52 K~g~~~~~y~~~L~~l~~rim~l~d~~~lq~iv~li~~tG~~~it~~tfDFDLc~LD~~Tv~klq~~l~~~ 122 (125)
T 2lm0_A 52 KNGECDKAYLDELVELHRRLMTLRERHILQQIVNLIEETGHFHITNTTFDFDLCSLDKTTVRKLQSYLETS 122 (125)
T ss_dssp CCCCCSCSTHHHHHHHHHHHHTCCCCSSHHHHHHHHHTSCCEEECSSCEEECTTTSCHHHHHHHHHHTTSS
T ss_pred cCCcCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcCceeeecccccceeeccCHHHHHHHHHHHHhh
Confidence 34899999999999888877555444445544454554 79999999999999874
Done!