Citrus Sinensis ID: 015142

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410--
MASSVASKTFLAAPRTDGSLGSLLPDLRRQLPSPNVQILIRSRTPKKLQVKAAGSAFGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPIHVFVPNTDQRGHDYSEMSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGVSLISLPLSIKTNSHVGTTLPIVMYSLCFILLLWICSKPSFALLVLLPTR
cccccccccccccccccccccccccccccccccccEEEECccccccccEEEcccccccccEEEEccccccccccEEEECcccccccccHHHHHHHHccccccccccccccccccEEEEEccccccccccccEEEEEEcccccccccHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEccCEccccccccccccHHHHHccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEECccccccccccccccHHHHHHHccccccCEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccccccEEEEECccccccccccHHHHHHHHHHHHHHHHHccccccccccccc
************************************QILIRSRTPKKLQVKAAGSAFGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQS***TPRKETDTCKIYSGVSEGVTTGTPIHVFVPNTDQRGHDYSEMSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGVSLISLPLSIKTNSHVGTTLPIVMYSLCFILLLWICSKPSFALLVLLP**
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MASSVASKTFLAAPRTDGSLGSLLPDLRRQLPSPNVQILIRSRTPKKLQVKAAGSAFGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPIHVFVPNTDQRGHDYSEMSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGVSLISLPLSIKTNSHVGTTLPIVMYSLCFILLLWICSKPSFALLVLLPTR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Chorismate synthase, chloroplastic Catalyzes the last common step of the biosynthesis of aromatic amino acids, produced via the shikimic acid pathway.probableP27793
Chorismate synthase probableB7JVZ9
Chorismate synthase 1, chloroplastic Catalyzes the last common step of the biosynthesis of aromatic amino acids, produced via the shikimic acid pathway.probableQ42884

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
4.2.-.-Carbon-oxygen lyases.probable
4.2.3.-Acting on phosphates.probable
4.2.3.5Chorismate synthase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4ECD, chain A
Confidence level:very confident
Coverage over the Query: 59-140,161-189,213-309,335-357,377-403
View the alignment between query and template
View the model in PyMOL